Query 010107
Match_columns 518
No_of_seqs 306 out of 2226
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 20:03:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010107.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010107hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2r83_A Synaptotagmin-1; C2A-C2 100.0 5E-28 1.7E-32 241.8 23.3 201 1-228 43-246 (284)
2 1dqv_A Synaptotagmin III; beta 99.9 7.7E-28 2.6E-32 242.3 11.4 199 1-229 44-249 (296)
3 2z0u_A WW domain-containing pr 99.8 1.1E-18 3.7E-23 158.8 8.4 126 116-241 27-154 (155)
4 3rdl_A Protein kinase C alpha 99.7 2.4E-17 8.3E-22 145.9 12.4 124 116-244 2-126 (137)
5 3fdw_A Synaptotagmin-like prot 99.7 2.3E-17 7.8E-22 148.5 12.3 126 116-242 7-134 (148)
6 1ugk_A Synaptotagmin IV, KIAA1 99.7 9.4E-17 3.2E-21 142.6 14.0 112 116-230 6-120 (138)
7 2dmg_A KIAA1228 protein; beta- 99.7 4.2E-17 1.5E-21 145.5 11.7 126 116-243 8-136 (142)
8 2bwq_A Regulating synaptic mem 99.7 4.5E-17 1.5E-21 142.8 11.3 121 118-240 4-128 (129)
9 3fbk_A RGS3, RGP3, regulator o 99.7 9E-17 3.1E-21 145.5 12.9 126 116-244 11-139 (153)
10 1wfm_A Synaptotagmin XIII; C2 99.7 1.5E-16 5E-21 141.6 13.9 123 116-243 10-133 (138)
11 1v27_A Regulating synaptic mem 99.7 5.1E-17 1.7E-21 144.6 10.8 126 116-243 5-134 (141)
12 3f04_A Synaptotagmin-1; C2A, c 99.7 6.4E-17 2.2E-21 144.5 11.1 122 116-240 18-140 (143)
13 1rsy_A Synaptotagmin I; calciu 99.7 1E-16 3.5E-21 144.9 12.1 124 116-242 26-150 (152)
14 2d8k_A Synaptotagmin VII; exoc 99.7 9.9E-17 3.4E-21 143.0 11.8 124 116-242 10-135 (141)
15 2chd_A Rabphilin-3A, exophilin 99.7 6.5E-17 2.2E-21 144.3 10.6 121 116-240 13-136 (142)
16 2ep6_A MCTP2 protein; beta san 99.7 9.8E-17 3.3E-21 141.6 10.3 119 127-261 8-127 (133)
17 1a25_A CALB, protein kinase C 99.7 1.7E-16 5.9E-21 142.9 12.1 124 116-244 17-141 (149)
18 2cm5_A Rabphilin-3A; protein t 99.7 5.2E-17 1.8E-21 149.1 8.8 124 116-242 21-145 (166)
19 2q3x_A Regulating synaptic mem 99.7 2.6E-16 8.8E-21 145.3 12.9 122 116-243 16-140 (171)
20 3n5a_A Synaptotagmin-7; calciu 99.7 2.7E-16 9.4E-21 139.2 12.5 122 118-242 2-124 (138)
21 1rh8_A Piccolo protein; beta-s 99.7 6.7E-17 2.3E-21 144.2 8.4 123 116-242 4-138 (142)
22 1w15_A Synaptotagmin IV; metal 99.7 3.2E-16 1.1E-20 141.7 13.0 124 116-242 14-138 (153)
23 3b7y_A E3 ubiquitin-protein li 99.7 6E-16 2.1E-20 139.8 14.4 122 133-262 21-149 (153)
24 1tjx_A Similar to synaptotagmi 99.7 5.9E-16 2E-20 140.9 13.4 112 116-228 9-121 (159)
25 2enp_A B/K protein; C2 type 1, 99.7 3.4E-16 1.2E-20 140.6 11.5 125 116-244 10-142 (147)
26 2b3r_A Phosphatidylinositol-4- 99.6 7E-16 2.4E-20 136.6 11.8 116 124-241 12-129 (134)
27 3m7f_B E3 ubiquitin-protein li 99.6 2.1E-15 7.1E-20 139.7 14.6 123 133-263 9-138 (176)
28 2dmh_A Myoferlin; beta-sandwic 99.6 2.3E-15 7.7E-20 133.8 13.0 117 133-262 8-129 (140)
29 3pyc_A E3 ubiquitin-protein li 99.6 4.9E-15 1.7E-19 130.5 14.4 118 134-262 7-129 (132)
30 2r83_A Synaptotagmin-1; C2A-C2 99.6 1.1E-14 3.6E-19 145.0 17.5 138 117-261 4-142 (284)
31 3kwu_A MUNC13-1; calcium bindi 99.6 4.5E-15 1.5E-19 133.3 13.0 114 132-261 17-142 (148)
32 1dqv_A Synaptotagmin III; beta 99.6 1.2E-14 4.1E-19 145.8 17.2 160 116-291 4-166 (296)
33 1wfj_A Putative elicitor-respo 99.6 1.1E-14 3.8E-19 128.7 11.1 112 134-262 12-126 (136)
34 1rlw_A Phospholipase A2, CALB 99.5 9.1E-15 3.1E-19 127.4 8.6 92 133-230 4-99 (126)
35 2fk9_A Protein kinase C, ETA t 99.5 2E-14 6.8E-19 130.6 10.6 89 133-230 30-129 (157)
36 2nq3_A Itchy homolog E3 ubiqui 99.5 5.5E-14 1.9E-18 130.0 12.8 115 133-262 37-157 (173)
37 1gmi_A Protein kinase C, epsil 99.5 5.8E-14 2E-18 124.3 11.4 89 133-230 7-107 (136)
38 3b7y_A E3 ubiquitin-protein li 99.5 3.6E-13 1.2E-17 121.5 12.6 103 1-128 44-152 (153)
39 1rlw_A Phospholipase A2, CALB 99.4 8.8E-13 3E-17 114.7 9.3 95 1-128 30-124 (126)
40 3m7f_B E3 ubiquitin-protein li 99.4 2E-12 6.9E-17 119.5 12.2 105 1-130 32-142 (176)
41 2fk9_A Protein kinase C, ETA t 99.4 1.5E-12 5.1E-17 118.2 10.3 89 1-127 63-155 (157)
42 1gmi_A Protein kinase C, epsil 99.4 2.1E-12 7.1E-17 114.2 10.9 91 1-129 41-133 (136)
43 3jzy_A Intersectin 2; C2 domai 99.4 2E-12 6.9E-17 139.0 12.9 90 133-230 388-478 (510)
44 3nsj_A Perforin-1; pore formin 99.4 2.5E-12 8.5E-17 138.5 12.2 86 133-226 395-481 (540)
45 3kwu_A MUNC13-1; calcium bindi 99.3 1.2E-11 4.2E-16 110.7 11.7 105 1-127 41-145 (148)
46 2dmh_A Myoferlin; beta-sandwic 99.3 4.7E-12 1.6E-16 112.2 8.8 98 1-129 30-133 (140)
47 2nq3_A Itchy homolog E3 ubiqui 99.3 5.5E-12 1.9E-16 116.5 9.5 97 1-129 60-161 (173)
48 2ep6_A MCTP2 protein; beta san 99.3 5.8E-12 2E-16 110.7 8.2 95 1-128 37-131 (133)
49 1wfm_A Synaptotagmin XIII; C2 99.3 5.3E-12 1.8E-16 112.0 7.3 84 1-97 47-132 (138)
50 2b3r_A Phosphatidylinositol-4- 99.3 6.7E-12 2.3E-16 110.8 7.6 85 1-97 43-130 (134)
51 3l9b_A Otoferlin; C2-domain, b 99.2 3.8E-11 1.3E-15 105.6 11.2 113 134-263 23-137 (144)
52 2cjt_A UNC-13 homolog A, MUNC1 99.2 5.2E-11 1.8E-15 104.8 11.4 82 134-230 7-90 (131)
53 3pfq_A PKC-B, PKC-beta, protei 99.2 2.3E-11 7.9E-16 135.4 11.5 122 116-242 158-280 (674)
54 2q3x_A Regulating synaptic mem 99.2 1.9E-11 6.6E-16 112.5 8.9 85 1-98 55-140 (171)
55 3pyc_A E3 ubiquitin-protein li 99.2 3.8E-11 1.3E-15 105.4 10.1 98 1-126 29-130 (132)
56 1wfj_A Putative elicitor-respo 99.2 1.9E-11 6.4E-16 107.7 7.9 96 1-130 34-131 (136)
57 2z0u_A WW domain-containing pr 99.2 1.1E-11 3.9E-16 112.3 6.2 85 1-96 67-154 (155)
58 3fdw_A Synaptotagmin-like prot 99.2 1.2E-11 4.2E-16 110.8 6.2 86 1-98 48-135 (148)
59 3f04_A Synaptotagmin-1; C2A, c 99.2 2.8E-11 9.7E-16 107.6 7.9 83 1-97 58-142 (143)
60 2chd_A Rabphilin-3A, exophilin 99.2 2.5E-11 8.6E-16 107.8 7.0 85 1-97 53-140 (142)
61 1ugk_A Synaptotagmin IV, KIAA1 99.2 8.5E-11 2.9E-15 103.9 9.2 83 1-97 47-133 (138)
62 3rdl_A Protein kinase C alpha 99.1 4.4E-11 1.5E-15 105.3 7.0 84 1-97 40-124 (137)
63 1rsy_A Synaptotagmin I; calciu 99.1 5.5E-11 1.9E-15 107.0 7.7 83 1-97 66-150 (152)
64 2enp_A B/K protein; C2 type 1, 99.1 2.8E-11 9.5E-16 108.3 5.5 83 1-97 57-141 (147)
65 1a25_A CALB, protein kinase C 99.1 4.7E-11 1.6E-15 107.1 7.0 84 1-97 55-139 (149)
66 2bwq_A Regulating synaptic mem 99.1 5.3E-11 1.8E-15 103.7 6.5 83 1-96 42-129 (129)
67 1djx_A PLC-D1, phosphoinositid 99.1 1.9E-10 6.4E-15 126.4 12.3 106 133-244 498-607 (624)
68 1cjy_A CPLA2, protein (cytosol 99.1 4.2E-11 1.4E-15 133.0 7.0 102 133-240 19-124 (749)
69 2d8k_A Synaptotagmin VII; exoc 99.1 9.7E-11 3.3E-15 103.9 7.8 83 1-97 50-135 (141)
70 2cjs_A UNC-13 homolog A, MUNC1 99.1 1.4E-10 4.9E-15 106.3 8.8 82 134-230 16-99 (167)
71 2dmg_A KIAA1228 protein; beta- 99.1 3.7E-11 1.3E-15 106.7 4.2 86 1-97 47-135 (142)
72 1rh8_A Piccolo protein; beta-s 99.1 1.2E-11 4.1E-16 109.9 1.0 86 1-97 42-138 (142)
73 3fbk_A RGS3, RGP3, regulator o 99.1 8.4E-11 2.9E-15 106.0 6.6 85 1-97 50-137 (153)
74 3n5a_A Synaptotagmin-7; calciu 99.1 5E-10 1.7E-14 98.5 9.8 71 1-83 40-112 (138)
75 1v27_A Regulating synaptic mem 99.1 5.7E-11 1.9E-15 105.2 3.5 84 1-97 45-133 (141)
76 1w15_A Synaptotagmin IV; metal 99.0 4.5E-10 1.5E-14 101.0 9.1 70 1-82 54-125 (153)
77 1tjx_A Similar to synaptotagmi 99.0 6.5E-10 2.2E-14 100.7 10.2 85 1-97 49-147 (159)
78 2cm5_A Rabphilin-3A; protein t 99.0 7.4E-10 2.5E-14 101.1 8.8 71 1-83 61-133 (166)
79 3jzy_A Intersectin 2; C2 domai 99.0 6.7E-10 2.3E-14 119.3 8.4 91 1-126 411-505 (510)
80 3nsj_A Perforin-1; pore formin 98.9 1.5E-09 5E-14 117.0 9.4 74 1-95 417-491 (540)
81 3bxj_A RAS GTPase-activating p 98.8 7.1E-10 2.4E-14 118.5 -0.5 99 133-244 12-118 (483)
82 2cjt_A UNC-13 homolog A, MUNC1 98.7 3.5E-08 1.2E-12 86.5 7.6 66 17-95 34-102 (131)
83 1djx_A PLC-D1, phosphoinositid 98.7 4.7E-08 1.6E-12 107.3 10.3 82 1-97 523-605 (624)
84 1cjy_A CPLA2, protein (cytosol 98.7 1.3E-08 4.5E-13 113.0 5.5 82 1-97 45-126 (749)
85 3l9b_A Otoferlin; C2-domain, b 98.7 7.5E-08 2.6E-12 84.7 9.2 92 15-131 48-142 (144)
86 3ohm_B 1-phosphatidylinositol- 98.6 9.5E-08 3.2E-12 107.8 10.7 98 134-244 727-828 (885)
87 2cjs_A UNC-13 homolog A, MUNC1 98.6 7.8E-08 2.7E-12 88.0 6.9 57 17-86 43-100 (167)
88 2zkm_X 1-phosphatidylinositol- 98.5 2E-07 6.7E-12 105.0 10.4 97 134-243 680-781 (799)
89 3qr0_A Phospholipase C-beta (P 98.5 5.5E-07 1.9E-11 101.1 11.6 98 134-244 652-754 (816)
90 3bxj_A RAS GTPase-activating p 98.4 3.7E-08 1.3E-12 105.2 0.3 83 1-97 30-116 (483)
91 4hqo_A Sporozoite surface prot 98.3 4.4E-06 1.5E-10 82.0 12.6 155 280-460 18-177 (266)
92 4hqf_A Thrombospondin-related 98.3 1.4E-05 4.8E-10 78.9 16.1 155 280-460 21-180 (281)
93 3n2n_F Anthrax toxin receptor 98.3 1E-05 3.4E-10 74.1 13.7 150 280-459 7-158 (185)
94 1shu_X Anthrax toxin receptor 98.2 9.1E-06 3.1E-10 74.2 12.5 149 280-460 6-156 (182)
95 2xgg_A Microneme protein 2; A/ 98.2 1.3E-05 4.4E-10 73.4 11.6 141 280-449 17-162 (178)
96 1n3y_A Integrin alpha-X; alpha 98.1 9.6E-06 3.3E-10 75.2 10.6 150 280-460 9-167 (198)
97 3pfq_A PKC-B, PKC-beta, protei 98.1 1.2E-06 4E-11 97.5 4.3 84 1-97 196-280 (674)
98 1q0p_A Complement factor B; VO 98.1 1.4E-05 4.9E-10 75.3 11.1 158 278-461 13-193 (223)
99 1yrk_A NPKC-delta, protein kin 98.1 1.5E-05 5E-10 68.2 9.5 89 1-128 30-124 (126)
100 2enj_A NPKC-theta, protein kin 98.1 1E-05 3.4E-10 70.1 8.4 89 1-128 35-129 (138)
101 3ohm_B 1-phosphatidylinositol- 98.1 3.9E-06 1.3E-10 94.8 7.4 78 1-97 745-826 (885)
102 2b2x_A Integrin alpha-1; compu 98.1 8E-05 2.7E-09 70.6 15.3 137 280-449 22-164 (223)
103 1mf7_A Integrin alpha M; cell 98.1 3.1E-06 1.1E-10 78.5 5.2 149 280-459 5-162 (194)
104 4fx5_A VON willebrand factor t 98.0 5.6E-05 1.9E-09 80.0 15.1 156 278-460 75-232 (464)
105 3qr0_A Phospholipase C-beta (P 98.0 1.1E-05 3.6E-10 90.7 9.7 79 1-97 670-752 (816)
106 3ibs_A Conserved hypothetical 98.0 5.3E-05 1.8E-09 71.2 13.0 141 279-449 10-150 (218)
107 1ijb_A VON willebrand factor; 98.0 2.6E-05 8.8E-10 73.0 10.7 147 280-458 13-167 (202)
108 2zkm_X 1-phosphatidylinositol- 98.0 9.2E-06 3.2E-10 91.4 8.3 78 1-97 698-780 (799)
109 1v7p_C Integrin alpha-2; snake 98.0 6.9E-05 2.4E-09 69.7 12.6 136 280-448 6-147 (200)
110 1pt6_A Integrin alpha-1; cell 97.9 0.00018 6.1E-09 67.6 14.3 137 280-449 7-149 (213)
111 4b4t_W RPN10, 26S proteasome r 97.9 0.00025 8.5E-09 69.3 15.1 147 283-458 6-158 (268)
112 2x5n_A SPRPN10, 26S proteasome 97.9 0.00035 1.2E-08 65.0 15.3 167 282-488 4-175 (192)
113 1atz_A VON willebrand factor; 97.8 0.00016 5.5E-09 66.5 12.2 147 280-460 5-158 (189)
114 2x31_A Magnesium-chelatase 60 97.7 5.2E-06 1.8E-10 76.5 0.2 146 280-458 5-161 (189)
115 2odp_A Complement C2; C3/C5 co 97.7 0.00015 5E-09 77.5 11.3 156 277-461 6-187 (509)
116 3hrz_D Complement factor B; se 97.6 0.00039 1.3E-08 77.7 13.9 155 277-460 240-420 (741)
117 1rrk_A Complement factor B; BB 97.5 0.00048 1.6E-08 73.1 12.2 156 281-461 2-179 (497)
118 3zqk_A VON willebrand factor; 97.5 0.00018 6.1E-09 67.0 7.4 143 279-459 20-169 (199)
119 1mjn_A Integrin alpha-L; rossm 97.5 0.00014 4.7E-09 66.6 6.2 143 280-458 2-151 (179)
120 1yrk_A NPKC-delta, protein kin 97.4 0.0015 5.3E-08 55.7 10.8 70 152-231 26-97 (126)
121 3k6s_A Integrin alpha-X; cell 97.3 0.00038 1.3E-08 81.1 9.2 150 280-460 130-288 (1095)
122 2enj_A NPKC-theta, protein kin 97.2 0.0015 5.1E-08 56.6 9.5 70 152-231 31-102 (138)
123 1jey_B KU80; double-strand DNA 96.2 0.025 8.7E-07 61.1 12.0 153 277-449 4-170 (565)
124 1jey_A KU70; double-strand DNA 96.1 0.029 1E-06 61.2 11.9 156 281-452 36-212 (609)
125 1yvr_A RO autoantigen, 60-kDa 95.2 0.16 5.3E-06 54.5 13.1 138 278-452 366-507 (538)
126 2nvo_A RO sixty-related protei 94.8 0.086 2.9E-06 56.6 9.7 136 278-450 360-501 (535)
127 2ww8_A RRGA, cell WALL surface 80.3 6.4 0.00022 44.6 10.4 42 380-423 351-392 (893)
128 2iue_A Pactolus I-domain; memb 76.6 7.7 0.00026 36.0 8.1 112 280-424 3-119 (212)
129 3rag_A Uncharacterized protein 71.0 3 0.0001 39.6 3.8 42 409-450 9-50 (242)
130 3fcs_B Integrin beta-3; beta p 67.4 7 0.00024 42.9 6.3 51 370-422 200-255 (690)
131 3l4c_A Dedicator of cytokinesi 62.9 16 0.00054 34.1 6.8 43 13-55 75-119 (220)
132 3l4c_A Dedicator of cytokinesi 60.6 1.1E+02 0.0036 28.5 12.0 60 168-227 75-139 (220)
133 2wxf_A Phosphatidylinositol-4, 59.8 29 0.00099 39.5 9.6 92 133-229 218-325 (940)
134 3hhm_A Phosphatidylinositol-4, 55.7 49 0.0017 38.1 10.6 93 133-229 355-456 (1091)
135 1e7u_A Phosphatidylinositol 3- 53.0 54 0.0018 37.3 10.4 76 152-229 237-331 (961)
136 3k6s_B Integrin beta-2; cell r 47.1 9.5 0.00033 41.8 3.0 16 277-292 101-116 (687)
137 3rag_A Uncharacterized protein 45.9 58 0.002 30.7 7.9 103 270-401 121-227 (242)
138 3t3p_B Integrin beta-3; integr 30.1 59 0.002 33.8 5.5 50 370-421 200-254 (472)
139 2y3a_A Phosphatidylinositol-4, 26.9 48 0.0017 38.2 4.6 91 134-229 355-471 (1092)
140 2yrb_A Protein fantom; beta sa 24.7 89 0.003 27.3 4.9 59 17-88 56-121 (156)
141 3l6u_A ABC-type sugar transpor 23.9 2.6E+02 0.009 25.6 8.7 92 387-487 22-114 (293)
No 1
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.96 E-value=5e-28 Score=241.77 Aligned_cols=201 Identities=19% Similarity=0.306 Sum_probs=165.0
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++....+ +..||+++++|+||+|+|+|.+.+.+++. +.|+|+|||.|. ++++++||++.+
T Consensus 43 yv~v~~~~~~~---~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~-----------~~~~~~lG~~~i 108 (284)
T 2r83_A 43 YVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR-----------FSKHDIIGEFKV 108 (284)
T ss_dssp EEEEEEETCTT---SCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS-----------SSCCCEEEEEEE
T ss_pred EEEEEEEcCCC---ceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC-----------CCCCceeEEEEE
Confidence 57788765333 26789999999999999999999876643 699999999994 468999999999
Q ss_pred eccccccccceeEEEeccCCcccccccccCCCCCCCCcccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEE
Q 010107 79 TLSQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLV 158 (518)
Q Consensus 79 ~L~~l~~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~ 158 (518)
+|.++........|++|... ... .....|.|.+.+++.+....+.+.+++|++|+.+|.+|.+|||++
T Consensus 109 ~l~~l~~~~~~~~w~~L~~~----------~~~--~~~~~G~i~l~l~~~p~~~~l~v~v~~a~~L~~~d~~~~~dpyv~ 176 (284)
T 2r83_A 109 PMNTVDFGHVTEEWRDLQSA----------EKE--EQEKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVK 176 (284)
T ss_dssp EGGGCCCSSCEEEEEECBCC----------SSC--CCCCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEE
T ss_pred cchhcccCCcceeEEEeecc----------ccc--cccccccEEEEEEecCcCCceEEEEEEeECCCCcCCCCCcCeEEE
Confidence 99999887778889999652 100 114579999999998887888888899999999999999999999
Q ss_pred EEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecCCCCCcceEEEEEechhh
Q 010107 159 ISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADL 228 (518)
Q Consensus 159 i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L 228 (518)
+++.+ ++.+..++||+++++|+||.|++ |.+.+..-.-....|.|+|||+|..+++++||++.+++..+
T Consensus 177 v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 246 (284)
T 2r83_A 177 IHLMQ-NGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 246 (284)
T ss_dssp EEEEE-TTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCC
T ss_pred EEEEe-CCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCC
Confidence 99975 36667789999999999999999 55544321001457999999999999999999999999763
No 2
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.95 E-value=7.7e-28 Score=242.31 Aligned_cols=199 Identities=21% Similarity=0.357 Sum_probs=159.2
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCcee--EEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQ--TLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q--~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++....+ +..||+++++|+||+|+++|.|.+.+++.+ .|+|+|||.|. ++++++||++.+
T Consensus 44 yv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~-----------~~~~~~iG~~~i 109 (296)
T 1dqv_A 44 YVKIYLLPDRK---KKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDR-----------FSRHDLIGQVVL 109 (296)
T ss_dssp EEEEECTTSTT---SCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECCS-----------SSCCCEEEEEEC
T ss_pred EEEEEEEcCCC---eeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcCC-----------CCCCceEEEEEe
Confidence 46777643222 467999999999999999999998777644 89999999994 568999999999
Q ss_pred e-cccccc-ccceeEEEeccCCcccccccccCCCCCCCCcccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcE
Q 010107 79 T-LSQIVT-RKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPF 156 (518)
Q Consensus 79 ~-L~~l~~-~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPy 156 (518)
+ |.++.. ......|.+|... .+ .....|+|.+.+.+.+..+.+.+.+++|++|+.+|.+|.+|||
T Consensus 110 ~~l~~~~~~~~~~~~w~~L~~~-----------~~--~~~~~G~i~vsl~y~~~~~~l~v~v~~a~~L~~~d~~g~~Dpy 176 (296)
T 1dqv_A 110 DNLLELAEQPPDRPLWRDILEG-----------GS--EKADLGELNFSLCYLPTAGLLTVTIIKASNLKAMDLTGFSDPY 176 (296)
T ss_dssp CCTTGGGSSCSSCCCCEECBCC-----------SS--CCSCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSSCCCEE
T ss_pred ccccccccCCccceeeeccccc-----------cc--cccccceEEEEEEeccccceeEEEEEEeecCCccCCCCCCCcE
Confidence 5 556654 2345678888551 11 1245799999999988877788889999999999999999999
Q ss_pred EEEEEEecCCceeeEeeeccccCCCCCceee-eEEeee--ccCCCCccEEEEEEeecCCCCCcceEEEEEechhhh
Q 010107 157 LVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ--QVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLE 229 (518)
Q Consensus 157 v~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~--~l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~ 229 (518)
+++++.. ++++..++||+++++++||.||+ |.+.+. .+ ....|.|+|||+|..+++++||.+.+++.++.
T Consensus 177 v~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l--~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~ 249 (296)
T 1dqv_A 177 VKASLIS-EGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESV--ENVGLSIAVVDYDCIGHNEVIGVCRVGPEAAD 249 (296)
T ss_dssp EEECCCT-TCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGG--GSCCCCCEEEECCSSSCCEEEEECCCSSCTTC
T ss_pred EEEEEEe-CCcCccceecceecCCCCCeECceEEEEcCHHHc--cCcEEEEEEEeCCCCCCCceEEEEEECCccCC
Confidence 9999874 45556789999999999999999 444332 22 14679999999999999999999999998773
No 3
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.75 E-value=1.1e-18 Score=158.85 Aligned_cols=126 Identities=13% Similarity=0.134 Sum_probs=101.2
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
...|+|.+++.|......+.+.+++|++|+++|.+|++|||+++++.+.++....++||+++++|+||+||| |.|.+..
T Consensus 27 ~~~G~l~~sl~y~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~ 106 (155)
T 2z0u_A 27 VGATRIQIALKYDEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSY 106 (155)
T ss_dssp -CCEEEEEEEEEETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCH
T ss_pred CCcEEEEEEEEEcCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCH
Confidence 457999999999888888888899999999999999999999999986444445589999999999999999 6555432
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhhhh-ccCCCceEEee
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEK-LHSSGQGQNLF 241 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~-~~~~~~~~~l~ 241 (518)
-.-..+.|.|+|||+|..+++++||++.+++.++.. ......|+.|.
T Consensus 107 ~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 107 PALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp HHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred HHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 100146899999999999999999999999999842 12223455553
No 4
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.72 E-value=2.4e-17 Score=145.91 Aligned_cols=124 Identities=17% Similarity=0.330 Sum_probs=100.6
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
..+|+|.+++++ ..+.+.+.+++|++|+.+|.+|++|||+++++.+ ++.....++|+++++++||.|++ |.+.+..
T Consensus 2 ~~~G~l~~~l~~--~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 78 (137)
T 3rdl_A 2 EKRGRIYLKAEV--TDEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIP-DPKNESKQKTKTIRSTLNPQWNESFTFKLKP 78 (137)
T ss_dssp CCCCEEEEEEEE--ETTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEC-CTTCCCCEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CcceEEEEEEEE--cCCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEc-CCCCCeeecCceEcCCCCCCcccEEEEEcCc
Confidence 347999999998 4567777789999999999999999999999864 34445689999999999999998 6666543
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeeccc
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 244 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~ 244 (518)
. +..+.|.|+|||++..+++++||++.+++.++... ....++.|.+.+
T Consensus 79 ~-~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~ 126 (137)
T 3rdl_A 79 S-DKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKM-PASGWYKLLNQE 126 (137)
T ss_dssp G-GGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHS-CEEEEEECBCHH
T ss_pred h-hcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccC-ccCceEECcCcc
Confidence 1 23468999999999999999999999999999753 344567776543
No 5
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.72 E-value=2.3e-17 Score=148.52 Aligned_cols=126 Identities=11% Similarity=0.184 Sum_probs=102.2
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCC-CCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeee
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKD-LFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ 193 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d-~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~ 193 (518)
..+|+|.+++++....+.+.+.+++|++|+.+| .++++||||++++.+ ++.....+||+++++|+||.|++ |.+.+.
T Consensus 7 ~~~G~l~~sl~y~~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 85 (148)
T 3fdw_A 7 FVTGRIAFSLKYEQQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLP-DKSRQGKRKTSIKRDTVNPLYDETLRYEIP 85 (148)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEET-CCSGGGEEECCCCSSCSSCEEEEEEEEECC
T ss_pred ccceEEEEEEEEeCCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEc-CCcccCccccccCCCCCCCcEeeEEEEEeC
Confidence 558999999999988888889999999999998 689999999999874 34445689999999999999999 555543
Q ss_pred ccCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeec
Q 010107 194 QVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 242 (518)
Q Consensus 194 ~l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n 242 (518)
.-.-....|.|+|||+|..+++++||++.++|.++........+++|..
T Consensus 86 ~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 134 (148)
T 3fdw_A 86 ESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHG 134 (148)
T ss_dssp STTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBC
T ss_pred hhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcC
Confidence 2111245799999999999999999999999999976443444566543
No 6
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.71 E-value=9.4e-17 Score=142.65 Aligned_cols=112 Identities=21% Similarity=0.288 Sum_probs=94.0
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCC-CCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEe-e
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLF-SRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLN-I 192 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~-g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~-~ 192 (518)
..+|+|.++++|......+.+.+++|++|+.+|.+ +++||||++++.++ + ...+||+++++++||+|+| |.|. +
T Consensus 6 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~-~--~~~~kT~v~~~t~nP~wne~f~f~~v 82 (138)
T 1ugk_A 6 SGLGTLFFSLEYNFERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPE-K--KHKVKTRVLRKTLDPAFDETFTFYGI 82 (138)
T ss_dssp CCCCEEEEEEEEEGGGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETT-T--CSEEECCCCSSCSSCEEEEEEEEECC
T ss_pred CccEEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecC-C--CceEecCcCcCCCCCcEeeEEEEcCc
Confidence 45799999999998888888889999999999986 89999999998743 2 2589999999999999998 5543 2
Q ss_pred eccCCCCccEEEEEEeecCCCCCcceEEEEEechhhhh
Q 010107 193 QQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEK 230 (518)
Q Consensus 193 ~~l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~ 230 (518)
..-.-....|.|+|||+|..+++++||++.++|.++..
T Consensus 83 ~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~ 120 (138)
T 1ugk_A 83 PYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIEL 120 (138)
T ss_dssp CSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCC
T ss_pred CHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccC
Confidence 21010246899999999999999999999999999965
No 7
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.71 E-value=4.2e-17 Score=145.53 Aligned_cols=126 Identities=17% Similarity=0.155 Sum_probs=99.9
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
..+|+|.+++++....+.+.+.+++|++|+.+|.+| +||||++++.++ +.....+||+++++|+||+|+| |.|.+..
T Consensus 8 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 85 (142)
T 2dmg_A 8 SPLGQIQLTIRHSSQRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPD-KRRSGRRKTHVSKKTLNPVFDQSFDFSVSL 85 (142)
T ss_dssp CSSCEEEEEEEEETTTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESC-CCSSSCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred CCcceEEEEEEEeCCCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcC-CCCCCcccCCccCCCCCCCcCceEEEEecH
Confidence 557999999999888888888899999999999999 999999999753 4345689999999999999998 6555422
Q ss_pred cCCCCccEEEEEEeecCCCC--CcceEEEEEechhhhhccCCCceEEeecc
Q 010107 195 VGSKDSPLIIECFNFNSNGK--HDLIGKVQKSLADLEKLHSSGQGQNLFLS 243 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~--~d~IG~~~i~l~~L~~~~~~~~~~~l~n~ 243 (518)
-.-....|.|+|||++..++ +++||++.+++.++........++.|...
T Consensus 86 ~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~ 136 (142)
T 2dmg_A 86 PEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTED 136 (142)
T ss_dssp HHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCS
T ss_pred HHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCC
Confidence 10013589999999998764 47999999999998653334456666553
No 8
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=4.5e-17 Score=142.78 Aligned_cols=121 Identities=14% Similarity=0.186 Sum_probs=94.1
Q ss_pred cceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeecc-
Q 010107 118 CGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV- 195 (518)
Q Consensus 118 ~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l- 195 (518)
+|+|.++++|....+.+.+.+++|++|+.+|.+|++|||+++++.++ +.....+||+++++|+||.|+| |.+.....
T Consensus 4 ~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~ 82 (129)
T 2bwq_A 4 SGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD-RSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRR 82 (129)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESS-CSGGGEEECCCCSSBSSCEEEEEEEECSCCGG
T ss_pred eEEEEEEEEEccCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecC-CCCCcceecccccCCCCCccccEEEEccCCHH
Confidence 69999999999888888888999999999999999999999998753 3345789999999999999998 65553211
Q ss_pred CCCCccEEEEEEeecCCCC--CcceEEEEEechhhhhccCCCceEEe
Q 010107 196 GSKDSPLIIECFNFNSNGK--HDLIGKVQKSLADLEKLHSSGQGQNL 240 (518)
Q Consensus 196 ~~~~~~L~veV~D~d~~~~--~d~IG~~~i~l~~L~~~~~~~~~~~l 240 (518)
......|.|+|||++..++ +++||++.+++.++.. .+...|++|
T Consensus 83 ~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~-~~~~~W~~L 128 (129)
T 2bwq_A 83 EFRERMLEITLWDQARVREEESEFLGEILIELETALL-DDEPHWYKL 128 (129)
T ss_dssp GGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCC-SSCEEEEEC
T ss_pred HhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCC-CcCCccEEC
Confidence 1125789999999999887 9999999999999864 233344543
No 9
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.70 E-value=9e-17 Score=145.53 Aligned_cols=126 Identities=19% Similarity=0.220 Sum_probs=99.7
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
...|++.+++.|....+.+.+.+++|++|+.+| +|.+||||++++.++ +.....+||+++++|+||.|+| |.+.+..
T Consensus 11 ~~~G~~~lsL~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 88 (153)
T 3fbk_A 11 KVQGAGQLRLSIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPE-DSRLRHQKTQTVPDCRDPAFHEHFFFPVQE 88 (153)
T ss_dssp --CCCCEEEEEEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESC-SCCTTCEECCCCTTCSSCEEEEEEEEECCG
T ss_pred CCCCEEEEEEEEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcC-CCCccEEeccccCCCCCCccccEEEEeccc
Confidence 457999999999998888889999999999999 699999999998753 3345689999999999999999 6655522
Q ss_pred cCCCCccEEEEEEeecCCCC-CcceEEEEEechhhhh-ccCCCceEEeeccc
Q 010107 195 VGSKDSPLIIECFNFNSNGK-HDLIGKVQKSLADLEK-LHSSGQGQNLFLST 244 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~-~d~IG~~~i~l~~L~~-~~~~~~~~~l~n~~ 244 (518)
.+....|.|+|||++..++ +++||++.+++.+|.. ......++.|....
T Consensus 89 -~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 89 -EDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp -GGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred -HHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 2234569999999999876 8999999999999974 22223456665533
No 10
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=1.5e-16 Score=141.63 Aligned_cols=123 Identities=15% Similarity=0.116 Sum_probs=98.2
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
...|+|++++.|......+.+.+++|+ ++|.+|.+||||++++.++++ ...+||+++++|+||+|+| |.|.+..
T Consensus 10 ~~~G~l~~sl~y~~~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~--~~~~kT~v~~~tlnP~wnE~f~f~v~~ 84 (138)
T 1wfm_A 10 NQAPKLHYCLDYDCQKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTG--SVEAQTALKKRQLHTTWEEGLVLPLAE 84 (138)
T ss_dssp SSCCEEEEEEEEETTTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTE--EEEEECCCCCCCSSEECSSCEEEECCT
T ss_pred CcceEEEEEEEEeCCCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCC--cccEecccCcCCCCCcCCceEEEEecH
Confidence 457999999999888888888889999 468899999999999976432 4578999999999999998 6655432
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeecc
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLS 243 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~ 243 (518)
-.-....|.|+|||+|..+++++||++.++|.++........|++|..+
T Consensus 85 ~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 85 EELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp TSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 1112578999999999999999999999999999633333456666554
No 11
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.70 E-value=5.1e-17 Score=144.57 Aligned_cols=126 Identities=13% Similarity=0.163 Sum_probs=101.9
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
..+|+|.++++|......+.+.+++|++|+.+|.++++|||+++++.++ +.....+||+++++|+||+|+| |.|....
