Query 010112
Match_columns 518
No_of_seqs 418 out of 1412
Neff 11.0
Searched_HMMs 46136
Date Thu Mar 28 21:11:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010112.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010112hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00887 2A0109 phosphate:H+ 100.0 6.2E-46 1.3E-50 371.8 42.7 495 11-517 4-502 (502)
2 KOG0252 Inorganic phosphate tr 100.0 7.5E-47 1.6E-51 343.0 28.3 475 18-517 36-511 (538)
3 TIGR01299 synapt_SV2 synaptic 100.0 1.7E-42 3.7E-47 350.7 39.7 451 12-511 156-741 (742)
4 KOG0569 Permease of the major 100.0 8.6E-42 1.9E-46 324.2 30.7 442 23-516 11-467 (485)
5 PRK10077 xylE D-xylose transpo 100.0 8.8E-40 1.9E-44 327.4 37.7 456 17-516 6-470 (479)
6 COG2271 UhpC Sugar phosphate p 100.0 9.9E-41 2.1E-45 302.1 27.4 405 14-501 20-431 (448)
7 TIGR02332 HpaX 4-hydroxyphenyl 100.0 2.7E-38 6E-43 308.2 33.4 402 19-493 4-410 (412)
8 PRK10642 proline/glycine betai 100.0 5E-38 1.1E-42 313.5 35.7 415 22-511 15-437 (490)
9 PRK09556 uhpT sugar phosphate 100.0 1.8E-38 3.9E-43 315.2 28.4 428 7-503 13-448 (467)
10 TIGR00879 SP MFS transporter, 100.0 2.1E-37 4.5E-42 310.9 34.5 440 20-513 25-480 (481)
11 PRK11663 regulatory protein Uh 100.0 5.9E-37 1.3E-41 301.4 33.4 409 16-509 16-430 (434)
12 PRK11551 putative 3-hydroxyphe 100.0 2.6E-36 5.6E-41 295.6 35.0 387 16-503 8-395 (406)
13 TIGR00898 2A0119 cation transp 100.0 5.6E-37 1.2E-41 308.8 29.2 384 44-513 110-504 (505)
14 PRK09952 shikimate transporter 100.0 4.6E-36 1E-40 295.0 34.9 408 20-507 19-436 (438)
15 PRK10406 alpha-ketoglutarate t 100.0 6E-36 1.3E-40 294.3 35.3 422 1-510 1-429 (432)
16 PRK12307 putative sialic acid 100.0 9.9E-36 2.1E-40 293.5 33.2 370 18-465 13-382 (426)
17 COG2814 AraJ Arabinose efflux 100.0 2.3E-35 4.9E-40 271.9 32.9 377 19-505 9-387 (394)
18 KOG0253 Synaptic vesicle trans 100.0 1.4E-34 3.1E-39 255.1 36.3 434 9-511 64-527 (528)
19 TIGR00891 2A0112 putative sial 100.0 2.8E-35 6.2E-40 288.7 34.3 384 17-466 6-390 (405)
20 KOG0254 Predicted transporter 100.0 3.6E-35 7.8E-40 293.9 33.0 434 20-516 42-496 (513)
21 PF00083 Sugar_tr: Sugar (and 100.0 2.2E-41 4.8E-46 336.1 -14.8 434 28-517 5-450 (451)
22 PRK03545 putative arabinose tr 100.0 2.8E-34 6E-39 279.3 35.2 373 21-505 7-381 (390)
23 TIGR00903 2A0129 major facilit 100.0 1.5E-34 3.2E-39 275.9 31.9 359 35-505 3-366 (368)
24 PRK11273 glpT sn-glycerol-3-ph 100.0 1.8E-34 3.8E-39 285.4 33.6 415 17-513 23-444 (452)
25 PRK09705 cynX putative cyanate 100.0 6.3E-34 1.4E-38 276.2 34.3 379 21-511 8-389 (393)
26 TIGR00895 2A0115 benzoate tran 100.0 4.4E-34 9.6E-39 279.6 33.5 390 13-463 7-397 (398)
27 PRK15075 citrate-proton sympor 100.0 1.6E-33 3.5E-38 277.2 33.1 371 22-467 14-395 (434)
28 PRK14995 methyl viologen resis 100.0 3.6E-33 7.9E-38 278.7 34.2 381 21-465 4-412 (495)
29 TIGR00894 2A0114euk Na(+)-depe 100.0 1.1E-33 2.3E-38 281.7 29.9 422 17-512 13-458 (465)
30 PRK03893 putative sialic acid 100.0 1.7E-33 3.7E-38 283.1 31.2 407 17-495 14-444 (496)
31 PRK05122 major facilitator sup 100.0 4.4E-33 9.4E-38 272.1 33.0 379 25-513 17-398 (399)
32 TIGR00893 2A0114 d-galactonate 100.0 2E-33 4.4E-38 274.8 29.0 387 32-501 3-396 (399)
33 PRK03699 putative transporter; 100.0 5.4E-33 1.2E-37 270.3 31.1 376 20-504 4-380 (394)
34 TIGR00890 2A0111 Oxalate/Forma 100.0 1.1E-33 2.4E-38 274.7 25.8 358 38-498 18-376 (377)
35 PLN00028 nitrate transmembrane 100.0 3E-32 6.6E-37 270.2 32.5 398 13-503 26-432 (476)
36 PRK10489 enterobactin exporter 100.0 2.9E-32 6.4E-37 267.5 31.6 381 32-517 26-413 (417)
37 PRK15034 nitrate/nitrite trans 100.0 1.7E-31 3.7E-36 255.8 34.8 390 20-503 31-453 (462)
38 TIGR00712 glpT glycerol-3-phos 100.0 3.6E-32 7.7E-37 268.1 30.3 407 20-507 24-437 (438)
39 PRK10091 MFS transport protein 100.0 8.6E-32 1.9E-36 260.7 32.1 368 25-502 5-374 (382)
40 COG2223 NarK Nitrate/nitrite t 100.0 1.5E-31 3.3E-36 243.2 31.3 393 16-504 7-401 (417)
41 PRK10213 nepI ribonucleoside t 100.0 4.2E-31 9.1E-36 256.2 34.5 366 21-499 18-386 (394)
42 PRK12382 putative transporter; 100.0 1.4E-31 3E-36 260.7 31.0 365 27-502 19-387 (392)
43 PRK10504 putative transporter; 100.0 3.1E-31 6.7E-36 264.7 34.1 382 25-469 12-418 (471)
44 TIGR00892 2A0113 monocarboxyla 100.0 3.6E-32 7.8E-37 268.4 25.5 400 16-500 12-417 (455)
45 PRK15402 multidrug efflux syst 100.0 3.8E-30 8.3E-35 251.7 35.1 360 18-465 8-369 (406)
46 TIGR00881 2A0104 phosphoglycer 100.0 9.8E-32 2.1E-36 261.2 22.8 364 30-465 2-371 (379)
47 KOG2532 Permease of the major 100.0 1.2E-30 2.5E-35 251.9 29.1 371 60-503 65-446 (466)
48 PRK03633 putative MFS family t 100.0 2.9E-30 6.3E-35 250.1 31.9 363 25-503 8-371 (381)
49 TIGR00711 efflux_EmrB drug res 100.0 8.2E-31 1.8E-35 263.2 29.0 377 24-465 3-409 (485)
50 TIGR00900 2A0121 H+ Antiporter 100.0 2E-30 4.3E-35 250.6 29.8 349 29-465 5-362 (365)
51 PRK09874 drug efflux system pr 100.0 7.5E-30 1.6E-34 250.4 33.0 373 27-502 18-396 (408)
52 cd06174 MFS The Major Facilita 100.0 7.9E-30 1.7E-34 245.1 32.0 346 27-502 3-350 (352)
53 TIGR00883 2A0106 metabolite-pr 100.0 2.5E-30 5.3E-35 252.7 28.4 364 32-466 2-375 (394)
54 TIGR00710 efflux_Bcr_CflA drug 100.0 1.2E-29 2.6E-34 247.0 33.1 348 27-463 9-358 (385)
55 TIGR00897 2A0118 polyol permea 100.0 3.2E-29 7E-34 244.3 33.0 360 44-503 34-400 (402)
56 TIGR00899 2A0120 sugar efflux 100.0 2.9E-29 6.3E-34 243.4 31.3 365 30-504 4-374 (375)
57 KOG1330 Sugar transporter/spin 100.0 1.8E-31 4E-36 244.4 13.9 373 18-468 28-414 (493)
58 KOG0255 Synaptic vesicle trans 100.0 2.8E-29 6.1E-34 253.2 31.2 376 64-513 114-502 (521)
59 PRK11195 lysophospholipid tran 100.0 8E-29 1.7E-33 240.1 31.6 367 29-501 9-377 (393)
60 PF07690 MFS_1: Major Facilita 100.0 5.8E-30 1.2E-34 246.1 23.2 347 29-457 2-352 (352)
61 KOG2533 Permease of the major 100.0 7.1E-30 1.5E-34 246.8 23.4 307 20-384 42-354 (495)
62 PRK11043 putative transporter; 100.0 1.3E-28 2.8E-33 240.7 32.6 342 32-465 15-356 (401)
63 PRK11010 ampG muropeptide tran 100.0 2E-28 4.3E-33 243.3 32.9 385 25-506 14-405 (491)
64 PRK15403 multidrug efflux syst 100.0 2E-28 4.4E-33 238.7 32.4 372 28-501 21-394 (413)
65 PRK10133 L-fucose transporter; 100.0 1.8E-28 3.9E-33 240.2 31.8 393 21-499 24-428 (438)
66 PRK10473 multidrug efflux syst 100.0 2.9E-28 6.4E-33 237.3 32.8 337 30-465 10-348 (392)
67 PRK11102 bicyclomycin/multidru 100.0 3.8E-28 8.3E-33 235.6 30.6 336 38-461 6-344 (377)
68 PRK11646 multidrug resistance 100.0 1.6E-27 3.4E-32 231.6 32.0 363 33-501 20-385 (400)
69 PRK10054 putative transporter; 100.0 8.2E-28 1.8E-32 233.2 29.3 366 30-501 14-381 (395)
70 TIGR00885 fucP L-fucose:H+ sym 100.0 2.8E-27 6.1E-32 229.7 32.7 391 25-496 5-404 (410)
71 PRK15011 sugar efflux transpor 100.0 2.4E-27 5.2E-32 230.4 32.1 362 32-505 24-392 (393)
72 TIGR00886 2A0108 nitrite extru 100.0 6.4E-28 1.4E-32 233.1 27.2 356 27-452 5-365 (366)
73 PRK11652 emrD multidrug resist 100.0 6E-27 1.3E-31 228.3 32.6 350 22-464 7-358 (394)
74 TIGR00889 2A0110 nucleoside tr 100.0 6.7E-27 1.5E-31 228.1 31.4 386 32-509 11-408 (418)
75 TIGR00902 2A0127 phenyl propri 100.0 1.4E-26 3.1E-31 224.1 30.9 363 28-501 9-376 (382)
76 KOG2615 Permease of the major 100.0 5.3E-28 1.1E-32 215.4 18.5 348 65-468 65-416 (451)
77 TIGR00896 CynX cyanate transpo 100.0 7.5E-27 1.6E-31 224.2 26.2 332 40-468 17-350 (355)
78 PRK09528 lacY galactoside perm 100.0 3E-26 6.5E-31 225.1 27.8 377 31-505 18-405 (420)
79 PRK11902 ampG muropeptide tran 100.0 2.1E-25 4.6E-30 217.6 32.7 381 30-509 6-395 (402)
80 PRK11128 putative 3-phenylprop 99.9 3.9E-25 8.4E-30 214.2 30.7 358 32-500 13-375 (382)
81 TIGR00805 oat sodium-independe 99.9 2.5E-26 5.5E-31 233.1 23.2 404 26-467 36-582 (633)
82 PRK08633 2-acyl-glycerophospho 99.9 3.6E-25 7.7E-30 245.0 32.9 350 38-464 25-382 (1146)
83 PRK10207 dipeptide/tripeptide 99.9 9.5E-25 2.1E-29 215.8 31.9 421 27-501 18-473 (489)
84 KOG2504 Monocarboxylate transp 99.9 1.1E-26 2.4E-31 227.3 17.8 410 17-504 40-476 (509)
85 PRK06814 acylglycerophosphoeth 99.9 5.2E-25 1.1E-29 242.6 31.9 326 68-465 52-395 (1140)
86 TIGR00901 2A0125 AmpG-related 99.9 5.4E-25 1.2E-29 211.5 26.5 340 40-450 5-355 (356)
87 TIGR00924 yjdL_sub1_fam amino 99.9 5.3E-24 1.1E-28 210.6 33.4 407 27-501 14-465 (475)
88 PF05977 MFS_3: Transmembrane 99.9 3.3E-24 7.1E-29 211.0 31.1 376 28-501 15-391 (524)
89 TIGR00882 2A0105 oligosacchari 99.9 1.2E-24 2.6E-29 212.1 27.3 381 27-501 6-392 (396)
90 TIGR00806 rfc RFC reduced fola 99.9 1.2E-24 2.6E-29 204.1 25.0 181 19-242 24-208 (511)
91 COG2807 CynX Cyanate permease 99.9 5.3E-24 1.1E-28 189.7 27.5 369 23-501 12-382 (395)
92 TIGR00792 gph sugar (Glycoside 99.9 1.3E-24 2.8E-29 215.2 25.8 349 44-469 21-383 (437)
93 COG0738 FucP Fucose permease [ 99.9 4.1E-24 9E-29 193.5 23.6 385 23-497 13-402 (422)
94 KOG3764 Vesicular amine transp 99.9 1E-24 2.2E-29 195.8 16.0 385 22-502 20-452 (464)
95 TIGR02718 sider_RhtX_FptX side 99.9 8.6E-23 1.9E-27 198.6 31.0 378 25-500 3-387 (390)
96 TIGR01301 GPH_sucrose GPH fami 99.9 5.9E-22 1.3E-26 191.7 33.9 419 37-507 18-475 (477)
97 PRK09584 tppB putative tripept 99.9 2.5E-22 5.4E-27 199.8 31.1 415 30-501 28-476 (500)
98 PF06609 TRI12: Fungal trichot 99.9 1.8E-21 3.9E-26 190.6 29.3 378 28-464 49-465 (599)
99 PTZ00207 hypothetical protein; 99.9 1.7E-20 3.7E-25 185.3 30.4 184 18-238 23-207 (591)
100 KOG4686 Predicted sugar transp 99.9 4.6E-22 1E-26 170.1 14.2 402 20-510 41-449 (459)
101 PRK15462 dipeptide/tripeptide 99.9 1E-19 2.2E-24 176.9 31.9 164 31-232 17-184 (493)
102 PF03825 Nuc_H_symport: Nucleo 99.9 6.3E-20 1.4E-24 175.7 29.8 379 32-506 11-398 (400)
103 PRK09669 putative symporter Ya 99.9 2.8E-20 6.1E-25 183.9 26.2 347 44-469 31-391 (444)
104 TIGR00788 fbt folate/biopterin 99.9 2.1E-20 4.6E-25 184.4 23.8 378 23-469 26-416 (468)
105 PF11700 ATG22: Vacuole efflux 99.9 1.2E-18 2.6E-23 170.0 35.4 372 68-510 70-474 (477)
106 KOG2563 Permease of the major 99.8 3.6E-19 7.9E-24 163.5 22.9 408 16-506 38-452 (480)
107 PRK10429 melibiose:sodium symp 99.8 5E-19 1.1E-23 176.0 24.9 345 64-469 38-396 (473)
108 PF13347 MFS_2: MFS/sugar tran 99.8 1.1E-18 2.4E-23 171.6 26.3 347 44-469 23-387 (428)
109 PF01306 LacY_symp: LacY proto 99.8 5.2E-19 1.1E-23 165.8 21.6 377 32-506 16-403 (412)
110 PRK11462 putative transporter; 99.8 3.3E-17 7.1E-22 161.8 29.8 335 64-468 41-389 (460)
111 COG2211 MelB Na+/melibiose sym 99.8 3.8E-17 8.3E-22 154.7 27.8 377 64-504 44-437 (467)
112 KOG2325 Predicted transporter/ 99.8 6.5E-19 1.4E-23 167.0 14.0 414 17-500 28-471 (488)
113 PRK09848 glucuronide transport 99.8 4.2E-17 9.2E-22 161.6 27.4 340 45-469 31-391 (448)
114 COG2270 Permeases of the major 99.8 1.8E-17 3.8E-22 151.9 20.2 378 65-511 55-436 (438)
115 TIGR01272 gluP glucose/galacto 99.8 4E-17 8.8E-22 152.2 21.5 289 127-492 10-303 (310)
116 KOG3626 Organic anion transpor 99.8 1.6E-16 3.4E-21 156.9 24.5 406 24-467 98-650 (735)
117 PF03137 OATP: Organic Anion T 99.7 2.2E-19 4.7E-24 177.7 -0.0 405 28-467 8-515 (539)
118 COG3104 PTR2 Dipeptide/tripept 99.7 3.7E-15 8.1E-20 139.9 25.7 392 63-501 56-484 (498)
119 PRK10642 proline/glycine betai 99.7 1.5E-15 3.2E-20 152.0 19.8 170 64-261 282-458 (490)
120 PF03209 PUCC: PUCC protein; 99.6 1.2E-12 2.6E-17 120.8 24.1 366 64-502 11-396 (403)
121 TIGR01299 synapt_SV2 synaptic 99.6 1.2E-13 2.7E-18 141.2 17.5 142 70-241 597-738 (742)
122 TIGR00880 2_A_01_02 Multidrug 99.6 2.3E-14 5.1E-19 117.6 10.0 136 74-238 4-140 (141)
123 TIGR00889 2A0110 nucleoside tr 99.5 1.1E-13 2.4E-18 135.2 15.8 159 65-242 248-408 (418)
124 KOG2816 Predicted transporter 99.5 1.9E-13 4.2E-18 132.1 16.7 366 23-467 22-393 (463)
125 PRK15011 sugar efflux transpor 99.5 7.5E-13 1.6E-17 128.9 17.5 145 64-238 248-392 (393)
126 PRK09528 lacY galactoside perm 99.5 4.4E-13 9.6E-18 131.8 14.8 149 64-241 258-408 (420)
127 TIGR00890 2A0111 Oxalate/Forma 99.5 7.9E-13 1.7E-17 128.2 15.5 140 64-230 236-375 (377)
128 PRK11551 putative 3-hydroxyphe 99.5 1.7E-12 3.8E-17 127.2 17.9 157 43-237 240-396 (406)
129 PF03092 BT1: BT1 family; Int 99.5 1.1E-12 2.5E-17 127.8 16.1 394 43-510 10-419 (433)
130 PRK05122 major facilitator sup 99.4 4.6E-12 1E-16 123.9 18.2 142 69-239 250-391 (399)
131 cd06174 MFS The Major Facilita 99.4 5.3E-12 1.2E-16 121.1 18.0 143 64-235 207-350 (352)
132 PF05631 DUF791: Protein of un 99.4 6.4E-11 1.4E-15 107.8 22.8 183 17-241 32-221 (354)
133 PRK12382 putative transporter; 99.4 1.1E-11 2.3E-16 121.0 17.2 135 70-233 251-385 (392)
134 PRK03545 putative arabinose tr 99.4 2.3E-11 5E-16 118.5 19.3 139 64-233 237-376 (390)
135 TIGR00892 2A0113 monocarboxyla 99.4 1.8E-12 3.8E-17 128.5 11.5 152 42-231 260-415 (455)
136 TIGR00899 2A0120 sugar efflux 99.4 1E-11 2.2E-16 120.5 16.4 145 64-238 231-375 (375)
137 PRK10213 nepI ribonucleoside t 99.4 8.7E-12 1.9E-16 121.2 15.6 175 299-506 23-198 (394)
138 PRK09705 cynX putative cyanate 99.4 1.9E-11 4E-16 119.0 17.8 165 39-242 221-387 (393)
139 PRK09874 drug efflux system pr 99.4 1.2E-11 2.5E-16 121.5 16.6 136 69-233 259-394 (408)
140 PRK09556 uhpT sugar phosphate 99.4 1.3E-11 2.9E-16 123.0 16.8 180 26-233 261-445 (467)
141 TIGR00902 2A0127 phenyl propri 99.4 2E-11 4.3E-16 118.4 17.0 133 42-191 224-357 (382)
142 PRK03633 putative MFS family t 99.4 2.2E-11 4.7E-16 118.2 16.8 150 44-235 221-370 (381)
143 PRK03893 putative sialic acid 99.4 6.5E-12 1.4E-16 126.6 13.3 135 43-191 295-430 (496)
144 TIGR00891 2A0112 putative sial 99.4 1.3E-11 2.8E-16 121.1 15.1 180 297-507 13-192 (405)
145 PRK10489 enterobactin exporter 99.4 1.5E-11 3.3E-16 120.9 15.4 148 64-240 255-403 (417)
146 TIGR00710 efflux_Bcr_CflA drug 99.4 8.1E-12 1.8E-16 121.6 13.4 170 306-508 15-185 (385)
147 PRK11663 regulatory protein Uh 99.4 1.6E-11 3.6E-16 121.1 15.5 173 300-505 27-200 (434)
148 PF07690 MFS_1: Major Facilita 99.4 7.4E-12 1.6E-16 120.2 12.7 158 310-500 10-168 (352)
149 PRK15462 dipeptide/tripeptide 99.4 1.3E-11 2.9E-16 120.6 14.4 173 297-501 10-186 (493)
150 TIGR00711 efflux_EmrB drug res 99.3 1.6E-11 3.5E-16 123.4 14.5 174 301-507 7-181 (485)
151 PRK10054 putative transporter; 99.3 1.8E-11 3.9E-16 119.0 14.2 174 299-506 10-185 (395)
152 TIGR02332 HpaX 4-hydroxyphenyl 99.3 2.2E-11 4.7E-16 119.2 14.6 184 297-507 9-193 (412)
153 PRK09952 shikimate transporter 99.3 1.1E-10 2.5E-15 115.1 19.6 151 64-240 282-436 (438)
154 PRK03699 putative transporter; 99.3 2.7E-11 5.8E-16 118.1 14.7 167 31-237 213-380 (394)
155 PRK14995 methyl viologen resis 99.3 4.5E-11 9.9E-16 119.9 16.7 178 297-507 7-186 (495)
156 TIGR00897 2A0118 polyol permea 99.3 9.7E-11 2.1E-15 114.4 18.4 169 32-236 231-400 (402)
157 TIGR00879 SP MFS transporter, 99.3 4.2E-11 9.1E-16 120.2 16.2 182 26-240 287-474 (481)
158 TIGR00895 2A0115 benzoate tran 99.3 1.3E-11 2.8E-16 120.7 11.8 173 301-506 22-195 (398)
159 PRK10504 putative transporter; 99.3 3.1E-11 6.6E-16 120.8 14.4 176 297-505 11-187 (471)
160 PF01770 Folate_carrier: Reduc 99.3 2.9E-10 6.3E-15 106.6 19.7 151 64-242 36-187 (412)
161 TIGR00883 2A0106 metabolite-pr 99.3 2.9E-11 6.2E-16 118.1 13.5 144 32-191 228-377 (394)
162 TIGR00924 yjdL_sub1_fam amino 99.3 3.3E-11 7.1E-16 119.7 14.0 173 297-502 11-190 (475)
163 PRK10207 dipeptide/tripeptide 99.3 4.4E-11 9.6E-16 118.8 14.8 176 296-503 14-193 (489)
164 PLN00028 nitrate transmembrane 99.3 3.9E-11 8.5E-16 119.5 14.2 181 299-504 39-219 (476)
165 PRK12307 putative sialic acid 99.3 6.1E-11 1.3E-15 117.1 14.9 163 298-493 20-182 (426)
166 PRK10091 MFS transport protein 99.3 5.7E-11 1.2E-15 115.3 14.1 177 298-507 5-182 (382)
167 PF11700 ATG22: Vacuole efflux 99.3 3.9E-10 8.5E-15 110.6 19.5 160 41-238 300-469 (477)
168 COG2271 UhpC Sugar phosphate p 99.3 2.6E-11 5.6E-16 111.6 10.4 176 296-504 29-207 (448)
169 PRK10077 xylE D-xylose transpo 99.3 4E-10 8.7E-15 113.1 20.1 172 41-241 289-462 (479)
170 COG2814 AraJ Arabinose efflux 99.3 2.6E-10 5.7E-15 106.4 16.9 163 33-235 222-384 (394)
171 PRK10473 multidrug efflux syst 99.3 9.7E-11 2.1E-15 114.2 14.8 166 310-508 17-183 (392)
172 PRK15402 multidrug efflux syst 99.3 1.1E-10 2.5E-15 114.3 15.2 161 315-508 32-193 (406)
173 PRK11652 emrD multidrug resist 99.2 1.5E-10 3.2E-15 113.0 15.2 177 298-507 10-187 (394)
174 TIGR00893 2A0114 d-galactonate 99.2 2E-10 4.4E-15 112.2 15.8 165 29-232 221-394 (399)
175 PRK11010 ampG muropeptide tran 99.2 9.7E-10 2.1E-14 109.8 20.6 148 64-239 254-405 (491)
176 PRK11128 putative 3-phenylprop 99.2 3.7E-10 8E-15 109.6 16.8 121 64-191 236-357 (382)
177 TIGR00903 2A0129 major facilit 99.2 8.7E-11 1.9E-15 112.6 12.0 163 311-507 6-169 (368)
178 TIGR00881 2A0104 phosphoglycer 99.2 6.1E-11 1.3E-15 115.1 11.1 164 310-506 9-174 (379)
179 TIGR00900 2A0121 H+ Antiporter 99.2 2.9E-10 6.3E-15 109.7 15.5 131 44-189 232-363 (365)
180 PRK11273 glpT sn-glycerol-3-ph 99.2 7.1E-10 1.5E-14 110.1 18.2 156 39-233 269-431 (452)
181 PRK09584 tppB putative tripept 99.2 2.7E-10 5.9E-15 113.8 15.0 172 297-500 22-197 (500)
182 TIGR00712 glpT glycerol-3-phos 99.2 2.3E-10 4.9E-15 113.2 14.3 163 315-506 46-209 (438)
183 PRK15403 multidrug efflux syst 99.2 2.3E-10 4.9E-15 112.0 13.9 140 348-508 56-196 (413)
184 TIGR00792 gph sugar (Glycoside 99.2 5.4E-10 1.2E-14 110.8 16.6 121 66-191 255-382 (437)
185 TIGR00887 2A0109 phosphate:H+ 99.2 4.7E-10 1E-14 112.9 16.0 152 75-241 342-493 (502)
186 KOG1330 Sugar transporter/spin 99.2 2.3E-11 5.1E-16 113.0 5.9 171 313-515 50-221 (493)
187 PRK11646 multidrug resistance 99.2 3.1E-10 6.7E-15 110.6 14.1 163 310-506 24-188 (400)
188 KOG3098 Uncharacterized conser 99.2 1.2E-08 2.6E-13 97.5 24.3 338 74-464 56-412 (461)
189 PRK11102 bicyclomycin/multidru 99.2 1.4E-10 3E-15 112.6 11.5 158 317-507 12-170 (377)
190 TIGR00882 2A0105 oligosacchari 99.2 1E-09 2.2E-14 107.1 17.6 140 64-232 250-390 (396)
191 PF06813 Nodulin-like: Nodulin 99.2 6.1E-10 1.3E-14 98.3 14.2 153 22-187 2-155 (250)
192 PRK10406 alpha-ketoglutarate t 99.2 1.1E-09 2.4E-14 108.1 17.6 153 350-507 70-222 (432)
193 PF05977 MFS_3: Transmembrane 99.2 1E-09 2.2E-14 108.9 17.3 152 41-231 236-388 (524)
194 PRK11195 lysophospholipid tran 99.2 3.8E-10 8.2E-15 109.7 12.8 135 348-507 43-177 (393)
195 COG2270 Permeases of the major 99.1 1.1E-09 2.5E-14 101.1 14.8 177 24-239 255-431 (438)
196 TIGR02718 sider_RhtX_FptX side 99.1 2.1E-09 4.5E-14 104.7 17.8 146 64-232 239-386 (390)
197 TIGR00886 2A0108 nitrite extru 99.1 8E-10 1.7E-14 106.8 14.7 183 300-505 5-190 (366)
198 PRK11043 putative transporter; 99.1 7.9E-10 1.7E-14 108.2 14.7 154 320-506 30-183 (401)
199 KOG3762 Predicted transporter 99.1 1.2E-09 2.7E-14 103.3 14.5 133 348-501 411-544 (618)
200 TIGR01272 gluP glucose/galacto 99.1 2.9E-09 6.4E-14 99.4 16.8 119 64-191 174-292 (310)
201 PRK15075 citrate-proton sympor 99.1 3.9E-09 8.4E-14 104.3 18.5 138 38-191 253-396 (434)
202 PRK15034 nitrate/nitrite trans 99.1 1.7E-09 3.8E-14 104.7 14.7 190 297-502 35-230 (462)
203 TIGR00894 2A0114euk Na(+)-depe 99.1 3.4E-10 7.4E-15 113.0 10.1 135 348-501 81-216 (465)
204 TIGR00885 fucP L-fucose:H+ sym 99.1 1.7E-09 3.7E-14 105.5 14.6 186 299-501 6-204 (410)
205 TIGR00898 2A0119 cation transp 99.1 2.1E-09 4.6E-14 108.6 15.8 140 73-241 360-499 (505)
206 KOG0569 Permease of the major 99.1 1.1E-08 2.5E-13 98.6 19.6 186 21-241 268-459 (485)
207 TIGR00880 2_A_01_02 Multidrug 99.1 1.1E-09 2.4E-14 89.6 10.0 129 353-502 8-136 (141)
208 TIGR00896 CynX cyanate transpo 99.1 2.9E-09 6.3E-14 102.3 14.3 134 41-191 215-350 (355)
209 PRK11902 ampG muropeptide tran 99.1 1.2E-08 2.6E-13 99.8 18.5 141 64-236 241-389 (402)
210 COG2223 NarK Nitrate/nitrite t 99.0 3.8E-09 8.2E-14 97.7 13.3 173 297-501 15-190 (417)
211 KOG2504 Monocarboxylate transp 99.0 1.7E-09 3.7E-14 106.8 11.4 176 24-237 299-476 (509)
212 PRK09848 glucuronide transport 99.0 7.1E-09 1.5E-13 102.9 15.9 124 64-191 260-390 (448)
213 PRK10429 melibiose:sodium symp 99.0 1.3E-08 2.9E-13 101.5 17.4 122 66-191 264-395 (473)
214 PF03825 Nuc_H_symport: Nucleo 99.0 1.3E-08 2.9E-13 98.0 16.6 173 33-238 217-397 (400)
215 KOG4686 Predicted sugar transp 99.0 1.9E-09 4.2E-14 93.5 9.5 148 24-191 268-416 (459)
216 PRK10133 L-fucose transporter; 99.0 8.3E-09 1.8E-13 101.6 15.2 151 297-464 27-177 (438)
217 PF01306 LacY_symp: LacY proto 99.0 2.1E-08 4.5E-13 94.9 16.8 148 64-240 255-404 (412)
218 PRK08633 2-acyl-glycerophospho 99.0 1.5E-08 3.1E-13 113.2 18.1 118 64-187 264-382 (1146)
219 TIGR00805 oat sodium-independe 99.0 4.8E-09 1E-13 107.4 12.9 180 315-506 52-283 (633)
220 PF06963 FPN1: Ferroportin1 (F 99.0 3.4E-07 7.4E-12 87.9 23.5 382 27-461 6-413 (432)
221 TIGR00901 2A0125 AmpG-related 98.9 1.1E-08 2.4E-13 98.4 13.4 110 64-173 240-355 (356)
222 PRK09669 putative symporter Ya 98.9 5.6E-08 1.2E-12 96.4 18.7 120 68-192 264-391 (444)
223 TIGR01301 GPH_sucrose GPH fami 98.9 2.4E-08 5.3E-13 97.5 15.5 197 298-507 6-222 (477)
224 TIGR00806 rfc RFC reduced fola 98.9 3.1E-08 6.7E-13 94.5 14.9 160 315-506 45-205 (511)
225 KOG3764 Vesicular amine transp 98.9 3.1E-09 6.7E-14 97.0 7.7 136 348-504 111-247 (464)
226 PF13347 MFS_2: MFS/sugar tran 98.9 1.6E-08 3.4E-13 99.8 13.4 147 30-192 232-387 (428)
227 KOG0637 Sucrose transporter an 98.9 1.4E-09 3.1E-14 101.0 5.2 123 64-186 63-202 (498)
228 TIGR00926 2A1704 Peptide:H+ sy 98.9 2.1E-06 4.5E-11 87.6 28.2 153 64-232 19-177 (654)
229 PRK06814 acylglycerophosphoeth 98.9 3.2E-08 6.9E-13 110.2 15.4 118 64-187 257-394 (1140)
230 KOG2615 Permease of the major 98.9 4.7E-09 1E-13 95.3 7.1 113 344-465 69-181 (451)
231 COG0477 ProP Permeases of the 98.9 1E-07 2.2E-12 89.7 16.3 158 36-228 15-176 (338)
232 KOG0253 Synaptic vesicle trans 98.8 4.4E-08 9.6E-13 88.5 11.6 133 77-240 390-522 (528)
233 TIGR00788 fbt folate/biopterin 98.8 5.4E-08 1.2E-12 96.5 12.6 130 62-191 282-415 (468)
234 COG3104 PTR2 Dipeptide/tripept 98.8 2.4E-08 5.2E-13 94.7 9.2 182 296-504 21-206 (498)
235 PTZ00207 hypothetical protein; 98.8 1.1E-07 2.4E-12 95.1 14.1 164 308-501 39-202 (591)
236 PF06609 TRI12: Fungal trichot 98.8 7.9E-08 1.7E-12 95.5 12.3 150 317-501 65-214 (599)
237 COG2211 MelB Na+/melibiose sym 98.8 5.9E-07 1.3E-11 86.1 17.5 125 64-192 268-399 (467)
238 KOG0255 Synaptic vesicle trans 98.7 4.9E-08 1.1E-12 98.9 10.7 138 345-506 120-257 (521)
239 TIGR00769 AAA ADP/ATP carrier 98.7 6.3E-05 1.4E-09 73.4 30.8 123 66-188 41-190 (472)
240 PF02487 CLN3: CLN3 protein; 98.7 6.3E-06 1.4E-10 77.8 22.5 108 70-188 61-168 (402)
241 KOG2532 Permease of the major 98.7 8.3E-08 1.8E-12 93.8 10.2 136 348-501 78-213 (466)
242 COG2807 CynX Cyanate permease 98.7 8.9E-07 1.9E-11 80.5 15.0 155 39-232 224-380 (395)
243 PF06779 DUF1228: Protein of u 98.7 1.5E-07 3.2E-12 66.9 7.9 76 35-120 4-79 (85)
244 PRK11462 putative transporter; 98.7 2E-06 4.4E-11 85.3 18.9 120 68-191 263-389 (460)
245 KOG0252 Inorganic phosphate tr 98.6 1.3E-07 2.7E-12 88.4 8.7 164 344-508 85-250 (538)
246 PF06813 Nodulin-like: Nodulin 98.6 3.4E-07 7.5E-12 81.0 10.9 144 307-465 13-156 (250)
247 PF05978 UNC-93: Ion channel r 98.5 2.4E-06 5.2E-11 69.7 12.7 116 65-187 34-149 (156)
248 KOG3574 Acetyl-CoA transporter 98.5 9.2E-06 2E-10 74.1 16.4 149 21-182 29-188 (510)
249 KOG4332 Predicted sugar transp 98.5 4.4E-06 9.5E-11 72.4 13.6 86 64-156 68-154 (454)
250 PF03209 PUCC: PUCC protein; 98.5 1.8E-05 3.9E-10 74.0 17.8 154 64-233 240-394 (403)
251 KOG0254 Predicted transporter 98.4 1.8E-06 3.8E-11 87.2 11.9 139 348-506 94-232 (513)
252 COG0738 FucP Fucose permease [ 98.4 7.7E-06 1.7E-10 75.7 13.6 149 24-191 237-386 (422)
253 KOG2533 Permease of the major 98.3 6.5E-06 1.4E-10 80.9 12.0 144 348-506 86-230 (495)
254 KOG3810 Micronutrient transpor 98.3 9.3E-06 2E-10 73.2 11.7 151 64-242 37-188 (433)
255 KOG3762 Predicted transporter 98.3 1.2E-06 2.6E-11 83.6 6.5 140 64-232 402-542 (618)
256 PF00083 Sugar_tr: Sugar (and 98.3 7.3E-08 1.6E-12 96.0 -1.7 146 346-506 49-194 (451)
257 TIGR00939 2a57 Equilibrative N 98.2 0.00096 2.1E-08 65.2 25.2 55 126-185 105-159 (437)
258 KOG1479 Nucleoside transporter 98.2 0.00056 1.2E-08 64.3 21.4 174 37-241 32-208 (406)
259 PF12832 MFS_1_like: MFS_1 lik 98.2 1.2E-05 2.6E-10 56.9 7.6 67 32-108 9-75 (77)
260 PF13000 Acatn: Acetyl-coenzym 98.2 7.7E-05 1.7E-09 71.2 15.1 45 423-467 424-468 (544)
261 KOG2325 Predicted transporter/ 98.1 2.6E-05 5.6E-10 75.3 11.1 154 348-506 76-232 (488)
262 KOG1237 H+/oligopeptide sympor 98.0 0.012 2.7E-07 59.3 29.1 158 42-232 57-240 (571)
263 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00017 3.6E-09 73.9 13.1 138 358-501 38-179 (654)
264 KOG2816 Predicted transporter 97.8 0.00035 7.6E-09 68.3 13.8 120 64-190 273-393 (463)
265 KOG2563 Permease of the major 97.8 0.00034 7.3E-09 66.0 11.8 121 347-467 83-203 (480)
266 PF05631 DUF791: Protein of un 97.8 0.0012 2.5E-08 61.1 15.1 157 319-507 57-220 (354)
267 PF03219 TLC: TLC ATP/ADP tran 97.7 0.064 1.4E-06 53.1 31.3 123 66-188 56-205 (491)
268 PF00854 PTR2: POT family; In 97.7 0.00039 8.4E-09 67.2 11.0 113 99-234 2-120 (372)
269 PF07672 MFS_Mycoplasma: Mycop 97.4 0.0023 4.9E-08 56.2 10.6 116 348-463 146-265 (267)
270 COG3202 ATP/ADP translocase [E 97.2 0.24 5.1E-06 48.1 25.0 124 65-188 58-209 (509)
271 PF03092 BT1: BT1 family; Int 97.1 0.0027 5.8E-08 62.5 9.7 164 62-241 249-417 (433)
272 PRK03612 spermidine synthase; 97.1 0.02 4.3E-07 57.5 15.3 122 64-187 46-169 (521)
273 PF12832 MFS_1_like: MFS_1 lik 97.0 0.0015 3.4E-08 46.2 5.2 60 311-382 15-74 (77)
274 KOG3626 Organic anion transpor 96.9 0.012 2.7E-07 59.9 12.5 179 319-509 120-348 (735)
275 PF05978 UNC-93: Ion channel r 96.9 0.019 4.1E-07 47.0 11.2 100 356-464 50-149 (156)
276 KOG3097 Predicted membrane pro 96.9 0.25 5.4E-06 45.2 18.7 73 78-157 68-140 (390)
277 PF01733 Nucleoside_tran: Nucl 96.9 0.00018 3.9E-09 67.2 -0.8 112 348-460 187-304 (309)
278 TIGR00769 AAA ADP/ATP carrier 96.7 0.046 1E-06 53.8 14.3 107 359-465 60-190 (472)
279 PF03137 OATP: Organic Anion T 96.6 0.00035 7.5E-09 70.2 -1.4 176 318-505 25-251 (539)
280 PF02487 CLN3: CLN3 protein; 96.6 0.049 1.1E-06 52.0 12.9 114 64-187 277-395 (402)
281 KOG3098 Uncharacterized conser 96.4 0.18 3.9E-06 49.2 16.1 113 71-184 282-409 (461)
282 KOG3880 Predicted small molecu 96.4 0.018 3.9E-07 51.7 8.5 108 70-188 64-171 (409)
283 PF06963 FPN1: Ferroportin1 (F 96.3 0.074 1.6E-06 51.7 12.5 123 64-186 289-415 (432)
284 PF00854 PTR2: POT family; In 95.7 0.055 1.2E-06 52.3 9.1 117 374-503 2-122 (372)
285 COG0477 ProP Permeases of the 95.7 0.2 4.4E-06 46.4 12.6 129 348-493 44-174 (338)
286 PF01770 Folate_carrier: Reduc 95.6 0.29 6.4E-06 46.9 13.0 125 362-506 60-184 (412)
287 KOG3574 Acetyl-CoA transporter 94.4 0.54 1.2E-05 44.1 10.7 153 295-463 30-192 (510)
288 PF06779 DUF1228: Protein of u 94.2 0.13 2.7E-06 36.9 5.0 72 311-394 7-78 (85)
289 KOG0637 Sucrose transporter an 93.9 0.23 5E-06 47.6 7.6 153 299-463 35-202 (498)
290 PF03219 TLC: TLC ATP/ADP tran 93.4 0.78 1.7E-05 45.6 10.6 109 357-465 73-205 (491)
291 COG3202 ATP/ADP translocase [E 91.9 3.7 8E-05 40.2 12.5 111 355-465 74-209 (509)
292 TIGR00939 2a57 Equilibrative N 91.5 2.3 5.1E-05 41.8 11.3 118 69-187 308-432 (437)
293 PRK03612 spermidine synthase; 91.1 3.7 8E-05 41.5 12.4 49 438-498 143-191 (521)
294 COG4262 Predicted spermidine s 88.4 22 0.00048 33.3 14.4 118 64-186 39-162 (508)
295 KOG1479 Nucleoside transporter 85.3 6.5 0.00014 37.7 9.1 114 66-185 280-401 (406)
296 KOG1237 H+/oligopeptide sympor 84.0 31 0.00067 35.4 14.0 133 356-501 86-242 (571)
297 KOG4332 Predicted sugar transp 83.7 1.5 3.2E-05 39.1 3.8 53 322-386 63-115 (454)
298 PF07672 MFS_Mycoplasma: Mycop 80.9 37 0.00081 30.5 11.4 99 69-168 142-247 (267)
299 KOG3810 Micronutrient transpor 75.7 22 0.00047 33.5 8.7 98 67-170 270-369 (433)
300 KOG3880 Predicted small molecu 70.8 13 0.00027 34.3 5.9 113 69-187 289-402 (409)
301 KOG2601 Iron transporter [Inor 69.0 60 0.0013 31.0 9.9 74 26-108 30-103 (503)
302 PF02990 EMP70: Endomembrane p 65.8 39 0.00085 34.3 9.1 25 348-372 302-326 (521)
303 PF01733 Nucleoside_tran: Nucl 65.0 2.2 4.7E-05 39.9 0.1 115 72-186 186-307 (309)
304 PF06912 DUF1275: Protein of u 62.5 1E+02 0.0023 26.7 15.7 43 72-114 50-95 (209)
305 PF11947 DUF3464: Protein of u 62.2 15 0.00032 29.8 4.3 34 422-455 112-145 (153)
306 COG5336 Uncharacterized protei 59.9 35 0.00076 25.5 5.4 39 69-107 43-82 (116)
307 COG3619 Predicted membrane pro 51.7 1.7E+02 0.0037 25.8 17.0 123 67-191 54-196 (226)
308 KOG2881 Predicted membrane pro 51.1 1.9E+02 0.004 26.0 12.4 24 362-385 259-282 (294)
309 PF02694 UPF0060: Uncharacteri 49.8 41 0.00088 25.3 4.4 52 68-119 54-105 (107)
310 TIGR02230 ATPase_gene1 F0F1-AT 49.6 1.1E+02 0.0024 22.9 6.9 27 165-191 45-71 (100)
311 PRK02237 hypothetical protein; 45.0 67 0.0015 24.2 5.0 52 68-119 56-107 (109)
312 COG1288 Predicted membrane pro 44.2 2.2E+02 0.0048 27.8 9.4 32 211-242 214-247 (481)
313 TIGR01667 YCCS_YHJK integral m 40.1 2.3E+02 0.005 30.1 9.9 43 96-143 55-97 (701)
314 TIGR01666 YCCS hypothetical me 39.3 2.8E+02 0.0061 29.5 10.4 50 89-143 44-97 (704)
315 COG5336 Uncharacterized protei 39.1 1.5E+02 0.0032 22.4 5.9 34 434-467 36-69 (116)
316 TIGR02230 ATPase_gene1 F0F1-AT 37.6 1.5E+02 0.0032 22.2 5.8 31 359-389 59-89 (100)
317 KOG4830 Predicted sugar transp 36.6 21 0.00045 31.9 1.5 65 26-100 20-93 (412)
318 PRK11469 hypothetical protein; 36.3 2E+02 0.0044 24.5 7.4 46 69-114 135-181 (188)
319 PRK11469 hypothetical protein; 34.4 2.9E+02 0.0064 23.5 12.7 41 349-389 141-181 (188)
320 PF11947 DUF3464: Protein of u 34.2 1.8E+02 0.0039 23.8 6.3 49 127-178 97-145 (153)
321 PRK10263 DNA translocase FtsK; 31.9 3.6E+02 0.0079 30.8 9.9 22 76-97 60-81 (1355)
322 TIGR00267 conserved hypothetic 31.5 3.1E+02 0.0067 22.9 8.1 23 360-382 130-152 (169)
323 PF12805 FUSC-like: FUSC-like 31.4 1.8E+02 0.0038 26.8 6.9 37 102-143 3-39 (284)
324 COG4769 Predicted membrane pro 30.9 46 0.00099 27.2 2.4 52 76-139 81-132 (181)
325 COG1268 BioY Uncharacterized c 30.6 1.3E+02 0.0029 25.4 5.3 24 74-97 88-111 (184)
326 PF02632 BioY: BioY family; I 28.4 1.1E+02 0.0025 24.8 4.4 26 74-99 59-84 (148)
327 PF13000 Acatn: Acetyl-coenzym 28.1 5.7E+02 0.012 25.9 9.7 65 127-191 405-469 (544)
328 PF07857 DUF1632: CEO family ( 27.8 4.6E+02 0.0099 23.7 12.2 23 215-237 114-136 (254)
329 KOG3097 Predicted membrane pro 27.6 5.4E+02 0.012 24.5 8.9 24 360-383 75-98 (390)
330 PRK14229 camphor resistance pr 27.4 2.8E+02 0.0061 21.1 7.1 21 138-158 60-80 (108)
331 PF15061 DUF4538: Domain of un 27.1 1.2E+02 0.0025 20.0 3.3 19 214-232 4-22 (58)
332 PF04024 PspC: PspC domain; I 24.7 1.1E+02 0.0024 20.3 3.1 27 214-240 30-60 (61)
333 PRK10697 DNA-binding transcrip 24.5 1.6E+02 0.0034 22.9 4.2 13 230-242 57-69 (118)
334 PF11151 DUF2929: Protein of u 23.5 2.2E+02 0.0049 18.6 6.0 29 212-240 28-56 (57)
335 PF04281 Tom22: Mitochondrial 23.2 2.7E+02 0.0058 22.3 5.5 23 429-451 60-82 (137)
336 PF10785 NADH-u_ox-rdase: NADH 23.2 2E+02 0.0043 20.9 4.4 41 80-120 30-77 (86)
337 COG2076 EmrE Membrane transpor 22.2 2.2E+02 0.0048 21.6 4.6 46 348-394 6-51 (106)
338 PF08611 DUF1774: Fungal prote 22.1 3.4E+02 0.0073 20.2 5.8 46 441-501 26-71 (97)
339 TIGR00986 3a0801s05tom22 mitoc 21.9 2.5E+02 0.0054 22.6 5.0 23 429-451 58-80 (145)
No 1
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=6.2e-46 Score=371.77 Aligned_cols=495 Identities=61% Similarity=1.010 Sum_probs=345.9
Q ss_pred HHhhhcchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhh
Q 010112 11 ALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGW 90 (518)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~ 90 (518)
.+|+.+..+++++++.++.++.+.+++|...++.+.|.+.+++++ .+.+.++.+.+++.+.+.++..+++++.|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~ 78 (502)
T TIGR00887 4 EADTAPFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYVYYH-----GKGPLPSSVSAAVNGSASIGTLAGQLFFGW 78 (502)
T ss_pred hhhccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----CcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777888999999999999999999999999999988775421 123567778899999999999999999999
Q ss_pred hhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHH
Q 010112 91 LGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA 170 (518)
Q Consensus 91 l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~ 170 (518)
++||+|||+++.++.++..++.++++++++.....+++.++++|+++|++.|...+....+++|++|+++|++++++.+.
T Consensus 79 l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~ 158 (502)
T TIGR00887 79 LADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFA 158 (502)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHH
Confidence 99999999999999999999999998876532222257899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccH
Q 010112 171 MQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNA 250 (518)
Q Consensus 171 ~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~ 250 (518)
...+|.++++.++..+...........+..-..........+++||++|.+.++++++..+..+++||||+|+..+++++
T Consensus 159 ~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~~~~lpESpr~l~~~~~~~ 238 (502)
T TIGR00887 159 MQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYFRLTIPETPRYTADVAKDV 238 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHhCcch
Confidence 99999999999988776433210000000000000000112457999999998888887777788999999975555544
Q ss_pred HHHHHHHHHHHhhhcchhhhHhh---hhhh-ccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHh
Q 010112 251 KQAAADMSKVLQVELEAEEDKVA---KLSQ-RDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAI 326 (518)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (518)
+++.+...+..+.+.+++.++.+ ++++ .+.+.+++++++..++..+..+.....++...+.+|+...+.|.++++.
T Consensus 239 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i~~~~ 318 (502)
T TIGR00887 239 EQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVILSAI 318 (502)
T ss_pred HHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHH
Confidence 44555555544322211111111 1111 1112344554433333333444444555666677888888899999888
Q ss_pred cCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHH
Q 010112 327 GWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGF 406 (518)
Q Consensus 327 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (518)
|+++...+...................++.+++.+++++++||+|||+.++.+..+.+++.+++....... .....
T Consensus 319 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~----~~~~~ 394 (502)
T TIGR00887 319 GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHL----STHGF 394 (502)
T ss_pred cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhc----chhHH
Confidence 88765432211111111122233444556677888999999999999999888877777766655432110 11112
Q ss_pred HHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHH
Q 010112 407 VIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSL 486 (518)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~ 486 (518)
.....+...++..+..+..+.+.+|.+|++.|+++.|+.+..++++++++|.+.+++.+..+.. .|++...++...|
T Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~~~~~~~~ 471 (502)
T TIGR00887 395 LAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPT---KGYPTGIWMGHVL 471 (502)
T ss_pred HHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccc---ccccccccchHHH
Confidence 2222233333445566778888999999999999999999999999999999999998633210 0011134666788
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCChhhhccC
Q 010112 487 IMLGVVNFVGMICTLCVPESKGRSLEELSRN 517 (518)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (518)
.+++++++++.+..+++||+++|++||+++|
T Consensus 472 ~i~~~~~~~~~i~~~~lpEt~~~~leei~~~ 502 (502)
T TIGR00887 472 EIFALFMFLGILFTLLIPETKGKSLEELSGE 502 (502)
T ss_pred HHHHHHHHHHHHHheEeccCCCCCHHhhhCC
Confidence 8888888888776667899999999998765
No 2
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-47 Score=343.02 Aligned_cols=475 Identities=67% Similarity=1.115 Sum_probs=398.9
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcch
Q 010112 18 QLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGR 97 (518)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Gr 97 (518)
.|++.+.+.+..++.|.+.||..+++.+.|.+...|++.++.. .++++...+.+..+..+|.++||++.|+++||+||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~lY~~~~~~~--g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GR 113 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILGYLYYHGDESG--GHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGR 113 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHHHHhcCCCCCC--CcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 7888889999999999999999999999999999887766544 56888899999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccCCchh-hHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHH
Q 010112 98 KKVYGITLILMVISSIASGLSFGKSAK-GVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (518)
Q Consensus 98 r~~~~~~~~l~~i~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~ 176 (518)
|+++...++++.++++++++....+.. +.++++...|++.|+|.|+-+|.+.+..+|....++||...+.+.+..++|.
T Consensus 114 K~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gi 193 (538)
T KOG0252|consen 114 KKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGI 193 (538)
T ss_pred hhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhH
Confidence 999999999999999988887766554 5688999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHH
Q 010112 177 LAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAAD 256 (518)
Q Consensus 177 ~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~ 256 (518)
+.|.+++..+...+....+.. ++-+..+.-||..+.+.++++++.+...+.+||++++..+..++.+++.++
T Consensus 194 laG~ivt~Iv~~~fe~~~~~~--------~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~~Y~al~~~~~~~a~~d 265 (538)
T KOG0252|consen 194 LAGGIVALIVSAIFEKIFNGP--------STYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETARYTALVSKKLKQAAGD 265 (538)
T ss_pred hhccHHHHHHHHHHhccCCCC--------CCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcchhHHHHhhcCHhhhhhc
Confidence 999988888776555321110 111223556999999999999999998889999999876666676666655
Q ss_pred HHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchh
Q 010112 257 MSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMN 336 (518)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 336 (518)
.++..+.+.+++.+. +.....+++...+|.....+++.+.++..+..||...+.+|+...+...++++.|+.+.....