T Consensus 5 ~~~G~i~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~~kT~~~~~t~nP~wne~f~f~~~~ 83 (141)
T 1v27_A 5 SSGGQLSIKLWFDKVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPD-RSDKNKRRTKTVKKTLEPKWNQTFIYSPVH 83 (141)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSC-CSSSSCCBCCCCSSCSSCCCCCCCEECSCC
T ss_pred CcccEEEEEEEEeCCCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecC-CCCCcceeCccccCCCCCccccEEEEccCC
Confidence 5589999999999888888888999999999999999999999998643 3345689999999999999998 6655311
Q ss_pred c-CCCCccEEEEEEeecCCCC--CcceEEEEEechhhhhccCCCceEEeecc
Q 010107 195 V-GSKDSPLIIECFNFNSNGK--HDLIGKVQKSLADLEKLHSSGQGQNLFLS 243 (518)
Q Consensus 195 l-~~~~~~L~veV~D~d~~~~--~d~IG~~~i~l~~L~~~~~~~~~~~l~n~ 243 (518)
. ......|.|+|||++..++ +++||++.+++.++.. .+...|++|...
T Consensus 84 ~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~-~~~~~W~~L~~~ 134 (141)
T 1v27_A 84 RREFRERMLEITLWDQARVREEESEFLGEILIELETALL-DDEPHWYKLQTH 134 (141)
T ss_dssp TTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCC-SSEEEEEECBCC
T ss_pred HHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCC-CCCCceEECccc
Confidence 1 1125789999999999887 9999999999999864 333456666553
No 12
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.69 E-value=6.4e-17 Score=144.55 Aligned_cols=122 Identities=16% Similarity=0.318 Sum_probs=98.9
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
...|+|.+++++....+.+.+.+++|++|+.+|.++++|||+++++.+++ ...+||+++++++||.|+| |.+.+..
T Consensus 18 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~ 94 (143)
T 3f04_A 18 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDK---KKKFETKVHRKTLNPVFNEQFTFKVPY 94 (143)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCC---SCCEECCCCCSCSSCEEEEEEEECCCH
T ss_pred cCeEEEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCC---CccEECccCcCCCCCcCcCeEEEeecH
Confidence 45799999999998888888889999999999999999999999997542 2479999999999999999 5555432
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEe
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNL 240 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l 240 (518)
-.-....|.|+|||++..+++++||++.++|.++........+++|
T Consensus 95 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L 140 (143)
T 3f04_A 95 SELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDL 140 (143)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEEC
T ss_pred hhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEEC
Confidence 1112478999999999999999999999999999653222334544
No 13
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=1e-16 Score=144.94 Aligned_cols=124 Identities=16% Similarity=0.297 Sum_probs=99.9
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
...|+|.+++.|......+.+.+++|++|+.+|.++.+||||++++.++ + ...+||+++++++||.|+| |.|.+..
T Consensus 26 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~--~~~~kT~v~~~t~nP~wne~f~f~v~~ 102 (152)
T 1rsy_A 26 EKLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPD-K--KKKFETKVHRKTLNPVFNEQFTFKVPY 102 (152)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETT-C--CSCEECCCCTTCSSCEEEEEEEECCCH
T ss_pred CCceEEEEEEEEeCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcC-C--CceEeccccCCCCCCcCcccEEEeecH
Confidence 4579999999998888888888999999999999999999999999743 2 2478999999999999999 5555432
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeec
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 242 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n 242 (518)
-.-....|.|+|||++..+++++||++.+++.++........|++|.+
T Consensus 103 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 103 SELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp HHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred HHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 100257899999999999999999999999999954222234566644
No 14
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.69 E-value=9.9e-17 Score=143.03 Aligned_cols=124 Identities=18% Similarity=0.300 Sum_probs=99.3
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
..+|+|.+++.|......+.+.+++|++|+.+|.+|++||||++++.++. ...+||+++++++||.|+| |.|....
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~t~nP~wne~f~f~~~~ 86 (141)
T 2d8k_A 10 ENLGRIQFSVGYNFQESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDK---KHKLETKVKRKNLNPHWNETFLFEGFP 86 (141)
T ss_dssp CCCCEEEEEEEECSSSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCC---SSEEECCCCTTCSSCCCCEEEEECSCC
T ss_pred ceeeEEEEEEEEeCCCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCC---CccEeCceEcCCCCCccccEEEECccC
Confidence 45899999999988888888889999999999999999999999997532 2478999999999999999 5544211
Q ss_pred cC-CCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeec
Q 010107 195 VG-SKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 242 (518)
Q Consensus 195 l~-~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n 242 (518)
.. -....|.|+|||++..+++++||++.+++.++........+++|..
T Consensus 87 ~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 87 YEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp HHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEE
T ss_pred HHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcC
Confidence 10 1257899999999999999999999999999965332234555543
No 15
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.69 E-value=6.5e-17 Score=144.33 Aligned_cols=121 Identities=19% Similarity=0.298 Sum_probs=98.2
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEe-ee
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLN-IQ 193 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~-~~ 193 (518)
..+|+|.+++.+......+.+.+++|++|+.+|.+|.+||||++++.+ ++.+...+||+++++++||.|++ |.+. +.
T Consensus 13 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~ 91 (142)
T 2chd_A 13 TTLGALEFSLLYDQDNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLP-GASKSNKLRTKTLRNTRNPVWNETLQYHGIT 91 (142)
T ss_dssp -CCCEEEEEEEEEGGGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEES-CCSGGGEEECCCCCSCSSCEEEEEEEEESCC
T ss_pred CccceEEEEEEEeCCCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEc-CCCCcceeeCCcCCCCCCCcCcCEEEEcccC
Confidence 558999999999888888888899999999999999999999999974 34445689999999999999999 5444 21
Q ss_pred ccCCC-CccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEe
Q 010107 194 QVGSK-DSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNL 240 (518)
Q Consensus 194 ~l~~~-~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l 240 (518)
. .+. ...|.|+|||++..+++++||++.+++.++.. +....|.+
T Consensus 92 ~-~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~--~~~~~~~~ 136 (142)
T 2chd_A 92 E-EDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKA--NQRKNFNI 136 (142)
T ss_dssp H-HHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCT--TCCEEEEE
T ss_pred H-HHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCC--CCccEEEE
Confidence 1 111 36899999999999999999999999999964 33444444
No 16
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.68 E-value=9.8e-17 Score=141.62 Aligned_cols=119 Identities=16% Similarity=0.281 Sum_probs=94.3
Q ss_pred eeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEE
Q 010107 127 ECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIE 205 (518)
Q Consensus 127 ~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~ve 205 (518)
+....+.+.+.+++|++|+.+|.+|++||||++++.+ ..+||+++++++||.|+| |.+.+. +....|.|+
T Consensus 8 ~~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~wne~f~f~~~---~~~~~l~i~ 78 (133)
T 2ep6_A 8 DVKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGN------DRLQTHTVYKNLNPEWNKVFTFPIK---DIHDVLEVT 78 (133)
T ss_dssp SCCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETT------EEEECCCCSSCSSCCCCEEEEEEES---CTTCEEEEE
T ss_pred ccCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECC------EEEEeeeecCCCCCccccEEEEEec---CCCCEEEEE
Confidence 3344445566678999999999999999999999853 267999999999999999 766664 335789999
Q ss_pred EEeecCCCCCcceEEEEEechhhhhccCCCceEEeecccccCCCCCccccceEEEE
Q 010107 206 CFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVD 261 (518)
Q Consensus 206 V~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~~~~k~~~k~~~G~i~l~ 261 (518)
|||+|..+++++||++.+++.++.. +...+++|.+++.+. +. .|+|.|.
T Consensus 79 V~d~d~~~~~~~lG~~~i~l~~l~~--~~~~w~~L~~~~~~~----~~-~G~i~l~ 127 (133)
T 2ep6_A 79 VFDEDGDKPPDFLGKVAIPLLSIRD--GQPNCYVLKNKDLEQ----AF-KGVIYLE 127 (133)
T ss_dssp EEEEETTEEEEECCBCEEEGGGCCS--SCCEECCCBCSCTTS----CC-SSEEEEE
T ss_pred EEECCCCCCCCeeEEEEEEHHHccC--CCceEEEeecCCCCC----cc-ceEEEEE
Confidence 9999999899999999999999953 445677776644322 12 8999984
No 17
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=1.7e-16 Score=142.91 Aligned_cols=124 Identities=17% Similarity=0.314 Sum_probs=99.6
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
..+|+|.+++++. .+.+.+.+++|++|+.+|.++++||||++++.+ ++.....+||+++++++||.|+| |.|.+..
T Consensus 17 ~~~G~l~~~l~~~--~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 93 (149)
T 1a25_A 17 ERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIP-DPKSESKQKTKTIKCSLNPEWNETFRFQLKE 93 (149)
T ss_dssp CTTCEEEEEEEES--SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEES-CTTCSSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred CcceEEEEEEEec--CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEEC-CCCCcceEecceeCCCCCCcCCcEEEEEecc
Confidence 4579999999873 355666678999999999999999999999875 34445689999999999999999 6666542
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeeccc
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 244 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~ 244 (518)
.+....|.|+|||+|..+++++||++.+++.++... ....|++|.+.+
T Consensus 94 -~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~~ 141 (149)
T 1a25_A 94 -SDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQE 141 (149)
T ss_dssp -GGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCHH
T ss_pred -ccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCCC
Confidence 123468999999999999999999999999999753 233567776543
No 18
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.68 E-value=5.2e-17 Score=149.08 Aligned_cols=124 Identities=19% Similarity=0.250 Sum_probs=99.5
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
..+|+|.+++++....+.+.+.+++|++|+.+|.+|++||||++++.++ +.....+||+++++|+||+|++ |.|.+..
T Consensus 21 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 99 (166)
T 2cm5_A 21 EERGKILVSLMYSTQQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPD-MGKKAKHKTQIKKKTLNPEFNEEFFYDIKH 99 (166)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC----CCEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CccceEEEEEEEECCCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECC-CCccceEeCCcccCCCCCcccceEEEEcch
Confidence 4589999999999888888888999999999999999999999999753 3345689999999999999998 6555532
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeec
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 242 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n 242 (518)
-.-....|.|+|||++..+++++||++.+++.++.. +...+++|++
T Consensus 100 ~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~--~~~~W~~l~~ 145 (166)
T 2cm5_A 100 SDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKGE--RLKHWYECLK 145 (166)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCHH--HHHHHHHHHH
T ss_pred HhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCCc--hhHHHHHHHh
Confidence 110256899999999999999999999999998642 2234555554
No 19
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.68 E-value=2.6e-16 Score=145.32 Aligned_cols=122 Identities=16% Similarity=0.237 Sum_probs=97.7
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCC-CCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeee
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDL-FSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQ 193 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~-~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~ 193 (518)
...|+|.+++++ ..+.+.+.+++|++|+.+|. +|.+||||++++.+ ++.+...+||+++++|+||+||| |.|.+.
T Consensus 16 ~~~G~l~~~l~y--~~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~ 92 (171)
T 2q3x_A 16 PAMGDIQIGMED--KKGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLE-NGACIAKKKTRIARKTLDPLYQQSLVFDES 92 (171)
T ss_dssp -CCCEEEEEEEE--ETTEEEEEEEEEESCCCCC---CCCEEEEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEECSSC
T ss_pred CCccEEEEEEEE--CCCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEEC-CCccccceeCccCCCCCCCCCCcEEEEEec
Confidence 347999999998 45667777899999999995 79999999999976 45566799999999999999999 555542
Q ss_pred ccCCCCccEEEEEE-eecCCCCCcceEEEEEechhhhhccCCCceEEeecc
Q 010107 194 QVGSKDSPLIIECF-NFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLS 243 (518)
Q Consensus 194 ~l~~~~~~L~veV~-D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~ 243 (518)
.....|.|+|| |+|..+++++||++.++|.++........|++|...
T Consensus 93 ---~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 93 ---PQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp ---CTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred ---CCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 23688999999 999999999999999999999643333456666543
No 20
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.67 E-value=2.7e-16 Score=139.17 Aligned_cols=122 Identities=16% Similarity=0.245 Sum_probs=99.7
Q ss_pred cceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccC
Q 010107 118 CGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVG 196 (518)
Q Consensus 118 ~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~ 196 (518)
+|+|.+++.|....+.+.+.+++|++|+.+|.+|++|||+++++.++ +.....++|+++++++||.|+| |.+.+..-.
T Consensus 2 ~G~l~~sl~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~-~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~ 80 (138)
T 3n5a_A 2 RGELLLSLCYNPSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYK-DKRVEKKKTVTKKRNLNPIFNESFAFDIPTEK 80 (138)
T ss_dssp CCEEEEEEEEETTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEET-TEEEEEEECCCCSSCSSCEEEEEEEEECCGGG
T ss_pred CcEEEEEEEEcCCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeC-CCccceEeCccccCCCCCcCcceEEEECChhh
Confidence 69999999998888888888999999999999999999999999864 4456789999999999999998 555543211
Q ss_pred CCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeec
Q 010107 197 SKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 242 (518)
Q Consensus 197 ~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n 242 (518)
-....|.|+|||++..+++++||++.+++.++.. +...+++++.
T Consensus 81 l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~~~--~~~~W~~l~~ 124 (138)
T 3n5a_A 81 LRETTIIITVMDKDKLSRNDVIGKIYLSWKSGPG--EVKHWKDMIA 124 (138)
T ss_dssp GGGEEEEEEEEECCSSSCCEEEEEEEESSSSCHH--HHHHHHHHHH
T ss_pred cCceEEEEEEEECCCCCCCcEEEEEEEccccCCh--HHHHHHHHHh
Confidence 0136799999999999999999999999997643 3334555554
No 21
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.67 E-value=6.7e-17 Score=144.17 Aligned_cols=123 Identities=18% Similarity=0.275 Sum_probs=98.4
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCce--------eeEeeeccccCCCCCceee
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTH--------IPVCKTEVLKNETKPTWKS 187 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~--------~~~~kTevik~tlnP~W~e 187 (518)
..+|+|.+++.+. .+.+.+.+++|++|+.+|.+|++||||++++.++.+.. ...+||+++++|+||.||+
T Consensus 4 ~~~G~i~~~l~y~--~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne 81 (142)
T 1rh8_A 4 PITGEIQLQINYD--LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQ 81 (142)
T ss_dssp CCCCEEEEEEEEE--TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEE
T ss_pred CcceEEEEEEEEc--CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCC
Confidence 4589999999986 56778888999999999999999999999987543221 2468999999999999999
Q ss_pred -eEEe-ee--ccCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeec
Q 010107 188 -VFLN-IQ--QVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 242 (518)
Q Consensus 188 -f~~~-~~--~l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n 242 (518)
|.+. +. .+ ....|.|+|||+|..+++++||++.+++.++........+++|..
T Consensus 82 ~f~f~~v~~~~l--~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 82 TVIYKSISMEQL--MKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEECSCCHHHH--TTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred EEEECCcCHHHc--cCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCc
Confidence 5543 21 22 257899999999999999999999999999865444455666644
No 22
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.67 E-value=3.2e-16 Score=141.69 Aligned_cols=124 Identities=15% Similarity=0.208 Sum_probs=93.8
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
..+|+|.++++|.+..+.+.+.+++|++|+.+|.+|++||||++++.+ ++.....+||+++++|+||.||| |.|.+..
T Consensus 14 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 92 (153)
T 1w15_A 14 SGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYH-AKKRISKKKTHVKKCTPNAVFNELFVFDIPC 92 (153)
T ss_dssp --CCEEEEEEEEETTTTEEEEEEEEEESCC------CCCEEEEEEEEE-TTEEEEEEECCCCCSCSSEEEEEEEEEECCS
T ss_pred ccccEEEEEEEEcCCCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEe-CCeEeceEecCcccCCCCCeecceEEEECCH
Confidence 458999999999988888888899999999999999999999999975 45556789999999999999998 6555432
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeec
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 242 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n 242 (518)
-.-....|.|+|||+|..+++++||++.+++.+.. .+...++.|++
T Consensus 93 ~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~~~--~~~~~W~~l~~ 138 (153)
T 1w15_A 93 ESLEEISVEFLVLDSERGSRNEVIGRLVLGATAEG--SGGGHWKEICD 138 (153)
T ss_dssp SSSTTEEEEEEEEECCTTSCCEEEEEEEESTTCCS--HHHHHHHHHHH
T ss_pred HHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCc--hHHHHHHHHHh
Confidence 11124789999999999999999999999998832 22234455554
No 23
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.67 E-value=6e-16 Score=139.81 Aligned_cols=122 Identities=16% Similarity=0.324 Sum_probs=87.3
Q ss_pred ceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecC
Q 010107 133 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 211 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~ 211 (518)
.+.+.+++|++|+.+|.+|++||||++++.+....+...+||+++++++||.|+| |.+.+. .....|.|+|||++.
T Consensus 21 ~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~---~~~~~l~~~V~d~d~ 97 (153)
T 3b7y_A 21 IVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH---PQQHRLLFEVFDENR 97 (153)
T ss_dssp EEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEEC---TTTCEEEEEEEECCS
T ss_pred EEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEec---CCCCEEEEEEEECCC
Confidence 3455578999999999999999999999985444456789999999999999999 666554 235789999999999
Q ss_pred CCCCcceEEEEEechhhhhccCC------CceEEeecccccCCCCCccccceEEEEE
Q 010107 212 NGKHDLIGKVQKSLADLEKLHSS------GQGQNLFLSTAAGNNNHKILNSQLFVDK 262 (518)
Q Consensus 212 ~~~~d~IG~~~i~l~~L~~~~~~------~~~~~l~n~~~~~k~~~k~~~G~i~l~~ 262 (518)
.+++++||++.+++.++...... ..++.|..... +. +. .|+|.|.-
T Consensus 98 ~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~--~~--~~-~G~i~l~l 149 (153)
T 3b7y_A 98 LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSH--KS--RV-KGYLRLKM 149 (153)
T ss_dssp SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSST--TC--CC-CSEEEEEE
T ss_pred CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccC--CC--Cc-ceEEEEEE
Confidence 99999999999999999753322 24555533221 11 22 89999853
No 24
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.66 E-value=5.9e-16 Score=140.90 Aligned_cols=112 Identities=20% Similarity=0.320 Sum_probs=95.0
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
..+|+|.+++.|....+.+.+.+++|++|+.+|.+|.+||||++++.++ +.....+||+++++++||.|++ |.|.+..
T Consensus 9 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~-~~~~~~~kT~v~~~t~nP~wne~f~f~v~~ 87 (159)
T 1tjx_A 9 EKLGDICFSLRYVPTAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQN-GKRLKKKKTTIKKNTLNPYYNESFSFEVPF 87 (159)
T ss_dssp GCCCEEEEEEEEETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEET-TEEEEEEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CcCCeEEEEEEEcCCCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeC-CceeceeeCceecCCCCCcccceEEEEcCH
Confidence 5689999999999888888888999999999999999999999999753 5566789999999999999998 5555432
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhh
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADL 228 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L 228 (518)
-.-....|.|+|||+|..+++++||++.+++..+
T Consensus 88 ~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 88 EQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp GGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred HHhCCcEEEEEEEECCCCCCCceEEEEEECCCCC
Confidence 1101467999999999999999999999999853
No 25
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=3.4e-16 Score=140.56 Aligned_cols=125 Identities=17% Similarity=0.316 Sum_probs=97.7
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcC-CC------CCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCK-DL------FSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS- 187 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~-d~------~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e- 187 (518)
...|+|.+++.|.+..+.+.+.+++|++|+.+ |. ++.+||||++++.++.. ..+||+++++++||+|+|
T Consensus 10 ~~~G~l~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~---~~~kT~v~~~t~nP~wne~ 86 (147)
T 2enp_A 10 YQLGMLHFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQK---NSKQTGVKRKTQKPVFEER 86 (147)
T ss_dssp CCCCEEEEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCS---SCEECCCCCSCSSCCCCBC
T ss_pred CcceEEEEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCC---cceEeecccCCCCCeEeee
Confidence 56899999999998888888889999999984 43 46899999999975322 478999999999999998
Q ss_pred eEEeeeccCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeeccc
Q 010107 188 VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 244 (518)
Q Consensus 188 f~~~~~~l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~ 244 (518)
|.|.+..-.-....|.|+|||++..+++++||++.++|.++..... ..+|..+.++
T Consensus 87 f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~-~~~w~~L~~~ 142 (147)
T 2enp_A 87 YTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKG-GHWWKALIPS 142 (147)
T ss_dssp CEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTC-CCEEECCBCC
T ss_pred EEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCC-ccEEEEeecC
Confidence 6655432100135899999999999999999999999999964322 3355555543
No 26
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.65 E-value=7e-16 Score=136.56 Aligned_cols=116 Identities=12% Similarity=0.158 Sum_probs=88.5
Q ss_pred eceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEe-eeccCCCCcc
Q 010107 124 HAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLN-IQQVGSKDSP 201 (518)
Q Consensus 124 ~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~-~~~l~~~~~~ 201 (518)
.+.+....+.+.+.+++|++|+. +.+|.+||||++++.+ ++.....+||+++++|+||+||| |.+. +..-.-....
T Consensus 12 ~~~~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~-~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~ 89 (134)
T 2b3r_A 12 KLSVSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLP-DTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRE 89 (134)
T ss_dssp EEEEEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEES-CSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCE
T ss_pred EEEEeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEc-CCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCE
Confidence 33333345677788899999997 8889999999999974 34456789999999999999998 5555 3311002578
Q ss_pred EEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEee
Q 010107 202 LIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLF 241 (518)
Q Consensus 202 L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~ 241 (518)
|.|+|||+|..+++++||++.+++.++........+++|.
T Consensus 90 L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~ 129 (134)
T 2b3r_A 90 LQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLT 129 (134)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECB
T ss_pred EEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECC
Confidence 9999999999999999999999999996433333455554
No 27
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.64 E-value=2.1e-15 Score=139.74 Aligned_cols=123 Identities=15% Similarity=0.306 Sum_probs=86.9
Q ss_pred ceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecC
Q 010107 133 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 211 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~ 211 (518)
.+.+.+++|++|+.+|.+|++||||++++.+..+++..+++|+++++++||.|++ |.|.+. +....|.|+|||++.
T Consensus 9 ~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~---~~~~~L~~~V~d~d~ 85 (176)
T 3m7f_B 9 VVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL---PQRHRILFEVFDENR 85 (176)
T ss_dssp EEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEEC---TTTCEEEEEEEECC-
T ss_pred EEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEc---CCCCEEEEEEEECCC
Confidence 3555678999999999999999999999986555566789999999999999999 555543 235789999999999
Q ss_pred CCCCcceEEEEEechhhhhccCC-C-----ceEEeecccccCCCCCccccceEEEEEe
Q 010107 212 NGKHDLIGKVQKSLADLEKLHSS-G-----QGQNLFLSTAAGNNNHKILNSQLFVDKF 263 (518)
Q Consensus 212 ~~~~d~IG~~~i~l~~L~~~~~~-~-----~~~~l~n~~~~~k~~~k~~~G~i~l~~~ 263 (518)
.+++++||++.++|.++...... . .++.|.....++ + ..|+|.|.-.
T Consensus 86 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~----~-~~G~l~l~l~ 138 (176)
T 3m7f_B 86 LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS----R-VKGYLRLKMT 138 (176)
T ss_dssp ---CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC----C-CCSEEEEEEE
T ss_pred CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC----c-cCEEEEEEEE
Confidence 99999999999999999653221 0 345554322211 2 2899998543
No 28
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=2.3e-15 Score=133.84 Aligned_cols=117 Identities=19% Similarity=0.256 Sum_probs=89.1
Q ss_pred ceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeecc-CCCCccEEEEEEeec
Q 010107 133 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV-GSKDSPLIIECFNFN 210 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l-~~~~~~L~veV~D~d 210 (518)
.+.+.+++|++|+.+|. |++||||++++.+ ..+||+++++++||+|+| |.|.+... .+....|.|+|||+|
T Consensus 8 ~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~------~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d 80 (140)
T 2dmh_A 8 MLRVIVESASNIPKTKF-GKPDPIVSVIFKD------EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFE 80 (140)
T ss_dssp EEEEEEEEEESCCCCSS-SCCCEEEEEECSS------CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETT
T ss_pred EEEEEEEEeeCCCCCCC-CCCCeEEEEEECC------EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECC
Confidence 45556789999999999 9999999999863 269999999999999999 66665421 124688999999999
Q ss_pred CCCCCcceEEEEEechhhhhccCCCceEE---eecccccCCCCCccccceEEEEE
Q 010107 211 SNGKHDLIGKVQKSLADLEKLHSSGQGQN---LFLSTAAGNNNHKILNSQLFVDK 262 (518)
Q Consensus 211 ~~~~~d~IG~~~i~l~~L~~~~~~~~~~~---l~n~~~~~k~~~k~~~G~i~l~~ 262 (518)
..+++++||++.+++.++........++. +.++++ .+ ..|+|.|.-
T Consensus 81 ~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~-----~~-~~G~l~l~~ 129 (140)
T 2dmh_A 81 TIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKG-----QD-TGATIDLVI 129 (140)
T ss_dssp CSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTC-----CE-EEEEEEEEE
T ss_pred CCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCC-----CC-CCCEEEEEE
Confidence 99999999999999999965332234555 444321 11 279998843
No 29
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.62 E-value=4.9e-15 Score=130.47 Aligned_cols=118 Identities=21% Similarity=0.293 Sum_probs=88.3
Q ss_pred eEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecCC
Q 010107 134 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSN 212 (518)
Q Consensus 134 li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~~ 212 (518)
+.+.+++|++|+++|.+|++|||+++++.+. ...++|+++++|+||.|+| |.+.+.. ...|.|+|||+|..
T Consensus 7 L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~----~~~~kT~v~~~t~nP~wne~f~f~v~~----~~~l~~~v~d~d~~ 78 (132)
T 3pyc_A 7 IRLTVLCAKNLAKKDFFRLPDPFAKIVVDGS----GQCHSTDTVKNTLDPKWNQHYDLYVGK----TDSITISVWNHKKI 78 (132)
T ss_dssp EEEEEEEEESCCCCSTTCCCCEEEEEEETTT----CCEEECCCCSSCSSCEEEEEEEEEEET----TCCEEEEEEEGGGT
T ss_pred EEEEEEEeECCCCCCCCCCcCeEEEEEECCC----CceEECCccCCCCCCCccCEEEEEeCC----CCEEEEEEEECCCC
Confidence 4556789999999999999999999998532 2579999999999999999 6555542 24599999999988
Q ss_pred CC---CcceEEEEEechhhhhccC-CCceEEeecccccCCCCCccccceEEEEE
Q 010107 213 GK---HDLIGKVQKSLADLEKLHS-SGQGQNLFLSTAAGNNNHKILNSQLFVDK 262 (518)
Q Consensus 213 ~~---~d~IG~~~i~l~~L~~~~~-~~~~~~l~n~~~~~k~~~k~~~G~i~l~~ 262 (518)
++ +++||++.+++.++..... ...++.|..... .+..+. .|+|.+.-
T Consensus 79 ~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~--~~~~~~-~G~i~v~l 129 (132)
T 3pyc_A 79 HKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNP--SDTDAV-RGQIVVSL 129 (132)
T ss_dssp TSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSST--TCCCCC-CSEEEEEE
T ss_pred CCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCC--CCCCce-eEEEEEEE
Confidence 76 7999999999999844322 234566544221 111223 89999853
No 30
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.61 E-value=1.1e-14 Score=144.97 Aligned_cols=138 Identities=14% Similarity=0.273 Sum_probs=106.6
Q ss_pred ccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeecc
Q 010107 117 HCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQV 195 (518)
Q Consensus 117 ~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l 195 (518)
.+|+|.+++.|......+.+.+++|++|+.+|..|++||||++++.++.+ ..++|+++++++||.|+| |.+.+..-
T Consensus 4 ~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~---~~~~T~~~~~~~nP~wne~f~f~v~~~ 80 (284)
T 2r83_A 4 KLGKLQYSLDYDFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYS 80 (284)
T ss_dssp CCCEEEEEEEEETTTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTT---SCEECCCCCSCSSCEEEEEEEECCCGG
T ss_pred ceeEEEEEEEEECCCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCC---ceEeCCcccCCCCCeeCceEEEEechH
Confidence 47999999999888888888889999999999999999999999875322 368999999999999999 65554321
Q ss_pred CCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeecccccCCCCCccccceEEEE
Q 010107 196 GSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVD 261 (518)
Q Consensus 196 ~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~~~~k~~~k~~~G~i~l~ 261 (518)
.-....|.|+|||+|..+++++||++.+++.++........++.|....+.. . .. .|.|.+.
T Consensus 81 ~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~-~--~~-~G~i~l~ 142 (284)
T 2r83_A 81 ELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEE-Q--EK-LGDICFS 142 (284)
T ss_dssp GCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCC-C--CC-CCEEEEE
T ss_pred HhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeecccccc-c--cc-cccEEEE
Confidence 1125789999999999999999999999999996432223456665533211 1 12 7888874
No 31
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.61 E-value=4.5e-15 Score=133.25 Aligned_cols=114 Identities=12% Similarity=0.244 Sum_probs=88.6
Q ss_pred CceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEeec
Q 010107 132 KTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFN 210 (518)
Q Consensus 132 ~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d 210 (518)
+.+.+.+++|++|+.+|.+|++||||++++.. ..++|+++++|+||.|++ |.+.+.. ....|.|+|||+|
T Consensus 17 ~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~~---~~~~l~~~v~d~d 87 (148)
T 3kwu_A 17 AKISITVVCAQGLQAKDKTGSSDPYVTVQVGK------TKKRTKTIYGNLNPVWEENFHFECHN---SSDRIKVRVLDED 87 (148)
T ss_dssp EEEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCCSCSSCEEEEEEEEEECS---TTCEEEEEEEECC
T ss_pred cEEEEEEEeeeCCCCCCCCCCcCeEEEEEECC------EEEECCccCCCCCCCcccEEEEEecC---CCCEEEEEEEECC
Confidence 44566678999999999999999999999832 478999999999999998 5555532 3578999999999
Q ss_pred CC-----------CCCcceEEEEEechhhhhccCCCceEEeecccccCCCCCccccceEEEE
Q 010107 211 SN-----------GKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVD 261 (518)
Q Consensus 211 ~~-----------~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~~~~k~~~k~~~G~i~l~ 261 (518)
.. +++++||++.+++.++. .+...++.|.....+. +. .|+|.|.
T Consensus 88 ~~~~~~~~~~~~~~~~~~lG~~~i~l~~l~--~~~~~w~~L~~~~~~~----~~-~G~i~l~ 142 (148)
T 3kwu_A 88 DDIKSRVKQRFKRESDDFLGQTIIEVRTLS--GEMDVWYNLDKRTDKS----AV-SGAIRLH 142 (148)
T ss_dssp CSHHHHHHTTTSSCSSEEEEEEEEEGGGCC--SEEEEEEECBCSSTTC----CC-CCEEEEE
T ss_pred CCccccccccccCCCCccEEEEEEEHHHCc--CCCCEEEEcccCCCCC----CC-ceEEEEE
Confidence 85 78999999999999993 2334566665332211 12 8999885
No 32
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.61 E-value=1.2e-14 Score=145.81 Aligned_cols=160 Identities=19% Similarity=0.268 Sum_probs=114.2
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
+.+|+|+++++|....+.+.+.+++|++|+.+|.+|++||||++++.++ + ...+||+++++|+||.|++ |.+.+..
T Consensus 4 ~~~G~l~~~l~y~~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~-~--~~~~kT~v~~~t~nP~wne~f~f~v~~ 80 (296)
T 1dqv_A 4 APCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPD-R--KKKFQTKVHRKTLNPIFNETFQFSVPL 80 (296)
T ss_dssp CSSCEEEEEEECCSSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTS-T--TSCEECCCCCSCSSCEEEEEEEEECCG
T ss_pred CeeeEEEEEEEEeCCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcC-C--CeeEeCCccCCCCCCcEeeEEEEEecH
Confidence 4589999999998888888888999999999999999999999998632 3 2478999999999999999 5555432
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEe-chhhhhccC-CCceEEeecccccCCCCCccccceEEEEEeeehhhhhhh
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKS-LADLEKLHS-SGQGQNLFLSTAAGNNNHKILNSQLFVDKFSESVQYTFL 272 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~-l~~L~~~~~-~~~~~~l~n~~~~~k~~~k~~~G~i~l~~~~~~~~~sFl 272 (518)
-.-..+.|.|+|||+|..+++++||++.++ +.++..... ...++.|...... ... .|.|.+..... ++
T Consensus 81 ~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~----~~~-~G~i~vsl~y~---~~-- 150 (296)
T 1dqv_A 81 AELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSE----KAD-LGELNFSLCYL---PT-- 150 (296)
T ss_dssp GGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSC----CSC-CCEEEEEEEEE---TT--
T ss_pred HHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeecccccccc----ccc-cceEEEEEEec---cc--
Confidence 110246899999999999999999999995 555543222 2335555443211 122 79998854321 11
Q ss_pred hhcccCceeeEEEEecccc
Q 010107 273 DYLAGGFELNFMVAVDFTA 291 (518)
Q Consensus 273 dyi~~g~~~~~~~~iDft~ 291 (518)
.+.+.+.++=|-|+-.
T Consensus 151 ---~~~l~v~v~~a~~L~~ 166 (296)
T 1dqv_A 151 ---AGLLTVTIIKASNLKA 166 (296)
T ss_dssp ---TTEEEEEEEEEESCCC
T ss_pred ---cceeEEEEEEeecCCc
Confidence 2335566665655543
No 33
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.57 E-value=1.1e-14 Score=128.66 Aligned_cols=112 Identities=14% Similarity=0.288 Sum_probs=88.1
Q ss_pred eEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeecccc-CCCCCceee-eEEeeeccCCCCccEEEEEEeecC
Q 010107 134 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 211 (518)
Q Consensus 134 li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik-~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~ 211 (518)
+.+.+++|++|+.+|.+|++||||++++.+. .+||++++ +++||.|+| |.+.+.. ....|.|+|||++.
T Consensus 12 L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~------~~kT~~~~~~~~nP~Wne~f~f~v~~---~~~~l~~~V~d~~~ 82 (136)
T 1wfj_A 12 LEVVLVSAKGLEDADFLNNMDPYVQLTCRTQ------DQKSNVAEGMGTTPEWNETFIFTVSE---GTTELKAKIFDKDV 82 (136)
T ss_dssp EEEEEEEEEECSSCCSSCSSCCCEEEESSSC------EEECCCCTTCCSSCEEEEEEEEEEES---SCCEEEEEECCSSS
T ss_pred EEEEEEeccCCCCcccCCCcCceEEEEECCc------cceeEeccCCCCCCccCcEEEEEECC---CCCEEEEEEEECCC
Confidence 4455689999999999999999999998532 57999998 899999998 6666653 46789999999999
Q ss_pred CCCCcceEEEEEechhhhhcc-CCCceEEeecccccCCCCCccccceEEEEE
Q 010107 212 NGKHDLIGKVQKSLADLEKLH-SSGQGQNLFLSTAAGNNNHKILNSQLFVDK 262 (518)
Q Consensus 212 ~~~~d~IG~~~i~l~~L~~~~-~~~~~~~l~n~~~~~k~~~k~~~G~i~l~~ 262 (518)
.+++++||++.+++.++.... ....+++|. +. + +. .|+|.|.-
T Consensus 83 ~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~--~----~~-~G~i~l~l 126 (136)
T 1wfj_A 83 GTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KD--E----EY-KGEIWVAL 126 (136)
T ss_dssp CTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ET--T----EE-EEEEEEEE
T ss_pred CCCCceEEEEEEEHHHhccCCCCCcEEEEee-cC--C----cc-CEEEEEEE
Confidence 999999999999999995321 123456665 11 1 12 89999854
No 34
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.54 E-value=9.1e-15 Score=127.39 Aligned_cols=92 Identities=15% Similarity=0.301 Sum_probs=75.5
Q ss_pred ceEEEEEeecCCCcC---CCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEe
Q 010107 133 TTTELILRCSDLDCK---DLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFN 208 (518)
Q Consensus 133 ~li~~~i~a~~L~~~---d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D 208 (518)
.+.+.+++|++|+.+ |.+|++||||++++.+.. ...+||+++++++||.|+| |.+.+.. .....|.|+|||
T Consensus 4 ~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~---~~~~kT~v~~~t~nP~wne~f~f~v~~--~~~~~l~i~V~d 78 (126)
T 1rlw_A 4 KFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTP---DSRKRTRHFNNDINPVWNETFEFILDP--NQENVLEITLMD 78 (126)
T ss_dssp EEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTST---TCCEECCCCTTCSSCEEEEEEEEEECT--TSCCEEEEEEEE
T ss_pred EEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCC---CceEEccccCCCCCCcccceEEEEecC--CCCCEEEEEEEE
Confidence 355667899999984 778999999999986421 3579999999999999998 6666532 236789999999
Q ss_pred ecCCCCCcceEEEEEechhhhh
Q 010107 209 FNSNGKHDLIGKVQKSLADLEK 230 (518)
Q Consensus 209 ~d~~~~~d~IG~~~i~l~~L~~ 230 (518)
++..+ +++||++.+++.++..
T Consensus 79 ~d~~~-~~~iG~~~i~l~~l~~ 99 (126)
T 1rlw_A 79 ANYVM-DETLGTATFTVSSMKV 99 (126)
T ss_dssp CCSSC-CEEEEEEEEEGGGSCT
T ss_pred CCCCC-CceeEEEEEEHHHccC
Confidence 99874 8999999999999964
No 35
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.54 E-value=2e-14 Score=130.62 Aligned_cols=89 Identities=18% Similarity=0.232 Sum_probs=74.4
Q ss_pred ceEEEEEeecCCCcCCCC----------CCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCcc
Q 010107 133 TTTELILRCSDLDCKDLF----------SRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSP 201 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~----------g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~ 201 (518)
.+.+.+++|++|+++|.+ |.+||||++.+.+ ..+.||+++++|+||.||| |.+.+.. ...
T Consensus 30 ~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~-----~~~~kT~v~~ktlnP~WNE~F~f~v~~----~~~ 100 (157)
T 2fk9_A 30 YLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQ-----VRVGQTSTKQKTNKPTYNEEFCANVTD----GGH 100 (157)
T ss_dssp EEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETT-----EEEEECCCCSSCSSCEEEEEEEEEEEE----ECE
T ss_pred EEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECC-----EeeEEeeecCCCCCCccCcEEEEEcCC----CCE
Confidence 455567899999998832 6799999998742 3468999999999999999 6666543 368
Q ss_pred EEEEEEeecCCCCCcceEEEEEechhhhh
Q 010107 202 LIIECFNFNSNGKHDLIGKVQKSLADLEK 230 (518)
Q Consensus 202 L~veV~D~d~~~~~d~IG~~~i~l~~L~~ 230 (518)
|.|+|||+|..+++++||.+.+++.++..
T Consensus 101 L~~~V~D~d~~~~dd~iG~~~i~l~~l~~ 129 (157)
T 2fk9_A 101 LELAVFHETPLGYDHFVANCTLQFQELLR 129 (157)
T ss_dssp EEEEEEECCSSSSCEEEEEEEEEHHHHHH
T ss_pred EEEEEEECCCCCCCCEEEEEEEEHHHhhc
Confidence 99999999999999999999999999975
No 36
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.53 E-value=5.5e-14 Score=129.98 Aligned_cols=115 Identities=15% Similarity=0.143 Sum_probs=85.3
Q ss_pred ceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecC
Q 010107 133 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 211 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~ 211 (518)
.+.+.+++|++|+..+.++++||||++++. + .++||+++++|+||+|+| |.|.+. ....|.|+|||+|.
T Consensus 37 ~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~---~---~~~kT~v~~~tlnP~Wne~f~f~v~----~~~~L~~~V~D~d~ 106 (173)
T 2nq3_A 37 QLQITVISAKLKENKKNWFGPSPYVEVTVD---G---QSKKTEKCNNTNSPKWKQPLTVIVT----PVSKLHFRVWSHQT 106 (173)
T ss_dssp EEEEEEEEEEECCCC--CCCCCEEEEEEET---T---EEEECCCCSSCSSCEEEEEEEEEEC----TTCEEEEEEEECCS
T ss_pred EEEEEEEEeECCCCcccCCCCCeEEEEEEC---C---EEeEccccCCCCCCeECCEEEEEeC----CCCEEEEEEEECCC
Confidence 455667899999954444559999999984 2 589999999999999999 666552 37889999999999
Q ss_pred CCCCcceEEEEEechhhhhccCC-----CceEEeecccccCCCCCccccceEEEEE
Q 010107 212 NGKHDLIGKVQKSLADLEKLHSS-----GQGQNLFLSTAAGNNNHKILNSQLFVDK 262 (518)
Q Consensus 212 ~~~~d~IG~~~i~l~~L~~~~~~-----~~~~~l~n~~~~~k~~~k~~~G~i~l~~ 262 (518)
.+++++||++.+++.++...... ..++.|...+ ...+. .|+|.+.-
T Consensus 107 ~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~----~~~~~-~G~L~v~l 157 (173)
T 2nq3_A 107 LKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDK----EPTET-IGDLSICL 157 (173)
T ss_dssp SSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESS----CTTSE-EEEEEEEE
T ss_pred CCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCC----CCCcc-cEEEEEEE
Confidence 99999999999999999753221 1244444331 12223 89988754
No 37
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.52 E-value=5.8e-14 Score=124.33 Aligned_cols=89 Identities=13% Similarity=0.246 Sum_probs=74.6
Q ss_pred ceEEEEEeecCCCcCCCCCC-----------CCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCc
Q 010107 133 TTTELILRCSDLDCKDLFSR-----------NDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDS 200 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~g~-----------sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~ 200 (518)
.+.+.+++|++|+++|.+++ +||||++++. + ..+.+|+++++|+||.||| |.+.+.. .+
T Consensus 7 ~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~---~--~~~~~T~~~~~t~nP~WnE~f~f~v~~----~~ 77 (136)
T 1gmi_A 7 LLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVD---D--SRIGQTATKQKTNSPAWHDEFVTDVCN----GR 77 (136)
T ss_dssp EEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEET---T--EEEEECCCCSSCSSCEEEEEEEEEEEE----EC
T ss_pred EEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEEC---C--eEeeeeeEECCCcCCccCCEEEEEecC----CC
Confidence 34555789999999986655 9999999873 2 3568999999999999999 6666542 27
Q ss_pred cEEEEEEeecCCCCCcceEEEEEechhhhh
Q 010107 201 PLIIECFNFNSNGKHDLIGKVQKSLADLEK 230 (518)
Q Consensus 201 ~L~veV~D~d~~~~~d~IG~~~i~l~~L~~ 230 (518)
.|.|+|||+|..+++++||++.+++.++..
T Consensus 78 ~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~ 107 (136)
T 1gmi_A 78 KIELAVFHDAPIGYDDFVANCTIQFEELLQ 107 (136)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEEHHHHTS
T ss_pred EEEEEEEeCCCCCCCCEEEEEEEEHHHhcc
Confidence 899999999999999999999999999975
No 38
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.46 E-value=3.6e-13 Score=121.46 Aligned_cols=103 Identities=20% Similarity=0.323 Sum_probs=83.3
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++....++|.+..||+++++|+||+|+++|.|.+.. ..+.|+|+|||.|. ++++++||++.++|
T Consensus 44 yv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~-~~~~l~~~V~d~d~-----------~~~d~~iG~~~i~l 111 (153)
T 3b7y_A 44 YVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHP-QQHRLLFEVFDENR-----------LTRDDFLGQVDVPL 111 (153)
T ss_dssp EEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECT-TTCEEEEEEEECCS-----------SSCCEEEEEEEEEC
T ss_pred EEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecC-CCCEEEEEEEECCC-----------CcCCCeeEEEEEEH
Confidence 5788887656678899999999999999999999998874 35789999999994 46899999999999
Q ss_pred cccccccce------eEEEeccCCcccccccccCCCCCCCCcccceeeeeceee
Q 010107 81 SQIVTRKNR------SLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 128 (518)
Q Consensus 81 ~~l~~~~~~------~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~ 128 (518)
.++...... ..|++|..+ .+ ..+..|+|++++.++
T Consensus 112 ~~l~~~~~~~~~~~~~~w~~L~~~-----------~~--~~~~~G~i~l~l~~~ 152 (153)
T 3b7y_A 112 YPLPTENPRLERPYTFKDFVLHPR-----------SH--KSRVKGYLRLKMTYL 152 (153)
T ss_dssp CSCCBCCTTSCCCCCCEEEECBCS-----------ST--TCCCCSEEEEEEEEC
T ss_pred HHcccCCCcccccccccccccccc-----------cC--CCCcceEEEEEEEEe
Confidence 999876543 479998652 11 124579999988764
No 39
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.39 E-value=8.8e-13 Score=114.71 Aligned_cols=95 Identities=17% Similarity=0.233 Sum_probs=77.8
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++..... +..||+++++++||+|+++|.|.+.....+.|+|+|||.|. + ++++||++.++|
T Consensus 30 yv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~-----------~-~~~~iG~~~i~l 94 (126)
T 1rlw_A 30 YVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY-----------V-MDETLGTATFTV 94 (126)
T ss_dssp EEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS-----------S-CCEEEEEEEEEG
T ss_pred EEEEEEccCCC---ceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC-----------C-CCceeEEEEEEH
Confidence 46666654222 57899999999999999999999876777899999999994 2 489999999999
Q ss_pred cccccccceeEEEeccCCcccccccccCCCCCCCCcccceeeeeceee
Q 010107 81 SQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 128 (518)
Q Consensus 81 ~~l~~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~ 128 (518)
+++........|++|.+ ...|.|+++++..
T Consensus 95 ~~l~~~~~~~~~~~L~~------------------~~~g~i~~~le~~ 124 (126)
T 1rlw_A 95 SSMKVGEKKEVPFIFNQ------------------VTEMVLEMSLEVA 124 (126)
T ss_dssp GGSCTTCEEEEEEEETT------------------TEEEEEEEEEECC
T ss_pred HHccCCCcEEEEEEcCC------------------CceEEEEEEEEeC
Confidence 99987777788999955 3468888887754
No 40
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.39 E-value=2e-12 Score=119.54 Aligned_cols=105 Identities=19% Similarity=0.310 Sum_probs=80.6
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++....++|....||+++++++||+|++.|.|.+.. ..+.|+|+|||.|. +++++|||++.++|
T Consensus 32 yv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~-~~~~L~~~V~d~d~-----------~~~d~~lG~~~i~l 99 (176)
T 3m7f_B 32 YVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLP-QRHRILFEVFDENR-----------LTRDDFLGQVDVPL 99 (176)
T ss_dssp EEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECT-TTCEEEEEEEECC---------------CEEEEEEEEES
T ss_pred EEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcC-CCCEEEEEEEECCC-----------CCCCcEEEEEEEEH
Confidence 6888888767778899999999999999999999988874 44789999999994 46899999999999
Q ss_pred cccccccce-e-----EEEeccCCcccccccccCCCCCCCCcccceeeeeceeeec
Q 010107 81 SQIVTRKNR-S-----LTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECIN 130 (518)
Q Consensus 81 ~~l~~~~~~-~-----~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~~~ 130 (518)
.++...... . .|++|..+ .+ ..+.+|+|++++.+.+.
T Consensus 100 ~~l~~~~~~~~~~~~~~w~~L~~~-----------~~--~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 100 YPLPTENPRMERPYTFKDFVLHPR-----------SH--KSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp CSCCBC------CCCCEEEECBCS-----------ST--TCCCCSEEEEEEEECC-
T ss_pred HHccccCCcccccccccEEEcccc-----------CC--CCccCEEEEEEEEEEeC
Confidence 999866433 1 68898652 11 12457999999988764
No 41
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.37 E-value=1.5e-12 Score=118.21 Aligned_cols=89 Identities=19% Similarity=0.213 Sum_probs=72.8
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++.. .+++||+++++|+||+|||.|.+.+. ..+.|.|+|||.|. ++++|+||++.++|
T Consensus 63 Yv~v~l~~-----~~~~kT~v~~ktlnP~WNE~F~f~v~--~~~~L~~~V~D~d~-----------~~~dd~iG~~~i~l 124 (157)
T 2fk9_A 63 YLTVSVDQ-----VRVGQTSTKQKTNKPTYNEEFCANVT--DGGHLELAVFHETP-----------LGYDHFVANCTLQF 124 (157)
T ss_dssp EEEEEETT-----EEEEECCCCSSCSSCEEEEEEEEEEE--EECEEEEEEEECCS-----------SSSCEEEEEEEEEH
T ss_pred EEEEEECC-----EeeEEeeecCCCCCCccCcEEEEEcC--CCCEEEEEEEECCC-----------CCCCCEEEEEEEEH
Confidence 56777632 35799999999999999999999875 35799999999984 56899999999999
Q ss_pred cccccc----cceeEEEeccCCcccccccccCCCCCCCCcccceeeeecee
Q 010107 81 SQIVTR----KNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEE 127 (518)
Q Consensus 81 ~~l~~~----~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~ 127 (518)
.+|... .....|++|.. .|+|++.++.
T Consensus 125 ~~l~~~~~~~~~~~~W~~L~~--------------------~G~i~l~l~~ 155 (157)
T 2fk9_A 125 QELLRTTGASDTFEGWVDLEP--------------------EGKVFVVITL 155 (157)
T ss_dssp HHHHHHHTTCSEEEEEEECBS--------------------SCEEEEEEEE
T ss_pred HHhhcccCCCCcccEEEECCC--------------------CcEEEEEEEE
Confidence 999855 45688999954 5888887654
No 42
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.37 E-value=2.1e-12 Score=114.22 Aligned_cols=91 Identities=12% Similarity=0.226 Sum_probs=73.3
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++. + .+++||+++++|+||+|+|.|.+.+... +.|+|+|||.|. ++++|+||++.++|
T Consensus 41 yv~v~l~---~--~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~~V~d~d~-----------~~~dd~iG~~~i~l 102 (136)
T 1gmi_A 41 YIALNVD---D--SRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIELAVFHDAP-----------IGYDDFVANCTIQF 102 (136)
T ss_dssp EEEEEET---T--EEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEEEEEECCS-----------SSSCEEEEEEEEEH
T ss_pred EEEEEEC---C--eEeeeeeEECCCcCCccCCEEEEEecCC--CEEEEEEEeCCC-----------CCCCCEEEEEEEEH
Confidence 4666662 2 3679999999999999999999987643 899999999994 46899999999999
Q ss_pred cccccccc--eeEEEeccCCcccccccccCCCCCCCCcccceeeeeceeee
Q 010107 81 SQIVTRKN--RSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECI 129 (518)
Q Consensus 81 ~~l~~~~~--~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~~ 129 (518)
.++..... ...|++|.. .|+|++++++..
T Consensus 103 ~~l~~~~~~~~~~w~~L~~--------------------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 103 EELLQNGSRHFEDWIDLEP--------------------EGKVYVIIDLSG 133 (136)
T ss_dssp HHHTSTTCSEEEEEEECBS--------------------SCEEEEEEEEEE
T ss_pred HHhcccCCCCccEEEEcCC--------------------CeEEEEEEEEEe
Confidence 99986542 377888844 588988887643
No 43
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.37 E-value=2e-12 Score=139.05 Aligned_cols=90 Identities=14% Similarity=0.308 Sum_probs=77.6
Q ss_pred ceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecC
Q 010107 133 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 211 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~ 211 (518)
.+.+.+++|++|+++|.+|++||||++++.+ ..++|+++++|+||.|++ |.+.+... ....|.|+|||+|.
T Consensus 388 ~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~------~~~~T~~~~~t~nP~w~e~f~f~~~~~--~~~~l~~~v~d~d~ 459 (510)
T 3jzy_A 388 RLMVHVIEATELKACKPNGKSNPYCEISMGS------QSYTTRTIQDTLNPKWNFNCQFFIKDL--YQDVLCLTLFDRDQ 459 (510)
T ss_dssp EEEEEEEEEESCCCCSTTSCCCEEEEEEETT------EEEECCCCSSCSSCEEEEEEEEEESCT--TTCEEEEEEEECCS
T ss_pred eEEEEeceeecCCCCCCCCCCCeEEEEEECC------eeccCCccCCCCCCccCceEEEEecCC--CCCEEEEEEEeCCC
Confidence 4556679999999999999999999999842 478999999999999999 66655432 35789999999999
Q ss_pred CCCCcceEEEEEechhhhh
Q 010107 212 NGKHDLIGKVQKSLADLEK 230 (518)
Q Consensus 212 ~~~~d~IG~~~i~l~~L~~ 230 (518)
.+++++||++.+++.++..
T Consensus 460 ~~~~d~lG~~~~~l~~l~~ 478 (510)
T 3jzy_A 460 FSPDDFLGRTEIPVAKIRT 478 (510)
T ss_dssp SSSCCEEEEEEEEHHHHHH
T ss_pred CCCCCceEEEEEEHHHhcc
Confidence 9999999999999999975
No 44
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.35 E-value=2.5e-12 Score=138.53 Aligned_cols=86 Identities=21% Similarity=0.303 Sum_probs=73.5
Q ss_pred ceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecC
Q 010107 133 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 211 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~ 211 (518)
.+.+.+++|++|+. |.+|++||||++++. + ..+||+++++|+||+||+ |.+....+ ...+.|+|+|||+|.
T Consensus 395 ~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~---~---~~~kTkvik~tlNP~Wne~f~f~~~~~-~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 395 HLVVSNFRAEHLWG-DYTTATDAYLKVFFG---G---QEFRTGVVWNNNNPRWTDKMDFENVLL-STGGPLRVQVWDADY 466 (540)
T ss_dssp EEEEEEEEEESCCC-SSCSCCCEEEEEEET---T---EEEECCCBCSCSSCBCCCCEEEEEEET-TTCCCEEEEEEECCS
T ss_pred EEEEEEEEccCCCc-ccCCCcCeEEEEEEC---C---EeeeeeeecCCCCCCCCeEEEEEEecC-CCCCEEEEEEEECCC
Confidence 35666799999999 999999999999985 2 249999999999999999 66664433 246889999999999
Q ss_pred CCCCcceEEEEEech
Q 010107 212 NGKHDLIGKVQKSLA 226 (518)
Q Consensus 212 ~~~~d~IG~~~i~l~ 226 (518)
.+++|+||++.++|.
T Consensus 467 ~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 467 GWDDDLLGSCDRSPH 481 (540)
T ss_dssp SSCCEEEEEEEECCC
T ss_pred CCCCCEEEEEEEEee
Confidence 999999999999987
No 45
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.30 E-value=1.2e-11 Score=110.66 Aligned_cols=105 Identities=17% Similarity=0.329 Sum_probs=74.4
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++.. +..||+++++|+||+|++.|.+.+... .+.|+|+|||.|....+.-.+....+++++||++.++|
T Consensus 41 yv~v~~~~------~~~kT~~~~~t~nP~Wne~f~f~v~~~-~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l 113 (148)
T 3kwu_A 41 YVTVQVGK------TKKRTKTIYGNLNPVWEENFHFECHNS-SDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEV 113 (148)
T ss_dssp EEEEEETT------EEEECCCCCSCSSCEEEEEEEEEECST-TCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEG
T ss_pred EEEEEECC------EEEECCccCCCCCCCcccEEEEEecCC-CCEEEEEEEECCCCccccccccccCCCCccEEEEEEEH
Confidence 56777722 578999999999999999999988654 47899999999952000000000126899999999999
Q ss_pred cccccccceeEEEeccCCcccccccccCCCCCCCCcccceeeeecee
Q 010107 81 SQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEE 127 (518)
Q Consensus 81 ~~l~~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~ 127 (518)
.++ ..+...|++|..+ .. ....+|+|++++.+
T Consensus 114 ~~l--~~~~~~w~~L~~~----------~~---~~~~~G~i~l~l~~ 145 (148)
T 3kwu_A 114 RTL--SGEMDVWYNLDKR----------TD---KSAVSGAIRLHISV 145 (148)
T ss_dssp GGC--CSEEEEEEECBCS----------ST---TCCCCCEEEEEEEE
T ss_pred HHC--cCCCCEEEEcccC----------CC---CCCCceEEEEEEEE
Confidence 999 3456789999652 11 12457999888764
No 46
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=4.7e-12 Score=112.23 Aligned_cols=98 Identities=21% Similarity=0.282 Sum_probs=76.8
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeC---ceeEEEEEEEEecCCcccccccccCccCcceeEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE---VVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEAT 77 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe---~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~ 77 (518)
||+|++.. +..||+++++++||+|+|.|.|.+..+ ..+.|+|+|||.|. ++++++||++.
T Consensus 30 yv~v~~~~------~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~-----------~~~~~~lG~~~ 92 (140)
T 2dmh_A 30 IVSVIFKD------EKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET-----------IGQNKLIGTAT 92 (140)
T ss_dssp EEEEECSS------CEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC-----------SSSCCCCEEEE
T ss_pred EEEEEECC------EeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC-----------CCCCceEEEEE
Confidence 46666642 368999999999999999999987532 45799999999994 46899999999
Q ss_pred EeccccccccceeEEEe---ccCCcccccccccCCCCCCCCcccceeeeeceeee
Q 010107 78 CTLSQIVTRKNRSLTLD---LVRREETITPITEESNPSNRPKHCGKLTVHAEECI 129 (518)
Q Consensus 78 ~~L~~l~~~~~~~~~~~---L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~~ 129 (518)
++|.+|........|++ |.+. .+ ....|+|++++.+.+
T Consensus 93 i~l~~l~~~~~~~~w~~l~~l~~~-----------~~---~~~~G~l~l~~~~~p 133 (140)
T 2dmh_A 93 VALKDLTGDQSRSLPYKLISLLNE-----------KG---QDTGATIDLVIGYDP 133 (140)
T ss_dssp EEGGGTCSSSCEEEEEEEEEEECT-----------TC---CEEEEEEEEEEEECC
T ss_pred EEHHHhccCCCceeEEeeeeccCC-----------CC---CCCCCEEEEEEEEEC
Confidence 99999987777788877 5441 11 144699999888765
No 47
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.30 E-value=5.5e-12 Score=116.51 Aligned_cols=97 Identities=22% Similarity=0.325 Sum_probs=75.7
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++.. +..||+|+++|+||+|+|+|.|.+ ...+.|+|+|||.|. +++++|||++.++|
T Consensus 60 Yv~v~~~~------~~~kT~v~~~tlnP~Wne~f~f~v--~~~~~L~~~V~D~d~-----------~~~dd~lG~~~i~l 120 (173)
T 2nq3_A 60 YVEVTVDG------QSKKTEKCNNTNSPKWKQPLTVIV--TPVSKLHFRVWSHQT-----------LKSDVLLGTAALDI 120 (173)
T ss_dssp EEEEEETT------EEEECCCCSSCSSCEEEEEEEEEE--CTTCEEEEEEEECCS-----------SSCCEEEEEEEEEH
T ss_pred EEEEEECC------EEeEccccCCCCCCeECCEEEEEe--CCCCEEEEEEEECCC-----------CCCCceEEEEEEEH
Confidence 56777732 789999999999999999999976 457899999999994 46899999999999
Q ss_pred cccccccc-----eeEEEeccCCcccccccccCCCCCCCCcccceeeeeceeee
Q 010107 81 SQIVTRKN-----RSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECI 129 (518)
Q Consensus 81 ~~l~~~~~-----~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~~ 129 (518)
.++..... ...|++|..+ .+ .....|+|.+.++++.
T Consensus 121 ~~l~~~~~~~~~~~~~~~~L~~~-----------~~--~~~~~G~L~v~l~~l~ 161 (173)
T 2nq3_A 121 YETLKSNNMKLEEVVVTLQLGGD-----------KE--PTETIGDLSICLDGLQ 161 (173)
T ss_dssp HHHHHHTTTEESSEEEEEEEEES-----------SC--TTSEEEEEEEEEESEE
T ss_pred HHhcccCCCCcceeEEEEECccC-----------CC--CCcccEEEEEEEeeee
Confidence 99975322 2568888651 11 1255799999887764
No 48
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.28 E-value=5.8e-12 Score=110.75 Aligned_cols=95 Identities=17% Similarity=0.272 Sum_probs=74.4
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++.. +..||+++++++||+|+++|.|.+. +..+.|+|+|||.|. ++++++||++.++|
T Consensus 37 yv~v~~~~------~~~kT~~~~~t~nP~wne~f~f~~~-~~~~~l~i~V~d~d~-----------~~~~~~lG~~~i~l 98 (133)
T 2ep6_A 37 FCLLELGN------DRLQTHTVYKNLNPEWNKVFTFPIK-DIHDVLEVTVFDEDG-----------DKPPDFLGKVAIPL 98 (133)
T ss_dssp EEEEEETT------EEEECCCCSSCSSCCCCEEEEEEES-CTTCEEEEEEEEEET-----------TEEEEECCBCEEEG
T ss_pred EEEEEECC------EEEEeeeecCCCCCccccEEEEEec-CCCCEEEEEEEECCC-----------CCCCCeeEEEEEEH
Confidence 46666633 3569999999999999999999886 345789999999995 46799999999999
Q ss_pred cccccccceeEEEeccCCcccccccccCCCCCCCCcccceeeeeceee
Q 010107 81 SQIVTRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 128 (518)
Q Consensus 81 ~~l~~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~ 128 (518)
.++.. +...|++|.++ .+ .....|+|+++++++
T Consensus 99 ~~l~~--~~~~w~~L~~~-----------~~--~~~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 99 LSIRD--GQPNCYVLKNK-----------DL--EQAFKGVIYLEMDLI 131 (133)
T ss_dssp GGCCS--SCCEECCCBCS-----------CT--TSCCSSEEEEEEEEE
T ss_pred HHccC--CCceEEEeecC-----------CC--CCccceEEEEEEEEE
Confidence 99964 45679898652 11 124579999988764
No 49
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.27 E-value=5.3e-12 Score=111.96 Aligned_cols=84 Identities=17% Similarity=0.175 Sum_probs=69.6
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++...++ ....||+|+++|+||+|+|+|.|.+..+.. ..|+|+|||.|. ++++++||++.+
T Consensus 47 yv~v~l~~~~~--~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d~-----------~~~dd~lG~~~i 113 (138)
T 1wfm_A 47 YVQGSVANRTG--SVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDR-----------FSRHSVAGELRL 113 (138)
T ss_dssp EEEEEEEETTE--EEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECCS-----------SCTTSCSEEEEE
T ss_pred EEEEEEEcCCC--cccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECCC-----------CCCCcEEEEEEE
Confidence 57777754222 357899999999999999999999776643 489999999994 568999999999
Q ss_pred eccccccccceeEEEeccC
Q 010107 79 TLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 79 ~L~~l~~~~~~~~~~~L~~ 97 (518)
+|.++........|++|..
T Consensus 114 ~l~~l~~~~~~~~W~~L~~ 132 (138)
T 1wfm_A 114 GLDGTSVPLGAAQWGELKT 132 (138)
T ss_dssp ESSSSSSCTTCCEEEECCC
T ss_pred EcccccCcccccceeeCcC
Confidence 9999976667889999966
No 50
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.26 E-value=6.7e-12 Score=110.80 Aligned_cols=85 Identities=21% Similarity=0.282 Sum_probs=70.9
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEE-EEeC--ceeEEEEEEEEecCCcccccccccCccCcceeEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFE--VVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEAT 77 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~-~~fe--~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~ 77 (518)
||+|++.. ++.+....||+++++|+||+|+|+|.|. +..+ ....|+|+|||.|. ++++++||++.
T Consensus 43 yv~v~l~~-~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~-----------~~~~~~lG~~~ 110 (134)
T 2b3r_A 43 YVKTYLLP-DTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLSVLSAES-----------LRENFFLGGIT 110 (134)
T ss_dssp EEEEEEES-CSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEEEEECCS-----------SSCCEEEEEEE
T ss_pred EEEEEEEc-CCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEEEEECCC-----------CCCCcEEEEEE
Confidence 57777764 4444578999999999999999999988 6654 33599999999994 46799999999
Q ss_pred EeccccccccceeEEEeccC
Q 010107 78 CTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 78 ~~L~~l~~~~~~~~~~~L~~ 97 (518)
++|.++........|++|.+
T Consensus 111 i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 111 LPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp EEGGGSCTTSCEEEEEECBC
T ss_pred EEhhhccCCCCcceeEECCC
Confidence 99999987777889999966
No 51
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.24 E-value=3.8e-11 Score=105.62 Aligned_cols=113 Identities=16% Similarity=0.173 Sum_probs=85.9
Q ss_pred eEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeecccc-CCCCCceee-eEEeeeccCCCCccEEEEEEeecC
Q 010107 134 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 211 (518)
Q Consensus 134 li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik-~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~ 211 (518)
+.+.+.+|.+|+ |++|||+++...+ ..+||++++ +++||.|+| |.+++..--+.+..|.|.|+|+++
T Consensus 23 L~V~l~~a~~Lp-----g~~Dp~akv~FRg------~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~ 91 (144)
T 3l9b_A 23 LIVHLKTVSELR-----GRADRIAKVTFRG------QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK 91 (144)
T ss_dssp EEEEEEEEESCC-----SCEEEEEEEEETT------EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT
T ss_pred EEEEEEEecCCC-----CCCCCeEEEEEec------cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc
Confidence 445567899998 6899999998842 489999998 699999999 777765444567899999999999
Q ss_pred CCCCcceEEEEEechhhhhccCCCceEEeecccccCCCCCccccceEEEEEe
Q 010107 212 NGKHDLIGKVQKSLADLEKLHSSGQGQNLFLSTAAGNNNHKILNSQLFVDKF 263 (518)
Q Consensus 212 ~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~~~~k~~~k~~~G~i~l~~~ 263 (518)
.+++++||++.++|+++.........-.|++.+. + ...++|.+.-+
T Consensus 92 v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~--~----~~~a~I~l~l~ 137 (144)
T 3l9b_A 92 VFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNN--A----IIKTSLSMEVR 137 (144)
T ss_dssp TSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTS--C----EEEEEEEEEEE
T ss_pred ccCCCEEEEEEEEhHHhccCCeEEEeecccCCCC--C----ccccEEEEEEE
Confidence 9999999999999999986432222344555442 1 12577776543
No 52
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.23 E-value=5.2e-11 Score=104.80 Aligned_cols=82 Identities=13% Similarity=0.277 Sum_probs=63.9
Q ss_pred eEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeecccc-CCCCCceee-eEEeeeccCCCCccEEEEEEeecC
Q 010107 134 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 211 (518)
Q Consensus 134 li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik-~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~ 211 (518)
+.+.+++|++|+. .|++||||++. . . ..||.+++ +++||.||| |.|.+.. ....|.|+|||+|
T Consensus 7 L~V~V~~A~~l~~---~g~~DPYv~v~-~-~------~~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~d- 71 (131)
T 2cjt_A 7 LCVGVKKAKFDGA---QEKFNTYVTLK-V-Q------NVKSTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNKG- 71 (131)
T ss_dssp EEEEEEEEECSSC---GGGCEEEEEEE-E-T------TEEEECCCEESSSCEEEEEEEEEECC---CSSEEEEEEEECC-
T ss_pred EEEEEEEeECCCC---CCCcCeEEEEE-e-c------CEEEeEecCCCCCceECCEEEEEEeC---CCCeEEEEEEECC-
Confidence 4455678998753 68899999998 2 2 23555554 799999999 6666542 3567999999999
Q ss_pred CCCCcceEEEEEechhhhh
Q 010107 212 NGKHDLIGKVQKSLADLEK 230 (518)
Q Consensus 212 ~~~~d~IG~~~i~l~~L~~ 230 (518)
.+++++||++.++|.++..
T Consensus 72 ~~~dd~iG~~~i~l~~l~~ 90 (131)
T 2cjt_A 72 LIWDTMVGTVWIPLRTIRQ 90 (131)
T ss_dssp SSCEEEEEEEEEEGGGSCB
T ss_pred CCCCCeEEEEEEEHHHhhh
Confidence 8899999999999999864
No 53
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.23 E-value=2.3e-11 Score=135.43 Aligned_cols=122 Identities=17% Similarity=0.332 Sum_probs=97.4
Q ss_pred cccceeeeeceeeecCCceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeec
Q 010107 116 KHCGKLTVHAEECINSKTTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQ 194 (518)
Q Consensus 116 ~~~G~I~i~~e~~~~~~~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~ 194 (518)
..+|.|.+++.+. .+.+.+.+++|++|+.+|.+|++|||+++++.++ +.....++|+++++|+||.|++ |.+.+..
T Consensus 158 ~~~g~i~~~~~~~--~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~-~~~~~k~kT~v~~~tlnP~wne~f~f~~~~ 234 (674)
T 3pfq_A 158 ERRGRIYIQAHID--REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPD-PKSESKQKTKTIKSSLNPEWNETFRFQLKE 234 (674)
T ss_dssp CCSCEEEEEEEEC--SSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESC-SSCCSCEECCCCSSCSSCEEEEEEEEECCS
T ss_pred cccccccccceec--cceeeeeeecccccCCCCcccccCcccccccccC-ccccccccccccccccCCCccceeeeeccc
Confidence 4578888877653 4556677899999999999999999999998753 4455689999999999999999 5555443
Q ss_pred cCCCCccEEEEEEeecCCCCCcceEEEEEechhhhhccCCCceEEeec
Q 010107 195 VGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFL 242 (518)
Q Consensus 195 l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n 242 (518)
.+..+.|.|+|||+|..+++++||++.+++.++... +...++.++.
T Consensus 235 -~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~-~~~~w~~Lls 280 (674)
T 3pfq_A 235 -SDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLS 280 (674)
T ss_dssp -TTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHC-CEEEEEECBC
T ss_pred -CCccceeeeEEeecccccccccccccccchhhhccC-Ccccceeecc
Confidence 344677999999999999999999999999999752 3344566654
No 54
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.22 E-value=1.9e-11 Score=112.47 Aligned_cols=85 Identities=16% Similarity=0.235 Sum_probs=72.8
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEE-EecCCcccccccccCccCcceeEEEEEe
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIY-DVDTQFHNVDVKTLKLVEQQFLGEATCT 79 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~Vy-D~D~~~~~~~~~~~~l~~~d~iG~~~~~ 79 (518)
||+|++.. ++++....||+|+++|+||+|+|+|.|.+..+ .+.|+|+|| |.|. ++++++||++.++
T Consensus 55 yv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~-~~~L~~~V~~d~d~-----------~~~d~~iG~~~i~ 121 (171)
T 2q3x_A 55 YVKVYLLE-NGACIAKKKTRIARKTLDPLYQQSLVFDESPQ-GKVLQVIVWGDYGR-----------MDHKCFMGVAQIL 121 (171)
T ss_dssp EEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEECSSCCT-TEEEEEEEEEECST-----------TCSSEEEEEEEEC
T ss_pred eEEEEEEC-CCccccceeCccCCCCCCCCCCcEEEEEecCC-CCEEEEEEEEcCCC-----------CCCCCEEEEEEEE
Confidence 57777765 56778899999999999999999999887543 579999999 9984 4689999999999
Q ss_pred ccccccccceeEEEeccCC
Q 010107 80 LSQIVTRKNRSLTLDLVRR 98 (518)
Q Consensus 80 L~~l~~~~~~~~~~~L~~~ 98 (518)
|.++........|++|..+
T Consensus 122 l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 122 LEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp GGGSCTTSCEEEEEECBCG
T ss_pred HHHcccCCCcceeEECCCc
Confidence 9999877778899999763
No 55
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.22 E-value=3.8e-11 Score=105.37 Aligned_cols=98 Identities=19% Similarity=0.328 Sum_probs=70.8
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccC---cceeEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVE---QQFLGEAT 77 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~---~d~iG~~~ 77 (518)
||+|++... + +..||+++++|+||+|+++|.+.+... +.|.|+|||.|.. ++ ++|||++.
T Consensus 29 yv~v~~~~~-~---~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~~-----------~~~~~d~~lG~~~ 91 (132)
T 3pyc_A 29 FAKIVVDGS-G---QCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKKI-----------HKKQGAGFLGCVR 91 (132)
T ss_dssp EEEEEETTT-C---CEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGGT-----------TSSTTTTEEEEEE
T ss_pred EEEEEECCC-C---ceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCCC-----------CCCCCCCceEEEE
Confidence 567776432 2 589999999999999999998877643 4699999999953 33 89999999
Q ss_pred Eeccccc-cccceeEEEeccCCcccccccccCCCCCCCCcccceeeeece
Q 010107 78 CTLSQIV-TRKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAE 126 (518)
Q Consensus 78 ~~L~~l~-~~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e 126 (518)
++|.+|. .......|++|..+ .+....+..|+|++.+.
T Consensus 92 i~l~~l~~~~~~~~~~~~L~~~-----------~~~~~~~~~G~i~v~l~ 130 (132)
T 3pyc_A 92 LLSNAISRLKDTGYQRLDLCKL-----------NPSDTDAVRGQIVVSLQ 130 (132)
T ss_dssp ECHHHHHHHTTSCCEEEECBCS-----------STTCCCCCCSEEEEEEE
T ss_pred EeHHHhhcccccCcEEEeeeec-----------CCCCCCceeEEEEEEEE
Confidence 9999983 33444677888552 10001245788888753
No 56
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.21 E-value=1.9e-11 Score=107.75 Aligned_cols=96 Identities=19% Similarity=0.226 Sum_probs=75.9
Q ss_pred CEEEEEEcCCCcEEEEEeeeeee-CCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEe
Q 010107 1 MLVVYMKARDGALVEVGRTEVVL-NSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCT 79 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~-~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~ 79 (518)
||+|++.. +..||++++ +++||+|+|+|.|.+.. ..+.|+|+|||.|. ++++++||++.++
T Consensus 34 yv~v~~~~------~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~-----------~~~d~~lG~~~i~ 95 (136)
T 1wfj_A 34 YVQLTCRT------QDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDV-----------GTEDDAVGEATIP 95 (136)
T ss_dssp CEEEESSS------CEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSS-----------CTTTCCSEEEEEE
T ss_pred eEEEEECC------ccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCC-----------CCCCceEEEEEEE
Confidence 56666643 246999999 99999999999999874 66799999999994 4689999999999
Q ss_pred cccccc-ccceeEEEeccCCcccccccccCCCCCCCCcccceeeeeceeeec
Q 010107 80 LSQIVT-RKNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECIN 130 (518)
Q Consensus 80 L~~l~~-~~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~~~ 130 (518)
|.++.. ......|++|.. . .+..|+|++++.+.+.