T Consensus 266 ~~k~~~~~~~~~~~~-~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~~~~~- 343 (538)
T KOG0252|consen 266 MKKVLSVDIEAESTA-ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPSANTY- 343 (538)
T ss_pred cccccccccchhhcc-ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCCcchH-
Confidence 555544433333222 222223334445566666666778899999999999999999999999999999999988554
Q ss_pred hhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHH
Q 010112 337 AIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFF 416 (518)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (518)
...+..+-...++..++.++|..+..+++|++|||++.+.+++++++..+.++....+ ..+.....+...+..++
T Consensus 344 --~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~---~~~~~Gf~v~y~l~~ff 418 (538)
T KOG0252|consen 344 --HELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQ---LENTIGFVVLYSLTFFF 418 (538)
T ss_pred --HHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCccc---ccccCceeehHHHHHHH
Confidence 5555666777888889999999999999999999999999999999999988877632 22556677888888999
Q ss_pred HhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHH
Q 010112 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVG 496 (518)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 496 (518)
..++++.....+.+|.+|.+.|++..|+..+.+-.|++++...+.++.+.. |+...+.+.++++++++++++
T Consensus 419 ~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~--------yp~~~g~~~v~~i~~~~~~~g 490 (538)
T KOG0252|consen 419 GNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN--------YPPNIGVRNVFIILAGCMLLG 490 (538)
T ss_pred HhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc--------CCccccchHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999998532 356789999999999999999
Q ss_pred HHHHhhcccCCCCChhhhccC
Q 010112 497 MICTLCVPESKGRSLEELSRN 517 (518)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~~ 517 (518)
.+..+++||+++|++||++++
T Consensus 491 i~~T~l~pEtk~~~leei~~e 511 (538)
T KOG0252|consen 491 ILFTLLIPETKGKSLEEISNE 511 (538)
T ss_pred HheeEEeecccccCHHHhcCh
Confidence 999999999999999988654
No 3
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=1.7e-42 Score=350.74 Aligned_cols=451 Identities=19% Similarity=0.326 Sum_probs=335.3
Q ss_pred HhhhcchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhh
Q 010112 12 LDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWL 91 (518)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l 91 (518)
+++....+++|.++++++++.+..+++...++.++|.+.+++ +++..+.+++.+++.++.+++++++|++
T Consensus 156 l~~~~~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~~~----------gls~~~~g~l~s~~~lG~iiG~li~G~L 225 (742)
T TIGR01299 156 IQECGHGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEKDL----------CIPDSGKGMLGLIVYLGMMVGAFFWGGL 225 (742)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566788899999999999999999999999999999999 9999999999999999999999999999
Q ss_pred hhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHH
Q 010112 92 GDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAM 171 (518)
Q Consensus 92 ~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~ 171 (518)
+||+|||+++++++++.++++++++++++ ++.++++|++.|++.|+..+...+++.|++|+++|++.++++..+
T Consensus 226 sDR~GRR~~lii~lil~~i~~ll~afa~s------~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~ 299 (742)
T TIGR01299 226 ADKLGRKQCLLICLSVNGFFAFFSSFVQG------YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMF 299 (742)
T ss_pred HHHhCcHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988 799999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHH
Q 010112 172 QGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAK 251 (518)
Q Consensus 172 ~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~ 251 (518)
..+|.++++.++..+....+.. ... + ......+||+.+++.++++++.++..+++||||+|+ ..+++.+
T Consensus 300 ~~iG~ila~~la~~il~~~G~~-------~~~-g--~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL-~~~gr~~ 368 (742)
T TIGR01299 300 WMIGGIYAAAMAWAIIPHYGWS-------FQM-G--SAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFF-LENGKHD 368 (742)
T ss_pred HHHHHHHHHHHHHHHHHhccch-------hcc-c--cccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHH-HHCCCHH
Confidence 9999999999988876443310 000 0 001235699999998888888777788899999997 4445566
Q ss_pred HHHHHHHHHHhhhcch---hhh-----Hhhhh---------hhccCC---------------cccchhhhhhhhhhhHHH
Q 010112 252 QAAADMSKVLQVELEA---EED-----KVAKL---------SQRDSN---------------SFGLFSREFLKRHGLHLF 299 (518)
Q Consensus 252 ~~~~~~~~~~~~~~~~---~~~-----~~~~~---------~~~~~~---------------~~~~~~~~~~~~~~~~~~ 299 (518)
++.+.+.+..+.+... +.+ +.+.. ++...+ .+..++....++.++..+
T Consensus 369 eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl 448 (742)
T TIGR01299 369 EAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITI 448 (742)
T ss_pred HHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHH
Confidence 7777776665433210 000 00000 000000 000111111222344667
Q ss_pred HHHHHHHHHHHHHHhHHhhHHHHHHHh---c-------------------CCCCC-------c------ch---------
Q 010112 300 GTTSTWFLLDIAFYSQNLFQKDIFSAI---G-------------------WIPPA-------A------TM--------- 335 (518)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---g-------------------~~~~~-------~------~~--------- 335 (518)
.+.+.|++..+.+|++..|.|.++++. + ++... . +.
T Consensus 449 ~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (742)
T TIGR01299 449 KLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFED 528 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhccccccccccc
Confidence 788889999999999999999886542 0 00000 0 00
Q ss_pred --------------h--------------------------h-------------------hHHHHHHHHHHHHHHHhhc
Q 010112 336 --------------N--------------------------A-------------------IHEVYKIARAQTLIALCST 356 (518)
Q Consensus 336 --------------~--------------------------~-------------------~~~~~~~~~~~~~~~~~~~ 356 (518)
+ . .............+..++.
T Consensus 529 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~ 608 (742)
T TIGR01299 529 SLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAV 608 (742)
T ss_pred ccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHH
Confidence 0 0 0000112233456667888
Q ss_pred ccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh
Q 010112 357 VPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR 436 (518)
Q Consensus 357 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 436 (518)
+++.+++++++||+|||+++..+.++.+++.+++.+.. +....+++.++..++. .+..+..+++++|.+|++
T Consensus 609 i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~-------s~~~ll~~~~l~g~~~-~~~~~~~~a~~aEl~Pt~ 680 (742)
T TIGR01299 609 LPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGN-------SESAMIALLCLFGGLS-IAAWNALDVLTVELYPSD 680 (742)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHc-------cHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHcCHH
Confidence 99999999999999999999999888888887776544 1222333333333322 334567778999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccCCCCCh
Q 010112 437 LRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPESKGRSL 511 (518)
Q Consensus 437 ~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (518)
.|++++|+.++.+++|++++|++.+.+.+ .+...+|++++++.+++.++.+++||++++.+
T Consensus 681 ~Rgta~Gi~~~~~rlGaiigp~i~g~L~~--------------~~~~~pf~i~a~~lll~~ll~~~LPET~~~~l 741 (742)
T TIGR01299 681 KRATAFGFLNALCKAAAVLGILIFGSFVG--------------ITKAAPILFASAALACGGLLALKLPDTRGQVL 741 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------hhhHHHHHHHHHHHHHHHHHHHhCCCCccccc
Confidence 99999999999999999999999998873 24456788888888888887778899988753
No 4
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.6e-42 Score=324.21 Aligned_cols=442 Identities=19% Similarity=0.260 Sum_probs=336.5
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCc----hhhHHHHHHHHHHHHhhhhhhhhhhhhcchh
Q 010112 23 TAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPP----NVSAAVNGVALCGTLAGQLFFGWLGDKLGRK 98 (518)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~----~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr 98 (518)
.......++.+-.+|....+++..+.+.+...+.-.+..+...++ ...+.+.+++.+|.++|++..|.++||+|||
T Consensus 11 ~~~~~~~~gsf~~Gy~~~~iNap~~~i~~f~n~t~~~r~g~~~s~~~~~~lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK 90 (485)
T KOG0569|consen 11 LAVIVATLGSFQFGYNIGVVNAPQELIKSFINETLIERYGLPLSDSTLDLLWSLIVSIFFIGGMIGSFSSGLLADRFGRK 90 (485)
T ss_pred HHHHHHHHhchhhhhhheecCchHHHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch
Confidence 344445556688888888887776655443311111111112333 3568899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHH
Q 010112 99 KVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (518)
Q Consensus 99 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~l 178 (518)
..+.++.++..++.+++.++... +.+..++++|++.|+..|......+.++.|..|.+.||......+.+..+|.++
T Consensus 91 ~~l~~~~~l~~~~~~~~~~s~~~---~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll 167 (485)
T KOG0569|consen 91 NALLLSNLLAVLAALLMGLSKSA---PSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILL 167 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHH
Confidence 99999999999888888776542 228999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHH
Q 010112 179 GGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMS 258 (518)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (518)
+..++..-. .| .+..|++.+.+..+++++..+...++||||+|+..++++++++++.++
T Consensus 168 ~~~~~l~~i--lG-------------------t~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A~~sl~ 226 (485)
T KOG0569|consen 168 GQVLGLPSL--LG-------------------TEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEARKALK 226 (485)
T ss_pred HHHHccHHh--cC-------------------CCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHHHHHHH
Confidence 977764322 22 345599999999999999999899999999999777888888888888
Q ss_pred HHHhhhcchhhhHh-----hhh---hhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCC
Q 010112 259 KVLQVELEAEEDKV-----AKL---SQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIP 330 (518)
Q Consensus 259 ~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 330 (518)
..++.+.+++..+. ++. ++++.+.++.++++..|+.. ...+.........+.+....|...++.+.|+++
T Consensus 227 ~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~--~i~~~v~~~qq~sGi~ai~~Yst~i~~~aG~~~ 304 (485)
T KOG0569|consen 227 FYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPL--LIGIVVSFAQQFSGINAIFFYSTSIFKTAGFTP 304 (485)
T ss_pred HHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHH--HHHHHHHHHHHhcCcceeHHHHHHHHHHcCCCH
Confidence 88876543322211 111 11233456788887777642 233333333344455667778888888889887
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchh--HHHH
Q 010112 331 PAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRI--GFVI 408 (518)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 408 (518)
++... .....++..++.++++.++.||+|||++++.+..++.++.+++............+. ..+.
T Consensus 305 ~~a~~------------an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~ 372 (485)
T KOG0569|consen 305 EEAQY------------ANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIA 372 (485)
T ss_pred HHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 75333 677777788888999999999999999999999999888877765543221111122 2345
Q ss_pred HHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHH
Q 010112 409 MYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIM 488 (518)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~ 488 (518)
..++....+..|+.|+.|.+.+|++|++.|+.++++..+.+++..++....+..+.+.. |- ..|+.
T Consensus 373 ~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~-------------g~-~~fil 438 (485)
T KOG0569|consen 373 AIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI-------------GP-YVFIL 438 (485)
T ss_pred HHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------cc-hhhHH
Confidence 55556667888999999999999999999999999999999999999999999998544 43 67888
Q ss_pred HHHHHHHHHHHHh-hcccCCCCChhhhcc
Q 010112 489 LGVVNFVGMICTL-CVPESKGRSLEELSR 516 (518)
Q Consensus 489 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 516 (518)
+.+.+++..+..+ ++||||+|+.+|+.+
T Consensus 439 F~i~~~~~~i~~~~~lPETkgr~~~eI~~ 467 (485)
T KOG0569|consen 439 FVIPLAIFLIYLYRYLPETKGRTPYEIIE 467 (485)
T ss_pred HHHHHHHHHHHHHHhCcccCCCCHHHHHH
Confidence 8888888888877 899999999877653
No 5
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=8.8e-40 Score=327.36 Aligned_cols=456 Identities=21% Similarity=0.270 Sum_probs=311.3
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 010112 17 TQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG 96 (518)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G 96 (518)
..+++.+.+.++.++.+.++++...+++..|.+++++. +....+.+.+..+.+++.+++.++..++++++|+++||+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~G 83 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGTVESLNTVFV--APQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFG 83 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHhHHHHHHHhc--ccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44567777888888999999999999999999998883 3455566889999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccC------CchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHH
Q 010112 97 RKKVYGITLILMVISSIASGLSFG------KSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFA 170 (518)
Q Consensus 97 rr~~~~~~~~l~~i~~~~~~~~~~------~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~ 170 (518)
||++++.+.++.+++.+.++++.- ..+...++.++++|+++|++.|...+...++++|++|+++|++++++.+.
T Consensus 84 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~ 163 (479)
T PRK10077 84 RRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQF 163 (479)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHH
Confidence 999999999999999888876310 00112256788999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccH
Q 010112 171 MQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNA 250 (518)
Q Consensus 171 ~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~ 250 (518)
+..+|.++++.++..+...... .....++||+.|++.+++.++..+..+++||+|+++.. +++.
T Consensus 164 ~~~~G~~~~~~~~~~~~~~~~~---------------~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~~~l~~-~~~~ 227 (479)
T PRK10077 164 AIIFGQLVVYFVNYFIARSGDA---------------SWLNTDGWRYMFASEAIPALLFLMLLYFVPETPRYLMS-RGKQ 227 (479)
T ss_pred HHHHHHHHHHHHHHHHhccCcc---------------cccccCChHHHHHHHHHHHHHHHHHHHcCCCCcHHHHH-cCCH
Confidence 9999999998887766532110 00134689999999888877766667789999988533 2333
Q ss_pred HHHHHHHHHHHhhhcchh-hhHhhhhhh-ccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcC
Q 010112 251 KQAAADMSKVLQVELEAE-EDKVAKLSQ-RDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGW 328 (518)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 328 (518)
+++.+...+..+.+..++ .++.++..+ +....+..+. . .............+.....++....+.|.+.++.|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~g~ 303 (479)
T PRK10077 228 EQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLM---F-GVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKTLGA 303 (479)
T ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcc---h-hHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHHcCC
Confidence 333333333222111110 001100000 0000000000 0 000001111111122222333445677888777776
Q ss_pred CCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHH
Q 010112 329 IPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVI 408 (518)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (518)
+.... ........+..+++.+++++++||+|||+.++.+.++.+++.+++...... .........
T Consensus 304 ~~~~~------------~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~---~~~~~~~~~ 368 (479)
T PRK10077 304 STDIA------------LLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYT---QAPGIVALL 368 (479)
T ss_pred CCchH------------HHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhc---CcccHHHHH
Confidence 65431 224445566677788899999999999999999998888887776543210 011112222
Q ss_pred HHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHH
Q 010112 409 MYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIM 488 (518)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~ 488 (518)
...+..........|..+.++.|.+|++.|++++|+.+...+++.++++.+.+.+.+. + ...+..++...|.+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~-~------~~~~~~~~~~~~~~ 441 (479)
T PRK10077 369 SMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKN-S------WLVAHFHNGFSYWI 441 (479)
T ss_pred HHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-c------chhhhccCccHHHH
Confidence 2222233333334567788999999999999999999999999999998888766420 0 00135577778888
Q ss_pred HHHHHHHHHHHHh-hcccCCCCChhhhcc
Q 010112 489 LGVVNFVGMICTL-CVPESKGRSLEELSR 516 (518)
Q Consensus 489 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 516 (518)
.+++++++.++.+ +.||+|+++.||.++
T Consensus 442 ~~~~~~~~~~~~~~~~~e~~~~~~~~~~~ 470 (479)
T PRK10077 442 YGCMGVLAALFMWKFVPETKGKTLEEMEA 470 (479)
T ss_pred HHHHHHHHHHHHHhccccCCCCCHHHHHH
Confidence 8887777777666 679999998887654
No 6
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.9e-41 Score=302.13 Aligned_cols=405 Identities=15% Similarity=0.157 Sum_probs=320.3
Q ss_pred hhcchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhh
Q 010112 14 VAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGD 93 (518)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~d 93 (518)
....+++|+.+++..++++...++.|..++.+.|.+.++. ++|.+|.|.+.+++.+.|.++..+.|.++|
T Consensus 20 ~~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~~----------~lsk~~lG~i~s~f~i~YG~sKf~~G~~sD 89 (448)
T COG2271 20 DKTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIEDG----------GLSKTQLGILGSAFSITYGVSKFVMGVLSD 89 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 4456778889999999999999999999999999999999 999999999999999999999999999999
Q ss_pred hcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHH
Q 010112 94 KLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (518)
Q Consensus 94 r~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 173 (518)
|.+.|+.+.++++++++.+++++++++ ++.+.++-++.|+.+|...|.+...++.|+|++|||+..++++.+-+
T Consensus 90 r~npr~fm~~gLilsai~nil~Gfs~s------~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shN 163 (448)
T COG2271 90 RSNPRYFMAFGLILSAIVNILFGFSPS------LFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHN 163 (448)
T ss_pred cCCCceeehHHHHHHHHHHHHHhhhhH------HHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhh
Confidence 999999999999999999999999998 89999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH--HHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHH-HHHhcCCCCcchhhhhhccH
Q 010112 174 FGILAGGIVA--LIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTY-YWRMRMPETARYTALVAKNA 250 (518)
Q Consensus 174 lG~~lg~~l~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~esp~~~~~~~~~~ 250 (518)
+|..+.+++. +++... .+||..|++.++++++.. +..+..+|+|+..... +.
T Consensus 164 iGGal~~~~~~la~~~~~-----------------------~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP--~i 218 (448)
T COG2271 164 IGGALAPLVALLAFFAFH-----------------------GGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLP--PI 218 (448)
T ss_pred cccchHHHHHHHHHHHhc-----------------------cchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCC--CH
Confidence 9999999998 666533 349999999999887754 4466789998763221 11
Q ss_pred HHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCC
Q 010112 251 KQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWI 329 (518)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 329 (518)
+|.++ +..+ .+.++.+.+..+.++++.+..+++ +.+|.+++..+.....=++..-|.|.|+.+ .+++
T Consensus 219 e~~~~-------d~~e---~~~~~~~~~~ls~~~i~~~YVL~N--k~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s 286 (448)
T COG2271 219 EEYRG-------DPLE---IYEEEKENEGLTAWQIFVKYVLKN--KLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFS 286 (448)
T ss_pred HHhhc-------Cchh---hhhhhccCCCccHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCC
Confidence 11111 0000 001111112246677777777766 467888888888888999999999999987 4555
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhc--cChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHH
Q 010112 330 PPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYM--GRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFV 407 (518)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (518)
... +......+=.++++|++++|+++||+ |||...-+.+.+.....++..... +.......
T Consensus 287 ~~~------------a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~-----~~~~~~l~ 349 (448)
T COG2271 287 LVK------------ANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLA-----PNGSYLLD 349 (448)
T ss_pred HHH------------HHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcC-----CCccHHHH
Confidence 544 33366777789999999999999996 677665544444333333332222 11233444
Q ss_pred HHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHH-HHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHH
Q 010112 408 IMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKA-GAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSL 486 (518)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~ 486 (518)
.+.....++.-.++.-+.-..+.|..|++..|++.|+...++++ |+..+....|++.| ..||...|
T Consensus 350 ~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d-------------~~gW~g~F 416 (448)
T COG2271 350 AILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIAD-------------TWGWDGGF 416 (448)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEe-------------cCCCcchH
Confidence 44444555555666666667788999999999999999999998 99999999999984 57999999
Q ss_pred HHHHHHHHHHHHHHh
Q 010112 487 IMLGVVNFVGMICTL 501 (518)
Q Consensus 487 ~~~~~~~~~~~~~~~ 501 (518)
+++.+.++++.++.+
T Consensus 417 i~~~~~a~l~~lll~ 431 (448)
T COG2271 417 IVLSIAALLAILLLL 431 (448)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999888888887776
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=2.7e-38 Score=308.22 Aligned_cols=402 Identities=12% Similarity=0.126 Sum_probs=280.2
Q ss_pred hHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchh
Q 010112 19 LYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRK 98 (518)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr 98 (518)
|.+|+.++.++++++++++|+..++...|.+++|+ +++..+.|++.+++.+++.+++++.|+++||+|||
T Consensus 4 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r 73 (412)
T TIGR02332 4 KLFRRLIIFLFILFIFSFLDRINIGFAGLTMGKDL----------GLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR 73 (412)
T ss_pred eehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHhhc----------CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH
Confidence 45677888888999999999999999999999999 99999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHH
Q 010112 99 KVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (518)
Q Consensus 99 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~l 178 (518)
+++..+++++++++++++++++ ++.+++.|+++|++.+...+....++.|++|+++|++++++++.+.++|.++
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~ 147 (412)
T TIGR02332 74 RWIAGIMVLWGIASTATMFATG------PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMAL 147 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC------HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 7999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHH-HHHhcCCCCcchhhhhhccHHHHHHHH
Q 010112 179 GGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTY-YWRMRMPETARYTALVAKNAKQAAADM 257 (518)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~ 257 (518)
++.+++++.+..+. ....+||+.|++.++++++.. +..+++||+|+.. +.-.+++ ++..
T Consensus 148 ~~~~~~~l~~~~~~-----------------~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~--~~l~~~~-~~~~ 207 (412)
T TIGR02332 148 GLILSGYILALDGL-----------------MALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKA--KWLDEED-KKAL 207 (412)
T ss_pred HHHHHHHHHhCCCC-----------------CCccchhHHHHHHHHHHHHHHHHHhhccCCCcccC--CCCCHHH-HHHH
Confidence 99999988632110 123579999999888776544 4456789988531 1000111 1111
Q ss_pred HHHHhhhc-chhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHh--cCCCCCcc
Q 010112 258 SKVLQVEL-EAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAI--GWIPPAAT 334 (518)
Q Consensus 258 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~ 334 (518)
.+..+.+. +.+..+ +..++.+....+.++. .++ +.++.....+++....++....+.|.++++. +.++.
T Consensus 208 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~--- 279 (412)
T TIGR02332 208 KEMIDNDQLTLEQPE-GAFAHAAMPQRSMLRE-IFT---PAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNI--- 279 (412)
T ss_pred HHHHHhccccccccc-cccccccccHHHHHHH-hcC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHH---
Confidence 11111110 000000 0000000000111111 111 2345555666666677788888999999874 23322
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH-HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHH
Q 010112 335 MNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ-MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLT 413 (518)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (518)
..........++.+++.++.++++||++||+.. .....+..++. ++.... . .......... .
T Consensus 280 ---------~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~-~~~~~~-----~-~~~~~~~~~~-~ 342 (412)
T TIGR02332 280 ---------MIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGW-LLASAT-----D-HNLIQLLGII-M 342 (412)
T ss_pred ---------HhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHH-HHHHhc-----C-CHHHHHHHHH-H
Confidence 223356667777888999999999999977753 33333333333 222111 0 1111111111 1
Q ss_pred HHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHH
Q 010112 414 FFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVN 493 (518)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (518)
...+.....+..+....|.+|++.|++++|+.+..+++|++++|.+.|.+.|..+ +|...+.+.+++.
T Consensus 343 ~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g------------~~~~~~~~~~~~~ 410 (412)
T TIGR02332 343 ASMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG------------SFNSGLWFVAALL 410 (412)
T ss_pred HHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC------------CCchhHHHHHHHH
Confidence 1222222233444566788999999999999999999999999999999985433 5787777666544
No 8
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=5e-38 Score=313.50 Aligned_cols=415 Identities=19% Similarity=0.254 Sum_probs=276.2
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCch--hhHH--HHHHHHHHHHhhhhhhhhhhhhcch
Q 010112 22 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPN--VSAA--VNGVALCGTLAGQLFFGWLGDKLGR 97 (518)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~--~~g~--~~s~~~lg~~i~~~~~G~l~dr~Gr 97 (518)
++.+..+.++.+++++|...++...|.+.++++. +.++. ..+. +.++.++++.+++++.|+++||+||
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Gr 86 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGKVFFP--------GADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGR 86 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCC--------CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 3466777889999999999999999999999832 12221 1222 2588889999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccCCchhhHH--HHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHH
Q 010112 98 KKVYGITLILMVISSIASGLSFGKSAKGVI--ATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (518)
Q Consensus 98 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG 175 (518)
|+++..++++++++++++++++++...+.+ ..++++|+++|++.|+..+...++++|++|+++||++.++...+..+|
T Consensus 87 r~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G 166 (490)
T PRK10642 87 QKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAG 166 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHH
Confidence 999999999999999999999994111100 148999999999999999999999999999999999999999988889
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHH
Q 010112 176 ILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAA 255 (518)
Q Consensus 176 ~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~ 255 (518)
..+++.+...+.....+. ...++|||++|++.++++++.+++...+||+|++...+++.+++..
T Consensus 167 ~~lg~~~~~~~~~~~~~~---------------~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~~~~~~~~~~~~~~- 230 (490)
T PRK10642 167 FVLGAGVVVLISTIVGEA---------------NFLDWGWRIPFFIALPLGIIGLYLRHALEETPAFQQHVDKLEQGDR- 230 (490)
T ss_pred HHHHHHHHHHHHHhcCHH---------------HhcCccHHHHHHHHHHHHHHHHHHHHcCCCChhHHHHHHhhhhhcc-
Confidence 888887776655322210 0125789999999877666666566678999987321111000000
Q ss_pred HHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcc
Q 010112 256 DMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAAT 334 (518)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~ 334 (518)
+..+ ++.+.+..+.+++ +++.........+.....++....+.|.++++ .|++...
T Consensus 231 --------------~~~~--~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~-- 287 (490)
T PRK10642 231 --------------EGLQ--DGPKVSFKEIATK-----HWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDH-- 287 (490)
T ss_pred --------------cccc--ccccCCHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH--
Confidence 0000 0001112222221 11222222233344556777888899998864 4654332
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHH-HhhccccccCCCchhHHHHHHHHH
Q 010112 335 MNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFA-LAIPYHHWTLKPNRIGFVIMYSLT 413 (518)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 413 (518)
+........++.+++.+++|+++||+|||+.+..+.++..++... +..... .+.........+.
T Consensus 288 ----------~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 352 (490)
T PRK10642 288 ----------GVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINS-----NVIGLIFAGLLML 352 (490)
T ss_pred ----------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhC-----CCHHHHHHHHHHH
Confidence 222445556677788889999999999999888776543332222 221110 1111222222222
Q ss_pred HHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHH
Q 010112 414 FFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVN 493 (518)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (518)
+..... ..+....+..|.+|++.|+++.|+.+....+++.++|.+.+++.+..+ ++..++.+..+.+
T Consensus 353 g~~~~~-~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~------------~~~~~~~~~~~~~ 419 (490)
T PRK10642 353 AVILNC-FTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ------------NLMMPAYYLMVVA 419 (490)
T ss_pred HHHHHH-HHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------CchHHHHHHHHHH
Confidence 221111 123344567789999999999998777788888999999999885322 4555666666667
Q ss_pred HHHHHHHhhcccCCCCCh
Q 010112 494 FVGMICTLCVPESKGRSL 511 (518)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~ 511 (518)
+++.+..+++||++++..
T Consensus 420 ~i~~~~~~~~pes~~~~~ 437 (490)
T PRK10642 420 VIGLITGVTMKETANRPL 437 (490)
T ss_pred HHHHHHHHHhccccCCCC
Confidence 777766667788866544
No 9
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1.8e-38 Score=315.21 Aligned_cols=428 Identities=13% Similarity=0.083 Sum_probs=290.7
Q ss_pred cHHHHHhhhcchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhh
Q 010112 7 TVLNALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQL 86 (518)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~ 86 (518)
+.++++.+....+..+.++..++++++..+.++..+++..|.+.+|+ +++..+.|++.+.+.+++.++++
T Consensus 13 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~~~----------~~s~~~~g~~~s~~~~~~~~~~~ 82 (467)
T PRK09556 13 DLPLEVQRKMWFKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMISTY----------GLSTTELGMIGLGFSITYGVGKT 82 (467)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHh
Confidence 34444445555666777888888999999999999999999999999 99999999999999999999999
Q ss_pred hhhhhhhhcchhhHHHHHHHHHHHHHHHhhh-----ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccc
Q 010112 87 FFGWLGDKLGRKKVYGITLILMVISSIASGL-----SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTR 161 (518)
Q Consensus 87 ~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~-----~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r 161 (518)
+.|+++||+|||+++..+.++++++++..++ +++ ++.+++.|+++|++.+...|...++++||+|+++|
T Consensus 83 ~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 156 (467)
T PRK09556 83 LVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVS------LGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKR 156 (467)
T ss_pred hhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccch------HHHHHHHHHHHHHHHhccchHHHHHHHHHcCccce
Confidence 9999999999999999998888888777665 456 79999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHH-HHhcCCCCc
Q 010112 162 GAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYY-WRMRMPETA 240 (518)
Q Consensus 162 g~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~esp 240 (518)
|+++|+...+.++|.++++.+..++..... ..+||..|.+.+++.++..+ .+++.+|+|
T Consensus 157 g~a~gi~~~~~~lG~~l~~~i~~~~~~~~~--------------------~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p 216 (467)
T PRK09556 157 GRFLGFWNISHNLGGAGAGGVALWGANYFF--------------------DGHVIGMFIFPSIIALIIGFIGLRYGSDSP 216 (467)
T ss_pred eeeEEeeecccchhhhHHHHHHHHHHHhhc--------------------cCcchhHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999998877654321 12499998887777665443 345567766
Q ss_pred chhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHH
Q 010112 241 RYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQK 320 (518)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (518)
+.. ...+.++. . .....++ + ++.++++.+..+.+++..+++ +.++...+..++....+++...|.|
T Consensus 217 ~~~--~~~~~~~~---~----~~~~~~~--~-~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~p 282 (467)
T PRK09556 217 EEL--GWGKAEEI---F----GEPISEE--D-KETESTDMTKWQIFVEYVLKN--PVIWLLCFANIFLYIVRIGIDNWSP 282 (467)
T ss_pred hhc--CCCChhhc---c----cCccchh--h-hccccccCcHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 531 11111110 0 0000000 0 000000101111112212222 2445555666666666777888999
Q ss_pred HHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccC
Q 010112 321 DIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTL 399 (518)
Q Consensus 321 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (518)
.++++ .|+++.+. ........++.+++.+++|+++||++||+.+.....+..++..++....
T Consensus 283 ~yl~~~~g~s~~~a------------~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~----- 345 (467)
T PRK09556 283 VYAFQELGFSKEDA------------INTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQH----- 345 (467)
T ss_pred HHHHHccCCCHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHh-----
Confidence 88865 66665432 2255556667888999999999999999877665444333322222211
Q ss_pred CCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHH-HHHHHHhhhHhhhhcCCCCcCCCCCCC
Q 010112 400 KPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKA-GAIVGAFGFLYAAQSKDPTKRDAGYPA 478 (518)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~~~~~~ 478 (518)
..+.....+...+ .+....+..........|.+|++.+|++.|+.+..+++ |.+++|.+.|.+.|.........++ .
T Consensus 346 ~~~~~~~~~~~~~-~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~-~ 423 (467)
T PRK09556 346 ATSEYMYLASLFA-LGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGY-T 423 (467)
T ss_pred cCcHHHHHHHHHH-HHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccc-c
Confidence 0122222122222 22222222222234567999999999999999999997 7799999999999721100000000 1
Q ss_pred cccchhHHHHHHHHHHHHHHHHhhc
Q 010112 479 GIGVKNSLIMLGVVNFVGMICTLCV 503 (518)
Q Consensus 479 ~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (518)
..+|+..|.+++++.+++.+..+++
T Consensus 424 ~~~~~~~f~~~~~~~~~~~~~~~~~ 448 (467)
T PRK09556 424 LTGWAGTFAALDIAAIGCICLMAIV 448 (467)
T ss_pred ccChHHHHHHHHHHHHHHHHHHHHH
Confidence 3479999999988888887766633
No 10
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.1e-37 Score=310.95 Aligned_cols=440 Identities=25% Similarity=0.326 Sum_probs=301.9
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhh
Q 010112 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKK 99 (518)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~ 99 (518)
..+....++.++.++..++...+++..+.+..++.- +...+.+.+..+.+++.+++.++..++++++|+++||+|||+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~ 102 (481)
T TIGR00879 25 KVALLSLIAAIGGLMFGYDTGVIGGALALPAFEFKF--TSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKK 102 (481)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhhcHHHHHhc--CCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHH
Confidence 334444555566778888999999999998888711 111222456899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHH
Q 010112 100 VYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (518)
Q Consensus 100 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg 179 (518)
++..+.+++.++.+++.+..+.. .++.++++|+++|++.+...+....++.|++|+++|++++++.+.+..+|..++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~ 179 (481)
T TIGR00879 103 SLLIIALLFVIGAILMGLAAFAL---SVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVA 179 (481)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc---chHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHH
Confidence 99999999999999996654421 156899999999999999999999999999999999999999999999999999
Q ss_pred HHHH---HHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHH
Q 010112 180 GIVA---LIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAAD 256 (518)
Q Consensus 180 ~~l~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~ 256 (518)
+.++ ... ....+||+.|++.++..++..+..+++||+|++...+ ++.++..+.
T Consensus 180 ~~~~~~~~~~-----------------------~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~ 235 (481)
T TIGR00879 180 YGFGSGKVSL-----------------------NNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGK-GRVEEARKS 235 (481)
T ss_pred HHHHHHhhcC-----------------------CCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHc-CChHHHHHH
Confidence 9988 322 1345699999997777666666677789998764222 222222222
Q ss_pred HHHHHhhhcchhh-hH--------hhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhc
Q 010112 257 MSKVLQVELEAEE-DK--------VAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIG 327 (518)
Q Consensus 257 ~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 327 (518)
..+....+.++.. .+ .+.+.+..+..+..+.+...+...+.++...+.++...........+.|.+.++.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 315 (481)
T TIGR00879 236 LARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFENAG 315 (481)
T ss_pred HHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHHcC
Confidence 2221111110000 00 00000000011111111100001122333333333333333445667788888877
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCC---Cchh
Q 010112 328 WIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLK---PNRI 404 (518)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 404 (518)
++... +........++.+++.++++++.||++||+.+..+..+.+++.+++.......... ....
T Consensus 316 ~~~~~------------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (481)
T TIGR00879 316 VSTDH------------AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGN 383 (481)
T ss_pred CCchH------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhH
Confidence 76643 23356666677778899999999999999999888887777776665321111000 0123
Q ss_pred HHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchh
Q 010112 405 GFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKN 484 (518)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~ 484 (518)
..+....+...+...+..+....+..|.+|++.|++++|+.+...+++.+++|.+.+.+.+ ..+|..
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~-------------~~~~~~ 450 (481)
T TIGR00879 384 VAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE-------------SIGVGG 450 (481)
T ss_pred HHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hcCccc
Confidence 3333344444455555667788888999999999999999999999999999999999984 457888
Q ss_pred HHHHHHHHHHHHHHHHh-hcccCCCCChhh
Q 010112 485 SLIMLGVVNFVGMICTL-CVPESKGRSLEE 513 (518)
Q Consensus 485 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 513 (518)
.|++.+++++++.+..+ +.||+++++.+|
T Consensus 451 ~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 480 (481)
T TIGR00879 451 VFIFFGGLNVLGLIFVYFFLPETKGRTLEE 480 (481)
T ss_pred eehhHHHHHHHHHHHHheecccCCCCChhh
Confidence 88888888888887776 678887776544
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=5.9e-37 Score=301.42 Aligned_cols=409 Identities=13% Similarity=0.099 Sum_probs=283.2
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc
Q 010112 16 KTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL 95 (518)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~ 95 (518)
+.+++++.++....++.+..++++..++...|.+.+++ |+|..+.|++.+.+.+++.+++++.|+++||+
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~ 85 (434)
T PRK11663 16 RYRYWRRHILITMYLGYALFYFTRKSFNAAMPEMLADL----------GLSRSDIGLLATLFYITYGVSKFVSGIVSDRS 85 (434)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhc
Confidence 34456667777778888888999999999999999999 99999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHH
Q 010112 96 GRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (518)
Q Consensus 96 Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG 175 (518)
|||+++.++.++.++++++++++++ ++.+++.|++.|++.|...+...+++.|++|+++|++++++.+.+.++|
T Consensus 86 g~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g 159 (434)
T PRK11663 86 NARYFMGIGLIATGIINILFGFSSS------LWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVG 159 (434)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHH-HHHHhcCCCCcchhhhhhccHHHHH
Q 010112 176 ILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALT-YYWRMRMPETARYTALVAKNAKQAA 254 (518)
Q Consensus 176 ~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~ 254 (518)
..+++.+++++.+. ++||+.|++.++++++. ++..+++||+|++....+.+ ++..
T Consensus 160 ~~~~~~~~~~l~~~-----------------------~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~-~~~~ 215 (434)
T PRK11663 160 GALIPLVVGAIALH-----------------------YGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVG-EWRH 215 (434)
T ss_pred HHHHHHHHHHHHHc-----------------------ccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcc-cccc
Confidence 99999999988743 44999999988776654 33445678877542111100 0000
Q ss_pred HHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCc
Q 010112 255 ADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAA 333 (518)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~ 333 (518)
+ .++.+ ++.+..+.+.++.++....++ +.++......+.....++....+.|.++. +.|+++.+.
T Consensus 216 ~-----------~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 281 (434)
T PRK11663 216 D-----------ALELA-QQQEGAGLSRKEILTKYVLLN--PYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTA 281 (434)
T ss_pred c-----------ccccc-hhccccCCChhhhHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHH
Confidence 0 00000 000000011122222211221 23344444445555556667778888885 457766542
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhc--cChhHH-HHHHHHHHHHHHHHhhccccccCCCchhHHHHHH
Q 010112 334 TMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYM--GRFAIQ-MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMY 410 (518)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (518)
........++.+++.++.|++.||+ ++|+.. ........+....+..... .+ .......
T Consensus 282 ------------~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~ 343 (434)
T PRK11663 282 ------------NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF-----AS-YVMQAAC 343 (434)
T ss_pred ------------HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc-----cc-HHHHHHH
Confidence 2255566677888999999999998 333332 2222222222211111110 01 1112122
Q ss_pred HHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHH
Q 010112 411 SLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLG 490 (518)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 490 (518)
.+..++...+..........|.+|++.|++++|+.++..++|++++|.+.|++.| ..||+..|.+.+
T Consensus 344 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~-------------~~g~~~~f~~~~ 410 (434)
T PRK11663 344 FFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLE-------------IWHWTGFFVVIS 410 (434)
T ss_pred HHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHH-------------hcccHHHHHHHH
Confidence 2222222222222333466899999999999999999999999999999999984 568889999998
Q ss_pred HHHHHHHHHHh-hcccCCCC
Q 010112 491 VVNFVGMICTL-CVPESKGR 509 (518)
Q Consensus 491 ~~~~~~~~~~~-~~~~~~~~ 509 (518)
++.+++.+..+ ..++++++
T Consensus 411 ~~~~~~~~~~~~~~~~~~~~ 430 (434)
T PRK11663 411 IAAGISALLLLPFLNAQAPR 430 (434)
T ss_pred HHHHHHHHHHHHHHhhhchh
Confidence 88888776665 44444443
No 12
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=2.6e-36 Score=295.62 Aligned_cols=387 Identities=17% Similarity=0.239 Sum_probs=286.8
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc
Q 010112 16 KTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL 95 (518)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~ 95 (518)
+..+++|.++.++++..+.++++....+...|.+.+++ +.++.+.+++.+.+.++..+++++.|+++||+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 77 (406)
T PRK11551 8 ASSSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQEF----------GLDVAQMGWAFSAGILGLLPGALLGGRLADRI 77 (406)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34457888888899999999999999999999999999 99999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHH
Q 010112 96 GRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (518)
Q Consensus 96 Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG 175 (518)
|||+++..+.++..++.+++.++++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|
T Consensus 78 g~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g 151 (406)
T PRK11551 78 GRKRILIVSVALFGLFSLATAQAWD------FPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFG 151 (406)
T ss_pred CCchhHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988 7999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHH-HHhcCCCCcchhhhhhccHHHHH
Q 010112 176 ILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYY-WRMRMPETARYTALVAKNAKQAA 254 (518)
Q Consensus 176 ~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~ 254 (518)
..+++.++..+.+ ..+||+.|++.++..++..+ ...++||+|++. ++++.++..
T Consensus 152 ~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~ 206 (406)
T PRK11551 152 GALASVIGVLAAG-----------------------DAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFA--QAAGAGKQR 206 (406)
T ss_pred HHHHHHHHHHHcc-----------------------ccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHH--hccCcchhh
Confidence 9999999877753 34599999987766555443 345678887642 111100000
Q ss_pred HHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcc
Q 010112 255 ADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAAT 334 (518)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 334 (518)
+.. ....++++..+ ..+......+.....++....+.|.++++.|+++.+.+
T Consensus 207 ~~~------------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~ 258 (406)
T PRK11551 207 APV------------------------LRALFGEGRAT----ATLLLWISYFFTLIVLYFLLNWLPSLLVGQGLSRSQAG 258 (406)
T ss_pred hhh------------------------HHHHhhhhhhh----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhhhh
Confidence 000 00001111111 11112222333334455566778888888777766533
Q ss_pred hhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHH
Q 010112 335 MNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTF 414 (518)
Q Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (518)
. ......++.+++.++.+++.||+|||+.+..+....+++.+++.... +..... +..+..
T Consensus 259 ~------------~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~ 318 (406)
T PRK11551 259 L------------VQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAP-------SFAGML-LAGFAA 318 (406)
T ss_pred H------------HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcC-------cHHHHH-HHHHHH
Confidence 2 55666677888999999999999999998876666555555443332 122222 222222
Q ss_pred HHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHH
Q 010112 415 FFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNF 494 (518)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 494 (518)
++...+..+..+++..|.+|++.|+++.|+.+...++|..++|.+.|.+.+..+ ++...+.....+.+
T Consensus 319 g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~------------~~~~~~~~~~~~~~ 386 (406)
T PRK11551 319 GLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR------------STVGVIGASIPVIL 386 (406)
T ss_pred HHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC------------chHHHHHHHHHHHH
Confidence 333333456677888999999999999999999999999999999999985322 55566666666666
Q ss_pred HHHHHHhhc
Q 010112 495 VGMICTLCV 503 (518)
Q Consensus 495 ~~~~~~~~~ 503 (518)
++.++.+++
T Consensus 387 ~~~~~~~~~ 395 (406)
T PRK11551 387 VAALAALLL 395 (406)
T ss_pred HHHHHHHHH
Confidence 666665543
No 13
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=5.6e-37 Score=308.78 Aligned_cols=384 Identities=20% Similarity=0.323 Sum_probs=280.6
Q ss_pred HHHhhhhhhhcccCCCCCCCCCC---chhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccC
Q 010112 44 LVTKLLGRIYYHVDGAKKPGTLP---PNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFG 120 (518)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s---~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~ 120 (518)
+..|.+.+|+ +++ +.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.++.+++++
T Consensus 110 ~~~~~i~~e~----------~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~ 179 (505)
T TIGR00898 110 TFSSTIVTEW----------DLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPN 179 (505)
T ss_pred cccccEEEEe----------cceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHccc
Confidence 5667788888 888 899999999999999999999999999999999999999999999999999999
Q ss_pred CchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 010112 121 KSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYS 200 (518)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~ 200 (518)
++.++++|++.|++.+...+....++.|++|+++|+++.++...+..+|.++++.++..+.+
T Consensus 180 ------~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~------------ 241 (505)
T TIGR00898 180 ------YTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD------------ 241 (505)
T ss_pred ------HHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH------------
Confidence 79999999999999999999999999999999999999999999999999999988876631
Q ss_pred CCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhH---h--hhh
Q 010112 201 VDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDK---V--AKL 275 (518)
Q Consensus 201 ~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~ 275 (518)
||+.|++.+++.++..+..+++||+|+|+. .+++.+++.+.+++..+.+.....++ . ++.
T Consensus 242 --------------wr~~~~~~~i~~~~~~~~~~~~~esp~~l~-~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~ 306 (505)
T TIGR00898 242 --------------WRWLQLAVSLPTFLFFLLSWFVPESPRWLI-SQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKD 306 (505)
T ss_pred --------------HHHHHHHHHHHHHHHHHHHHhcCCChHHHH-HCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhh
Confidence 999999998888777766778999999973 33444555555544433222111100 0 010
Q ss_pred h---hccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHH
Q 010112 276 S---QRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIA 352 (518)
Q Consensus 276 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (518)
. +.+.+.+++++++..+. ..+.....++.....+++...+.+.+ +.+ ........
T Consensus 307 ~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~---------------~~~~~~~~ 364 (505)
T TIGR00898 307 LSSSKKQYSFLDLFRTPNLRK---TTLCLMMLWFTTAFSYYGLVLDLGNL----GGN---------------IYLDLFIS 364 (505)
T ss_pred hhhccCCCcHHHHhCChHHHH---HHHHHHHHHHHHHHHHHHHhcccccc----CCC---------------hHHHHHHH
Confidence 0 11123334444444333 23333444555555555544433321 111 01133344
Q ss_pred HhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccc
Q 010112 353 LCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEI 432 (518)
Q Consensus 353 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (518)
.+..+++.++.+++.||+|||+.+..+.++.+++.+++..... ...........+..++ .....+..+.+..|.
T Consensus 365 ~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 365 GLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPV-----DLYFLRTALAVLGKFG-ITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCC-----CchHHHHHHHHHHHHH-HHHHHHHHHHHhccc
Confidence 5667778889999999999999999988888887776655431 1112222222222222 222345667888999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccCCCCChh
Q 010112 433 FPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPESKGRSLE 512 (518)
Q Consensus 433 ~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (518)
+|++.|++++|+.++...+|++++|.+.+ +. ..++..++.+++++.+++.+..+++||+++++++
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~~lpet~~~~l~ 503 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LG--------------EKWLFLPLVLFGGLALLAGILTLFLPETKGVPLP 503 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH--------------HHHHhhHHHHHHHHHHHHHHHHHcCcCCCCCCCC
Confidence 99999999999999999999999999998 43 2355677888888888888887889999988776
Q ss_pred h
Q 010112 513 E 513 (518)
Q Consensus 513 ~ 513 (518)
|
T Consensus 504 ~ 504 (505)
T TIGR00898 504 E 504 (505)
T ss_pred C
Confidence 5
No 14
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=4.6e-36 Score=295.00 Aligned_cols=408 Identities=18% Similarity=0.206 Sum_probs=269.2
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhh-hhhhhcccCCCCCCCCCCchhhHHHH-----HHHHHHHHhhhhhhhhhhh
Q 010112 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAKKPGTLPPNVSAAVN-----GVALCGTLAGQLFFGWLGD 93 (518)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~-----s~~~lg~~i~~~~~G~l~d 93 (518)
++++.+....++.+.+++|...++.+.|. +.+++++ +.++. .+++. ++.+++..+++++.|+++|
T Consensus 19 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~D 89 (438)
T PRK09952 19 RARRAALGSFAGAVVDWYDFLLYGITAALVFNREFFP--------QVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGD 89 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------CCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44567778888999999999999988875 5555533 34444 35443 4556778899999999999
Q ss_pred hcchhhHHHHHHHHHHHHHHHhhhccCCchhhH--HHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHH
Q 010112 94 KLGRKKVYGITLILMVISSIASGLSFGKSAKGV--IATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAM 171 (518)
Q Consensus 94 r~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~ 171 (518)
|+|||+++..+.++++++++++++++++...+. +..++++|+++|++.|...+....++.|++|+++|++..+..+.+
T Consensus 90 r~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g 169 (438)
T PRK09952 90 RLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVG 169 (438)
T ss_pred hhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHH
Confidence 999999999999999999999999999311000 115888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHH
Q 010112 172 QGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAK 251 (518)
Q Consensus 172 ~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~ 251 (518)
..+|.+++..+...+....+.. ....++||++|++.+++.++...+....||+|++...+.+. +
T Consensus 170 ~~~G~~l~~~~~~~l~~~~~~~---------------~~~~~gWr~~f~~~~~~~l~~~~l~~~~~es~~~~~~~~~~-~ 233 (438)
T PRK09952 170 YGVGLLLSTGLVSLISMMTTDE---------------QFLSWGWRIPFLFSIVLVLIALWVRNGMEESAEFEQQQHEQ-A 233 (438)
T ss_pred HHHHHHHHHHHHHHHHHhCCHH---------------HhhccChHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHhhc-c
Confidence 9999999888777765433210 01246799999998877666555555678887652111000 0
Q ss_pred HHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCC
Q 010112 252 QAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIP 330 (518)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~ 330 (518)
+. +++.+.. +.. +++++.........++....++....+.|.++++ .|+++
T Consensus 234 ~~-----------------------~~~~~~~----~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~ 285 (438)
T PRK09952 234 AA-----------------------KKRIPVI----EAL-LRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPR 285 (438)
T ss_pred cc-----------------------cccCCHH----HHH-HHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 00 0000000 001 1111122222223334445666666777777654 44443
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHH
Q 010112 331 PAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMY 410 (518)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (518)
.. . ........+..+++.++.|+++||+|||+.+..+.++..++.+.+..... ..+....+...
T Consensus 286 ~~-----------~-~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 349 (438)
T PRK09952 286 EL-----------F-LNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALE----AQSIFWIVFFS 349 (438)
T ss_pred HH-----------H-HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHH----cCChHHHHHHH
Confidence 21 0 11222334455667788999999999999888776665544433322110 01112222222
Q ss_pred HHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHH-HHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHH
Q 010112 411 SLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGK-AGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIML 489 (518)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 489 (518)
.+..++......+..+++..|.+|++.|+++.|+.+..+. +++.++|.+.+++.+..+ .+|...+.+.
T Consensus 350 ~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-----------~~~~~~~~~~ 418 (438)
T PRK09952 350 IMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-----------GSWHSVAIYL 418 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-----------CCchHHHHHH
Confidence 2222222222345567888999999999999999776655 899999999999986332 2477778888
Q ss_pred HHHHHHHHHHHhhcccCC
Q 010112 490 GVVNFVGMICTLCVPESK 507 (518)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~ 507 (518)
+++.+++.+..+.++|++
T Consensus 419 ~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 419 LAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHccccc
Confidence 888888877777666643
No 15
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=6e-36 Score=294.30 Aligned_cols=422 Identities=20% Similarity=0.244 Sum_probs=267.9
Q ss_pred CCCccccHHHHHhhhcchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhH---HHHHHH
Q 010112 1 MAGDQLTVLNALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSA---AVNGVA 77 (518)
Q Consensus 1 m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g---~~~s~~ 77 (518)
|+|+..+.+++.... ..+++++.+..++++.+++++|+..++...|.+.+++++. +.+..+.+ .+.+..
T Consensus 1 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~~-------~~~~~~~~~~~~~~~~~ 72 (432)
T PRK10406 1 MAESTVTADSKLTSS-DTRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAHIFFPS-------GNTTTQLLQTAGVFAAG 72 (432)
T ss_pred CCccccccccccCCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-------CCchHHHHHHHHHHHHH
Confidence 555555544443332 2334555667777889999999999999999999998320 23444443 444555
Q ss_pred HHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCch--hhHHHHHHHHHHHhhhccccccchhhHHhhhh
Q 010112 78 LCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSA--KGVIATLCFFRFWLGFGIGGDYPLSATIMSEY 155 (518)
Q Consensus 78 ~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~ 155 (518)
+++..++++++|+++||+|||+++..++++++++++++++++++.. ......++++|+++|++.|...+...++++|+
T Consensus 73 ~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~ 152 (432)
T PRK10406 73 FLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEV 152 (432)
T ss_pred HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHh
Confidence 5556699999999999999999999999999999999999988421 01124689999999999999999999999999
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhc
Q 010112 156 ANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMR 235 (518)
Q Consensus 156 ~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 235 (518)
+|+++|+++.++.+.+...|.++++.+...+....... ....+|||++|++.++++++...+...
T Consensus 153 ~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~---------------~~~~~gWr~~F~i~~~~~ll~~~~~~~ 217 (432)
T PRK10406 153 AVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDA---------------ELREWGWRIPFALGAVLAVVALWLRRQ 217 (432)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHH---------------HHhccchHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999888888888887766654322110 012467999999988887776655566
Q ss_pred CCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhH
Q 010112 236 MPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQ 315 (518)
Q Consensus 236 ~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (518)
+||+|++. + +.. ++..+.++.++++ +.........+.....++..
T Consensus 218 ~~e~~~~~--~-----~~~----------------------~~~~~~~~l~~~~------~~~~~~~~~~~~~~~~~~~~ 262 (432)
T PRK10406 218 LDETSQQE--T-----RAL----------------------KEAGSLKGLWRNR------RAFIMVLGFTAAGSLCFYTF 262 (432)
T ss_pred CCCCchHH--H-----hhh----------------------cccccHHHHHhhH------HHHHHHHHHHHHHHHHHHHH
Confidence 78876531 0 000 0000112222211 11111222222334566777
Q ss_pred HhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcc
Q 010112 316 NLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPY 394 (518)
Q Consensus 316 ~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (518)
..|.|.++.+ .|++..+ .+. ......+...++.++.|+++||++||+.+.....+.++....+....
T Consensus 263 ~~~lp~~l~~~~g~s~~~-----------~~~-~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~ 330 (432)
T PRK10406 263 TTYMQKYLVNTAGMHANV-----------ASG-IMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSAL 330 (432)
T ss_pred HHHHHHHHHHhcCCCHHH-----------HHH-HHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHH
Confidence 7888988765 4554332 111 33333344456677889999999999987766554433332221111
Q ss_pred ccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHH-HHHHHHhhhHhhhhcCCCCcCC
Q 010112 395 HHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKA-GAIVGAFGFLYAAQSKDPTKRD 473 (518)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~~~~~~~ 473 (518)
. ...+......+..+..+.... ..+..+.+.+|.+|++.|+++.|+.+..+++ .+...|.+.+.+ +..+
T Consensus 331 ~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g----- 400 (432)
T PRK10406 331 Q---NVSSPYAAFGLVMCALLIVSF-YTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIG----- 400 (432)
T ss_pred H---cCCcHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhC-----
Confidence 0 001112111112111111111 1234557789999999999999999988774 345577777755 3222
Q ss_pred CCCCCcccchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 010112 474 AGYPAGIGVKNSLIMLGVVNFVGMICTLCVPESKGRS 510 (518)
Q Consensus 474 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (518)
.+...+++.++..+++.+..+++ ++++|+
T Consensus 401 -------~~~~~~~~~~~~~~i~~~~~~~l-~~~~~~ 429 (432)
T PRK10406 401 -------METAFFWYVTLMAVVAFLVSLML-HRKGKG 429 (432)
T ss_pred -------CCcHHHHHHHHHHHHHHHHHHHh-hhcccc
Confidence 35555666666666666655554 334443
No 16
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=9.9e-36 Score=293.46 Aligned_cols=370 Identities=21% Similarity=0.251 Sum_probs=261.5
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcch
Q 010112 18 QLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGR 97 (518)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Gr 97 (518)
++++++.+..+.++.+.+++++....+..|.+++++ |+++.+.+++.+++.+++.+++++.|+++||+||
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~ 82 (426)
T PRK12307 13 TRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADL----------GLTDMEGAFLATAAFIGRPFGGALFGLLADKFGR 82 (426)
T ss_pred CHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 356677778888999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHH
Q 010112 98 KKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (518)
Q Consensus 98 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~ 177 (518)
|+++..+.++.++++++++++++ ++.++++|+++|++.+...+....++.|++|+++|+++.++...+..+|.+
T Consensus 83 r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~ 156 (426)
T PRK12307 83 KPLMMWSIVAYSVGTGLSGLASG------VIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNI 156 (426)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHH
Confidence 99999999999999999999988 799999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHH
Q 010112 178 AGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADM 257 (518)
Q Consensus 178 lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~ 257 (518)
+++.+...+.+ ..+||+.|++.++..++........||++++.. ++. ++
T Consensus 157 ~~~~l~~~l~~-----------------------~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~--~~~-~~----- 205 (426)
T PRK12307 157 IAAYFMPSFAE-----------------------AYGWRAAFFVGLLPVLLVIYIRARAPESKEWEE--AKL-SG----- 205 (426)
T ss_pred HHHHHHHHHcc-----------------------cCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHH--hhh-hc-----
Confidence 99988877753 345999998865444433333333566544310 000 00
Q ss_pred HHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhh
Q 010112 258 SKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNA 337 (518)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 337 (518)
+.+++.+.. +....+.++.++++..+ .........+......+....+.|.++++.|+++..
T Consensus 206 ------~~~~~~~~~---~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----- 267 (426)
T PRK12307 206 ------KGKHSQSAW---SVFSLSMKGLFNRAQFP----LTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGV----- 267 (426)
T ss_pred ------cccccccch---hhhhHHHHHHHhhchHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-----
Confidence 000000000 00000112222222221 111112222222223334556778887776665433
Q ss_pred hHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHH
Q 010112 338 IHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFA 417 (518)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (518)
.........++.+++.++.+++.||++||+.+..+.++..+..+.+..... ..........+.....