T Consensus 96 l~~l~~~~~~~~~w~~L~~-----------~-----~~~~G~i~l~l~~~p~ 131 (136)
T 1wfj_A 96 LEPVFVEGSIPPTAYNVVK-----------D-----EEYKGEIWVALSFKPS 131 (136)
T ss_dssp SHHHHHHSEEEEEEEEEEE-----------T-----TEEEEEEEEEEEEEEC
T ss_pred HHHhccCCCCCcEEEEeec-----------C-----CccCEEEEEEEEEEeC
Confidence 999954 333567888853 1 2558999999888764
No 57
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.21 E-value=1.1e-11 Score=112.28 Aligned_cols=85 Identities=14% Similarity=0.127 Sum_probs=67.6
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCc--eeEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~--~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||.|++...++......||+++++|+||+|+|+|.|.+..+. ...|+|+|||+|. ++++++||++.+
T Consensus 67 yVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V~d~d~-----------~~~~d~iG~~~i 135 (155)
T 2z0u_A 67 NIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDVCTTDR-----------SHLEECLGGAQI 135 (155)
T ss_dssp EEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEEEEECT-----------TSCEEEEEEEEE
T ss_pred EEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEEEECCC-----------CCCCcEEEEEEE
Confidence 466777653333345789999999999999999998865443 3589999999995 468999999999
Q ss_pred eccccc-cccceeEEEecc
Q 010107 79 TLSQIV-TRKNRSLTLDLV 96 (518)
Q Consensus 79 ~L~~l~-~~~~~~~~~~L~ 96 (518)
+|.++. .......|++|.
T Consensus 136 ~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 136 SLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp ECTTSCTTCCCEEEEEEEB
T ss_pred EHHHccCCCCccccceEcc
Confidence 999996 355678898874
No 58
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.20 E-value=1.2e-11 Score=110.76 Aligned_cols=86 Identities=19% Similarity=0.261 Sum_probs=71.6
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++.. ++++....||+++++|+||+|+++|.|.+..+.. ..|+|+|||.|. ++++++||++.+
T Consensus 48 yv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~d~d~-----------~~~~~~iG~~~i 115 (148)
T 3fdw_A 48 YVKTYLLP-DKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVWHHGR-----------FGRNTFLGEAEI 115 (148)
T ss_dssp EEEEEEET-CCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEEEECG-----------GGCEEEEEEEEE
T ss_pred EEEEEEEc-CCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEEECCC-----------CcCCcEEEEEEE
Confidence 57777764 3444568999999999999999999998766543 489999999994 568999999999
Q ss_pred eccccccccceeEEEeccCC
Q 010107 79 TLSQIVTRKNRSLTLDLVRR 98 (518)
Q Consensus 79 ~L~~l~~~~~~~~~~~L~~~ 98 (518)
+|.++........|++|.++
T Consensus 116 ~l~~l~~~~~~~~W~~L~~~ 135 (148)
T 3fdw_A 116 QMDSWKLDKKLDHCLPLHGK 135 (148)
T ss_dssp EHHHHHHHCCSEEEEECBCC
T ss_pred EcccccccCCccceEECcCc
Confidence 99999877778899999763
No 59
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.19 E-value=2.8e-11 Score=107.61 Aligned_cols=83 Identities=19% Similarity=0.309 Sum_probs=69.0
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++..... +..||+++++++||+|+++|.|.+..+.. ..|+|+|||.|. ++++++||++.+
T Consensus 58 yv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~-----------~~~~~~iG~~~i 123 (143)
T 3f04_A 58 YVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR-----------FSKHDIIGEFKV 123 (143)
T ss_dssp EEEEEEESCCS---CCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS-----------SSCCEEEEEEEE
T ss_pred EEEEEEECCCC---ccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCCC-----------CCCCceEEEEEE
Confidence 57777754332 47899999999999999999888765433 699999999994 468999999999
Q ss_pred eccccccccceeEEEeccC
Q 010107 79 TLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 79 ~L~~l~~~~~~~~~~~L~~ 97 (518)
+|.++........|++|..
T Consensus 124 ~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 124 PMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp EGGGCCTTSCEEEEEECBC
T ss_pred EHHHccCCCCcceEEECcC
Confidence 9999988778889999854
No 60
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.18 E-value=2.5e-11 Score=107.82 Aligned_cols=85 Identities=20% Similarity=0.310 Sum_probs=69.8
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEE-EEeCc--eeEEEEEEEEecCCcccccccccCccCcceeEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFEV--VQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEAT 77 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~-~~fe~--~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~ 77 (518)
||+|++.. ++.+....||+++++++||+|+++|.|. +..+. ...|+|+|||.|. ++++++||++.
T Consensus 53 yv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~-----------~~~d~~iG~~~ 120 (142)
T 2chd_A 53 YVKLHLLP-GASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCDEDK-----------FGHNEFIGETR 120 (142)
T ss_dssp EEEEEEES-CCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEEECT-----------TSCEEEEEEEE
T ss_pred EEEEEEEc-CCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEECCC-----------CCCCcEEEEEE
Confidence 57777764 3334568999999999999999999877 54333 2589999999994 46799999999
Q ss_pred EeccccccccceeEEEeccC
Q 010107 78 CTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 78 ~~L~~l~~~~~~~~~~~L~~ 97 (518)
++|.++........|++|..
T Consensus 121 i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 121 FSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEGGGCCTTCCEEEEEECBC
T ss_pred EEHHHcCCCCccEEEEeccc
Confidence 99999998888899999865
No 61
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.15 E-value=8.5e-11 Score=103.90 Aligned_cols=83 Identities=16% Similarity=0.303 Sum_probs=67.1
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEE-EEeCce--eEEEEEEEEecCCcccccccccCccCcceeEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEAT 77 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~-~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~ 77 (518)
||+|++..... +..||+++++++||+|+++|.|. +..+.. ..|+|+|||.|. ++++++||++.
T Consensus 47 yv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~d~-----------~~~~~~lG~~~ 112 (138)
T 1ugk_A 47 YIKMTILPEKK---HKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR-----------FSRDDIIGEVL 112 (138)
T ss_dssp EEEEEEETTTC---SEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEECS-----------SCCCCCCEEEE
T ss_pred EEEEEEecCCC---ceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEECCC-----------CCCCcEEEEEE
Confidence 57787765222 58999999999999999999985 655533 599999999994 46899999999
Q ss_pred Eeccccccccce-eEEEeccC
Q 010107 78 CTLSQIVTRKNR-SLTLDLVR 97 (518)
Q Consensus 78 ~~L~~l~~~~~~-~~~~~L~~ 97 (518)
++|.++....+. ..|++|..
T Consensus 113 i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 113 IPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EECTTCCCTTCCEEEEEECBS
T ss_pred EehhHccCCCCcchhhhhhhc
Confidence 999999876544 57788865
No 62
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.15 E-value=4.4e-11 Score=105.31 Aligned_cols=84 Identities=18% Similarity=0.277 Sum_probs=69.0
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeC-ceeEEEEEEEEecCCcccccccccCccCcceeEEEEEe
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE-VVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCT 79 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe-~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~ 79 (518)
||+|++.. +++.....||+++++++||+|+++|.+.+... ..+.|+|+|||.|. ++++++||++.++
T Consensus 40 yv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~-----------~~~~~~iG~~~i~ 107 (137)
T 3rdl_A 40 YVKLKLIP-DPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR-----------TTRNDFMGSLSFG 107 (137)
T ss_dssp EEEEEEEC-CTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS-----------SSCCEEEEEEEEE
T ss_pred eEEEEEEc-CCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC-----------CCCCceEEEEEEe
Confidence 57777754 33345689999999999999999999987654 33589999999994 4689999999999
Q ss_pred ccccccccceeEEEeccC
Q 010107 80 LSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 80 L~~l~~~~~~~~~~~L~~ 97 (518)
|+++.... ...|++|.+
T Consensus 108 l~~l~~~~-~~~W~~L~~ 124 (137)
T 3rdl_A 108 VSELMKMP-ASGWYKLLN 124 (137)
T ss_dssp HHHHHHSC-EEEEEECBC
T ss_pred HHHhccCc-cCceEECcC
Confidence 99998765 788999966
No 63
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.15 E-value=5.5e-11 Score=107.03 Aligned_cols=83 Identities=19% Similarity=0.289 Sum_probs=68.5
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCc--eeEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~--~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++....+ +..||+++++++||+|+++|.|.+..+. .+.|+|+|||.|. ++++++||++.+
T Consensus 66 yv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~-----------~~~~~~iG~~~i 131 (152)
T 1rsy_A 66 YVKVFLLPDKK---KKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFDR-----------FSKHDIIGEFKV 131 (152)
T ss_dssp EEEEEEETTCC---SCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEECCS-----------SSCCEEEEEEEE
T ss_pred EEEEEEEcCCC---ceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEECCC-----------CCCCcEEEEEEE
Confidence 57777764222 4789999999999999999999876543 4689999999994 468999999999
Q ss_pred eccccccccceeEEEeccC
Q 010107 79 TLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 79 ~L~~l~~~~~~~~~~~L~~ 97 (518)
+|.++........|++|.+
T Consensus 132 ~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 132 PMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp EGGGCCCSSCEEEEEECBC
T ss_pred EchhccCCCCcceEEECCC
Confidence 9999977667788999965
No 64
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.14 E-value=2.8e-11 Score=108.27 Aligned_cols=83 Identities=14% Similarity=0.232 Sum_probs=68.2
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++....+ ...||+++++++||+|+|+|.|.+..+.. ..|+|+|||.|. ++++++||++.+
T Consensus 57 yv~v~l~~~~~---~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d~-----------~~~~~~iG~~~i 122 (147)
T 2enp_A 57 YVKICLLPDQK---NSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDK-----------FSRHCVIGKVSV 122 (147)
T ss_dssp EEEEEEETCCS---SCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEEEEECCST-----------TCCSCCCEEEEE
T ss_pred EEEEEEEeCCC---cceEeecccCCCCCeEeeeEEEEeChHHhccCEEEEEEEECCC-----------CcCCcEEEEEEE
Confidence 57777765322 36799999999999999999988765433 489999999994 468999999999
Q ss_pred eccccccccceeEEEeccC
Q 010107 79 TLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 79 ~L~~l~~~~~~~~~~~L~~ 97 (518)
+|.++........|++|..
T Consensus 123 ~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 123 PLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp ETTTSCTTTCCCEEECCBC
T ss_pred echhcCCCCCccEEEEeec
Confidence 9999987777788999966
No 65
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.14 E-value=4.7e-11 Score=107.09 Aligned_cols=84 Identities=18% Similarity=0.246 Sum_probs=69.4
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCc-eeEEEEEEEEecCCcccccccccCccCcceeEEEEEe
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV-VQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCT 79 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~-~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~ 79 (518)
||+|++.. ++++....||+++++++||+|+++|.|.+..+. .+.|+|+|||.|. ++++++||++.++
T Consensus 55 yv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~-----------~~~~~~iG~~~i~ 122 (149)
T 1a25_A 55 YVKLKLIP-DPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL-----------TSRNDFMGSLSFG 122 (149)
T ss_dssp EEEEEEES-CTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS-----------SSCCEEEEEEEEE
T ss_pred EEEEEEEC-CCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC-----------CCCCCEEEEEEEE
Confidence 57777775 344456889999999999999999999876542 4689999999994 4689999999999
Q ss_pred ccccccccceeEEEeccC
Q 010107 80 LSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 80 L~~l~~~~~~~~~~~L~~ 97 (518)
|.++... ....|++|.+
T Consensus 123 l~~l~~~-~~~~W~~L~~ 139 (149)
T 1a25_A 123 ISELQKA-GVDGWFKLLS 139 (149)
T ss_dssp HHHHTTC-CEEEEEECBC
T ss_pred HHHhCcC-ccCCeEEccC
Confidence 9999866 4778999966
No 66
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.13 E-value=5.3e-11 Score=103.75 Aligned_cols=83 Identities=22% Similarity=0.320 Sum_probs=63.4
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEE-EeC--ceeEEEEEEEEecCCcccccccccCccC--cceeEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITY-QFE--VVQTLVFRIYDVDTQFHNVDVKTLKLVE--QQFLGE 75 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~-~fe--~~q~L~~~VyD~D~~~~~~~~~~~~l~~--~d~iG~ 75 (518)
||+|++.. ++......||+++++|+||+|+|+|.+.+ ..+ ..+.|+|+|||.|. +++ +++||+
T Consensus 42 yv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~d~d~-----------~~~~~~~~lG~ 109 (129)
T 2bwq_A 42 YVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR-----------VREEESEFLGE 109 (129)
T ss_dssp EEEEEEES-SCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEEEC------------------CEEEEE
T ss_pred EEEEEEec-CCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEEECCc-----------CcCcCCceeEE
Confidence 57777764 33335689999999999999999999884 433 34699999999995 344 999999
Q ss_pred EEEeccccccccceeEEEecc
Q 010107 76 ATCTLSQIVTRKNRSLTLDLV 96 (518)
Q Consensus 76 ~~~~L~~l~~~~~~~~~~~L~ 96 (518)
+.++|+++.... ...|++|+
T Consensus 110 ~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 110 ILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEEGGGCCCSS-CEEEEECC
T ss_pred EEEEccccCCCc-CCccEECc
Confidence 999999998654 77898874
No 67
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.13 E-value=1.9e-10 Score=126.38 Aligned_cols=106 Identities=17% Similarity=0.216 Sum_probs=82.6
Q ss_pred ceEEEEEeecCCCcCCC--CCCCCcEEEEEEEecCCceeeEeeeccccCC-CCCceee-eEEeeeccCCCCccEEEEEEe
Q 010107 133 TTTELILRCSDLDCKDL--FSRNDPFLVISKIVESGTHIPVCKTEVLKNE-TKPTWKS-VFLNIQQVGSKDSPLIIECFN 208 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~--~g~sDPyv~i~~~~~~~~~~~~~kTevik~t-lnP~W~e-f~~~~~~l~~~~~~L~veV~D 208 (518)
.+.+.+++|++|+.+|. .+.+||||++.+.+. ......+||++++++ +||+||| |.|.+.. +....|+|+|||
T Consensus 498 ~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~-~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~--~el~~L~~~V~D 574 (624)
T 1djx_A 498 RLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGV-GRDTGSRQTAVITNNGFNPRWDMEFEFEVTV--PDLALVRFMVED 574 (624)
T ss_dssp EEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESS-GGGCEEEECCCCTTCSSSCEEEEEEEEEESC--GGGCEEEEEEEE
T ss_pred EEEEEEEEcCCCCcccccccCCCCcEEEEEEecC-CCCcceeecccccCCCCCCccCceEEEEEec--CCCCEEEEEEEE
Confidence 34555789999999884 789999999998642 112357899999998 9999999 6655542 123679999999
Q ss_pred ecCCCCCcceEEEEEechhhhhccCCCceEEeeccc
Q 010107 209 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 244 (518)
Q Consensus 209 ~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~ 244 (518)
+|..+++++||++.+++.+|.. + .++++|.+.+
T Consensus 575 ~D~~~~dd~iG~~~ipl~~L~~--G-~r~v~L~d~~ 607 (624)
T 1djx_A 575 YDSSSKNDFIGQSTIPWNSLKQ--G-YRHVHLLSKN 607 (624)
T ss_dssp CCSSSCCEEEEEEEEEGGGBCC--E-EEEEEEECTT
T ss_pred cCCCCCCceeEEEEEEHHHcCC--C-cEEEeCCCCC
Confidence 9999999999999999999964 2 3467776643
No 68
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.12 E-value=4.2e-11 Score=132.98 Aligned_cols=102 Identities=14% Similarity=0.220 Sum_probs=81.8
Q ss_pred ceEEEEEeecCCCc---CCCCCCCCcEEEEEEEecCCceeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEe
Q 010107 133 TTTELILRCSDLDC---KDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFN 208 (518)
Q Consensus 133 ~li~~~i~a~~L~~---~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D 208 (518)
.+.+.+++|++|+. +|.+|++||||++++.+. ....+||+++++++||+||| |.+.+... ....|+|+|||
T Consensus 19 ~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~---~~~k~kTkvik~tlNPvWNEtF~F~v~~~--~~~~L~~~V~D 93 (749)
T 1cjy_A 19 KFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTT---PDSRKRTRHFNNDINPVWNETFEFILDPN--QENVLEITLMD 93 (749)
T ss_dssp EEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTS---TTCCEECCCCTTCSSCEEEEEEEEEECTT--SCCBCEEEEEE
T ss_pred EEEEEEEEEECCCCccccCCCCCcCeEEEEEEecC---CCCeEecceEcCCCCCeeeeEEEEEecCC--CCCEEEEEEEE
Confidence 45566789999999 899999999999998642 22578999999999999998 66666532 35789999999
Q ss_pred ecCCCCCcceEEEEEechhhhhccCCCceEEe
Q 010107 209 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQNL 240 (518)
Q Consensus 209 ~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l 240 (518)
+|..+ +++||++.+++.+|........++.|
T Consensus 94 ~D~~~-ddfIG~v~I~L~~L~~g~~~~~w~~L 124 (749)
T 1cjy_A 94 ANYVM-DETLGTATFTVSSMKVGEKKEVPFIF 124 (749)
T ss_dssp CCSSS-CEEEEEECCBSTTSCTTCCCCEEEEE
T ss_pred CCCCC-CceeEEEEEEHHHcCCCCceEEEEec
Confidence 99998 99999999999999643323344554
No 69
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.12 E-value=9.7e-11 Score=103.91 Aligned_cols=83 Identities=20% Similarity=0.363 Sum_probs=67.6
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEE-EeC--ceeEEEEEEEEecCCcccccccccCccCcceeEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITY-QFE--VVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEAT 77 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~-~fe--~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~ 77 (518)
||+|++..... ...||+++++++||+|+|+|.|.. ..+ ....|+|+|||.|. ++++++||++.
T Consensus 50 yv~v~~~~~~~---~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~-----------~~~~~~iG~~~ 115 (141)
T 2d8k_A 50 FVKIYLLPDKK---HKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDR-----------FSRNDPIGEVS 115 (141)
T ss_dssp EEEEEEESCCS---SEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECCS-----------SSSCEEEEEEE
T ss_pred EEEEEEECCCC---ccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECCC-----------CCCCcEEEEEE
Confidence 57777764322 378999999999999999998873 222 23689999999994 46899999999
Q ss_pred EeccccccccceeEEEeccC
Q 010107 78 CTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 78 ~~L~~l~~~~~~~~~~~L~~ 97 (518)
++|.++........|++|..
T Consensus 116 i~l~~l~~~~~~~~W~~L~~ 135 (141)
T 2d8k_A 116 IPLNKVDLTQMQTFWKDLKP 135 (141)
T ss_dssp EETTTSCTTSCEEEEECCEE
T ss_pred EEhhhhcCCCCccEEEECcC
Confidence 99999988777889999966
No 70
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.11 E-value=1.4e-10 Score=106.31 Aligned_cols=82 Identities=12% Similarity=0.262 Sum_probs=64.5
Q ss_pred eEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeecccc-CCCCCceee-eEEeeeccCCCCccEEEEEEeecC
Q 010107 134 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLK-NETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNS 211 (518)
Q Consensus 134 li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik-~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~ 211 (518)
+.+.+++|++|+ ..|++||||++. . . .+||.+++ +++||.||| |.|.+.. ....|.|+|||+|
T Consensus 16 L~V~V~~A~~l~---~~g~~DPYV~v~-~-~------~~kt~~~~~~t~nP~WnE~f~f~v~~---~~~~L~~~V~D~d- 80 (167)
T 2cjs_A 16 LCVGVKKAKFDG---AQEKFNTYVTLK-V-Q------NVESTTIAVRGSQPSWEQDFMFEINR---LDLGLTVEVWNKG- 80 (167)
T ss_dssp EEEEEEEEECSS---CGGGCEEEEEEE-E-T------TEEEECCCEESSSCEEEEEEEEECCC---TTSEEEEEEEECC-
T ss_pred EEEEEEEEECCC---CCCCCCeEEEEE-e-c------ceEEEEecCCCCCCCCCCEEEEEeeC---CCCEEEEEEEECC-
Confidence 445567888774 368899999998 2 2 24666665 699999999 6666543 3567999999999
Q ss_pred CCCCcceEEEEEechhhhh
Q 010107 212 NGKHDLIGKVQKSLADLEK 230 (518)
Q Consensus 212 ~~~~d~IG~~~i~l~~L~~ 230 (518)
.+++++||++.++|.++..
T Consensus 81 ~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 81 LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp SSCCEEEEEEEEEGGGSCB
T ss_pred CCCCceEEEEEEEHHHhcc
Confidence 8889999999999999864
No 71
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.10 E-value=3.7e-11 Score=106.75 Aligned_cols=86 Identities=20% Similarity=0.231 Sum_probs=68.2
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecCCcccccccccCcc-CcceeEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLV-EQQFLGEAT 77 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~-~~d~iG~~~ 77 (518)
||+|++.. ++++....||+++++|+||+|+|+|.|.+..+.. ..|+|+|||.|.. .. ++++||++.
T Consensus 47 yv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~~----------~~~~~~~iG~~~ 115 (142)
T 2dmg_A 47 YVRMYLLP-DKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNSGGF----------LSKDKGLLGKVL 115 (142)
T ss_dssp EEEEEEES-CCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEECCCS----------SCCSCCCCEEEE
T ss_pred eEEEEEEc-CCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEECCCc----------cccCCcEEEEEE
Confidence 57787764 3334568899999999999999999988754433 4999999999952 12 357999999
Q ss_pred EeccccccccceeEEEeccC
Q 010107 78 CTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 78 ~~L~~l~~~~~~~~~~~L~~ 97 (518)
++|.++........|++|.+
T Consensus 116 i~l~~~~~~~~~~~W~~L~~ 135 (142)
T 2dmg_A 116 VALASEELAKGWTQWYDLTE 135 (142)
T ss_dssp EECCCSTTTTCBCCBCCCBC
T ss_pred EecccccccccccceeeccC
Confidence 99999987667778999866
No 72
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.10 E-value=1.2e-11 Score=109.87 Aligned_cols=86 Identities=29% Similarity=0.406 Sum_probs=69.2
Q ss_pred CEEEEEEcCCCcE--------EEEEeeeeeeCCCCCceeeEEEEE-EEeC--ceeEEEEEEEEecCCcccccccccCccC
Q 010107 1 MLVVYMKARDGAL--------VEVGRTEVVLNSLNPTWITKHIIT-YQFE--VVQTLVFRIYDVDTQFHNVDVKTLKLVE 69 (518)
Q Consensus 1 ~~vv~~~~~~~~~--------~ev~rTevi~~~lNP~f~~~f~~~-~~fe--~~q~L~~~VyD~D~~~~~~~~~~~~l~~ 69 (518)
||+|++....+++ ....||+++++|+||+|++.|.|. +..+ ....|+|+|||.|. +++
T Consensus 42 yv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~-----------~~~ 110 (142)
T 1rh8_A 42 FVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDR-----------FSS 110 (142)
T ss_dssp EEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECS-----------SSC
T ss_pred eEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCC-----------CCC
Confidence 5777776544332 246899999999999999999886 5544 34599999999994 468
Q ss_pred cceeEEEEEeccccccccceeEEEeccC
Q 010107 70 QQFLGEATCTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 70 ~d~iG~~~~~L~~l~~~~~~~~~~~L~~ 97 (518)
+++||++.++|.++........|++|.+
T Consensus 111 ~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 138 (142)
T 1rh8_A 111 NDFLGEVLIDLSSTSHLDNTPRWYPLKE 138 (142)
T ss_dssp EEEEEEEEEETTSCGGGTTCCEEEECBC
T ss_pred CceEEEEEEeccccccCCCCCeEEECCc
Confidence 9999999999999987667789999976
No 73
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.10 E-value=8.4e-11 Score=106.01 Aligned_cols=85 Identities=13% Similarity=0.189 Sum_probs=67.0
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce-eEEEEEEEEecCCcccccccccCccC-cceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV-QTLVFRIYDVDTQFHNVDVKTLKLVE-QQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~-q~L~~~VyD~D~~~~~~~~~~~~l~~-~d~iG~~~~ 78 (518)
||.|++.. ++......||+++++|+||+|+++|.|.+..+.. +.|+|+|||.|. +++ ++|||++.+
T Consensus 50 yv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~-----------~~~~d~~lG~~~i 117 (153)
T 3fbk_A 50 YVKISLIP-EDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTVWNRAS-----------QSRQSGLIGCMSF 117 (153)
T ss_dssp EEEEEEES-CSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEEEECCS-----------SGGGCEEEEEEEE
T ss_pred EEEEEEEc-CCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEEEeCCC-----------CCCCCcEEEEEEE
Confidence 46777764 2223467899999999999999999988744433 579999999995 345 899999999
Q ss_pred ecccccc-ccceeEEEeccC
Q 010107 79 TLSQIVT-RKNRSLTLDLVR 97 (518)
Q Consensus 79 ~L~~l~~-~~~~~~~~~L~~ 97 (518)
+|.+|.. ......|++|.+
T Consensus 118 ~l~~l~~~~~~~~~W~~L~~ 137 (153)
T 3fbk_A 118 GVKSLLTPDKEISGWYYLLG 137 (153)
T ss_dssp EHHHHTC--CCEEEEEECBC
T ss_pred EHHHhcCCCCccccEEECCC
Confidence 9999984 566788999976
No 74
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.06 E-value=5e-10 Score=98.51 Aligned_cols=71 Identities=18% Similarity=0.254 Sum_probs=59.8
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||.|++.. ++++....||+++++++||+|+|+|.|.+..+.. ..|+|+|||.|. ++++++||++.+
T Consensus 40 yv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d~~~-----------~~~~~~lG~~~i 107 (138)
T 3n5a_A 40 YVKVWLMY-KDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMDKDK-----------LSRNDVIGKIYL 107 (138)
T ss_dssp EEEEEEEE-TTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEECCS-----------SSCCEEEEEEEE
T ss_pred EEEEEEEe-CCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEECCC-----------CCCCcEEEEEEE
Confidence 57777765 4456789999999999999999999998765543 689999999994 468999999999
Q ss_pred ecccc
Q 010107 79 TLSQI 83 (518)
Q Consensus 79 ~L~~l 83 (518)
+|.++
T Consensus 108 ~l~~~ 112 (138)
T 3n5a_A 108 SWKSG 112 (138)
T ss_dssp SSSSC
T ss_pred ccccC
Confidence 99974
No 75
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.06 E-value=5.7e-11 Score=105.16 Aligned_cols=84 Identities=21% Similarity=0.323 Sum_probs=65.9
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEE-EEeCc--eeEEEEEEEEecCCcccccccccCccC--cceeEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIIT-YQFEV--VQTLVFRIYDVDTQFHNVDVKTLKLVE--QQFLGE 75 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~-~~fe~--~q~L~~~VyD~D~~~~~~~~~~~~l~~--~d~iG~ 75 (518)
||+|++.. ++.+.+..||+++++|+||+|+|+|.|. +..+. .+.|+|+|||.|. +++ +++||+
T Consensus 45 yv~v~~~~-~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d~-----------~~~~~~~~lG~ 112 (141)
T 1v27_A 45 YVKIYFLP-DRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQAR-----------VREEESEFLGE 112 (141)
T ss_dssp EEECCCSS-CCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEEBCS-----------SSSCCBCCCEE
T ss_pred EEEEEEec-CCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEECCC-----------CcCCCCceEEE
Confidence 35555533 2234568899999999999999999988 44443 3699999999995 344 999999
Q ss_pred EEEeccccccccceeEEEeccC
Q 010107 76 ATCTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 76 ~~~~L~~l~~~~~~~~~~~L~~ 97 (518)
+.++|.++.... ...|++|..
T Consensus 113 ~~i~l~~l~~~~-~~~W~~L~~ 133 (141)
T 1v27_A 113 ILIELETALLDD-EPHWYKLQT 133 (141)
T ss_dssp EEEEGGGCCCSS-EEEEEECBC
T ss_pred EEEEccccCCCC-CCceEECcc
Confidence 999999997654 788999976
No 76
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.05 E-value=4.5e-10 Score=101.04 Aligned_cols=70 Identities=11% Similarity=0.133 Sum_probs=59.7
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++.. ++++....||+++++|+||+|+|+|.|.+..+.. ..|+|+|||.|. ++++++||++.+
T Consensus 54 yv~v~~~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~d~-----------~~~~~~lG~~~i 121 (153)
T 1w15_A 54 YVKVNLYH-AKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER-----------GSRNEVIGRLVL 121 (153)
T ss_dssp EEEEEEEE-TTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEECCT-----------TSCCEEEEEEEE
T ss_pred EEEEEEEe-CCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeCCC-----------CCCCcEEEEEEE
Confidence 57777765 5566778999999999999999999998776543 689999999994 468999999999
Q ss_pred eccc
Q 010107 79 TLSQ 82 (518)
Q Consensus 79 ~L~~ 82 (518)
+|.+
T Consensus 122 ~l~~ 125 (153)
T 1w15_A 122 GATA 125 (153)
T ss_dssp STTC
T ss_pred CCCC
Confidence 9988
No 77
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.04 E-value=6.5e-10 Score=100.68 Aligned_cols=85 Identities=15% Similarity=0.259 Sum_probs=67.9
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++.. ++++....||+++++++||+|+++|.|.+..+.. ..|+|+|||.|. ++++++||++.+
T Consensus 49 yv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~d~-----------~~~~~~iG~~~i 116 (159)
T 1tjx_A 49 YVKIHLMQ-NGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK-----------IGKNDAIGKVFV 116 (159)
T ss_dssp EEEEEEEE-TTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS-----------SSCCEEEEEEEE
T ss_pred EEEEEEEe-CCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEECCC-----------CCCCceEEEEEE
Confidence 57787765 4566789999999999999999999998866543 489999999994 468999999999
Q ss_pred eccc----------cccc--cceeEEEeccC
Q 010107 79 TLSQ----------IVTR--KNRSLTLDLVR 97 (518)
Q Consensus 79 ~L~~----------l~~~--~~~~~~~~L~~ 97 (518)
+|.. ++.. .....|.+|..
T Consensus 117 ~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~ 147 (159)
T 1tjx_A 117 GYNSTGAELRHWSDMLANPRRPIAQWHTLQV 147 (159)
T ss_dssp ETTCCHHHHHHHHHHHHSTTCCEEEEEECBC
T ss_pred CCCCCCcHHHHHHHHHHCCCCeeeeEEECcC
Confidence 9985 3333 24567888865
No 78
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.00 E-value=7.4e-10 Score=101.12 Aligned_cols=71 Identities=15% Similarity=0.286 Sum_probs=58.0
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCc--eeEEEEEEEEecCCcccccccccCccCcceeEEEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEV--VQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATC 78 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~--~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~ 78 (518)
||+|++.. ++......||+++++++||+|+++|.|.+..+. ...|+|+|||.|. ++++++||++.+
T Consensus 61 yv~v~l~~-~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d~-----------~~~~~~iG~~~i 128 (166)
T 2cm5_A 61 FVKLWLKP-DMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI-----------GKSNDYIGGCQL 128 (166)
T ss_dssp EEEEEEET-C---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEECCS-----------SSCCEEEEEEEE
T ss_pred EEEEEEEC-CCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEECCC-----------CCCCcEEEeEEE
Confidence 57788865 333457899999999999999999999886554 3499999999994 468999999999
Q ss_pred ecccc
Q 010107 79 TLSQI 83 (518)
Q Consensus 79 ~L~~l 83 (518)
+|.++
T Consensus 129 ~l~~~ 133 (166)
T 2cm5_A 129 GISAK 133 (166)
T ss_dssp ETTCC
T ss_pred ecccC
Confidence 99985
No 79
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=98.97 E-value=6.7e-10 Score=119.34 Aligned_cols=91 Identities=20% Similarity=0.291 Sum_probs=74.0
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++.. +.+||+|+++|+||+|+++|.+.+.....+.|+|+|||+|. ++++||||++.++|
T Consensus 411 yv~v~~~~------~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~-----------~~~~d~lG~~~~~l 473 (510)
T 3jzy_A 411 YCEISMGS------QSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ-----------FSPDDFLGRTEIPV 473 (510)
T ss_dssp EEEEEETT------EEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS-----------SSSCCEEEEEEEEH
T ss_pred EEEEEECC------eeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC-----------CCCCCceEEEEEEH
Confidence 46666622 57899999999999999999999877777899999999994 46899999999999
Q ss_pred cccccccc----eeEEEeccCCcccccccccCCCCCCCCcccceeeeece
Q 010107 81 SQIVTRKN----RSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAE 126 (518)
Q Consensus 81 ~~l~~~~~----~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e 126 (518)
+++..... ...|++|.+ ...|+|+++++
T Consensus 474 ~~l~~~~~~~~~~~~~~~l~~------------------~~~G~i~l~~~ 505 (510)
T 3jzy_A 474 AKIRTEQESKGPMTRRLLLHE------------------VPTGEVWVRFD 505 (510)
T ss_dssp HHHHHHHHHHCSCCEEEECBS------------------SSSCEEEEEEE
T ss_pred HHhccccCCCCceeeeecCCC------------------CCCceEEEEEE
Confidence 99986543 567888755 23688887765
No 80
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=98.94 E-value=1.5e-09 Score=116.98 Aligned_cols=74 Identities=26% Similarity=0.351 Sum_probs=59.6
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEE-eCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEe
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQ-FEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCT 79 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~-fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~ 79 (518)
||+|++. + +.+||+||++|+||+|+++|.|.+. ++..+.|+|+|||+|. +++|||||+++++
T Consensus 417 YV~v~l~---~---~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~-----------~~~dD~LG~~~~~ 479 (540)
T 3nsj_A 417 YLKVFFG---G---QEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY-----------GWDDDLLGSCDRS 479 (540)
T ss_dssp EEEEEET---T---EEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS-----------SSCCEEEEEEEEC
T ss_pred EEEEEEC---C---EeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC-----------CCCCCEEEEEEEE
Confidence 4566663 2 3499999999999999999999864 5678899999999995 3679999999999
Q ss_pred ccccccccceeEEEec
Q 010107 80 LSQIVTRKNRSLTLDL 95 (518)
Q Consensus 80 L~~l~~~~~~~~~~~L 95 (518)
|.. .....|++|
T Consensus 480 L~~----g~~~~~~~l 491 (540)
T 3nsj_A 480 PHS----GFHEVTCEL 491 (540)
T ss_dssp CCS----EEEEEEEEC
T ss_pred eeC----CcEEEEEEc
Confidence 882 224667776
No 81
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.76 E-value=7.1e-10 Score=118.53 Aligned_cols=99 Identities=16% Similarity=0.137 Sum_probs=7.2
Q ss_pred ceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCC---CCCceee-eEEeeeccCCCCccEEEEEEe
Q 010107 133 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNE---TKPTWKS-VFLNIQQVGSKDSPLIIECFN 208 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~t---lnP~W~e-f~~~~~~l~~~~~~L~veV~D 208 (518)
.+.+.+++|++|+++| ||||++++.+ ....||+++++| +||.||| |.+... +....|.|+|||
T Consensus 12 ~L~V~VieAk~L~~~d-----dpYv~v~l~~-----~~~~kT~v~~kt~~glnP~WnE~F~f~~~---~~~~~L~v~V~d 78 (483)
T 3bxj_A 12 VLKLWIIEARELPPKK-----RYYCELCLDD-----MLYARTTSKPRSASGDTVFWGEHFEFNNL---PAVRALRLHLYR 78 (483)
T ss_dssp CC-------------------------------------------------------CCEECC-----------------
T ss_pred EEEEEEEEcCCcCCCC-----CCeEEEEECC-----eEEeeeeEEeCCCCCCCCccccEEEEecC---CCccEEEEEEEe
Confidence 3556678999999877 9999998853 235799999999 9999999 655432 124789999999
Q ss_pred -ec---CCCCCcceEEEEEechhhhhccCCCceEEeeccc
Q 010107 209 -FN---SNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 244 (518)
Q Consensus 209 -~d---~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~ 244 (518)
+| ..+++++||.+.+++.++........|++|..++
T Consensus 79 ~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~ 118 (483)
T 3bxj_A 79 DSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPT 118 (483)
T ss_dssp ----------------------------CCEECC------
T ss_pred cCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCC
Confidence 55 3578999999999999997533334577776544
No 82
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.67 E-value=3.5e-08 Score=86.55 Aligned_cols=66 Identities=12% Similarity=0.221 Sum_probs=50.7
Q ss_pred Eeeeeee-CCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEecccccccc--ceeEEE
Q 010107 17 GRTEVVL-NSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRK--NRSLTL 93 (518)
Q Consensus 17 ~rTevi~-~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L~~l~~~~--~~~~~~ 93 (518)
.||.+++ +++||+|+|.|.|.... ....|+|+|||.| . .+||+||++.++|.++.... +...|.