T Consensus 268 -------~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 334 (426)
T PRK12307 268 -------VSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQ------DNYLLLGACLFGLMAT 334 (426)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcc------ccHHHHHHHHHHHHHh
Confidence 122445566778888999999999999999988887766655544432221 1111121222222222
Q ss_pred hcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 418 NFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
..+..+....++.|.+|++.|++++|+.+...++++.++|.+.|++.+
T Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~ 382 (426)
T PRK12307 335 NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGI 382 (426)
T ss_pred cccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHH
Confidence 223334455677899999999999999999999999999999999984
No 17
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.3e-35 Score=271.93 Aligned_cols=377 Identities=14% Similarity=0.136 Sum_probs=288.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchh
Q 010112 19 LYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRK 98 (518)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr 98 (518)
+..+..++.+.++.|..+.+......++|++.+|+ ++|..+.|++.+.|.++.++++++...+.||+.||
T Consensus 9 ~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~dl----------~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr 78 (394)
T COG2814 9 KPMWLALLALALAAFAIGTTEFVPVGLLPPIAADL----------GVSEGAAGQLITAYALGVALGAPLLALLTGRLERR 78 (394)
T ss_pred ccchHHHHHHHHHHHHHHhHHHHHHhchHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH
Confidence 34456677888889999999999999999999999 99999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHH
Q 010112 99 KVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (518)
Q Consensus 99 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~l 178 (518)
++++..+.++.++++++++++| |+.++++|++.|++.|..++...++..+..|+++|++++++...+..++.++
T Consensus 79 ~lLl~~l~lFi~~n~l~alAp~------f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~ 152 (394)
T COG2814 79 RLLLGLLALFIVSNLLSALAPS------FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVL 152 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999 8999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHH
Q 010112 179 GGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADM 257 (518)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~ 257 (518)
|.+++.++.+.++ ||..|+..+.++++..+. +..+| |+.. .++.+.+.+
T Consensus 153 GvPLGt~ig~~~G-----------------------WR~~F~~ia~l~ll~~~~~~~~lP--~~~~--~~~~~~~~~--- 202 (394)
T COG2814 153 GVPLGTFLGQLFG-----------------------WRATFLAIAVLALLALLLLWKLLP--PSEI--SGSLPGPLR--- 202 (394)
T ss_pred hccHHHHHHHHhh-----------------------HHHHHHHHHHHHHHHHHHHHHhCC--CccC--CCCCCcchh---
Confidence 9999999987666 999999999998887655 56678 2210 000000000
Q ss_pred HHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchh
Q 010112 258 SKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMN 336 (518)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~ 336 (518)
+..+.++++. ++......++.....|....|...+++ ..|++++..+.
T Consensus 203 -----------------------~~~~~l~~p~-------v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~- 251 (394)
T COG2814 203 -----------------------TLLRLLRRPG-------VLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSL- 251 (394)
T ss_pred -----------------------HHHHHhcCch-------HHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHH-
Confidence 0111122222 222222223333344444445544444 46777665443
Q ss_pred hhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHH
Q 010112 337 AIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFF 416 (518)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (518)
..+.++++.++|+.++|++.|| +.|+.+.....+..+.++.+.+... +.........+.++.
T Consensus 252 -----------~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~------~~~~~~~~~~~wg~a 313 (394)
T COG2814 252 -----------VLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGA------SPALALALLFLWGFA 313 (394)
T ss_pred -----------HHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcc------hHHHHHHHHHHHHHH
Confidence 7888899999999999999999 8888888887888877777766552 222222222222222
Q ss_pred HhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHH
Q 010112 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVG 496 (518)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 496 (518)
... ..........+ .-++.++.+.+++....|+|..+|..+.|.+.| +.|+....++.+.+.+++
T Consensus 314 ~~~-~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~-------------~~g~~~~~~~~a~l~~~a 378 (394)
T COG2814 314 FSP-ALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLD-------------ALGYAATGWVGAALLLLA 378 (394)
T ss_pred hhh-hhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hhchHHHHHHHHHHHHHH
Confidence 211 11222233334 236779999999999999999999999999994 578999999999999999
Q ss_pred HHHHhhccc
Q 010112 497 MICTLCVPE 505 (518)
Q Consensus 497 ~~~~~~~~~ 505 (518)
.++.+....
T Consensus 379 ~~~~~~~~~ 387 (394)
T COG2814 379 LLLALLSAR 387 (394)
T ss_pred HHHHHHHHh
Confidence 888774433
No 18
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=1.4e-34 Score=255.10 Aligned_cols=434 Identities=21% Similarity=0.381 Sum_probs=331.2
Q ss_pred HHHHhhhcchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhh
Q 010112 9 LNALDVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFF 88 (518)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~ 88 (518)
+++++...+.+++|...+....+...+.......+.+.|.+.+.+ +.+..+..++......|..+++..+
T Consensus 64 ~ea~~aigfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~~w----------~~s~~q~~llt~~v~~gmllga~~w 133 (528)
T KOG0253|consen 64 DEAMNAIGFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDEVW----------GPSEGQAPLLTLSVFLGMLVGAMVW 133 (528)
T ss_pred hhhhhhcCcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHhhh----------chhhhhhhHHHHHHHhhhhhhhhhh
Confidence 345666778899999999999998888888888888999999999 9999999999999999999999999
Q ss_pred hhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHH
Q 010112 89 GWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAV 168 (518)
Q Consensus 89 G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~ 168 (518)
|..+|++|||+.+.+..+..++...+.+.++| +..+++.|.+.|+|.|+ .|...++-.|..|..+|+..+-..
T Consensus 134 ~l~~d~~grr~~f~~T~l~t~v~~~is~~spn------f~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~ 206 (528)
T KOG0253|consen 134 GLSADTIGRRKGFNLTFLVTGVFGVISGASPN------FASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS 206 (528)
T ss_pred heehhhhhcchhhhhhHHHHHHHHHhhcCCCC------eehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH
Confidence 99999999999999999999999999999999 79999999999999999 899999999999999999888777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhc
Q 010112 169 FAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAK 248 (518)
Q Consensus 169 ~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~ 248 (518)
..+.+|.+....++..+...++ |||.......+..+.....+++||||+++ ..++
T Consensus 207 -~~waig~v~ea~law~vm~~~g-----------------------wr~~l~~~~~pl~~~a~f~~w~~ESpRf~-~~~G 261 (528)
T KOG0253|consen 207 -FFWAIGQVFEALLAWGVMSNFG-----------------------WRYLLFTSSTPLMFAARFLVWVYESPRFY-LAKG 261 (528)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhh-----------------------HHHHHHHHHhHHHHHHHHHhhcccCcchh-hhcC
Confidence 8899999999999998875554 99999988888888888888999999997 5566
Q ss_pred cHHHHHHHHHHHHhhhcch-----------hhhHhhh----------hhhccCCcccchhhhhhhhhhhHHHHHHHHHHH
Q 010112 249 NAKQAAADMSKVLQVELEA-----------EEDKVAK----------LSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFL 307 (518)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~-----------~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (518)
+++++.+.++++.+.+..+ ++++.++ .++...+..+++..+ +|+ ..+.....|+.
T Consensus 262 ~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~-lrk---ttlllw~iwfg 337 (528)
T KOG0253|consen 262 DDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPK-LRK---TTLLLWRIWFG 337 (528)
T ss_pred ChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChH-HHH---HHHHHHHHHHh
Confidence 7777777777766543211 0001000 011112233444333 333 34556677788
Q ss_pred HHHHHHhHHhhHHHHHHHhc---CC----CCCcchh-hhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHH
Q 010112 308 LDIAFYSQNLFQKDIFSAIG---WI----PPAATMN-AIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMG 379 (518)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~g---~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 379 (518)
+...||+...+...+++... .. +.+.... ...........-.+...+..++|.++.++++||+|||+.+...
T Consensus 338 nafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~ 417 (528)
T KOG0253|consen 338 NAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALS 417 (528)
T ss_pred hHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHH
Confidence 88899998888777766522 11 1111100 0001111223345566678899999999999999999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 010112 380 FFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFG 459 (518)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 459 (518)
+++.+++.+++..... .-...++.+..-.+.+. ...+.|+|+.|++|+..|+++.|.++..+++|+++.|++
T Consensus 418 l~~f~iflfll~~c~~-------rn~~tvllf~arafisg-~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~i 489 (528)
T KOG0253|consen 418 LILFGIFLFLLTTCKT-------RNAYTVLLFTARAFISG-AFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVI 489 (528)
T ss_pred HHHHHHHHHHHHHhcC-------cchhHHHHHHHHHHHhc-hheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHH
Confidence 9999888888776652 12222333332233333 456889999999999999999999999999999999999
Q ss_pred hHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcc-cCCCCCh
Q 010112 460 FLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVP-ESKGRSL 511 (518)
Q Consensus 460 ~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 511 (518)
. ...+ ..-..+..+.+++++++.+...++| |+|+|+.
T Consensus 490 A-~~~e--------------~s~sl~i~vy~~~~ilagIavcffPiEtkGR~l 527 (528)
T KOG0253|consen 490 A-MRAE--------------LSTSLPIFVYGALFILAGIAVCFFPIETKGRSL 527 (528)
T ss_pred H-HHhc--------------cceeehHHHHHHHHHHHHHHheeeeeccCCCCC
Confidence 8 4332 2445677888888899888888655 8888864
No 19
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=2.8e-35 Score=288.69 Aligned_cols=384 Identities=17% Similarity=0.223 Sum_probs=270.1
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 010112 17 TQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG 96 (518)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G 96 (518)
.++++|+.+..++++.+.++++....+++.|.+.+++ +++..+.+++.+++.++..+++++.|.++||+|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g 75 (405)
T TIGR00891 6 LTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAGEF----------GLTTVDAASLISAALISRWFGALMFGLWGDRYG 75 (405)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 4567788888999999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHH
Q 010112 97 RKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (518)
Q Consensus 97 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~ 176 (518)
||+++..+.++.++++++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+.+..+|.
T Consensus 76 ~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~ 149 (405)
T TIGR00891 76 RRLPMVTSIVLFSAGTLACGFAPG------YITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGA 149 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHH
Confidence 999999999999999999999988 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHH
Q 010112 177 LAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAAD 256 (518)
Q Consensus 177 ~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~ 256 (518)
.+++.+++.+.+..+ .+||+.|++.+++.++..+....+||++++.+.+ +++++..+.
T Consensus 150 ~~~~~l~~~l~~~~~---------------------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 207 (405)
T TIGR00891 150 VVAAQVYSLVVPVWG---------------------DGWRALFFISILPIIFALWLRKNIPEAEDWKEKH-AGKALVRTM 207 (405)
T ss_pred HHHHHHHHHHHHhcC---------------------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHh-hhhhhhhhH
Confidence 999999988874332 2399999987776666665566788877652111 111111111
Q ss_pred HHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcch
Q 010112 257 MSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATM 335 (518)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 335 (518)
..+..+.+.. ..+.. ++.....+... ++.+......................+.|.++.+ .|+++.+.+
T Consensus 208 ~~~~~~~~~~-~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~- 277 (405)
T TIGR00891 208 VDILYGGEHR-IANIV-------MTLAAAMVQSA-GKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVA- 277 (405)
T ss_pred HHHHhccchh-hhhhh-------hhhhHHhhhhh-hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHH-
Confidence 1111100000 00000 00000011111 1111112222222222233333445566666653 566544322
Q ss_pred hhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHH
Q 010112 336 NAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFF 415 (518)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (518)
.......++.+++.++.+++.||++||+.+..+.....+......... .+.........+. +
T Consensus 278 -----------~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~-~ 339 (405)
T TIGR00891 278 -----------NIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIG------ANVAVLGLGLFFQ-Q 339 (405)
T ss_pred -----------HHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhC------CchHHHHHHHHHH-H
Confidence 245566677888999999999999999988877665533332222111 1112222221222 2
Q ss_pred HHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhc
Q 010112 416 FANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQS 466 (518)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 466 (518)
....+..+....+..|.+|++.|++++|+.+...+++..++|.+.|.+.|.
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~ 390 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQR 390 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 223334456667889999999999999999999999999999999999953
No 20
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=100.00 E-value=3.6e-35 Score=293.93 Aligned_cols=434 Identities=23% Similarity=0.306 Sum_probs=315.9
Q ss_pred HHHHHHHHHHHHHhhhhhh--hHHHHHHHhhhhhhhcccCCCCCCCCCCc--hhhHHHHHHHHHHHHhhhhhhhhhhhhc
Q 010112 20 YHFTAIVIAGMGFFTDAYD--LFCISLVTKLLGRIYYHVDGAKKPGTLPP--NVSAAVNGVALCGTLAGQLFFGWLGDKL 95 (518)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~lg~~i~~~~~G~l~dr~ 95 (518)
..........++.+..+++ ....+++...+.++.-. .+...+. .+.+++.+...++..+++++.|+++|++
T Consensus 42 ~~~~~~~~~~~~~~~fg~~g~~g~~s~~~~~~~~~~~~-----~~~~~~~~~~~~s~~~s~~~lga~~g~l~~g~l~d~~ 116 (513)
T KOG0254|consen 42 FVILLALVAALGGLLFGYDGDIGGISGALDFLQRFASL-----YDLSTGEYSVRQGLLTSILNLGALVGSLLAGRLGDRI 116 (513)
T ss_pred ehHHHHHHHHHHHHHhCcccccccchhhHHHHHhcccc-----cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344455556667777775 55666676666654411 1112222 5679999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHH
Q 010112 96 GRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (518)
Q Consensus 96 Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG 175 (518)
|||+.++++.++..++.++++++++ +.+++++|+++|+|.|....+.+.+++|..|++.||...+..+....+|
T Consensus 117 GRk~~l~~~~~~~~iG~ii~~~a~~------~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~G 190 (513)
T KOG0254|consen 117 GRKKTLLLAVVLFLIGAIIIALAPS------WYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIG 190 (513)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhh------HHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999 8999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHH
Q 010112 176 ILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAA 255 (518)
Q Consensus 176 ~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~ 255 (518)
..++..++....+ ..++||..+.+..+++++..+..+++||||+|+ .++++.+++++
T Consensus 191 i~~~~~~~~~~~~----------------------~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L-~~~g~~~~a~~ 247 (513)
T KOG0254|consen 191 ILLGYCINYGTSK----------------------VYAGWRIPLGLALIPAVILALGMLFLPESPRWL-IEKGRLEEAKR 247 (513)
T ss_pred HHHHHHHhhhhcc----------------------CCccHHHHHHHHHHHHHHHHHHHHhCCCChHHH-HHcCChHHHHH
Confidence 9999665555431 014699999999999988877788899999997 44566667777
Q ss_pred HHHHHHhhhcchhhhHhhhhh--------hccCC--cccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH
Q 010112 256 DMSKVLQVELEAEEDKVAKLS--------QRDSN--SFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA 325 (518)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (518)
.+.+..+.+..+...+.+..+ ..+.+ ..++++ +..++ +..+...+..+....++.....|.+.+++.
T Consensus 248 ~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~--~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~ 324 (513)
T KOG0254|consen 248 SLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFS-PKVRK--RLIIGLLLQLFQQLTGINYVFYYSTTIFKS 324 (513)
T ss_pred HHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcC-cchHH--HHHHHHHHHHHHHHhCCceEEeehHHHHHh
Confidence 777666622221111111110 01111 122332 22222 233444444555556666777888888888
Q ss_pred hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcccccc-----CC
Q 010112 326 IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWT-----LK 400 (518)
Q Consensus 326 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 400 (518)
.|..... ........+..+++..++.++.||+|||+.++.+...+.++.++++....... ..
T Consensus 325 ~g~~~~~-------------~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~ 391 (513)
T KOG0254|consen 325 AGLKSDT-------------FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSK 391 (513)
T ss_pred cCCCCch-------------HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 7776542 11445555566667777899999999999999999999999988876543221 11
Q ss_pred CchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcc
Q 010112 401 PNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGI 480 (518)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~ 480 (518)
...+..+...++....+..+..|+.|.+.+|.+|.+.|+.+.++....+++...+.......+.+ ..
T Consensus 392 ~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~-------------~~ 458 (513)
T KOG0254|consen 392 GAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITE-------------AL 458 (513)
T ss_pred chhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHH-------------hc
Confidence 22344455555666677788899999999999999999999999999999888888777766653 22
Q ss_pred cchhHHHHHHHHHHHHHH-HHh-hcccCCCCChhhhcc
Q 010112 481 GVKNSLIMLGVVNFVGMI-CTL-CVPESKGRSLEELSR 516 (518)
Q Consensus 481 g~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~ 516 (518)
+....|..++..+.+..+ ..+ ++||+|++++||+++
T Consensus 459 ~~~~~f~~f~~~~~~~~~~fv~~~~pETkg~sleei~~ 496 (513)
T KOG0254|consen 459 GIGGTFGYFGGICLLSLIIFVFFFVPETKGLTLEEINE 496 (513)
T ss_pred cccchHHHHHHHHHHHHHHHheEEcccCCCCcHHHHHH
Confidence 234556666666666665 444 899999999998764
No 21
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=100.00 E-value=2.2e-41 Score=336.11 Aligned_cols=434 Identities=27% Similarity=0.433 Sum_probs=307.8
Q ss_pred HHHHHhhhhhhhHHHHHHHhhhhhhhc-ccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHH
Q 010112 28 AGMGFFTDAYDLFCISLVTKLLGRIYY-HVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLI 106 (518)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~ 106 (518)
..++.+.+++|...++...+....... ..+..+.+.+.+..+.+++.+...+|..+|+++.|+++||+|||+.+.++.+
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~ 84 (451)
T PF00083_consen 5 ASLGGFLFGYDLGLIGSFASLLGFLQFFGWSSSESSCEKSSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISAL 84 (451)
T ss_pred eHHHHHHHHHHHHHHhhHHhhhhhhhccccccccccccchHHHHHHHHHHHHhhhccccccccccccccccccccccccc
Confidence 345568899999988888777663322 2222222222356688999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhcc---CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 010112 107 LMVISSIASGLSF---GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVA 183 (518)
Q Consensus 107 l~~i~~~~~~~~~---~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~ 183 (518)
+..+++++.++++ + ++.+.++|+++|++.|...+....++.|..|+++|++..++.+.+..+|..++..++
T Consensus 85 ~~~i~~~~~~~~~~~~~------~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~ 158 (451)
T PF00083_consen 85 LMIIGSILIAFAPSYNN------FWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIG 158 (451)
T ss_pred ccccccccccccccccc------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999999999999 7 799999999999999999999999999999999999999999999999988888777
Q ss_pred HHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhh
Q 010112 184 LIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQV 263 (518)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~ 263 (518)
..+.+.. ++++||..+++.++++++..+..+++||||+|+ ..+++.+|+++.+++..+.
T Consensus 159 ~~~~~~~--------------------~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL-~~~~~~~~A~~~l~~~~~~ 217 (451)
T PF00083_consen 159 YIVSYYS--------------------DNWGWRILLIFGAIPSLLVLLLRFFLPESPRWL-LSKGRDEEAEKVLRKLRGK 217 (451)
T ss_pred ccccccc--------------------cccccccccccccccccccccccccccccccee-ccccccccccccccccccc
Confidence 5553111 135699999999999888777778899999998 4445555676666664333
Q ss_pred hcchhh-hHhhh----hhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhh
Q 010112 264 ELEAEE-DKVAK----LSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAI 338 (518)
Q Consensus 264 ~~~~~~-~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 338 (518)
+..+++ ++..+ .++.+....+.++++..++. .........+.....++....+.+.++++.+.++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~l~~~~~~~g~~~~~~~~~~i~~~~~~~~~~------ 289 (451)
T PF00083_consen 218 EIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKR--LLIALLLQFFQQFSGINFIFYYSPSIFENAGISNSF------ 289 (451)
T ss_pred ccccccccccccccccccccceeeeecccccccccc--cccccccccccccccccccccccccccccccccccc------
Confidence 222111 11111 11111234455555442221 112122222222233344555667776666665551
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCC--chhHHHHHHHHHHHH
Q 010112 339 HEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKP--NRIGFVIMYSLTFFF 416 (518)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 416 (518)
.......+..+++.+++.++.||+|||+.++.+..+++++.+.+..........+ .....+....+....
T Consensus 290 --------~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~ 361 (451)
T PF00083_consen 290 --------LATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALFFAF 361 (451)
T ss_pred --------ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeecccc
Confidence 1334445666777778889999999999999998888877776651110111110 122233333334445
Q ss_pred HhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHH
Q 010112 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVG 496 (518)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 496 (518)
+..++.+..+.+..|.+|++.|+++.|+....++++++++|.+...+.+ ..+....+.+.+++++++
T Consensus 362 ~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~-------------~~~~~~~~~i~~~~~~i~ 428 (451)
T PF00083_consen 362 FSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFN-------------NLGGWGVFLIFAGVCLIA 428 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccc-------------cccccccchhhHHHHHHH
Confidence 5667788899999999999999999999999999999999999988873 334335567777777777
Q ss_pred HHHHh-hcccCCCCChhhhccC
Q 010112 497 MICTL-CVPESKGRSLEELSRN 517 (518)
Q Consensus 497 ~~~~~-~~~~~~~~~~~~~~~~ 517 (518)
.+..+ ++||||+|+++|++++
T Consensus 429 ~i~~~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 429 IIFVYFFLPETKGKTLEEIQEM 450 (451)
T ss_pred HhheeEEEeeCCCCCHHHHHhh
Confidence 66665 8999999999999864
No 22
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=2.8e-34 Score=279.25 Aligned_cols=373 Identities=11% Similarity=0.074 Sum_probs=263.3
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhH
Q 010112 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKV 100 (518)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~ 100 (518)
+|..++.+.++.+..........+.+|.+.+++ |.++.+.|++.+.+.+++.+++++.|+++||+|||++
T Consensus 7 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 76 (390)
T PRK03545 7 AWLRVVTLALAAFIFNTTEFVPVGLLSDIAQSF----------HMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKL 76 (390)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHcchHHHHhHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
Confidence 344444445544544444455666789999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 010112 101 YGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (518)
Q Consensus 101 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~ 180 (518)
+..+.++.++++++++++++ ++.++++|+++|++.+...+...+++.|++|+++|++++++...+.++|.+++|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~ 150 (390)
T PRK03545 77 LIGLFVLFIASHVLSALAWN------FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGL 150 (390)
T ss_pred HHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999 799999999999999988899999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHH
Q 010112 181 IVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSK 259 (518)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (518)
++++.+.+.. +||+.|++.++++++..+. ...+||.|+. + ++ + .+
T Consensus 151 ~l~~~l~~~~-----------------------gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~---~-~~--~-~~---- 196 (390)
T PRK03545 151 PLGRVIGQYL-----------------------GWRTTFLAIGGGALITLLLLIKLLPLLPSE---H-SG--S-LK---- 196 (390)
T ss_pred hHHHHHHHHh-----------------------cHHHHHHHHHHHHHHHHHHHHHhCCCCCCC---C-cc--h-HH----
Confidence 9999887544 4999999988877665444 3446665431 0 00 0 00
Q ss_pred HHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhh
Q 010112 260 VLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAI 338 (518)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 338 (518)
+.++.++++.. +......++.....+....+.+.++.+ .|+++...+
T Consensus 197 ---------------------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~---- 244 (390)
T PRK03545 197 ---------------------SLPLLFRRPAL-------VSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFAT---- 244 (390)
T ss_pred ---------------------HHHHHHhCcHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHH----
Confidence 00111122211 111122222223333334455555554 566655422
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHh
Q 010112 339 HEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFAN 418 (518)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (518)
.......++.+++.++.+++.||++||+.. .+..+...+...+.... ++.... ....+..+...
T Consensus 245 --------~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~------~~~~~~-~~~~~l~g~~~ 308 (390)
T PRK03545 245 --------LLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAA------NSEWHL-SVLSIFWGIAI 308 (390)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHh------chHHHH-HHHHHHHHHHH
Confidence 245556677888999999999999988654 34444334333322211 022222 22222223333
Q ss_pred cCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHH
Q 010112 419 FGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMI 498 (518)
Q Consensus 419 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (518)
....+.......|..| +.|++++|+.+...++|..+||.+.|.+. |..|++..|.+.+++.+++.+
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~-------------~~~g~~~~~~~~~~~~~~~~~ 374 (390)
T PRK03545 309 MCIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVS-------------LHLGLSSIGYVGAALALAALV 374 (390)
T ss_pred hcchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hccChhHHHHHHHHHHHHHHH
Confidence 3333444456667755 57899999999999999999999999998 567899999999999888888
Q ss_pred HHhhccc
Q 010112 499 CTLCVPE 505 (518)
Q Consensus 499 ~~~~~~~ 505 (518)
..+...+
T Consensus 375 ~~~~~~~ 381 (390)
T PRK03545 375 WSILIFR 381 (390)
T ss_pred HHHHHcc
Confidence 7774433
No 23
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.5e-34 Score=275.91 Aligned_cols=359 Identities=13% Similarity=0.056 Sum_probs=248.6
Q ss_pred hhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHH
Q 010112 35 DAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIA 114 (518)
Q Consensus 35 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~ 114 (518)
+......+++..|.+++|+ ++|+.+.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+.
T Consensus 3 ~~~~~~~~~~~lp~i~~~~----------~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~ 72 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAEDI----------DVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGR 72 (368)
T ss_pred hhHHHHHHHhhHHHHHHHh----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 4455677899999999999 999999999999999999999999999999999998876655555444332
Q ss_pred hhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCC
Q 010112 115 SGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHF 194 (518)
Q Consensus 115 ~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~ 194 (518)
....++ ++.++++|+++|++.+. .+.....++|++|+++|++++++.+.+..+|.+++++++.++.+.
T Consensus 73 ~~~~~~------~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~----- 140 (368)
T TIGR00903 73 LLDPFN------YEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTA----- 140 (368)
T ss_pred HHHhcc------HHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 333356 89999999999999986 566677779999999999999999999999999999999998743
Q ss_pred CCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHH-HHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhh
Q 010112 195 KAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTY-YWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVA 273 (518)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (518)
++||+.|++.++++++.. +..+++||+|++. .++. +. .+ ..
T Consensus 141 ------------------~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~--~~~~-~~-~~---------------~~- 182 (368)
T TIGR00903 141 ------------------GGLQLLIIPIAAVAAAGIILVLAALPALPFQA--AEGF-GF-KD---------------AV- 182 (368)
T ss_pred ------------------cchHHHHHHHHHHHHHHHHHHHHHcCCCCCCC--CCCc-ch-HH---------------HH-
Confidence 459999999777766654 4456789988752 1100 00 00 00
Q ss_pred hhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHH
Q 010112 274 KLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIAL 353 (518)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (518)
++.++.+++ +.++.....+++....+++...|.|.++++.|++.. .+. ......
T Consensus 183 ------~~~~~ll~~-------~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~~g~s~~------------~~~-~~~l~~ 236 (368)
T TIGR00903 183 ------KEFGALAGR-------KDLWIIGAILGFGVALFDNLAIWLEAALRPAGLEDI------------AGD-AVALAI 236 (368)
T ss_pred ------HHHHHHHcC-------hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCChH------------HHH-HHHHHH
Confidence 011122222 234556666777778888889999999987665432 111 222222
Q ss_pred hhcccchhhhhhhhhhccCh---hHHHH-HHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeecc
Q 010112 354 CSTVPGYWFTVAFIDYMGRF---AIQMM-GFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVP 429 (518)
Q Consensus 354 ~~~~~~~~~~g~l~dr~g~r---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (518)
+. +.+..+++.||..|| +.... ...+.++....+.... +....+....+.. +......+..+++.
T Consensus 237 ~~---g~~g~~~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~-------~~~~~~~~~~l~~-~~~~~~~~~~~~~~ 305 (368)
T TIGR00903 237 LA---GLIGVAVIPDRVARAGLRSIYIRAAALLIAAFFLALAFEL-------NRLALFAFIGIAG-LLMLPAYAIIMDWI 305 (368)
T ss_pred HH---HHHHHHHhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHcc-------ccHHHHHHHHHHH-HhhhhhHHHHHHHH
Confidence 22 223347788887653 33222 2333333333332221 1122222222222 22333345577889
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhccc
Q 010112 430 AEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPE 505 (518)
Q Consensus 430 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 505 (518)
+|.+|++.|+++.|+.+..+++++.++|.+.+.+.. +....|.++++..+++.+.....++
T Consensus 306 ~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~---------------~~~~~f~~~~~~~~i~~~~~~~~~~ 366 (368)
T TIGR00903 306 GKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS---------------SAEAYFTFLAILITIAFAIALLLPN 366 (368)
T ss_pred HHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc---------------CHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999998872 5667788888888888777654343
No 24
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=1.8e-34 Score=285.41 Aligned_cols=415 Identities=14% Similarity=0.098 Sum_probs=268.5
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 010112 17 TQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG 96 (518)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G 96 (518)
.++++|.++..+++.....+.++..++...|.+.+ . ++++.+.+++.+.+.+++.+++++.|+++||+|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-~----------g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g 91 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVE-Q----------GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSN 91 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-c----------CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccC
Confidence 34556666666667777777888778888887653 3 789999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHH
Q 010112 97 RKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (518)
Q Consensus 97 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~ 176 (518)
||+++..+.++.+++.+++++++.. .++++.+++.|++.|++.+...+.....+.|++|+++|++++++++.+.++|.
T Consensus 92 ~k~~l~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 169 (452)
T PRK11273 92 PRVFLPAGLILAAAVMLFMGFVPWA--TSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGG 169 (452)
T ss_pred CchhHHHHHHHHHHHHHHHHhhhcc--cccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999988876411 01167889999999999999888888899999999999999999999999887
Q ss_pred HH-HHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHH-HHHHhcCCCCcchhhhhhccHHHHH
Q 010112 177 LA-GGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALT-YYWRMRMPETARYTALVAKNAKQAA 254 (518)
Q Consensus 177 ~l-g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~ 254 (518)
.+ +++++..+.. ..+||+.|++.+++.++. ++..+++||+|+.... +++++.+
T Consensus 170 ~~~~~l~~~~~~~-----------------------~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~ 224 (452)
T PRK11273 170 GLPPLLFLLGMAW-----------------------FNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGL--PPIEEYK 224 (452)
T ss_pred hHHHHHHHHHHHH-----------------------hccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCC--CChhhhh
Confidence 44 5554433321 124999999987776664 4445667887754211 1111100
Q ss_pred HHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCc
Q 010112 255 ADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAA 333 (518)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 333 (518)
++ .+++. ++.++++.+..+.+.+...++ +.++...+..++.....++...+.|.++++ .|+++.+.
T Consensus 225 ~~--------~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~ 291 (452)
T PRK11273 225 ND--------YPDDY---NEKHEQELTAKQIFMQYVLPN--KLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKS 291 (452)
T ss_pred hc--------ccccc---ccccCCCccHHHHHHHHHHcC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 00 00000 000000111122222212211 234444445455555666777899999886 46654432
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhc--cChhHHH-HHHHHHHHHHHHHhhccccccCCCchhHHHHHH
Q 010112 334 TMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYM--GRFAIQM-MGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMY 410 (518)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (518)
........++.+++.+++|+++||+ +||+... ....+..++.+++.... ..+.....+..
T Consensus 292 ------------~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~ 354 (452)
T PRK11273 292 ------------SWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNP-----AGNPTVDMACM 354 (452)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhc-----ccChHHHHHHH
Confidence 2244556677778899999999999 4444322 22222222222222211 01111122212
Q ss_pred HHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHH-HHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHH
Q 010112 411 SLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIV-GAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIML 489 (518)
Q Consensus 411 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~-~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 489 (518)
...+ ....+.......+..|.+|++.||++.|+.+...++|+.+ +|.+.|.+. |..||+..|.++
T Consensus 355 ~~~g-~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~-------------~~~g~~~~f~~~ 420 (452)
T PRK11273 355 IVIG-FLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTV-------------DFFGWDGGFMVM 420 (452)
T ss_pred HHHH-HHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHH-------------HHhcchHHHHHH
Confidence 2222 2112222223345679999999999999999999988765 799999998 456788999999
Q ss_pred HHHHHHHHHHHhhcccCCCCChhh
Q 010112 490 GVVNFVGMICTLCVPESKGRSLEE 513 (518)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~ 513 (518)
+++++++.+........++|+.||
T Consensus 421 ~~~~~~~~~~~~~~~~~~~~~~~~ 444 (452)
T PRK11273 421 IGGSILAVILLIVVMIGEKRHHEE 444 (452)
T ss_pred HHHHHHHHHHHHHHhccccchHHH
Confidence 888888887777443333344343
No 25
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=6.3e-34 Score=276.18 Aligned_cols=379 Identities=12% Similarity=0.053 Sum_probs=273.0
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhH
Q 010112 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKV 100 (518)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~ 100 (518)
.|......+.+.+..... ...++..|.+++|+ ++|..+.+++.+.+.+++.+++++.|+++||+|||++
T Consensus 8 ~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~~~----------~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~ 76 (393)
T PRK09705 8 NFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQAS----------GMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRS 76 (393)
T ss_pred HHHHHHHHHHHHHcchhh-hccchhHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHH
Confidence 344444444444433322 67789999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 010112 101 YGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (518)
Q Consensus 101 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~ 180 (518)
+..+..+++++.++++++++ ++.++++|+++|++.+...+....++.|++| ++|+++++++..+..+|..+++
T Consensus 77 l~~~~~l~~~~~~~~~~a~~------~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~ 149 (393)
T PRK09705 77 VAISLLLIAVGALMRELYPQ------SALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGA 149 (393)
T ss_pred HHHHHHHHHHHHHHHHHCcc------hHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 7899999999999999999999999999997 8899999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcC-CCCcchhhhhhccHHHHHHHHHH
Q 010112 181 IVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRM-PETARYTALVAKNAKQAAADMSK 259 (518)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~esp~~~~~~~~~~~~~~~~~~~ 259 (518)
.+++++.+.. .+||..+.+.++..++..+..+.. ++.|+. ++
T Consensus 150 ~~~~~l~~~~----------------------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~---------- 192 (393)
T PRK09705 150 AITPWLVQHS----------------------ETWYQTLAWWALPAVVALFAWWWQSAREVAS-----SH---------- 192 (393)
T ss_pred HHHHHHHHhc----------------------CCHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-----cc----------
Confidence 9998887432 249998877655554443333222 221110 00
Q ss_pred HHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhH
Q 010112 260 VLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIH 339 (518)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (518)
+++.+..+.++++ ..+......++....++....+.|.++.+.|+++.+.+.
T Consensus 193 -----------------~~~~~~~~~l~~~-------~~~~l~~~~~~~~~~~~~~~~~lp~~l~~~g~s~~~ag~---- 244 (393)
T PRK09705 193 -----------------KTTTTPVRVVFTP-------RAWTLGVYFGLINGGYASLIAWLPAFYIEIGASAQYSGS---- 244 (393)
T ss_pred -----------------CCCcCCcccccCH-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhhhH----
Confidence 0000111111211 123333444445566777788889888887777665332
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhc
Q 010112 340 EVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANF 419 (518)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (518)
......++.++++++.+++.||++||+....+..+..++.+++..... +.. ... ..+. +....
T Consensus 245 --------~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~-~~~-~~l~-g~g~g 307 (393)
T PRK09705 245 --------LLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPL------QLP-VLW-AMVC-GLGLG 307 (393)
T ss_pred --------HHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccc------hHH-HHH-HHHH-HHhcc
Confidence 666777888899999999999999999988887776666655443221 111 111 1121 22222
Q ss_pred Cccceeeecccccc-chhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHH
Q 010112 420 GPNATTFVVPAEIF-PARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMI 498 (518)
Q Consensus 420 ~~~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (518)
...+.......+.. |++.+++..|+.+..++++..++|.+.|++.|..| +|...|.+.++++++..+
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g------------~~~~~~~~~~~~~~~~~~ 375 (393)
T PRK09705 308 GAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG------------NYLMDWAFHALCVVGLMI 375 (393)
T ss_pred chHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------CchHHHHHHHHHHHHHHH
Confidence 23344444445555 46789999999999999999999999999997554 577778887777777766
Q ss_pred HHh-hcccCCCCCh
Q 010112 499 CTL-CVPESKGRSL 511 (518)
Q Consensus 499 ~~~-~~~~~~~~~~ 511 (518)
... +.||+++|..
T Consensus 376 ~~~~~~~~~~~~~~ 389 (393)
T PRK09705 376 ITLRFAPARFPQLW 389 (393)
T ss_pred HHHHhccccccchh
Confidence 655 6777766643
No 26
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=4.4e-34 Score=279.58 Aligned_cols=390 Identities=20% Similarity=0.334 Sum_probs=270.6
Q ss_pred hhhcchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhh
Q 010112 13 DVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLG 92 (518)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~ 92 (518)
++.+.++++++.+..+.+..+..+++....++..|.+.+++ |.+..+.+++.+.+.++..+++++.|+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 76 (398)
T TIGR00895 7 RKQPLSRYQWRAIILSFLIMLMDGYDLAAMGFAAPAISAEW----------GLDPVQLGFLFSAGLIGMAFGALFFGPLA 76 (398)
T ss_pred hhCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhcc----------CCCHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 34445566677777777888888899999999999999999 99999999999999999999999999999
Q ss_pred hhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHH
Q 010112 93 DKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ 172 (518)
Q Consensus 93 dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~ 172 (518)
||+|||+++..+.++.+++.++..+.++ ++.+++.|++.|++.+...+...+++.|++|+++|++++++...+.
T Consensus 77 d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 150 (398)
T TIGR00895 77 DRIGRKRVLLWSILLFSVFTLLCALATN------VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGY 150 (398)
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHccc------hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHH
Confidence 9999999999999999999999999888 7899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHH-HHHHhcCCCCcchhhhhhccHH
Q 010112 173 GFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALT-YYWRMRMPETARYTALVAKNAK 251 (518)
Q Consensus 173 ~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~ 251 (518)
.+|..+++.+++.+.+ ..+||..|++.++..++. .+...++||++++.. +++++
T Consensus 151 ~~g~~~~~~~~~~l~~-----------------------~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 205 (398)
T TIGR00895 151 PIGAAVGGFLAGWLIP-----------------------VFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLV--SKRPE 205 (398)
T ss_pred HHHHHHHHHHHHHHhh-----------------------cccceeehhhhhhHHHHHHHHHHHhCCCCChHHH--hcCHH
Confidence 9999999999988864 345999999876555443 444566888876532 22222
Q ss_pred HHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCC
Q 010112 252 QAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPP 331 (518)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 331 (518)
+..+..++....+.+++.++.++.+++++..++..+....++..+..+......+.....++....+.|.+.++.++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 285 (398)
T TIGR00895 206 TVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLMVELGFSLS 285 (398)
T ss_pred HHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHH
Confidence 22222222111111110000000000000111111111111111222333333444445666667778877777777655
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHH
Q 010112 332 AATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYS 411 (518)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (518)
..+ .......++.+++.++.+++.||++||+.... ..+.++...++.... .+.........
T Consensus 286 ~~~------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~------~~~~~~~~~~~ 346 (398)
T TIGR00895 286 LAA------------TGGALFNFGGVIGSIIFGWLADRLGPRVTALL-LLLGAVFAVLVGSTL------FSPTLLLLLGA 346 (398)
T ss_pred HHH------------HHHHHHHHHHHHHHHHHHHHHhhcchHHHHHH-HHHHHHHHHHHHHHh------hCHHHHHHHHH
Confidence 422 25566667788899999999999999954443 333333333332211 02222222233
Q ss_pred HHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhh
Q 010112 412 LTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYA 463 (518)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 463 (518)
+.+.+ .....+..+++..|.+|++.|+++.|+.+....+|..++|.+.|++
T Consensus 347 ~~g~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 347 IAGFF-VNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 33322 2334566778899999999999999999999999999999999875
No 27
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=1.6e-33 Score=277.21 Aligned_cols=371 Identities=16% Similarity=0.194 Sum_probs=242.3
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHH-HHH-----HHHHHhhhhhhhhhhhhc
Q 010112 22 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVN-GVA-----LCGTLAGQLFFGWLGDKL 95 (518)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~-s~~-----~lg~~i~~~~~G~l~dr~ 95 (518)
++....++++.+++++|+..++++.|.+.+++ +.++.+.+.+. +.. .++..+++++.|+++||+
T Consensus 14 ~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~ 83 (434)
T PRK15075 14 ARAILRVTSGNFLEMFDFFLFGFYATAIAKTF----------FPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRV 83 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhh
Confidence 44677788899999999999999999999999 77777665433 322 233357899999999999
Q ss_pred chhhHHHHHHHHHHHHHHHhhhccCCchhh--HHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHH
Q 010112 96 GRKKVYGITLILMVISSIASGLSFGKSAKG--VIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (518)
Q Consensus 96 Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 173 (518)
|||++++.+.++++++++++++++++...+ ....++++|+++|++.+...+....+++|++|+++|++++++...+.+
T Consensus 84 Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~ 163 (434)
T PRK15075 84 GRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQ 163 (434)
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHH
Confidence 999999999999999999999999831000 001468999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHH
Q 010112 174 FGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQA 253 (518)
Q Consensus 174 lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 253 (518)
+|..+++.++..+.....+. ....++||++|++.++...+..+.....||++++. ++++
T Consensus 164 ~g~~~g~~~g~~l~~~~~~~---------------~~~~~gWr~~f~~~~~~~~~~~~~~~~~~e~~~~~--~~~~---- 222 (434)
T PRK15075 164 VAVVFAALLGYLLNQWLSPA---------------QMAEWGWRIPFLIGCLIVPFIFLIRRSLEETEEFL--ARKH---- 222 (434)
T ss_pred HHHHHHHHHHHHHHHhCCHH---------------HHhccchHHHHHHHHHHHHHHHHHHHhcCCCHHHH--Hhhh----
Confidence 99999998888875432210 01356799999986544322222222234432210 0000
Q ss_pred HHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCC
Q 010112 254 AADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPA 332 (518)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~ 332 (518)
+ .+..+.++.. +++++.........+.....++....+.|.++++ .|+++.+
T Consensus 223 ------------~-------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~ 275 (434)
T PRK15075 223 ------------R-------------PSMREIFRSL--AANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAAD 275 (434)
T ss_pred ------------c-------------cccccHHHHH--HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 0 0001111111 1111112222223333445566778889998876 5775543
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHH-HhhccccccCCCchhHHHHHHH
Q 010112 333 ATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFA-LAIPYHHWTLKPNRIGFVIMYS 411 (518)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 411 (518)
.........++.+++.+++|+++||+|||+.+..+..+..+.... +..... ............
T Consensus 276 ------------~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 339 (434)
T PRK15075 276 ------------SLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVA----APSFARMLAVEL 339 (434)
T ss_pred ------------HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc----CCchHHHHHHHH
Confidence 222555666777788899999999999999887765544322211 111110 111111111111
Q ss_pred HHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHH-HHHHHHHhhhHhhhhcC
Q 010112 412 LTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGK-AGAIVGAFGFLYAAQSK 467 (518)
Q Consensus 412 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~ 467 (518)
+...... ...+..+.+..|.+|++.|+++.|+.+..+. +++.++|.+.|.+.|..
T Consensus 340 ~~~~~~g-~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~ 395 (434)
T PRK15075 340 WLSFLYG-SYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVT 395 (434)
T ss_pred HHHHHHH-HHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhc
Confidence 1111221 2233445678899999999999999766665 45888999999998643
No 28
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=3.6e-33 Score=278.71 Aligned_cols=381 Identities=15% Similarity=0.091 Sum_probs=270.7
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhH
Q 010112 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKV 100 (518)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~ 100 (518)
+|.++..++++.++..+|...++..+|.+.+++ |.+.++.+|+.+.+.++..++++++|+++||+|||++
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l----------~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~ 73 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAAPTLSMTL----------GASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL 73 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 467788889999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhc-ccccchhHHHHHHHHHHHHHHHH
Q 010112 101 YGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILAG 179 (518)
Q Consensus 101 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~rg~~~~~~~~~~~lG~~lg 179 (518)
++.+.++.++++++++++++ ++.++++|+++|++.+...+.....+.+++ |+++|+++++++.....+|..+|
T Consensus 74 l~~~~~~~~~~~~~~~~a~~------~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~g 147 (495)
T PRK14995 74 LMLGGTLFGLASLAAAFSPT------ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFG 147 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999 899999999999999998888888887776 67899999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHH-
Q 010112 180 GIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADM- 257 (518)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~- 257 (518)
|.+++++.+. .+||+.|++...++++.+++ .+++||+|+.. .++.+........
T Consensus 148 p~lgg~l~~~-----------------------~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~-~~~~d~~g~~~~~~ 203 (495)
T PRK14995 148 PLVGGILLEH-----------------------FYWGSVFLINVPIVLVVMGLTARYVPRQAGRR-DQPLNLGHALMLIV 203 (495)
T ss_pred HHHHHHhhcc-----------------------CChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCCChHhHHHHHH
Confidence 9999999754 34999999987766665443 45677765421 1111111110000
Q ss_pred ---HHHHhhh---cch-hh-----------------hHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 010112 258 ---SKVLQVE---LEA-EE-----------------DKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFY 313 (518)
Q Consensus 258 ---~~~~~~~---~~~-~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (518)
......+ ... .. ...+...+++.-..+.++++ .+.......+.....++
T Consensus 204 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~-------~~~~~~~~~~~~~~~~~ 276 (495)
T PRK14995 204 AILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHR-------IILSGVVMAMTAMITLV 276 (495)
T ss_pred HHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCc-------ccHHHHHHHHHHHHHHH
Confidence 0000000 000 00 00000001111112222222 22223333334444556
Q ss_pred hHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhh
Q 010112 314 SQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAI 392 (518)
Q Consensus 314 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 392 (518)
+...+.|.+++. .|+++.+. .....+..++..++.++.|++.||+|+|+.+..+..+.+++.+++..
T Consensus 277 ~~~~~~~~~lq~v~g~s~~~a------------g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~ 344 (495)
T PRK14995 277 GFELLMAQELQFVHGLSPLEA------------GMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAM 344 (495)
T ss_pred HHHHHHHHHHHHHcCCCHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHH
Confidence 666777888776 57766543 33667777788889999999999999999988888777766655543
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 393 PYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
... ..+.+.......+.+...+. ..+.......+..|++.++.+.++.++..++|+.+|+.+.|.+.+
T Consensus 345 ~~~----~~~~~~~~~~~~l~G~g~g~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 345 TDF----STQQWQAWGLMALLGFSAAS-ALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred hcC----CCchHHHHHHHHHHHHhHHH-HHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 221 11222222222232322222 334445566778899999999999999999999999999999875
No 29
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=1.1e-33 Score=281.65 Aligned_cols=422 Identities=13% Similarity=0.092 Sum_probs=283.3
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhccc------------CCCCCCCCCCchhhHHHHHHHHHHHHhh
Q 010112 17 TQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHV------------DGAKKPGTLPPNVSAAVNGVALCGTLAG 84 (518)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~------------~~~~~~~~~s~~~~g~~~s~~~lg~~i~ 84 (518)
..+.|+.+..+++++..+.+.|+...+...+.+.++-... +..+.|.+++..+.|++.+.+.+++.++
T Consensus 13 ~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~ 92 (465)
T TIGR00894 13 FCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTDLACLSAENELDNIKNPNFKWSGALQGLILSSHFYGQIII 92 (465)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCCccccccccccccccCCCCCCCHHHhhHHHHHHHHHHHHH
Confidence 4566788888888889999999999999988876521000 0112256899999999999999999999
Q ss_pred hhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhc--cCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccch
Q 010112 85 QLFFGWLGDKLGRKKVYGITLILMVISSIASGLS--FGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRG 162 (518)
Q Consensus 85 ~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg 162 (518)
+++.|+++||+|||+++..+.++++++++++.++ .+ ++.+++.|+++|++.+...+....++.|++|+++|+
T Consensus 93 ~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~ 166 (465)
T TIGR00894 93 QIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGG------IALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERS 166 (465)
T ss_pred HcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcC------chHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHH
Confidence 9999999999999999999999999999887554 44 678999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH-hcCCCCcc
Q 010112 163 AFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR-MRMPETAR 241 (518)
Q Consensus 163 ~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~esp~ 241 (518)
+++++...+..+|.++++++++.+.+.. .+||+.|++.++++++..+.+ .+.+|+|+
T Consensus 167 ~~~~~~~~~~~~g~~i~~~l~~~l~~~~----------------------~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~ 224 (465)
T TIGR00894 167 RLLGMSTSGFQLGTFIFLPISGWLCESW----------------------GGWPMIFYVFGIVGCAWSLLWFVFPADDPS 224 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc----------------------CCCCeehhhhhHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999886431 259999999888877665543 44667775
Q ss_pred hhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHH
Q 010112 242 YTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKD 321 (518)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (518)
.. ++.+++| ++...+. .+++ +++.+....+++...+ +.++......++....++....|.|.
T Consensus 225 ~~--~~~~~~~-~~~i~~~----~~~~--------~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~lp~ 286 (465)
T TIGR00894 225 IH--PCISKFE-KKYINSS----LQGQ--------KGSTRQSLPIKAIPKS---LPVWAIWFAIFGHFWLYTILPTYLPT 286 (465)
T ss_pred cC--CCCCHHH-HHHHHhh----cccc--------cCCCCCCCCHHHHhcC---HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 41 1111111 1111110 0000 0000001112221111 23455666666777777788889998
Q ss_pred HHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH--------HHHHHHHHHHHHHHhh
Q 010112 322 IFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ--------MMGFFFMTVFMFALAI 392 (518)
Q Consensus 322 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~--------~~~~~~~~~~~~~~~~ 392 (518)
++++ .|++..+.+ .......++.+++.+++|+++||+++|+.. ..+......+..++..
T Consensus 287 ~l~~~~g~s~~~~g------------~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (465)
T TIGR00894 287 FISWVLRVSGKENG------------LLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYAL 354 (465)
T ss_pred HHHHHhCcChHHhH------------HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8875 566554422 255556677788889999999997654221 1111111111111111
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcC
Q 010112 393 PYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKR 472 (518)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 472 (518)
.. . .......+....+.+++. ....+..+....|..|. .+|.+.|+.+..+.++++++|.+.|.+.+..+
T Consensus 355 ~~--~--~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~---- 424 (465)
T TIGR00894 355 PY--L--SAAFYLTIIILTLANAVS-SGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDS---- 424 (465)
T ss_pred HH--c--CCchHHHHHHHHHHHHHh-hhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC----
Confidence 11 0 011222222222222222 22233344455666654 89999999999999999999999999875221
Q ss_pred CCCCCCcccchhHHHHHHHHHHHHHHHHhhcccCCCCChh
Q 010112 473 DAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPESKGRSLE 512 (518)
Q Consensus 473 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (518)
..+|...|.+.+++.+++.++..+.++.++++.+
T Consensus 425 ------~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~ 458 (465)
T TIGR00894 425 ------KNVWLIVFLIMAFVNILCVIFYLIFGSAERQDWA 458 (465)
T ss_pred ------chHHHHHHHHHHHHHHHHHHHeeeeecceecCCC
Confidence 1358889999998888888776655544444433
No 30
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.7e-33 Score=283.07 Aligned_cols=407 Identities=16% Similarity=0.210 Sum_probs=272.5
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 010112 17 TQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG 96 (518)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G 96 (518)
.++.+|+.+..++++.+.+.++....++..|.+.+++ |++..+.+++.+.+.+++.+++++.|+++||+|
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 83 (496)
T PRK03893 14 LNRAQWKAFSAAWLGYLLDGFDFVLITLVLTEVQGEF----------GLTTVQAASLISAAFISRWFGGLLLGAMGDRYG 83 (496)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3456777888888999999999999999999999999 999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHH
Q 010112 97 RKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI 176 (518)
Q Consensus 97 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~ 176 (518)
||+++..+.++.+++.++++++++ ++.+++.|++.|++.+...+....++.|++|+++|+++.++...+..+|.
T Consensus 84 ~r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~ 157 (496)
T PRK03893 84 RRLAMVISIVLFSVGTLACGFAPG------YWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGA 157 (496)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999888 79999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHH
Q 010112 177 LAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAAD 256 (518)
Q Consensus 177 ~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~ 256 (518)
.+++.+++.+.+ .++||+.|++.++..++.++....+||++++...++++ ++. +.
T Consensus 158 ~~~~~~~~~l~~-----------------------~~~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~-~~ 212 (496)
T PRK03893 158 VVAAQVYSLVVP-----------------------VWGWRALFFIGILPIIFALWLRKNLPEAEDWKEKHAGK-APV-RT 212 (496)
T ss_pred HHHHHHHHHHhc-----------------------cCCHHHHHHHHHHHHHHHHHHHHhCCCchhhhhhcccc-ccc-hh
Confidence 999999998863 34599999886555554444455577766542111110 000 00
Q ss_pred HHHHHhhhcchhhhHhh----------hhhhccCCcccc-------------hhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q 010112 257 MSKVLQVELEAEEDKVA----------KLSQRDSNSFGL-------------FSREFLKRHGLHLFGTTSTWFLLDIAFY 313 (518)
Q Consensus 257 ~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (518)
..+....+......... .........+.. +......+............+......+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (496)
T PRK03893 213 MVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFLYSW 292 (496)
T ss_pred HHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHhccc
Confidence 00000000000000000 000000000000 0000000000011111111111111112
Q ss_pred hHHhhHHHHHH-HhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhh
Q 010112 314 SQNLFQKDIFS-AIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAI 392 (518)
Q Consensus 314 ~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 392 (518)
....+.|.+++ +.|+++.+. ........++.+++.++++++.||++||+.+..+..+..+..+++..
T Consensus 293 ~~~~~lp~~l~~~~g~~~~~~------------g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~ 360 (496)
T PRK03893 293 PIQALLPTYLKTDLGYDPHTV------------ANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFA 360 (496)
T ss_pred hHHHHHHHHHHhhcCCCHHHH------------HHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhh
Confidence 34567788875 566655432 22556667778889999999999999999988776665554443332
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcC
Q 010112 393 PYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKR 472 (518)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 472 (518)
... ..................+..+....+..|.+|++.|++++|+.+....+|..++|.+.|.+.
T Consensus 361 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~-------- 426 (496)
T PRK03893 361 IGG------ANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIA-------- 426 (496)
T ss_pred ccc------cHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHh--------
Confidence 221 111222222222222223334556677889999999999999999999999999999999998
Q ss_pred CCCCCCcccchhHHHHHHHHHHH
Q 010112 473 DAGYPAGIGVKNSLIMLGVVNFV 495 (518)
Q Consensus 473 ~~~~~~~~g~~~~~~~~~~~~~~ 495 (518)
+..|+...+...++++.+
T Consensus 427 -----~~~g~~~~~~~~~~~~~~ 444 (496)
T PRK03893 427 -----QRLDLGTALASLSFSLTF 444 (496)
T ss_pred -----ccCChHHHHHHHHHHHHH
Confidence 456777766555544333
No 31
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=4.4e-33 Score=272.07 Aligned_cols=379 Identities=15% Similarity=0.012 Sum_probs=263.6
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhh-hhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHH
Q 010112 25 IVIAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGI 103 (518)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~ 103 (518)
+....+..++..++.....+.+|. +.+++ +.|+.+.|++.+++.+++.+++++.|+++||+|||+++..
T Consensus 17 ~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~----------g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~ 86 (399)
T PRK05122 17 IVSIVMFTFISYLTIGLPLAVLPGYVHDQL----------GFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVF 86 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHH
Confidence 344556677777777888888886 67788 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCc--hhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 010112 104 TLILMVISSIASGLSFGKS--AKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (518)
Q Consensus 104 ~~~l~~i~~~~~~~~~~~~--~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~ 181 (518)
+.++.+++.+.+.++...+ ....++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++|+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~ 166 (399)
T PRK05122 87 GLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAP 166 (399)
T ss_pred HHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHH
Confidence 9999888877665542100 00126789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHH
Q 010112 182 VALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVL 261 (518)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~ 261 (518)
+++.+.+.. +||..+++.++..++..+.....|++++. +++++
T Consensus 167 l~~~l~~~~-----------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~---------- 209 (399)
T PRK05122 167 LGVLLYHWG-----------------------GLAGLGLLIMLLALLGLLLARPRPAVPPV----KGERL---------- 209 (399)
T ss_pred HHHHHHHcc-----------------------cHHHHHHHHHHHHHHHHHHHhcCCCCCCC----Cccch----------
Confidence 999987543 49999887666555444333323332211 00000
Q ss_pred hhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHH
Q 010112 262 QVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEV 341 (518)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 341 (518)
+.++.+++. +. ...........+.....+.+.++.+.+++..
T Consensus 210 -------------------~~~~~~~~~--~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 251 (399)
T PRK05122 210 -------------------PFRRVLGRV--WP-------YGMGLALASIGFGTIATFITLYYAARGWDGA---------- 251 (399)
T ss_pred -------------------hHHHHHHHH--HH-------HHHHHHHHHHHHHHHHHHHHHHHHHcccccc----------
Confidence 000000100 00 0111112223334444566666665444211
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCc
Q 010112 342 YKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGP 421 (518)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (518)
........++.+++.++.+++.||+++|+.+..+..+.+++.+++.... +.........+.+.+.. ..
T Consensus 252 ----~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~G~~~~-~~ 319 (399)
T PRK05122 252 ----ALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAP-------SPWMALIGAALTGFGFS-LV 319 (399)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc-------cHHHHHHHHHHHHHhHH-HH
Confidence 1133445556677888999999999999998888777777766655433 22222222222222222 23
Q ss_pred cceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 422 NATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
.+.......|..|++.|+++.|+.+...++|..++|.+.|.+. +..||+..+.+.+++.+++.+..+
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~-------------~~~g~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 320 FPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVA-------------SWFGYPSIFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHcCHHHHHHHHHHHHHHHHHHHH
Confidence 3444455678889999999999999999999999999999998 456888999999888888887777
Q ss_pred hcccCCCCChhh
Q 010112 502 CVPESKGRSLEE 513 (518)
Q Consensus 502 ~~~~~~~~~~~~ 513 (518)
+++++++|+.+|
T Consensus 387 ~~~~~~~~~~~~ 398 (399)
T PRK05122 387 LLYRRAPRAVPE 398 (399)
T ss_pred HhcccccccCCC
Confidence 666655554443
No 32
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=2e-33 Score=274.82 Aligned_cols=387 Identities=15% Similarity=0.164 Sum_probs=268.7
Q ss_pred HhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVIS 111 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~ 111 (518)
++...+++..++...|.+.+++ +.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 72 (399)
T TIGR00893 3 TVINYLDRANLSFAAPMLQEDL----------GLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVF 72 (399)
T ss_pred ehHHHHHHHhhhHhHHHHHHhh----------CCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHH
Confidence 4567788889999999999999 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 112 SIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
.++++++++ ++.++++|++.|++.+...+....++.|++|+++|++++++.+....+|.++++.+++.+.+.
T Consensus 73 ~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~-- 144 (399)
T TIGR00893 73 TGLQAFAGA------YVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIH-- 144 (399)
T ss_pred HHHHHHHcC------HHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHh--
Confidence 999999998 799999999999999999999999999999999999999999999999999999999988643
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhh
Q 010112 192 HHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEED 270 (518)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (518)
.+||+.|++.+++.++..+. .++.||+|+. .+..++++......+ ...+. +
T Consensus 145 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~----~ 196 (399)
T TIGR00893 145 ---------------------FSWQWAFIIEGVLGIIWGVLWLKFIPDPPQK--AKWLTEEEKYIVVGG-LLAEQ----Q 196 (399)
T ss_pred ---------------------CCchHHHHHHHHHHHHHHHHhhheecCCCCc--cccCCHHHHhhcchh-hcccc----c
Confidence 34999999988777665444 4456666543 111111111110000 00000 0
Q ss_pred HhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHH
Q 010112 271 KVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQT 349 (518)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~ 349 (518)
+.++.+......++.+++ +.++......+...........+.|.++.+ .+.++.+. ....
T Consensus 197 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 257 (399)
T TIGR00893 197 GKGPSTPKKYQIKELLKD-------RRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILEA------------GFMA 257 (399)
T ss_pred cccccCCCccchHHHhcC-------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHHh------------hHHH
Confidence 000000011111122222 123334444555555666666777877764 45544332 2255
Q ss_pred HHHHhhcccchhhhhhhhhhccChhHHHH-HHHHHHHH---HHHHhhccccccCCCchhHHHHHHHHHHHHHhcCcccee
Q 010112 350 LIALCSTVPGYWFTVAFIDYMGRFAIQMM-GFFFMTVF---MFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATT 425 (518)
Q Consensus 350 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (518)
....++.+++.++.+++.||++||+.... ......++ ..+...... .. ............. ....+..+..
T Consensus 258 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~-~~~~~~~~~~ 332 (399)
T TIGR00893 258 SLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATN---YV-NIPYAALALVALG-FFGLGAGAIG 332 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhc---cc-hhHHHHHHHHHHH-HhchhhhhHH
Confidence 56667778899999999999999862111 11111111 111111110 00 1111222222222 2223356788
Q ss_pred eeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCccc-chhHHHHHHHHHHHHHHHHh
Q 010112 426 FVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIG-VKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~ 501 (518)
+++..|.+|++.|+++.|+.+...++|..++|.+.|.+.+ ..| |+..+.+.+++.+++.+..+
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~-------------~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 333 WALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAA-------------TTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred HHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhcc-------------CCCchhHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999984 445 88888888888877766654
No 33
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=5.4e-33 Score=270.29 Aligned_cols=376 Identities=12% Similarity=0.084 Sum_probs=273.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhh
Q 010112 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKK 99 (518)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~ 99 (518)
+|++....+.++.+..+.+....++..|.+.+++ ++|.++.+++.+.+.+++.+++++.|++.||+|||+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~~----------~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~ 73 (394)
T PRK03699 4 NRIKLTWISFLSYALTGALVIVTGMVMGPIAEYF----------NLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKR 73 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 3456667777888899999999999999999999 999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHH
Q 010112 100 VYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (518)
Q Consensus 100 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg 179 (518)
++..+.++.+++.++++++++ ++.++++|+++|++.+...+....++.|++|+++|+++++..+....+|..++
T Consensus 74 ~~~~~~~~~~i~~~l~~~~~~------~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~ 147 (394)
T PRK03699 74 QLIFGFALMILAVAGLMFSHS------LALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIF 147 (394)
T ss_pred HHHHHHHHHHHHHHHHHHcch------HHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988 78999999999999999899999999999999999999999988899999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHH
Q 010112 180 GIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSK 259 (518)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (518)
|.+.+.+.. ...+||+.|.+.+++.++..++.++ .+.|+. .++++ +
T Consensus 148 ~~~~~~l~~----------------------~~~gw~~~f~~~~~~~~~~~~~~~~-~~~p~~--~~~~~-~-------- 193 (394)
T PRK03699 148 PIIAAYLLA----------------------RSIEWYWVYACIGLVYVAIFILTLF-SEFPAL--GKHAP-K-------- 193 (394)
T ss_pred HHHHHHHHh----------------------ccccHHHHHHHHHHHHHHHHHHHHh-cCCccc--cccCc-c--------
Confidence 988877752 2345999999877776655444332 222221 00000 0
Q ss_pred HHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhh
Q 010112 260 VLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAI 338 (518)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~ 338 (518)
++ ++.. +.. .+ +.++......++....++....|.|.++++ .|+++.+.+.
T Consensus 194 -------~~-------~~~~-------~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~--- 245 (394)
T PRK03699 194 -------AD-------KPVA-------KEK-WG---IGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGN--- 245 (394)
T ss_pred -------cc-------Cccc-------ccc-CC---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhH---
Confidence 00 0000 000 01 122334444445455666777889999865 5776654332
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHh
Q 010112 339 HEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFAN 418 (518)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (518)
......++..+++++.+++.||+++|+.+.....+..+...++.... +.......... .++..
T Consensus 246 ---------~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-~G~~~ 308 (394)
T PRK03699 246 ---------LVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD-------DPSHLLYAILG-LGFFS 308 (394)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC-------CchHHHHHHHH-HHHHH
Confidence 45555667788999999999999999988877666655554443322 12222222222 22222
Q ss_pred cCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHH
Q 010112 419 FGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMI 498 (518)
Q Consensus 419 ~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (518)
.+..+...+...|..| +.++...|......++|..++|.+.|++.+ ..|++..+++.+++++++.+
T Consensus 309 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~-------------~~g~~~~~~~~~~~~~~~~~ 374 (394)
T PRK03699 309 SAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVA-------------HFGLQAALLTANGLYAVVFV 374 (394)
T ss_pred HHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHH-------------HhCchhhhhhhHHHHHHHHH
Confidence 2234445555666655 346778888889999999999999999984 45778888888888777766
Q ss_pred HHhhcc
Q 010112 499 CTLCVP 504 (518)
Q Consensus 499 ~~~~~~ 504 (518)
.....+
T Consensus 375 ~~~~~~ 380 (394)
T PRK03699 375 MCILLG 380 (394)
T ss_pred HHHHHH
Confidence 555443
No 34
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.1e-33 Score=274.69 Aligned_cols=358 Identities=17% Similarity=0.118 Sum_probs=254.3
Q ss_pred hhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhh
Q 010112 38 DLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGL 117 (518)
Q Consensus 38 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~ 117 (518)
.+..+++..|.+.+++ +++..+.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++
T Consensus 18 ~~~~~~~~~~~~~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~ 87 (377)
T TIGR00890 18 YVYTWTLLAPPLGRYF----------GVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAI 87 (377)
T ss_pred HHhhhhhHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHH
Confidence 3667889999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 010112 118 SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAP 197 (518)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~ 197 (518)
+++ ++.++++|++.|++.+...+.....+.|++| ++|+++.++...+.++|..+++++...+.+
T Consensus 88 ~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------- 151 (377)
T TIGR00890 88 ADS------LAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN--------- 151 (377)
T ss_pred HHH------HHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh---------
Confidence 998 7999999999999999888888889999997 679999999999999998877666666542
Q ss_pred CCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhh
Q 010112 198 PYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLS 276 (518)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (518)
..+||+.|++.+++.++..+. .++++|+|+.. ++++.+. + +
T Consensus 152 --------------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---------------~-~------ 193 (377)
T TIGR00890 152 --------------LEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL--IKTNIEV---------------S-V------ 193 (377)
T ss_pred --------------cccHHHHHHHHHHHHHHHHHHHHHheecCchhc--cccCccc---------------c-h------
Confidence 345999999988877765544 34455443210 0000000 0 0
Q ss_pred hccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhc
Q 010112 277 QRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCST 356 (518)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (518)
++.+.++.++++. .+......+...........+.+.+.++.++++.. .........++.
T Consensus 194 -~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 253 (377)
T TIGR00890 194 -KDYTVWEMLRTPQ-------FWVLYLSFFLNAVSGLLLIGLYKPYGQSLGLSDGF------------LVLAVSISSIFN 253 (377)
T ss_pred -hhhhHHHHHcCcc-------HHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCHHH------------HHHHHHHHHHHH
Confidence 0001111112211 11222222222223333333445555555544322 222555666778
Q ss_pred ccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh
Q 010112 357 VPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR 436 (518)
Q Consensus 357 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 436 (518)
+++.++.+++.||++||+.+..+..+.+++.+++..... ...........+.+ .......+....+..|.+|++
T Consensus 254 ~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g-~~~g~~~~~~~~~~~~~~~~~ 327 (377)
T TIGR00890 254 GGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPM-----LNDVLFLATVALVF-FTWGGTISLFPSLVSDIFGPA 327 (377)
T ss_pred HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHccc-----chhHHHHHHHHHHH-HHhccchhccHHHHHHHhhhh
Confidence 889999999999999999988888877777766554331 01111112222222 222223345556788999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHH
Q 010112 437 LRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMI 498 (518)
Q Consensus 437 ~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (518)
+|+++.|+.+...++|..++|.+.|.+. +..||+..|.+.+++.+++.+
T Consensus 328 ~~~~~~g~~~~~~~~g~~~~~~~~g~l~-------------~~~g~~~~f~~~~~~~~~~~~ 376 (377)
T TIGR00890 328 NSAANYGFLYTAKAVAGIFGGLIASHAL-------------TEIGFEYTFIVTGAFALTSLA 376 (377)
T ss_pred hhhhHhHHHHHHHHHHHHHHHHHHHHHH-------------hhhchhhHHHHHHHHHHHhcc
Confidence 9999999999999999999999999998 456888888888887777643
No 35
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=3e-32 Score=270.25 Aligned_cols=398 Identities=14% Similarity=0.099 Sum_probs=258.0
Q ss_pred hhhcchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhh
Q 010112 13 DVAKTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLG 92 (518)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~ 92 (518)
+..+..+.+++.+...+...+...++...+++..|.+.+++ +++..+.+++.+.+.+++.+++++.|+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~----------gls~~~~g~~~~~~~~~~~~~~~~~G~l~ 95 (476)
T PLN00028 26 RLFSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPIIRDNL----------NLTKSDIGNAGIASVSGSIFSRLAMGPVC 95 (476)
T ss_pred cccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445566666777777778888888899999999999 99999999999999999999999999999
Q ss_pred hhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHH
Q 010112 93 DKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQ 172 (518)
Q Consensus 93 dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~ 172 (518)
||+|||+++..+.++++++.++++++++ ++.++++|+++|++.+.. .....+++|++|+++|++++++.....
T Consensus 96 dr~G~r~~~~~~~~~~~~~~~~~~~~~s------~~~l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~ 168 (476)
T PLN00028 96 DLYGPRYGSAFLLMLTAPAVFCMSLVSS------ATGFIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWG 168 (476)
T ss_pred HHhCChHHHHHHHHHHHHHHHHHHHhcC------HHHHHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHH
Confidence 9999999999999999999999999988 788999999999988764 445678999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCC-CCcchhhhhhccHH
Q 010112 173 GFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMP-ETARYTALVAKNAK 251 (518)
Q Consensus 173 ~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~-esp~~~~~~~~~~~ 251 (518)
++|..+++.+...+........ ..+..+||+.|++.++++++..+..++++ +.|+. +.+
T Consensus 169 ~~g~~~~~~~~~~i~~~~~~~~--------------~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~------~~~ 228 (476)
T PLN00028 169 NLGGGVTQLLMPLVFPLIKDAG--------------APSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDG------NYR 228 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--------------CcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCC------chh
Confidence 8888888777765543221000 01124799999998888776655544444 44431 000
Q ss_pred HHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCC
Q 010112 252 QAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIP 330 (518)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~ 330 (518)
+..+. .+ .++.+..+.++.. .+. +..+...+.++......+....+.|.++.+ .|+++
T Consensus 229 ~~~~~--------~~----------~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 287 (476)
T PLN00028 229 ELKKS--------GT----------MPKDSFSKVLRYG-VTN--YRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSL 287 (476)
T ss_pred hHHhc--------Cc----------cccccHHHHHHHH-HcC--chhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCH
Confidence 00000 00 0000001111111 111 122333333343334444555667777654 46654
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChh-------HHHHHHHHHHHHHHHHhhccccccCCCch
Q 010112 331 PAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFA-------IQMMGFFFMTVFMFALAIPYHHWTLKPNR 403 (518)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (518)
.. +........++.+++++++|+++||++||+ .......+.+++.+++.... +.
T Consensus 288 ~~------------a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~-------~~ 348 (476)
T PLN00028 288 ET------------AGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRAN-------SL 348 (476)
T ss_pred HH------------HHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccc-------hH
Confidence 43 223566667778889999999999998652 22222222222222222111 11
Q ss_pred hHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccch
Q 010112 404 IGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVK 483 (518)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~ 483 (518)
...+....+...+... ..+..+.+..+. +++.+|++.|+.+..+++|++++|.+.+ .+ +..+|+
T Consensus 349 ~~~~~~~~l~~~~~~~-~~~~~~~~~~~~-~~~~~g~~~g~~~~~g~lg~~i~~~l~~--~~------------~~~~y~ 412 (476)
T PLN00028 349 GAAIVVMILFSIFVQA-ACGATFGIVPFV-SRRSLGVISGLTGAGGNVGAVLTQLLFF--TG------------SSYSTE 412 (476)
T ss_pred HHHHHHHHHHHHHHHH-hhhhhcccCccc-ChhhchhhhhhhhccccHHHHHHHHHHH--hc------------CCccHh
Confidence 1122222222222211 233455666776 4578999999998877788877777654 11 234788
Q ss_pred hHHHHHHHHHHHHHHHHhhc
Q 010112 484 NSLIMLGVVNFVGMICTLCV 503 (518)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~ 503 (518)
..|.+.+++.+++.++.++.
T Consensus 413 ~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 413 TGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred hHHHHHHHHHHHHHHHHHhe
Confidence 89999998888888777754
No 36
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.9e-32 Score=267.49 Aligned_cols=381 Identities=10% Similarity=-0.019 Sum_probs=267.6
Q ss_pred HhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVIS 111 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~ 111 (518)
.++..+......+..|.+.+++ +.+..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~ 95 (417)
T PRK10489 26 RFISIFGLGLLGVAVPVQIQMM----------TGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLG 95 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----------HCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHH
Confidence 4445555566778888888888 889999999999999999999999999999999999999888888777
Q ss_pred HHHhhh-----ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 112 SIASGL-----SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 112 ~~~~~~-----~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
.+..+. .++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+|+.+++.+
T Consensus 96 ~~~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l 169 (417)
T PRK10489 96 FIGLALNAFLPEPS------LLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLL 169 (417)
T ss_pred HHHHHHHHHcCCCc------HHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHH
Confidence 665442 344 788899999999998888888999999999999999999999999999999999999998
Q ss_pred HhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcc
Q 010112 187 SSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELE 266 (518)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (518)
.+..+ ||+.|++.++..++..+..+.+||+++.. ++++ +..+...+
T Consensus 170 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~--~~~~~~~~------- 215 (417)
T PRK10489 170 IAAGG-----------------------VAWNYGLAAAGTFITLLPLLRLPALPPPP--QPRE--HPLRSLLA------- 215 (417)
T ss_pred HHHHh-----------------------hHHHHHHHHHHHHHHHHHHHhCCCCCCCC--cccc--cchHHHHH-------
Confidence 75444 99999887777666666666677765421 0000 00000000
Q ss_pred hhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHH
Q 010112 267 AEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIA 345 (518)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~ 345 (518)
..+..++++.. +...... ++. ........+.|.+.++ .|.++...+
T Consensus 216 --------------~~~~~~~~~~~----~~~~~~~---~~~-~~~~~~~~~~p~~~~~~~g~~~~~~g----------- 262 (417)
T PRK10489 216 --------------GFRFLLASPVV----GGIALLG---GLL-TMASAVRVLYPALADEVWQMGAAQIG----------- 262 (417)
T ss_pred --------------HHHHHHcChHH----HHHHHHH---HHH-HHHHhHHHhhHHHHHhccCCChhHhH-----------
Confidence 00011111111 1111111 111 1123445567878776 666654422
Q ss_pred HHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCcccee
Q 010112 346 RAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATT 425 (518)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (518)
.......++.+++.++.+++.||.++++.+..+..+.+++.+++.... +.....+...+. +.......+..
T Consensus 263 -~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-g~~~~~~~~~~ 333 (417)
T PRK10489 263 -LLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMP-------MWILAVLCLALF-GYLSAISSLLQ 333 (417)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccc-------hHHHHHHHHHHH-HHHHHHHHHHH
Confidence 255556677888889999999998777777777777766665554332 222222222222 22222233455
Q ss_pred eeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHH-HHHhhcc
Q 010112 426 FVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGM-ICTLCVP 504 (518)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~ 504 (518)
.++..|..|++.||+++|+.+...++|..++|.+.|.+.+ ..|+...+...+++.++.. +....++
T Consensus 334 ~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 400 (417)
T PRK10489 334 YTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGA-------------MMTPVASASASGFGLLIIGVLLLLVLG 400 (417)
T ss_pred HHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHH-------------HhchhhHHHHHHHHHHHHHHHHHHhcc
Confidence 6788899999999999999999999999999999999984 4566667776666555544 4444779
Q ss_pred cCCCCChhhhccC
Q 010112 505 ESKGRSLEELSRN 517 (518)
Q Consensus 505 ~~~~~~~~~~~~~ 517 (518)
++|+++++|++++
T Consensus 401 ~~~~~~~~~~~~~ 413 (417)
T PRK10489 401 ELRRFRQTPPEVD 413 (417)
T ss_pred cccccccccccCC
Confidence 9898888888765
No 37
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=1.7e-31 Score=255.76 Aligned_cols=390 Identities=14% Similarity=0.130 Sum_probs=278.3
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhh-hhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchh
Q 010112 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGR-IYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRK 98 (518)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr 98 (518)
-.++.+.+..++.++.......++++.+.+.+ ++ ++|++|.+++.+++.+++.++.++.|++.||+|.|
T Consensus 31 ~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~----------~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R 100 (462)
T PRK15034 31 IARRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGF----------NFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR 100 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 34567778888888888999999999998876 78 99999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhhc-----cCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHH
Q 010112 99 KVYGITLILMVISSIASGLS-----FGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (518)
Q Consensus 99 ~~~~~~~~l~~i~~~~~~~~-----~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 173 (518)
+++.++.+++++.+++.+++ ++ ++.+++.|++.|++ +..++.....+++|+|+++||+++|+.....+
T Consensus 101 ~v~~~~~ll~~i~~~~~~~a~~~~~~s------~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~ 173 (462)
T PRK15034 101 RWTVFSTAILIIPCVWLGIAVQNPNTP------FGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGN 173 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccCCC------HHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHh
Confidence 99999999999999999986 56 79999999999997 77889999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHH-----hhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH-hcCCCCcchhhhhh
Q 010112 174 FGILAGGIVALIVS-----SAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR-MRMPETARYTALVA 247 (518)
Q Consensus 174 lG~~lg~~l~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~ 247 (518)
+|..+++++...+. ...+..... . ...+..+||...++.+++.++..++. ++.+|.|+. +
T Consensus 174 ~G~~l~~~l~p~~i~~~l~~~~G~~~~~-----~-----~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~~----~ 239 (462)
T PRK15034 174 LGVSVMQLVAPLVIFVPVFAFLGVNGVP-----Q-----ADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIASS----R 239 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcccccc-----c-----cccchHHHHHHHHHHHHHHHHHHHHHHHhCCCcccc----c
Confidence 88887777766544 222210000 0 00124558988888777776655443 344443311 1
Q ss_pred ccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhc
Q 010112 248 KNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIG 327 (518)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 327 (518)
.+.++. .+.+|++ ..|.+++.+++....+.++..+.|.+.++ .
T Consensus 240 ~~~~~~-----------------------------~~vlk~~-------~~Wllslly~~tFG~fvg~s~~lp~~~~~-~ 282 (462)
T PRK15034 240 ASIADQ-----------------------------LPVLQRL-------HLWLLSLLYLATFGSFIGFSAGFAMLAKT-Q 282 (462)
T ss_pred cCHHHH-----------------------------HHHhCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 111110 0111222 34667777777777777788788888766 2
Q ss_pred CCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHH
Q 010112 328 WIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFV 407 (518)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (518)
++... .........+...+.++++|+++||+|+|+.+..+.+.+.++......... .....+.....
T Consensus 283 ~~~~~------------~l~~~~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp-~~~~~~~~~~~ 349 (462)
T PRK15034 283 FPDVN------------ILRLAFFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLP-GTGSGNFIAFY 349 (462)
T ss_pred cChHH------------HHHHHHHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-cccccHHHHHH
Confidence 22110 011223334556667889999999999999999888777666544322221 00011223333
Q ss_pred HHHHHHHHHHhcCccceeeeccccccch---------------------hhhhhHHHHHHHHHHHHHHHHHhhhHhhhhc
Q 010112 408 IMYSLTFFFANFGPNATTFVVPAEIFPA---------------------RLRSTCHGISAAAGKAGAIVGAFGFLYAAQS 466 (518)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~---------------------~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 466 (518)
..+...+...+.+ +...+-++.+++|+ ++.|.+.|+....+.+|+++.|.+.|...+.
T Consensus 350 ~~~~~l~~~~G~g-ngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~ 428 (462)
T PRK15034 350 AVFMGLFLTAGLG-SGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNM 428 (462)
T ss_pred HHHHHHHHHhccc-chHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHH
Confidence 3333333444444 33455667777764 2578899999999999999999999999876
Q ss_pred CCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhc
Q 010112 467 KDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCV 503 (518)
Q Consensus 467 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (518)
+| ++...|+.+.+..++|.++.+..
T Consensus 429 ~g------------~~~~~~~~~~~~~~~~~~~~w~~ 453 (462)
T PRK15034 429 TG------------SPVGAMKVFLIFYIVCVLLTWLV 453 (462)
T ss_pred cC------------CcHHHHHHHHHHHHHHHHHHHHH
Confidence 66 67888999999999999888844
No 38
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=3.6e-32 Score=268.06 Aligned_cols=407 Identities=13% Similarity=0.122 Sum_probs=266.7
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhh
Q 010112 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKK 99 (518)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~ 99 (518)
.++..+..+.+.....+.++..+....|.+++ + |+++++.+++.+++.++..+++++.|+++||+|||+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~----------g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~ 92 (438)
T TIGR00712 24 LRWQVFLGIFFGYAAYYLVRKNFALAMPYLVE-Q----------GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRV 92 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHhhhHHHHH-c----------CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCce
Confidence 34566666667777788888878888887764 6 899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHH
Q 010112 100 VYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (518)
Q Consensus 100 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg 179 (518)
++..+.++.+++.++.++.++. .++++.+.+.|++.|++.+...+.....+.|++|+++|++++++.+.+..+|..++
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~ 170 (438)
T TIGR00712 93 FLPAGLILSAAVMLLMGFVPWA--TSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIP 170 (438)
T ss_pred ehHHHHHHHHHHHHHHhccccc--cchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHH
Confidence 9999999999998887765321 01167788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHH-HHHhcCCCCcchhhhhhccHHHHHHHHH
Q 010112 180 GIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTY-YWRMRMPETARYTALVAKNAKQAAADMS 258 (518)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (518)
+.+.+..... ..+||..|++.++++++.. +..+++||+|+.. ..++.++.++
T Consensus 171 ~~l~~~~~~~----------------------~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~--- 223 (438)
T TIGR00712 171 PLLVLLGMAW----------------------FNDWHAALYFPAICAIIVALFAFAMMRDTPQSC--GLPPIEEYRN--- 223 (438)
T ss_pred HHHHHHHHHH----------------------hhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhc--CCCCchhccc---
Confidence 8877655421 2349999999888776654 4456678876531 1011000000
Q ss_pred HHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhh
Q 010112 259 KVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNA 337 (518)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 337 (518)
+..++..+ + .+.+.+..+.+.+...++ +.++......++.....++...+.|.++++ .|+++.+.+
T Consensus 224 -----~~~~~~~~--~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~--- 290 (438)
T TIGR00712 224 -----DYPDDYNE--K-AEQELTAKEIFMQYVLPN--KLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSS--- 290 (438)
T ss_pred -----cccccccc--c-cccccchHHHHHHHHccC--chHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHH---
Confidence 00000000 0 000001111111111222 223333333344445556777788998886 466655422
Q ss_pred hHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHH---HHHHhhccccccCCCchhHHHHHHHHHH
Q 010112 338 IHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVF---MFALAIPYHHWTLKPNRIGFVIMYSLTF 414 (518)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (518)
.......+..+++.++++++.||+++++....+....... .+.+.... ..+....... .+..
T Consensus 291 ---------~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~ 355 (438)
T TIGR00712 291 ---------WAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNP-----AGNPLVDMIC-MIVI 355 (438)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcC-----CCchHHHHHH-HHHH
Confidence 2555666778888999999999996543222232222111 11111111 0111211111 1112
Q ss_pred HHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHH-HHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHH
Q 010112 415 FFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGA-IVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVN 493 (518)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~-~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (518)
+....+..........|.+|++.|+++.|+.+..+++++ +++|.+.|.+.| ..||...+.+.+++.
T Consensus 356 g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~-------------~~g~~~~~~~~~~~~ 422 (438)
T TIGR00712 356 GFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVD-------------FFGWDGGFMVMIGGS 422 (438)
T ss_pred HHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHH-------------hccchHHHHHHHHHH
Confidence 222222222222456789999999999999999988875 689999999984 557888888888888
Q ss_pred HHHHHHHh-hcccCC
Q 010112 494 FVGMICTL-CVPESK 507 (518)
Q Consensus 494 ~~~~~~~~-~~~~~~ 507 (518)
+++.+..+ .++|.|
T Consensus 423 ~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 423 ILAVILLIVVMIGEK 437 (438)
T ss_pred HHHHHHHHHHHhhcc
Confidence 78777776 666654
No 39
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=8.6e-32 Score=260.69 Aligned_cols=368 Identities=13% Similarity=0.106 Sum_probs=257.4
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHH
Q 010112 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGIT 104 (518)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~ 104 (518)
+....+..+..+..+....+.+|.+++++ |.+.++.|++.+.+.+++.+++++.|+++||+|||+++..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 74 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDV----------GISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFL 74 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHc----------CCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHH
Confidence 44555677778888888899999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 010112 105 LILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVAL 184 (518)
Q Consensus 105 ~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~ 184 (518)
.++.+++.++++++++ ++.+++.|+++|++.+...+....++.|++|+++|++++++...+..+|..+++++++
T Consensus 75 ~~~~~~~~~l~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~ 148 (382)
T PRK10091 75 VALCVIGNAMFTLSSS------YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGT 148 (382)
T ss_pred HHHHHHHHHHHHHhCc------HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHH
Confidence 9999999999999998 7999999999999999888888999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhh
Q 010112 185 IVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQV 263 (518)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~ 263 (518)
.+.+. .+||+.|++.++..++..+. .+++||.++. .+++.++ .
T Consensus 149 ~l~~~-----------------------~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~---~~~~~~~---~------- 192 (382)
T PRK10091 149 YLSQE-----------------------FSWRYTFLLIAVFNIAVLASIYFWVPDIRDE---AKGGLRE---Q------- 192 (382)
T ss_pred HHhhh-----------------------ccHHHHHHHHHHHHHHHHHHHHHhCCCCCcc---cccCHHH---H-------
Confidence 88643 44999999988776655443 4557775431 0000000 0
Q ss_pred hcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHH
Q 010112 264 ELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVY 342 (518)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~ 342 (518)
.+.++++. .+......+......+....+.+.++. ..|+++..
T Consensus 193 -------------------~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~---------- 236 (382)
T PRK10091 193 -------------------FHFLRSPA-------PWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETS---------- 236 (382)
T ss_pred -------------------HHHhcChH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH----------
Confidence 00011111 111111112222222222233344444 35665543
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCcc
Q 010112 343 KIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPN 422 (518)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (518)
.........++.+++.++.+++.||+++|+.+..+..+.+++.+++..... ..........+..........
T Consensus 237 --~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~~~g~~~~~~ 308 (382)
T PRK10091 237 --MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIAAVTDFIIVLALLMLFFFGG------MKTASLIFAFICCAGLFALSA 308 (382)
T ss_pred --HHHHHHHHHHHHHHHhHHHheeccccCchhHHHHHHHHHHHHHHHHHHHHh------hHHHHHHHHHHHHHHHHhhhH
Confidence 223566677788889999999999999999988887777766655443221 112222222222221111112
Q ss_pred ceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 010112 423 ATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLC 502 (518)
Q Consensus 423 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (518)
+.......+..|++.++.+ ..+...++|..++|.+.|.+.|. ..+|+..+.+.++++++.......
T Consensus 309 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~------------~~~~~~~~~~~~~~~~~~~~~~~~ 374 (382)
T PRK10091 309 PLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTL------------GLAYNYVALPAALLSFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHc------------ccCcchHHHHHHHHHHHHHHHHHH
Confidence 2222334455455555554 34667889999999999999863 347888888887777776665553
No 40
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-31 Score=243.24 Aligned_cols=393 Identities=16% Similarity=0.209 Sum_probs=305.0
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc
Q 010112 16 KTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL 95 (518)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~ 95 (518)
..++.+++.+.+..++..+.......++++.+.+.+++ ++|+.|.+++.++..+..++.-++.|.+.||+
T Consensus 7 ~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~~~----------~LS~~q~~ll~aiPil~GallRl~~g~l~drf 76 (417)
T COG2223 7 RGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKSDF----------GLSEGQKGLLVAIPILVGALLRLPYGFLTDRF 76 (417)
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc----------CCCHHHHHHHHHHHHHHhHHHHHHHHhhhccc
Confidence 34455667777888888888888999999999999999 99999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHH
Q 010112 96 GRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (518)
Q Consensus 96 Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG 175 (518)
|.|++..++.++..+.++..+++..+.+ ++++++++++.|++ |..+.+...++++|+|++++|.++|+.. ..|+|
T Consensus 77 GgR~~~~~s~~l~~IP~~~~~~a~~~~~---~~~ll~~gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G 151 (417)
T COG2223 77 GGRKWTILSMLLLLIPCLGLAFAVTYPS---TWQLLVIGLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLG 151 (417)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHccCCc---hHHHHHHHHHHhcc-cceehcccccccccCChhhhhHHHHHhc-ccccc
Confidence 9999999999999999999999887532 46999999999996 5578999999999999999999999999 89999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHH-HHHhcCCCCcchhhhhhccHHHHH
Q 010112 176 ILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTY-YWRMRMPETARYTALVAKNAKQAA 254 (518)
Q Consensus 176 ~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~ 254 (518)
..+...++..+....+. ..||....+..+..++.. ..++...|.|+.. ...++.+.
T Consensus 152 ~av~q~~~P~v~~~~g~--------------------~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r--~~~~~~~~- 208 (417)
T COG2223 152 VAVAQLVAPLVAVAFGF--------------------LAWRNVAGIYVVALAIAAVLAWLGMNDVPEHR--ASVKPQLP- 208 (417)
T ss_pred HHHHHHHHHHHHHHHhh--------------------HHHHHHHHHHHHHHHHHHHHHHHHhCCChhhh--ccccccch-
Confidence 99999999998865441 028888888777666644 4456677776531 11110000
Q ss_pred HHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCc
Q 010112 255 ADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAA 333 (518)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 333 (518)
. .++....+ +..|.+.+.++.....+.++..+.|.++++ ++.++...
T Consensus 209 ~-----------------------------~~~~v~~~---~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~A 256 (417)
T COG2223 209 A-----------------------------QLKAVFSN---KDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTA 256 (417)
T ss_pred h-----------------------------HHHHHhcC---cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhH
Confidence 0 00111111 245777888888888888899999999886 67776653
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHH
Q 010112 334 TMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLT 413 (518)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (518)
+. ......+.+.+.++++|+++||+|.+|.+...+..++++..+............+....+..+...
T Consensus 257 g~------------~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l 324 (417)
T COG2223 257 GL------------IAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLAL 324 (417)
T ss_pred HH------------HHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHH
Confidence 32 445555555668899999999999999999999999988888876653222223344445545555
Q ss_pred HHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHH
Q 010112 414 FFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVN 493 (518)
Q Consensus 414 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (518)
..+.+.+ +...+.++..++|+ +.|.+.|+...++.+|++.-|...+...+.++ .+...|+++..+.
T Consensus 325 ~~~~G~G-nGsvfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg------------~~~~~f~~~~~~~ 390 (417)
T COG2223 325 FVFAGLG-NGSVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG------------SYTGAFMLLLAFY 390 (417)
T ss_pred HHHhccC-cchheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcc------------cHHHHHHHHHHHH
Confidence 5555555 45667788888766 57999999999999999999999999997555 6888999999999
Q ss_pred HHHHHHHhhcc
Q 010112 494 FVGMICTLCVP 504 (518)
Q Consensus 494 ~~~~~~~~~~~ 504 (518)
+++.+..+.+.
T Consensus 391 ~~a~v~~~~~y 401 (417)
T COG2223 391 LVALVLTWALY 401 (417)
T ss_pred HHHHHHHHHHH
Confidence 99998887443
No 41
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=4.2e-31 Score=256.16 Aligned_cols=366 Identities=13% Similarity=0.123 Sum_probs=252.3
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhH
Q 010112 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKV 100 (518)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~ 100 (518)
.|+.++.+.++.+..........+.+|.+.+++ |+++++.++..+.+.++..+++++.|.++||+|||++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~ 87 (394)
T PRK10213 18 NWSAVFSVAFCVACLIIVEFLPVSLLTPMAQDL----------GISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYV 87 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHH
Confidence 555555555555555556656667788999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 010112 101 YGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (518)
Q Consensus 101 ~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~ 180 (518)
+..+.++.+++.+++.++++ ++.++++|+++|++.+...+...+++.|++|+++|+++.++...+.++|..++|
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~ 161 (394)
T PRK10213 88 VILFAVLLTLSCLLVSFANS------FSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAA 161 (394)
T ss_pred HHHHHHHHHHHHHHHHHHCh------HHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888 899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHH
Q 010112 181 IVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSK 259 (518)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (518)
.+++.+.+. ++||+.|++.++++++..+. ....||+|++. ++..+
T Consensus 162 ~l~~~l~~~-----------------------~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~---~~~~~-------- 207 (394)
T PRK10213 162 PLGSFLGEL-----------------------IGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEP---SHQKQ-------- 207 (394)
T ss_pred HHHHHHHhh-----------------------cCHHHHHHHHHHHHHHHHHHHHHHCCCCCccc---ccchh--------
Confidence 999999754 34999999987766655443 33467654320 00000
Q ss_pred HHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhh-HHHHHHHhcCCCCCcchhhh
Q 010112 260 VLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLF-QKDIFSAIGWIPPAATMNAI 338 (518)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~ 338 (518)
+.++.++++. ++......+......+....+ .|.+.++.|+++...+.
T Consensus 208 ---------------------~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~--- 256 (394)
T PRK10213 208 ---------------------NTFRLLQRPG-------VMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTL--- 256 (394)
T ss_pred ---------------------HHHHHhcCHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHH---
Confidence 0011112221 122222222222333333344 46676667777654222
Q ss_pred HHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHH-HHHHhhccccccCCCchhHHHHHHHHHHHHH
Q 010112 339 HEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVF-MFALAIPYHHWTLKPNRIGFVIMYSLTFFFA 417 (518)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (518)
......++.+++.++.+++.||.++ +.+..+..+..++ .++..... +.+.......+. +..
T Consensus 257 ---------~~~~~~~~~iig~~~~~~l~~r~~~-~~l~~~~~~~~~~~~~l~~~~~-------~~~~~~~~~~l~-G~~ 318 (394)
T PRK10213 257 ---------VLLSFGIASFVGTSLSSFILKRSVK-LALAGAPLVLAVSALVLTLWGS-------DKIVATGVAIIW-GLT 318 (394)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHHhccch-hHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHH-HHH
Confidence 5555667788888999999999644 4433333333333 23222222 122222222222 222
Q ss_pred hcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHH
Q 010112 418 NFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGM 497 (518)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 497 (518)
.....+...+.+.+..| +.++.+.++.....++|..+||.+.|.+.| ..|+...+...+.+.++..
T Consensus 319 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~-------------~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 319 FALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQLANTCGAAIGGYALD-------------NIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------ccChhhHHHHHHHHHHHHH
Confidence 22234444456667766 446677788888889999999999999984 5577777777666555544
Q ss_pred HH
Q 010112 498 IC 499 (518)
Q Consensus 498 ~~ 499 (518)
+.
T Consensus 385 ~~ 386 (394)
T PRK10213 385 LL 386 (394)
T ss_pred HH
Confidence 43
No 42
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.4e-31 Score=260.71 Aligned_cols=365 Identities=15% Similarity=0.061 Sum_probs=249.9
Q ss_pred HHHHHHhhhhhhhHHHHHHHhh-hhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHH
Q 010112 27 IAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITL 105 (518)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~ 105 (518)
.+.++.++.........+.+|. +.+++ |.|..+.|++.+++.+++.+++++.|+++||+||||++..+.
T Consensus 19 ~~~~~~~~~~~~~~~~~p~l~~~l~~~l----------g~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~ 88 (392)
T PRK12382 19 RIAFAVFLTYMTVGLPLPVIPLFVHHDL----------GFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGM 88 (392)
T ss_pred HHHHHHHHHHHHHHHHhhhhhHHHHHhc----------CCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHH
Confidence 3444455556666677777775 57788 999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHhh---hccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 010112 106 ILMVISSIASG---LSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIV 182 (518)
Q Consensus 106 ~l~~i~~~~~~---~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l 182 (518)
++..++.+... ..+.. ...+++.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~ 167 (392)
T PRK12382 89 LACGLAGLAYLLAAILPVS-APFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPL 167 (392)
T ss_pred HHHHHHHHHHHhhhccccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHH
Confidence 88777655332 22110 011278899999999999998888899999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHh
Q 010112 183 ALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQ 262 (518)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~ 262 (518)
++.+.+. .+||..+.+..+..++........||.++. +++++
T Consensus 168 ~~~l~~~-----------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~----------- 209 (392)
T PRK12382 168 GLLLHSH-----------------------FGFAALALTTMVLPLLAWAFNGTVRKVPAH----AGERP----------- 209 (392)
T ss_pred HHHHHhc-----------------------cChHHHHHHHHHHHHHHHHHHHhccCCCCC----cccCc-----------
Confidence 9988643 349988776555443333322223332211 00000
Q ss_pred hhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHH
Q 010112 263 VELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVY 342 (518)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 342 (518)
+.++..+ . .++ . ..........+.....+.+.++++.+++..
T Consensus 210 ------------------~~~~~~~-~-~~~---~----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~----------- 251 (392)
T PRK12382 210 ------------------SLWSVVG-L-IWK---P----GLGLALQGVGFAVIGTFVSLYFASKGWAMA----------- 251 (392)
T ss_pred ------------------hHHHHHH-H-HHH---h----HHHHHHHHHHHhHHHHHHHHHHHhcCCchh-----------
Confidence 0000000 0 000 0 011111222333444556666666544321
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCcc
Q 010112 343 KIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPN 422 (518)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (518)
........++.+++.++.+++.||+|+|+.+..+..+.+++.+++.... +.........+.+... ....
T Consensus 252 ---~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~g~~~-~~~~ 320 (392)
T PRK12382 252 ---GFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAP-------TAWVALAGAALTGAGC-SLIF 320 (392)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcc-------cHHHHHHHHHHHHHHH-HhHH
Confidence 1123344556677888999999999999998888887777766655432 2222222222222222 2234
Q ss_pred ceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 010112 423 ATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLC 502 (518)
Q Consensus 423 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (518)
+...+...|.+|+++|+++.|+.+...++|..++|.+.|.+. +..||+..|.+.+++.+++.+..++
T Consensus 321 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~-------------~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (392)
T PRK12382 321 PALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLA-------------TSFGYPSVFLAGAISAVLGIIVTIL 387 (392)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHhCchHHHHHHHHHHHHHHHHHHh
Confidence 445566778889999999999999999999999999999998 4568999999998888888776653
No 43
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=3.1e-31 Score=264.69 Aligned_cols=382 Identities=12% Similarity=0.082 Sum_probs=258.7
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHH
Q 010112 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGIT 104 (518)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~ 104 (518)
++.++++.++..++...+++..|.+.+++ |.+..+.+++.+.+.++..++.+++|+++||+|||+++..+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~ 81 (471)
T PRK10504 12 LWIVAFGFFMQSLDTTIVNTALPSMAQSL----------GESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTA 81 (471)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHh----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHH
Confidence 45566778888899999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 010112 105 LILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVAL 184 (518)
Q Consensus 105 ~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~ 184 (518)
.++.+++.+++.++++ ++.+++.|+++|++.+...+....++.|++|+++|+++.++.....++|..++|.+++
T Consensus 82 ~~~~~~~~~~~~~~~~------~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g 155 (471)
T PRK10504 82 IVLFTLGSLFCALSGT------LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGG 155 (471)
T ss_pred HHHHHHHHHHHHHhCC------HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 9999999999998887 7999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHH----HHHH
Q 010112 185 IVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAA----DMSK 259 (518)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~----~~~~ 259 (518)
.+.+.. +||+.|++.....++..+. ....|+.+.. ..+.+...... ....
T Consensus 156 ~l~~~~-----------------------gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~--~~r~~~~~~~~~~~~~~~~ 210 (471)
T PRK10504 156 LLVEYA-----------------------SWHWIFLINIPVGIIGAIATLMLMPNYTMQ--TRRFDLSGFLLLAVGMATL 210 (471)
T ss_pred HHHhhc-----------------------cHHHHHHHHHHHHHHHHHHHHHhCCCcccc--CCCCChHHHHHHHHHHHHH
Confidence 987533 4999999977766655444 3344544321 11111110000 0000
Q ss_pred HHhhhcchh----hh---------------HhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHH
Q 010112 260 VLQVELEAE----ED---------------KVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQK 320 (518)
Q Consensus 260 ~~~~~~~~~----~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (518)
....+..+. .. ...+++. ...+.+..+.++++ .+.......++....+.....+.|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~~--~~~~~l~~~~~~~~~~~~~~~~~~ 285 (471)
T PRK10504 211 TLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARN---NNRALFSLKLFRTR--TFSLGLAGSFAGRIGSGMLPFMTP 285 (471)
T ss_pred HHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhc---CCCCccCHHHhccc--chHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 00 0000000 00111111111111 112222223333334444555677
Q ss_pred HHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccC
Q 010112 321 DIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTL 399 (518)
Q Consensus 321 ~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (518)
.+++. .|.++.. .........++.+++.++.+++.||+|||+.+..+..+.++...++.....
T Consensus 286 ~~~~~~~g~~~~~------------~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---- 349 (471)
T PRK10504 286 VFLQIGLGFSPFH------------AGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL---- 349 (471)
T ss_pred HHHHHHcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc----
Confidence 77764 5555433 223555666667777788999999999999998888877776665554321
Q ss_pred CCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 010112 400 KPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP 469 (518)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 469 (518)
............+.+..... ..+....+..+.+|++.++.+.|+.++...+|..+++.+.|.+.+..+.
T Consensus 350 ~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~ 418 (471)
T PRK10504 350 LGWYYLLPFVLFLQGMVNST-RFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQ 418 (471)
T ss_pred cccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 11111111112222222222 2334456677888999999999999999999999999999999876653
No 44
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=3.6e-32 Score=268.37 Aligned_cols=400 Identities=13% Similarity=0.081 Sum_probs=265.9
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc
Q 010112 16 KTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL 95 (518)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~ 95 (518)
+...++|.++..+.+.......+...++...|.+.+++ +.+.++.+++.+.+.++..++.++.|+++||+
T Consensus 12 ~~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~----------g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~ 81 (455)
T TIGR00892 12 PDGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQIF----------QATYSETAWISSIMLAVLYAGGPISSILVNRF 81 (455)
T ss_pred CCCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHHHh----------CcchhHHHHHHHHHHHHHHHhhHHHHHHHHHc
Confidence 44456777777777776666666677888899999999 99999999999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHH-HHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHH
Q 010112 96 GRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCF-FRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174 (518)
Q Consensus 96 Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~l 174 (518)
|||++++.+.++.++++++++++++ ++.+++ .|+++|++.+...+...+++.++++ ++|+++.++...+..+
T Consensus 82 g~r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~ 154 (455)
T TIGR00892 82 GCRPVVIAGGLLASLGMILASFSSN------VIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPV 154 (455)
T ss_pred CchHHHHhhHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccH
Confidence 9999999999999999999999888 677654 5799999999877788888999996 7899999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcC-CCCcchhhhhhccHHHH
Q 010112 175 GILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRM-PETARYTALVAKNAKQA 253 (518)
Q Consensus 175 G~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~esp~~~~~~~~~~~~~ 253 (518)
|..+++.+++.+.+..+ ||+.|++.+++.++..+..+++ ++.+.. + ..+++.
T Consensus 155 g~~~~~~l~~~l~~~~g-----------------------wr~~f~~~~~~~~~~~v~~~~~~~~~~~~---~-~~~~~~ 207 (455)
T TIGR00892 155 FLSTLAPLNQYLFESFG-----------------------WRGSFLILGGLLLHCCVCGALMRPVGPSQ---R-VSKSKS 207 (455)
T ss_pred HHHHHHHHHHHHHHHhC-----------------------hHHHHHHHHHHHHHHHHHHHHhCCCCccc---c-cccccc
Confidence 99999999998875444 9999999888776654443333 322211 0 000000
Q ss_pred HHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCc
Q 010112 254 AADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAA 333 (518)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 333 (518)
.+. .+.+... ++.+. +...+...+....+.+++ +.++......+.....++....+.+.+.++.|+++.+.
T Consensus 208 ~~~----~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~s~~~~ 278 (455)
T TIGR00892 208 KEG----LPPDGST--KKLSK-KSTAEKINRFLDFSLFTH--RGFLVYLSGNVIMFLGFFAPIIFLVPYAKDKGVDEYEA 278 (455)
T ss_pred ccc----CCCCCcc--ccccc-cchhhhhhhhcchHHhcC--chHHHHHHHHHHHHHHccchHHHHHHHHHHcCCCHHHH
Confidence 000 0000000 00000 000000000000011111 12233333444444555666677788877777665442
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhc--cChhHHHHHH--HHHHHHHHHHhhccccccCCCchhHHHHH
Q 010112 334 TMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYM--GRFAIQMMGF--FFMTVFMFALAIPYHHWTLKPNRIGFVIM 409 (518)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~--g~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (518)
+ .......++.+++.++++++.||. ++|+....+. .+.+++.++..... +.+.. .+
T Consensus 279 g------------~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-------~~~~~-~i 338 (455)
T TIGR00892 279 A------------FLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAG-------DYTGL-VI 338 (455)
T ss_pred H------------HHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhc-------hHHHH-HH
Confidence 2 255556677778888899999973 3343333322 22223222222221 22222 22
Q ss_pred HHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHH
Q 010112 410 YSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIML 489 (518)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~ 489 (518)
..+..+.......+..++++.|.+|++++++++|+.+...++|.+++|.+.|.+.+..+ +|+..|.+.
T Consensus 339 ~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g------------~~~~~f~~~ 406 (455)
T TIGR00892 339 YCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK------------NYKYIFYAS 406 (455)
T ss_pred HHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC------------CcchHHHHh
Confidence 33333333333455667788899999999999999999999999999999999985332 588888887
Q ss_pred HHHHHHHHHHH
Q 010112 490 GVVNFVGMICT 500 (518)
Q Consensus 490 ~~~~~~~~~~~ 500 (518)
+++.+++.+..
T Consensus 407 ~~~~li~~~~~ 417 (455)
T TIGR00892 407 GSIVVSAGLFL 417 (455)
T ss_pred hHHHHHHHHHH
Confidence 77776665543
No 45
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=3.8e-30 Score=251.71 Aligned_cols=360 Identities=14% Similarity=0.061 Sum_probs=249.4
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcch
Q 010112 18 QLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGR 97 (518)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Gr 97 (518)
++..+...+.+.+..++..++...+.+..|.+.+++ +.+..+.++..+.+.+++.+++++.|+++||+||
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~ 77 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVEDF----------NAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGR 77 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 344556666777778888888888889999999999 9999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHH
Q 010112 98 KKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (518)
Q Consensus 98 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~ 177 (518)
|+++..+..+.+++.+++.++++ ++.+++.|+++|++.+...+....++.|++|+++|++..++......+|..
T Consensus 78 r~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (406)
T PRK15402 78 RPVMLAGVAFFILTCLAILLAQS------IEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPL 151 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888 799999999999999988889999999999999999999999888889999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHH
Q 010112 178 AGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAAD 256 (518)
Q Consensus 178 lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~ 256 (518)
++|.+++.+.+. .+||+.|++.++..++..+. .+..||+++.. +++.+ .++
T Consensus 152 ~g~~i~~~l~~~-----------------------~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~ 203 (406)
T PRK15402 152 LGPLVGAALIHV-----------------------LPWRGMFVLFAALAALSFFGLWRAMPETAGRV--GEKLS---LKE 203 (406)
T ss_pred HHHHHHHHHHHc-----------------------cCccHHHHHHHHHHHHHHHHHHHhCCCCCccc--ccccc---HHH
Confidence 999999888743 34999999887777665443 34567765321 00000 000
Q ss_pred HHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcch
Q 010112 257 MSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATM 335 (518)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~ 335 (518)
.. + +.++.++++ .++......+...........+.|.++.+ .++++.+.
T Consensus 204 ~~-----------~----------~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~-- 253 (406)
T PRK15402 204 LG-----------R----------DYKLVLKNR-------RFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEY-- 253 (406)
T ss_pred HH-----------H----------HHHHHHcCc-------HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHH--
Confidence 00 0 001111221 12222222222223333344455666543 55554321
Q ss_pred hhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHH
Q 010112 336 NAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFF 415 (518)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (518)
+. ......++.+++.++.+++.||+++|+.+..+..+..++..++..... . ...+.........+.+.