T Consensus 34 ~kt~~~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d-~-----------~~dd~iG~~~i~l~~l~~~~~~~~~~~~ 100 (131)
T 2cjt_A 34 VKSTTIAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG-L-----------IWDTMVGTVWIPLRTIRQSNEEGPGEWL 100 (131)
T ss_dssp EEEECCCEESSSCEEEEEEEEEECC-CSSEEEEEEEECC-S-----------SCEEEEEEEEEEGGGSCBCSSCCCCEEE
T ss_pred EEEeEecCCCCCceECCEEEEEEeC-CCCeEEEEEEECC-C-----------CCCCeEEEEEEEHHHhhhcCCCCccccE
Confidence 3666665 79999999999998763 3447999999999 3 47999999999999987543 222455
Q ss_pred ec
Q 010107 94 DL 95 (518)
Q Consensus 94 ~L 95 (518)
++
T Consensus 101 ~~ 102 (131)
T 2cjt_A 101 TL 102 (131)
T ss_dssp EC
T ss_pred Ec
Confidence 55
No 83
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=98.67 E-value=4.7e-08 Score=107.35 Aligned_cols=82 Identities=17% Similarity=0.300 Sum_probs=66.0
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCC-CCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEe
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNS-LNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCT 79 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~-lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~ 79 (518)
||.|++.+.... ....||+++++| +||+|+|+|.|.+.+++...|+|+|||.|. ++++++||++.++
T Consensus 523 YV~V~l~g~~~d-~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D~D~-----------~~~dd~iG~~~ip 590 (624)
T 1djx_A 523 KVIVEIHGVGRD-TGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDS-----------SSKNDFIGQSTIP 590 (624)
T ss_dssp EEEEEEESSGGG-CEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEECCS-----------SSCCEEEEEEEEE
T ss_pred EEEEEEecCCCC-cceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEEcCC-----------CCCCceeEEEEEE
Confidence 466777552111 146799999998 999999999999887777899999999994 4689999999999
Q ss_pred ccccccccceeEEEeccC
Q 010107 80 LSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 80 L~~l~~~~~~~~~~~L~~ 97 (518)
|.+|... ..|++|.+
T Consensus 591 l~~L~~G---~r~v~L~d 605 (624)
T 1djx_A 591 WNSLKQG---YRHVHLLS 605 (624)
T ss_dssp GGGBCCE---EEEEEEEC
T ss_pred HHHcCCC---cEEEeCCC
Confidence 9999642 34788866
No 84
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=98.66 E-value=1.3e-08 Score=113.04 Aligned_cols=82 Identities=17% Similarity=0.300 Sum_probs=69.0
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEec
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTL 80 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L 80 (518)
||+|++....+ +..||+|+++++||+|+|+|.+.+.....+.|+|+|||.|. ++ +++||++.++|
T Consensus 45 YV~V~l~~~~~---~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D~-----------~~-ddfIG~v~I~L 109 (749)
T 1cjy_A 45 YVELFISTTPD---SRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY-----------VM-DETLGTATFTV 109 (749)
T ss_dssp EEEEECTTSTT---CCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECCS-----------SS-CEEEEEECCBS
T ss_pred EEEEEEecCCC---CeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECCC-----------CC-CceeEEEEEEH
Confidence 46777654222 57899999999999999999999987677899999999994 46 99999999999
Q ss_pred cccccccceeEEEeccC
Q 010107 81 SQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 81 ~~l~~~~~~~~~~~L~~ 97 (518)
.+|........|++|..
T Consensus 110 ~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 110 SSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp TTSCTTCCCCEEEEETT
T ss_pred HHcCCCCceEEEEecCC
Confidence 99987766788999865
No 85
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=98.66 E-value=7.5e-08 Score=84.68 Aligned_cols=92 Identities=10% Similarity=0.103 Sum_probs=72.7
Q ss_pred EEEeeeeee-CCCCCceeeEEEEEEE--eCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEeccccccccceeE
Q 010107 15 EVGRTEVVL-NSLNPTWITKHIITYQ--FEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKNRSL 91 (518)
Q Consensus 15 ev~rTevi~-~~lNP~f~~~f~~~~~--fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L~~l~~~~~~~~ 91 (518)
+-.||++++ +++||+|+|.|+++.. .+....|.|.|||++. +.++.+||++.++|.+++......+
T Consensus 48 ~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~-----------v~~nrlIG~~~i~Lq~lv~~~~l~l 116 (144)
T 3l9b_A 48 QSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK-----------VFSNKLIGTFRMVLQKVVEENRVEV 116 (144)
T ss_dssp EEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT-----------TSCCEEEEEEEEESHHHHHHSEEEE
T ss_pred cceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc-----------ccCCCEEEEEEEEhHHhccCCeEEE
Confidence 568999998 6999999999999864 3445699999999995 4689999999999999998876667
Q ss_pred EEeccCCcccccccccCCCCCCCCcccceeeeeceeeecC
Q 010107 92 TLDLVRREETITPITEESNPSNRPKHCGKLTVHAEECINS 131 (518)
Q Consensus 92 ~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~~~~ 131 (518)
+.+|.+. +. + ...++|.+.+.|.+..
T Consensus 117 ~~~LvD~-----------n~--~-~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 117 SDTLIDD-----------NN--A-IIKTSLSMEVRYQAAD 142 (144)
T ss_dssp EEEEECT-----------TS--C-EEEEEEEEEEEEEETT
T ss_pred eecccCC-----------CC--C-ccccEEEEEEEecCCC
Confidence 7777551 11 1 2347888888887654
No 86
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.61 E-value=9.5e-08 Score=107.84 Aligned_cols=98 Identities=9% Similarity=0.079 Sum_probs=71.4
Q ss_pred eEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeeccccCC-CCCceee--eEEe-eeccCCCCccEEEEEEee
Q 010107 134 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTEVLKNE-TKPTWKS--VFLN-IQQVGSKDSPLIIECFNF 209 (518)
Q Consensus 134 li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTevik~t-lnP~W~e--f~~~-~~~l~~~~~~L~veV~D~ 209 (518)
+.+.+++|++|+.+ ++||||++.+.+........+||++++++ +||+||+ |.|. +.. .....|+|+|||+
T Consensus 727 L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~--pela~Lrf~V~D~ 800 (885)
T 3ohm_B 727 LRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVL--PTLASLRIAAFEE 800 (885)
T ss_dssp EEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESC--GGGCEEEEEEEET
T ss_pred EEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEc--CCcCEEEEEEEcC
Confidence 45567899999863 68999999987521112235899999875 9999997 6655 321 1235799999998
Q ss_pred cCCCCCcceEEEEEechhhhhccCCCceEEeeccc
Q 010107 210 NSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 244 (518)
Q Consensus 210 d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~ 244 (518)
| +++||++.++|..|.. | -+..+|.+.+
T Consensus 801 d----ddfiG~~~lpL~~L~~--G-yR~vpL~~~~ 828 (885)
T 3ohm_B 801 G----GKFVGHRILPVSAIRS--G-YHYVCLRNEA 828 (885)
T ss_dssp T----TEEEEEEEEETTTCCC--E-EEEEEEECTT
T ss_pred C----ccEEeeEEEEHHHcCC--C-ceEEEecCCC
Confidence 7 7999999999999964 2 3456676643
No 87
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=98.56 E-value=7.8e-08 Score=87.99 Aligned_cols=57 Identities=11% Similarity=0.228 Sum_probs=47.5
Q ss_pred Eeeeeee-CCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEeccccccc
Q 010107 17 GRTEVVL-NSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTR 86 (518)
Q Consensus 17 ~rTevi~-~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L~~l~~~ 86 (518)
.||.+++ +++||+|+|.|.|.... ....|+|+|||.| . .+||+||++.++|.++...
T Consensus 43 ~kt~~~~~~t~nP~WnE~f~f~v~~-~~~~L~~~V~D~d-~-----------~~dd~iG~~~i~L~~l~~~ 100 (167)
T 2cjs_A 43 VESTTIAVRGSQPSWEQDFMFEINR-LDLGLTVEVWNKG-L-----------IWDTMVGTVWIPLRTIRQS 100 (167)
T ss_dssp EEEECCCEESSSCEEEEEEEEECCC-TTSEEEEEEEECC-S-----------SCCEEEEEEEEEGGGSCBC
T ss_pred eEEEEecCCCCCCCCCCEEEEEeeC-CCCEEEEEEEECC-C-----------CCCceEEEEEEEHHHhccc
Confidence 4677776 69999999999998763 3457999999999 3 4799999999999998754
No 88
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.53 E-value=2e-07 Score=105.00 Aligned_cols=97 Identities=11% Similarity=0.148 Sum_probs=70.6
Q ss_pred eEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceeeEeeec-cccC-CCCCceee--eEE-eeeccCCCCccEEEEEEe
Q 010107 134 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIPVCKTE-VLKN-ETKPTWKS--VFL-NIQQVGSKDSPLIIECFN 208 (518)
Q Consensus 134 li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~~~kTe-vik~-tlnP~W~e--f~~-~~~~l~~~~~~L~veV~D 208 (518)
+.+.+++|++|+. +++||||++.+.+........+||+ ++++ ++||+||+ |.| .+.. +....|+|+|||
T Consensus 680 L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~--~el~~Lr~~V~D 753 (799)
T 2zkm_X 680 LSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILM--PELASLRVAVME 753 (799)
T ss_dssp EEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESS--GGGCEEEEEEEE
T ss_pred EEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEcc--CCccEEEEEEEE
Confidence 5556789999985 4799999999975211122358999 8875 59999998 665 4422 123479999999
Q ss_pred ecCCCCCcceEEEEEechhhhhccCCCceEEeecc
Q 010107 209 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLS 243 (518)
Q Consensus 209 ~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~ 243 (518)
+| +++||++.+++.+|.. | -+.++|.+.
T Consensus 754 ~d----~d~iG~~~ipl~~L~~--G-~r~v~L~~~ 781 (799)
T 2zkm_X 754 EG----NKFLGHRIIPINALNS--G-YHHLCLHSE 781 (799)
T ss_dssp TT----TEEEEEEEEEGGGBCC--E-EEEEEEECT
T ss_pred eC----CCccceEeeehhhcCC--C-cEEEeccCC
Confidence 86 7899999999999954 2 345666654
No 89
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.46 E-value=5.5e-07 Score=101.06 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=71.3
Q ss_pred eEEEEEeecCCCcCCCCCCCCcEEEEEEEecCC-ceeeEeeeccccCC-CCCceee--eEEe-eeccCCCCccEEEEEEe
Q 010107 134 TTELILRCSDLDCKDLFSRNDPFLVISKIVESG-THIPVCKTEVLKNE-TKPTWKS--VFLN-IQQVGSKDSPLIIECFN 208 (518)
Q Consensus 134 li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~-~~~~~~kTevik~t-lnP~W~e--f~~~-~~~l~~~~~~L~veV~D 208 (518)
+.+.+++|++|+.+ ++||||++.+.+... .....+||++++++ +||+||+ |.|. +.. +.-..|+|+|||
T Consensus 652 L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~--pela~Lrf~V~D 725 (816)
T 3qr0_A 652 IEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVL--PDLAVVRIIVSE 725 (816)
T ss_dssp EEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESC--GGGCEEEEEEEE
T ss_pred EEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccC--CCccEEEEEEEe
Confidence 45557899999863 689999999875211 12257899999874 9999997 5554 321 123579999999
Q ss_pred ecCCCCCcceEEEEEechhhhhccCCCceEEeeccc
Q 010107 209 FNSNGKHDLIGKVQKSLADLEKLHSSGQGQNLFLST 244 (518)
Q Consensus 209 ~d~~~~~d~IG~~~i~l~~L~~~~~~~~~~~l~n~~ 244 (518)
++ +++||++.++|..|.. | -+..+|.+.+
T Consensus 726 ~d----ddfiG~~~ipL~~L~~--G-yR~vpL~~~~ 754 (816)
T 3qr0_A 726 EN----GKFIGHRVMPLDGIKP--G-YRHVPLRNES 754 (816)
T ss_dssp TT----SCEEEEEEEESTTCCC--E-EEEEEEECTT
T ss_pred cC----CCeeeEEEEEHHHcCC--c-ceEEEEeCCC
Confidence 85 7899999999999964 2 3456676643
No 90
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=98.40 E-value=3.7e-08 Score=105.18 Aligned_cols=83 Identities=14% Similarity=0.148 Sum_probs=10.5
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCC---CCCceeeEEEEEEEeCceeEEEEEEEE-ecCCcccccccccCccCcceeEEE
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNS---LNPTWITKHIITYQFEVVQTLVFRIYD-VDTQFHNVDVKTLKLVEQQFLGEA 76 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~---lNP~f~~~f~~~~~fe~~q~L~~~VyD-~D~~~~~~~~~~~~l~~~d~iG~~ 76 (518)
||.|++.. ...+||+++++| +||+|+|.|.+... ...+.|.|+||| +|... ..++++|||++
T Consensus 30 Yv~v~l~~-----~~~~kT~v~~kt~~glnP~WnE~F~f~~~-~~~~~L~v~V~d~~d~~~--------~~~~d~~lG~v 95 (483)
T 3bxj_A 30 YCELCLDD-----MLYARTTSKPRSASGDTVFWGEHFEFNNL-PAVRALRLHLYRDSDKKR--------KKDKAGYVGLV 95 (483)
T ss_dssp ----------------------------------CCEECC----------------------------------------
T ss_pred eEEEEECC-----eEEeeeeEEeCCCCCCCCccccEEEEecC-CCccEEEEEEEecCCccc--------cCCCCceEEEE
Confidence 56777743 136799999999 99999999998754 235799999999 45210 24689999999
Q ss_pred EEeccccccccceeEEEeccC
Q 010107 77 TCTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 77 ~~~L~~l~~~~~~~~~~~L~~ 97 (518)
.++|.++........|++|..
T Consensus 96 ~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 96 TVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp -----------CCEECC----
T ss_pred EEEHHHhcCCCCCCeEEECCC
Confidence 999999987667788999954
No 91
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=98.31 E-value=4.4e-06 Score=81.96 Aligned_cols=155 Identities=12% Similarity=0.182 Sum_probs=107.3
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHH-HHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEecC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAY-QRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLN 355 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y-~~ai~~i~~i~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~ 355 (518)
.+.+++.||-|+| |. ...+ +++...+..++..++ ++-++-++.|+.. +...|+|+
T Consensus 18 ~~DivfvlD~SgS------------M~----~~~~~~~~k~~~~~lv~~l~~~~~~~rvglv~Fs~~-----~~~~~~l~ 76 (266)
T 4hqo_A 18 QVDLYLLVDGSGS------------IG----YPNWITKVIPMLNGLINSLSLSRDTINLYMNLFGSY-----TTELIRLG 76 (266)
T ss_dssp CEEEEEEEECSTT------------TC----HHHHHHTHHHHHHHHHHTCCBCTTSEEEEEEEESSS-----EEEEECTT
T ss_pred ceeEEEEEECCCC------------cC----hhHHHHHHHHHHHHHHHHcccCCCCcEEEEEEecCC-----cceEEecC
Confidence 4899999999997 54 2345 466667777777776 5567888999876 33346654
Q ss_pred CCCCCCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCHHHHHHHHHHcc
Q 010107 356 GSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKAS 435 (518)
Q Consensus 356 ~~~~~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as 435 (518)
.. .-...+.+.++-.+.-......|.|+....|+.|.+...... ......-++++||||..+|..++.+++..+.
T Consensus 77 ~~----~~~~~~~~~~~i~~l~~~~~~~G~T~~~~AL~~a~~~l~~~~-~r~~~~~~iIllTDG~~~d~~~~~~~a~~l~ 151 (266)
T 4hqo_A 77 SG----QSIDKRQALSKVTELRKTYTPYGTTSMTAALDEVQKHLNDRV-NREKAIQLVILMTDGVPNSKYRALEVANKLK 151 (266)
T ss_dssp SH----HHHCHHHHHHHHHHHHHHCCCCSCCCHHHHHHHHHHHHHTTC-SCTTSEEEEEEEECSCCSCHHHHHHHHHHHH
T ss_pred CC----CccCHHHHHHHHHHhhhccCCCCCCCHHHHHHHHHHHHhhcc-ccCCCCeEEEEEccCCCCCchHHHHHHHHHH
Confidence 21 111234444444333222356899999999999976554321 1234578999999999999888888888888
Q ss_pred CCCeEEEEEecCCC-cchhhhhcccC
Q 010107 436 DLPLSILIIGVGGA-DFKEMEILDAD 460 (518)
Q Consensus 436 ~lPlsiiiVGvG~~-~f~~m~~ld~d 460 (518)
...+.|..||||++ +-..|+.+-+.
T Consensus 152 ~~gi~i~~iGiG~~~~~~~L~~iA~~ 177 (266)
T 4hqo_A 152 QRNVRLAVIGIGQGINHQFNRLIAGC 177 (266)
T ss_dssp HTTCEEEEEECSSSCCHHHHHHHHTC
T ss_pred HCCCEEEEEecCcccCHHHHHHhhCC
Confidence 88999999999986 45555777643
No 92
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=98.29 E-value=1.4e-05 Score=78.87 Aligned_cols=155 Identities=17% Similarity=0.208 Sum_probs=108.2
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHH-HHHHHHHhhhcccccC---CCCcceeeecccCCCCCceeEEecC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAY-QRAILEVGEVLQVYDS---DKRFPAWGFGARPIDGPVSHCFNLN 355 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y-~~ai~~i~~i~~~yd~---d~~~~~~gFG~~~~~~~~~~~f~l~ 355 (518)
.+.+++.||-|+| |.. ..+ +.+...+..++..+.. +-++-++.|+.. +...|+|+
T Consensus 21 ~~div~vlD~SgS------------M~~----~~~~~~~k~~~~~~v~~l~~~~~~~rvglv~Fs~~-----~~~~~~l~ 79 (281)
T 4hqf_A 21 EVDLYLLMDGSGS------------IRR----HNWVNHAVPLAMKLIQQLNLNDNAIHLYASVFSNN-----AREIIRLH 79 (281)
T ss_dssp CEEEEEEEECCCC------------SST----HHHHHHHHHHHHHHHTTCCCCTTSEEEEEEEEETT-----EEEEEEEC
T ss_pred ceeEEEEEeCCCC------------cCH----HHHHHHHHHHHHHHHHHhccCCCCcEEEEEEcCCC-----ceEEEEcc
Confidence 5899999999997 542 234 5666666666666664 556889999875 33346765
Q ss_pred CCCCCCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCHHHHHHHHHHcc
Q 010107 356 GSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKAS 435 (518)
Q Consensus 356 ~~~~~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as 435 (518)
.... ...+.+.++-.+.-......|.|+....|+.|.+...... .....--++++||||..+|..++.+++..+.
T Consensus 80 ~~~~----~~~~~l~~~i~~l~~~~~~~G~T~~~~aL~~a~~~l~~~~-~r~~~~~~iillTDG~~~d~~~~~~~~~~l~ 154 (281)
T 4hqf_A 80 SDAS----KNKEKALIIIKSLLSTNLPYGKTSLTDALLQVRKHLNDRI-NRENANQLVVILTDGIPDSIQDSLKESRKLS 154 (281)
T ss_dssp SSCS----SCHHHHHHHHHHHHHTTGGGCSCCHHHHHHHHHHHHHTSC-CCTTCEEEEEEEESSCCSCHHHHHHHHHHHH
T ss_pred ccCc----cCHHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHhcc-CCCCCCEEEEEEecCCCCCcHHHHHHHHHHH
Confidence 4211 1234454444333323456899999999999976655321 1224578899999999998878888888887
Q ss_pred CCCeEEEEEecCCC-cchhhhhcccC
Q 010107 436 DLPLSILIIGVGGA-DFKEMEILDAD 460 (518)
Q Consensus 436 ~lPlsiiiVGvG~~-~f~~m~~ld~d 460 (518)
...+.|+.||||++ +-..|+.+-+.
T Consensus 155 ~~gv~i~~igiG~~~~~~~L~~iA~~ 180 (281)
T 4hqf_A 155 DRGVKIAVFGIGQGINVAFNRFLVGC 180 (281)
T ss_dssp HTTCEEEEEEESSSCCHHHHHHHTTS
T ss_pred HCCCEEEEEeCCCccCHHHHHhhhCC
Confidence 88899999999995 77777777643
No 93
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=98.28 E-value=1e-05 Score=74.11 Aligned_cols=150 Identities=14% Similarity=0.111 Sum_probs=96.3
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEecCCCCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 359 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 359 (518)
.+++++.||-|+| |... .....+++..+..-+ ..++-++-++.|+.. +...|+++.
T Consensus 7 ~~div~vlD~SgS------------M~~~--~~~~~~~~~~~~~~~--~~~~~~v~lv~f~~~-----~~~~~~l~~--- 62 (185)
T 3n2n_F 7 GFDLYFILDKSGS------------VLHH--WNEIYYFVEQLAHKF--ISPQLRMSFIVFSTR-----GTTLMKLTE--- 62 (185)
T ss_dssp EEEEEEEEECSGG------------GGGG--HHHHHHHHHHHHHHC--CCTTEEEEEEEESSS-----EEEEEEEEC---
T ss_pred CeeEEEEEeCCCC------------hhhh--HHHHHHHHHHHHHHh--CCCCcEEEEEEEecC-----ceEEeccCC---
Confidence 4789999999997 5421 122223333333333 234557889999875 333566652
Q ss_pred CCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCHH--HHHHHHHHccCC
Q 010107 360 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQ--ETKDALVKASDL 437 (518)
Q Consensus 360 ~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~--~t~~~i~~as~l 437 (518)
..+.+.++-. .++.....|.|++...|+.+.+..............++++||||..+|-. +..++...+...
T Consensus 63 -----~~~~~~~~i~-~l~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~~~~~~~ 136 (185)
T 3n2n_F 63 -----DREQIRQGLE-ELQKVLPGGDTYMHEGFERASEQIYYENRQGYRTASVIIALTDGELHEDLFFYSEREANRSRDL 136 (185)
T ss_dssp -----CHHHHHHHHH-HHHTCCCCSCCCHHHHHHHHHHHHHHHHTTCBCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHT
T ss_pred -----CHHHHHHHHH-HHhhhcCCCCccHHHHHHHHHHHHhhccccCCCCCcEEEEEcCCCCCCCcccchHHHHHHHHHC
Confidence 2333433332 23333468999999999999885532211122357789999999987654 345666667778
Q ss_pred CeEEEEEecCCCcchhhhhccc
Q 010107 438 PLSILIIGVGGADFKEMEILDA 459 (518)
Q Consensus 438 PlsiiiVGvG~~~f~~m~~ld~ 459 (518)
.+.|..||||+.+-..|+.+-+
T Consensus 137 gi~i~~igvg~~~~~~L~~iA~ 158 (185)
T 3n2n_F 137 GAIVYAVGVKDFNETQLARIAD 158 (185)
T ss_dssp TEEEEEEECSSCCHHHHTTTSS
T ss_pred CCEEEEEEeccCCHHHHHHHhC
Confidence 9999999999888888877773
No 94
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=98.24 E-value=9.1e-06 Score=74.21 Aligned_cols=149 Identities=15% Similarity=0.155 Sum_probs=96.3
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEecCCCCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 359 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 359 (518)
.+++++.+|.|+| |... .....+.|-..+...+. ++-++-++.|+.. ....++++.
T Consensus 6 ~~dvv~vlD~SgS------------M~~~-~~~~~~~~~~~~~~~~~---~~~~v~lv~f~~~-----~~~~~~~~~--- 61 (182)
T 1shu_X 6 AFDLYFVLDKSGS------------VANN-WIEIYNFVQQLAERFVS---PEMRLSFIVFSSQ-----ATIILPLTG--- 61 (182)
T ss_dssp CEEEEEEEECSGG------------GGGG-HHHHHHHHHHHHHHCCC---TTEEEEEEEESSS-----EEEEEEEEC---
T ss_pred ceeEEEEEECCCC------------cccC-HHHHHHHHHHHHHHhcC---CCceEEEEEeCCC-----ceEEECCCC---
Confidence 3789999999997 4421 11122233333333333 4566889999875 223455542
Q ss_pred CCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCHH--HHHHHHHHccCC
Q 010107 360 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQ--ETKDALVKASDL 437 (518)
Q Consensus 360 ~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~--~t~~~i~~as~l 437 (518)
+.+.+.++ -+.+..+...|.|++...|+.+.+...... ......++++||||..++-. ...+++..+...
T Consensus 62 -----~~~~~~~~-l~~l~~~~~~g~T~~~~al~~a~~~l~~~~--~~~~~~~iiliTDG~~~~~~~~~~~~~~~~~~~~ 133 (182)
T 1shu_X 62 -----DRGKISKG-LEDLKRVSPVGETYIHEGLKLANEQIQKAG--GLKTSSIIIALTDGKLDGLVPSYAEKEAKISRSL 133 (182)
T ss_dssp -----CHHHHHHH-HHHHHTCCCCSCCCHHHHHHHHHHHHHHHT--GGGSCEEEEEEECCCCCTTHHHHHHHHHHHHHHT
T ss_pred -----CHHHHHHH-HHhcccCCCCCCchHHHHHHHHHHHHHhcc--CCCCCeEEEEECCCCcCCCCchhHHHHHHHHHhC
Confidence 12222222 223334557899999999999988776542 22456789999999976643 335566666778
Q ss_pred CeEEEEEecCCCcchhhhhcccC
Q 010107 438 PLSILIIGVGGADFKEMEILDAD 460 (518)
Q Consensus 438 PlsiiiVGvG~~~f~~m~~ld~d 460 (518)
.+.|..||||+.+-..|+.+-+.
T Consensus 134 ~i~i~~igvg~~~~~~L~~ia~~ 156 (182)
T 1shu_X 134 GASVYCVGVLDFEQAQLERIADS 156 (182)
T ss_dssp TCEEEEEECSSCCHHHHHHHSSS
T ss_pred CCEEEEEeCCcCCHHHHHHHhCC
Confidence 89999999999888888888743
No 95
>2xgg_A Microneme protein 2; A/I domain, cell adhesion, hydrolase; 2.05A {Toxoplasma gondii}
Probab=98.16 E-value=1.3e-05 Score=73.43 Aligned_cols=141 Identities=13% Similarity=0.080 Sum_probs=93.9
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccC---CCCcceeeecccCCCCCceeEEecCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDS---DKRFPAWGFGARPIDGPVSHCFNLNG 356 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~---d~~~~~~gFG~~~~~~~~~~~f~l~~ 356 (518)
.+.+++.||-|+| |. ...++.+...+..++..++. .-++-++.|+.. +...|+|+.
T Consensus 17 ~~divfvlD~SgS------------m~----~~~~~~~k~~~~~~i~~l~~~~~~~rv~vv~F~~~-----~~~~~~l~~ 75 (178)
T 2xgg_A 17 QLDICFLIDSSGS------------IG----IQNFRLVKQFLHTFLMVLPIGPEEVNNAVVTYSTD-----VHLQWDLQS 75 (178)
T ss_dssp CEEEEEEEECCTT------------TC----HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSS-----EEEEECTTS
T ss_pred CeeEEEEEECCCC------------CC----HHHHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCc-----eEEEEeCCC
Confidence 4899999999997 54 24577777777777877763 257889999876 223466642
Q ss_pred CCCCCcccChHHHHHHHHhhhccce-ecCCCChHHHHHHHHHHHHhh-hcccCCceEEEEEEeCCCcCCHHHHHHHHHHc
Q 010107 357 SNSYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIAGQS-LANHGQKYFVLLIITDGVVTDLQETKDALVKA 434 (518)
Q Consensus 357 ~~~~~~~~g~~~i~~~Y~~~~~~~~-~~gpt~f~pvi~~~~~~a~~~-~~~~~~~y~vlliltdG~i~d~~~t~~~i~~a 434 (518)
. .....+.+.++- ..+. ..|.|+....|+.|.+..... .........++++||||..+|-.+..+++..+
T Consensus 76 ~----~~~~~~~~~~~i----~~l~~~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~~~~~~~~~~~~l 147 (178)
T 2xgg_A 76 P----NAVDKQLAAHAV----LDMPYKKGSTNTSDGLKACKQILFTGSRPGREHVPKLVIGMTDGESDSDFRTVRAAKEI 147 (178)
T ss_dssp G----GGSCHHHHHHHH----HHCCCCCCCCCHHHHHHHHHHHHHHCCCTTCTTSCEEEEEEESSCCCHHHHHSHHHHHH
T ss_pred C----CccCHHHHHHHH----HhCCCCCCCccHHHHHHHHHHHhcCcccCCCCCCCEEEEEEcCCCCCCCccHHHHHHHH
Confidence 1 111334444433 3333 568999999999998864321 11122456789999999988765566666666
Q ss_pred cCCCeEEEEEecCCC
Q 010107 435 SDLPLSILIIGVGGA 449 (518)
Q Consensus 435 s~lPlsiiiVGvG~~ 449 (518)
....+.|..||||+.
T Consensus 148 ~~~gi~v~~igvG~~ 162 (178)
T 2xgg_A 148 RELGGIVTVLAVGHY 162 (178)
T ss_dssp HHTTCEEEEEECC--
T ss_pred HHCCCEEEEEEcCCc
Confidence 667899999999975
No 96
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=98.14 E-value=9.6e-06 Score=75.18 Aligned_cols=150 Identities=22% Similarity=0.267 Sum_probs=96.9
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc-cCCCCcceeeecccCCCCCceeEEecCCCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY-DSDKRFPAWGFGARPIDGPVSHCFNLNGSN 358 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~y-d~d~~~~~~gFG~~~~~~~~~~~f~l~~~~ 358 (518)
.+.+++.+|-|+| |.. ..++.+...+-.++..+ ..+-++-++.|+.. +...|+++..
T Consensus 9 ~~div~vlD~SgS------------M~~----~~~~~~~~~~~~~~~~l~~~~~~v~lv~f~~~-----~~~~~~~~~~- 66 (198)
T 1n3y_A 9 EQDIVFLIDGSGS------------ISS----RNFATMMNFVRAVISQFQRPSTQFSLMQFSNK-----FQTHFTFEEF- 66 (198)
T ss_dssp CEEEEEEEECCTT------------SCH----HHHHHHHHHHHHHHTTSCTTTEEEEEEEESSS-----EEEEECHHHH-
T ss_pred CeeEEEEEECCCC------------CCH----HHHHHHHHHHHHHHHhcCCCCcEEEEEEeCCC-----ccEEEecCcc-
Confidence 3889999999997 442 24667777777777777 46677999999886 2223444210
Q ss_pred CCCcccChHHHHHHHHhhhccce-ecCCCChHHHHHHHHHHH-HhhhcccCCceEEEEEEeCCCcC-CHHHHHHHHHHcc
Q 010107 359 SYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIA-GQSLANHGQKYFVLLIITDGVVT-DLQETKDALVKAS 435 (518)
Q Consensus 359 ~~~~~~g~~~i~~~Y~~~~~~~~-~~gpt~f~pvi~~~~~~a-~~~~~~~~~~y~vlliltdG~i~-d~~~t~~~i~~as 435 (518)
... +...+.+..+. ..|.|++...|+.+.+.. ............++++||||..+ |.....+++..+.
T Consensus 67 -----~~~----~~~~~~i~~l~~~~g~T~~~~al~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~~~~ 137 (198)
T 1n3y_A 67 -----RRS----SNPLSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMAD 137 (198)
T ss_dssp -----HHC----SSGGGGGTTCCCCCSCBCHHHHHHHHHTTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCHHHHHHHHH
T ss_pred -----CCH----HHHHHHHhcCcCCCCCchHHHHHHHHHHHHhCcccCCCCCCceEEEEECCCCCCCCcccHHHHHHHHH
Confidence 000 11123344443 578999999999887432 22111123457789999999887 5444445555556
Q ss_pred CCCeEEEEEecCCCc-----chhhhhcccC
Q 010107 436 DLPLSILIIGVGGAD-----FKEMEILDAD 460 (518)
Q Consensus 436 ~lPlsiiiVGvG~~~-----f~~m~~ld~d 460 (518)
...+.|..||||... ...|+.+-+.
T Consensus 138 ~~gi~i~~igvG~~~~~~~~~~~L~~iA~~ 167 (198)
T 1n3y_A 138 AAGIIRYAIGVGLAFQNRNSWKELNDIASK 167 (198)
T ss_dssp HTTCEEEEEEESGGGGSSTTHHHHHHHSCS
T ss_pred HCCCEEEEEEccccccccccHHHHHHHHcC
Confidence 778899999999864 5777777643
No 97
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=98.12 E-value=1.2e-06 Score=97.46 Aligned_cols=84 Identities=18% Similarity=0.255 Sum_probs=65.5
Q ss_pred CEEEEEEcCCCcEEEEEeeeeeeCCCCCceeeEEEEEEEeC-ceeEEEEEEEEecCCcccccccccCccCcceeEEEEEe
Q 010107 1 MLVVYMKARDGALVEVGRTEVVLNSLNPTWITKHIITYQFE-VVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCT 79 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rTevi~~~lNP~f~~~f~~~~~fe-~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~ 79 (518)
||.|++.. ++++....||+++++|+||+|+++|.+.+... ..+.|.|+|||+|. ++++|+||++.++
T Consensus 196 yvkv~l~p-~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d~-----------~~~dd~iG~~~i~ 263 (674)
T 3pfq_A 196 YVKLKLIP-DPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL-----------TSRNDFMGSLSFG 263 (674)
T ss_dssp EEEEEEES-CSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECCS-----------SSCCEECCBCCCB
T ss_pred cccccccc-CccccccccccccccccCCCccceeeeecccCCccceeeeEEeeccc-----------ccccccccccccc
Confidence 35555543 33344578999999999999999998887543 33479999999995 4689999999999
Q ss_pred ccccccccceeEEEeccC
Q 010107 80 LSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 80 L~~l~~~~~~~~~~~L~~ 97 (518)
|.++.... ..-|.+|..
T Consensus 264 l~~l~~~~-~~~w~~Lls 280 (674)
T 3pfq_A 264 ISELQKAG-VDGWFKLLS 280 (674)
T ss_dssp TTHHHHCC-EEEEEECBC
T ss_pred hhhhccCC-cccceeecc
Confidence 99998654 577888755
No 98
>1q0p_A Complement factor B; VON willebrand factor, MAC-1, I domain, A domain, hydrolase; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=98.11 E-value=1.4e-05 Score=75.31 Aligned_cols=158 Identities=13% Similarity=0.173 Sum_probs=99.9
Q ss_pred CceeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhh---cccccCCCCcceeeecccCCCCCceeEEec
Q 010107 278 GFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEV---LQVYDSDKRFPAWGFGARPIDGPVSHCFNL 354 (518)
Q Consensus 278 g~~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i---~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l 354 (518)
...+.+++.||.|+| |.. ..++.+...+..+ +..++.+-++-++.|+.. +...+++
T Consensus 13 ~~~~div~vlD~SgS------------M~~----~~~~~~k~~~~~~i~~l~~~~~~~~v~lv~f~~~-----~~~~~~~ 71 (223)
T 1q0p_A 13 SGSMNIYLVLDGSDS------------IGA----SNFTGAKKSLVNLIEKVASYGVKPRYGLVTYATY-----PKIWVKV 71 (223)
T ss_dssp --CEEEEEEEECSTT------------TCH----HHHHHHHHHHHHHHHHHHTTTCCCEEEEEEESSS-----EEEEECT
T ss_pred CCceeEEEEEeCCCC------------Cch----HHHHHHHHHHHHHHHHHhcCCCCceEEEEEecCc-----cceeecc
Confidence 345899999999997 542 2355555554444 455555667999999876 2223444
Q ss_pred CCCCCCCcccChHHHHHHHHhhhccc--eecCCCChHHHHHHHHHHHHhhhccc----CCceEEEEEEeCCCcC---CHH
Q 010107 355 NGSNSYCEVEGIPGIMMAYTSALHNV--NLAGPTLFGPVISNAALIAGQSLANH----GQKYFVLLIITDGVVT---DLQ 425 (518)
Q Consensus 355 ~~~~~~~~~~g~~~i~~~Y~~~~~~~--~~~gpt~f~pvi~~~~~~a~~~~~~~----~~~y~vlliltdG~i~---d~~ 425 (518)
+ .|.-...+.+.++-.+ ++.. ...|.|++...|+.+.+......... ...-.++++||||..+ |..