T Consensus 254 ---------g~-~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~-~-~~~~~~~~~~~~~~~g~ 321 (406)
T PRK15402 254 ---------GL-LQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATV-I-SSHAYLWLTAGLSLYAF 321 (406)
T ss_pred ---------HH-HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-c-ccccHHHHHHHHHHHHH
Confidence 11 333444567778889999999999999988887777666665554321 0 01112222222222222
Q ss_pred HHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 416 FANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 416 ~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
.... ..+........ .+++++|++.++.+....++..+++.+.+.+.+
T Consensus 322 g~~~-~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~ 369 (406)
T PRK15402 322 GIGL-ANAGLYRLTLF-SSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYL 369 (406)
T ss_pred HHHH-HhhhHHHHHhh-hccccccHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2222 22333233333 345789999999999999999999999999874
No 46
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=9.8e-32 Score=261.16 Aligned_cols=364 Identities=14% Similarity=0.150 Sum_probs=246.8
Q ss_pred HHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHH
Q 010112 30 MGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMV 109 (518)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~ 109 (518)
++++..++++..+++..|.+.+++ +.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~ 71 (379)
T TIGR00881 2 IGYAAYYLVRKNFALAMPYLVEEI----------GLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCA 71 (379)
T ss_pred chhhHHHHhHHhhhhhhHHHHHHh----------CCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHH
Confidence 346677888999999999999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHH-HHHHHHHh
Q 010112 110 ISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG-IVALIVSS 188 (518)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~-~l~~~l~~ 188 (518)
++.++++++++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++...+..+|..+++ .++..+.+
T Consensus 72 ~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 145 (379)
T TIGR00881 72 IVNLFFGFSTS------LWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE 145 (379)
T ss_pred HHHHHHHHhhh------HHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh
Confidence 99999999998 799999999999999999999999999999999999999999999999999999 46655543
Q ss_pred hcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHH-HHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcch
Q 010112 189 AFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALT-YYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEA 267 (518)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (518)
..+||+.|++.+++.++. ++..++.||+|+.... ++.++..+ .+.++
T Consensus 146 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-------~~~~~ 193 (379)
T TIGR00881 146 -----------------------LYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGL--PPAEEMPN-------EEPDG 193 (379)
T ss_pred -----------------------cCCchhHHHHHHHHHHHHHHHHheeeCCCcccccc--CccccCcc-------ccccc
Confidence 345999999887766654 3445566776653111 11000000 00000
Q ss_pred hhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHH
Q 010112 268 EEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIAR 346 (518)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 346 (518)
+ + ++ ++++.+.++...+...++ +.++...+..+...........+.|.++.+ .|+++.+ ..
T Consensus 194 ~--~-~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~------------~~ 255 (379)
T TIGR00881 194 D--A-EK-KEEELTKKQIFLQYVLLN--KVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK------------AS 255 (379)
T ss_pred c--c-cc-ccccccchHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH------------HH
Confidence 0 0 00 000001111111111111 223334444444445555666677777754 4665543 22
Q ss_pred HHHHHHHhhcccchhhhhhhhhhccC-hhHHHHHHHH--HHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccc
Q 010112 347 AQTLIALCSTVPGYWFTVAFIDYMGR-FAIQMMGFFF--MTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNA 423 (518)
Q Consensus 347 ~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518)
.......++.+++.++.+++.||..+ |+........ ..++........ ..+ ........+..+....+..+
T Consensus 256 ~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~g~~~~~~~~ 329 (379)
T TIGR00881 256 WAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNP-----AAN-PLMDLICLFALGFLVYGPQM 329 (379)
T ss_pred HHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCc-----chh-HHHHHHHHHHHHHHHhhhhH
Confidence 35666677888999999999998643 3332221111 111111111111 011 11222222222223333444
Q ss_pred eeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 424 TTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
....+..|.+|++.|+++.|+.+...++|..++|.+.|.+.|
T Consensus 330 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~ 371 (379)
T TIGR00881 330 LIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLAD 371 (379)
T ss_pred HHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHH
Confidence 455678899999999999999999999999999999999984
No 47
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-30 Score=251.94 Aligned_cols=371 Identities=14% Similarity=0.184 Sum_probs=271.5
Q ss_pred CCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhh
Q 010112 60 KKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGF 139 (518)
Q Consensus 60 ~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 139 (518)
+.+++++..+.+++.+.+++|+.+++++.|+++||+|-|+++..+.++.++++++...+.+.+ ++.+++.|++||+
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~----~~~~~~~R~lqGl 140 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIG----FYLLLVLRFLQGL 140 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhc----chhhHHHHHHhHH
Confidence 446789999999999999999999999999999999999999999999999999999987642 4678999999999
Q ss_pred ccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHH
Q 010112 140 GIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVL 219 (518)
Q Consensus 140 ~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f 219 (518)
+.|..+|+...+.++|.|++||++..++...+..+|.+++.++++.+.+. ..||+..|
T Consensus 141 ~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s----------------------~~GW~sif 198 (466)
T KOG2532|consen 141 GQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCES----------------------SLGWPSIF 198 (466)
T ss_pred HHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcc----------------------CCCCchHH
Confidence 99999999999999999999999999999999999999999999999843 46699999
Q ss_pred HhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHH
Q 010112 220 MVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHL 298 (518)
Q Consensus 220 ~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (518)
++.++.+++..++ .++..|+|+.. +.-.+++.+.+++-... + +..++.+..++++++++ .+
T Consensus 199 Y~~g~~g~i~~~~w~~~~~d~P~~h---~~is~~El~~I~~~k~~----~----~~~~~~~vP~~~i~ts~-------~v 260 (466)
T KOG2532|consen 199 YVFGIVGLIWFILWFLFYSDSPSKH---PNISEKELKYIEKGKSE----A----HVKKKPPVPYKAILTSP-------PV 260 (466)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccC---CCCCHHHHHHHHhcccc----c----ccCCCCCCCHHHHHcCH-------HH
Confidence 9999988876555 45677888652 11111222221110000 0 00000122334444443 56
Q ss_pred HHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccC-----
Q 010112 299 FGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGR----- 372 (518)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~----- 372 (518)
|.+.+..++.+..++.+..+.|.|+++ ++++-.+.+. ...+..+...+..+++|.++||+.+
T Consensus 261 wai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~------------~salP~l~~~~~k~~~g~lsD~l~~~~ls~ 328 (466)
T KOG2532|consen 261 WAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGF------------LSALPFLAMAIVKFVAGQLSDRLTFRILSE 328 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhH------------HHHHHHHHHHHHHHHHHHHHHHHhhccCch
Confidence 778888888899999999999999997 6776665433 6666677777888899999998755
Q ss_pred ----hhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHH
Q 010112 373 ----FAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAA 448 (518)
Q Consensus 373 ----r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~ 448 (518)
|..-.++....+++++.+.+... ......++++.+..++.+. .............+++.+..+|+.+..
T Consensus 329 t~~rkifn~i~~~~~ai~l~~l~~~~~-----~~~~~a~~~l~~~~~~~g~--~~~Gf~~~~~~~apq~a~~l~g~~~~~ 401 (466)
T KOG2532|consen 329 TTVRKIFNTIAFGGPAVFLLVLAFTSD-----EHRLLAVILLTIAIGLSGF--NISGFYKNHQDIAPQHAGFVMGIINFV 401 (466)
T ss_pred HhHHHHHHhHHHHHHHHHHHeeeecCC-----CcchHHHHHHHHHHHHccc--chhhhHhhhhhccchHHHHHHHHHHHH
Confidence 22334445555555555554441 1222233333332232222 222222222222578899999999999
Q ss_pred HHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhc
Q 010112 449 GKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCV 503 (518)
Q Consensus 449 ~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (518)
..+.++++|.+.+.+.. .+ +...|+.+|++.+++.+++.+...+.
T Consensus 402 ~~~~~~~~P~~vg~~~~-~~---------t~~eW~~VF~i~a~i~~~~~i~f~~f 446 (466)
T KOG2532|consen 402 GALAGFIAPLLVGIIVT-DN---------TREEWRIVFLIAAGILIVGNIIFLFF 446 (466)
T ss_pred HHHHHHHHHHheeeEeC-CC---------CHHHHHHHHHHHHHHHHHhchheeEe
Confidence 99999999999999984 11 34589999999999999998766644
No 48
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=2.9e-30 Score=250.09 Aligned_cols=363 Identities=14% Similarity=0.163 Sum_probs=252.6
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHH
Q 010112 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGIT 104 (518)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~ 104 (518)
+..+.++.++...+.....+..|.+.+++ |.|..+.|++.+.+.++..+++++.|+++||+|||+++..+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~~~----------~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~ 77 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLAQE----------HLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLA 77 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 44555777788889999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 010112 105 LILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVAL 184 (518)
Q Consensus 105 ~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~ 184 (518)
.++.+++.++++++++ ++.++++|+++|++.+...+...+.+.+..++++|++++++.+.+.++|..+|+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 151 (381)
T PRK03633 78 SLIFAAGCAGLGLMVG------FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVS 151 (381)
T ss_pred HHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988 7999999999999999888888888889999999999999999999999999999998
Q ss_pred HHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHH-HHHhcCCCCcchhhhhhccHHHHHHHHHHHHhh
Q 010112 185 IVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTY-YWRMRMPETARYTALVAKNAKQAAADMSKVLQV 263 (518)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~-~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~ 263 (518)
.+.+... |+..+ ..+......+ +.....+|+++ + ++
T Consensus 152 ~l~~~~~-----------------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~-~~-------------- 188 (381)
T PRK03633 152 KVSTELM-----------------------SVLPW-VTGLVLAAILPLLFTRILNQQA----E-NH-------------- 188 (381)
T ss_pred ccccccc-----------------------chHHH-HHHHHHHHHHHHHHhcccCCCC----C-CC--------------
Confidence 8763211 22222 2222211111 11111222110 0 00
Q ss_pred hcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHH
Q 010112 264 ELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYK 343 (518)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (518)
...+..+.++++..+ . .....+.....+.....+.|.+.++.|.++...
T Consensus 189 --------------~~~~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~lp~~~~~~g~s~~~~---------- 237 (381)
T PRK03633 189 --------------DSTSIWPMLKLRQAR----L---GVNGCIISGIVLGSLYGLMPLYLNHQGMSDASI---------- 237 (381)
T ss_pred --------------CCCCHHHHHHhcchH----H---HHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH----------
Confidence 000111122222111 1 111111111223334456788877766554431
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccc
Q 010112 344 IARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNA 423 (518)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518)
+ .......++.+++.+..+++.||+++|+.+..+..+..++.+.+. .. .. ......+. +.......|
T Consensus 238 -g-~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~-~~--------~~-~~~~~~l~-g~~~~~~~p 304 (381)
T PRK03633 238 -G-FWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML-SQ--------AA-MAPALFIL-GAAGFTLYP 304 (381)
T ss_pred -H-HHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh-hh--------HH-HHHHHHHH-HHHHHhHHH
Confidence 2 244555667778888999999999999998887777666554432 11 11 11111111 222223456
Q ss_pred eeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhc
Q 010112 424 TTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCV 503 (518)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (518)
...+...|..|+++++.+.+..+...++|..++|.+.|.+.| ..+++..|.+.+.+.++..+..++.
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~-------------~~g~~~~f~~~~~~~l~~~~~~~~~ 371 (381)
T PRK03633 305 VAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQ-------------NYSDNLLFIMIASVSFIYLLMLLRK 371 (381)
T ss_pred HHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhCccHHHHHHHHHHHHHHHHHHhc
Confidence 677777888888888888888888889999999999999984 4577788888888777666554443
No 49
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=8.2e-31 Score=263.17 Aligned_cols=377 Identities=12% Similarity=0.114 Sum_probs=266.5
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHH
Q 010112 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGI 103 (518)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~ 103 (518)
++..++++.++..++....++..|.+.+++ |.+..+.+++.+.+.++..++.++.|+++||+|||+++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 72 (485)
T TIGR00711 3 LTIVLMLGTFMAVLDSTIVNVAIPTIAGDL----------GSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLI 72 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHH
Confidence 456677788899999999999999999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 010112 104 TLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVA 183 (518)
Q Consensus 104 ~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~ 183 (518)
+.++.+++.++++++++ ++.++++|+++|++.+...+...+++.|++|+++|+++.+++..+..+|..+++.++
T Consensus 73 ~~~~~~~~~~~~~~~~~------~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 146 (485)
T TIGR00711 73 STFAFTLGSLLCGVAPN------LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLG 146 (485)
T ss_pred HHHHHHHHHHHHhCcCC------HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccH
Confidence 99999999999999998 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHH-----
Q 010112 184 LIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADM----- 257 (518)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~----- 257 (518)
+++.+ .++||+.|++.+.++++..+. .++.||+++. . +++.+......
T Consensus 147 ~~l~~-----------------------~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~d~~g~~l~~~~~ 200 (485)
T TIGR00711 147 GWIIE-----------------------NYHWRWIFLINVPIGIIVVVVAFFILPRDKPA--A-SENFDFLGLLLLSVGL 200 (485)
T ss_pred hHhcc-----------------------CcCceehhhhhhHHHHHHHHHHHHHcCCcccc--c-cCCCcHHHHHHHHHHH
Confidence 98863 345999999987777665444 4456664432 1 11111110000
Q ss_pred ---HHH-Hhhhcchh--hhH-----------------hhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q 010112 258 ---SKV-LQVELEAE--EDK-----------------VAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYS 314 (518)
Q Consensus 258 ---~~~-~~~~~~~~--~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (518)
... .+.+..+. ..+ .+..++++....+.++++ .++......+.....++.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 273 (485)
T TIGR00711 201 GSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYR-------NFTIGCVYMSLLGLGLYG 273 (485)
T ss_pred HHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCC-------ChHHHHHHHHHHHHHHHH
Confidence 000 00000000 000 000001111111122221 122233344444556666
Q ss_pred HHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhc
Q 010112 315 QNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIP 393 (518)
Q Consensus 315 ~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 393 (518)
...+.|.++++ .|+++.+. ........++.+++.++.+++.||++||+.+..+..+.+++..++...
T Consensus 274 ~~~~~p~~~~~~~g~s~~~~------------g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~ 341 (485)
T TIGR00711 274 SFYLLPLYLQQVLGYTALQA------------GLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFT 341 (485)
T ss_pred HHHHHHHHHHHhcCCCHHHH------------HHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhcc
Confidence 67778888876 56655442 235666777888899999999999999999988888777777665522
Q ss_pred cccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 394 YHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
.. ...+.........+.+.+.+. ..+.......+..|+++++++.|+.+....+|+.+++.+.+.+.+
T Consensus 342 ~~---~~~~~~~~~~~~~l~g~g~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~ 409 (485)
T TIGR00711 342 FT---PDTPFLAIALPQFIRGFGMGC-FFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILT 409 (485)
T ss_pred CC---CCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 111222222222222222222 222233455677799999999999999999999999999999885
No 50
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2e-30 Score=250.61 Aligned_cols=349 Identities=12% Similarity=0.016 Sum_probs=249.7
Q ss_pred HHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHH
Q 010112 29 GMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILM 108 (518)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~ 108 (518)
..+.++..+......+.+|.+..++ +.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~ 74 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAG----------TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIR 74 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh----------hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHH
Confidence 3455666667777788888888888 899999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhcc-----CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 010112 109 VISSIASGLSF-----GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVA 183 (518)
Q Consensus 109 ~i~~~~~~~~~-----~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~ 183 (518)
+++.++..+.. + ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.++
T Consensus 75 ~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~ 148 (365)
T TIGR00900 75 AVLVAVLPFVALLGGLN------IWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIG 148 (365)
T ss_pred HHHHHHHHHHHHcCCCc------HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 99888888776 6 799999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcC--CCCcchhhhhhccHHHHHHHHHHHH
Q 010112 184 LIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRM--PETARYTALVAKNAKQAAADMSKVL 261 (518)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~--~esp~~~~~~~~~~~~~~~~~~~~~ 261 (518)
+.+.+..+ ||+.|++.++..++..+....+ ||+++. .+++.+++..++.
T Consensus 149 ~~l~~~~g-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~---- 199 (365)
T TIGR00900 149 GLMYATLG-----------------------IKWAIWVDAVGFAISALLIVSVRIPELAAS--EIQALSNAVLRDT---- 199 (365)
T ss_pred HHHHHHhh-----------------------HHHHHHHHHHHHHHHHHHHHhcccccCCCc--cccccchhHHHHH----
Confidence 99875544 9999998777666554443333 333221 0000000000000
Q ss_pred hhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHH-hhHHHHHHH-hcCCCCCcchhhhH
Q 010112 262 QVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQN-LFQKDIFSA-IGWIPPAATMNAIH 339 (518)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~g~~~~~~~~~~~~ 339 (518)
. +..+..++++. ++......+.....+.... .+.|.+.++ .++++.+.
T Consensus 200 -----------~------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 249 (365)
T TIGR00900 200 -----------R------EGIKFVLKNPL-------LRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHY------ 249 (365)
T ss_pred -----------H------hHHHHHHcCcH-------HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHH------
Confidence 0 00111111211 1222222223333333333 566777665 45554432
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhc
Q 010112 340 EVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANF 419 (518)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (518)
........++.+++.++.+++.||.+||+.+..+..+.+++...+..... +.+...+...+. ++...
T Consensus 250 ------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-g~~~~ 316 (365)
T TIGR00900 250 ------GWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPP------NFPLFLVLWFAI-GVGYG 316 (365)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhch------hHHHHHHHHHHH-HHHHH
Confidence 22555566777888889999999999999988877666666655544331 122222333333 33333
Q ss_pred CccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 420 GPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 420 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
...+...++..|.+|++.|+++.|+.+...+++..++|.+.|.+.|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~ 362 (365)
T TIGR00900 317 PINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLAD 362 (365)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456677888999999999999999999999999999999999985
No 51
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.98 E-value=7.5e-30 Score=250.37 Aligned_cols=373 Identities=13% Similarity=0.097 Sum_probs=256.5
Q ss_pred HHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchh-----hHHHHHHHHHHHHhhhhhhhhhhhhcchhhHH
Q 010112 27 IAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNV-----SAAVNGVALCGTLAGQLFFGWLGDKLGRKKVY 101 (518)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~-----~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~ 101 (518)
..+++.++..+......+.+|.+.+++ |.+..+ .|++.+++.++..+++++.|+++||+|||+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~~~~----------g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 87 (408)
T PRK09874 18 VAWLGCFLTGAAFSLVMPFLPLYVEQL----------GVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIML 87 (408)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHh----------CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHH
Confidence 445566667777778888999998888 777554 48999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 010112 102 GITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (518)
Q Consensus 102 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~ 181 (518)
..+.++.+++.+++.+.++ ++.+++.|++.|++.+ ..+....++.|++|+++|+++.++...+..+|..+++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 160 (408)
T PRK09874 88 LRSALGMGIVMVLMGLAQN------IWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPL 160 (408)
T ss_pred HHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999888887 7999999999999765 46778889999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHH
Q 010112 182 VALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKV 260 (518)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~ 260 (518)
+++.+.+.. +||+.|++.++..++..+. .+++||+++. .++++..+. ++
T Consensus 161 ~~~~l~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~---- 210 (408)
T PRK09874 161 AGGLLADSY-----------------------GLRPVFFITASVLFLCFLVTLFCIRENFQP--VSKKEMLHM-RE---- 210 (408)
T ss_pred HHHHHHHHh-----------------------CHHHHHHHHHHHHHHHHHHHHHHhccCccc--ccchhhhHH-HH----
Confidence 999887544 3999999988776665443 4456665432 110000000 00
Q ss_pred HhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHH
Q 010112 261 LQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHE 340 (518)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 340 (518)
..+.++++.. ........+...........+.+.+..+.+.+....
T Consensus 211 ---------------------~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 256 (408)
T PRK09874 211 ---------------------VVTSLKNPKL------VLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNI------- 256 (408)
T ss_pred ---------------------HHHhCcCCch------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH-------
Confidence 0001111111 111111111111222223334455555432221110
Q ss_pred HHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcC
Q 010112 341 VYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFG 420 (518)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 420 (518)
............++.+++.+..+++.||++||+.+..+..+..++.+...... +.+... +..+..+.+...
T Consensus 257 -~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~g~~~~~ 327 (408)
T PRK09874 257 -AFISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQ-------TPLQLG-ILRFLLGAADGA 327 (408)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhc-------cHHHHH-HHHHHHHhhhHh
Confidence 00122233444566667788889999999999998888777666665544332 122222 222222223333
Q ss_pred ccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 421 PNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 421 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
..+...+...+..|++++++.+++.+....+|..++|.+.|.+. +..||+..|.+.+++.+++.+..
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~-------------~~~g~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 328 LLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAIS-------------ANYGFRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred hHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHH-------------hhcchhHHHHHHHHHHHHHHHHH
Confidence 34555566677888999999999999999999999999999998 45688999999999888887776
Q ss_pred hh
Q 010112 501 LC 502 (518)
Q Consensus 501 ~~ 502 (518)
++
T Consensus 395 ~~ 396 (408)
T PRK09874 395 WN 396 (408)
T ss_pred HH
Confidence 64
No 52
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.98 E-value=7.9e-30 Score=245.09 Aligned_cols=346 Identities=20% Similarity=0.299 Sum_probs=279.3
Q ss_pred HHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHH
Q 010112 27 IAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLI 106 (518)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~ 106 (518)
.+.+..+....+....++..|.+.+++ +.+..+.+++.+...++..+++++.|+++||+|||+.+..+.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~ 72 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAEDL----------GLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLL 72 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHH
Confidence 344566777888888899999999888 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 107 LMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 107 l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
+..++.++..+.++ ++.+++.|++.|++.+...+...+++.|++|+++|++.+++......+|..+++.+++.+
T Consensus 73 ~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 146 (352)
T cd06174 73 LFALGSLLLAFASS------LWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLL 146 (352)
T ss_pred HHHHHHHHHHHhcc------HHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 799999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcc
Q 010112 187 SSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELE 266 (518)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (518)
.+..+ ||+.+++.++..++..+...+++
T Consensus 147 ~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~----------------------------- 174 (352)
T cd06174 147 AESLG-----------------------WRWLFLILAILGLLLALLLLFLL----------------------------- 174 (352)
T ss_pred HHHhh-----------------------HHHHHHHHHHHHHHHHHHHHHHH-----------------------------
Confidence 75444 99999998877776655443332
Q ss_pred hhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHh-cCCCCCcchhhhHHHHHHH
Q 010112 267 AEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAI-GWIPPAATMNAIHEVYKIA 345 (518)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 345 (518)
+..+......+...........+.|.+.++. +.++.+ .
T Consensus 175 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 213 (352)
T cd06174 175 -----------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE------------A 213 (352)
T ss_pred -----------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH------------H
Confidence 0122233334444455556666777777663 444333 2
Q ss_pred HHHHHHHHhhcccchhhhhhhhhhccChh-HHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccce
Q 010112 346 RAQTLIALCSTVPGYWFTVAFIDYMGRFA-IQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNAT 424 (518)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518)
........++.+++.++.+++.||++||+ .+..+..+..++.+.+.... +... ........+.......+.
T Consensus 214 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~-~~~~~~~~g~~~~~~~~~ 285 (352)
T cd06174 214 GLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAP-------SLAL-LLVALLLLGFGLGFAFPA 285 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhc-------cHHH-HHHHHHHHHHHHhccchh
Confidence 23666677788889999999999999999 88888888888877776544 2222 333333333444445677
Q ss_pred eeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 010112 425 TFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLC 502 (518)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (518)
...+..|..|+++|++.+|+.+...+++..++|.+.+.+. +..+|+..+.+.+++.+++.+..++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~-------------~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 286 LLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLL-------------DTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------cccCcchHHHHHHHHHHHHHHHhee
Confidence 8889999999999999999999999999999999999998 4568889999999998888776653
No 53
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.98 E-value=2.5e-30 Score=252.74 Aligned_cols=364 Identities=18% Similarity=0.232 Sum_probs=241.5
Q ss_pred HhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHH-----HHHHHHhhhhhhhhhhhhcchhhHHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGV-----ALCGTLAGQLFFGWLGDKLGRKKVYGITLI 106 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~-----~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~ 106 (518)
.+.+++|+..+++..+.+.++++. +.++++.+.+.+. ..++..+++++.|+++||+|||+++..+.+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~ 73 (394)
T TIGR00883 2 NAVEWFDFYLYGFAAVLVFHTFFP--------PSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLL 73 (394)
T ss_pred cchhHHHHHHHHHHHHHHHHHhcC--------CCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHH
Confidence 356788999999999998888732 3445555554443 334445789999999999999999999999
Q ss_pred HHHHHHHHhhhccCCchhhH--HHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 010112 107 LMVISSIASGLSFGKSAKGV--IATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVAL 184 (518)
Q Consensus 107 l~~i~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~ 184 (518)
+..++.+++++++++..... ...++++|+++|++.+...+....++.|++|+++|++..++.+.+..+|.++++.++.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~ 153 (394)
T TIGR00883 74 MMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVL 153 (394)
T ss_pred HHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988421110 1258899999999999999999999999999999999999999999999999999887
Q ss_pred HHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhh
Q 010112 185 IVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVE 264 (518)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~ 264 (518)
.+....+.. ....++||+.|++.+++.++..+.....||+|++...++++
T Consensus 154 ~~~~~~~~~---------------~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 203 (394)
T TIGR00883 154 LLSYLLGDD---------------ALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKH--------------- 203 (394)
T ss_pred HHHHhcCHH---------------HhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcc---------------
Confidence 775432210 01246799999987777666655555667765431000000
Q ss_pred cchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHH
Q 010112 265 LEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYK 343 (518)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 343 (518)
++...+.++.++++ .+.++......+.....++....+.|.+.+ +.++++.+.
T Consensus 204 -----------~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---------- 257 (394)
T TIGR00883 204 -----------KKKRGPIRETLTKH-----RKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSA---------- 257 (394)
T ss_pred -----------ccccCCHHHHHHhc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHH----------
Confidence 00000111112211 112333444444555566666777888874 456554432
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHH-HHHhhccccccCCCchhHHHHHHHHHHHHHhcCcc
Q 010112 344 IARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFM-FALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPN 422 (518)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (518)
........+..+++.++.+++.||+|||+.+.....+..+.. ..+..... ..+.........+.+... ....
T Consensus 258 --~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~g~~~-~~~~ 330 (394)
T TIGR00883 258 --LLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLD----SGSFTLFFFLVLGLALIG-GMYT 330 (394)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhc----CCchHHHHHHHHHHHHHH-HHHh
Confidence 224555666777888899999999999998775554443332 22211110 012222222222222222 2234
Q ss_pred ceeeeccccccchhhhhhHHHHHH-HHHHHHHHHHHhhhHhhhhc
Q 010112 423 ATTFVVPAEIFPARLRSTCHGISA-AAGKAGAIVGAFGFLYAAQS 466 (518)
Q Consensus 423 ~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~ 466 (518)
+...++..|.+|++.|+++.++.. ....+|..++|.+.|.+.+.
T Consensus 331 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~ 375 (394)
T TIGR00883 331 GPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAM 375 (394)
T ss_pred hhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHH
Confidence 566788899999999999999854 44568888999999999853
No 54
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.98 E-value=1.2e-29 Score=246.97 Aligned_cols=348 Identities=16% Similarity=0.170 Sum_probs=242.8
Q ss_pred HHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHH
Q 010112 27 IAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLI 106 (518)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~ 106 (518)
.+....+....+...+.+..|.+.+++ +.++++.+++.+.+.++..+++++.|+++||+|||+++..+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~ 78 (385)
T TIGR00710 9 LLGCLSILGPLGIDMYLPAFPEIAADL----------STPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLF 78 (385)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHH
Confidence 333334556677778888899999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 107 LMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 107 l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
+.+++.+++.++++ ++.+++.|++.|++.+...+...+++.|++|+++|+++.++.+....+|..+++.+++.+
T Consensus 79 ~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l 152 (385)
T TIGR00710 79 IFALSSLGLALSNN------IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYI 152 (385)
T ss_pred HHHHHHHHHHHHcc------HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999988 799999999999999999999999999999999999999999999999999999999988
Q ss_pred HhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhc
Q 010112 187 SSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVEL 265 (518)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (518)
.+.. +||+.|++.++..++..+. .++.||+++.. ++++.++..+
T Consensus 153 ~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---------- 197 (385)
T TIGR00710 153 LVWL-----------------------SWHAIFAFLSLAGILLSALIFFILPETLPYE--ARIQISTYFE---------- 197 (385)
T ss_pred HHHc-----------------------CHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc--ccCCHHHHHH----------
Confidence 7544 4999999877776665444 44567765431 1110000000
Q ss_pred chhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHHH
Q 010112 266 EAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYKI 344 (518)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~ 344 (518)
..++.++++. .+...+........++....+.|.+++ +.++++.+.
T Consensus 198 ---------------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~----------- 244 (385)
T TIGR00710 198 ---------------TFLLLLKSKM-------FWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVF----------- 244 (385)
T ss_pred ---------------HHHHHHcCch-------hHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHH-----------
Confidence 0011111111 111222222233344444555666655 456554432
Q ss_pred HHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccce
Q 010112 345 ARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNAT 424 (518)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518)
........++.+++.++.+++.||+++|+.+..+..+..++.+++..... . ...............+.+.....+.
T Consensus 245 -g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~g~~~~~~~~~ 320 (385)
T TIGR00710 245 -GLLFALNIIAMIFGGFLNGRFIKKWGAKSLLRMGLILFAVSAVLLEITAI-L--GLGSWAMIIGPMMFVGIGNSMISSI 320 (385)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-h--ccchHHHHHHHHHHHHHHHHHHHHH
Confidence 22555566778889999999999999999888887776666655543321 0 0011222222222222222223445
Q ss_pred eeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhh
Q 010112 425 TFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYA 463 (518)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 463 (518)
......|..| +.++++.++.+...+.++.+.+.+.+.+
T Consensus 321 ~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~~~~~ 358 (385)
T TIGR00710 321 AMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYLVSLI 358 (385)
T ss_pred HHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5566677766 5689999999988887666666666644
No 55
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.97 E-value=3.2e-29 Score=244.30 Aligned_cols=360 Identities=11% Similarity=0.012 Sum_probs=236.6
Q ss_pred HHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhh---hc-c
Q 010112 44 LVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASG---LS-F 119 (518)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~---~~-~ 119 (518)
+..+.+.+++ +.+..+.|++.+.+.+++.+++++.|+++||+||||++..+.++++++++++. +. +
T Consensus 34 ~~~~~~~~~~----------g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~ 103 (402)
T TIGR00897 34 GWLSPFLKAL----------GLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHA 103 (402)
T ss_pred HhHHHHHHHh----------CCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc
Confidence 3445555778 99999999999999999999999999999999999999999999998877653 32 3
Q ss_pred CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHH-HHHHHHHHHHHhhcccCCCCCC
Q 010112 120 GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGI-LAGGIVALIVSSAFDHHFKAPP 198 (518)
Q Consensus 120 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~-~lg~~l~~~l~~~~~~~~~~~~ 198 (518)
+ ++.+++.|+++|++.+...+.....+.|++|+++|++++|+.+.+.++|. .+++.+++.+.+.
T Consensus 104 ~------~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~--------- 168 (402)
T TIGR00897 104 N------YPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA--------- 168 (402)
T ss_pred c------HHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---------
Confidence 4 68888999999999888888888889999999999999999999999997 5789888877633
Q ss_pred CCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHH-HHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhh
Q 010112 199 YSVDPVGSTAPEADYVWRIVLMVGALPAALTYY-WRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQ 277 (518)
Q Consensus 199 ~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (518)
.+|+..++......++..+ ..++.+|.++. .++++ ++..+ +..+
T Consensus 169 --------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~---------------~~~~--- 213 (402)
T TIGR00897 169 --------------FGEMNTLWSALAFVLTGGVIALFSNKDIFTP--QHMQT-REKFS---------------ELGK--- 213 (402)
T ss_pred --------------cchHHHHHHHHHHHHHHHHHHHhccCCCCCc--ccccC-Ccchh---------------hHHH---
Confidence 3355554443332222222 23334443221 00000 00000 0000
Q ss_pred ccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcc
Q 010112 278 RDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTV 357 (518)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (518)
..+..++++ .++......++....+++...+.|.+.++.|+++.+.+ .......++.+
T Consensus 214 ---~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~------------~~~~~~~~~~~ 271 (402)
T TIGR00897 214 ---AATILFTNP-------NVLLGGMVRIINTIGLFGFAVFLPMFVAELGFSTSEWL------------QIWGTFFFTNI 271 (402)
T ss_pred ---HHHHHHcCh-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHH------------HHHHHHHHHHH
Confidence 001111221 22333344445556667778889999888777665422 24445567788
Q ss_pred cchhhhhhhhhhccChhHHHH-HHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh
Q 010112 358 PGYWFTVAFIDYMGRFAIQMM-GFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR 436 (518)
Q Consensus 358 ~~~~~~g~l~dr~g~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 436 (518)
++.+..|+++||++||+.+.. +.....++.+.+....... .++.........+.+ .......+. .....|. +++
T Consensus 272 ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~G-~~~~~~~~~-~~~~~~~-~~~ 346 (402)
T TIGR00897 272 VFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHF--GHSFAVALIIAIALG-IFLAGYVPL-AAVFPTL-APK 346 (402)
T ss_pred HHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHcc--CCcHHHHHHHHHHHH-HHHHHHHHH-HHHHHhh-Ccc
Confidence 899999999999999887642 2233333222222111000 011222222222222 222222333 3445666 456
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhc
Q 010112 437 LRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCV 503 (518)
Q Consensus 437 ~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (518)
+|+++.|+.+...++++.++|.+.|.+.+ ..|+...+++.+++.+++.+...++
T Consensus 347 ~~g~~~g~~~~~~~lg~~~gp~i~g~l~~-------------~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 347 HKGAAMSVLNLSAGLSAFLAPAIAVLFIG-------------FFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------hcchHHHHHHHHHHHHHHHHHHHHh
Confidence 89999999999999999999999999984 5578889999988888877776654
No 56
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.97 E-value=2.9e-29 Score=243.36 Aligned_cols=365 Identities=14% Similarity=0.084 Sum_probs=246.9
Q ss_pred HHHhhhhhhhHHHHHHHhh-hhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHH-HHHHH
Q 010112 30 MGFFTDAYDLFCISLVTKL-LGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYG-ITLIL 107 (518)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~-~~~~l 107 (518)
+.++..++......+.+|. +++++ |.|..+.|++.+.+.++..+.+++.|+++||+||||.++ .+..+
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~ 73 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEV----------RARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLL 73 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHccc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHH
Confidence 3456666777777787776 56788 999999999999999999999999999999999988755 45666
Q ss_pred HHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhH--HHHHHHHHHHHHHHHHHHHHH
Q 010112 108 MVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF--IAAVFAMQGFGILAGGIVALI 185 (518)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~--~~~~~~~~~lG~~lg~~l~~~ 185 (518)
.+++.++++++++ ++.+++.|+++|.+.+...|...+++.|+.|+++|++. .+....+.++|.++++.+++.
T Consensus 74 ~~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~ 147 (375)
T TIGR00899 74 AALACLLFAWNRN------YFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFW 147 (375)
T ss_pred HHHHHHHHHhcch------HHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHH
Confidence 6777888888888 78888999999988888888888999999988777754 578888889999999999999
Q ss_pred HHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhh
Q 010112 186 VSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVE 264 (518)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~ 264 (518)
+.+. .+||+.|++.+++.++..+. .+++||+|++. ++++. .
T Consensus 148 l~~~-----------------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~---------- 189 (375)
T TIGR00899 148 LALG-----------------------FGFTVMFLTAALAFVLCGVLVWLFLPSYPRGA--PGALT---R---------- 189 (375)
T ss_pred HHHh-----------------------cccHHHHHHHHHHHHHHHHHHHHhCCCcccCc--ccccC---c----------
Confidence 8744 34999999988876665544 45578876531 10000 0
Q ss_pred cchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHH
Q 010112 265 LEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYK 343 (518)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~ 343 (518)
. +.++.++++.. +...... +...........+.|.++. +.|.++.+.
T Consensus 190 -----~----------~~~~~~~~~~~----~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~---------- 237 (375)
T TIGR00899 190 -----L----------EVRGLLASRDT----RLLFVAC---TLMWGCNILYIINMPLLIIHELGLPDKLA---------- 237 (375)
T ss_pred -----c----------hhhhhhcCcch----HHHHHHH---HHHHHHHHHHHhhhHHHHHHHcCCCHHHH----------
Confidence 0 00001111111 1111111 1111122223344555553 456554432
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccc
Q 010112 344 IARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNA 423 (518)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518)
+. .........+++.++++++.||++||+.+..+.....+....+.... +.+.......+.+...+. ..+
T Consensus 238 -g~-~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~g~-~~~ 307 (375)
T TIGR00899 238 -GL-MMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADN-------SLWALLMLQLLNAIFIGI-LAG 307 (375)
T ss_pred -HH-HHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH-HHH
Confidence 11 23333344556778899999999999988877665554444333222 122222222222222222 234
Q ss_pred eeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhc
Q 010112 424 TTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCV 503 (518)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (518)
....+..|..|++ +++++++.+...++|..++|.+.|.+.+ ..||+..|.+.+++.+++.+...++
T Consensus 308 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~-------------~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 308 IGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAE-------------RWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hccchhHHHHHHHHHHHHHHHHhee
Confidence 5556778887764 6799999999999999999999999984 5578889999888888888776655
Q ss_pred c
Q 010112 504 P 504 (518)
Q Consensus 504 ~ 504 (518)
+
T Consensus 374 ~ 374 (375)
T TIGR00899 374 K 374 (375)
T ss_pred c
Confidence 4
No 57
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.8e-31 Score=244.42 Aligned_cols=373 Identities=15% Similarity=0.156 Sum_probs=249.5
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcch
Q 010112 18 QLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGR 97 (518)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Gr 97 (518)
.+..++.+.++++..+++..|++.+..+.+.+++.| |+++++.|++.+.+.+.+.+++|+.|+++||+.|
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~~f----------ni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR 97 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQTYF----------NISDSELGLLQTVFIVVFMIASPLFGYLADRYNR 97 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHHhc----------CCCchhccchhHHHHHHHHHHHHHHHHHHhhcCc
Confidence 344566778888999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHH
Q 010112 98 KKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (518)
Q Consensus 98 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~ 177 (518)
|+++.+|..+|.++.+.++++.. ||++.++|.+.|+|++...|+++++++|.+|.++|++++++++...++|..
T Consensus 98 ~~v~~vG~~iW~~Av~~~~fs~~------Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsg 171 (493)
T KOG1330|consen 98 KRVIAVGIFIWTLAVFASGFSNH------FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSG 171 (493)
T ss_pred ceEEeeHHHHHHHHHHHHHHHHH------HHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccc
Confidence 99999999999999999999976 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH-hcCCCCcchhhhhhccHHHHHHH
Q 010112 178 AGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR-MRMPETARYTALVAKNAKQAAAD 256 (518)
Q Consensus 178 lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~ 256 (518)
+|.+.+..+.+..+. ||+.|++.++++++..++. ++.+|+++. ..++..+
T Consensus 172 lG~vvgs~va~~~~~----------------------Wr~af~~~avl~vi~~~L~~~f~~eP~rg------a~~~~~~- 222 (493)
T KOG1330|consen 172 LGYVVGSVVASLTFW----------------------WRWAFRGSAVLGVIVGLLVFLFVREPERG------ARDEVDG- 222 (493)
T ss_pred eeEEeeeeeccCccc----------------------eEEEEEeehHHHHHHHHHHHhhccCcccc------ccccccc-
Confidence 999999888754442 9999999999998876664 556665432 0000000
Q ss_pred HHHHHhhhcchhhhHhhhhhhccCCcccchhhhhh-hhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcch
Q 010112 257 MSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFL-KRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATM 335 (518)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 335 (518)
+.+......+.++.++.... +......+......+..+..-+....+.+....-.+.+..
T Consensus 223 ---------------~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~---- 283 (493)
T KOG1330|consen 223 ---------------ENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHN---- 283 (493)
T ss_pred ---------------CCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccc----
Confidence 00000111112221111111 1111122333333333222112222222222222332222
Q ss_pred hhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhcc----ChhHHHHHHH-------HHHHHHHHHhhccccccCCCchh
Q 010112 336 NAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMG----RFAIQMMGFF-------FMTVFMFALAIPYHHWTLKPNRI 404 (518)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g----~r~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ 404 (518)
.+.++..+...++.+|.+.+|.++||+. |-......-+ +.+..+.+..... ..+.+
T Consensus 284 --------~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~-----~~s~~ 350 (493)
T KOG1330|consen 284 --------ATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFT-----SSSMI 350 (493)
T ss_pred --------cchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhh-----hHHHH
Confidence 3444667777778888888888888843 2111111111 1112222221111 11222
Q ss_pred HHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHH-HHHHHHHhhhHhhhhcCC
Q 010112 405 GFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGK-AGAIVGAFGFLYAAQSKD 468 (518)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~ 468 (518)
..++++.+........+ ....-+..|++|++.|.++.++-..+.. +|.+-+|.+.|.+.|...
T Consensus 351 ~~~il~~~g~~~~~~~~-a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~ 414 (493)
T KOG1330|consen 351 FGLILFLVGETISWFNW-ATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLR 414 (493)
T ss_pred HHHHHHHHHHHHHhccc-ccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhh
Confidence 22233333222333333 3334566788999999999999888776 566666669999987553
No 58
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=2.8e-29 Score=253.16 Aligned_cols=376 Identities=22% Similarity=0.299 Sum_probs=271.0
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.+.....+..+++++|..+|++++|+++||+|||++++.++++..++.+..+++++ ++.+++.|++.|++.++
T Consensus 114 c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~------~~~~~~~Rfl~G~~~~~ 187 (521)
T KOG0255|consen 114 CDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPN------YWMFLIFRFLSGFFGSG 187 (521)
T ss_pred eCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCc------HHHHHHHHHHHHhhccc
Confidence 567778899999999999999999999999999999999999999999999999999 89999999999999999
Q ss_pred ccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGA 223 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (518)
...+...++.|++++++|+.+..+ ......+..+++.+++++.. +||+.+++..
T Consensus 188 ~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~-------------------------~Wr~~~~~~~ 241 (521)
T KOG0255|consen 188 PLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR-------------------------DWRWLFWIIS 241 (521)
T ss_pred hhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh-------------------------hHHHHHHHHH
Confidence 999999999999999999999999 66677777788888877763 3999999999
Q ss_pred HHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhh---cchh--hhHh--hhhhh-----ccCCcccchhhhhh
Q 010112 224 LPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVE---LEAE--EDKV--AKLSQ-----RDSNSFGLFSREFL 291 (518)
Q Consensus 224 ~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~--~~~~~-----~~~~~~~~~~~~~~ 291 (518)
++.++.++.+++.||+|+|+ ..+++.+++.+.+++..+.+ .+.+ .+.. .+... .+....++++.+..
T Consensus 242 ~~~~~~~~~~~l~~Es~rwl-~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 320 (521)
T KOG0255|consen 242 IPSGLFLLLWFLPPESPRWL-LSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRL 320 (521)
T ss_pred HHHHHHHHHHHccCcChHHH-HHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHH
Confidence 99888777777777999997 44455566666666654332 1111 1110 01000 11233455555543
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhcc
Q 010112 292 KRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMG 371 (518)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 371 (518)
++ ..+...+.++.....+++.......+ |-+ .. ...........+.....+...|++|
T Consensus 321 ~~---~~~~~~~~~~~~~~~y~gl~~~~~~l----g~~-------~~--------~~~~~~~~~~~p~~~~~~~~~~~~g 378 (521)
T KOG0255|consen 321 RY---RTLYLLFIWFVFSLVYYGLSLNVSGL----GGN-------IY--------LNFTLSGLVELPAYFRNGLLLPEFG 378 (521)
T ss_pred HH---HHHHHHHHHHHHhHHHHhhhhhhhhc----Cch-------HH--------HHHHHHHHHHhhHHHHHHHHHHHhC
Confidence 33 44555566666666666654433221 111 11 1222233366667777789999999
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHH
Q 010112 372 RFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKA 451 (518)
Q Consensus 372 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 451 (518)
||.....+..+.+++.+..++..... ......++..+..++.+.+... .+.+..|++|+..|..+.+..+....+
T Consensus 379 R~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~el~pt~~r~~~~~~~~~~~~~ 453 (521)
T KOG0255|consen 379 RRPPLFLSLFLAGIGLLLFGWLPDDL----GGWLHWILPLLGKFFIGSAFNL-IFLYSAELIPTVVRNTAVGAISAAARL 453 (521)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhhccc----hhHHHHHHHHHHHHHHHHHHHH-HHHHHHhhccHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888766311 1112333333333444444443 478999999999999999999999999
Q ss_pred HHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH-hhcccCCCCChhh
Q 010112 452 GAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT-LCVPESKGRSLEE 513 (518)
Q Consensus 452 g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 513 (518)
+.+++|.+...... ......+.+++.+..+..++. .++||++++.+.+
T Consensus 454 ~~i~ap~~~~~~~~--------------~~~~~~~~~~~~~~~l~~~~~~~~lpet~~~~l~~ 502 (521)
T KOG0255|consen 454 GSILAPLFPLLLRQ--------------MFPLLGLILFGWLALLLGLLSLLLLPETKGKPLPG 502 (521)
T ss_pred HHHHHHHHHHHHhh--------------hcccchHHHHHHHHHHHHHHHHhcCcccCCCCCch
Confidence 99999999866642 111223333555666665555 5899999887653
No 59
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.97 E-value=8e-29 Score=240.12 Aligned_cols=367 Identities=12% Similarity=0.045 Sum_probs=239.3
Q ss_pred HHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHH
Q 010112 29 GMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILM 108 (518)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~ 108 (518)
+++.++..++........+.+.+++ +.+..+.+++.+.+.+++.+.+++.|+++||+|||++++.+.++.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~ 78 (393)
T PRK11195 9 MAAQFFSALADNALLFAAIALLKEL----------HYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIK 78 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc----------CCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHH
Confidence 4455555554444555555667788 889999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010112 109 VISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSS 188 (518)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~ 188 (518)
+++++++.++.+ . ++.|+++|++.+...|...+++.|++|+++|+++.++.+....+|.++||.+++.+.+
T Consensus 79 ~~~~~~~~~~~~------~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~ 149 (393)
T PRK11195 79 LLGCLLMLFGIH------P---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD 149 (393)
T ss_pred HHHHHHHHHHHH------H---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988877655 3 6789999999999999999999999999999999999999999999999999999974
Q ss_pred hcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchh
Q 010112 189 AFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAE 268 (518)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (518)
. .|+..+.+.+...++..+..+.+||+|++. ++++.++ .+...+.
T Consensus 150 ~------------------------~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~-~~~~~~~-------- 194 (393)
T PRK11195 150 P------------------------HAEAALAVCALIYLLAALFNLFIPRLGARR--PGQSWNP-IALLRDF-------- 194 (393)
T ss_pred H------------------------HHHHHHHHHHHHHHHHHHHHhcCCCCcccc--cccCCCH-HHHHHHH--------
Confidence 1 277777666555554555556788876431 1111000 0000000
Q ss_pred hhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHH
Q 010112 269 EDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARA 347 (518)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 347 (518)
. + ..+..++++..+. ..+...+.+. .........+.+.++ .|.++.+. ..
T Consensus 195 ----~---~---~~~~l~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~lg~s~~~~------------G~ 245 (393)
T PRK11195 195 ----F---H---ACRVLWRDKLGRF---SLAGTTLFWG----AGATLRFLVLAWAPVALGITLNQP------------AY 245 (393)
T ss_pred ----H---H---HHHHHHhCchhHH---HHHHHHHHHH----HHHHHHHHHHHHHHHHcCCChhHH------------HH
Confidence 0 0 0011122222211 1111111111 122222333344433 45555432 22
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
......++.+++.+..+++.||.++|+.+..+.. .++....+.... +.+.......+.+.+... ..+...+
T Consensus 246 ~~~~~~~g~i~g~~~~~~l~~~~~~~~~~~~g~~-~~~~~~~~~~~~-------~~~~~~~~~~~~G~~~g~-~~~~~~~ 316 (393)
T PRK11195 246 LQAVVAIGIAVGAGAAARLVTLETVLRVLPAGIL-MGLVVLLMALQH-------SLLPAYPLLILIGALGGF-FVVPMNA 316 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHH-HHHHHHHHHHHh-------HHHHHHHHHHHHHHhhhh-hhhhHHH
Confidence 6667777888899999999999998887776643 333333332222 122222222233333222 2333455
Q ss_pred ccccccchhh-hhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 428 VPAEIFPARL-RSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 428 ~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
...+..|++. +|++.++.+...+++..++..+.+.+. ..|.+..+.+.+...+++..+.+
T Consensus 317 ~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK11195 317 LLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLLV--------------KLGVPVVAVIVGFGLLVALAMAL 377 (393)
T ss_pred HHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHHH--------------HcCCCHHHHHHHHHHHHHHHHHH
Confidence 6667655554 799999999999999999999998764 34556666665555555555544
No 60
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.97 E-value=5.8e-30 Score=246.12 Aligned_cols=347 Identities=20% Similarity=0.271 Sum_probs=245.8
Q ss_pred HHHHhhhhhhhHHHHHHHh-hhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHH
Q 010112 29 GMGFFTDAYDLFCISLVTK-LLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLIL 107 (518)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l 107 (518)
+++.++..++.....+..| .+.+++ |.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~ 71 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEEL----------GLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLL 71 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCS----------TTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhh
Confidence 4566777888888899999 888999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 108 MVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
.+++.++..++++ ++.++++|++.|++.+...+...+++.|++|+++|++++++......+|.++++.+++.+.
T Consensus 72 ~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 145 (352)
T PF07690_consen 72 FALGSLLLAFASN------FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI 145 (352)
T ss_dssp HHHHHHHHHHHCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhHHHHhhhhhh------HHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh
Confidence 9999777777666 5799999999999999999999999999999999999999999999999999999999886
Q ss_pred hhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcc
Q 010112 188 SAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELE 266 (518)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (518)
+. .+||+.|++.+++.++..++ ..+++++|+....+++++++
T Consensus 146 ~~-----------------------~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------- 188 (352)
T PF07690_consen 146 SY-----------------------FGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------- 188 (352)
T ss_dssp CH-----------------------CHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------------
T ss_pred hc-----------------------cccccccccccchhhhhhhhHhhhhhhcccccccccccccc--------------
Confidence 43 34999999998888877654 34555554431111111000
Q ss_pred hhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHH-HHHhcCC-CCCcchhhhHHHHHH
Q 010112 267 AEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDI-FSAIGWI-PPAATMNAIHEVYKI 344 (518)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~-~~~~~~~~~~~~~~~ 344 (518)
++.++ +..+.++....++. ++......+.....+.....+.|.+ .+..+++ .. .
T Consensus 189 ------~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~------------~ 244 (352)
T PF07690_consen 189 ------SKKPK---PLKPGFKSLFKNPV---LWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPS------------Q 244 (352)
T ss_dssp --------HHH---CCCH-CTHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHH------------H
T ss_pred ------ccccc---ccccccccccccch---hhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHH------------H
Confidence 00000 00001111111111 1122223333334555566777776 4445665 12 2
Q ss_pred HHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccce
Q 010112 345 ARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNAT 424 (518)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518)
.........+..+++.++.+++.||+++|+..........+..+.+...... .+.........+.+. ......+.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~g~-~~~~~~~~ 319 (352)
T PF07690_consen 245 AGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFS----SSPVWLIIALFLIGF-GFGIVFPI 319 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHH----CHHHHHHHHHHHHHH-HHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHH-HHHHHHHH
Confidence 2224555666667778899999999999888777776666666665544321 112222223333333 33334677
Q ss_pred eeeccccccchhhhhhHHHHHHHHHHHHHHHHH
Q 010112 425 TFVVPAEIFPARLRSTCHGISAAAGKAGAIVGA 457 (518)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 457 (518)
...+..|.+|++++|++.|+.+...+++..++|
T Consensus 320 ~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 320 LFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 888999999999999999999999999999987
No 61
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.97 E-value=7.1e-30 Score=246.77 Aligned_cols=307 Identities=16% Similarity=0.178 Sum_probs=225.0
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhh
Q 010112 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKK 99 (518)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~ 99 (518)
..+.++..++..++....++..++... + .++++|.++...+.+.+.++++++++++++++|.+.||++-.+
T Consensus 42 ~dl~i~~~~~~~y~~~~~d~~si~~a~--l-------~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~ 112 (495)
T KOG2533|consen 42 LDLFILPFLCYLYFHAYLDKSSIVNAS--L-------SGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSK 112 (495)
T ss_pred HHHHHHHHHHHHHHHHhcchhcchhHH--H-------cCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHH
Confidence 344455556666677777776555432 1 2234445999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHH
Q 010112 100 VYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (518)
Q Consensus 100 ~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg 179 (518)
.+....+++++..++.....+ ++.+++.|++.|+.++..+|....+++.|+.++||++.++++.+..++|.++|
T Consensus 113 ~l~~~~~~w~~~~~~~~~~~s------~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~g 186 (495)
T KOG2533|consen 113 GLSVSGILWGLFGFLTAAVHS------FPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFG 186 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHhh------hHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHH
Confidence 999999999999988888888 79999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHH
Q 010112 180 GIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMS 258 (518)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (518)
++++..+.+..+. ....||||.|++.+++.++..++ .+++|+.|... .-.+++| ++...
T Consensus 187 gliA~g~~~~~~~-----------------~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~--~fl~~~e-k~~~~ 246 (495)
T KOG2533|consen 187 GLIAYGVFKLNGS-----------------GGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKA--WFLTDEE-KELVV 246 (495)
T ss_pred HHHHHHhhhhcCC-----------------CCcCCceeehhHHHHHHHHHHheEEEEecCChhhc--cccchHH-HHHHH
Confidence 9999997653332 34678999999999888876554 57799999731 1111111 11111
Q ss_pred HHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhh
Q 010112 259 KVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNA 337 (518)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 337 (518)
+..+.+.....++ +.+..+.++.+++ +.+|...+.+++.....++...|+|.++++ .+++..+.+.
T Consensus 247 ~~~~~~~~~~~~~----~~~~~~~~~a~~d-------p~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~-- 313 (495)
T KOG2533|consen 247 ERLRESPSGGIEN----KFKWKGFKEALKD-------PGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANL-- 313 (495)
T ss_pred HHHHhccCCCccc----ccCHHHHHHHHhc-------hhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhcc--
Confidence 1111000000000 0111112222223 356778888888888889999999999998 4576665444
Q ss_pred hHHHHHHHHHHHHHHHhhcccchhhhhhhhhh----ccChhHHHHHHHHHH
Q 010112 338 IHEVYKIARAQTLIALCSTVPGYWFTVAFIDY----MGRFAIQMMGFFFMT 384 (518)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~r~~~~~~~~~~~ 384 (518)
+..+..++++++.+++|+++|| ..+|........+..
T Consensus 314 ----------ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~ 354 (495)
T KOG2533|consen 314 ----------LSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYA 354 (495)
T ss_pred ----------ccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 7888888999999999999999 455555554444433
No 62
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=1.3e-28 Score=240.66 Aligned_cols=342 Identities=13% Similarity=0.115 Sum_probs=237.7
Q ss_pred HhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVIS 111 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~ 111 (518)
.++..+....+.|..|.+.+++ +.++++.+++.+++.++..++++++|+++||+|||+++..+.++..++
T Consensus 15 ~~~~~~~~~~~~p~~~~i~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 84 (401)
T PRK11043 15 SMLGFLATDMYLPAFKAIQADL----------QTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALG 84 (401)
T ss_pred HHHHHHHHHHHHhhHHHHHHHH----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHH
Confidence 4444556677788888899999 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 112 SIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
.+++.++++ ++.+++.|+++|++.+...+...+++.|++|++++++..+.......+|..++|.+++.+.+.
T Consensus 85 ~~~~~~~~~------~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~-- 156 (401)
T PRK11043 85 SLGMLWVES------AAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNH-- 156 (401)
T ss_pred HHHHHHhcC------HHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 999999988 799999999999998888888889999999999999999999888999999999999988743
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhH
Q 010112 192 HHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDK 271 (518)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (518)
.+||+.|++.+++.++..+..++++|+++. . ++++..+
T Consensus 157 ---------------------~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~---------------- 194 (401)
T PRK11043 157 ---------------------FGWQAIFATLFAITLLLILPTLRLKPSKKA--R---KQSQDAL---------------- 194 (401)
T ss_pred ---------------------CChHHHHHHHHHHHHHHHHHHHHcCCCCCc--c---ccchHHH----------------
Confidence 349999999887777665555555654431 0 0000000
Q ss_pred hhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHH
Q 010112 272 VAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLI 351 (518)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (518)
+.++.++++.. +............++....+.|.++++.|+++.+.+ .....
T Consensus 195 ---------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g------------~~~~~ 246 (401)
T PRK11043 195 ---------TFKQLLKSKTY-------LGNVLIFAACSAAFFAWLTGSPFILEQMGYSPADIG------------LSYVP 246 (401)
T ss_pred ---------HHHHHHcChhH-------HHHHHHHHHHHHHHHHHHHHhHHHHHHcCCCHHHHH------------HHHHH
Confidence 01111122211 111112222233444455667777777676654322 13444
Q ss_pred HHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeecccc
Q 010112 352 ALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAE 431 (518)
Q Consensus 352 ~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518)
..++.+++.++.+++.||+++|+.........+++.+.+...... .............+.+. ......+.......|
T Consensus 247 ~~~~~~~g~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 323 (401)
T PRK11043 247 QTIAFLVGGYGCRAALQKWGGEQLLPWLLVLFAVSVIAIWLASLL--SHPSLVPLLIPFCVMAA-ANGAIYPIVVAQALR 323 (401)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHh--ccCcHHHHHHHHHHHHH-HHHHHHHHHHHHHhh
Confidence 556667788888999999999887665555544443332221100 01122222222222222 222234555555556
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 432 IFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 432 ~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
..| ++++++.|+.+.....++..++.+.|.+.+
T Consensus 324 ~~~-~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~ 356 (401)
T PRK11043 324 PFP-QATGKAAALQNTLQLGLCFLASLLVSALIS 356 (401)
T ss_pred hCc-ccChHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 655 579999999999999999999999998874
No 63
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=2e-28 Score=243.32 Aligned_cols=385 Identities=12% Similarity=0.056 Sum_probs=256.9
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc-----chhh
Q 010112 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL-----GRKK 99 (518)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~-----Grr~ 99 (518)
.....+..+..+......+..+|...++. +.+..++|.+ +.....+ ++.+++|+++||+ ||||
T Consensus 14 ~~~~~~l~~~~gl~~~~~~~~l~~~l~~~----------g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr 81 (491)
T PRK11010 14 SAILLILGFASGLPLALTSGTLQAWMTVE----------NIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRR 81 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCch
Confidence 34445556677777788888899888888 8999999997 4444444 6899999999999 9998
Q ss_pred H-HHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHH
Q 010112 100 V-YGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (518)
Q Consensus 100 ~-~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~l 178 (518)
. +..+.++.+++...+++.+.. ++++.+.+.|++.|++.+...+...+++.|++|+++|+++.++...+..+|.++
T Consensus 82 ~~ll~~~i~~~~~~~~~a~~~~~---~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~ll 158 (491)
T PRK11010 82 GWLLATQLLLLVAIAAMGFLEPG---TQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLV 158 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHH
Confidence 5 668888887887777776432 117889999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHH
Q 010112 179 GGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMS 258 (518)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~ 258 (518)
++.++.++.+. ..|||..|++.++..++..+..++.||+++.. ++++ +. .+..
T Consensus 159 g~~l~~~l~~~----------------------~~GWr~~f~i~a~l~ll~~l~~~~~~e~~~~~--~~~~-~~-~~~~- 211 (491)
T PRK11010 159 SGGLALWLADR----------------------YLGWQGMYWLMAALLIPCIIATLLAPEPTDTI--PVPK-TL-EQAV- 211 (491)
T ss_pred HHHHHHHHHhc----------------------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc--cccc-ch-hhhH-
Confidence 99999888731 23599999998887776665555678865321 0000 00 0000
Q ss_pred HHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHH-HHhcCCCCCcchhh
Q 010112 259 KVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIF-SAIGWIPPAATMNA 337 (518)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~ 337 (518)
..+..+.+++ +. .+......+...........+.+.++ ++.|+++.+
T Consensus 212 --------------------~~~l~~~~~~----~~---~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~----- 259 (491)
T PRK11010 212 --------------------VAPLRDFFGR----NN---AWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGE----- 259 (491)
T ss_pred --------------------HHHHHHHHcC----cC---HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH-----
Confidence 0001111111 11 11111112222223333333444454 446766554
Q ss_pred hHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHH
Q 010112 338 IHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFA 417 (518)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (518)
.+........++.+++.+++|++.||+++|+.+..+..+.++..+++..... . .++.........+.....
T Consensus 260 ------~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~-~--~~~~~~l~~~~~l~~~~~ 330 (491)
T PRK11010 260 ------VGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSI-T--DKNLYSMGAAVFFENLCG 330 (491)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-c--cccHHHHHHHHHHHHHHH
Confidence 2222234555678889999999999999988877666554444333221110 0 012222111222211111
Q ss_pred hcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHH
Q 010112 418 NFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGM 497 (518)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 497 (518)
+.+. +..+++..+..+++.+++..|+.+....+|..+++.+.|.+.| ..||+..|.+.+++++++.
T Consensus 331 g~~~-~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~-------------~~G~~~~f~~~~~~~l~~l 396 (491)
T PRK11010 331 GMGT-AAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVE-------------AHGWPTFYLFSVAAAVPGL 396 (491)
T ss_pred HHHH-HHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhChHHHHHHHHHHHHHHH
Confidence 2211 3345677888899999999999999999999999999999984 5588888999999998888
Q ss_pred HHHhhcccC
Q 010112 498 ICTLCVPES 506 (518)
Q Consensus 498 ~~~~~~~~~ 506 (518)
+...+++++
T Consensus 397 ~~~~~~~~~ 405 (491)
T PRK11010 397 LLLLVCRQT 405 (491)
T ss_pred HHHHHHHhc
Confidence 777765544
No 64
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.97 E-value=2e-28 Score=238.74 Aligned_cols=372 Identities=15% Similarity=0.080 Sum_probs=239.8
Q ss_pred HHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHH
Q 010112 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLIL 107 (518)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l 107 (518)
+.+..+...+....+.+.+|.+.+++ +.+..+.++..+++.+++.++++++|+++||+|||++++.+.++
T Consensus 21 ~~~~~~~~~~~~~~~~p~l~~i~~~~----------~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~ 90 (413)
T PRK15403 21 LILYDFAAYLTTDLIQPGIINVVRDF----------NADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALI 90 (413)
T ss_pred HHHHHHHHHHHHHhhccCHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHH
Confidence 34455667778888899999999999 99999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 108 MVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
++++++++.++++ ++.++++|+++|++.+...+....++.|++|+++|++++++......+|..+||.+++.+.
T Consensus 91 ~~~~~~~~~~a~~------~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~ 164 (413)
T PRK15403 91 FTLACAATLFTTS------MTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM 164 (413)
T ss_pred HHHHHHHHHHcCC------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998 7999999999999988767777888999999999999999999999999999999999887
Q ss_pred hhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcc
Q 010112 188 SAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELE 266 (518)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (518)
+.. +||+.|++.++..++..+. .+.+||+++.. .++.+.++..+
T Consensus 165 ~~~-----------------------gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~-~~~~~~~~~~~----------- 209 (413)
T PRK15403 165 HFV-----------------------HWKVLFAIIAVMGLIAFVGLLLAMPETVKRG-AVPFSAKSVLR----------- 209 (413)
T ss_pred Hhc-----------------------CHHHHHHHHHHHHHHHHHHHHHhCCCCcccc-CCCCChHHHHH-----------
Confidence 543 4999999988877766554 45578865420 00000000000
Q ss_pred hhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHh-cCCCCCcchhhhHHHHHHH
Q 010112 267 AEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAI-GWIPPAATMNAIHEVYKIA 345 (518)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~ 345 (518)
+.++.++++ .++............++....+.|.++++. |+++.+.+.
T Consensus 210 --------------~~~~ll~~~-------~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl---------- 258 (413)
T PRK15403 210 --------------DFRNVFRNR-------LFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAW---------- 258 (413)
T ss_pred --------------HHHHHHcCH-------HHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHH----------
Confidence 111112222 223333334444445556666778777763 565543222
Q ss_pred HHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCcccee
Q 010112 346 RAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATT 425 (518)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (518)
.......+.+++..+.+.+.++..+++.......+..++.+++....... .+..........+...+... ..|..
T Consensus 259 --~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~--~~~~~~~~~~~~l~~~G~~~-~~p~~ 333 (413)
T PRK15403 259 --TQVPVFGAVIVANAIVARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLW--PHVWLWSVLGTSLYAFGIGL-IFPTL 333 (413)
T ss_pred --HHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHc--cccHHHHHHHHHHHHHHHHH-HhHHH
Confidence 33444445555556666655444443433222222222222222111000 01111112222222222222 22333
Q ss_pred eeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 426 FVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
....-+. ....+|++.++.+.....+..+++...+++.+. +-...|...++++.+.....+
T Consensus 334 ~~~al~~-~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~--------------~~~~~~~~~~~~~~~~~~~~~ 394 (413)
T PRK15403 334 FRFTLFS-NNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN--------------GGRLPFHLLAVVAGVIVVFTL 394 (413)
T ss_pred HHHHhcc-CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc--------------CCchHHHHHHHHHHHHHHHHH
Confidence 2111111 222479999999999999999999999988632 334556555555444443333
No 65
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=1.8e-28 Score=240.18 Aligned_cols=393 Identities=10% Similarity=-0.006 Sum_probs=253.7
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhH
Q 010112 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKV 100 (518)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~ 100 (518)
....+....+.++..++++...++..|.+++++ ++++.+.|++.+.+.+++.+++++.|++.||+|||++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~----------~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~ 93 (438)
T PRK10133 24 YIIPFALLCSLFFLWAVANNLNDILLPQFQQAF----------TLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAG 93 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH
Confidence 445556667778888999999999999999999 9999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh---hhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHH
Q 010112 101 YGITLILMVISSIAS---GLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (518)
Q Consensus 101 ~~~~~~l~~i~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~ 177 (518)
+..+.++++++++++ .++++ ++.++++|+++|+|.|...+....++.|+.|+++|.+.+++.+..+.+|..
T Consensus 94 l~~g~~~~~~~~~l~~~~~~a~~------~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~ 167 (438)
T PRK10133 94 IITGLFLYALGAALFWPAAEIMN------YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAI 167 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC------HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHH
Confidence 999999999999886 45677 799999999999999999999999999988877777789999999999999
Q ss_pred HHHHHHHHHHhhcccCC-CCCCCCCCCCCCCCCCC---CCcchHHHHhhh-HHHHHHHHH-HhcCCCCcchhhhhhccHH
Q 010112 178 AGGIVALIVSSAFDHHF-KAPPYSVDPVGSTAPEA---DYVWRIVLMVGA-LPAALTYYW-RMRMPETARYTALVAKNAK 251 (518)
Q Consensus 178 lg~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~---~~~wr~~f~~~~-~~~~~~~~~-~~~~~esp~~~~~~~~~~~ 251 (518)
+++.++..+.....+.. ......+.. +...... -.+||++|+... +..++.++. ....||.+.. +++ +
T Consensus 168 ~g~~~g~~l~~~~~~~~~~~~~~~l~~-~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~----~~~-~ 241 (438)
T PRK10133 168 IAVVFGQSLILSNVPHQSQDVLDKMTP-EQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSD----NHS-D 241 (438)
T ss_pred HHHHHHHHHHhcCCcccchhhhhccCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc----ccc-c
Confidence 99999887652110000 000000000 0000000 024777776433 333333222 2334542211 000 0
Q ss_pred HHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHH-HH-hcCC
Q 010112 252 QAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIF-SA-IGWI 329 (518)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~g~~ 329 (518)
+... +..++.++.++++..+ ...+..++.....++...|.+.++ ++ .|++
T Consensus 242 ~~~~---------------------~~~~~~~~ll~~~~~~-------~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s 293 (438)
T PRK10133 242 AKQG---------------------SFSASLSRLARIRHWR-------WAVLAQFCYVGAQTACWSYLIRYAVEEIPGMT 293 (438)
T ss_pred cccc---------------------chhhhHHHHHhCchHH-------HHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCC
Confidence 0000 0000111222222221 111222233333344444556553 33 4666
Q ss_pred CCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHH
Q 010112 330 PPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIM 409 (518)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (518)
+... ........++.++|+++++++.||+++|+.+..+..+..+.+++..... ... ....
T Consensus 294 ~~~a------------g~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~-------~~~-~~~~ 353 (438)
T PRK10133 294 AGFA------------ANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAG-------GHV-GLIA 353 (438)
T ss_pred HHHH------------HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC-------ChH-HHHH
Confidence 5542 3366777788889999999999999999998888776665554443322 111 1222
Q ss_pred HHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCccc-chhHHHH
Q 010112 410 YSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIG-VKNSLIM 488 (518)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g-~~~~~~~ 488 (518)
+.+. +++.....|..++...|..|++ .+++.++..+ ..+|+.++|.+.|.+.| ..| .+..|++
T Consensus 354 ~~l~-glg~~~i~P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~-------------~~g~~~~~~~v 417 (438)
T PRK10133 354 LTLC-SAFMSIQYPTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSD-------------AAGNIPTAELI 417 (438)
T ss_pred HHHH-HHHHHHHHHHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHH-------------hccchHHHHHH
Confidence 2233 3333335677888888887654 6778888764 55789999999999984 344 5666665
Q ss_pred HHHHHHHHHHH
Q 010112 489 LGVVNFVGMIC 499 (518)
Q Consensus 489 ~~~~~~~~~~~ 499 (518)
..++.+...+.
T Consensus 418 ~~~~~~~~~~~ 428 (438)
T PRK10133 418 PALCFAVIFIF 428 (438)
T ss_pred HHHHHHHHHHH
Confidence 55544444443
No 66
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.97 E-value=2.9e-28 Score=237.34 Aligned_cols=337 Identities=13% Similarity=0.109 Sum_probs=223.1
Q ss_pred HHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHH
Q 010112 30 MGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMV 109 (518)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~ 109 (518)
+..+..........+..|.+.+++ +.+..+.++..+.+.++..+++++.|+++||+|||+++..+.++.+
T Consensus 10 ~~~~~~~~~~~~~~~~lp~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~ 79 (392)
T PRK10473 10 ALVLLYPAGIDMYLVGLPRIAADL----------NASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFI 79 (392)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHH
Confidence 334445555556668899999999 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010112 110 ISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSA 189 (518)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~ 189 (518)
++.+++.++++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.+....+|..++|.+++.+.+
T Consensus 80 i~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~- 152 (392)
T PRK10473 80 IASLLCSLAET------SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML- 152 (392)
T ss_pred HHHHHHHHhCc------HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-
Confidence 99999999888 78899999999999999889999999999999999999999999999999999999888763
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchh
Q 010112 190 FDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAE 268 (518)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (518)
..+||+.|++.++..++..+. ..++||+++. .++++ ++..+
T Consensus 153 ----------------------~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~-~~~~~------------- 194 (392)
T PRK10473 153 ----------------------KFPWQSLFYTMAAMGILVLLLSLFILKETRPA--RAPAA-SSKPR------------- 194 (392)
T ss_pred ----------------------CcChHHHHHHHHHHHHHHHHHHHHHcCCCCCc--ccCCc-cchHH-------------
Confidence 345999999987776665443 4556776432 10000 00000
Q ss_pred hhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHHHHHH
Q 010112 269 EDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYKIARA 347 (518)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~ 347 (518)
..++.++++.... ..... ............+.|.++. +.|+++.+ ...
T Consensus 195 ------------~~~~~~~~~~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~------------~~~ 243 (392)
T PRK10473 195 ------------ENSESLLNRFFLS---RLVIT----TLSVTVILTFVNTSPVLLMEQMGFSRGE------------YAI 243 (392)
T ss_pred ------------HHHHHHhCHHHHH---HHHHH----HHHHHHHHHHHHhCHHHHHHHcCCCHHH------------HHH
Confidence 0001112221111 11111 1111111122233344443 34554432 122
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
......++.+++.++.+++.||+|||+.+..+..+..++.+++..... .........+...+...+. +. .
T Consensus 244 ~~~~~~~~~i~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~~g~~~~~-~~--~ 313 (392)
T PRK10473 244 IMALTAGVSMTVSFSTPFALGIFKPRTLMLTSQVLFLAAGITLALSPS-------HAVSLFGITLICAGFSVGF-GV--A 313 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHh-HH--H
Confidence 455566677788899999999999999998888877776666655431 1111121122111111211 11 2
Q ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 428 VPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
...+..|.+.|+ |.......++..+++.+.+.+.+
T Consensus 314 ~~~~~~~~~~~~---g~~~~~~~~~~~~g~~~~~~l~~ 348 (392)
T PRK10473 314 MSQALGPFSLRA---GVASSTLGIAQVCGSSLWIWLAA 348 (392)
T ss_pred HHHHhccCcccc---cHHHHHHHHHHHHHHHHHHHHHH
Confidence 223444544443 44444555677777777777764
No 67
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=3.8e-28 Score=235.56 Aligned_cols=336 Identities=17% Similarity=0.178 Sum_probs=225.2
Q ss_pred hhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhh
Q 010112 38 DLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGL 117 (518)
Q Consensus 38 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~ 117 (518)
....+.|..|.+.+++ |+++.+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++.+
T Consensus 6 ~~~~~~p~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~ 75 (377)
T PRK11102 6 AIDMYLPALPVIAADF----------GVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACAL 75 (377)
T ss_pred HHHHHhccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHH
Confidence 3455678889999999 999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 010112 118 SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAP 197 (518)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~ 197 (518)
+++ ++.+++.|+++|++.+...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..
T Consensus 76 ~~~------~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~------- 142 (377)
T PRK11102 76 AQT------IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF------- 142 (377)
T ss_pred Hcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-------
Confidence 988 7999999999999999999999999999999999999999999999999999999999887544
Q ss_pred CCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhh
Q 010112 198 PYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLS 276 (518)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (518)
+||+.|++.+++.++..+. .+++||+++..+.++.+.++.. +
T Consensus 143 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~--- 185 (377)
T PRK11102 143 ----------------SWHAIFWVLALAAILAAALVFFFIPETLPKERRQPFHLRTTI------------------R--- 185 (377)
T ss_pred ----------------ChHHHHHHHHHHHHHHHHHHHHhCCccCcccccCCCChHHHH------------------H---
Confidence 4999999887777665443 4567776432100000000000 0
Q ss_pred hccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHHHHHHHHHHHHhh
Q 010112 277 QRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYKIARAQTLIALCS 355 (518)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (518)
+.++.++++. .+......+......+....+.|.++. ..|+++.+. ........++
T Consensus 186 ----~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~------------g~~~~~~~~~ 242 (377)
T PRK11102 186 ----NFASLFRHKR-------VLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNF------------GYYFALNIVF 242 (377)
T ss_pred ----HHHHHHcChH-------HHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHH------------HHHHHHHHHH
Confidence 0011111111 111222222222233333344454443 356654432 2255666677
Q ss_pred cccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccch
Q 010112 356 TVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPA 435 (518)
Q Consensus 356 ~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 435 (518)
.+++.++.+++.||+|||+.+..+..+..+..+.+...... +...+.......+....... ..+.......|..|
T Consensus 243 ~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~- 317 (377)
T PRK11102 243 LFVMTIINSRFVRRVGALNMLRFGLWIQFIMGIWLVVSALL---DLGFWALVVGVAAFVGCVSM-ISSNAMAVILDEFP- 317 (377)
T ss_pred HHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHH-hhHHHHHHHhcccc-
Confidence 88889999999999999999888776544433222211100 00112222222222222222 22233345567655
Q ss_pred hhhhhHHHHHHHHHH-HHHHHHHhhhH
Q 010112 436 RLRSTCHGISAAAGK-AGAIVGAFGFL 461 (518)
Q Consensus 436 ~~~~~~~g~~~~~~~-~g~~~~~~~~g 461 (518)
+.++++.++.+.... ++..+++.+.+
T Consensus 318 ~~~g~~~~~~~~~~~~~g~~~g~~~~~ 344 (377)
T PRK11102 318 HMAGTASSLAGTLRFGIGAIVGALLSL 344 (377)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 789999999877654 66666666543
No 68
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.97 E-value=1.6e-27 Score=231.64 Aligned_cols=363 Identities=14% Similarity=0.139 Sum_probs=238.5
Q ss_pred hhhhhhhHHHHHHH-hhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHH
Q 010112 33 FTDAYDLFCISLVT-KLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVIS 111 (518)
Q Consensus 33 ~~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~ 111 (518)
++........-+.. +.+.+++ ++|..+.|++.+...++..+.+++.|+++||+|||+++..+.++.+++
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~ 89 (400)
T PRK11646 20 MLVVLGFFVVFPLISIRFVDQL----------GWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAG 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh----------CCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHH
Confidence 33333333434444 4466778 999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 112 SIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 112 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
.+++.+.++ ++.+++.|+++|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+. .
T Consensus 90 ~~~~~~~~~------~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~-- 160 (400)
T PRK11646 90 FATMAIAHE------PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q-- 160 (400)
T ss_pred HHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H--
Confidence 999999887 7899999999999998888999999999999999999999999999999999999999986 2
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhh
Q 010112 192 HHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEED 270 (518)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (518)
++||+.|++.++..++..+. .++.||.++. +..++..+
T Consensus 161 ---------------------~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~-----~~~~~~~~--------------- 199 (400)
T PRK11646 161 ---------------------YDFRLVCATGAVLFVLAAAFNAWLLPAYKLS-----TVRTPVRE--------------- 199 (400)
T ss_pred ---------------------hhHHHHHHHHHHHHHHHHHHHHHhCCccccc-----ccchhhHH---------------
Confidence 34999999987776654433 3445553210 00000000
Q ss_pred HhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHH
Q 010112 271 KVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTL 350 (518)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 350 (518)
+.++.++++.. +......+.....+.....+.|.+.++.+.++.. .+. ...
T Consensus 200 ----------~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-----------~g~-l~~ 250 (400)
T PRK11646 200 ----------GMTRVLRDKRF-------VTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSA-----------VKW-MYA 250 (400)
T ss_pred ----------HHHHHHcCchH-------HHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchH-----------HHH-HHH
Confidence 00111112111 1111111222222222345677777775544332 222 222
Q ss_pred HHHhhccc-chhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeecc
Q 010112 351 IALCSTVP-GYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVP 429 (518)
Q Consensus 351 ~~~~~~~~-~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (518)
...+.... ..+...+..||++.++.+..+..+.+++..++.... +......... ..+.+.....|...++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~-l~~~g~~~~~p~~~~~~ 322 (400)
T PRK11646 251 IEACLSLTLLYPIARWSEKRFRLEHRLMAGLLIMSLSMFPIGMVS-------NLQQLFTLIC-LFYIGSIIAEPARETLS 322 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHH-HHHHHHHHHHccHHHHH
Confidence 22222222 233344444556666666666666666665554433 1222222222 22222223345566788
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 430 AEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 430 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
.|..|+++||+++|+.+....+|..++|.+.|.+.|..+. .......+...+++.+++.+...
T Consensus 323 ~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 323 ASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGKA---------LNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHhh---------cCCcchHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999975431 11234556666666666655444
No 69
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=8.2e-28 Score=233.25 Aligned_cols=366 Identities=10% Similarity=0.085 Sum_probs=243.4
Q ss_pred HHHhhhhhhhHHHHHHHh-hhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHH
Q 010112 30 MGFFTDAYDLFCISLVTK-LLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILM 108 (518)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~ 108 (518)
+..++.........+.+| .+.+++ |++..+.|++.+.+.++..+++++.|+++||+|||+++..+.++.
T Consensus 14 ~~~~~~~~g~~~~~~~l~~~l~~~~----------g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~ 83 (395)
T PRK10054 14 ASSLLLTIGRGATLPFMTIYLSRQY----------SLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAF 83 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHH
Confidence 344445555555555544 466778 999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010112 109 VISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSS 188 (518)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~ 188 (518)
+++.++.++.++ ++.++++|++.|.+.+...+...++..|.+|+++|+++.++.....++|.+++|.+++.+..
T Consensus 84 ~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~ 157 (395)
T PRK10054 84 ASGFIAIPLVNN------VTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM 157 (395)
T ss_pred HHHHHHHHHHhH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999888 78888899999988787788899999999999999999999999999999999999998862
Q ss_pred hcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcch
Q 010112 189 AFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEA 267 (518)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (518)
.+||..|++.++..++..+. .+++||+++. . +++++ +
T Consensus 158 ------------------------~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~--~--~~~~~--~------------ 195 (395)
T PRK10054 158 ------------------------QSINLPFWLAAICSAFPLVFIQIWVQRSEKA--I--ATETG--S------------ 195 (395)
T ss_pred ------------------------hccCcHHHHHHHHHHHHHHHHHHHHhccccc--c--ccchh--h------------
Confidence 24999999887776665443 3445554321 0 00000 0
Q ss_pred hhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHH
Q 010112 268 EEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARA 347 (518)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (518)
. .+.++.++++.. +......++....+.....+.+.+.... ... + .+.. ....
T Consensus 196 ---~--------~~~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~--~----~~~~-~~g~ 248 (395)
T PRK10054 196 ---V--------WSPSVLLQDKAL-------LWFTCSGFLASFVSGAFASCISQYVMVV--ADS--D----FAEK-VVAV 248 (395)
T ss_pred ---h--------hhhhhhccCcee-------hHHHHHHHHHHHHHHHhhhhHHHHHHHh--ccc--c----hHHH-HHHH
Confidence 0 000111122211 1122222222222222222334443321 000 0 0111 1122
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
......+..+......+++.||.++|+.+..+..+..++...+..... +.+.. .+.....+.+.....|....
T Consensus 249 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~-~~~~~~~~~g~~~~~p~~~~ 321 (395)
T PRK10054 249 VLPVNAAMVVSLQYSVGRRLNAANIRPLMTAGTLCFVIGLVGFIFSGN------SLLLW-GMSAAVFTVGEIIYAPGEYM 321 (395)
T ss_pred HHHhhhhheeeehhHHHHHHccCCchhHHHHHHHHHHHHHHHHHHcch------HHHHH-HHHHHHHHHHHHHHHhhHHH
Confidence 444444555666678889999999999988887777776665543321 12222 22233333333333456667
Q ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 428 VPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
.+.+..|++.|+++.+..+ ..++|..++|.+.|.+.| ..|+...|.+.+.+..+..++.+
T Consensus 322 ~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~-------------~~g~~~~~~~~~~~~~~~~~~~~ 381 (395)
T PRK10054 322 LIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILT-------------TLPPWSLFVILALAIVAAWLLML 381 (395)
T ss_pred HHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHH-------------HcChhhHHHHHHHHHHHHHHHHH
Confidence 7888899999999988765 677999999999999995 45666677766655555554444
No 70
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.96 E-value=2.8e-27 Score=229.75 Aligned_cols=391 Identities=12% Similarity=-0.014 Sum_probs=256.4
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHH
Q 010112 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGIT 104 (518)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~ 104 (518)
+..++..++..++.....++..|.+++++ |+++.+.|++.+.+.+++.+++++.|++.||+|||+++..+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~~~~~----------~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g 74 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQFQQAF----------TLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLG 74 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 34556777888888889999999999999 99999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhc---cCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 010112 105 LILMVISSIASGLS---FGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (518)
Q Consensus 105 ~~l~~i~~~~~~~~---~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~ 181 (518)
.++++++.+++..+ ++ ++.+++.|++.|+|.|...+....++.+..|+++|++.+++.+...++|..+++.
T Consensus 75 ~~l~~~g~~l~~~~~~~~~------~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~ 148 (410)
T TIGR00885 75 LFLYALGAFLFWPAAEIMN------YTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMV 148 (410)
T ss_pred HHHHHHHHHHHHHHHhhcc------HHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999886543 35 7999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCC-CCCCCCCCCC--CCCCCCCcchHHHHhhhHHHHHHHHHHhc--CCCCcchhhhhhccHHHHHHH
Q 010112 182 VALIVSSAFDHHFKA-PPYSVDPVGS--TAPEADYVWRIVLMVGALPAALTYYWRMR--MPETARYTALVAKNAKQAAAD 256 (518)
Q Consensus 182 l~~~l~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~wr~~f~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~ 256 (518)
++..+.......... ......+... .......+||++|++.+++.++..+...+ .||.++. ++++++.
T Consensus 149 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~----~~~~~~~--- 221 (410)
T TIGR00885 149 VAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKMPALNHS----DAKQISF--- 221 (410)
T ss_pred HHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc----ccccccc---
Confidence 998886332100000 0000000000 00001246999999887776655444322 3332110 0000000
Q ss_pred HHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchh
Q 010112 257 MSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMN 336 (518)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 336 (518)
..+..+.++++. .+......++..........+.+.+.++.+...+. +
T Consensus 222 ----------------------~~~~~~~~~~~~-------~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~-~-- 269 (410)
T TIGR00885 222 ----------------------SASLSRLARIRH-------YREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTA-G-- 269 (410)
T ss_pred ----------------------hhhHHHHHhChh-------HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCH-H--
Confidence 000011112221 11122223333334444556667776553322211 0
Q ss_pred hhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHH
Q 010112 337 AIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFF 416 (518)
Q Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (518)
.+............+|+++++++.||+++|+.+.....+..++.++..... . ......+.+.+++
T Consensus 270 -------~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~-------~-~~~~~~l~~~glf 334 (410)
T TIGR00885 270 -------FAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAG-------G-HVGLYCLTLCSAF 334 (410)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcC-------C-hHHHHHHHHHHHH
Confidence 111123333355667999999999999999998888777777776666543 1 1223333344444
Q ss_pred HhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcc-cchhHHHHHHHHHHH
Q 010112 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGI-GVKNSLIMLGVVNFV 495 (518)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~ 495 (518)
.+. ..|..++...+..+++.+..+.++.... +|+.+.|.+.|.+.|..+. .+. +++..|++...+.+.
T Consensus 335 ~s~-~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~~~--------~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 335 MSL-MFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMKEI--------AAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHH-HHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHhcc--------cccCccchHHHHHHHHHHH
Confidence 444 3488888889998887665555554443 9999999999999963321 011 466667665444443
Q ss_pred H
Q 010112 496 G 496 (518)
Q Consensus 496 ~ 496 (518)
.
T Consensus 404 ~ 404 (410)
T TIGR00885 404 I 404 (410)
T ss_pred H
Confidence 3
No 71
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.96 E-value=2.4e-27 Score=230.42 Aligned_cols=362 Identities=13% Similarity=0.091 Sum_probs=228.0
Q ss_pred HhhhhhhhHHHHHHHhh-hhhhhcccCCCCCCCCCCchhhHHHHHHHHH-HHHhhhhhhhhhhhhcchhhHH-HHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKL-LGRIYYHVDGAKKPGTLPPNVSAAVNGVALC-GTLAGQLFFGWLGDKLGRKKVY-GITLILM 108 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~l-g~~i~~~~~G~l~dr~Grr~~~-~~~~~l~ 108 (518)
.++.........+..|. +.+++ +.+.++.|++.+...+ +..++.+++++ +||+||||.+ ..+.++.
T Consensus 24 ~~~~~~~~~~~~p~~~~~l~~~~----------~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~ 92 (393)
T PRK15011 24 AFLTGIAGALQTPTLSIFLTDEV----------HARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLG 92 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHH
Confidence 44455555555565555 57788 9999999999876655 66666655666 9999999874 5666777
Q ss_pred HHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccc--hhHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 109 VISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTR--GAFIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r--g~~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
+++..+.+++++ ++.+++.+.+.|...+...|...+++.|+.++++| +...++.+.+.++|.+++|++++.+
T Consensus 93 ~~~~~~~~~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l 166 (393)
T PRK15011 93 VLACTLFAWNRN------YFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYAL 166 (393)
T ss_pred HHHHHHHHHhhH------HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 788888888887 67766555554444556678888888998877655 3455788889999999999999999
Q ss_pred HhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhc
Q 010112 187 SSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVEL 265 (518)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (518)
.+..+ ||..|++.++..++..+. ..++||.++.. +++++
T Consensus 167 ~~~~g-----------------------w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-------------- 206 (393)
T PRK15011 167 AMGFS-----------------------FTVMYLSAAVAFIVCGVMVWLFLPSMRKEL---PLATG-------------- 206 (393)
T ss_pred HHhcC-----------------------hHHHHHHHHHHHHHHHHHHHhhcCccCCCC---ccccc--------------
Confidence 75444 999999988776665444 45578765321 00000
Q ss_pred chhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHH
Q 010112 266 EAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKI 344 (518)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~ 344 (518)
+ .+ .. ++ . ++......... ......++....+.|.++++ .++++.+.
T Consensus 207 --~---~~-------~~----~~-~-~~~~~~~~~~~---~~~~~~~~~~~~~~p~~l~~~~~~~~~~~----------- 254 (393)
T PRK15011 207 --T---LE-------AP----RR-N-RRDTLLLFVIC---TLMWGTNSLYIINMPLFIINELHLPEKLA----------- 254 (393)
T ss_pred --c---cc-------cc----cc-c-cccHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHcCCCHHHH-----------
Confidence 0 00 00 00 0 00001111111 11122333344567766654 55554331
Q ss_pred HHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccce
Q 010112 345 ARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNAT 424 (518)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518)
+. ......+..+++.++.|+++||++||+.+..+.....+......... +....+....+....... ..+.
T Consensus 255 g~-~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~~l~~~~~g~-~~~~ 325 (393)
T PRK15011 255 GV-MMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAH-------SPAILLGLQLLNAIYIGI-LGGI 325 (393)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHh-------hHHHHHHHHHHHHHHHHH-HHHH
Confidence 22 33334455677888999999999999987766555444333322211 122222222211111111 1122
Q ss_pred eeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcc
Q 010112 425 TFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVP 504 (518)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (518)
...+..|..|+ .|+++.++.+...++|..++|.+.|.+. +..||+..+.+.+++.+++.+..++.|
T Consensus 326 ~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 326 GMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVA-------------EIWNYHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHH-------------HHhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 33556788775 4999999999999999999999999998 456888888888888888877777665
Q ss_pred c
Q 010112 505 E 505 (518)
Q Consensus 505 ~ 505 (518)
|
T Consensus 392 ~ 392 (393)
T PRK15011 392 D 392 (393)
T ss_pred C
Confidence 4
No 72
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=6.4e-28 Score=233.11 Aligned_cols=356 Identities=17% Similarity=0.204 Sum_probs=233.9
Q ss_pred HHHHHHhhhhhhhHHHHHHHhh-hhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHH
Q 010112 27 IAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITL 105 (518)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~ 105 (518)
..+++.+....+...+++..|. +++++ |+++.+.+++.+++.+++.+++++.|+++||+|||+++..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDL----------GLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSL 74 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHh----------CCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHH
Confidence 4556667777788888999995 88999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcc-CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 010112 106 ILMVISSIASGLSF-GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVAL 184 (518)
Q Consensus 106 ~l~~i~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~ 184 (518)
++.+++.+++++++ + ++.+++.|+++|++.+. .+....++.|++|+++|+++.++.....++|..+++.+++
T Consensus 75 ~~~~i~~~~~~~~~~~------~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~ 147 (366)
T TIGR00886 75 LLLAIPCLWAGLAVQS------YSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMP 147 (366)
T ss_pred HHHHHHHHHHHHHhhh------HHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHH
Confidence 99999999999998 7 79999999999998664 5667899999999999999999999888889888888887
Q ss_pred HHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHH-HhhhHHHHH-HHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHh
Q 010112 185 IVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVL-MVGALPAAL-TYYWRMRMPETARYTALVAKNAKQAAADMSKVLQ 262 (518)
Q Consensus 185 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f-~~~~~~~~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~ 262 (518)
.+......... .+...+||+.| +..++...+ .++...+.+|+|+.. + ++.+...+ +
T Consensus 148 ~l~~~~~~~~~-------------~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~---~--- 205 (366)
T TIGR00886 148 PIIGSLIFGAG-------------LPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK--P-ATGKLSFK---G--- 205 (366)
T ss_pred HHHHHHHhccc-------------ccccccccchhHHHHHHHHHHHHHHHHHhcccCCccc--c-cchhcccc---c---
Confidence 77653321000 01234699999 443444333 333345567665421 0 00000000 0
Q ss_pred hhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHH
Q 010112 263 VELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEV 341 (518)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 341 (518)
+.... + ++..++.++.++++ ..+......+......+....+.|.++++ .|+++.+.
T Consensus 206 -~~~~~----~--~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-------- 263 (366)
T TIGR00886 206 -ARWSV----G--TGALGDQLKVFRDR-------HTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTA-------- 263 (366)
T ss_pred -ccccc----c--chhHHHHHHHHhcc-------chhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH--------
Confidence 00000 0 00000111112211 12223333333334455566677777765 46655432
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCc
Q 010112 342 YKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGP 421 (518)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (518)
........+..+++.++++++.||+|||+.+..+......+..++..... ...+.........+.....+. .
T Consensus 264 ----~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~-~ 335 (366)
T TIGR00886 264 ----GAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLV---SPLSLAVFIVLFVALFFFSGA-G 335 (366)
T ss_pred ----HHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCC---CcchHHHHHHHHHHHHHHhcc-c
Confidence 22455556667778889999999999998877777666665555543321 000122222222222223333 2
Q ss_pred cceeeeccccccchhhhhhHHHHHHHHHHHH
Q 010112 422 NATTFVVPAEIFPARLRSTCHGISAAAGKAG 452 (518)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g 452 (518)
.+..+.+..+..| +++|+++|+.+..+++|
T Consensus 336 ~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 336 NGSTFALVPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred cchhhhcchhhch-hhcccHHHHHHHhccCC
Confidence 3456677788876 68999999999988765
No 73
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.96 E-value=6e-27 Score=228.32 Aligned_cols=350 Identities=15% Similarity=0.110 Sum_probs=230.7
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHH
Q 010112 22 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVY 101 (518)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~ 101 (518)
++.+.+..+..++..+......+..|.+.+++ |.|+.+.+++.+.+.++..+++++.|+++||+|||+++
T Consensus 7 ~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~~~----------~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~ 76 (394)
T PRK11652 7 VNLLFMLVLLVAVGQMAQTIYVPAIADMARDL----------NVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVI 76 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHH
Confidence 34444455555566667777788899999999 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 010112 102 GITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (518)
Q Consensus 102 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~ 181 (518)
..+.++..++.+++.++++ ++.+++.|++.|++.+...+....+..|.+++++|+++.++...+..+|..++|.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~------~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 150 (394)
T PRK11652 77 LVGMSIFILGTLVALFAHS------LTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPL 150 (394)
T ss_pred HHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888 7999999999999988888888889999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHH-HHhcCCCCcchhhhhhccHHHHHHHHHHH
Q 010112 182 VALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYY-WRMRMPETARYTALVAKNAKQAAADMSKV 260 (518)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~esp~~~~~~~~~~~~~~~~~~~~ 260 (518)
+++.+.+. .+||+.|++.++..++..+ ..++.||+++.. +++++..+.
T Consensus 151 i~~~l~~~-----------------------~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~---- 199 (394)
T PRK11652 151 IGGLLTTL-----------------------FGWRACYLFLLLLGAGVTFSMARWMPETRPAD----ARRTRVLAS---- 199 (394)
T ss_pred HHHHHHhc-----------------------cChHHHHHHHHHHHHHHHHHHHHhCCccCccc----cchhHHHHH----
Confidence 99988643 4499999998776655433 345678765431 010000000
Q ss_pred HhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhH
Q 010112 261 LQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIH 339 (518)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~ 339 (518)
.++.++++..+. .....+ ...........+.+.++++ .|+++.+
T Consensus 200 ---------------------~~~~~~~~~~~~----~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~------- 244 (394)
T PRK11652 200 ---------------------YRTLLSNRRFNC----YLLMLI---GTLAGIAVFEACSGVLMGAVLGLSSMT------- 244 (394)
T ss_pred ---------------------HHHHHcChHHHH----HHHHHH---HHHHHHHHHHHhChHHHHHHcCCCHHH-------
Confidence 011112221111 111111 1111222222333445554 4554432
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhc
Q 010112 340 EVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANF 419 (518)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (518)
. ........++.+++.++.+++.||.+++... ......+..+.+.... .....+.+.......+.+....
T Consensus 245 ----~-~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~- 314 (394)
T PRK11652 245 ----V-SILFILPIPAAFFGAWFAGRPNKRFSTLMWQ--SVICCLLAGLLMWIPG--WFGVMNVWTLLVPAALFFFGAG- 314 (394)
T ss_pred ----H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHH--HhccccHHHHHHHHHHHHHHHH-
Confidence 1 1234445566677777788888888733322 2222222211111111 0000111222222222222222
Q ss_pred CccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhh
Q 010112 420 GPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAA 464 (518)
Q Consensus 420 ~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 464 (518)
...|....+..|.+| ++++++.++.+....+|..+++.+.+.+.
T Consensus 315 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~~~~ 358 (394)
T PRK11652 315 MLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSAMLP 358 (394)
T ss_pred HHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 245566667778776 57899999999999999999999998875
No 74
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.96 E-value=6.7e-27 Score=228.08 Aligned_cols=386 Identities=11% Similarity=0.040 Sum_probs=242.3
Q ss_pred HhhhhhhhHHH-HHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcch-hhHHHHHHHHHH
Q 010112 32 FFTDAYDLFCI-SLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGR-KKVYGITLILMV 109 (518)
Q Consensus 32 ~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Gr-r~~~~~~~~l~~ 109 (518)
.+..+...... ++..+.+.+++ |++..+.|++.+++.++..++++++|.++||+|| |+++.++.++.+
T Consensus 11 ~~~~~~~~~~~~~~l~~~l~~~~----------g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~ 80 (418)
T TIGR00889 11 SFLQWFIWGSWLVTLGSYMSKTL----------HFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGA 80 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 34444444444 56666677778 9999999999999999999999999999999965 778888899998
Q ss_pred HHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhh--------hhcccccchhHHHHHHHHHHHHHHHHHH
Q 010112 110 ISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMS--------EYANKKTRGAFIAAVFAMQGFGILAGGI 181 (518)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~--------e~~~~~~rg~~~~~~~~~~~lG~~lg~~ 181 (518)
++..+..+.++ ++.+++.|++.|++.+...+...++.. |......|.+..| .+|.++++.
T Consensus 81 ~~~~~~~~~~~------~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~ 148 (418)
T TIGR00889 81 LLLFFAAQVTT------PAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMW 148 (418)
T ss_pred HHHHHHHHhcC------HHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHH
Confidence 88888888888 788999999999987777666655532 2223334555544 367888888
Q ss_pred HHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHH
Q 010112 182 VALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVL 261 (518)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~ 261 (518)
+++.+.. ...|+ +|++.++..++..+..+++||+|+.. ++++.+. .+
T Consensus 149 l~g~l~~-----------------------~~~~~-~f~~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~~-~~------ 195 (418)
T TIGR00889 149 AVSLLDI-----------------------ELSNI-QLYITAGSSALLGVFALTLPDIPVAK--STAKMSI-KV------ 195 (418)
T ss_pred HHHHhcc-----------------------cchhH-HHHHHHHHHHHHHHHHhcCCCCCCCc--cccccCH-HH------
Confidence 8877631 11254 45555555555544556788876421 1110000 00
Q ss_pred hhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHH
Q 010112 262 QVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEV 341 (518)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 341 (518)
..+.+..+.++++.. +......++..........+.+.++++.|.++.... +..
T Consensus 196 ---------------~~~~~~~~~~k~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~----~~~ 249 (418)
T TIGR00889 196 ---------------MLGLDAFILFKNKRM-------AIFFFFSMLLGAPLQITNIFGNGFLHEFGRNPEFAD----SFV 249 (418)
T ss_pred ---------------HhhhhHHHHhcCCCe-------eeHHHHHHHHHhHHHHHHHhHHHHHHHhcccccccc----hhh
Confidence 000000111122211 112222222222233334555667766665543210 000
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCc
Q 010112 342 YKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGP 421 (518)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (518)
............+..+++.+..+++.||+|+|+.+..+.++.+++..++..... .........+..+..+......
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~----~~~~~~~l~l~~~l~g~~~~~~ 325 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDP----EYFGYALLFLSMIVYGCAFDFF 325 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc----chhhHHHHHHHHHHHHHHHHHH
Confidence 112233556666677788889999999999999999998888877666554321 0001122222222222222223
Q ss_pred cceeeeccccccchhhhhhHHHHHH-HHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 422 NATTFVVPAEIFPARLRSTCHGISA-AAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~~~-~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
.+....++.|.+|++.|++++|+.+ ....+|.+++|.+.|.+.|..+.. ...||+..|.+.+++.+++.+..
T Consensus 326 ~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~-------~~~~~~~~f~~~~~~~~i~~~l~ 398 (418)
T TIGR00889 326 NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAY-------GTFDWQTMWLFFAGYIAILAVLF 398 (418)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccc-------cCCchHHHHHHHHHHHHHHHHHH
Confidence 4455567899999999999999997 567799999999999999755410 11479999998888888877766
Q ss_pred h-hcccCCCC
Q 010112 501 L-CVPESKGR 509 (518)
Q Consensus 501 ~-~~~~~~~~ 509 (518)
+ +++|+++.
T Consensus 399 ~~~~~~~~~~ 408 (418)
T TIGR00889 399 MIFFKYSHNA 408 (418)
T ss_pred HHHhCCcccC
Confidence 6 66766543
No 75
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.96 E-value=1.4e-26 Score=224.10 Aligned_cols=363 Identities=12% Similarity=0.028 Sum_probs=249.7
Q ss_pred HHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHH----HH
Q 010112 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVY----GI 103 (518)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~----~~ 103 (518)
+.+.++..+.......|.+|.+.+++ +.|..++|++.+++.++..++++++|+++||+|||+.. ..
T Consensus 9 l~~~~~~~~~~~~~~~p~l~~~l~~~----------g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 78 (382)
T TIGR00902 9 LALGFFGYFCAYGIFLPFFPAWLKGI----------GLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLAL 78 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 44556666777788889999999999 99999999999999999999999999999999985433 22
Q ss_pred HHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 010112 104 TLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVA 183 (518)
Q Consensus 104 ~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~ 183 (518)
+..+..+ ..+..+++ ++.+++.|+++|.+.+...|...++..|+ .++|++..+....+.++|.+++|.++
T Consensus 79 ~~~l~~~--~~~~~~~~------~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~ 148 (382)
T TIGR00902 79 ASAIFAA--AFSAGAHN------AWLLFIAIGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALF 148 (382)
T ss_pred HHHHHHH--HHHHhhhh------HHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHH
Confidence 2222222 23345666 79999999999999888889988888765 47889999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhh
Q 010112 184 LIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQV 263 (518)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~ 263 (518)
+.+.+..+ ||..|++.++..++..+.. .++|+++. .+++++++
T Consensus 149 g~l~~~~g-----------------------~~~~f~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~----------- 191 (382)
T TIGR00902 149 GGLIGMFD-----------------------EQNILAILTAGLAFMLIGF-LIKPTIPP--KDAIPEDE----------- 191 (382)
T ss_pred HHHHHHcC-----------------------hhHHHHHHHHHHHHHHHHH-HcCCCCCC--Cccccccc-----------
Confidence 99986554 9999988655433333323 33443211 00000000
Q ss_pred hcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHH
Q 010112 264 ELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYK 343 (518)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (518)
.+..++..+.++++ .++......++..........+.|.++++.|.++...+.
T Consensus 192 ------------~~~~~~~~~~l~~~-------~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~g~s~~~~g~-------- 244 (382)
T TIGR00902 192 ------------SQGDSAFIALLKNP-------MNLRFLAAVCLIQGAHAAYYGFSAIYWQAAGISASATGL-------- 244 (382)
T ss_pred ------------cccchhHHHHHcCh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHhHHHH--------
Confidence 00000111222222 222233333333444555556778888887777655322
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccc
Q 010112 344 IARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNA 423 (518)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518)
......+..+++.++.+++.||+|+|+.+..+.+...+...++.... +.+.......+.+..... ..+
T Consensus 245 ----l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~q~l~g~~~~~-~~~ 312 (382)
T TIGR00902 245 ----LWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIE-------AFPLIFLLQILHCGTFAV-CHL 312 (382)
T ss_pred ----HHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHh-------hHHHHHHHHHHHHHHHHH-HHH
Confidence 45567778888888999999999999999999999888887776544 233333333333333333 344
Q ss_pred eeeeccccccchhhhhhHHHHHHH-HHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 424 TTFVVPAEIFPARLRSTCHGISAA-AGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
....++.+. |++.|++++++++. ...+|..++|.+.|.+.| ..|+ ..|.+.+++.+++.++..
T Consensus 313 ~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~-------------~~g~-~~~~~~~~~~~~~~~~~~ 376 (382)
T TIGR00902 313 AAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYP-------------TLGA-GTFVFMAIIAAAAFFLIP 376 (382)
T ss_pred HHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hccH-HHHHHHHHHHHHHHHHHH
Confidence 556677887 99999999999875 456999999999999984 4454 567777777776655443
No 76
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.96 E-value=5.3e-28 Score=215.39 Aligned_cols=348 Identities=15% Similarity=0.091 Sum_probs=211.7
Q ss_pred CCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccc
Q 010112 65 LPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGD 144 (518)
Q Consensus 65 ~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 144 (518)
.+....|.+.|.+.+.+.+.++.+|.++||+|||++++++++..++..++.+++++ |..+.++|++.|+..| .
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~------F~afv~aR~l~Gi~kg-n 137 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRN------FAAFVLARFLGGIFKG-N 137 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHhhhhccC-c
Confidence 57778999999999999999999999999999999999999999999999999999 8777778999999777 5
Q ss_pred cchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhH
Q 010112 145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGAL 224 (518)
Q Consensus 145 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~ 224 (518)
..+..++++|.+++|+|+++++.+...+++|.++||++|+++.+.... ...+-.-.+-++..+
T Consensus 138 l~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~-----------------~g~~p~alP~~~v~i 200 (451)
T KOG2615|consen 138 LSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSI-----------------SGSYPFALPCLLVFI 200 (451)
T ss_pred hHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhh-----------------hccCchHHHHHHHHH
Confidence 688999999999999999999999999999999999999999862110 001112222233333
Q ss_pred HHHH-HHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHH
Q 010112 225 PAAL-TYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTS 303 (518)
Q Consensus 225 ~~~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (518)
++.. ..+..+++||+-+.. +++ ++ .....+..+.+ .+..+.. ........+++..+......-...+
T Consensus 201 ~a~~~v~~~~~~lpETL~~r---k~~-~~-~~~~~~~~~~~-----~~~~~~~--~~~~v~~lrn~p~~~~i~~~~i~~l 268 (451)
T KOG2615|consen 201 LAAGDVTFFPWFLPETLPLR---KRN-DE-HSTLQEAADDR-----LALLKFA--RIFKVAALRNPPLLDFISVLRIFGL 268 (451)
T ss_pred HHHHHHHHHHHhCCccccch---hhc-cc-ccchhhhhhhh-----hhhcchh--hhhhhhhhcCccccchHHHHHHHHH
Confidence 3333 334457789985431 111 10 00010000000 0000000 0000111122222111111122222
Q ss_pred HHHHHHHHHHhHHhhHHHHH-HHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhcc--ChhHHHHHH
Q 010112 304 TWFLLDIAFYSQNLFQKDIF-SAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMG--RFAIQMMGF 380 (518)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--~r~~~~~~~ 380 (518)
..+.....+.....+.+.+. ...|+++.+.+. .....++...+....-....+|.. .+-.+....
T Consensus 269 ~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~------------vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l 336 (451)
T KOG2615|consen 269 HYFLYLELFSGLENTVLFLTHGRFGYSSMQQGK------------VLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSL 336 (451)
T ss_pred HHHHHHHHHHHHHhhHHHhhcCccCCChhhhee------------eeehhhHHHHHHHHhccccccccccchhhHHHHHH
Confidence 33333333333333444332 447888887554 333333333322222233344433 333444454
Q ss_pred HHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 010112 381 FFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGF 460 (518)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 460 (518)
.++.-..+++.... . ...+........+.+....+-...+.....|.++||+++|+....+.++.++||.+.
T Consensus 337 ~~~vP~~llls~~~-------~-~~~l~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~ 408 (451)
T KOG2615|consen 337 LLIVPAFLLLSLAR-------T-PVVLYLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVS 408 (451)
T ss_pred HHHHHHHHHHhccc-------c-chhhhHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhh
Confidence 44444444444333 1 122222222222222323344556778889999999999999999999999999999
Q ss_pred HhhhhcCC
Q 010112 461 LYAAQSKD 468 (518)
Q Consensus 461 g~l~~~~~ 468 (518)
|.+..+..
T Consensus 409 g~i~~Ws~ 416 (451)
T KOG2615|consen 409 GVIFSWSQ 416 (451)
T ss_pred heeEEEec
Confidence 99987654
No 77
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.96 E-value=7.5e-27 Score=224.25 Aligned_cols=332 Identities=13% Similarity=0.090 Sum_probs=233.8
Q ss_pred HHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhcc
Q 010112 40 FCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSF 119 (518)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~ 119 (518)
...++.+|.+.+++ |++.++.+++.+++.+++.+++++.|+++||+|||+++..+.++..++.+.+ .++
T Consensus 17 ~~~~~~lp~l~~~~----------~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~ 85 (355)
T TIGR00896 17 TSVGPLLPQIRSAL----------GMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAP 85 (355)
T ss_pred ccCcccHHHHHHHh----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-Hhc
Confidence 45678999999999 9999999999999999999999999999999999999999999988888877 666
Q ss_pred CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 010112 120 GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPY 199 (518)
Q Consensus 120 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~ 199 (518)
+ ++.+++.|++.|++.+...+....++.|++| ++|+++.++...+.++|..+++.+++.+.+..+
T Consensus 86 ~------~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~-------- 150 (355)
T TIGR00896 86 G------TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSG-------- 150 (355)
T ss_pred c------HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--------
Confidence 6 7888999999999999888888889999996 689999999999999999999999888864322
Q ss_pred CCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhcc
Q 010112 200 SVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRD 279 (518)
Q Consensus 200 ~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (518)
.+||+.|...++..++... .++||.++. .+ ++ + +...