T Consensus 72 ~----~~~~~~~~~~~~~i~~-l~~~~~~~~g~T~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~ 146 (223)
T 1q0p_A 72 S----EADSSNADWVTKQLNE-INYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPI 146 (223)
T ss_dssp T----SGGGGCHHHHHHHHHT-CCTTSCSCTTCCCHHHHHHHHHHHHCCTTSSCCTTGGGCEEEEEEEECSCCCSSSCTH
T ss_pred c----cCCCCCHHHHHHHHHh-cccccccCCCCccHHHHHHHHHHHhhccccccccccccCCeEEEEECCCCCCCCCChH
Confidence 2 2333333444443322 2221 24689999999999988765321101 2456789999999887 666
Q ss_pred HHHHHHHHc----------cCCCeEEEEEecCC-CcchhhhhcccCC
Q 010107 426 ETKDALVKA----------SDLPLSILIIGVGG-ADFKEMEILDADK 461 (518)
Q Consensus 426 ~t~~~i~~a----------s~lPlsiiiVGvG~-~~f~~m~~ld~d~ 461 (518)
...+.+.+. ....+-|..||||. .+...|+.+-+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~i~i~~igvG~~~~~~~L~~iA~~~ 193 (223)
T 1q0p_A 147 TVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASKK 193 (223)
T ss_dssp HHHHHHHHHTTCSCBTTBCCGGGEEEEEEECSSCCCHHHHHHHSCCC
T ss_pred HHHHHHHHHHhhhhhhhhcccCCcEEEEEEecCcCCHHHHHHHhcCC
Confidence 666666543 34678999999996 4777888887443
No 99
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.09 E-value=1.5e-05 Score=68.16 Aligned_cols=89 Identities=18% Similarity=0.187 Sum_probs=68.7
Q ss_pred CEEEEEEcCCCcEEEEEee-eeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEe
Q 010107 1 MLVVYMKARDGALVEVGRT-EVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCT 79 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rT-evi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~ 79 (518)
||.|.+++.- -.+.||| -+.++|..|+|++.|...++ ....|.+.|++.. -+|++.|.+.
T Consensus 30 y~aV~vdE~~--~~e~g~t~~~K~kT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh~a---------------~~fvAn~tV~ 90 (126)
T 1yrk_A 30 FCAVKMKEAL--STERGKTLVQKKPTMYPEWKSTFDAHIY--EGRVIQIVLMRAA---------------EEPVSEVTVG 90 (126)
T ss_dssp EEEEEEEEEE--EETTEEEEECCSCCBCCCTTCEEEEECC--TTCEEEEEEEEET---------------TEEEEEEEEE
T ss_pred eEEEEeeeeE--EcccceeecccCCCCCcCccceEEeeee--CCEEEEEEEEcCC---------------CCeeeEEEEE
Confidence 5888887621 1135688 78899999999999876654 5668999999544 3999999999
Q ss_pred ccccccc-----cceeEEEeccCCcccccccccCCCCCCCCcccceeeeeceee
Q 010107 80 LSQIVTR-----KNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 128 (518)
Q Consensus 80 L~~l~~~-----~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~ 128 (518)
+.+|... ....+|++|++ .|+|++.+++.
T Consensus 91 ~edL~~~c~~~~g~~e~WvdLeP--------------------~Gkl~~~i~~~ 124 (126)
T 1yrk_A 91 VSVLAERCKKNNGKAEFWLDLQP--------------------QAKVLMSVQYF 124 (126)
T ss_dssp HHHHHHHHHTTTTEEEEEEECBS--------------------SCEEEEEEEEE
T ss_pred HHHHHhhhccCCCceEEEEeccc--------------------CcEEEEEEEEe
Confidence 9999833 34588999966 69999888765
No 100
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.08 E-value=1e-05 Score=70.10 Aligned_cols=89 Identities=16% Similarity=0.209 Sum_probs=68.5
Q ss_pred CEEEEEEcCCCcEEEEEee-eeeeCCCCCceeeEEEEEEEeCceeEEEEEEEEecCCcccccccccCccCcceeEEEEEe
Q 010107 1 MLVVYMKARDGALVEVGRT-EVVLNSLNPTWITKHIITYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCT 79 (518)
Q Consensus 1 ~~vv~~~~~~~~~~ev~rT-evi~~~lNP~f~~~f~~~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~ 79 (518)
||.|.+++. .-.+.||| -+.++|..|+|++.|...++ +...|.+.|++.. -+|+..|.+.
T Consensus 35 Y~aV~VdE~--~~te~gqtl~~KkkT~~P~Wne~Fd~~V~--~Gr~l~i~Vfh~a---------------~~fVAn~tV~ 95 (138)
T 2enj_A 35 YCAVLVKEY--VESENGQMYIQKKPTMYPPWDSTFDAHIN--KGRVMQIIVKGKN---------------VDLISETTVE 95 (138)
T ss_dssp EEEEEEEEE--EEETTEEEEEEEEEEECCCSSSEEEECCC--SSCEEEEEEECSS---------------CSCCEEEEEE
T ss_pred eEEEEeeee--eeccCceeecccCCCCCccccceEeeeEE--CCeEEEEEEEcCC---------------CCeeeEEEEE
Confidence 578888761 11134999 88999999999999876654 5668999999433 3999999999
Q ss_pred ccccccc-----cceeEEEeccCCcccccccccCCCCCCCCcccceeeeeceee
Q 010107 80 LSQIVTR-----KNRSLTLDLVRREETITPITEESNPSNRPKHCGKLTVHAEEC 128 (518)
Q Consensus 80 L~~l~~~-----~~~~~~~~L~~~~~~i~~~~~~~~~~~~~~~~G~I~i~~e~~ 128 (518)
+.+|... ....+|++|++ .|+|++.+++.
T Consensus 96 ~edL~~~ck~~~g~~e~WvdLeP--------------------~Gkl~v~i~~~ 129 (138)
T 2enj_A 96 LYSLAERCRKNNGKTEIWLELKP--------------------QGRMLMNARYF 129 (138)
T ss_dssp SHHHHHHHHHTTTCEEEEEECBS--------------------SCEEEEEEEEC
T ss_pred HHHHHhhhccCCCceEEEEeccc--------------------CcEEEEEEEEE
Confidence 9999833 34589999966 68999888774
No 101
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.07 E-value=3.9e-06 Score=94.79 Aligned_cols=78 Identities=17% Similarity=0.191 Sum_probs=58.4
Q ss_pred CEEEEEEc-CCCcEEEEEeeeeeeCC-CCCceee-EEEEE-EEeCceeEEEEEEEEecCCcccccccccCccCcceeEEE
Q 010107 1 MLVVYMKA-RDGALVEVGRTEVVLNS-LNPTWIT-KHIIT-YQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEA 76 (518)
Q Consensus 1 ~~vv~~~~-~~~~~~ev~rTevi~~~-lNP~f~~-~f~~~-~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~ 76 (518)
||.|.+.+ .... ....||+|+++| +||+|++ +|.|. +...+...|+|+|||.| +||||++
T Consensus 745 YV~V~l~g~p~D~-~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D~d---------------ddfiG~~ 808 (885)
T 3ohm_B 745 YVEVDMFGLPVDT-RRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFEEG---------------GKFVGHR 808 (885)
T ss_dssp EEEEEEESSTTTC-BCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEETT---------------TEEEEEE
T ss_pred EEEEEEeCCCccc-ccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEcCC---------------ccEEeeE
Confidence 46666665 1111 123699999875 9999999 69988 66667789999999977 6899999
Q ss_pred EEeccccccccceeEEEeccC
Q 010107 77 TCTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 77 ~~~L~~l~~~~~~~~~~~L~~ 97 (518)
.++|..|.. | -..++|.+
T Consensus 809 ~lpL~~L~~--G-yR~vpL~~ 826 (885)
T 3ohm_B 809 ILPVSAIRS--G-YHYVCLRN 826 (885)
T ss_dssp EEETTTCCC--E-EEEEEEEC
T ss_pred EEEHHHcCC--C-ceEEEecC
Confidence 999999863 2 23578866
No 102
>2b2x_A Integrin alpha-1; computational design, antibody-antigen complex, immune syste; 2.20A {Rattus norvegicus} SCOP: c.62.1.1
Probab=98.06 E-value=8e-05 Score=70.61 Aligned_cols=137 Identities=21% Similarity=0.288 Sum_probs=93.2
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEecCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 356 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~~ 356 (518)
.+.+++.+|-|+| |. .++.+...+..++..++ .+-++-++.|+.. +...|+++
T Consensus 22 ~~div~vlD~SgS------------M~------~~~~~k~~~~~~~~~l~~~~~~~rv~lv~F~~~-----~~~~~~l~- 77 (223)
T 2b2x_A 22 QLDIVIVLDGSNS------------IY------PWESVIAFLNDLLKRMDIGPKQTQVGIVQYGEN-----VTHEFNLN- 77 (223)
T ss_dssp CEEEEEEEECSTT------------CC------CHHHHHHHHHHHHTTSCCSTTSCCEEEEEESSS-----EEEEECTT-
T ss_pred cceEEEEEECCCC------------hh------hHHHHHHHHHHHHHhcccCCCCeEEEEEEeCCC-----ccEEEecC-
Confidence 4899999999997 43 16777777777777775 5667999999875 23346663
Q ss_pred CCCCCcccChHHHHHHHHhhhcccee-cC-CCChHHHHHHHHHHHHh-hhcccCCceEEEEEEeCCCcCCHHHHHHHHHH
Q 010107 357 SNSYCEVEGIPGIMMAYTSALHNVNL-AG-PTLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVVTDLQETKDALVK 433 (518)
Q Consensus 357 ~~~~~~~~g~~~i~~~Y~~~~~~~~~-~g-pt~f~pvi~~~~~~a~~-~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~ 433 (518)
+. ...+.+++ .+..+.. .| .|+....|+.+.+.... ........-.++++||||.-+|-....+++..
T Consensus 78 ~~-----~~~~~~~~----~i~~l~~~gG~~T~~~~aL~~a~~~l~~~~~~~~~~~~~~iillTDG~~~~~~~~~~~~~~ 148 (223)
T 2b2x_A 78 KY-----SSTEEVLV----AANKIVQRGGRQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNYRLKQVIQD 148 (223)
T ss_dssp TC-----CSHHHHHH----HHTTCCCCCCSSCCHHHHHHHHHHTTSSGGGTCCTTSEEEEEEEESSCCTTGGGHHHHHHH
T ss_pred CC-----CCHHHHHH----HHHhhhccCCCCccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCccHHHHHHH
Confidence 11 22344443 4444443 45 49999999988764211 11112345678999999998876656666666
Q ss_pred ccCCCeEEEEEecCCC
Q 010107 434 ASDLPLSILIIGVGGA 449 (518)
Q Consensus 434 as~lPlsiiiVGvG~~ 449 (518)
+....+.|..||||..
T Consensus 149 ~~~~gi~v~~igvG~~ 164 (223)
T 2b2x_A 149 CEDENIQRFSIAILGH 164 (223)
T ss_dssp HHTTTEEEEEEEECGG
T ss_pred HHHCCCEEEEEEecCc
Confidence 6678899999999974
No 103
>1mf7_A Integrin alpha M; cell adhesion; 1.25A {Homo sapiens} SCOP: c.62.1.1 PDB: 1na5_A 1jlm_A 1ido_A 1m1u_A 3q3g_G 1n9z_A 1bhq_1 1bho_1 1idn_1 3qa3_G
Probab=98.05 E-value=3.1e-06 Score=78.50 Aligned_cols=149 Identities=19% Similarity=0.233 Sum_probs=96.5
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccC-CCCcceeeecccCCCCCceeEEecCCCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDS-DKRFPAWGFGARPIDGPVSHCFNLNGSN 358 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~-d~~~~~~gFG~~~~~~~~~~~f~l~~~~ 358 (518)
.+.+++.+|-|+| |.. ..++.+...+..++..++. +-++-++.|+.. +...|+++..
T Consensus 5 ~~div~vlD~SgS------------m~~----~~~~~~k~~~~~~~~~l~~~~~~v~vv~f~~~-----~~~~~~l~~~- 62 (194)
T 1mf7_A 5 DSDIAFLIDGSGS------------IIP----HDFRRMKEFVSTVMEQLKKSKTLFSLMQYSEE-----FRIHFTFKEF- 62 (194)
T ss_dssp CEEEEEEEECCTT------------SCH----HHHHHHHHHHHHHHHHHCCTTEEEEEEEESSS-----EEEEECHHHH-
T ss_pred CeeEEEEEeCCCC------------CCH----HHHHHHHHHHHHHHHhcCCCCeEEEEEEecCC-----ceEEEecCCc-
Confidence 4789999999997 542 3567777777777777763 457899999876 2234655320
Q ss_pred CCCcccChHHHHHHHHhhhccce-ecCCCChHHHHHHHHHHHH-hhhcccCCceEEEEEEeCCCcC-CHHHHHHHHHHcc
Q 010107 359 SYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIAG-QSLANHGQKYFVLLIITDGVVT-DLQETKDALVKAS 435 (518)
Q Consensus 359 ~~~~~~g~~~i~~~Y~~~~~~~~-~~gpt~f~pvi~~~~~~a~-~~~~~~~~~y~vlliltdG~i~-d~~~t~~~i~~as 435 (518)
...+.+ .+.+..+. ..|.|+....|+.+.+... ...........++++||||..+ |.....+++.++.
T Consensus 63 -----~~~~~~----~~~i~~l~~~~g~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~d~~~~~~~~~~~~ 133 (194)
T 1mf7_A 63 -----QNNPNP----RSLVKPITQLLGRTHTATGIRKVVRELFNITNGARKNAFKILVVITDGEKFGDPLGYEDVIPEAD 133 (194)
T ss_dssp -----HHSCCH----HHHHTTCCCCCSCBCHHHHHHHHHHTTTSGGGTCCTTSEEEEEEEESSCCBSCSSCGGGTHHHHH
T ss_pred -----CCHHHH----HHHHHhCcCCCCCchHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCchhhHHHHHHHH
Confidence 001122 23445555 4799999999998875322 1111123456889999999887 6543334444455
Q ss_pred CCCeEEEEEecCCCc-----chhhhhccc
Q 010107 436 DLPLSILIIGVGGAD-----FKEMEILDA 459 (518)
Q Consensus 436 ~lPlsiiiVGvG~~~-----f~~m~~ld~ 459 (518)
...+.|..||||+.. ...|+.+-+
T Consensus 134 ~~gi~v~~igvG~~~~~~~~~~~L~~iA~ 162 (194)
T 1mf7_A 134 REGVIRYVIGVGDAFRSEKSRQELNTIAS 162 (194)
T ss_dssp HTTEEEEEEEESGGGCSHHHHHHHHHHSC
T ss_pred HCCCEEEEEEecccccccccHHHHHHHhC
Confidence 678999999999863 566777663
No 104
>4fx5_A VON willebrand factor type A; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, blood clotting; HET: MSE; 1.73A {Catenulispora acidiphila}
Probab=98.04 E-value=5.6e-05 Score=80.05 Aligned_cols=156 Identities=15% Similarity=0.104 Sum_probs=108.4
Q ss_pred CceeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEecCCC
Q 010107 278 GFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGS 357 (518)
Q Consensus 278 g~~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~ 357 (518)
+..+.+++.||.|+| |.. ..+..+.|..++..++..+.++.++-++.|+.. ....||++..
T Consensus 75 ~~~~dvv~VLD~SGS------------M~~--~~~rl~~ak~a~~~ll~~L~~~drv~lV~Fs~~-----a~~~~p~t~~ 135 (464)
T 4fx5_A 75 GSENVEVIIIDCSGS------------MDY--PRTKMMAAKEATKVAIDTLTDGAFFAVVAGTEG-----ARVVYPTGGQ 135 (464)
T ss_dssp -CCEEEEEEEECCGG------------GGT--TTHHHHHHHHHHHHHHHHSCTTCEEEEEEESSS-----EEEEESSSSS
T ss_pred CCCceEEEEEEcCcc------------cCC--CCchHHHHHHHHHHHHHhCCCCCEEEEEEEcCc-----eEEEecCCcc
Confidence 567999999999997 441 136677888888888888877778999999876 2334565321
Q ss_pred CCCCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCH-HHHHHHHHHccC
Q 010107 358 NSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL-QETKDALVKASD 436 (518)
Q Consensus 358 ~~~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~-~~t~~~i~~as~ 436 (518)
..... ..-.+.-.+.+..+...|.|++..-|..+.+..... ...-.++++||||..++. .+......++..
T Consensus 136 l~~~~----~~~~~~l~~~I~~L~~~GgT~l~~aL~~A~~~l~~~----~~~~~~IILLTDG~~~~~~~~~l~~~~~a~~ 207 (464)
T 4fx5_A 136 LLRAD----YQSRAAAKEAVGRLHANGGTAMGRWLAQAGRIFDTA----PSAIKHAILLTDGKDESETPADLARAIQSSI 207 (464)
T ss_dssp CEECS----HHHHHHHHHHHHTCCCCSCCCHHHHHHHHHHHHTTC----TTSEEEEEEEESSCCTTSCHHHHHHHHHHHT
T ss_pred cccCC----HHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhcC----CCCCCEEEEEcCCCCCCCChHHHHHHHHHhc
Confidence 11011 122233345566777899999999999998876542 244578899999997643 334555555667
Q ss_pred CCeEEEEEecCCC-cchhhhhcccC
Q 010107 437 LPLSILIIGVGGA-DFKEMEILDAD 460 (518)
Q Consensus 437 lPlsiiiVGvG~~-~f~~m~~ld~d 460 (518)
..+.|..||+|.. +...|+.|-..
T Consensus 208 ~~i~i~tiGiG~~~d~~~L~~IA~~ 232 (464)
T 4fx5_A 208 GNFTADCRGIGEDWEPKELRKIADA 232 (464)
T ss_dssp TTCEEEEEEESSSSCHHHHHHHHHH
T ss_pred CCCeEEEEEeCCccCHHHHHHHHHh
Confidence 7899999999964 88888888743
No 105
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.03 E-value=1.1e-05 Score=90.70 Aligned_cols=79 Identities=14% Similarity=0.212 Sum_probs=59.6
Q ss_pred CEEEEEEcC-CCcEEEEEeeeeeeCC-CCCceeeE-EEEE-EEeCceeEEEEEEEEecCCcccccccccCccCcceeEEE
Q 010107 1 MLVVYMKAR-DGALVEVGRTEVVLNS-LNPTWITK-HIIT-YQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEA 76 (518)
Q Consensus 1 ~~vv~~~~~-~~~~~ev~rTevi~~~-lNP~f~~~-f~~~-~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~ 76 (518)
||.|.+.+. ...-....||+|+++| +||+|++. |.|. ...++...|+|+|||.| +||||++
T Consensus 670 YV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~D~d---------------ddfiG~~ 734 (816)
T 3qr0_A 670 YVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVSEEN---------------GKFIGHR 734 (816)
T ss_dssp EEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEEETT---------------SCEEEEE
T ss_pred eEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEEecC---------------CCeeeEE
Confidence 456666651 1112246799999875 99999997 9987 66677789999999976 6899999
Q ss_pred EEeccccccccceeEEEeccC
Q 010107 77 TCTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 77 ~~~L~~l~~~~~~~~~~~L~~ 97 (518)
.++|..|.. | -.+++|.+
T Consensus 735 ~ipL~~L~~--G-yR~vpL~~ 752 (816)
T 3qr0_A 735 VMPLDGIKP--G-YRHVPLRN 752 (816)
T ss_dssp EEESTTCCC--E-EEEEEEEC
T ss_pred EEEHHHcCC--c-ceEEEEeC
Confidence 999999864 2 23578866
No 106
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=98.01 E-value=5.3e-05 Score=71.24 Aligned_cols=141 Identities=16% Similarity=0.177 Sum_probs=93.9
Q ss_pred ceeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEecCCCC
Q 010107 279 FELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSN 358 (518)
Q Consensus 279 ~~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~ 358 (518)
..+++++.+|.|+| +...+ ..++..+.|-..+..++..+. +.++-++.|+.. ....++++.
T Consensus 10 ~~~~iv~vlD~SgS---------M~~~d--~~~~r~~~ak~~~~~~~~~~~-~~~v~lv~F~~~-----~~~~~~~~~-- 70 (218)
T 3ibs_A 10 KGVEVIIALDISNS---------MLAQD--VQPSRLEKAKRLISRLVDELD-NDKVGMIVFAGD-----AFTQLPITS-- 70 (218)
T ss_dssp CCCEEEEEEECSGG---------GGCCS--SSSCHHHHHHHHHHHHHHTCS-SCEEEEEEESSS-----EEEEEEEES--
T ss_pred CCCcEEEEEECCcC---------ccccc--CCcCHHHHHHHHHHHHHHhCC-CCeEEEEEECCC-----ceEeCCCCC--
Confidence 34789999999996 33221 135788888888888888886 457999999876 333466542
Q ss_pred CCCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCHHHHHHHHHHccCCC
Q 010107 359 SYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKASDLP 438 (518)
Q Consensus 359 ~~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as~lP 438 (518)
..+.+.++-...-......|.|++...|+.+.+.... ......++++||||..++- ...+++..+....
T Consensus 71 ------~~~~~~~~l~~l~~~~~~~g~T~l~~al~~a~~~l~~----~~~~~~~ivllTDG~~~~~-~~~~~~~~~~~~~ 139 (218)
T 3ibs_A 71 ------DYISAKMFLESISPSLISKQGTAIGEAINLATRSFTP----QEGVGRAIIVITDGENHEG-GAVEAAKAAAEKG 139 (218)
T ss_dssp ------CHHHHHHHHHTCCGGGCCSCSCCHHHHHHHHHTTSCS----CSSCCEEEEEEECCTTCCS-CHHHHHHHHHTTT
T ss_pred ------CHHHHHHHHHhcCcccCCCCCCcHHHHHHHHHHHHhh----CCCCCcEEEEEcCCCCCCC-cHHHHHHHHHhcC
Confidence 1223333222222233447899999999887654432 2245668899999987643 4455555666778
Q ss_pred eEEEEEecCCC
Q 010107 439 LSILIIGVGGA 449 (518)
Q Consensus 439 lsiiiVGvG~~ 449 (518)
+.|..||||..
T Consensus 140 i~v~~igig~~ 150 (218)
T 3ibs_A 140 IQVSVLGVGMP 150 (218)
T ss_dssp EEEEEEEESCT
T ss_pred CEEEEEEecCC
Confidence 99999999974
No 107
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=98.01 E-value=2.6e-05 Score=72.97 Aligned_cols=147 Identities=9% Similarity=0.119 Sum_probs=97.5
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEecCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 356 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~~ 356 (518)
.+.+++.+|-|+| |. ...++++...+..++..++ .+-++-+..|+.. +...|+|+.
T Consensus 13 ~~divfvlD~SgS------------m~----~~~~~~~k~~~~~~v~~l~~~~~~~rv~vv~fs~~-----~~~~~~l~~ 71 (202)
T 1ijb_A 13 LLDLVFLLDGSSR------------LS----EAEFEVLKAFVVDMMERLRVSQKWVRVAVVEYHDG-----SHAYIGLKD 71 (202)
T ss_dssp CEEEEEEEECBTT------------SC----HHHHHHHHHHHHHHHHTBCBSTTSEEEEEEEESSS-----EEEEECTTC
T ss_pred cccEEEEEECCCC------------CC----HHHHHHHHHHHHHHHHhcccCCCceEEEEEEECCC-----ceEEEecCC
Confidence 4899999999997 54 2457778888888888887 3457889999875 223466642
Q ss_pred CCCCCcccChHHHHHHHHhhhcccee-cCC-CChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCH--HHHHHHHH
Q 010107 357 SNSYCEVEGIPGIMMAYTSALHNVNL-AGP-TLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL--QETKDALV 432 (518)
Q Consensus 357 ~~~~~~~~g~~~i~~~Y~~~~~~~~~-~gp-t~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~--~~t~~~i~ 432 (518)
. ...+.+.+ .+..+.. .|. |+....|+.+.+..... ......-.++++||||.-++- ++..+++.
T Consensus 72 -~-----~~~~~~~~----~i~~l~~~gg~~T~~~~aL~~a~~~~~~~-~~r~~~~~~iillTDG~~~~~~~~~~~~~a~ 140 (202)
T 1ijb_A 72 -R-----KRPSELRR----IASQVKYAGSQVASTSEVLKYTLFQIFSK-IDRPEASRIALLLMASQEPQRMSRNFVRYVQ 140 (202)
T ss_dssp -C-----CCHHHHHH----HHHTCCCCCBSCCCHHHHHHHHHHHTSSS-CSCTTSEEEEEEEECCCCCGGGCTTHHHHHH
T ss_pred -C-----CCHHHHHH----HHHhCcCCCCCcCcHHHHHHHHHHHHhcc-CCCCCCCeEEEEEccCCCCccchHHHHHHHH
Confidence 1 12233333 3344444 443 99999998886432111 012345678999999987642 34445555
Q ss_pred HccCCCeEEEEEecCC-Ccchhhhhcc
Q 010107 433 KASDLPLSILIIGVGG-ADFKEMEILD 458 (518)
Q Consensus 433 ~as~lPlsiiiVGvG~-~~f~~m~~ld 458 (518)
.+....+.|..||||+ .+...|+.+-
T Consensus 141 ~l~~~gi~i~~igvG~~~~~~~L~~iA 167 (202)
T 1ijb_A 141 GLKKKKVIVIPVGIGPHANLKQIRLIE 167 (202)
T ss_dssp HHHHTTEEEEEEEESTTSCHHHHHHHH
T ss_pred HHHHCCCEEEEEecCCcCCHHHHHHHh
Confidence 5556789999999996 5777888776
No 108
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=97.98 E-value=9.2e-06 Score=91.43 Aligned_cols=78 Identities=17% Similarity=0.235 Sum_probs=58.9
Q ss_pred CEEEEEEcC-CCcEEEEEeee-eeeC-CCCCceee-EEEE-EEEeCceeEEEEEEEEecCCcccccccccCccCcceeEE
Q 010107 1 MLVVYMKAR-DGALVEVGRTE-VVLN-SLNPTWIT-KHII-TYQFEVVQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGE 75 (518)
Q Consensus 1 ~~vv~~~~~-~~~~~ev~rTe-vi~~-~lNP~f~~-~f~~-~~~fe~~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~ 75 (518)
||.|.+.+. .... ...||+ ++++ ++||+|++ +|.| .+..++...|+|+|||.| ++|||+
T Consensus 698 YV~V~l~g~p~d~~-~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V~D~d---------------~d~iG~ 761 (799)
T 2zkm_X 698 YVEVELFGLPGDPK-RRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAVMEEG---------------NKFLGH 761 (799)
T ss_dssp EEEEEEECCTTSCC-CCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEEEETT---------------TEEEEE
T ss_pred EEEEEEEecCCCcc-cceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEEEEeC---------------CCccce
Confidence 466777651 1111 136899 8875 59999999 7999 777777889999999977 689999
Q ss_pred EEEeccccccccceeEEEeccC
Q 010107 76 ATCTLSQIVTRKNRSLTLDLVR 97 (518)
Q Consensus 76 ~~~~L~~l~~~~~~~~~~~L~~ 97 (518)
+.++|..|.. | ..+++|.+
T Consensus 762 ~~ipl~~L~~--G-~r~v~L~~ 780 (799)
T 2zkm_X 762 RIIPINALNS--G-YHHLCLHS 780 (799)
T ss_dssp EEEEGGGBCC--E-EEEEEEEC
T ss_pred EeeehhhcCC--C-cEEEeccC
Confidence 9999999853 2 34678865
No 109
>1v7p_C Integrin alpha-2; snake venom, C-type lectin, antagonist, cell adhes glycoprotein, toxin-cell adhesion complex; HET: NAG; 1.90A {Homo sapiens} SCOP: c.62.1.1 PDB: 1aox_A 1dzi_A
Probab=97.96 E-value=6.9e-05 Score=69.73 Aligned_cols=136 Identities=18% Similarity=0.140 Sum_probs=92.2
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEecCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 356 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~~ 356 (518)
.+.+++.+|-|+| |. .++++...+..++..++ .+-++-++.|+.. +...|+|+
T Consensus 6 ~~div~vlD~SgS------------m~------~~~~~k~~~~~~~~~l~~~~~~~rvglv~f~~~-----~~~~~~l~- 61 (200)
T 1v7p_C 6 LIDVVVVCDESNS------------IY------PWDAVKNFLEKFVQGLDIGPTKTQVGLIQYANN-----PRVVFNLN- 61 (200)
T ss_dssp CEEEEEEEECCTT------------CC------CHHHHHHHHHHHHHTSCBSTTSEEEEEEEESSS-----EEEEECTT-
T ss_pred cccEEEEEECCCC------------cc------cHHHHHHHHHHHHHhcCCCCCceEEEEEEECCC-----ceEEEeCC-
Confidence 3789999999997 43 16777777777777776 4567889999876 22357775
Q ss_pred CCCCCcccChHHHHHHHHhhhcccee-cC-CCChHHHHHHHHHHHH-hhhcccCCceEEEEEEeCCCcCCHHHHHHHHHH
Q 010107 357 SNSYCEVEGIPGIMMAYTSALHNVNL-AG-PTLFGPVISNAALIAG-QSLANHGQKYFVLLIITDGVVTDLQETKDALVK 433 (518)
Q Consensus 357 ~~~~~~~~g~~~i~~~Y~~~~~~~~~-~g-pt~f~pvi~~~~~~a~-~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~ 433 (518)
+. ...+.++++- ..+.. .| .|+....|+.+.+... .........-.++++||||..+|-....+++..
T Consensus 62 ~~-----~~~~~~~~~i----~~l~~~~G~~T~~~~al~~a~~~~~~~~~g~r~~~~~~ivllTDG~~~~~~~~~~~~~~ 132 (200)
T 1v7p_C 62 TY-----KTKEEMIVAT----SQTSQYGGDLTNTFGAIQYARKYAYSAASGGRRSATKVMVVVTDGESHDGSMLKAVIDQ 132 (200)
T ss_dssp TC-----SSHHHHHHHH----HHCCCCCCSCCCHHHHHHHHHHHTTSGGGTCCTTSEEEEEEEESSCCSCGGGHHHHHHH
T ss_pred Cc-----CCHHHHHHHH----HhhhccCCCCCcHHHHHHHHHHhhcccccCCCCCCCeEEEEEccCCCCCcccHHHHHHH
Confidence 21 2344444433 34444 35 5999999999887422 111112345678999999999887655566666
Q ss_pred ccCCCeEEEEEecCC
Q 010107 434 ASDLPLSILIIGVGG 448 (518)
Q Consensus 434 as~lPlsiiiVGvG~ 448 (518)
+....+.|..||||.
T Consensus 133 ~~~~gi~i~~igvg~ 147 (200)
T 1v7p_C 133 CNHDNILRFGIAVLG 147 (200)
T ss_dssp HHHTTEEEEEEEECH
T ss_pred HHHCCCEEEEEEecc
Confidence 667889999999963
No 110
>1pt6_A Integrin alpha-1; cell adhesion; 1.87A {Homo sapiens} SCOP: c.62.1.1 PDB: 4a0q_A 1qcy_A 1qc5_A 1qc5_B 1ck4_A 1mhp_A
Probab=97.90 E-value=0.00018 Score=67.62 Aligned_cols=137 Identities=20% Similarity=0.284 Sum_probs=91.1
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEecCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLNG 356 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~~ 356 (518)
.+.+++.+|-|+| |. .++.+...+..++..++ .+-++-++.|+.. +...|+++.
T Consensus 7 ~~div~vlD~SgS------------m~------~~~~~k~~~~~~~~~l~~~~~~~~v~lv~F~~~-----~~~~~~l~~ 63 (213)
T 1pt6_A 7 QLDIVIVLDGSNS------------IY------PWDSVTAFLNDLLKRMDIGPKQTQVGIVQYGEN-----VTHEFNLNK 63 (213)
T ss_dssp CEEEEEEEECCTT------------CC------CHHHHHHHHHHHHTTSCBSTTSBEEEEEEESSS-----EEEEECTTT
T ss_pred CccEEEEEECCCC------------hh------hHHHHHHHHHHHHHhcCCCCCCeEEEEEEeCCC-----ccEEEeccc
Confidence 4789999999997 43 15666666666677665 5667999999876 223466631
Q ss_pred CCCCCcccChHHHHHHHHhhhcccee-cC-CCChHHHHHHHHHHH-HhhhcccCCceEEEEEEeCCCcCCHHHHHHHHHH
Q 010107 357 SNSYCEVEGIPGIMMAYTSALHNVNL-AG-PTLFGPVISNAALIA-GQSLANHGQKYFVLLIITDGVVTDLQETKDALVK 433 (518)
Q Consensus 357 ~~~~~~~~g~~~i~~~Y~~~~~~~~~-~g-pt~f~pvi~~~~~~a-~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~ 433 (518)
. ...+.+++ .+..+.. .| .|+.+..|+.|.+.. ............++++||||..+|-....+++..
T Consensus 64 -~-----~~~~~~~~----~i~~l~~~~G~~T~~~~aL~~a~~~l~~~~~~~r~~~~~~iillTDG~~~~~~~~~~~~~~ 133 (213)
T 1pt6_A 64 -Y-----SSTEEVLV----AAKKIVQRGGRQTMTALGTDTARKEAFTEARGARRGVKKVMVIVTDGESHDNHRLKKVIQD 133 (213)
T ss_dssp -C-----SSHHHHHH----HHHTCCCCCCSSCCHHHHHHHHHHTTTSGGGTCCTTCEEEEEEEESSCCSCSHHHHHHHHH
T ss_pred -c-----CCHHHHHH----HHHhccCCCCCcccHHHHHHHHHHHhcCcccCCCCCCCeEEEEEcCCCCCCCccHHHHHHH
Confidence 1 23344444 3334443 45 499999999887642 1111112346788999999998876555666666
Q ss_pred ccCCCeEEEEEecCCC
Q 010107 434 ASDLPLSILIIGVGGA 449 (518)
Q Consensus 434 as~lPlsiiiVGvG~~ 449 (518)
+....+.|..||||..
T Consensus 134 ~~~~gi~i~~igig~~ 149 (213)
T 1pt6_A 134 CEDENIQRFSIAILGS 149 (213)
T ss_dssp HHHTTEEEEEEEECHH
T ss_pred HHHCCCEEEEEEeccc
Confidence 6677899999999974
No 111
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=97.87 E-value=0.00025 Score=69.34 Aligned_cols=147 Identities=10% Similarity=0.078 Sum_probs=101.7
Q ss_pred EEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccc---ccCCCCcceeeecccCCCCCceeEEecCCCCC
Q 010107 283 FMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQV---YDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 359 (518)
Q Consensus 283 ~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~---yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 359 (518)
++++||-|.|= - ..+..+|.++.+..++-.++.. -++..++-+..|++..+ .+ .-+++.+
T Consensus 6 tViviD~S~SM---------~--~~D~~PsRl~a~k~Av~~li~~~~~~nPed~VGLVtfag~~~--~v--l~plT~D-- 68 (268)
T 4b4t_W 6 TVLVIDNSEYS---------R--NGDFPRTRFEAQIDSVEFIFQAKRNSNPENTVGLISGAGANP--RV--LSTFTAE-- 68 (268)
T ss_dssp EEEEECCSSTT---------S--STTSSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSC--EE--EEEEESC--
T ss_pred EEEEEECCHHH---------h--CCCCCCcHHHHHHHHHHHHHHHHhhCCCcceEEEEEecCCcc--ee--ccCCcch--
Confidence 68899999972 1 2233578888877777776664 44566788999976511 11 1133222
Q ss_pred CCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcC-CHHHHHHHHHHccCCC
Q 010107 360 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT-DLQETKDALVKASDLP 438 (518)
Q Consensus 360 ~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~-d~~~t~~~i~~as~lP 438 (518)
... -...|..++..|-|+++.-|+.|...++... ....-..++++|||.+. |.++.++++.++.+.-
T Consensus 69 ------~~~----il~aL~~l~~~G~T~l~~gL~~A~~aLk~~~--~k~~~~rIIlf~ds~~~~~~~~l~~lak~lkk~g 136 (268)
T 4b4t_W 69 ------FGK----ILAGLHDTQIEGKLHMATALQIAQLTLKHRQ--NKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNN 136 (268)
T ss_dssp ------HHH----HHHHHTTCCCCSCCCHHHHHHHHHHHHHTCS--CTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHHT
T ss_pred ------HHH----HHHHhhhcCcCCCCChHHHHHHHHHHHHhcc--cCCCceEEEEEECCCCCCCHHHHHHHHHHHHHcC
Confidence 222 2456778899999999999999999887653 34455567788888764 6667888888888888
Q ss_pred eEEEEEecCC--Ccchhhhhcc
Q 010107 439 LSILIIGVGG--ADFKEMEILD 458 (518)
Q Consensus 439 lsiiiVGvG~--~~f~~m~~ld 458 (518)
++|-+||+|. .+-..|+.|-
T Consensus 137 I~v~vIgFG~~~~n~~kLe~l~ 158 (268)
T 4b4t_W 137 VAVDIINFGEIEQNTELLDEFI 158 (268)
T ss_dssp EEEEEEEESSCCSSCCHHHHHH
T ss_pred CEEEEEEeCCCccchHHHHHHH
Confidence 8888888885 4667777763
No 112
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=97.85 E-value=0.00035 Score=65.01 Aligned_cols=167 Identities=16% Similarity=0.175 Sum_probs=108.7
Q ss_pred eEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc---cCCCCcceeeecccCCCCCceeEEecCCCC
Q 010107 282 NFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY---DSDKRFPAWGFGARPIDGPVSHCFNLNGSN 358 (518)
Q Consensus 282 ~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~y---d~d~~~~~~gFG~~~~~~~~~~~f~l~~~~ 358 (518)
.++++||.|.| +...+ ..+|..+.|..++..++..| .+..++-+..|++... .+ .-|++.+
T Consensus 4 ~lvlvlD~S~S---------M~~~D--~~psRl~~ak~~~~~~~~~~~~~~~~d~vGLV~fa~~~a--~~--~~plT~d- 67 (192)
T 2x5n_A 4 ATMILIDNSEW---------MINGD--YIPTRFEAQKDTVHMIFNQKINDNPENMCGLMTIGDNSP--QV--LSTLTRD- 67 (192)
T ss_dssp EEEEEECCSGG---------GGCTT--SSSCHHHHHHHHHHHHHHHHHHHCTTCEEEEEECCTTSC--CE--EEEEESC-
T ss_pred EEEEEEECCHh---------hccCC--CCCCHHHHHHHHHHHHHHHHHhcCCCCeEEEEEEcCCCc--EE--ecCCCCC-
Confidence 57899999995 43322 24789999888877766544 3456788999987411 11 1344433
Q ss_pred CCCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCce-EEEEEEeCCCcCCHHHHHHHHHHccCC
Q 010107 359 SYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKY-FVLLIITDGVVTDLQETKDALVKASDL 437 (518)
Q Consensus 359 ~~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y-~vlliltdG~i~d~~~t~~~i~~as~l 437 (518)
.++-.+.|..+.+.|.|++...|..|.+..++.. ..... -|+++++|+.-.|..+..+++..+.+.