T Consensus 151 -------------~~w~~~f~~~~~~~~~~~~--~~~~~~~~~--~~-~~-~------------------------~~~~ 187 (355)
T TIGR00896 151 -------------GHWQQALAWWALPALLALL--AWIPQVRRR--VA-AN-Q------------------------TTTR 187 (355)
T ss_pred -------------hhHHHHHHHHHHHHHHHHH--HHhhhhccc--cC-CC-C------------------------CCCC
Confidence 2399998876655443322 234443221 00 00 0 0000
Q ss_pred CCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccc
Q 010112 280 SNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPG 359 (518)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (518)
...++.++++. .+......++....++....+.|.++++.|+++...+ .......++.+++
T Consensus 188 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~lp~~~~~~g~~~~~~g------------~~~~~~~~~~i~~ 248 (355)
T TIGR00896 188 LTPVRIWRSPL-------AWQVTVFFGLQSGLYYSLIGWLPAILISHGASAATAG------------SLLALMQLAQAAS 248 (355)
T ss_pred CCCchhhcCHh-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH------------HHHHHHHHHHHHH
Confidence 11122222221 2223333344455666677788988887777655422 2666677788899
Q ss_pred hhhhhhhhhhc-cChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeecccc-ccchhh
Q 010112 360 YWFTVAFIDYM-GRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAE-IFPARL 437 (518)
Q Consensus 360 ~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~ 437 (518)
+++.+++.||+ +||+.+..+..+.+++.+++..... . .... ..+..+.+.....+...+...+ ..+++.
T Consensus 249 ~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~--~~~l~g~~~g~~~~~~~~~~~~~~~~~~~ 319 (355)
T TIGR00896 249 ALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPM------H-GLWA--WALVLGLGQGGAFPLALTLIGLRSRQAAQ 319 (355)
T ss_pred HHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhh------h-HHHH--HHHHHHHhhhhHhHHHHHHHHHhccCHHH
Confidence 99999999999 4566666666666666655544331 1 1111 1222223333334444444443 345677
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhhhhcCC
Q 010112 438 RSTCHGISAAAGKAGAIVGAFGFLYAAQSKD 468 (518)
Q Consensus 438 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 468 (518)
++...++.+..++++..++|.+.|.+.|..+
T Consensus 320 ~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 320 AAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999997554
No 78
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.95 E-value=3e-26 Score=225.07 Aligned_cols=377 Identities=14% Similarity=0.063 Sum_probs=220.1
Q ss_pred HHhhhhhhhHHHHHHHhh-hhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHH
Q 010112 31 GFFTDAYDLFCISLVTKL-LGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMV 109 (518)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~ 109 (518)
..++.........+..|. +.+++ |++..+.|++.+.+.++..+++++.|+++||+|||++++++..+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~l~~~~----------g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~ 87 (420)
T PRK09528 18 FFFFFFFIWSSWFSFFPIWLHDIN----------GLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLL 87 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHH
Confidence 344444444444455444 45558 9999999999999999999999999999999999999988766665
Q ss_pred HHHHHhhh---ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 110 ISSIASGL---SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 110 i~~~~~~~---~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
++...... ++.. ....+...++++++.|.+.....+....+..+ . .++|++.++......++|..+++.+++.+
T Consensus 88 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l 164 (420)
T PRK09528 88 VLFGPFFIYVFAPLL-QYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGIL 164 (420)
T ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHH
Confidence 54432211 1110 00001222334444454433333333333322 2 34677888998899999999999999988
Q ss_pred HhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcC-CCCcchhhhhhccHHHHHHHHHHHHhhhc
Q 010112 187 SSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRM-PETARYTALVAKNAKQAAADMSKVLQVEL 265 (518)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~-~esp~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (518)
.+ .+|+..|++.++.+++..+..++. +|+++.. ..+++++ +
T Consensus 165 ~~------------------------~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~---------- 206 (420)
T PRK09528 165 FN------------------------INPQINFWLGSGSALILLVLLFFAKPDAPSTA--KVANALG--A---------- 206 (420)
T ss_pred Hh------------------------cCchHhHHHHHHHHHHHHHHHhcccccccchh--hhccchh--c----------
Confidence 63 249999998887776665555444 3332210 0000000 0
Q ss_pred chhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHh----cCCCCCcchhhhHHH
Q 010112 266 EAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAI----GWIPPAATMNAIHEV 341 (518)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~~~~~~~~~~~~~~ 341 (518)
+++..+.+ +..+.++++..+ . .....+.....+.....+.|.++.+. +.+...
T Consensus 207 ~~~~~~~~-------~~~~~l~~~~~~----~---l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 263 (420)
T PRK09528 207 NASAVSLK-------DALALLKLPKFW----F---LVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRV--------- 263 (420)
T ss_pred ccccccHH-------HHHHHccCCCeE----e---ehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHH---------
Confidence 00000000 011112222111 1 11111111122222222344444332 111111
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCc
Q 010112 342 YKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGP 421 (518)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (518)
.+ .......+...++.++++++.||+|+|+.+..+..+.++..+++.+.. +.+.......+.+..... .
T Consensus 264 --~g-~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~-------~~~~~~~~~~l~g~~~~~-~ 332 (420)
T PRK09528 264 --FG-YLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFAT-------GPLEVSILKLLHAFEVPF-L 332 (420)
T ss_pred --HH-HHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcc-------cHHHHHHHHHHHHHHHHH-H
Confidence 12 234444556667888999999999999998888888777776665543 223222222222222211 2
Q ss_pred cceeeeccccccchhhhhhHHHH-HHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 422 NATTFVVPAEIFPARLRSTCHGI-SAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
.+....+..|.+|++.+++..+. .++...+|.+++|.+.|++. |..||+..|.+.+++.++..++.
T Consensus 333 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~-------------~~~G~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 333 LVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLY-------------DSIGFQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHH-------------HhhCchHHHHHHHHHHHHHHHHH
Confidence 23344677788899999988766 57778899999999999998 45689999998888887776666
Q ss_pred h-hccc
Q 010112 501 L-CVPE 505 (518)
Q Consensus 501 ~-~~~~ 505 (518)
+ ..++
T Consensus 400 ~~~~~~ 405 (420)
T PRK09528 400 VFTLSG 405 (420)
T ss_pred HHHhcC
Confidence 5 4443
No 79
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.95 E-value=2.1e-25 Score=217.60 Aligned_cols=381 Identities=14% Similarity=0.055 Sum_probs=244.3
Q ss_pred HHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc-----chhh-HHHH
Q 010112 30 MGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL-----GRKK-VYGI 103 (518)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~-----Grr~-~~~~ 103 (518)
..++.+++........+|.+.++. |+|.+++|++..+... .+..+++|+++||+ |||| .+..
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~l~~~----------g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~ 73 (402)
T PRK11902 6 LLGFASGLPLALTSGTLQAWMTVE----------GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLL 73 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHH
Confidence 446677777788888899988888 9999999999777776 69999999999999 8876 6888
Q ss_pred HHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 010112 104 TLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVA 183 (518)
Q Consensus 104 ~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~ 183 (518)
+.++.+++..+.++.+.. ++++.+++..++.+++.+...++..+++.|++|++||+++.++...+..+|.++++.++
T Consensus 74 ~~~~~~l~~~~l~~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~ 150 (402)
T PRK11902 74 TQVGLAASIAAMAFCPPH---AALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLA 150 (402)
T ss_pred HHHHHHHHHHHHHhcCcc---chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHH
Confidence 888888888887777431 11677888888888888888999999999999999999999999999999999999998
Q ss_pred HHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhh
Q 010112 184 LIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQV 263 (518)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~ 263 (518)
..+.+. ..+||..|++.++..++..+..++.||+++.. ++++ +..+...
T Consensus 151 ~~l~~~----------------------~~gw~~~f~i~a~~~l~~~l~~~~~~e~~~~~--~~~~--~~~~~~~----- 199 (402)
T PRK11902 151 LWLADR----------------------VLGWGNTYLLMAGLMLAGALTTLWAPEPEVPA--RPPR--SLGEAVV----- 199 (402)
T ss_pred HHHHhc----------------------ccCHHHHHHHHHHHHHHHHHHHHhcCCCcccc--cccc--hhHHHHH-----
Confidence 888632 13599999998877766555555677764421 1000 0000000
Q ss_pred hcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHH
Q 010112 264 ELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYK 343 (518)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 343 (518)
+ +..+.++++.. +..+.............+ ....+.+.++.|+++.+
T Consensus 200 ------~----------~~~~l~~~~~~----~~~l~~~~l~~~~~~~~~--~~~~~~l~~~~G~~~~~----------- 246 (402)
T PRK11902 200 ------G----------PLRDFFSRRGA----WALLLLIVLYKLGDAFAG--SLSTTFLIRGAGFSAGE----------- 246 (402)
T ss_pred ------H----------HHHHHHhCcCH----HHHHHHHHHHHhHHHHHH--HHHHHHHHHhcCCCHHH-----------
Confidence 0 01111222211 111111111111111111 12233344446665543
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHH---HHHHHHhcC
Q 010112 344 IARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYS---LTFFFANFG 420 (518)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 420 (518)
.+........++.+++.++++++.||+++|+.+..+..+..+..+.+...... .++.+....... +..+.....
T Consensus 247 ~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~ 323 (402)
T PRK11902 247 VGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVT---PKHLWTMALAIGIENLCGGMGTAA 323 (402)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhc---CCcHHHHHHHHHHHHHHHHHHHHH
Confidence 22222233344577788899999999999998877666655544333211100 012222222211 122222222
Q ss_pred ccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 421 PNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 421 ~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
..+....++.+.+|.+.+ ++.+....++..+++.+.|.+. |..||+..|.+.+.+++++.++.
T Consensus 324 ~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~-------------~~~G~~~~f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 324 FVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLV-------------EAYGWPGFYLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHH-------------HHhChHHHHHHHHHHHHHHHHHH
Confidence 344555667777776544 4555556677776777889988 56789999999988888887777
Q ss_pred hhcccCCCC
Q 010112 501 LCVPESKGR 509 (518)
Q Consensus 501 ~~~~~~~~~ 509 (518)
...+.+-+|
T Consensus 387 ~~~~~~~~~ 395 (402)
T PRK11902 387 WLMRGTIGR 395 (402)
T ss_pred HHHhhhccc
Confidence 655554333
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.95 E-value=3.9e-25 Score=214.22 Aligned_cols=358 Identities=10% Similarity=0.020 Sum_probs=232.6
Q ss_pred HhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchh----hHHHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRK----KVYGITLIL 107 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr----~~~~~~~~l 107 (518)
++......+.+.|.+|.+.+++ +.|..+.|++.+++.++..++++++|+++||+||| +.+.+...+
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~~----------g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~ 82 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKGQ----------GYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLL 82 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHhc----------CCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHH
Confidence 4444555677788888888888 99999999999999999999999999999999984 333222222
Q ss_pred HHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 108 MVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
. ........++ ++.+++.|++.|++.+...|...+++.++ .++|+++.+......++|.++||++++++.
T Consensus 83 ~--~~~~~~~~~~------~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~ 152 (382)
T PRK11128 83 F--AVAFWFGAHS------FWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLV 152 (382)
T ss_pred H--HHHHHHhccc------HHHHHHHHHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 1 2222333455 78999999999999998899888888877 356888888889999999999999999998
Q ss_pred hhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcch
Q 010112 188 SAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEA 267 (518)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (518)
+..+ ||..|++.++..++..+..++.||+++. . ++ ++..
T Consensus 153 ~~~g-----------------------~~~~f~~~~~~~~~~~~~~~~~~~~~~~--~--~~-~~~~------------- 191 (382)
T PRK11128 153 SWFG-----------------------EQAILWILTAGVASMLLGQLLRPTIMPQ--G--ES-RQQE------------- 191 (382)
T ss_pred HHcC-----------------------hhHHHHHHHHHHHHHHHHHHccCCCCCc--c--cc-cccc-------------
Confidence 5544 9999988776554444444445553221 0 00 0000
Q ss_pred hhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHH
Q 010112 268 EEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARA 347 (518)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 347 (518)
++..++.++.++++ .++......++....+.....+.|.+.++.|+++... +.
T Consensus 192 --------~~~~~~~~~i~~~~-------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~g~s~~~~-----------g~- 244 (382)
T PRK11128 192 --------SAGWPAWKALLKEP-------TVWRFLLCVSLLQGSHAAYYGFSAIYWQAAGYSASTI-----------GY- 244 (382)
T ss_pred --------ccccchHHHHHcCh-------hHHHHHHHHHHHHHHhHhHHHHHHHHHHHCCCCHhHH-----------HH-
Confidence 00000112222222 2222233333333344444556667777766664432 22
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
......+..++..++.+++.||+++|+.+..+....+++.+++.... +.+...+...+.+..... ..+....
T Consensus 245 ~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~g~~~~~-~~~~~~~ 316 (382)
T PRK11128 245 LWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTT-------ALPWLIVIQILHCGTFTV-CHLAAMR 316 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 33355567777888999999999999999888888777766655433 223333333333332222 2344545
Q ss_pred ccccccchhhhhhHHHHHHHH-HHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 428 VPAEIFPARLRSTCHGISAAA-GKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
+..+. +++++++..++.+.. ..+|..++|.+.|.+.| ..|+ ..+...+++.+++.+..
T Consensus 317 ~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~-------------~~g~-~~~~~~~~~~~~~~~~~ 375 (382)
T PRK11128 317 YIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQ-------------HLGA-GVFWVMALVALPALFIR 375 (382)
T ss_pred HHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hccH-HHHHHHHHHHHHHHHHH
Confidence 66666 566678889988744 45788999999999985 4454 45666666666554433
No 81
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.95 E-value=2.5e-26 Score=233.08 Aligned_cols=404 Identities=15% Similarity=0.141 Sum_probs=260.5
Q ss_pred HHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHH
Q 010112 26 VIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITL 105 (518)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~ 105 (518)
+...+..+.........+..++.++++| +++..+.|++.+.+.++++++.++.|+++||+|||+++.++.
T Consensus 36 ~~~~~~~~~~~~~~g~~~~~l~~iek~F----------~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ 105 (633)
T TIGR00805 36 LLLTCAQLQGLLYNGLVNSSLTTIERRF----------KLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGC 105 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhhchhhhhhh----------CCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecH
Confidence 4444567777788889999999999999 999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhcc----CCc--------------------------------------h---hhHHHHHHHHHHHhhhc
Q 010112 106 ILMVISSIASGLSF----GKS--------------------------------------A---KGVIATLCFFRFWLGFG 140 (518)
Q Consensus 106 ~l~~i~~~~~~~~~----~~~--------------------------------------~---~~~~~~l~~~r~l~G~~ 140 (518)
++++++++++++.+ .|. . ...+..++++|+++|+|
T Consensus 106 ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG 185 (633)
T TIGR00805 106 AIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIG 185 (633)
T ss_pred HHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhcc
Confidence 99999999998763 000 0 00256788999999999
Q ss_pred cccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC--CCCCCCCCCCCCCCCCCC--cch
Q 010112 141 IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFK--APPYSVDPVGSTAPEADY--VWR 216 (518)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~wr 216 (518)
.+...+...+++.|++|+++|++++++++.+..+|.++|+++++++.+....... ..+..+++ .+..| +||
T Consensus 186 ~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~-----~dprWiGaWw 260 (633)
T TIGR00805 186 ATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTP-----TDPRWIGAWW 260 (633)
T ss_pred CCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCC-----CCccHHHHHH
Confidence 9999999999999999999999999999999999999999999998865431100 00001111 11122 388
Q ss_pred HHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHh-hhhhhccCCcccchhhhhhhhhh
Q 010112 217 IVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKV-AKLSQRDSNSFGLFSREFLKRHG 295 (518)
Q Consensus 217 ~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 295 (518)
..|++.+++.++..+.++++|++.+.. ..+.+.++.++.. .+...++...+. +..++..+..+.++++
T Consensus 261 l~Fli~g~l~~l~~v~l~~~p~~lp~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n------- 329 (633)
T TIGR00805 261 IGFLICGGVALLTSIPFFFFPKALPKE-GKRVNVDVHETEK---LEKSEDKSRKKNSDITKDFPKIIKRLLCN------- 329 (633)
T ss_pred HHHHHHHHHHHHHHHHHHhCccccCCc-ccccchhhhhhhc---ccccccccchhhhhhHHHHHHHHHHHHcC-------
Confidence 889888887777655555666543210 0000000000000 000000000000 0000000011112222
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccC--
Q 010112 296 LHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGR-- 372 (518)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-- 372 (518)
+.++...+..++....+++...+.|.++++ .|+++...+ .+.......+.++|.+++|+++||++.
T Consensus 330 ~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag-----------~l~~~~~i~~~~vG~~l~G~l~~r~~~~~ 398 (633)
T TIGR00805 330 PIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEAN-----------FLIGVVNLPAAGLGYLIGGFIMKKFKLNV 398 (633)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHH-----------HHhhhhhhhHHHHHHhhhhheeeeecccH
Confidence 234555555666667778888899999885 676655422 222222333556788899999999984
Q ss_pred hhHHHHHHHHHHHHHHHHhh---------------------------c-cc-------c---------------------
Q 010112 373 FAIQMMGFFFMTVFMFALAI---------------------------P-YH-------H--------------------- 396 (518)
Q Consensus 373 r~~~~~~~~~~~~~~~~~~~---------------------------~-~~-------~--------------------- 396 (518)
|+.+..+.++..++.++... . .. .
T Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AG 478 (633)
T TIGR00805 399 KKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAG 478 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccC
Confidence 56666666655555433210 0 00 0
Q ss_pred ------------ccC--------C---------C---c-hhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHH
Q 010112 397 ------------WTL--------K---------P---N-RIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHG 443 (518)
Q Consensus 397 ------------~~~--------~---------~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 443 (518)
+.. + . . ...++++..+..+.......|.. ..+-..+|+++|+.+.|
T Consensus 479 C~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~-~i~lR~V~~~~rs~alg 557 (633)
T TIGR00805 479 CSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFITAVPLY-MVLLRVVNPEEKSLAIG 557 (633)
T ss_pred CCCccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHhccCchh-eEEeeccCcccchHHhh
Confidence 000 0 0 0 11222333333333344444544 46667789999999999
Q ss_pred HHHHHHH-HHHHHHHhhhHhhhhcC
Q 010112 444 ISAAAGK-AGAIVGAFGFLYAAQSK 467 (518)
Q Consensus 444 ~~~~~~~-~g~~~~~~~~g~l~~~~ 467 (518)
+...+.+ +|.+-+|+++|++.|..
T Consensus 558 ~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 558 LQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred HHHHHHHHhcCCChhHHHhhhhhch
Confidence 9988877 78899999999999865
No 82
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.95 E-value=3.6e-25 Score=245.02 Aligned_cols=350 Identities=15% Similarity=0.012 Sum_probs=225.7
Q ss_pred hhHHHHHHHhhhhhhhcccCCCCCCCCC--CchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHh
Q 010112 38 DLFCISLVTKLLGRIYYHVDGAKKPGTL--PPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIAS 115 (518)
Q Consensus 38 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~--s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~ 115 (518)
+......+.+.+..++ +. +....+++.+++.+++.++++++|+++||+|||++++.+.++..++.++.
T Consensus 25 ~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~ 94 (1146)
T PRK08633 25 DLGHKILIQNTLIKAY----------DGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLI 94 (1146)
T ss_pred HHHHHHHHHHHHHHHc----------CcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 3344445555555555 44 34567999999999999999999999999999999999987766666554
Q ss_pred hh---ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 010112 116 GL---SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDH 192 (518)
Q Consensus 116 ~~---~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~ 192 (518)
.+ +.+ ++.++++|+++|++.+...++..+++.|++|+++|++++++...+..+|.++|+.+++++......
T Consensus 95 ~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~ 168 (1146)
T PRK08633 95 VLAYYLGW------FWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNG 168 (1146)
T ss_pred HHHHHHcc------HHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 43 455 799999999999999999999999999999999999999999999999999999999998754210
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcchHHHHhhhH-HHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhH
Q 010112 193 HFKAPPYSVDPVGSTAPEADYVWRIVLMVGAL-PAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDK 271 (518)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~-~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (518)
.. .....+|++.+.+.++ ..++.++..+.+||+|+... .+..++.... ..+
T Consensus 169 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~------------~~~ 220 (1146)
T PRK08633 169 NT--------------PSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAP--EVFDKKKYLF------------PKL 220 (1146)
T ss_pred cc--------------ccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCc--cccccccccc------------HHH
Confidence 00 0001124444444333 33334444556788765421 1100000000 000
Q ss_pred hhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCC-CcchhhhHHHHHHHHHHH
Q 010112 272 VAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPP-AATMNAIHEVYKIARAQT 349 (518)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~ 349 (518)
.. .....+++++ .++...+..++.....+....+.|.++.+ .|+++. . .....
T Consensus 221 ~~------~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~------------~g~~~ 275 (1146)
T PRK08633 221 LW------RNLKLLRSDR-------VLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQ------------VQYLL 275 (1146)
T ss_pred HH------HHHHHHhcCc-------HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHH------------HHHHH
Confidence 00 0001111111 11212222222222333344455656544 566544 2 22356
Q ss_pred HHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeecc
Q 010112 350 LIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVP 429 (518)
Q Consensus 350 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (518)
....++.+++.++++++.||+++++.+.++.++.+++.+++.... +.+..++...+.+.+... ..+...+++
T Consensus 276 ~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~-~~~~~~~~~ 347 (1146)
T PRK08633 276 AASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAP-------SLASVLVLFFLFGFSAGL-FIVPLNALI 347 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHHHH-hhHHHHHHH
Confidence 666778888999999999999999888887777777666655433 222222333333322222 344566788
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhh
Q 010112 430 AEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAA 464 (518)
Q Consensus 430 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 464 (518)
.+..|++.||+++|+.+++.+++.++++.+.+.+.
T Consensus 348 ~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 348 QFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred hhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999988888777665
No 83
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.95 E-value=9.5e-25 Score=215.78 Aligned_cols=421 Identities=10% Similarity=0.038 Sum_probs=243.9
Q ss_pred HHHHHHhhhhhhhHHHH-HHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhh-cchhhHHHHH
Q 010112 27 IAGMGFFTDAYDLFCIS-LVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDK-LGRKKVYGIT 104 (518)
Q Consensus 27 ~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr-~Grr~~~~~~ 104 (518)
.+++..+...+..+... .+...+.+++ |++.++.+++.+.+.....+..+++|+++|| +||||+++.+
T Consensus 18 ~~~~~~~~er~~~y~~~~~l~~yl~~~l----------g~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g 87 (489)
T PRK10207 18 MIFFVELWERFGYYGVQGILAVFFVKQL----------GFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLG 87 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHH
Confidence 33344444444444443 4445566778 9999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccc--cchhHHHHHHHHHHHHHHHHHHH
Q 010112 105 LILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKK--TRGAFIAAVFAMQGFGILAGGIV 182 (518)
Q Consensus 105 ~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~--~rg~~~~~~~~~~~lG~~lg~~l 182 (518)
.+++++++++++++.+. ...++++|+++|+|.|...|...+++.|.+|++ +|+++.++++.+.++|.++||.+
T Consensus 88 ~~~~~~g~~~~~~~~~~-----~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l 162 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLK-----PDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSL 162 (489)
T ss_pred HHHHHHHHHHHHHhccc-----hhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHH
Confidence 99999999999998762 234558999999999999999999999999877 45789999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhh-hhhccHHHHHHHHH---
Q 010112 183 ALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTA-LVAKNAKQAAADMS--- 258 (518)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~-~~~~~~~~~~~~~~--- 258 (518)
++++.+.. |||+.|++.++..++.++.....++..+... ..++++.+......
T Consensus 163 ~g~l~~~~-----------------------gw~~~F~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~ 219 (489)
T PRK10207 163 APVIADKF-----------------------GYSVTYNLCGAGLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLL 219 (489)
T ss_pred HHHHHHhh-----------------------ChHHHHHHHHHHHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHH
Confidence 99998544 4999999865533333333333332211100 00000011101000
Q ss_pred ----HHHh----hhcchhhhHh-hh--------hhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHH
Q 010112 259 ----KVLQ----VELEAEEDKV-AK--------LSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKD 321 (518)
Q Consensus 259 ----~~~~----~~~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (518)
-... .+........ .. ...++.+..+.++++.. ....+..........+.......+.
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~-----~~~~l~~~~~~f~~~~~q~~~~l~l 294 (489)
T PRK10207 220 GSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMF-----VAFVLMLEAVVFYILYAQMPTSLNF 294 (489)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHH-----HHHHHHHHHHHHHHHHHHcccHHHH
Confidence 0000 0000000000 00 00000000111222111 1111111122222233333344455
Q ss_pred HHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhH-------HHHHHHHHHHHHHHHhhc
Q 010112 322 IFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAI-------QMMGFFFMTVFMFALAIP 393 (518)
Q Consensus 322 ~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-------~~~~~~~~~~~~~~~~~~ 393 (518)
+.++ .+. ...+.... .+. ......+..++..++.+++.||+++|+. +..|.++.+++++.+...
T Consensus 295 ~~~~~~~~--~~~G~~i~-----~~~-~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~ 366 (489)
T PRK10207 295 FAINNVHH--EILGFSIN-----PVS-FQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAA 366 (489)
T ss_pred HHHHhccc--cccceEEC-----HHH-HHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 5442 221 11111100 111 2222223344556677899999998873 667777777666543211
Q ss_pred cc-cc-cCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCc
Q 010112 394 YH-HW-TLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTK 471 (518)
Q Consensus 394 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~ 471 (518)
.. .. ........+++...+..+.+.....|.....+.+..|++.++.++|+.+...++|+.++..+......... .
T Consensus 367 ~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~~~~~~--~ 444 (489)
T PRK10207 367 GMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFTAVPDN--I 444 (489)
T ss_pred HHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc--c
Confidence 10 00 11112233334444444555555677778888889999999999999999999999999888765531110 0
Q ss_pred CCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 472 RDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 472 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
.++.. +.-.+...|...++..+++.+..+
T Consensus 445 ~~~~~-~~~~~~~~f~~~~~~~~~~~v~~~ 473 (489)
T PRK10207 445 TDPLE-TLPVYTNVFGKIGLVTLGVAVVMA 473 (489)
T ss_pred ccchh-hhhhHHHHHHHHHHHHHHHHHHHH
Confidence 00000 011255667777777766666555
No 84
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.1e-26 Score=227.27 Aligned_cols=410 Identities=12% Similarity=0.108 Sum_probs=293.7
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 010112 17 TQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG 96 (518)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G 96 (518)
..-|-|.+++..++......-....++...+.+++++ +.+..+.+|+.++......+..|+.+.+.||+|
T Consensus 40 dGG~gWvV~~a~fl~~~~~~g~~~~~Gv~~~~~~~~f----------~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg 109 (509)
T KOG2504|consen 40 DGGWGWVVVFASFLVNLSTDGLINSFGLLFEELMDYF----------GSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFG 109 (509)
T ss_pred CCCeeeeeeHhHHHHHHhhhcchheehhhHHHHHHHh----------CCCccHHHHHHHHHHHHHHHhccHHHHHHhhcC
Confidence 4557788887777777665555667778899999999 899999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHH-HHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHH
Q 010112 97 RKKVYGITLILMVISSIASGLSFGKSAKGVIATLC-FFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (518)
Q Consensus 97 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~-~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG 175 (518)
.|.+.+.|.++.+++.++.+++++ ++.++ ..-++.|+|.|+.+......+..||+ |+|+.+.|+...+.++|
T Consensus 110 ~R~v~i~G~~v~~~g~~lssF~~~------i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~-kkR~lA~Gia~~GsG~G 182 (509)
T KOG2504|consen 110 CRTVMIAGGLVAALGLLLSSFATS------LWQLYLTFGVIGGLGLGLIYLPAVVILGTYFE-KKRALATGIAVSGTGVG 182 (509)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHhhccchhhhcchhhhhhhHhH-HHHHHHHhhhhccCCcc
Confidence 999999999999999999999999 56554 46799999999999999999998887 78999999999999999
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH-hcCCCCcchhhhhhccHHHHH
Q 010112 176 ILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR-MRMPETARYTALVAKNAKQAA 254 (518)
Q Consensus 176 ~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~ 254 (518)
..+-|.+...+.+..+ ||+.+++.+.+.+-.++.. ...|.+++.. +. .++..
T Consensus 183 ~~~~~~l~~~l~~~~G-----------------------~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~--~~--~~~~~ 235 (509)
T KOG2504|consen 183 TVVFPPLLKYLLSKYG-----------------------WRGALLIFGGISLNVLVAGALLRPLSPPKK--PN--EEKDL 235 (509)
T ss_pred eeeHHHHHHHHHHHhC-----------------------cHHHHHHHHHHHHHHHHHHHHcCCCCcCCC--ch--hhhhh
Confidence 9999999999885544 9999999877776555443 3344343321 11 00000
Q ss_pred HHHHHHHh-------hhc---ch--------hhhHhhhhhhccC--Ccccch---hhhhhhhhhhHHHHHHHHHHHHHHH
Q 010112 255 ADMSKVLQ-------VEL---EA--------EEDKVAKLSQRDS--NSFGLF---SREFLKRHGLHLFGTTSTWFLLDIA 311 (518)
Q Consensus 255 ~~~~~~~~-------~~~---~~--------~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (518)
+...+... .+. .. +.++.++.+++.. .....+ ....++. +.++.......+....
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~--~~fl~~~~~~~~~~~g 313 (509)
T KOG2504|consen 236 RNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKD--PKFLLLALSNLFAYLG 313 (509)
T ss_pred ccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcC--chHHHHHHHHHHHHHH
Confidence 00000000 000 00 0000000000000 111111 1233333 3445555666666778
Q ss_pred HHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccC--hhHHHHHHHHHHHHHHH
Q 010112 312 FYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGR--FAIQMMGFFFMTVFMFA 389 (518)
Q Consensus 312 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~--r~~~~~~~~~~~~~~~~ 389 (518)
++...+++|.+..+.+++..+... .....++..++++++.|++.|+... +....++.+..+++.+.
T Consensus 314 ~~~p~~~l~~~~~~~g~~~~~aa~------------l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~ 381 (509)
T KOG2504|consen 314 FNVPFVYLPSYAKSLGLSSNDAAF------------LLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLF 381 (509)
T ss_pred HHHHHHHHHHHHhhcCCChhhhHH------------HHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHH
Confidence 888899999999988887776333 7777888999999999999999884 44444555555555544
Q ss_pred HhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 010112 390 LAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP 469 (518)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 469 (518)
+.... + ...+..+++..++............+.|+.+.++-..+.|+...+..++..++|++.|++.|.++
T Consensus 382 ~p~~~-------~-~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg- 452 (509)
T KOG2504|consen 382 LPFAT-------T-YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG- 452 (509)
T ss_pred HHHhc-------c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC-
Confidence 44433 2 33444444444444444455555688899999999999999999999999999999999987555
Q ss_pred CcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcc
Q 010112 470 TKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVP 504 (518)
Q Consensus 470 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (518)
+|...|...+++.+++..+.+..+
T Consensus 453 -----------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 453 -----------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred -----------CeeeehhhcChHHHHHHHHHHHhH
Confidence 588999999999999987777555
No 85
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.94 E-value=5.2e-25 Score=242.64 Aligned_cols=326 Identities=13% Similarity=-0.014 Sum_probs=216.1
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHH---HHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccc
Q 010112 68 NVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGI---TLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGD 144 (518)
Q Consensus 68 ~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~---~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 144 (518)
...++..+++.+.++++++++|+++||+|||+++.. ..++..+..+.....++ ++.++++|+++|++.+..
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s------~~~l~~~~~l~gi~~a~~ 125 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNS------VPLLFAALFLMGIHSALF 125 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHhh
Confidence 467889999999999999999999999999997533 22222333333333456 799999999999999999
Q ss_pred cchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhH
Q 010112 145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGAL 224 (518)
Q Consensus 145 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~ 224 (518)
.|+..+++.|++|+++|++++|+.+++.++|.++||.+++++....+ |++.|+..++
T Consensus 126 ~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~-----------------------~~~~~~~~~~ 182 (1140)
T PRK06814 126 GPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGN-----------------------FVILVALLMG 182 (1140)
T ss_pred chHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccc-----------------------cHHHHHHHHH
Confidence 99999999999999999999999999999999999999999985444 9999966555
Q ss_pred HHHHHHHHHhcCCCCcchhhhhhccHH-HHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHH
Q 010112 225 PAALTYYWRMRMPETARYTALVAKNAK-QAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTS 303 (518)
Q Consensus 225 ~~~~~~~~~~~~~esp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (518)
..++.++..+++|+++... ...+.+ ...+.... ..+...++ +.++...+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~---------------------~~~~~~~~-------~~~~~~~~ 232 (1140)
T PRK06814 183 IAVLGWLASLFIPKTGNAA--PDLKIDRNIIRSTIT---------------------LLKYAKAD-------KRIWLAIL 232 (1140)
T ss_pred HHHHHHHHHhhCCCCCCCC--CCCeeccchHHHHHH---------------------HHHHHhcC-------chHHHHHH
Confidence 5555555566677654321 100000 00000000 00001111 12233333
Q ss_pred HHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHH
Q 010112 304 TWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFF 382 (518)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 382 (518)
..+...........+.|.++.+ .|.++.. .........++.++|.++.+++.|+..+++.+..+.++
T Consensus 233 ~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~------------~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~ 300 (1140)
T PRK06814 233 GISWFWLVGAVVLSQLPLLAKETLGGDENV------------ATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALL 300 (1140)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHcCCchHH------------HHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHH
Confidence 3333334444555677877765 4555443 22366677778888999999999888777666555555
Q ss_pred HHHHHHHHhhcccc--c-----------cCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHH
Q 010112 383 MTVFMFALAIPYHH--W-----------TLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAG 449 (518)
Q Consensus 383 ~~~~~~~~~~~~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~ 449 (518)
.+++.+.+.+.... . ....+.+...+..++.+ ++.....+...+++.+..|++.+|+++|+.++..
T Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~ 379 (1140)
T PRK06814 301 MGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLA-AAGGLYIVPLFAALQAWANPAHRARVIAANNVLN 379 (1140)
T ss_pred HHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHH-HHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHH
Confidence 55544433332000 0 00012222222223333 3333344456788899999999999999999999
Q ss_pred HHHHHHHHhhhHhhhh
Q 010112 450 KAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 450 ~~g~~~~~~~~g~l~~ 465 (518)
.++..+++.+.+.+.+
T Consensus 380 ~~~~~ig~~~~g~l~~ 395 (1140)
T PRK06814 380 AAFMVAGTIILALLQA 395 (1140)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999874
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.94 E-value=5.4e-25 Score=211.54 Aligned_cols=340 Identities=10% Similarity=0.020 Sum_probs=225.9
Q ss_pred HHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc-----chhhH-HHHHHHHHHHHHH
Q 010112 40 FCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL-----GRKKV-YGITLILMVISSI 113 (518)
Q Consensus 40 ~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~-----Grr~~-~~~~~~l~~i~~~ 113 (518)
...++..|.+.+|+ |+|.++.|+.... .+...+ .+++|+++||+ ||||. ++.+.++.++...
T Consensus 5 ~~~~~~~~~~~~~~----------g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~ 72 (356)
T TIGR00901 5 GLVGNTLPYWLRSK----------NVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLL 72 (356)
T ss_pred hhHHhHHHHHHHHc----------CCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHH
Confidence 45678889999999 9999999999755 555555 99999999998 89987 5677888888877
Q ss_pred HhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 010112 114 ASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHH 193 (518)
Q Consensus 114 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~ 193 (518)
..++.++.. .++.+....++.+++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+....+..
T Consensus 73 ~l~~~~~~~---~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~ 149 (356)
T TIGR00901 73 ILSFLVPST---DLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFAN 149 (356)
T ss_pred HHHcCCcch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 777775421 15677788888898888888999999999999999999999999999999999999998887554410
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHh-cCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHh
Q 010112 194 FKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRM-RMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKV 272 (518)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (518)
...+++||..|++.++..++..+..+ ..||+++. ++.++++ .+... +
T Consensus 150 ---------------~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~---~~~~~~~-~~~~~-----------~-- 197 (356)
T TIGR00901 150 ---------------TGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED---ASVPKPL-TQAVL-----------K-- 197 (356)
T ss_pred ---------------cccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc---cccchhH-HHHHH-----------H--
Confidence 12356799999998887776655544 35664321 0000000 00000 0
Q ss_pred hhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHH
Q 010112 273 AKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIA 352 (518)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (518)
..++.++++.. +..+...+..++....++....+.|.++.+.|+++.+ .+.......
T Consensus 198 --------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~-----------~g~~~~~~~ 254 (356)
T TIGR00901 198 --------PIREFFQRKNM----IQALLLLLLIVLYKLGDSAATVLTTLFLLDMGFSKEE-----------IALVAKING 254 (356)
T ss_pred --------HHHHHHHhcCc----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH-----------HHHHhHHHH
Confidence 00111111111 1233333334444556666677788887777766554 222233334
Q ss_pred HhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccC----CCchhHHHHHHHHHHHHHhcCccceeeec
Q 010112 353 LCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTL----KPNRIGFVIMYSLTFFFANFGPNATTFVV 428 (518)
Q Consensus 353 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 428 (518)
.+..+++.++++++.||+|||+.+..+.++.++...++.+....... .++.+ .+....+...+......+...++
T Consensus 255 ~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~ 333 (356)
T TIGR00901 255 LLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLL-MLFLTITLEAVTGGLGTVAFVAF 333 (356)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHH-HHHHHHHHHHHHhHHHHHHHHHH
Confidence 45667788899999999999999888887777666554432110000 01112 22222222233323345677789
Q ss_pred cccccchhhhhhHHHHHHHHHH
Q 010112 429 PAEIFPARLRSTCHGISAAAGK 450 (518)
Q Consensus 429 ~~~~~p~~~~~~~~g~~~~~~~ 450 (518)
..|.+|+++||+.+|+.+...+
T Consensus 334 ~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 334 LSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHhcCCCccHHHHHHHHHHHh
Confidence 9999999999999999887654
No 87
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=5.3e-24 Score=210.59 Aligned_cols=407 Identities=9% Similarity=0.035 Sum_probs=245.0
Q ss_pred HHHHHHhhhhhhhHHHHHHHhhh-hhh--hcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhh-cchhhHHH
Q 010112 27 IAGMGFFTDAYDLFCISLVTKLL-GRI--YYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDK-LGRKKVYG 102 (518)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i-~~~--~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr-~Grr~~~~ 102 (518)
.+.+..+.+.+..+...+.+|.. .++ + |++..+.+++.+.+.++..++++++|+++|| +|||+++.
T Consensus 14 ~l~~~~~~~~~~~~~~~~~L~~yl~~~~~l----------g~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~ 83 (475)
T TIGR00924 14 TLFFVELWERFSYYGMQGILAVYLVQQAGL----------GFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMV 83 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCC----------CCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHH
Confidence 33344555555555555656554 344 6 9999999999999999999999999999999 89999999
Q ss_pred HHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhccccc---chhHHHHHHHHHHHHHHHH
Q 010112 103 ITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKT---RGAFIAAVFAMQGFGILAG 179 (518)
Q Consensus 103 ~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~---rg~~~~~~~~~~~lG~~lg 179 (518)
++.++.+++.++.+++++ ++.++++|++.|++.|...+...++++|++|+++ |+++.++.+.+.++|.++|
T Consensus 84 ~~~~~~~~g~~~~~~~~~------~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig 157 (475)
T TIGR00924 84 LGGIVLMLGHFMLAMSIY------PDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFIS 157 (475)
T ss_pred HHHHHHHHHHHHHHhccc------HhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHH
Confidence 999999999999999887 6888899999999999999999999999998764 8889999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCC----CCcchhhhhhccHHHHH-
Q 010112 180 GIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMP----ETARYTALVAKNAKQAA- 254 (518)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~----esp~~~~~~~~~~~~~~- 254 (518)
+.+++++.+. .+||+.|.+.++..++..+...+.+ +.|+. .++.++++..
T Consensus 158 ~~l~g~l~~~-----------------------~g~~~~f~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~ 212 (475)
T TIGR00924 158 PLLAGVIAEN-----------------------YGYHVGFNLAAVGMVIGLLTFFAGRHMLRDIGSV--PDPLSGQGKTY 212 (475)
T ss_pred HHHHHHHHHh-----------------------cChHHHHHHHHHHHHHHHHHHHHcccccccCCCC--CCCcchhhhhh
Confidence 9999998743 3499999987765554443333322 22211 0000111100
Q ss_pred -HHHHH------------HHhhhcchhhh-----------HhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHH
Q 010112 255 -ADMSK------------VLQVELEAEED-----------KVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDI 310 (518)
Q Consensus 255 -~~~~~------------~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (518)
+.... ....+....+. ...+...++ .......++ ...++.+.........
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~~~~l~l~~~~~~~~~ 286 (475)
T TIGR00924 213 GKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKP-----RLDAVARNK-MYAYIVLFLEAVVFWV 286 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhc-----cCCHHHHhH-HHHHHHHHHHHHHHHH
Confidence 00000 00000000000 000000000 000111111 1112222222222222
Q ss_pred HHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhh----hhhhhh-ccChhHH--HHHHHH
Q 010112 311 AFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFT----VAFIDY-MGRFAIQ--MMGFFF 382 (518)
Q Consensus 311 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~l~dr-~g~r~~~--~~~~~~ 382 (518)
.+.-.....+.+.++ .+.+...... ..+. ......+..++..++. .++.|| .+.+... .+|.++
T Consensus 287 ~~~Q~~s~l~l~~~~~~~~~~~~~~i-------p~~~-~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l 358 (475)
T TIGR00924 287 LYAQMPTSLNFFADNNMHHEMLGMSV-------PVIW-FQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLF 358 (475)
T ss_pred HHHHhhhHHHHHHHHhccccccceEE-------CHHH-HHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHH
Confidence 322222333333333 2211111110 0111 2222233333333332 234443 2223333 667777
Q ss_pred HHHHHHHHhhcccccc-CCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhH
Q 010112 383 MTVFMFALAIPYHHWT-LKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFL 461 (518)
Q Consensus 383 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 461 (518)
.+++++.+.+...... .......+.+...+....+.....|...++..+..|++.||+++|+......+|..+++.+..
T Consensus 359 ~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~ 438 (475)
T TIGR00924 359 CGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLAT 438 (475)
T ss_pred HHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777766654311111 011234445555556666777778899999999999999999999999999999999998888
Q ss_pred hhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 462 YAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 462 ~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
...+ ..++...|...++.+++..+..+
T Consensus 439 ~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~ 465 (475)
T TIGR00924 439 FGAV-------------PQGVTGVFGKIGLVTLLVGVVMA 465 (475)
T ss_pred HHhc-------------ccchhhHHHHHHHHHHHHHHHHH
Confidence 7652 33566677777777666666555
No 88
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.94 E-value=3.3e-24 Score=211.03 Aligned_cols=376 Identities=13% Similarity=0.057 Sum_probs=256.9
Q ss_pred HHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHH
Q 010112 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLIL 107 (518)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l 107 (518)
.+.+.++..++........+-+..+. .-|+...+++..+..+...+.++++|.++||++|||+++.+.++
T Consensus 15 lw~a~~iS~lG~~~~~va~~wlv~~l----------t~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~ 84 (524)
T PF05977_consen 15 LWIAQLISNLGDWMQTVALAWLVTQL----------TGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLL 84 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----------hCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHH
Confidence 33444455555555566666666666 77899999999999999999999999999999999999999988
Q ss_pred HHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 108 MVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
.++..+..++....+. -+.+.+++.-++.|++.+...|+..+++.|..|+++...+.++.+...++..++||.+++.+.
T Consensus 85 ~~~~~~~L~~l~~~~~-~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lv 163 (524)
T PF05977_consen 85 RALVALLLAVLAFFGL-LSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILV 163 (524)
T ss_pred HHHHHHHHHHHHHhCc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 7766555443211000 116889999999999999999999999999999999999999999999999999999999998
Q ss_pred hhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcch
Q 010112 188 SAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEA 267 (518)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (518)
...+ -.+.|++.++..++.++.....+.+++. ++..++.-.+.+
T Consensus 164 a~~G-----------------------~~~~f~inalsfl~~i~~l~~~~~~~~~---~~~~~e~~~~~l---------- 207 (524)
T PF05977_consen 164 AFFG-----------------------AAAAFLINALSFLISILALLRWKPPPPP---SSLPRERFFSAL---------- 207 (524)
T ss_pred HHHH-----------------------HHHHHHHHHHHHHHHHHHHHHccccccc---cccchhhhhhhH----------
Confidence 7666 4577877766555544433333322211 000111000000
Q ss_pred hhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHH
Q 010112 268 EEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIAR 346 (518)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~ 346 (518)
++-++.....+..+..+.....+. .........+|.+.++ .+.++...+
T Consensus 208 ---------------~~G~ryv~~~~~l~~~l~~~~~~~---l~~~a~~aLlPl~a~~~l~~~a~~yG------------ 257 (524)
T PF05977_consen 208 ---------------REGLRYVRSSPPLRSVLLRSFLFN---LFASAVWALLPLFARDVLGGGASGYG------------ 257 (524)
T ss_pred ---------------HHHHHHHhcchHHHHHHHHHHHHH---HhhhHHHHhhhHHHHHHhCCcHHHHH------------
Confidence 000111111111111222222222 2222233456776654 444444322
Q ss_pred HHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceee
Q 010112 347 AQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTF 426 (518)
Q Consensus 347 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (518)
+.....++|.++|.++.+++.+|+++++.+..+.++.+++.+.+++.. +.+.......+.+ ...........
T Consensus 258 ll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~-------~~~~~~~~l~l~G-~~~~~~~~~~~ 329 (524)
T PF05977_consen 258 LLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP-------SFWLALIALFLAG-AAWIIANSSLN 329 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch-------HHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 267778889999999999999999999988888888888777776655 2233333333333 33333444556
Q ss_pred eccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 427 VVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 427 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
+...+..|++.||++++++.+....+..+|..+.|.+.+ ..|....+.+.++..+++.++..
T Consensus 330 t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~-------------~~g~~~al~~a~~~lll~~~~~~ 391 (524)
T PF05977_consen 330 TLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLAD-------------HFGVRTALLIAGAALLLSALIAL 391 (524)
T ss_pred HHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhCHHHHHHHHHHHHHHHHHHHH
Confidence 778899999999999999999999999999999999984 56777788877777666666655
No 89
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.94 E-value=1.2e-24 Score=212.13 Aligned_cols=381 Identities=14% Similarity=0.054 Sum_probs=232.0
Q ss_pred HHHHHHhhhhhhhHHHHHHHhhh-hhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHH
Q 010112 27 IAGMGFFTDAYDLFCISLVTKLL-GRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITL 105 (518)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~ 105 (518)
.+....++.......+.+..|.. .+++ |.+..+.|++.+++.++..+++++.|+++||+|||+.++.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~ 75 (396)
T TIGR00882 6 MFGLFFFLYFFIMSAYFPFFPIWLHDVN----------GLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWII 75 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 33344555556666666666654 5567 999999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHhh---hccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 010112 106 ILMVISSIASG---LSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIV 182 (518)
Q Consensus 106 ~l~~i~~~~~~---~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l 182 (518)
...+++..... +.+.. ....+..+++.|++.|++.+...+....+..|..+ ++++..+......++|.++++.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~ 152 (396)
T TIGR00882 76 SGLLVLFAPFFIYVFGPLL-QSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASI 152 (396)
T ss_pred HHHHHHHHHHHHHHhhhHH-HHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHH
Confidence 76665444321 21110 00113456778899999988888888888777543 34566777778888999999999
Q ss_pred HHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhc-CCCCcchhhhhhccHHHHHHHHHHHH
Q 010112 183 ALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMR-MPETARYTALVAKNAKQAAADMSKVL 261 (518)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~-~~esp~~~~~~~~~~~~~~~~~~~~~ 261 (518)
++.+. +.+||.+|++.++..++..+..+. .||+|+.. ++ +++.
T Consensus 153 ~g~l~------------------------~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~------- 196 (396)
T TIGR00882 153 AGILF------------------------SIDPQIVFWLGSGFALILMLLLMFAKPKAPSSA----TV-ANAL------- 196 (396)
T ss_pred Hhhhh------------------------ccCchHHHHHHHHHHHHHHHHHHHhCCCCchhh----hh-hccc-------
Confidence 88775 235999999988777765544433 44433210 00 0000
Q ss_pred hhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHH
Q 010112 262 QVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEV 341 (518)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 341 (518)
+ + +++ +.+.++.++.++++. ++......+.....+.....+.+.++.+..... ..+ .
T Consensus 197 ~-~-~~~-------~~~~~~~~~~l~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~------~ 253 (396)
T TIGR00882 197 G-A-NAS-------AFSLKLALELFRQRK-------FWMFVLYVVGVACVYDVFDQQFANFFTSFFATP-QQG------T 253 (396)
T ss_pred c-c-ccC-------CCCHHHHHHHHcCCc-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-ccc------h
Confidence 0 0 000 000001112222221 111222222222333333334555555422111 000 0
Q ss_pred HHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCc
Q 010112 342 YKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGP 421 (518)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (518)
. ..........+...++.+..+++.||+|+|+.+..+..+.++...+..... +.+.......+ .+......
T Consensus 254 ~-~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~-------~~~~~~~~~~l-~g~~~~~~ 324 (396)
T TIGR00882 254 R-VFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFAT-------TALEVVILKML-HAFEVPFL 324 (396)
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcC-------ChHHHHHHHHH-HHHHHHHH
Confidence 0 111234444556666778889999999999999888887777666544432 22222222222 22221111
Q ss_pred cceeeeccccccchhhhhhHHHH-HHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 422 NATTFVVPAEIFPARLRSTCHGI-SAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~-~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
......+..+..|++.++++.+. .+....+|+.++|.+.|++. |..||+.+|.+.+++.++..+..
T Consensus 325 ~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~-------------~~~G~~~~f~~~~~~~~i~~~~~ 391 (396)
T TIGR00882 325 LVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMY-------------DSIGFQGAYLVLGCIVLLFTLIS 391 (396)
T ss_pred HHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHH-------------HhcccHHHHHHHHHHHHHHHHHH
Confidence 22233455666788888887766 57788999999999999998 45688999999888887776654
Q ss_pred h
Q 010112 501 L 501 (518)
Q Consensus 501 ~ 501 (518)
.
T Consensus 392 ~ 392 (396)
T TIGR00882 392 V 392 (396)
T ss_pred H
Confidence 3
No 90
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=1.2e-24 Score=204.12 Aligned_cols=181 Identities=11% Similarity=0.084 Sum_probs=153.5
Q ss_pred hHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchh-hHHHHHHHHHHHHhhhhhhhhhhhhcch
Q 010112 19 LYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNV-SAAVNGVALCGTLAGQLFFGWLGDKLGR 97 (518)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~lg~~i~~~~~G~l~dr~Gr 97 (518)
.+++..+++|..+++.. .+...+.+.|.+.+++ |+++++ .|.+.++++.++++++++.|+++||+|.
T Consensus 24 ~W~~~~~~lC~fGF~~e--~R~n~s~a~p~L~~el----------glT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~ 91 (511)
T TIGR00806 24 SWRVLVLYLCFYGFMAQ--FRPGESFITPYLLTVL----------NFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRY 91 (511)
T ss_pred chhHHHHHHHHHHHHHH--hhchHHHHHHHHHHHc----------CCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 34444555555555443 4788889999999999 999999 9999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHH
Q 010112 98 KKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (518)
Q Consensus 98 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~ 177 (518)
|+++.++.+.+++.+++.+++++ +..+.+.|++.|+++|... +...++.+|+|+++|+++.++..++..+|.+
T Consensus 92 K~vL~l~~l~Wsl~t~L~~fa~S------l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~ 164 (511)
T TIGR00806 92 KPVLVLQALSFVCVWLLLLLGTS------VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVF 164 (511)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988 8999999999999999999 9999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh---hHHHHHHHHHHhcCCCCcch
Q 010112 178 AGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG---ALPAALTYYWRMRMPETARY 242 (518)
Q Consensus 178 lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~---~~~~~~~~~~~~~~~esp~~ 242 (518)
++++++.++. .++||..+.+. .....+++++.+++|..++.
T Consensus 165 Ia~~L~qll~------------------------s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~s 208 (511)
T TIGR00806 165 LSSVLGQLLV------------------------TLGWISYSTLNIISLVFMTFSVFLALFLKRPKRS 208 (511)
T ss_pred HHHHHHHHHH------------------------hcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchh
Confidence 9999999843 23488765543 22333455667788855543
No 91
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.94 E-value=5.3e-24 Score=189.73 Aligned_cols=369 Identities=14% Similarity=0.110 Sum_probs=277.6
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHH
Q 010112 23 TAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYG 102 (518)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~ 102 (518)
..+..+.+..+.-=-....++|+++.+.+++ |+|.+..|+++++..+...+.+++..+++.|+|.++.+.
T Consensus 12 ~li~gIvlia~NLR~~itsvgPLL~~Ir~~~----------gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~ 81 (395)
T COG2807 12 LLLAGIVLIAFNLRPAITSVGPLLDEIRQDL----------GLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLF 81 (395)
T ss_pred HHHHHHHHHHhccchhhhhhhhhHHHHHHHh----------cccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHH
Confidence 3333333333433445577899999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 010112 103 ITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIV 182 (518)
Q Consensus 103 ~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l 182 (518)
.++++.+++.++-.... .+.++.+-.+.|+|.+......++++-+.+| |+-+..++++....++|..+++.+
T Consensus 82 ~~Llli~~G~~iR~~~~-------~~~L~~gt~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~~aaLaa~l 153 (395)
T COG2807 82 LALLLIAAGILIRSLGG-------LPLLFLGTLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGAGAALAAAL 153 (395)
T ss_pred HHHHHHHHHHHHHhccc-------HHHHHHHHHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHHHHHHHhhh
Confidence 99999999999988884 4889999999999999999999999999998 667999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHh
Q 010112 183 ALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQ 262 (518)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~ 262 (518)
...+.+..+ +||....+-+.++++.++.+ +|...+. . ...
T Consensus 154 avpla~~~~----------------------gW~~aL~~WAl~allAl~~W--lPq~~r~--~---~~~----------- 193 (395)
T COG2807 154 AVPLAQHSG----------------------GWRGALGFWALLALLALLIW--LPQALRE--Q---AAS----------- 193 (395)
T ss_pred hhHHHHhhc----------------------cHHHHHHHHHHHHHHHHHHH--hhhcccc--c---ccc-----------
Confidence 999986442 49999999999988877664 3432211 0 000
Q ss_pred hhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHH
Q 010112 263 VELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVY 342 (518)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 342 (518)
.+...++..++++++ ..|.+.+.+...+..+|....|+|.++.+.|+++.+.+.