T Consensus 68 -----------~~~i~~~L~~l~~~g~t~l~~aL~~A~~~l~~~~--~~~~~~riiil~~~~~~~~~~~~~~~a~~lk~~ 134 (192)
T 2x5n_A 68 -----------YGKFLSAMHDLPVRGNAKFGDGIQIAQLALKHRE--NKIQRQRIVAFVGSPIVEDEKNLIRLAKRMKKN 134 (192)
T ss_dssp -----------HHHHHHHHTTCCCCSCCCHHHHHHHHHHHHHTCS--CTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHT
T ss_pred -----------HHHHHHHHHcCCCCCCchHHHHHHHHHHHHHhcc--ccCCCceEEEEEECCCCCCchhHHHHHHHHHHC
Confidence 2233455666888999999999999988766532 11223 355555555556777888888888889
Q ss_pred CeEEEEEecCCCcchh-hhhcccCCCcccccCCCCcccCceeeeeeCcccCC
Q 010107 438 PLSILIIGVGGADFKE-MEILDADKGERLESSTGRVASRDIVQFVPLKDVQN 488 (518)
Q Consensus 438 PlsiiiVGvG~~~f~~-m~~ld~d~~~~l~~~~g~~~~rD~v~Fv~~~~~~~ 488 (518)
.+.|.+||+|..+... |+.|- +. .. + -|+.+|+...+...
T Consensus 135 gi~v~~Ig~G~~~~~~~l~~la-~~-~n---~------~~~s~~~~~~~~~~ 175 (192)
T 2x5n_A 135 NVAIDIIHIGELQNESALQHFI-DA-AN---S------SDSCHLVSIPPSPQ 175 (192)
T ss_dssp TEEEEEEEESCC---CHHHHHH-HH-HC---S------TTCCEEEEECCCSS
T ss_pred CCEEEEEEeCCCCccHHHHHHH-Hh-cc---C------CCceEEEEecCcch
Confidence 9999999999875421 77776 32 11 1 15788887766653
No 113
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=97.81 E-value=0.00016 Score=66.50 Aligned_cols=147 Identities=14% Similarity=0.189 Sum_probs=95.7
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccC---CCCcceeeecccCCCCCceeEEecCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDS---DKRFPAWGFGARPIDGPVSHCFNLNG 356 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~---d~~~~~~gFG~~~~~~~~~~~f~l~~ 356 (518)
.+.+++.+|-|+| |. .+.++.+...+..++..++. .-++-++.|+.. +...|+++.
T Consensus 5 ~~div~vlD~SgS------------m~----~~~~~~~k~~~~~~~~~l~~~~~~~rv~lv~f~~~-----~~~~~~l~~ 63 (189)
T 1atz_A 5 PLDVILLLDGSSS------------FP----ASYFDEMKSFAKAFISKANIGPRLTQVSVLQYGSI-----TTIDVPWNV 63 (189)
T ss_dssp CEEEEEEEECSSS------------SC----HHHHHHHHHHHHHHHHHSCBSTTSEEEEEEEESSS-----EEEEECTTC
T ss_pred ceeEEEEEeCCCC------------CC----hhhHHHHHHHHHHHHHhcCcCCCCeEEEEEEECCc-----ceEEEecCC
Confidence 4789999999997 54 24677777777777777752 246889999875 223466632
Q ss_pred CCCCCcccChHHHHHHHHhhhccce-ecCCCChHHHHHHHHHHHHhhhc-ccCCceEEEEEEeCCCc-CCHHHHHHHHHH
Q 010107 357 SNSYCEVEGIPGIMMAYTSALHNVN-LAGPTLFGPVISNAALIAGQSLA-NHGQKYFVLLIITDGVV-TDLQETKDALVK 433 (518)
Q Consensus 357 ~~~~~~~~g~~~i~~~Y~~~~~~~~-~~gpt~f~pvi~~~~~~a~~~~~-~~~~~y~vlliltdG~i-~d~~~t~~~i~~ 433 (518)
....+.+.++- ..+. ..|.|+....|+.|.+....... .......++++||||.. +|..+..+.+
T Consensus 64 ------~~~~~~~~~~i----~~l~~~~g~T~~~~aL~~a~~~l~~~~~g~r~~~~~~vivltdg~~~~~~~~~~~~~-- 131 (189)
T 1atz_A 64 ------VPEKAHLLSLV----DVMQREGGPSQIGDALGFAVRYLTSEMHGARPGASKAVVILVTDVSVDSVDAAADAA-- 131 (189)
T ss_dssp ------CCCHHHHHHHH----HTCCCCCCCCCHHHHHHHHHHHHHSCCTTCCTTSEEEEEEEECSCCSSCCHHHHHHH--
T ss_pred ------CCCHHHHHHHH----HhCcCCCCcchHHHHHHHHHHHHhccccCCCCCCCcEEEEEeCCCCCchHHHHHHHH--
Confidence 12234444433 3333 36889999999999886654210 11234567788888765 4444444444
Q ss_pred ccCCCeEEEEEecCC-CcchhhhhcccC
Q 010107 434 ASDLPLSILIIGVGG-ADFKEMEILDAD 460 (518)
Q Consensus 434 as~lPlsiiiVGvG~-~~f~~m~~ld~d 460 (518)
....+.|..||||+ .+-..|+.+-+.
T Consensus 132 -~~~gi~v~~igvG~~~~~~~L~~iA~~ 158 (189)
T 1atz_A 132 -RSNRVTVFPIGIGDRYDAAQLRILAGP 158 (189)
T ss_dssp -HHTTEEEEEEEESSSSCHHHHHHHTGG
T ss_pred -HHCCCEEEEEEcCCcCCHHHHHHHHCC
Confidence 45689999999998 577778777743
No 114
>2x31_A Magnesium-chelatase 60 kDa subunit; ligase, bacteriochlorophyll biosynthesis, photosynthesis; 7.50A {Rhodobacter capsulatus}
Probab=97.71 E-value=5.2e-06 Score=76.54 Aligned_cols=146 Identities=14% Similarity=0.084 Sum_probs=89.0
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEecCCCCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 359 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 359 (518)
..++++.||.|+| |... +...-.+++..+..-+ +..+.++-++.|+...... .+++.
T Consensus 5 ~~~vv~vlD~SgS------------M~~~-~~~~~k~~~~~~~~~~--~~~~~~v~lv~f~~~~~~~----~~~~~---- 61 (189)
T 2x31_A 5 DRVLIFAVDASGS------------AAVA-RLSEAKGAVELLLGRA--YAARDHVSLITFRGTAAQV----LLQPS---- 61 (189)
T ss_dssp CCEEEEEEECCTT------------SCC---CHHHHHHHHHHHHHS--CTTTSCCCEEEESBSCCCB----CTTTC----
T ss_pred CeEEEEEEECCCC------------CCch-HHHHHHHHHHHHHHHh--cCCCcEEEEEEECCCCceE----ecCCC----
Confidence 4689999999997 5322 3344444444444322 3566679999999631110 12221
Q ss_pred CCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCH-----------HHHH
Q 010107 360 YCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL-----------QETK 428 (518)
Q Consensus 360 ~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~-----------~~t~ 428 (518)
...+.+ .+.+..+...|.|++.+.|..+.+...+.. ....-.++++||||..++- +++.
T Consensus 62 ----~~~~~~----~~~i~~l~~~g~T~~~~al~~a~~~l~~~~--~~~~~~~ivliTDG~~~~~~~~~~~~~~~~~~~~ 131 (189)
T 2x31_A 62 ----RSLTQT----KRQLQGLPGGGGTPLASGMEMAMVTAKQAR--SRGMTPTIALLTDGRGNIALDGTANRELAGEQAT 131 (189)
T ss_dssp ----SCHHHH----HHHHHHCCCCBCCCCHHHHHHHHHHHHTCT--TTCSSEEEEECCBSCCSSCCTHHHHHGGGTCCCE
T ss_pred ----CCHHHH----HHHHhcCCCCCCCCHHHHHHHHHHHHHhcc--CCCCceEEEEECCCCCCCCCCccccccchhHHHH
Confidence 123333 344555667899999999999998876532 1234568899999987642 1122
Q ss_pred HHHHHccCCCeEEEEEecCCCcchhhhhcc
Q 010107 429 DALVKASDLPLSILIIGVGGADFKEMEILD 458 (518)
Q Consensus 429 ~~i~~as~lPlsiiiVGvG~~~f~~m~~ld 458 (518)
+++..+....+.++.||+|..+...|++|-
T Consensus 132 ~~~~~~~~~gi~v~~ig~g~~~~~~L~~iA 161 (189)
T 2x31_A 132 KVARAIRASGMPAVIIDTAMRPNPALVDLA 161 (189)
T ss_dssp EEEECTGGGGSCCTHHHHHHSSCSSSCSTT
T ss_pred HHHHHHHHcCCeEEEEecCCCCHHHHHHHH
Confidence 222333345678888999987666666665
No 115
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=97.69 E-value=0.00015 Score=77.50 Aligned_cols=156 Identities=17% Similarity=0.217 Sum_probs=103.8
Q ss_pred cCceeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccc---cCCCCcceeeecccCCCCCceeEEe
Q 010107 277 GGFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVY---DSDKRFPAWGFGARPIDGPVSHCFN 353 (518)
Q Consensus 277 ~g~~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~y---d~d~~~~~~gFG~~~~~~~~~~~f~ 353 (518)
....+++++.||-|+| |. ...+++|...+..++..+ ..+-++-+..|+.. ....|+
T Consensus 6 ~~~~~divfvlD~SgS------------M~----~~~~~~~k~~~~~l~~~l~~~~~~~rv~lv~f~~~-----~~~~~~ 64 (509)
T 2odp_A 6 RSGHLNLYLLLDASQS------------VS----ENDFLIFKESASLMVDRIFSFEINVSVAIITFASE-----PKVLMS 64 (509)
T ss_dssp SSSEEEEEEEEECSTT------------SC----HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEESSS-----EEEEEC
T ss_pred CCCCeeEEEEEeCCCc------------cc----hhhHHHHHHHHHHHHHHhhccCCCceEEEEEccCC-----CceeEe
Confidence 4557899999999997 54 235677777777776665 56777999999875 223465
Q ss_pred cCCCCCCCcccChHHHHHHHHhhhccceec-----CCCChHHHHHHHHHHHHhhhcccC-------CceEEEEEEeCCCc
Q 010107 354 LNGSNSYCEVEGIPGIMMAYTSALHNVNLA-----GPTLFGPVISNAALIAGQSLANHG-------QKYFVLLIITDGVV 421 (518)
Q Consensus 354 l~~~~~~~~~~g~~~i~~~Y~~~~~~~~~~-----gpt~f~pvi~~~~~~a~~~~~~~~-------~~y~vlliltdG~i 421 (518)
++ .+.-...+.+.+ .+..+... |.|+.+..|+.|.+.......... ..-.++++||||.-
T Consensus 65 l~----~~~~~~~~~~~~----~l~~l~~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~~~~iillTDG~~ 136 (509)
T 2odp_A 65 VL----NDNSRDMTEVIS----SLENANYKDHENGTGTNTYAALNSVYLMMNNQMRLLGMETMAWQEIRHAIILLTDGKS 136 (509)
T ss_dssp TT----SGGGGCHHHHHH----HHHTCCGGGGTTCCSCCHHHHHHHHHHHHHHHHHHHCTTSHHHHTEEEEEEEESCSCC
T ss_pred cc----CCCCCCHHHHHH----HHHhcccccCCCCCCccHHHHHHHHHHHHhhcccccccccccccccceEEEEECCCCc
Confidence 53 122223444444 33344443 889999999999886643221111 24578899999976
Q ss_pred CC---HHHHHHHHHHc------cCCCeEEEEEecCC--CcchhhhhcccCC
Q 010107 422 TD---LQETKDALVKA------SDLPLSILIIGVGG--ADFKEMEILDADK 461 (518)
Q Consensus 422 ~d---~~~t~~~i~~a------s~lPlsiiiVGvG~--~~f~~m~~ld~d~ 461 (518)
++ ..+..+.+.+. ....+.|..||||+ .+...|+.|-+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~iGvG~~~~~~~~L~~iA~~~ 187 (509)
T 2odp_A 137 NMGGSPKTAVDHIREILNINQKRNDYLDIYAIGVGKLDVDWRELNELGSKK 187 (509)
T ss_dssp CSSSCTHHHHHHHHHHTTCCSTTGGGEEEEEEEESSSCCCHHHHHHHSCCC
T ss_pred cCCCChhHHHHHHHHHhhccccccCceEEEEEEcCCCcccHHHHHhhccCC
Confidence 54 45555555542 26678899999998 6889998888443
No 116
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=97.62 E-value=0.00039 Score=77.69 Aligned_cols=155 Identities=13% Similarity=0.183 Sum_probs=100.5
Q ss_pred cCceeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEe
Q 010107 277 GGFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFN 353 (518)
Q Consensus 277 ~g~~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~ 353 (518)
.+..+++++.||-|+| |.. ..++++...+..++..++ ..-++-+.-|+.. +...++
T Consensus 240 ~~~~~div~vlD~SgS------------M~~----~~~~~~k~~~~~~i~~l~~~~~~~rv~lv~f~~~-----~~~~~~ 298 (741)
T 3hrz_D 240 PSGSMNIYLVLDGSGS------------IGA----SDFTGAKKCLVNLIEKVASYGVKPRYGLVTYATY-----PKIWVK 298 (741)
T ss_dssp TTCEEEEEEEEECSTT------------TCH----HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSS-----EEEEEC
T ss_pred CCCceeEEEEeccCCc------------ccc----cchHHHHHHHHHHHHhhhccCCCceEEEEEeccC-----CceeEe
Confidence 3457899999999997 542 335555555555555444 4456899999875 233466
Q ss_pred cCCCCCCCcccChHHHHHHHHhhhccce-----ecCCCChHHHHHHHHHHHHhhh----cccCCceEEEEEEeCCCcC--
Q 010107 354 LNGSNSYCEVEGIPGIMMAYTSALHNVN-----LAGPTLFGPVISNAALIAGQSL----ANHGQKYFVLLIITDGVVT-- 422 (518)
Q Consensus 354 l~~~~~~~~~~g~~~i~~~Y~~~~~~~~-----~~gpt~f~pvi~~~~~~a~~~~----~~~~~~y~vlliltdG~i~-- 422 (518)
|+. ..-...+.+++ .+..+. ..|.|+.+..|+.|.+...... ......-.++++||||.-+
T Consensus 299 l~~----~~~~~~~~~~~----~i~~l~~~~~~~~ggT~~~~aL~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~n~g 370 (741)
T 3hrz_D 299 VSE----ADSSNADWVTK----QLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMG 370 (741)
T ss_dssp TTS----GGGGCHHHHHH----HHTTCCGGGGSSSCCCCHHHHHHHHHHHHCCC--CCCTTGGGEEEEEEEEECSCCCSS
T ss_pred ecc----cCCcCHHHHHH----HHHhcccccccCCCChHHHHHHHHHHHHHhhhhhccccchhccCeEEEEECCCccccC
Confidence 543 11123334444 344444 6889999999999988762110 0112356789999999654
Q ss_pred -CHHHHHHHHHH----------ccCCCeEEEEEecCC-CcchhhhhcccC
Q 010107 423 -DLQETKDALVK----------ASDLPLSILIIGVGG-ADFKEMEILDAD 460 (518)
Q Consensus 423 -d~~~t~~~i~~----------as~lPlsiiiVGvG~-~~f~~m~~ld~d 460 (518)
|..+..+.|.+ +....+.|..||||+ .+-..|++|-..
T Consensus 371 ~~p~~~~~~i~~~~~~~~~a~~~~~~gi~i~~igvG~~~~~~~L~~ia~~ 420 (741)
T 3hrz_D 371 GDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASK 420 (741)
T ss_dssp SCTHHHHHHHHHHTTCSSCTTCCCGGGEEEEEEECSSSCCHHHHHHHSCC
T ss_pred CCchHHHHHHHHHhhcccccccccccCeeEEEEeCCCcCCHHHHHHHhcC
Confidence 55666666663 345678999999998 588888888744
No 117
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=97.52 E-value=0.00048 Score=73.14 Aligned_cols=156 Identities=13% Similarity=0.169 Sum_probs=100.2
Q ss_pred eeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccc---ccCCCCcceeeecccCCCCCceeEEecCCC
Q 010107 281 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQV---YDSDKRFPAWGFGARPIDGPVSHCFNLNGS 357 (518)
Q Consensus 281 ~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~---yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~ 357 (518)
+.+++.+|-|+| |.. +.++.|...+..++.. +..+-++-++.|+.. ....++++
T Consensus 2 ~div~vlD~SgS------------M~~----~~~~~~k~~~~~~~~~l~~~~~~~~v~lv~f~~~-----~~~~~~~~-- 58 (497)
T 1rrk_A 2 MNIYLVLDGSDS------------IGA----SNFTGAKKVLVNLIEKVASYGVKPRYGLVTYATY-----PKIWVKVS-- 58 (497)
T ss_dssp EEEEEEEECSTT------------TCH----HHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESSS-----EEEEECTT--
T ss_pred eeEEEEEECCCC------------cch----hhHHHHHHHHHHHHHHhhccCCCceEEEEEecCC-----ceEeeccc--
Confidence 678999999997 542 4566666666665554 444667999999875 22234432
Q ss_pred CCCCcccChHHHHHHHHhhhccc-eecCCCChHHHHHHHHHHHHhhhc----ccCCceEEEEEEeCCCcC---CHHHHHH
Q 010107 358 NSYCEVEGIPGIMMAYTSALHNV-NLAGPTLFGPVISNAALIAGQSLA----NHGQKYFVLLIITDGVVT---DLQETKD 429 (518)
Q Consensus 358 ~~~~~~~g~~~i~~~Y~~~~~~~-~~~gpt~f~pvi~~~~~~a~~~~~----~~~~~y~vlliltdG~i~---d~~~t~~ 429 (518)
.|.-...+.+.++-.+.-..- ...|.|+....|+.|.+....... .....-.++++||||.-+ |..+..+
T Consensus 59 --~~~~~~~~~~~~~l~~l~~~~~~~~g~T~~~~al~~a~~~l~~~~~~~~~~~~~~~~~iillTDG~~~~g~~~~~~~~ 136 (497)
T 1rrk_A 59 --EADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDVPPEGWNRTRHVIILMTDGLHNMGGDPITVID 136 (497)
T ss_dssp --SGGGGCHHHHHHHHHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC------CGGGCEEEEEEEECSCCCSSSCTHHHHH
T ss_pred --cccccCHHHHHHHHHhCcCccccccCccCHHHHHHHHHHHhhhhhccccccccccceEEEEEeCCCcccCCChhHHHH
Confidence 233344555555443332211 256789999999999887632110 002356789999999776 5667777
Q ss_pred HHHHcc----------CCCeEEEEEecCC-CcchhhhhcccCC
Q 010107 430 ALVKAS----------DLPLSILIIGVGG-ADFKEMEILDADK 461 (518)
Q Consensus 430 ~i~~as----------~lPlsiiiVGvG~-~~f~~m~~ld~d~ 461 (518)
.+.+.. ...+-|..||||+ .+...|+.|-+..
T Consensus 137 ~~~~~~~~~~~~~~~~~~~i~v~~igvG~~~~~~~L~~iA~~~ 179 (497)
T 1rrk_A 137 EIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQVNINALASKK 179 (497)
T ss_dssp HHHHHTTCSSCC-CCCGGGEEEEEEECSSSCCHHHHHHHSCCC
T ss_pred HHHHHhhhhcccccchhcCeeEEEecCCCccCHHHHHHHhcCC
Confidence 766552 2278899999998 5888888887443
No 118
>3zqk_A VON willebrand factor; blood clotting, adamts-13, force sensor, VON willebrand DISE domain, haemostasis; HET: NAG; 1.70A {Homo sapiens} PDB: 3ppv_A 3ppx_A 3ppw_A 3ppy_A 3gxb_A*
Probab=97.49 E-value=0.00018 Score=67.00 Aligned_cols=143 Identities=15% Similarity=0.200 Sum_probs=93.2
Q ss_pred ceeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccccc---CCCCcceeeecccCCCCCceeEEecC
Q 010107 279 FELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYD---SDKRFPAWGFGARPIDGPVSHCFNLN 355 (518)
Q Consensus 279 ~~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd---~d~~~~~~gFG~~~~~~~~~~~f~l~ 355 (518)
..+.+++.||-|.| |. ...++++...+..++..++ ..-++-+..|+.. +...|+|+
T Consensus 20 ~~~DivfvlD~S~S------------m~----~~~~~~~k~~~~~~~~~l~~~~~~~rv~vv~fs~~-----~~~~~~l~ 78 (199)
T 3zqk_A 20 MVLDVAFVLEGSDK------------IG----EADFNRSKEFMEEVIQRMDVGQDSIHVTVLQYSYM-----VTVEYPFS 78 (199)
T ss_dssp CCCEEEEEEECCTT------------TC----HHHHHHHHHHHHHHHHHSCBSTTSBEEEEEEESSS-----EEEEECTT
T ss_pred CCcCEEEEEECCCC------------CC----HHHHHHHHHHHHHHHHhcCCCCCceEEEEEEECCc-----ccEEEecC
Confidence 44889999999997 44 2457777777777777774 5567889999875 33457765
Q ss_pred CCCCCCcccChHHHHHHHHhhhcccee-cCC-CChHHHHHHHHHHHHh-hhcccCCceEEEEEEeCCCcCCHHHHHHHHH
Q 010107 356 GSNSYCEVEGIPGIMMAYTSALHNVNL-AGP-TLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVVTDLQETKDALV 432 (518)
Q Consensus 356 ~~~~~~~~~g~~~i~~~Y~~~~~~~~~-~gp-t~f~pvi~~~~~~a~~-~~~~~~~~y~vlliltdG~i~d~~~t~~~i~ 432 (518)
. ....+.+.++-. .+.. .|+ |+....|+.+.+.... ..........++++||||...|.-.
T Consensus 79 ~------~~~~~~~~~~i~----~l~~~gg~~T~~~~aL~~a~~~l~~~~~g~r~~~~~~iillTDG~~~d~v~------ 142 (199)
T 3zqk_A 79 E------AQSKGDILQRLR----EIRYQGGNRTNTGLALRYLSDHSFLVSQGDREQAPNLVYMVTGNPASDEIK------ 142 (199)
T ss_dssp S------CCCHHHHHHHHH----HCCCCCCSCCCHHHHHHHCCCCCTCGGGTCCTTSCEEEEEEECSCCSSCCC------
T ss_pred C------cCCHHHHHHHHH----hCcCCCCCcChHHHHHHHHHHHhhCcccCCCCCCCeEEEEEeCCCCchHHH------
Confidence 2 122344544433 3333 453 9999888877653211 1111224457899999998765321
Q ss_pred HccCCCeEEEEEecC-CCcchhhhhccc
Q 010107 433 KASDLPLSILIIGVG-GADFKEMEILDA 459 (518)
Q Consensus 433 ~as~lPlsiiiVGvG-~~~f~~m~~ld~ 459 (518)
++ ...+.|.-|||| +.+...|+.+-+
T Consensus 143 ~~-~~~v~v~~iGiG~~~~~~~L~~iA~ 169 (199)
T 3zqk_A 143 RL-PGDIQVVPIGVGPNANVQELERIGW 169 (199)
T ss_dssp CC-CTTEEEEEEEESTTCCHHHHHHHHT
T ss_pred HH-hCCCEEEEEEcCCCCCHHHHHHHhC
Confidence 11 257889999999 568888888874
No 119
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=97.47 E-value=0.00014 Score=66.57 Aligned_cols=143 Identities=19% Similarity=0.193 Sum_probs=87.0
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCC-CcceeeecccCCCCCceeEEecCCCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDK-RFPAWGFGARPIDGPVSHCFNLNGSN 358 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d~-~~~~~gFG~~~~~~~~~~~f~l~~~~ 358 (518)
.+.+++.+|-|+| |.+ ..++.+...+..++..++++. ++-+..|+.. +...|+|+..
T Consensus 2 ~~divfvlD~S~S------------m~~----~~~~~~k~~~~~~~~~l~~~~~rv~vv~fs~~-----~~~~~~l~~~- 59 (179)
T 1mjn_A 2 NVDLVFLFDGSMS------------LQP----DEFQKILDFMKDVMKKCSNTSYQFAAVQFSTS-----YKTEFDFSDY- 59 (179)
T ss_dssp CEEEEEEEECBTT------------CCH----HHHHHHHHHHHHHHHHTTTSSEEEEEEEESSS-----EEEEECHHHH-
T ss_pred CccEEEEEeCCCC------------CCH----HHHHHHHHHHHHHHHHhCCCCeEEEEEEECCc-----eeEEEcCccc-
Confidence 3689999999997 442 356777777777777776554 7899999876 2234655310
Q ss_pred CCCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHh-hhcccCCceEEEEEEeCCCcCCHHHHHHHHHHccCC
Q 010107 359 SYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVVTDLQETKDALVKASDL 437 (518)
Q Consensus 359 ~~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~-~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as~l 437 (518)
..-+.+.++ .+.++. +.|.|+....|+.+.+.... ..........++++||||.-+|-... +...
T Consensus 60 -----~~~~~~~~~-~~~i~~--~~g~T~~~~aL~~a~~~~~~~~~g~r~~~~~~iillTDG~~~~~~~~------~~~~ 125 (179)
T 1mjn_A 60 -----VKRKDPDAL-LKHVKH--MLLLTNTFGAINYVATEVFREELGARPDATKVLIIITDGEATDSGNI------DAAK 125 (179)
T ss_dssp -----HHHCCHHHH-HTTCCC--CCBCCCHHHHHHHHHHHTSSGGGTCCTTSEEEEEEEESSCCSSCSCC------GGGT
T ss_pred -----CCHHHHHHH-HHhccc--CCCCChHHHHHHHHHHHhcccccCCCCCCCeEEEEEcCCCCCCCcch------HHHC
Confidence 000111111 122333 36889999999988753211 11112345789999999987664321 1234
Q ss_pred CeEEEEEecCCCcc-----hhhhhcc
Q 010107 438 PLSILIIGVGGADF-----KEMEILD 458 (518)
Q Consensus 438 PlsiiiVGvG~~~f-----~~m~~ld 458 (518)
.+-|.-||||+..- ..|+.+-
T Consensus 126 ~i~i~~igvG~~~~~~~~~~~L~~iA 151 (179)
T 1mjn_A 126 DIIRYIIGIGKHFQTKESQETLHKFA 151 (179)
T ss_dssp TSEEEEEEESGGGCSHHHHHTTGGGS
T ss_pred CCEEEEEEccccccccccHHHHHHHh
Confidence 57788899998532 5555554
No 120
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=97.36 E-value=0.0015 Score=55.69 Aligned_cols=70 Identities=20% Similarity=0.211 Sum_probs=50.5
Q ss_pred CCCcEEEEEEEecCCceeeEeee-ccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecCCCCCcceEEEEEechhhh
Q 010107 152 RNDPFLVISKIVESGTHIPVCKT-EVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLE 229 (518)
Q Consensus 152 ~sDPyv~i~~~~~~~~~~~~~kT-evik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~ 229 (518)
..||||.+..... ......+| ...++|..|.|++ |...+. ..+.|.|.|+.-. .+|+..|++.+++|.
T Consensus 26 ~lDPy~aV~vdE~--~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~----~Gr~l~i~Vfh~a----~~fvAn~tV~~edL~ 95 (126)
T 1yrk_A 26 ANQPFCAVKMKEA--LSTERGKTLVQKKPTMYPEWKSTFDAHIY----EGRVIQIVLMRAA----EEPVSEVTVGVSVLA 95 (126)
T ss_dssp SCCCEEEEEEEEE--EEETTEEEEECCSCCBCCCTTCEEEEECC----TTCEEEEEEEEET----TEEEEEEEEEHHHHH
T ss_pred cCCceEEEEeeee--EEcccceeecccCCCCCcCccceEEeeee----CCEEEEEEEEcCC----CCeeeEEEEEHHHHH
Confidence 5799999987521 00112355 7778899999999 543332 3689999999533 299999999999998
Q ss_pred hc
Q 010107 230 KL 231 (518)
Q Consensus 230 ~~ 231 (518)
..
T Consensus 96 ~~ 97 (126)
T 1yrk_A 96 ER 97 (126)
T ss_dssp HH
T ss_pred hh
Confidence 53
No 121
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=97.34 E-value=0.00038 Score=81.07 Aligned_cols=150 Identities=22% Similarity=0.277 Sum_probs=101.9
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCC-CCcceeeecccCCCCCceeEEecCCCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSD-KRFPAWGFGARPIDGPVSHCFNLNGSN 358 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d-~~~~~~gFG~~~~~~~~~~~f~l~~~~ 358 (518)
.+.+++.||-|+| |. ...++++...+..++..++.+ -++-+..|+.. +...|+|+.-.
T Consensus 130 ~~DIvfvlD~SgS------------m~----~~~f~~~k~fv~~lv~~~~~~~~rVglV~Fs~~-----~~~~~~lt~~~ 188 (1095)
T 3k6s_A 130 EQDIVFLIDGSGS------------IS----SRNFATMMNFVRAVISQFQRPSTQFSLMQFSNK-----FQTHFTFEEFR 188 (1095)
T ss_dssp CEEEEEEEECCTT------------SC----SHHHHHHHHHHHHHHHSSCSSSEEEEEEEESSS-----EEEEECSHHHH
T ss_pred CccEEEEEcCCCC------------CC----hhHHHHHHHHHHHHHHhccccccEEEEEEECCe-----EEEEecCcccC
Confidence 5899999999997 54 356888888888888888865 57888888875 33456664200
Q ss_pred CCCcccChHHHHHHHHhhhccc-eecCCCChHHHHHHHHHHHHh-hhcccCCceEEEEEEeCCCc-CCHHHHHHHHHHcc
Q 010107 359 SYCEVEGIPGIMMAYTSALHNV-NLAGPTLFGPVISNAALIAGQ-SLANHGQKYFVLLIITDGVV-TDLQETKDALVKAS 435 (518)
Q Consensus 359 ~~~~~~g~~~i~~~Y~~~~~~~-~~~gpt~f~pvi~~~~~~a~~-~~~~~~~~y~vlliltdG~i-~d~~~t~~~i~~as 435 (518)
.... + .+.+..+ .+.|.|+.+..|+.|.+.... ........--++++||||.. +|.....+++.+|.
T Consensus 189 ~~~~------l----~~ai~~i~~~gG~T~~g~AL~~a~~~lf~~~~g~R~~~~kviIllTDG~~~~d~~~~~~~a~~~r 258 (1095)
T 3k6s_A 189 RSSN------P----LSLLASVHQLQGFTYTATAIQNVVHRLFHASYGARRDAAKILIVITDGKKEGDSLDYKDVIPMAD 258 (1095)
T ss_dssp SCSC------G----GGGTTTCCCCCSCBCHHHHHHHHHTTTTSTTTTCCSSSEEEEEEEESSCCBSCSSCHHHHHHHHH
T ss_pred CHHH------H----HHHHhhhhcccCCChHHHHHHHHHHhhccccccCCCCCCeEEEEEeCCCcCCCchhHHHHHHHHH
Confidence 1111 1 1233333 457889999999888664321 11112345679999999998 56555556666666
Q ss_pred CCCeEEEEEecCCC-----cchhhhhcccC
Q 010107 436 DLPLSILIIGVGGA-----DFKEMEILDAD 460 (518)
Q Consensus 436 ~lPlsiiiVGvG~~-----~f~~m~~ld~d 460 (518)
..-+.|..||||++ +...|+.+-++
T Consensus 259 ~~GI~i~aIGVG~~~~~~~d~~eL~~IAs~ 288 (1095)
T 3k6s_A 259 AAGIIRYAIGVGLAFQNRNSWKELNDIASK 288 (1095)
T ss_dssp HHCEEECCEEBSSGGGSTTSSHHHHTTSCS
T ss_pred HCCCEEEEEecccccccccCHHHHHHHHcC
Confidence 66888999999997 77777777743
No 122
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=97.24 E-value=0.0015 Score=56.56 Aligned_cols=70 Identities=19% Similarity=0.167 Sum_probs=50.5
Q ss_pred CCCcEEEEEEEecCCceeeEeee-ccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecCCCCCcceEEEEEechhhh
Q 010107 152 RNDPFLVISKIVESGTHIPVCKT-EVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSNGKHDLIGKVQKSLADLE 229 (518)
Q Consensus 152 ~sDPyv~i~~~~~~~~~~~~~kT-evik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~~~~~d~IG~~~i~l~~L~ 229 (518)
..||||.+..... ......+| ...++|..|.|++ |...+. ..+.|.|.|++ +. .+|+..|++.+++|.
T Consensus 31 ~lDPY~aV~VdE~--~~te~gqtl~~KkkT~~P~Wne~Fd~~V~----~Gr~l~i~Vfh-~a---~~fVAn~tV~~edL~ 100 (138)
T 2enj_A 31 AVNPYCAVLVKEY--VESENGQMYIQKKPTMYPPWDSTFDAHIN----KGRVMQIIVKG-KN---VDLISETTVELYSLA 100 (138)
T ss_dssp CCCCEEEEEEEEE--EEETTEEEEEEEEEEECCCSSSEEEECCC----SSCEEEEEEEC-SS---CSCCEEEEEESHHHH
T ss_pred cCCceEEEEeeee--eeccCceeecccCCCCCccccceEeeeEE----CCeEEEEEEEc-CC---CCeeeEEEEEHHHHH
Confidence 5799999987521 01113667 6677899999999 543332 36899999994 22 299999999999998
Q ss_pred hc
Q 010107 230 KL 231 (518)
Q Consensus 230 ~~ 231 (518)
..
T Consensus 101 ~~ 102 (138)
T 2enj_A 101 ER 102 (138)
T ss_dssp HH
T ss_pred hh
Confidence 53
No 123
>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=96.21 E-value=0.025 Score=61.13 Aligned_cols=153 Identities=11% Similarity=0.091 Sum_probs=97.1
Q ss_pred cCceeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcc---cccCCCCcceeeecccCCCCC------
Q 010107 277 GGFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQ---VYDSDKRFPAWGFGARPIDGP------ 347 (518)
Q Consensus 277 ~g~~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~---~yd~d~~~~~~gFG~~~~~~~------ 347 (518)
+|-+-.++++||.|.| ++..+.. .++..+.|...+..+++ ...+.-++-++.||+.....+
T Consensus 4 ~~~ke~iv~~iDvS~S---------M~~~d~~-~~srl~~ak~~i~~~i~~ki~~~~~D~vGlv~f~~~~~~~plt~d~~ 73 (565)
T 1jey_B 4 SGNKAAVVLCMDVGFT---------MSNSIPG-IESPFEQAKKVITMFVQRQVFAENKDEIALVLFGTDGTDNPLSGGDQ 73 (565)
T ss_dssp --CCEEEEEEEECCGG---------GGCCBTT-BCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCTTTC
T ss_pred CCCceEEEEEEECChH---------hcccCCC-CCCcHHHHHHHHHHHHHHHhcCCCCCEEEEEEEccCCCCCccccccC
Confidence 4555789999999996 3322222 46899999999998888 355666799999998732111
Q ss_pred ceeEEecCCCCCCCcccChHHHHHHHHhhhccceec-CCCChHHHHHHHHHHHHhhhcccCCce--EEEEEEeCCCcC-C
Q 010107 348 VSHCFNLNGSNSYCEVEGIPGIMMAYTSALHNVNLA-GPTLFGPVISNAALIAGQSLANHGQKY--FVLLIITDGVVT-D 423 (518)
Q Consensus 348 ~~~~f~l~~~~~~~~~~g~~~i~~~Y~~~~~~~~~~-gpt~f~pvi~~~~~~a~~~~~~~~~~y--~vlliltdG~i~-d 423 (518)
..|++.+.. ...+. ..+++...+ .+..+ +.|.+...|.-|.+..+... ...++ -.+++||||+-. +
T Consensus 74 y~~i~vl~~-l~~~~----~~~l~~l~~---~l~~~~~~t~i~~al~~A~~~l~~~~--~~~k~~~krIiLlTDg~~~~~ 143 (565)
T 1jey_B 74 YQNITVHRH-LMLPD----FDLLEDIES---KIQPGSQQADFLDALIVSMDVIQHET--IGKKFEKRHIEIFTDLSSRFS 143 (565)
T ss_dssp STTEEEEEE-EECCC----HHHHHHHHT---TCCCCSSCCCHHHHHHHHHHHHHHHS--SSSCCSEEEEEEECCCCSCCC
T ss_pred CCceEEeec-CCCCC----HHHHHHHHh---hccCCCccccHHHHHHHHHHHHHHHh--hcccccccEEEEEeCCCCCCC
Confidence 113332210 00111 133333322 23444 67999999999888776542 12233 588999999753 3
Q ss_pred HHHHHHHHHHccCCCeEEE-EEecCCC
Q 010107 424 LQETKDALVKASDLPLSIL-IIGVGGA 449 (518)
Q Consensus 424 ~~~t~~~i~~as~lPlsii-iVGvG~~ 449 (518)
..+..+++..+...-+.|. +||+|..
T Consensus 144 ~~~~~~~a~~l~~~gI~i~~vig~g~~ 170 (565)
T 1jey_B 144 KSQLDIIIHSLKKCDISLQFFLPFSLG 170 (565)
T ss_dssp CTTHHHHHHHHHHTTEEEEEEESSCCC
T ss_pred HHHHHHHHHHHHhcCcEEEEEeccCCC
Confidence 3456667777778899999 8999864
No 124
>1jey_A KU70; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.1 c.62.1.3 PDB: 1jeq_A* 3rzx_B
Probab=96.10 E-value=0.029 Score=61.20 Aligned_cols=156 Identities=7% Similarity=0.041 Sum_probs=96.8
Q ss_pred eeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhccc---ccCCCCcceeeecccCCCC--CceeEEecC
Q 010107 281 LNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQV---YDSDKRFPAWGFGARPIDG--PVSHCFNLN 355 (518)
Q Consensus 281 ~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~---yd~d~~~~~~gFG~~~~~~--~~~~~f~l~ 355 (518)
=.++++||.|.| |+-.+....++..+.|++.+..+++. ..+.-++-++.||.....+ ...|+|.+.
T Consensus 36 e~ivf~IDvS~S---------M~~~d~~~~~srl~~a~~~v~~~i~~kii~~~~D~vGlVlfgt~~t~n~l~~d~i~v~~ 106 (609)
T 1jey_A 36 DSLIFLVDASKA---------MFESQSEDELTPFDMSIQCIQSVYISKIISSDRDLLAVVFYGTEKDKNSVNFKNIYVLQ 106 (609)
T ss_dssp EEEEEEEECSGG---------GGCCCSSSSCCHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCSSCBSTTCCTTEEEEE
T ss_pred eEEEEEEECCHH---------HcCCCCCCCCChHHHHHHHHHHHHHHhhCCCCCCeEEEEEEccCCCCCcCCCCCeEEEe
Confidence 348999999985 44333222478999999999998885 3444569999999874221 234555432
Q ss_pred CCCCCCcccChHHHHHHHHhhhc--------c-ceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcC-CH-
Q 010107 356 GSNSYCEVEGIPGIMMAYTSALH--------N-VNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT-DL- 424 (518)
Q Consensus 356 ~~~~~~~~~g~~~i~~~Y~~~~~--------~-~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~-d~- 424 (518)
. ...|... .++...+.+. . +.....|.+...|.-|+++-+... ....=-++++||||+-. +.
T Consensus 107 ~-L~~~~~~----~ik~l~~l~~~~~~~~~~~~~g~~~~t~l~daL~~a~~~f~~~~--~k~~~k~IiL~TDg~~p~~~~ 179 (609)
T 1jey_A 107 E-LDNPGAK----RILELDQFKGQQGQKRFQDMMGHGSDYSLSEVLWVCANLFSDVQ--FKMSHKRIMLFTNEDNPHGND 179 (609)
T ss_dssp E-EECCCHH----HHHHHHTTSHHHHHHHHHHHHCCSCCCCHHHHHHHHHHHHHTCS--SCEEEEEEEEEESCSCTTTTC
T ss_pred c-CCCCCHH----HHHHHHHHhhcccchhhhhhcCCCCCCCHHHHHHHHHHHHHhhc--hhhcCCEEEEEcCCCCCCCCc
Confidence 1 1122221 2222222211 0 112467999999998887765431 11123588999999752 21
Q ss_pred ----HHHHHHHHHccCCCeEEEEEecCCCc-ch
Q 010107 425 ----QETKDALVKASDLPLSILIIGVGGAD-FK 452 (518)
Q Consensus 425 ----~~t~~~i~~as~lPlsiiiVGvG~~~-f~ 452 (518)
.+...+...+..+-+.|.+||||..+ |.
T Consensus 180 ~~~~~~~~~~a~~l~~~gI~i~~igig~~~~fd 212 (609)
T 1jey_A 180 SAKASRARTKAGDLRDTGIFLDLMHLKKPGGFD 212 (609)
T ss_dssp HHHHHHHHHHHHHHHHHTEEEEEEEBCCTTCCC
T ss_pred hHHHHHHHHHHHHHHhcCcEEEEEecCCCCccc
Confidence 35667777778899999999999753 54
No 125
>1yvr_A RO autoantigen, 60-kDa SS-A/RO ribonucleoprotein, 60 kDa; heat repeat, VON willebrand factor A, rossmann fold, midas motif', RNA binding protein; 1.95A {Xenopus laevis} SCOP: a.118.25.1 c.62.1.5 PDB: 1yvp_A 2i91_A
Probab=95.18 E-value=0.16 Score=54.55 Aligned_cols=138 Identities=11% Similarity=0.065 Sum_probs=81.2
Q ss_pred CceeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEecCCC
Q 010107 278 GFELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGS 357 (518)
Q Consensus 278 g~~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~ 357 (518)
.....++++||.|+| +.+-+...+ -.+.++...++- +..- ....+-++.|+... ...+++.+
T Consensus 366 ~~~~~v~lvvD~SgS---------M~~~~~~~~-l~~~~~Aa~l~~-~~~~-~~d~vglv~Fs~~~------~~~~~t~~ 427 (538)
T 1yvr_A 366 PTGKRFLLAIDVSAS---------MNQRVLGSI-LNASVVAAAMCM-LVAR-TEKDSHMVAFSDEM------LPCPITVN 427 (538)
T ss_dssp CCCCCEEEEEECSGG---------GGSBSTTSS-CBHHHHHHHHHH-HHHH-HCSSEEEEEESSSE------ECCSCCTT
T ss_pred CCCceEEEEEECccc---------cCCCCCCCc-HHHHHHHHHHHH-HHhc-cCCceEEEEECCCc------eEcCCCCc
Confidence 355899999999996 322111112 233333222222 2222 23358899998631 01233221
Q ss_pred CCCCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCC----HHHHHHHHHH
Q 010107 358 NSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTD----LQETKDALVK 433 (518)
Q Consensus 358 ~~~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d----~~~t~~~i~~ 433 (518)
.++..+++.- ... ..|.|+++..|..+.+. ....-++++||||..++ ..+..+.+.+
T Consensus 428 ------~~l~~~l~~l----~~~-~~GgT~i~~aL~~a~~~--------~~~~~~iIliTDg~~~~g~~~~~~~l~~~~~ 488 (538)
T 1yvr_A 428 ------MLLHEVVEKM----SDI-TMGSTDCALPMLWAQKT--------NTAADIFIVFTDCETNVEDVHPATALKQYRE 488 (538)
T ss_dssp ------SCHHHHHHHH----TTC-CCSCCCTTHHHHHHHHT--------TCCCSEEEEEECCCCCSSSCCHHHHHHHHHH
T ss_pred ------ccHHHHHHHH----hcC-CCCCCcHHHHHHHHHhc--------cCCCCEEEEEcCCCCCCCCCCHHHHHHHHHH
Confidence 2244544432 222 57899999988877553 12346889999997643 4566666676
Q ss_pred ccCCCeEEEEEecCCCcch
Q 010107 434 ASDLPLSILIIGVGGADFK 452 (518)
Q Consensus 434 as~lPlsiiiVGvG~~~f~ 452 (518)
..+.++.+++||+|..+..
T Consensus 489 ~~~~~v~l~~igig~~~~~ 507 (538)
T 1yvr_A 489 KMGIPAKLIVCAMTSNGFS 507 (538)
T ss_dssp HHTCCCEEEEEECSSSSEE
T ss_pred HhCCCcEEEEEEecCCCCc
Confidence 6677899999999986543
No 126
>2nvo_A RO sixty-related protein, RSR; alpha helical repeats, VON willebrand factor A domain, beta- RNA binding protein; 1.89A {Deinococcus radiodurans}
Probab=94.81 E-value=0.086 Score=56.57 Aligned_cols=136 Identities=13% Similarity=0.076 Sum_probs=81.2
Q ss_pred CceeeEEEEeccccCCCCCCCCCCccccC--CCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEecC
Q 010107 278 GFELNFMVAVDFTASNGNPRLPDSLHYLD--PSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLN 355 (518)
Q Consensus 278 g~~~~~~~~iDft~sN~~~~~~~slH~~~--~~~~~n~y~~ai~~i~~i~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~ 355 (518)
-....++++||.|+| +.+.. ...+.+ ..++..+++-++..-+ | .+-++.|+... . ..+++
T Consensus 360 ~~~~~~lv~vDvSgS---------M~~~~~~~~~k~~-~~e~Aa~la~~~~r~~-d-~v~lv~Fs~~~-----~-~~~~~ 421 (535)
T 2nvo_A 360 PANTRHLLALDVSGS---------MTCGDVAGVPGLT-PNMAAAAMSLIALRTE-P-DALTMGFAEQF-----R-PLGIT 421 (535)
T ss_dssp CCCSEEEEEECCSGG---------GGSCCGGGCTTCC-HHHHHHHHHHHHHHHS-S-EEEEEEEBSSE-----E-ECCCC
T ss_pred CCCceEEEEEECCcc---------ccCCCCCCCCccc-HHHHHHHHHHHHcCcC-C-ceEEEEECCcc-----e-EcCCC
Confidence 355899999999996 32200 010245 3444445554443322 2 58899998751 0 11222
Q ss_pred CCCCCCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcC----CHHHHHHHH
Q 010107 356 GSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT----DLQETKDAL 431 (518)
Q Consensus 356 ~~~~~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~----d~~~t~~~i 431 (518)
. . .++.++++ ..-. .+.|.|+++..|+.+.+. ...+-++++||||+.+ +..+.++..
T Consensus 422 ~-----~-~~l~~~l~---~l~~--~~~ggTdi~~~l~~a~~~--------~~~~~~vIliTD~~~~~g~~~~~~al~~~ 482 (535)
T 2nvo_A 422 P-----R-DTLESAMQ---KAQS--VSFGGTDCAQPILWAAQE--------RLDVDTFVVYTDNETWAGQVHPTVALDQY 482 (535)
T ss_dssp T-----T-CCHHHHHH---HTCC--SSBCCCCTTHHHHHHHHT--------TCCCSEEEEEESSCCCCCSSCHHHHHHHH
T ss_pred c-----c-hhHHHHHH---HHhh--CCCCCccHHHHHHHHHHh--------cCCCCEEEEEeCCCccCCCCCHHHHHHHH
Confidence 1 1 33444433 3322 136899999998665321 2346789999999664 345566666
Q ss_pred HHccCCCeEEEEEecCCCc
Q 010107 432 VKASDLPLSILIIGVGGAD 450 (518)
Q Consensus 432 ~~as~lPlsiiiVGvG~~~ 450 (518)
.+..+.+.-+++||||...
T Consensus 483 r~~~~~~~klv~i~l~~~~ 501 (535)
T 2nvo_A 483 AQKMGRAPKLIVVGLTATE 501 (535)
T ss_dssp HHHHSCCCEEEEEETTCSC
T ss_pred HHhhCCCCeEEEEeccCCC
Confidence 6666779999999999864
No 127
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=80.26 E-value=6.4 Score=44.61 Aligned_cols=42 Identities=29% Similarity=0.233 Sum_probs=29.9
Q ss_pred ceecCCCChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCC
Q 010107 380 VNLAGPTLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTD 423 (518)
Q Consensus 380 ~~~~gpt~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d 423 (518)
+...|.|+...-|..|++...+.. ....--++++||||+-++
T Consensus 351 l~~~GGT~i~~AL~~A~~lL~~~~--~~~~~kvIILLTDG~pt~ 392 (893)
T 2ww8_A 351 MYQFGATFTQKALMKADEILTQQA--RQNSQKVIFHITDGVPTM 392 (893)
T ss_dssp GGGGCSCCHHHHHHHHHHHHHHHS--CSSSEEEEEEEESSCCSE
T ss_pred cccCCCChHHHHHHHHHHHHHhhc--ccCCCeEEEEEcCCCCCc
Confidence 445788999999999988765321 112345889999998653
No 128
>2iue_A Pactolus I-domain; membrane protein, CD, ITC, limbs, midas, admidas, membrane, integrin, titration, rossman fold, cell adhesion, transmembrane; NMR {Mus musculus}
Probab=76.59 E-value=7.7 Score=36.03 Aligned_cols=112 Identities=15% Similarity=0.212 Sum_probs=67.1
Q ss_pred eeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCCCceeEEecCCCCC
Q 010107 280 ELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDGPVSHCFNLNGSNS 359 (518)
Q Consensus 280 ~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d~~~~~~gFG~~~~~~~~~~~f~l~~~~~ 359 (518)
.+.+.+.+|+|.| |.+. ....++.+..|.+-++.+..+-+ +|||+= .+....|.++|+.+
T Consensus 3 pvDl~fl~D~S~S------------M~~d--i~~lk~~~~~l~~~l~~~~~~~r---~Gfg~f-~Dk~~~~~l~lT~d-- 62 (212)
T 2iue_A 3 SVDLYFLMGLSGS------------AQGH--LSNVQTLGSDLLKALNEISRSGR---IGFGSI-VNMTFQHILKLTAD-- 62 (212)
T ss_dssp CEEEEEEEECCGG------------GTTT--HHHHHHHHHHHHHHHHHHCSCEE---EEEEEE-SSSCEEEEEEEESC--
T ss_pred ceEEEEEEeCCCc------------chhH--HHHHHHHHHHHHHHHHhhCcCce---EEEEEE-EcCcceecCCcCCC--
Confidence 4789999999998 7754 56777777777777777655544 467652 11123456666543
Q ss_pred CCcccChHHHHHHHHhhhccceecC----C-CChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCH
Q 010107 360 YCEVEGIPGIMMAYTSALHNVNLAG----P-TLFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDL 424 (518)
Q Consensus 360 ~~~~~g~~~i~~~Y~~~~~~~~~~g----p-t~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~ 424 (518)
.+.+.+.+.....+| | .-|.-+++.+....+-. ..+ .-.+++++||+..+..
T Consensus 63 ----------~~~F~~~v~~~~vsg~~D~PE~g~dal~qa~~c~~~i~--Wr~-a~rllvl~TDa~~H~~ 119 (212)
T 2iue_A 63 ----------SSQFQRELRKQLVSGKLATPKGQLDAVVQVAICLGEIG--WRN-GTRFLVLVTDNDFHLA 119 (212)
T ss_dssp ----------HHHHHHHHHTCCCCCCSSSSBCHHHHHHHHHHCHHHHT--CCS-SEEEEEEECSSCBCCT
T ss_pred ----------HHHHHHHHhhccccCCCCCCchHHHHHHHHHHhhhhcc--cCC-ccEEEEEECcCCcccc
Confidence 233455556666665 4 33334443332222211 234 6789999999876543
No 129
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=70.99 E-value=3 Score=39.63 Aligned_cols=42 Identities=24% Similarity=0.312 Sum_probs=27.6
Q ss_pred ceEEEEEEeCCCcCCHHHHHHHHHHccCCCeEEEEEecCCCc
Q 010107 409 KYFVLLIITDGVVTDLQETKDALVKASDLPLSILIIGVGGAD 450 (518)
Q Consensus 409 ~y~vlliltdG~i~d~~~t~~~i~~as~lPlsiiiVGvG~~~ 450 (518)
.--++++||||+-+--..-.++...|...-+-|..||||+.+
T Consensus 9 ~~k~iillTDG~~~~g~~p~~aa~~a~~~gi~v~tIGig~~~ 50 (242)
T 3rag_A 9 TIRQILVITDGCSNIGPDPVEAARRAHRHGIVVNVIGIVGRG 50 (242)
T ss_dssp CEEEEEEEESSCCCSSSCHHHHHHHHHHTTCEEEEEEECCSS
T ss_pred CccEEEEEccCCCCCCCCHHHHHHHHHHCCCEEEEEEecCCc
Confidence 355789999998641112333344455667889999998653
No 130
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=67.39 E-value=7 Score=42.92 Aligned_cols=51 Identities=8% Similarity=0.186 Sum_probs=30.0
Q ss_pred HHHHHhhhccceecCCC-----ChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcC
Q 010107 370 MMAYTSALHNVNLAGPT-----LFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVT 422 (518)
Q Consensus 370 ~~~Y~~~~~~~~~~gpt-----~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~ 422 (518)
+.++.+.+.+...+|-- -|.-+++.|.-. ...........+||++||...+
T Consensus 200 ~~~f~~~v~~~~isgn~D~PE~g~dAl~qa~~c~--~~igWr~~a~rllv~~TDa~~H 255 (690)
T 3fcs_B 200 VTRFNEEVKKQSVSRNRDAPEGGFDAIMQATVCD--EKIGWRNDASHLLVFTTDAKTH 255 (690)
T ss_dssp HHHHHHHHTTCCCCCCSSSSBCHHHHHHHHHHCH--HHHTCCSSSEEEEEEEESSCBC
T ss_pred HHHHHHHhhceeccCCCCCCchHHHHHHHHhhcc--cccCCCCCceEEEEEECCCccc
Confidence 45667777777777642 343333332111 1122345678999999997755
No 131
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=62.87 E-value=16 Score=34.09 Aligned_cols=43 Identities=14% Similarity=0.261 Sum_probs=36.2
Q ss_pred EEEEEeeeeeeCCCCCceeeEEEEEEEeCce--eEEEEEEEEecC
Q 010107 13 LVEVGRTEVVLNSLNPTWITKHIITYQFEVV--QTLVFRIYDVDT 55 (518)
Q Consensus 13 ~~ev~rTevi~~~lNP~f~~~f~~~~~fe~~--q~L~~~VyD~D~ 55 (518)
..-..+|-|...+.+|.|.|++.+.+..+.. ..|+|.++.+..
T Consensus 75 ~~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 75 AISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp CBSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred CceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 4556788899999999999999999876644 589999998775
No 132
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=60.64 E-value=1.1e+02 Score=28.46 Aligned_cols=60 Identities=17% Similarity=0.155 Sum_probs=41.2
Q ss_pred eeeEeeeccccCCCCCceee-eEEeeeccCCCCccEEEEEEeecCC----CCCcceEEEEEechh
Q 010107 168 HIPVCKTEVLKNETKPTWKS-VFLNIQQVGSKDSPLIIECFNFNSN----GKHDLIGKVQKSLAD 227 (518)
Q Consensus 168 ~~~~~kTevik~tlnP~W~e-f~~~~~~l~~~~~~L~veV~D~d~~----~~~d~IG~~~i~l~~ 227 (518)
....++|.|...+.+|.|+| +++.+..-.....-|.|+++..... .....+|.+-++|-+
T Consensus 75 ~~se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~~ 139 (220)
T 3l4c_A 75 AISEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLMR 139 (220)
T ss_dssp CBSCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESBC
T ss_pred CceeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEccc
Confidence 35678999999999999999 5544432222356799999875432 223578888888743
No 133
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=59.85 E-value=29 Score=39.46 Aligned_cols=92 Identities=9% Similarity=0.120 Sum_probs=56.0
Q ss_pred ceEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCceee-EeeeccccCCCCCceee---eEEeeeccCCCCccEEEEEEe
Q 010107 133 TTTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHIP-VCKTEVLKNETKPTWKS---VFLNIQQVGSKDSPLIIECFN 208 (518)
Q Consensus 133 ~li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~-~~kTevik~tlnP~W~e---f~~~~~~l~~~~~~L~veV~D 208 (518)
.+.+.+.++.++... ..++-|+.+.+... ++... ...|..+.-..+|.|++ |.+.+..| +.+..|.|.+|+
T Consensus 218 ~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g-~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dL-Pr~a~L~~ti~~ 292 (940)
T 2wxf_A 218 PFSIELIEGRKVNAD---ERMKLVVQAGLFHG-NEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDL-PRMARLCFALYA 292 (940)
T ss_dssp EEEEEEEEEECCCC------CEEEEEEEEEET-TEESSCCEECCCEESCSSCEEEEEEEEEEEGGGC-CTTCEEEEEEEE
T ss_pred ceEEEEEEecccCCC---CCceEEEEEEEEEC-CEEccCceecccccCCCCcccceEEEcccccccC-CcccEEEEEEEE
Confidence 344455677777543 34677888877642 33321 23344455567899999 44445554 457889999999
Q ss_pred ecCC--C----------CCcceEEEEEechhhh
Q 010107 209 FNSN--G----------KHDLIGKVQKSLADLE 229 (518)
Q Consensus 209 ~d~~--~----------~~d~IG~~~i~l~~L~ 229 (518)
.... + .+..||.+.+++-+-.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 325 (940)
T 2wxf_A 293 VVEKAKKARSTKKKSKKADCPIAWANLMLFDYK 325 (940)
T ss_dssp EC----------------CEEEEEEEEESBCTT
T ss_pred ecCCccCccccccccccccceEEEEeeeEECCc
Confidence 7432 2 2458999999987654
No 134
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=55.72 E-value=49 Score=38.08 Aligned_cols=93 Identities=12% Similarity=0.201 Sum_probs=55.0
Q ss_pred ceEEE-EEeecCCCcCCCCCCCCcEEEEEEEecCCceee-EeeeccccCCCCCceee---eEEeeeccCCCCccEEEEEE
Q 010107 133 TTTEL-ILRCSDLDCKDLFSRNDPFLVISKIVESGTHIP-VCKTEVLKNETKPTWKS---VFLNIQQVGSKDSPLIIECF 207 (518)
Q Consensus 133 ~li~~-~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~~-~~kTevik~tlnP~W~e---f~~~~~~l~~~~~~L~veV~ 207 (518)
....+ ++++.++. .+....++-||++.+.. +++... ..+|..+. ..+|.||+ |.+.+..| +....|-|.||
T Consensus 355 ~~f~v~i~~~~~~n-~~~~~~~~~~V~~~l~h-G~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dL-Pr~arL~~tl~ 430 (1091)
T 3hhm_A 355 SALRIKILCATYVN-VNIRDIDKIYVRTGIYH-GGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDL-PRAARLCLSIC 430 (1091)
T ss_dssp SEEEEEEEEESCCC-CCCSSCCCCCEEEEEES-SSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGC-CTTCEEEEEEC
T ss_pred CCEEEEEEEecCCC-CCccccceEEEEEEEEE-CCEEccCceeccccC-CCCCCCCeeEEecCccccC-ChhcEEEEEEE
Confidence 34444 45555553 23223456799988874 233321 23343333 45788998 55555555 45788999999
Q ss_pred eecCC----CCCcceEEEEEechhhh
Q 010107 208 NFNSN----GKHDLIGKVQKSLADLE 229 (518)
Q Consensus 208 D~d~~----~~~d~IG~~~i~l~~L~ 229 (518)
+.... +.+..||.+.++|-+-.
T Consensus 431 ~~~~~~~~~~~~~~lg~~n~~lfd~~ 456 (1091)
T 3hhm_A 431 SVKGRKGAKEEHCPLAWGNINLFDYT 456 (1091)
T ss_dssp CCCCCC-------CCEEEEEESBCTT
T ss_pred EecCccCcccccceeEEeeeeeEccC
Confidence 97642 23468999999987764
No 135
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=52.96 E-value=54 Score=37.32 Aligned_cols=76 Identities=14% Similarity=0.107 Sum_probs=48.7
Q ss_pred CCCcEEEEEEEecCCceeeEeeeccccCCCCCceee---eEEeeeccCCCCccEEEEEEeecCCC---------------
Q 010107 152 RNDPFLVISKIVESGTHIPVCKTEVLKNETKPTWKS---VFLNIQQVGSKDSPLIIECFNFNSNG--------------- 213 (518)
Q Consensus 152 ~sDPyv~i~~~~~~~~~~~~~kTevik~tlnP~W~e---f~~~~~~l~~~~~~L~veV~D~d~~~--------------- 213 (518)
.++-|+++.+.. +++....-+|..+.-+-+|.||+ |.+.+..| +.+..|.|.+|+....+
T Consensus 237 ~~~~~V~~~l~~-G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dL-Pr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~ 314 (961)
T 1e7u_A 237 DLTVFVEANIQY-GQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDL-PKGALLNLQIYCGAKPALSGKTSAEMPSPESK 314 (961)
T ss_dssp CEEEEEEEEEEE-TTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGC-CTTCEEEEEEEEEEC-----------------
T ss_pred CceEEEEEEEEE-CCEEcccceeeccccCCCcccceeEEeccccccC-CcccEEEEEEEecccCcccccccccccccccc
Confidence 456788877664 34444444555555566799999 44455554 45788999999865322
Q ss_pred -CCcceEEEEEechhhh
Q 010107 214 -KHDLIGKVQKSLADLE 229 (518)
Q Consensus 214 -~~d~IG~~~i~l~~L~ 229 (518)
++..||.+.++|-+-.
T Consensus 315 ~~~~~lg~~n~~lfd~~ 331 (961)
T 1e7u_A 315 GKAQLLYYVNLLLIDHR 331 (961)
T ss_dssp ---CEEEEEEEESBCTT
T ss_pred ccceeEEEEeeeeecCC
Confidence 3458999998887664
No 136
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=47.10 E-value=9.5 Score=41.83 Aligned_cols=16 Identities=19% Similarity=0.509 Sum_probs=13.4
Q ss_pred cCceeeEEEEeccccC
Q 010107 277 GGFELNFMVAVDFTAS 292 (518)
Q Consensus 277 ~g~~~~~~~~iDft~s 292 (518)
.+.-+.|.+-+|.|.|
T Consensus 101 ~~ypvDly~LmD~S~S 116 (687)
T 3k6s_B 101 KGYPIDLYYLMDLSYS 116 (687)
T ss_dssp CCCCCEEEEEEECSST
T ss_pred CCCceeEEEEEcCCcc
Confidence 3556999999999997
No 137
>3rag_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tructural genomics; 1.80A {Alicyclobacillus acidocaldarius subsp}
Probab=45.91 E-value=58 Score=30.68 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=64.6
Q ss_pred hhhhhcccC---ceeeEEEEeccccCCCCCCCCCCccccCCCCCCCHHHHHHHHHhhhcccccCCCCcceeeecccCCCC
Q 010107 270 TFLDYLAGG---FELNFMVAVDFTASNGNPRLPDSLHYLDPSGRPNAYQRAILEVGEVLQVYDSDKRFPAWGFGARPIDG 346 (518)
Q Consensus 270 sFldyi~~g---~~~~~~~~iDft~sN~~~~~~~slH~~~~~~~~n~y~~ai~~i~~i~~~yd~d~~~~~~gFG~~~~~~ 346 (518)
..++|+-.. ..+.+++.||-|+| |.+ +......|+..+..-+..+-..-++.++.|++++..-
T Consensus 121 ~~~~~~~~l~e~~~~~vvfLVDtSgS------------M~~--kl~~vk~al~~Ll~sl~~~~~~~~VavV~F~~~~~~~ 186 (242)
T 3rag_A 121 RVMQVVEKLEDEVALHLVVCLDTSAS------------MRD--KIPTVREAVRDLALSLKVRSGPLAVSVIAFPGKGEEA 186 (242)
T ss_dssp HHHHHHHHHHHHSCEEEEEEEECSGG------------GTT--THHHHHHHHHHHHHHHTTSSSCEEEEEEEESCSTTCS
T ss_pred chhhhhhhhcccCCCCEEEEEECccc------------HHH--HHHHHHHHHHHHHHHHhccCCCcEEEEEEECCCCccc
Confidence 356676553 34999999999998 652 3455555555554444444345679999999873211
Q ss_pred Cce-eEEecCCCCCCCcccChHHHHHHHHhhhccceecCCCChHHHHHHHHHHHHh
Q 010107 347 PVS-HCFNLNGSNSYCEVEGIPGIMMAYTSALHNVNLAGPTLFGPVISNAALIAGQ 401 (518)
Q Consensus 347 ~~~-~~f~l~~~~~~~~~~g~~~i~~~Y~~~~~~~~~~gpt~f~pvi~~~~~~a~~ 401 (518)
... +-|. . . . - -.+.++.+...|-|..++.|..|.++.++
T Consensus 187 ~~ll~pfT--~----~-~-~-------~~~~l~~L~agG~Tplg~AL~~A~~~~~~ 227 (242)
T 3rag_A 187 TRLVQPFS--S----E-V-N-------VAALEAELVARGGTPTGPAIDHAADLLLS 227 (242)
T ss_dssp CEEEEEEE--S----S-C-C-------HHHHHHHCCCCSCCCHHHHHHHHHHHHHH
T ss_pred eeecCCCC--C----h-H-H-------HHHHHhhCCCCCCCcHHHHHHHHHHHHHH
Confidence 111 1232 1 1 0 1 12445566779999999999999887653
No 138
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=30.07 E-value=59 Score=33.76 Aligned_cols=50 Identities=10% Similarity=0.288 Sum_probs=27.8
Q ss_pred HHHHHhhhccceecC----CC-ChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCc
Q 010107 370 MMAYTSALHNVNLAG----PT-LFGPVISNAALIAGQSLANHGQKYFVLLIITDGVV 421 (518)
Q Consensus 370 ~~~Y~~~~~~~~~~g----pt-~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i 421 (518)
.+.+.+.+.+...+| |- -|.-+++.|. +.+........-.+|+++||...
T Consensus 200 ~~~F~~~V~~~~iSGn~D~PEgg~dAl~qaav--C~~~igWR~~a~rllV~~TDa~~ 254 (472)
T 3t3p_B 200 VTRFNEEVKKQSVSRNRDAPEGGFDAIMQATV--CDEKIGWRNDASHLLVFTTDAKT 254 (472)
T ss_dssp HHHHHHHHHHCCCCCCSSSSBCHHHHHHHHHH--CHHHHTCCSSSEEEEEEEESSCB
T ss_pred HHHHHHHHhhccccCCCCCCchHHHHHHHHhc--chhhcCCCCCceEEEEEECCCCc
Confidence 455667777777766 32 3444443332 11222234456789999999654
No 139
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=26.88 E-value=48 Score=38.23 Aligned_cols=91 Identities=9% Similarity=0.141 Sum_probs=51.8
Q ss_pred eEEEEEeecCCCcCCCCCCCCcEEEEEEEecCCcee-eEeeeccccCCCCCceee---eEEeeeccCCCCccEEEEEEee
Q 010107 134 TTELILRCSDLDCKDLFSRNDPFLVISKIVESGTHI-PVCKTEVLKNETKPTWKS---VFLNIQQVGSKDSPLIIECFNF 209 (518)
Q Consensus 134 li~~~i~a~~L~~~d~~g~sDPyv~i~~~~~~~~~~-~~~kTevik~tlnP~W~e---f~~~~~~l~~~~~~L~veV~D~ 209 (518)
+.+.+.++.++... ..++-|+.+.+... ++.. .-.+|..+.-..+|.||+ |.+.+..| +.+..|.|.+|+.
T Consensus 355 f~i~i~~~~~~~~~---~~~~~~V~~~l~~g-~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dL-Pr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 355 FQITLVKGNKLNTE---ETVKVHVRAGLFHG-TELLCKTVVSSEISGKNDHIWNEQLEFDINICDL-PRMARLCFAVYAV 429 (1092)
T ss_dssp EEEEECCCCCCCCC---SSCCCCCBCCEEET-TEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSC-CTTCEEEEECCCC
T ss_pred EEEEEEEeccCCCC---CCceEEEEEEEEEC-CEEccCceecccccCCCCCccceeEEeCCccccC-ChhcEEEEEEEEe
Confidence 33444566666532 34677877666532 3222 123355555567899999 44444444 4578899999996
Q ss_pred cCC----------------------CCCcceEEEEEechhhh
Q 010107 210 NSN----------------------GKHDLIGKVQKSLADLE 229 (518)
Q Consensus 210 d~~----------------------~~~d~IG~~~i~l~~L~ 229 (518)
... +.+..||.+.+++-+-.
T Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd~~ 471 (1092)
T 2y3a_A 430 LDKVKTKKSTKTINPSKYQTIRKAGKVHYPVAWVNTMVFDFK 471 (1092)
T ss_dssp ------------------------------CCEEEEESBCTT
T ss_pred cCccccccccccccccccccccccccccceeEEEeeeeECCc
Confidence 311 11348899988876654
No 140
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=24.75 E-value=89 Score=27.32 Aligned_cols=59 Identities=14% Similarity=0.201 Sum_probs=43.4
Q ss_pred EeeeeeeCCCCCceeeEEEEEEEeCc-------eeEEEEEEEEecCCcccccccccCccCcceeEEEEEeccccccccc
Q 010107 17 GRTEVVLNSLNPTWITKHIITYQFEV-------VQTLVFRIYDVDTQFHNVDVKTLKLVEQQFLGEATCTLSQIVTRKN 88 (518)
Q Consensus 17 ~rTevi~~~lNP~f~~~f~~~~~fe~-------~q~L~~~VyD~D~~~~~~~~~~~~l~~~d~iG~~~~~L~~l~~~~~ 88 (518)
.-|-+++ .++|.|+.+-++.+..+. ...|+++++...+. ....||.+.++|.+++...+
T Consensus 56 q~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g~------------~~~tla~~~I~l~~lLe~~~ 121 (156)
T 2yrb_A 56 QTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYST------------EYETIAACQLKFHEILEKSG 121 (156)
T ss_dssp EECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSS------------CEEEEEEEEECCSHHHHCCS
T ss_pred eeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeCC------------CceEEEEEEEEhHHhhCcCC
Confidence 3454444 899999987776654221 23799999987752 57899999999999996654
No 141
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=23.87 E-value=2.6e+02 Score=25.55 Aligned_cols=92 Identities=14% Similarity=0.074 Sum_probs=50.5
Q ss_pred ChHHHHHHHHHHHHhhhcccCCceEEEEEEeCCCcCCHHHHHHHHHHccCCCeEEEEEecCCCcc-hhhhhcccCCCccc
Q 010107 387 LFGPVISNAALIAGQSLANHGQKYFVLLIITDGVVTDLQETKDALVKASDLPLSILIIGVGGADF-KEMEILDADKGERL 465 (518)
Q Consensus 387 ~f~pvi~~~~~~a~~~~~~~~~~y~vlliltdG~i~d~~~t~~~i~~as~lPlsiiiVGvG~~~f-~~m~~ld~d~~~~l 465 (518)
.|..+++-+.+.|++ ..|.+++.-++++.....+.++.++. .-+=.||+.+...... ..++.+... |.++
T Consensus 22 ~~~~~~~gi~~~a~~------~g~~~~~~~~~~~~~~~~~~~~~l~~--~~vdgiI~~~~~~~~~~~~~~~~~~~-~iPv 92 (293)
T 3l6u_A 22 FAQRLINAFKAEAKA------NKYEALVATSQNSRISEREQILEFVH--LKVDAIFITTLDDVYIGSAIEEAKKA-GIPV 92 (293)
T ss_dssp HHHHHHHHHHHHHHH------TTCEEEEEECSSCHHHHHHHHHHHHH--TTCSEEEEECSCTTTTHHHHHHHHHT-TCCE
T ss_pred HHHHHHHHHHHHHHH------cCCEEEEECCCCCHHHHHHHHHHHHH--cCCCEEEEecCChHHHHHHHHHHHHc-CCCE
Confidence 345555555555553 35888877777655444455555543 4466777777765544 445666532 2554
Q ss_pred ccCCCCcccCceeeeeeCcccC
Q 010107 466 ESSTGRVASRDIVQFVPLKDVQ 487 (518)
Q Consensus 466 ~~~~g~~~~rD~v~Fv~~~~~~ 487 (518)
+.-.......+.+.+|..+++.
T Consensus 93 V~~~~~~~~~~~~~~V~~D~~~ 114 (293)
T 3l6u_A 93 FAIDRMIRSDAVVSSITSNNQM 114 (293)
T ss_dssp EEESSCCCCTTCSEEEEECHHH
T ss_pred EEecCCCCCCcceeEEecCHHH
Confidence 4322222222456777766665
Done!