T Consensus 194 ------------~~~~~~~~~~vw~~~-------~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~aG~------- 247 (395)
T COG2807 194 ------------IATKLVSVRKVWRSP-------LAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAEAGS------- 247 (395)
T ss_pred ------------cccccccccccccCc-------hhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHhhh-------
Confidence 000001112233333 446677777788899999999999999999999887554
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhhhcc-ChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCc
Q 010112 343 KIARAQTLIALCSTVPGYWFTVAFIDYMG-RFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGP 421 (518)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (518)
......+.+++.++....+.+|.. +|+..+....++.++.+.+.+... ...+.+ .+..+.+..+.
T Consensus 248 -----llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~-----~~~~lw----~~llG~G~G~~ 313 (395)
T COG2807 248 -----LLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPG-----QLPILW----ALLLGLGQGGA 313 (395)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhh-----hHHHHH----HHHHhCccchH
Confidence 667777788888999999999754 556666666666666666554331 112222 12222332333
Q ss_pred cceeeecccccc-chhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 422 NATTFVVPAEIF-PARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 422 ~~~~~~~~~~~~-p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
.|+....+.+.. .++..+.-.|+.+.++++-+.+||.++|++.|.+| +|+..+...+.+.+...+.-
T Consensus 314 F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g------------sw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 314 FPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG------------SWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred HHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC------------ChHHHHHHHHHHHHHHHHHH
Confidence 455555555443 56777888999999999999999999999998776 88888888877777776665
Q ss_pred h
Q 010112 501 L 501 (518)
Q Consensus 501 ~ 501 (518)
+
T Consensus 382 l 382 (395)
T COG2807 382 L 382 (395)
T ss_pred h
Confidence 5
No 92
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.94 E-value=1.3e-24 Score=215.20 Aligned_cols=349 Identities=15% Similarity=0.085 Sum_probs=226.2
Q ss_pred HHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhh----cchhh-HHHHHHHHHHHHHHHhhhc
Q 010112 44 LVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDK----LGRKK-VYGITLILMVISSIASGLS 118 (518)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr----~Grr~-~~~~~~~l~~i~~~~~~~~ 118 (518)
...+.+.+++ |+++.+.|++.++..+..++..|+.|+++|| +|||| .++.+..+.+++.+++...
T Consensus 21 ~l~~~~~~~~----------g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~ 90 (437)
T TIGR00792 21 YLLFFYTDVL----------GLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTT 90 (437)
T ss_pred HHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhC
Confidence 3555566777 9999999999999999999999999999997 67755 5778888888888888777
Q ss_pred cCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 010112 119 FGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAP 197 (518)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~ 197 (518)
++......+..+++.+++.+++.+...+...++..|.. +++||++..++.+.+..+|..+++.+.+.+....+.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~----- 165 (437)
T TIGR00792 91 PDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGG----- 165 (437)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 65322222567788889999988887788888999987 568999999999999999988888877776644331
Q ss_pred CCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhh
Q 010112 198 PYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLS 276 (518)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (518)
.....+||+.+++.++++++..+. .+..+|+++.. + .+ ++
T Consensus 166 -----------~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~--~-~~-~~------------------------ 206 (437)
T TIGR00792 166 -----------GDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEI--P-KN-IE------------------------ 206 (437)
T ss_pred -----------CcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCC--C-cc-cc------------------------
Confidence 013467999999988877766544 45566654210 0 00 00
Q ss_pred hccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhc
Q 010112 277 QRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCST 356 (518)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (518)
++.+..+.++....++ .++......++....++....+.+.+.+. .+... ...+ .......++.
T Consensus 207 -~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----------~~~~-~~~~~~~i~~ 270 (437)
T TIGR00792 207 -KKLSLKQIFKALFKND---QLLILCLAYLFYNLAFNIKNGVQVYYFTY-VLGDP----------ELFS-YMGSIAIVAG 270 (437)
T ss_pred -cCCCHHHHHHHHhCCH---HHHHHHHHHHHHHHHHHHHcchhheeEee-ecCCh----------HHHH-HHHHHHHHHH
Confidence 0000111111111111 11222222233333333332233333221 11110 0112 2344456777
Q ss_pred ccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccc--
Q 010112 357 VPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFP-- 434 (518)
Q Consensus 357 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-- 434 (518)
+++.++.+++.||+|+|+.+..+..+.+++.+.+.+.. ++.....+...+ .++......+..+++.+|..+
T Consensus 271 ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 343 (437)
T TIGR00792 271 LIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAG------SNLPLILVLIIL-AGFGQNFVTGLVWALVADTVDYG 343 (437)
T ss_pred HHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcc------hhHHHHHHHHHH-HHHHHHHHHHHHHHHHhhhhhhh
Confidence 88889999999999999999888877777666554432 122222222222 222222234566677777754
Q ss_pred -----hhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 010112 435 -----ARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP 469 (518)
Q Consensus 435 -----~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 469 (518)
++.+|.+.|+.++...+|..+++.+.|.+.+..|.
T Consensus 344 ~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 344 EWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 56689999999999999999999999999987653
No 93
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.93 E-value=4.1e-24 Score=193.47 Aligned_cols=385 Identities=13% Similarity=0.049 Sum_probs=263.0
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHH
Q 010112 23 TAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYG 102 (518)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~ 102 (518)
..++.+...+++.++......+++|.+++.| +++..|.+++...++.|+.+.+++.|++.+|+|+|+.++
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~~f----------~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~ 82 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKEVF----------DLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIV 82 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHHHh----------CccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHH
Confidence 3445556667888888899999999999999 999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 010112 103 ITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIV 182 (518)
Q Consensus 103 ~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l 182 (518)
.++.++++++.+..=+.+. +.+..++.+-++.|.|.+...+....+++...++++..+.+++.+...++|.+++|.+
T Consensus 83 lgL~l~avg~~lF~pAa~~---~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~ 159 (422)
T COG0738 83 LGLLLYAVGAALFWPAASS---KSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLL 159 (422)
T ss_pred HHHHHHHHHHHHHhhhhhh---hhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHH
Confidence 9999999999998644332 1288999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhcccCCCCCCCCCCCC--CCCCCCCCCcchHHHHhhhHHHHHHHHHHhc--CCCCcchhhhhhccHHHHHHHHH
Q 010112 183 ALIVSSAFDHHFKAPPYSVDPV--GSTAPEADYVWRIVLMVGALPAALTYYWRMR--MPETARYTALVAKNAKQAAADMS 258 (518)
Q Consensus 183 ~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~~~ 258 (518)
+..+...-.. .+.++. .+.....-..||.+|...+...++..+.... .||.++.. +++.
T Consensus 160 g~~lils~~~------~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~------~~~~----- 222 (422)
T COG0738 160 GSSLILSGVA------LTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAA------PSLG----- 222 (422)
T ss_pred HHHHHHhhhh------hccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccc------cccc-----
Confidence 9998753100 000000 0000001123788888876666555444332 34432210 0000
Q ss_pred HHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhh
Q 010112 259 KVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNA 337 (518)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~ 337 (518)
+.+.....+.++++. +....+..++....-.....|.+.++.+ .|.+..
T Consensus 223 -----------------~~~~~~~~~l~~~~~-------~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~------ 272 (422)
T COG0738 223 -----------------ASGSAGLSSLFQNKH-------LRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQ------ 272 (422)
T ss_pred -----------------ccccchHHHHHhChH-------HHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHH------
Confidence 000001112222322 2223344444444555566777888777 444333
Q ss_pred hHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHH
Q 010112 338 IHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFA 417 (518)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (518)
.+.........+.++|++++.++..|+...|.+....++..+.++...+.. + ...+....+.+.+.
T Consensus 273 ------~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~-------g-~v~~~~l~~ig~F~ 338 (422)
T COG0738 273 ------QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIG-------G-VVALYALFLIGLFN 338 (422)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc-------C-hHHHHHHHHHHHHh
Confidence 344477777888899999999999999999988877766666665555554 2 22222333333333
Q ss_pred hcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHH
Q 010112 418 NFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGM 497 (518)
Q Consensus 418 ~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 497 (518)
....|..++...+..| ++.. ..|....+...|+.+.|.+.|++.| ..|....+.....+|.+..
T Consensus 339 -simfPTIfslal~~l~-~~ts-~~s~~l~maivGGAiiP~l~G~i~d-------------~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 339 -SIMFPTIFSLALKNLG-EHTS-VGSGLLVMAIVGGAIIPPLQGVIAD-------------MFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred -HHHHHHHHHHHHhccC-cccc-ccceeeeeheecchHHHHHHHHHHH-------------hhhhHHHHHHHHHHHHHHH
Confidence 3357888888888888 4333 3444455567899999999999985 4455555554444444444
No 94
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.93 E-value=1e-24 Score=195.85 Aligned_cols=385 Identities=13% Similarity=0.038 Sum_probs=258.9
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcc----------------------------------------cCCCCC
Q 010112 22 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYH----------------------------------------VDGAKK 61 (518)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~----------------------------------------~~~~~~ 61 (518)
..++.....+.+.+......+.|.+|....+..+ .....+
T Consensus 20 ~lilviv~ialllDnmL~~vivPiiP~~L~d~~~~p~~~~~~~~is~~~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~ 99 (464)
T KOG3764|consen 20 PLILVIVSIALLLDNMLYTVIVPIIPGYLYDIQAEPTIIQPFFPISTAPIPPGSMSSFSSLNISTESTNASAGKSPAEAI 99 (464)
T ss_pred ceEEEEEehhhhccCccceeeeccCccHHHHhccCCccCccccccccCCCCCccccceecccCCccccccccccCchhcc
Confidence 3455556666777766666666776665544431 001124
Q ss_pred CCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcc
Q 010112 62 PGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGI 141 (518)
Q Consensus 62 ~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 141 (518)
+.+-+++++|++.+...+.+.+.+++.|.+.||+|+|-.+++|++.+..+++++++.++ ++.++++|.+||+|.
T Consensus 100 ~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s------y~~l~vAR~LQgvgs 173 (464)
T KOG3764|consen 100 SLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS------YPMLFVARSLQGVGS 173 (464)
T ss_pred CccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch------hHHHHHHHHHhhhhH
Confidence 55677889999999999999999999999999999999999999999999999999999 699999999999999
Q ss_pred ccccchhhHHhhhhcccc-cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHH
Q 010112 142 GGDYPLSATIMSEYANKK-TRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLM 220 (518)
Q Consensus 142 g~~~~~~~~~i~e~~~~~-~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~ 220 (518)
+.......++++|.+|.+ +|++++|+...+.++|-++||+.|+.+-+..+ .+.+|+
T Consensus 174 A~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~G-----------------------k~aPFl 230 (464)
T KOG3764|consen 174 AFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAG-----------------------KSAPFL 230 (464)
T ss_pred HHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcC-----------------------CcCcHH
Confidence 999999999999999976 57999999999999999999999999987666 889999
Q ss_pred hhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHH
Q 010112 221 VGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFG 300 (518)
Q Consensus 221 ~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (518)
+.++++++...+.+++-|..+. +++ ..++....+++++++...-
T Consensus 231 VL~~v~Lld~~L~l~vi~p~~~---~~~--------------------------~~~~~~~~~~Ll~dP~I~~------- 274 (464)
T KOG3764|consen 231 VLAIVLLLDGALQLLVIEPTEM---DPD--------------------------STEQGTPMWSLLMDPYILL------- 274 (464)
T ss_pred HHHHHHHHHHHHHHheeCcccc---Ccc--------------------------ccccCccHHHHHhCchHhh-------
Confidence 9999988877665554332111 000 0011123344444443321
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCC-CcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChh--HH
Q 010112 301 TTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPP-AATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFA--IQ 376 (518)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~--~~ 376 (518)
........+.......--++.++. +.. ++. +.+. .++...+...+++.+.|.+.||++..+ ..
T Consensus 275 ~agai~~~n~~lafLePtlslwm~e~m~-~p~w~~G~------------~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~ 341 (464)
T KOG3764|consen 275 IAGAITFSNSSLAFLEPTLSLWMLETMF-TPGWEVGL------------AFLPASLSYAIGTNLFGKLADKYPHLRWLLS 341 (464)
T ss_pred hhcchhhccchHHHhCcccHHHHHHhcc-CCCcceee------------eecccccchhccCchHHHHHHhcCchhHHHH
Confidence 111111112222222222233333 333 333 4444 677788888899999999999999433 33
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh---hhhhHHHHHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR---LRSTCHGISAAAGKAGA 453 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~~~g~ 453 (518)
..+.+..+++.....+.... ...+.......+.+........|.. .+..|....+ ..|.+.++......+|.
T Consensus 342 ~~gl~~~G~~~~~iP~~~~~----~~L~vp~~~l~~~i~~~dasl~P~l-~~lvd~rh~s~~~vYGsVyaIad~a~sla~ 416 (464)
T KOG3764|consen 342 LGGLATVGVSSGPIPFATSI----AQLWVPNFGLGFGIGLADASLIPTL-GYLVDPRHVSGFNVYGSVYAIADAAFSLAY 416 (464)
T ss_pred HHHHHHHHHHhchhHhhhhH----HHHhhhhHHHHHHHHHHHHHHhhhh-HHhcchhhccccceeeeHHHHHHHHHHHhh
Confidence 33333334333333333210 0111111222222223333334433 2333332233 56889999999999999
Q ss_pred HHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 010112 454 IVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLC 502 (518)
Q Consensus 454 ~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (518)
.+||.+.|.+. +..|+.+...+.++..++..-...+
T Consensus 417 a~GP~~gg~iv-------------~~iGF~wl~~iig~~n~iyapvl~l 452 (464)
T KOG3764|consen 417 AIGPTFGGSLV-------------EAIGFEWLMTIIGILNLIYAPVLLL 452 (464)
T ss_pred hccccccchhe-------------eehhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 5778888888888888877655553
No 95
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.93 E-value=8.6e-23 Score=198.61 Aligned_cols=378 Identities=12% Similarity=0.076 Sum_probs=236.1
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHH--HHHHHHHHHhhhhhh-hhhhhhcchhhHH
Q 010112 25 IVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAV--NGVALCGTLAGQLFF-GWLGDKLGRKKVY 101 (518)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~--~s~~~lg~~i~~~~~-G~l~dr~Grr~~~ 101 (518)
++.+...++.++.-.....+.+|.+.++. |.|.+++|++ .++..+...+.+++. ++..||+||||..
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~~----------g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~ 72 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRED----------GAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSW 72 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhH
Confidence 45566678889999899999999999998 9999999997 467788888888888 5579999999987
Q ss_pred HHHHHHH-HHHHHHhh-hccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHH
Q 010112 102 GITLILM-VISSIASG-LSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (518)
Q Consensus 102 ~~~~~l~-~i~~~~~~-~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg 179 (518)
++.+.+. ++.....+ +.... .....++..-++.++..+...+...++..|..++++++...+....+..+|.++|
T Consensus 73 i~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g 149 (390)
T TIGR02718 73 VLPMQCLVSACLASLALVGPDV---AGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGG 149 (390)
T ss_pred HHHHHHHHHHHHHHHHcCCcch---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHH
Confidence 5555332 22222222 21110 0023445555666677777778888889999998988998888888889999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHH
Q 010112 180 GIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSK 259 (518)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (518)
+...+++.+..+ ||..|++.++..++..+..++++|+++. .+ +++++..+
T Consensus 150 ~~~~~~l~~~~g-----------------------w~~~f~~~a~l~~~~~~~~~~~~~~~~~--~~-~~~~~~~~---- 199 (390)
T TIGR02718 150 GAGTLVLFGKFG-----------------------QRPAFLLVACVPLASLVCVLWLKDRAVA--SP-EAPLARRA---- 199 (390)
T ss_pred HHHHHHHHHHhC-----------------------HHHHHHHHHHHHHHHHHHHHHcCCCCcC--cc-ccchhhHH----
Confidence 988888875544 9999999888777655554444443221 00 00000000
Q ss_pred HHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhH
Q 010112 260 VLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIH 339 (518)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 339 (518)
+.++.++++.. +......++..........+.+.++.+.|+++++.
T Consensus 200 ---------------------~~~~~l~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~l~~~G~s~~~i------ 245 (390)
T TIGR02718 200 ---------------------SLFRFFRRPLA-------WSLLALALLSAMTAVSGFGLSKLYLVDAGWPLEWI------ 245 (390)
T ss_pred ---------------------HHHHHHcCcCH-------HHHHHHHHHHHHHHHHHHHHhhHHHHhcCCCHHHH------
Confidence 01111222211 11222222333333344445667777778776652
Q ss_pred HHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHH-HHh
Q 010112 340 EVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFF-FAN 418 (518)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 418 (518)
+...........+++.+++|++.||+|+|+.+..+..+.++..+........+. ..... ......+... ..+
T Consensus 246 -----g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~g 318 (390)
T TIGR02718 246 -----GRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWL-APGIA-VAWSCSAFGSLITG 318 (390)
T ss_pred -----HHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHccc-CCcHH-HHHHHHHHHHHHHH
Confidence 222333333456667889999999999999988776655333222221110010 01111 1111111111 112
Q ss_pred cCccceeeeccccccch-hhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHH
Q 010112 419 FGPNATTFVVPAEIFPA-RLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGM 497 (518)
Q Consensus 419 ~~~~~~~~~~~~~~~p~-~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 497 (518)
. ..+..+....+..++ +.+++.+++.+...++|..++|.+.|.+.| ..|++..|.+.+++.+++.
T Consensus 319 ~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~-------------~~G~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 319 I-TSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTD-------------RFGYAGGFLSGTVLAVLAI 384 (390)
T ss_pred H-HHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HHccHHHHHHHHHHHHHHH
Confidence 2 123333444455554 889999999999999999999999999984 5578888888887777765
Q ss_pred HHH
Q 010112 498 ICT 500 (518)
Q Consensus 498 ~~~ 500 (518)
+..
T Consensus 385 ~~~ 387 (390)
T TIGR02718 385 LLA 387 (390)
T ss_pred HHh
Confidence 543
No 96
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.92 E-value=5.9e-22 Score=191.68 Aligned_cols=419 Identities=11% Similarity=0.022 Sum_probs=266.0
Q ss_pred hhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhh----hcchhhHHHHH-HHHHHHH
Q 010112 37 YDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGD----KLGRKKVYGIT-LILMVIS 111 (518)
Q Consensus 37 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~d----r~Grr~~~~~~-~~l~~i~ 111 (518)
+......+..+.+.+++ +.+..+.+++..+..+...+.+|+.|+++| |+||||.++.+ .....++
T Consensus 18 ~~~~l~~~~l~~yl~~l----------g~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~ 87 (477)
T TIGR01301 18 FGWALQLSLLTPYVQEL----------GIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFA 87 (477)
T ss_pred HHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHH
Confidence 33444455555566777 999999999999999999999999999999 59999997764 6666677
Q ss_pred HHHhhhccCCch---------hh--HHHHHHHHHHHhhhccccccchhhHHhhhhcccccc--hhHHHHHHHHHHHHHHH
Q 010112 112 SIASGLSFGKSA---------KG--VIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTR--GAFIAAVFAMQGFGILA 178 (518)
Q Consensus 112 ~~~~~~~~~~~~---------~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~r--g~~~~~~~~~~~lG~~l 178 (518)
.++.+++++... .. ..+.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++
T Consensus 88 l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~il 167 (477)
T TIGR01301 88 VILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVL 167 (477)
T ss_pred HHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 777777665200 00 012233333344557777788899999999998865 57999999999999999
Q ss_pred HHHHHHHHH--hhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHH
Q 010112 179 GGIVALIVS--SAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAA 255 (518)
Q Consensus 179 g~~l~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~ 255 (518)
|+.+++... +.++..... .......+.|..|++.++..++..++ .+..+|.|... .++.++++
T Consensus 168 g~~~g~~~~~~~~~~~~~~~----------~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~~~-- 233 (477)
T TIGR01301 168 GYAAGAYSGLYKIFPFTKTE----------ACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFINSE-- 233 (477)
T ss_pred HHHHHHHHhHHHhccccccc----------ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchhhh--
Confidence 999998752 222110000 00011235789999988877776555 45678876421 10000000
Q ss_pred HHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcch
Q 010112 256 DMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATM 335 (518)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 335 (518)
. +..++. +.+...+++++ ..++..+.++.++...++..+.++.+..|.+.+..+.-+.......
T Consensus 234 -~------~~~~~~-------~~~~~~~~i~~--~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~ 297 (477)
T TIGR01301 234 -A------APPSKH-------GEEAFFGELFG--AFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG 297 (477)
T ss_pred -c------cccccc-------chhhhHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcch
Confidence 0 000000 00001112222 2233334556667777777777777777777776642222111112
Q ss_pred hhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccC-hhHHHHHHHHHHHHHHHHhhcccccc---C----------CC
Q 010112 336 NAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGR-FAIQMMGFFFMTVFMFALAIPYHHWT---L----------KP 401 (518)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~~~~~~---~----------~~ 401 (518)
..+.+....+........+...+.+++-.++.+|+|+ |+....+.++.++++....+.....+ . ..
T Consensus 298 ~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~ 377 (477)
T TIGR01301 298 AKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPT 377 (477)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcch
Confidence 2445554556666666666666777788899999985 66668888888888777765431000 0 00
Q ss_pred c-hhHHHHHHHHHHHHHhcCccceeeeccccccch--hhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCC
Q 010112 402 N-RIGFVIMYSLTFFFANFGPNATTFVVPAEIFPA--RLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPA 478 (518)
Q Consensus 402 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~ 478 (518)
. ....+..+...+... .....+.++++++..|+ +..|..+|+.|.+-.+.+++.....|.+.+..|+
T Consensus 378 ~~~~~~l~~~~~~Gi~~-A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~--------- 447 (477)
T TIGR01301 378 GIKASALIVFAILGIPL-AITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG--------- 447 (477)
T ss_pred hhHHHHHHHHHHhhHHH-HHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC---------
Confidence 0 133333444433333 33567889999999884 4569999999999999999999999987665552
Q ss_pred cccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 479 GIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 479 ~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
+-...+.+.++..+++.+..+ .+|+++
T Consensus 448 --~~~~~~~~~gv~~~~aa~~~~~~~~~~~ 475 (477)
T TIGR01301 448 --GNLPAFVVGAVAAFVSGLLALILLPRPR 475 (477)
T ss_pred --CCeeHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 334677888888888888877 667654
No 97
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.92 E-value=2.5e-22 Score=199.80 Aligned_cols=415 Identities=11% Similarity=0.059 Sum_probs=231.7
Q ss_pred HHHhhhhhhhHHHHHH-HhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhh-cchhhHHHHHHHH
Q 010112 30 MGFFTDAYDLFCISLV-TKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDK-LGRKKVYGITLIL 107 (518)
Q Consensus 30 ~~~~~~~~~~~~~~~~-~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr-~Grr~~~~~~~~l 107 (518)
+..+...+..+..... ...+.+++ |++..+.+++.+.+........+++|+++|| +|||+++..+.++
T Consensus 28 ~~~~~~~~~~y~~~~~l~~yl~~~l----------g~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~ 97 (500)
T PRK09584 28 SIELWERFGYYGLQGIMAVYLVKQL----------GMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIV 97 (500)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 3334444444444443 44456778 9999999999988877777777899999999 5999999999999
Q ss_pred HHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhccccc--chhHHHHHHHHHHHHHHHHHHHHHH
Q 010112 108 MVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKT--RGAFIAAVFAMQGFGILAGGIVALI 185 (518)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~--rg~~~~~~~~~~~lG~~lg~~l~~~ 185 (518)
.+++..+++++++. .+.+.++|+++|++.|...+...+++.|++|+++ |..+.++++.+.++|..+||.++++
T Consensus 98 ~~ig~~l~~~~~~~-----~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~ 172 (500)
T PRK09584 98 LAIGYALVAWSGHD-----AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPW 172 (500)
T ss_pred HHHHHHHHHHhccc-----HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999887542 5677789999999999999999999999998653 4567889999999999999999999
Q ss_pred HHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH----HhcCCCCcchhhhhhccHHHHHHHH----
Q 010112 186 VSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW----RMRMPETARYTALVAKNAKQAAADM---- 257 (518)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~----~~~~~esp~~~~~~~~~~~~~~~~~---- 257 (518)
+.+.. |||+.|.+.++..++.++. ...++|.++....++.+........
T Consensus 173 l~~~~-----------------------g~~~~F~i~~i~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (500)
T PRK09584 173 LAAKY-----------------------GWSVAFALSVVGMLITVVNFAFCQRWVKQYGSKPDFEPINYRKLLLTIVGVV 229 (500)
T ss_pred HHHhh-----------------------CHHHHHHHHHHHHHHHHHHHHHhHHHhccCCCCCCccccchhhHHHHHHHHH
Confidence 97543 4999999877544443222 2234443211000000100000000
Q ss_pred -----HHHHhhhcchhhhHh---------hhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHH
Q 010112 258 -----SKVLQVELEAEEDKV---------AKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIF 323 (518)
Q Consensus 258 -----~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (518)
......+. +..... ....... . ..++. .++ +.+... ..+.....++....-.+..+
T Consensus 230 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~-~~~---~~~~~~-~~~~~~i~f~~~~~q~~~~l 299 (500)
T PRK09584 230 ALIAIATWLLHNQ-EIARMALGVVALGIVVIFGKEA---F-AMKGA-ARR---KMIVAF-ILMLEAIIFFVLYSQMPTSL 299 (500)
T ss_pred HHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHH---h-hcCHH-HHH---HHHHHH-HHHHHHHHHHHHHHHhccHH
Confidence 00000000 000000 0000000 0 00001 111 111111 11122233333333333332
Q ss_pred HHh---cCCCCCcchhhhHHHHHHHHHHHHHHHhhcccc----hhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcccc
Q 010112 324 SAI---GWIPPAATMNAIHEVYKIARAQTLIALCSTVPG----YWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHH 396 (518)
Q Consensus 324 ~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 396 (518)
... ..+....+...- .+. ......+..++. ....+++.+|.+.++.+.++.++.+++++.+......
T Consensus 300 ~~~~~~~~~~~~~g~~i~-----~~~-~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f~~l~~~~~~ 373 (500)
T PRK09584 300 NFFAIRNVEHSILGIAVE-----PEQ-YQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAFLVLPLGAKF 373 (500)
T ss_pred HHHHHHhccccccceEEC-----HHH-HHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 221 111111111000 001 111222222222 3334666666666678888889988888887665422
Q ss_pred ccCC-CchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCC
Q 010112 397 WTLK-PNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAG 475 (518)
Q Consensus 397 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~ 475 (518)
.... .....+.+...+..+.+.....|....++.+..|++.||+++|+......+|..++..+.+........ .+.
T Consensus 374 ~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~---~~~ 450 (500)
T PRK09584 374 ANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNV---TDP 450 (500)
T ss_pred cCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---ccc
Confidence 1111 111224455555556666667888889999999999999999987766666666665555432100000 000
Q ss_pred CCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 476 YPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 476 ~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
.....++...|...++.+++..+..+
T Consensus 451 ~~~~~~~~~~f~~~~~~~~~~a~~~~ 476 (500)
T PRK09584 451 LMSLEVYGRVFLQIGIATAVIAVLML 476 (500)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 00112466778777776665544433
No 98
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.90 E-value=1.8e-21 Score=190.63 Aligned_cols=378 Identities=15% Similarity=0.117 Sum_probs=228.1
Q ss_pred HHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHH
Q 010112 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLIL 107 (518)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l 107 (518)
+++.....++.....+.+++.+..|+ +-+ ....|+.+...++.+++.++.|.++|.||||..++.+.++
T Consensus 49 ~~~~~~~~~~~~~~~a~~l~~I~~di----------G~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l 117 (599)
T PF06609_consen 49 FSLAVIAAYFVLVLPASILPYINADI----------GGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLL 117 (599)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHhc----------CCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHH
Confidence 33334444455555577788888888 543 6788999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 108 MVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 108 ~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
..+|+++++.+++ ...++++..+.|+|.|... .....++|..|.|.|+...++...........++.++..+.
T Consensus 118 ~vvG~Iv~atA~~------~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~ 190 (599)
T PF06609_consen 118 GVVGSIVCATAQN------MNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA 190 (599)
T ss_pred HHhHHHHhhcCCc------HHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc
Confidence 9999999999999 8999999999999987765 45666899999999988777666554444445556655443
Q ss_pred hhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH--hcCCCCcchhhhhhc--cHHHHHHHHHHH---
Q 010112 188 SAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR--MRMPETARYTALVAK--NAKQAAADMSKV--- 260 (518)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~--~~~~esp~~~~~~~~--~~~~~~~~~~~~--- 260 (518)
.+.+|||.|++.++...+.++.. ++.|.+.+. .+.+ ...+..++++-.
T Consensus 191 -----------------------~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~--~~~~~~s~~~~l~~lD~IG~~ 245 (599)
T PF06609_consen 191 -----------------------AHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQ--LHGRKLSKREQLKELDWIGIF 245 (599)
T ss_pred -----------------------cCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhh--hccccCcHHHHHHHhhHHHHH
Confidence 23459999999888766654442 333432211 1111 122222222111
Q ss_pred ----------Hhhhcchh-hhHhhhh------------------hhccCCc-ccchhhhhhhhhhhHHHHHHHHHHHHHH
Q 010112 261 ----------LQVELEAE-EDKVAKL------------------SQRDSNS-FGLFSREFLKRHGLHLFGTTSTWFLLDI 310 (518)
Q Consensus 261 ----------~~~~~~~~-~~~~~~~------------------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (518)
...+-... ..+.+.. -+..... ..++..+.++ +.+.+.......+...+
T Consensus 246 L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~~Lf~-~~r~~~~~lvi~fi~G~ 324 (599)
T PF06609_consen 246 LFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPHRLFK-DRRGFAALLVISFISGM 324 (599)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCHHHhc-cchHHHHHHHHHHHHHH
Confidence 00000000 0000000 0000011 1122222232 22344444555566666
Q ss_pred HHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChh-HHHHHHHHHHHHHH
Q 010112 311 AFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFA-IQMMGFFFMTVFMF 388 (518)
Q Consensus 311 ~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~-~~~~~~~~~~~~~~ 388 (518)
.++....+.|..... ++-++..... .........++...|.++.+.+..+++|-| .++.+..++.++..
T Consensus 325 ~~~s~~~l~p~~~~~vf~~d~~~~~~---------~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~li~~~~~~ta~~G 395 (599)
T PF06609_consen 325 NFFSVNILWPQQVVNVFGSDPISITE---------IGWISSPVGFGSCAGAVILGLLFSKIRHIKWQLIFGSVLMTAFCG 395 (599)
T ss_pred HHHHHHHHHHHHHhhhccCCCcccce---------eehhhhhHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHH
Confidence 777777777766554 2333221100 111444555566667777888888888744 44566666655544
Q ss_pred HHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhh
Q 010112 389 ALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAA 464 (518)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 464 (518)
++..... ++... .+....+.+.+.+. ........+.-..|++.-|++.|+..+++.+|+.++..+...+.
T Consensus 396 ama~~~~----~n~~~-~i~~~~l~g~giG~-~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 396 AMAAVRP----DNKNA-AIAFLVLAGFGIGG-ILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHHHccC----CCcch-HHHHHHHHHHhHHH-HHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4443331 11111 12222222222222 22233445556779999999999999999999999988876655
No 99
>PTZ00207 hypothetical protein; Provisional
Probab=99.89 E-value=1.7e-20 Score=185.26 Aligned_cols=184 Identities=14% Similarity=0.156 Sum_probs=138.3
Q ss_pred hhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcch
Q 010112 18 QLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGR 97 (518)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Gr 97 (518)
+.++|.++.+........+ ..+.++...|.+++++ |++..+.+++.++. ....+++++.|++.||+||
T Consensus 23 e~~Rw~~lva~~~~~~~~g-~~y~fsv~s~~L~~~l----------gls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~ 90 (591)
T PTZ00207 23 EPRRFALLVLGAFCSICTS-FMYAFNLISGAMQARY----------NLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGP 90 (591)
T ss_pred ccchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh----------CcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCc
Confidence 3456665555554444433 3356677888899999 99999999998874 4456788889999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHH
Q 010112 98 KKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGIL 177 (518)
Q Consensus 98 r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~ 177 (518)
|+++.++.++++++.++++++.+.....+++.+++.|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.+
T Consensus 91 R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsa 169 (591)
T PTZ00207 91 RPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSA 169 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999997210000118999999999999999988999999999997 7899999999999999998
Q ss_pred HHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHH-HHhcCCC
Q 010112 178 AGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYY-WRMRMPE 238 (518)
Q Consensus 178 lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~-~~~~~~e 238 (518)
+.+.+...+.. .+|+..|++.+++.++..+ ...++++
T Consensus 170 I~~~l~~~l~~------------------------~~~~~~fl~l~vl~~vv~ll~~~~vr~ 207 (591)
T PTZ00207 170 ILGSIQLAFFS------------------------DNTSAYFFFLMSFALVVGILAIVFMRL 207 (591)
T ss_pred HHHHHHHHHHH------------------------HhHHHHHHHHHHHHHHHHHHHHhheeC
Confidence 64444433331 1288888877776665433 3444433
No 100
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.88 E-value=4.6e-22 Score=170.06 Aligned_cols=402 Identities=11% Similarity=0.032 Sum_probs=245.6
Q ss_pred HHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhh-cchh
Q 010112 20 YHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDK-LGRK 98 (518)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr-~Grr 98 (518)
.|.+.++..++..|-.+++....+........+. +++.++..++.+.|.+-..+.++++|++.|| +|-|
T Consensus 41 hr~m~lv~mc~lgfgsyfcyd~p~alq~~fk~d~----------ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir 110 (459)
T KOG4686|consen 41 HRFMALVFMCLLGFGSYFCYDAPGALQIDFKLDS----------NIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIR 110 (459)
T ss_pred hHHHHHHHHHHhcccceeecCCchhhhhhhhccc----------ccceeeeeeeeeeccCCCEEEeeecceeehhhhhhh
Confidence 4556666667777777777776676666665555 8999999999999999999999999999996 7888
Q ss_pred hHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHH
Q 010112 99 KVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (518)
Q Consensus 99 ~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~l 178 (518)
..-++-++...++.++++.-.-. +.||.++++||+.|+|.-....+..+++.-|+..||.+.++|+......+|..+
T Consensus 111 ~gtii~~~fv~~GqliFa~Ggi~---~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~Gstv 187 (459)
T KOG4686|consen 111 LGTIILCIFVFLGQLIFAAGGIS---HAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTV 187 (459)
T ss_pred HHHHHHHHHHHHHHHHHHhchHH---HHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhcee
Confidence 77666666666777777653321 229999999999999888888889999999999999999999999999999988
Q ss_pred HHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHH----HhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHH
Q 010112 179 GGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVL----MVGALPAALTYYWRMRMPETARYTALVAKNAKQAA 254 (518)
Q Consensus 179 g~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f----~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~ 254 (518)
-..+.+++.+..+...+ ..+- ... .+....+...++... +..+ ..+.++
T Consensus 188 Nf~lm~~ly~~~~~~~~----------------~~gh-T~LG~~l~~~~~tc~~slical----~lg~------~D~rAe 240 (459)
T KOG4686|consen 188 NFLLMPFLYDTMGRMFP----------------GVGH-TLLGLWLCFEVKTCKQSLICAL----SLGL------SDDRAE 240 (459)
T ss_pred eeeecHHHHHHHHHhcc----------------cchH-HHHHHHHHHHHHHHHHHHHHHH----Hhhh------hhhHHH
Confidence 88888888766553211 0000 000 001111111111100 0000 001111
Q ss_pred HHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCc
Q 010112 255 ADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAA 333 (518)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~ 333 (518)
+.+++..+.. .+..+. ..... ... .+|.+...-++.....+.+....|.++++ .|+++...
T Consensus 241 rilh~e~g~~--Ge~pkL--------tdv~~-----f~p---pfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a 302 (459)
T KOG4686|consen 241 RILHLEEGFL--GEEPKL--------TDVNT-----FYP---PFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSA 302 (459)
T ss_pred HHHhhhcCcc--cCCccc--------ccccc-----cCc---cHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhc
Confidence 1111100000 000000 00111 111 23333333334444444455556666664 78888764
Q ss_pred chhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHH-HHHHHHhhccccccCCCchhHHHHHHHH
Q 010112 334 TMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMT-VFMFALAIPYHHWTLKPNRIGFVIMYSL 412 (518)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (518)
+. +...+..+ ..+..++.|.++||.|++...+.+..+.. ++...+.+... +++....+..+
T Consensus 303 ~~-----------i~s~vy~I-sav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~Ft~l------sPy~~m~~lGL 364 (459)
T KOG4686|consen 303 GN-----------ILSTVYGI-SAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFFTFL------SPYTSMTFLGL 364 (459)
T ss_pred cc-----------hhhhhhhh-hhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHhhhc------cHHHHHHHHhh
Confidence 43 23444443 44567788999999999987776555443 34444444331 22222222222
Q ss_pred HHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHH
Q 010112 413 TFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVV 492 (518)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 492 (518)
.++. .....|.+++.++|+++-|++.|.+..+.++|-.+.|++.|.+.|..| .....+.-|+.++.+
T Consensus 365 ---sysl-lAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g---------~y~~le~ffl~~~~~ 431 (459)
T KOG4686|consen 365 ---SYSL-LACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDG---------SYDNLEAFFLIIGLM 431 (459)
T ss_pred ---hHHH-HHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCC---------chhhHHHHHHHHHHH
Confidence 2222 123356677888999999999999999999999999999999997443 111223345555556
Q ss_pred HHHHHHHHhhcccCCCCC
Q 010112 493 NFVGMICTLCVPESKGRS 510 (518)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~ 510 (518)
.+....+.+.+.++++.+
T Consensus 432 aL~svgil~~~N~kq~gn 449 (459)
T KOG4686|consen 432 ALTSVGILFYLNKKQSGN 449 (459)
T ss_pred HHHHHHHHhheeccccCC
Confidence 666665555555544433
No 101
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.88 E-value=1e-19 Score=176.92 Aligned_cols=164 Identities=15% Similarity=0.142 Sum_probs=125.9
Q ss_pred HHhhhhhhhHHHHHHHhh-hhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc-chhhHHHHHHHHH
Q 010112 31 GFFTDAYDLFCISLVTKL-LGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL-GRKKVYGITLILM 108 (518)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~-Grr~~~~~~~~l~ 108 (518)
..+...+..+.....+|. +.+++ |+++.+.+.+.+.+.....++.+++|+++||+ ||||++.++.++.
T Consensus 17 ~~~~e~fs~Yg~~~~L~~yL~~~l----------gls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~ 86 (493)
T PRK15462 17 LQIWEYFSFYGMRALLILYLTNQL----------KYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLM 86 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHH
Confidence 334444444444445544 45567 89999999999999999999999999999999 9999999999999
Q ss_pred HHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccc--cchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 109 VISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKK--TRGAFIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 109 ~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~--~rg~~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
+++.++++...+. ...+.++..+.++|.|...+...++++|.+|++ +|.++.++.+.+.++|..++|.+.+++
T Consensus 87 ~lg~lll~~~~~~-----~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 87 AIGHVVLGASEIH-----PSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHhhcc-----hhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 9998877654321 133444444455666777788889999999975 799999999999999999999999999
Q ss_pred HhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH
Q 010112 187 SSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW 232 (518)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 232 (518)
.+. +|||+.|.+.++..++.++.
T Consensus 162 ~~~-----------------------~Gw~~~F~iaaigm~l~li~ 184 (493)
T PRK15462 162 QEE-----------------------YSWAMGFGLAAVGMIAGLVI 184 (493)
T ss_pred Hhh-----------------------hChHHHHHHHHHHHHHHHHH
Confidence 743 45999999876654444433
No 102
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.88 E-value=6.3e-20 Score=175.70 Aligned_cols=379 Identities=13% Similarity=0.165 Sum_probs=240.3
Q ss_pred HhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc-hhhHHHHHHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG-RKKVYGITLILMVI 110 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G-rr~~~~~~~~l~~i 110 (518)
+++..+..+.+.|..+..-++. +.|..|+|.+.+...+...++++++|.++||.+ +||.+.+..++.++
T Consensus 11 ~f~~f~~~G~~~p~~~~~L~~~----------G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~ 80 (400)
T PF03825_consen 11 YFLYFFAYGAFLPYLPLYLESR----------GFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSAL 80 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHH
Confidence 4445555566667777777777 999999999999999999999999999999986 57777777777777
Q ss_pred HHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHH-HHHHHhh
Q 010112 111 SSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIV-ALIVSSA 189 (518)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l-~~~l~~~ 189 (518)
........++ ++.+++.-++..+......|...++..+... ++++-.|-.-...++|.+++... +..+...
T Consensus 81 ~~~~~~~~~~------f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~ 152 (400)
T PF03825_consen 81 ALLLLAFSSS------FWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGY 152 (400)
T ss_pred HHHHHHHhcc------HHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhh
Confidence 7777777777 6778888888888888888899999888886 33444555556666676666544 2222221
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhh
Q 010112 190 FDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEE 269 (518)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (518)
.+ ..+....+++.+...++.....+.+|+.|+.. ..+++.++
T Consensus 153 ~~--------------------~~~~~~~~~i~~~~~~ll~~~~l~lp~~~~~~-~~~~~~~~----------------- 194 (400)
T PF03825_consen 153 LG--------------------ISGTSLIFYIAAILSLLLAGFALFLPKTPPKR-SAKESVKK----------------- 194 (400)
T ss_pred hc--------------------cccccHHHHHHHHHHHHHHHHHHhCCCCcccc-ccCCCccc-----------------
Confidence 11 01123455555555544444455678876321 00000000
Q ss_pred hHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhc-CCCCCcchhhhHHHHHHHHHH
Q 010112 270 DKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIG-WIPPAATMNAIHEVYKIARAQ 348 (518)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 348 (518)
....+.++++++|.. +...+..+...........+.+.++++.| .+... ....
T Consensus 195 -------~~~~~~~~llk~~~~-------~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~------------~g~~ 248 (400)
T PF03825_consen 195 -------LLGLDALKLLKNPRF-------LVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGST------------IGIL 248 (400)
T ss_pred -------ccchHHHHHhcCccH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhH------------HHHH
Confidence 000011122233221 11222222333333344556677777766 33332 2225
Q ss_pred HHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHH----HHHHHHhcCccce
Q 010112 349 TLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYS----LTFFFANFGPNAT 424 (518)
Q Consensus 349 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 424 (518)
.....+.+++.-+..+++.+|+|.|+++.++.+..++=..++..... +.+....+.. +.+..+.. ....
T Consensus 249 ~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~------~~~~~~~~~~l~q~lhG~tf~~-~~~a 321 (400)
T PF03825_consen 249 WALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSD------PWPFIVALQLLGQLLHGLTFGL-FHAA 321 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcC------CcHHHHHHHHHHHhhhhHHHHH-HHHH
Confidence 55667788888889999999999999999999988888877776531 1122111111 12222222 2345
Q ss_pred eeeccccccchhhhhhHHHHHHHHH-HHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-h
Q 010112 425 TFVVPAEIFPARLRSTCHGISAAAG-KAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-C 502 (518)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~-~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~ 502 (518)
...++.+..|++.|++++++.+... .+|..+|..+.|++.|..+.. ....|...+.+.+++.++..++.. +
T Consensus 322 ~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~-------~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 322 SVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGAR-------GMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcch-------hhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 5678899999999999999988765 599999999999999765521 223455666667766666666655 4
Q ss_pred cccC
Q 010112 503 VPES 506 (518)
Q Consensus 503 ~~~~ 506 (518)
.||+
T Consensus 395 fk~~ 398 (400)
T PF03825_consen 395 FKPK 398 (400)
T ss_pred ccCC
Confidence 4443
No 103
>PRK09669 putative symporter YagG; Provisional
Probab=99.87 E-value=2.8e-20 Score=183.91 Aligned_cols=347 Identities=12% Similarity=0.059 Sum_probs=211.1
Q ss_pred HHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhh----cchhh-HHHHHHHHHHHHHHHhhhc
Q 010112 44 LVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDK----LGRKK-VYGITLILMVISSIASGLS 118 (518)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr----~Grr~-~~~~~~~l~~i~~~~~~~~ 118 (518)
.+.....+++ |++..+.|.+.++..+..++..|+.|+++|| +|||| .++.+.+..+++..+....
T Consensus 31 ~l~~~~t~~~----------gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~ 100 (444)
T PRK09669 31 FLAYFYTDVF----------GLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYT 100 (444)
T ss_pred HHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhC
Confidence 3445566667 9999999999999999999999999999998 78755 4667777777777666656
Q ss_pred cCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 010112 119 FGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAP 197 (518)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~-~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~ 197 (518)
++.+....+..+++..++.+.+.........++.+|+. +++||++..+....+..+|..+++.+...+....+.
T Consensus 101 p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~----- 175 (444)
T PRK09669 101 PDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK----- 175 (444)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 54322233566677777777766667777789999998 568899999999998899988888877666554431
Q ss_pred CCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH-hcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhh
Q 010112 198 PYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR-MRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLS 276 (518)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (518)
.....+|+..+.+.++++++..+.. +..+|.++. . ++++.+..+
T Consensus 176 -----------~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~--~-~~~~~~~~~--------------------- 220 (444)
T PRK09669 176 -----------GDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTP--E-VDNSSSVWK--------------------- 220 (444)
T ss_pred -----------CchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC--C-CcCCCCHHH---------------------
Confidence 0124579988888777766654443 334443211 0 000000000
Q ss_pred hccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhc
Q 010112 277 QRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCST 356 (518)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (518)
..+..++++.+ +.+ ....++..............+.+. .+...+ ..........+..
T Consensus 221 ----~~~~~~~n~~~----~~l---~~~~~~~~~~~~~~~~~~~y~~~~-~~~~~~-----------~~~~~~~~~~i~~ 277 (444)
T PRK09669 221 ----DLKLLLGNSQW----RIM---FIFNVVLLTAVVTRGGATLYYVNY-VLLRPD-----------LATLFLVTGMIAG 277 (444)
T ss_pred ----HHHHHhCCchH----HHH---HHHHHHHHHHHHHHhhhhheeeee-ecCCHH-----------HHHHHHHHHHHHH
Confidence 01111122221 111 111111111111111111212111 111110 1122333445566
Q ss_pred ccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccc--
Q 010112 357 VPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFP-- 434 (518)
Q Consensus 357 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-- 434 (518)
+++.++.+++.||+|+|+.+..+..+.+++.+.+.... .++.+...+. .+..+.......+..+++.+|..+
T Consensus 278 ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~i~g~~~~~~~~~~~am~ad~~d~~ 351 (444)
T PRK09669 278 LFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIP-----PSNVWLIFAL-NILFNFIQNLTTPLQWSMFSDVVDYE 351 (444)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhC-----cchHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 67788899999999999998887765554333222221 1122222222 233333333456778888888875
Q ss_pred -----hhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 010112 435 -----ARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP 469 (518)
Q Consensus 435 -----~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 469 (518)
.+..|...|+.+....+|..+++.+.|.+.+..|-
T Consensus 352 e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 352 EKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred hhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 23456778999999999999999999999987764
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.87 E-value=2.1e-20 Score=184.45 Aligned_cols=378 Identities=12% Similarity=0.046 Sum_probs=229.8
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc-----h
Q 010112 23 TAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG-----R 97 (518)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G-----r 97 (518)
..+.++...++..++.........+.+.+++ |++.++++...++..+...+-.+ +|+++||++ |
T Consensus 26 ~~~~~~~~~y~~qGl~~l~~~~~~~~l~~~l----------g~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rR 94 (468)
T TIGR00788 26 VVLAIGLQVLFVKGIAGLMRLPLSPMLTDDL----------GLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTK 94 (468)
T ss_pred hHHHHHHHHHHHhhHHHHhhhhhhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccc
Confidence 3445555667888887444445566677788 99999999999999999999666 999999998 7
Q ss_pred hhHHHHHHHHHH-HHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhH---HHHHHHHHH
Q 010112 98 KKVYGITLILMV-ISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAF---IAAVFAMQG 173 (518)
Q Consensus 98 r~~~~~~~~l~~-i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~---~~~~~~~~~ 173 (518)
|+.++++.++.+ +.....+..++. .....+.+++.+++.+...++..++..|..+ +++... .+.......
T Consensus 95 r~~l~~~~~l~~~~~~~~l~~~~~~-----~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~ 168 (468)
T TIGR00788 95 RWYLVLSGLLGSAILYGLLPGKVSS-----AKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASA 168 (468)
T ss_pred hHHHHHHHHHHHHHHHHhcccccch-----HHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHH
Confidence 777777777763 443333333442 3444458999999999999999999999998 555443 334444456
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHH
Q 010112 174 FGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQA 253 (518)
Q Consensus 174 lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~ 253 (518)
+|.++++.+++.+.+..+ ||..|++.+.+.++..+...+++|++.. ..++..++.
T Consensus 169 ~G~~vg~~l~G~l~~~~~-----------------------~~~~f~~~a~l~ll~~~~~~~~~E~~~~--~~~~~~~~~ 223 (468)
T TIGR00788 169 TGGLISSLLGGPLLDKTL-----------------------TRILFLITAALLLLQLFVSNLSKERRAF--VRPRIGTYL 223 (468)
T ss_pred HHHHHHHHHHHHHHHhcC-----------------------cchHHHHHHHHHHHHHHHHHhccccccc--ccccccccc
Confidence 899999999999875444 9999999887777665556677886421 000100000
Q ss_pred HHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHH-HHHHHHHhHHhhHHHHHHHhcCCCCC
Q 010112 254 AADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWF-LLDIAFYSQNLFQKDIFSAIGWIPPA 332 (518)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~ 332 (518)
.. ....... ...+...+.-++.++.++++...+ . +.+.++ ...........+. ......|+++..
T Consensus 224 ~~-~~~~~~~------~~~~~~~~~~~~l~~~l~~~~i~~----~--l~fifl~~~~~~~~~~~~f~-~~~~~lG~s~~~ 289 (468)
T TIGR00788 224 EM-NMALLTL------GVLANVKVQILGLRGAIQLLEIAK----P--LIFIFLSYANLPGASGSVFC-ATTQCLPGGPSF 289 (468)
T ss_pred hh-hhhhhhh------hHHHHHHHHHHHHHHHHhcHHHHH----H--HHHHHHHHhhcCCCCceeEE-EEcccCCCCcch
Confidence 00 0000000 000000000001111122221111 1 111111 0000000000000 111236777776
Q ss_pred cchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCC---CchhHHHHH
Q 010112 333 ATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLK---PNRIGFVIM 409 (518)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 409 (518)
.+. ......++.+++..+.+++.+|++.|+.+..+.++.+++.+........++.. .........
T Consensus 290 ~G~------------~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~ 357 (468)
T TIGR00788 290 SGM------------SKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGD 357 (468)
T ss_pred hhh------------HHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeeh
Confidence 544 55556678888888999999999999999988888877765543222122110 111122222
Q ss_pred HHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 010112 410 YSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP 469 (518)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 469 (518)
..+..........+ ...++.+..|++.+|+..++.+++.++|..+++.+.+.+.+..|.
T Consensus 358 ~~l~~~~~g~~~~~-~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~ 416 (468)
T TIGR00788 358 SIIAEVLAQLKFMP-FLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGI 416 (468)
T ss_pred hHHHHHHHHHHHcc-HHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 22333333333333 357888999999999999999999999999999999999977663
No 105
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.87 E-value=1.2e-18 Score=170.00 Aligned_cols=372 Identities=14% Similarity=0.124 Sum_probs=247.5
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHH-HHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccc
Q 010112 68 NVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVY-GITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYP 146 (518)
Q Consensus 68 ~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~-~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 146 (518)
+..++..++..+..++..|+.|.++|+-|+||.+ .....+..+++.++.+.+.. .++...+.-++.-++.+....
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~----~~~~~~~l~iia~v~~~~~~v 145 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPG----QWWLALVLFIIANVGYEASNV 145 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcc----hHHHHHHHHHHHHHHHHHHHH
Confidence 4567889999999999999999999999977664 45555555666666665331 145555555666667777888
Q ss_pred hhhHHhhhhcccccc--------------------------hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCC
Q 010112 147 LSATIMSEYANKKTR--------------------------GAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYS 200 (518)
Q Consensus 147 ~~~~~i~e~~~~~~r--------------------------g~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~ 200 (518)
...+++.|..+++++ ++..+.-.....+|.++.-.+...+....+..
T Consensus 146 fyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~------- 218 (477)
T PF11700_consen 146 FYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST------- 218 (477)
T ss_pred HHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-------
Confidence 899999999999988 99999999999999988888877765443320
Q ss_pred CCCCCCCCCCCCCcchHHHHhhhHHHHH-HHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhcc
Q 010112 201 VDPVGSTAPEADYVWRIVLMVGALPAAL-TYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRD 279 (518)
Q Consensus 201 ~~~~~~~~~~~~~~wr~~f~~~~~~~~~-~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (518)
....+.-|..+.+.++.-++ .+...+++||.|+.. ..++.........++
T Consensus 219 --------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~-~~~~~~~~~~~g~~~-------------------- 269 (477)
T PF11700_consen 219 --------ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPR-PLPSGSSYLRFGFKR-------------------- 269 (477)
T ss_pred --------cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCC-CCCcchhHHHHHHHH--------------------
Confidence 12234568888887776544 455567788876521 111111111111111
Q ss_pred CCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHHHHHHHHHHHHhhccc
Q 010112 280 SNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYKIARAQTLIALCSTVP 358 (518)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (518)
.++.+++.. +.+.+....+.+++..-+......+...+.. .+|+++.+... ..+...+.+++
T Consensus 270 --l~~t~k~~~---~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~------------~~l~~~i~a~~ 332 (477)
T PF11700_consen 270 --LWRTFKEIR---KLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIV------------FGLVVQIVAII 332 (477)
T ss_pred --HHHHHHHHH---hChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHH------------HHHHHHHHHHH
Confidence 111111111 1123344455556555555566666666665 47887765333 66777788889
Q ss_pred chhhhhhhhhhccCh--hHHHHHHHHHHHHHHHHhh--ccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccc
Q 010112 359 GYWFTVAFIDYMGRF--AIQMMGFFFMTVFMFALAI--PYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFP 434 (518)
Q Consensus 359 ~~~~~g~l~dr~g~r--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 434 (518)
|+++.+++.||+|.| +.+........+..+.-.+ ... .....+.+.. .+..+..+....+..+..-++.+|+.|
T Consensus 333 Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~-~~g~~~~~~f-~~~a~~~G~~~G~~qs~sRs~~~~LiP 410 (477)
T PF11700_consen 333 GALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPS-FFGLKSPWEF-WVLAVLIGLFMGGIQSASRSLFSRLIP 410 (477)
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhc-ccCcccHHHH-HHHHHHHHHHhhhHHHHHHHHHHHhCC
Confidence 999999999999998 7766665554222222111 110 0001122333 333333444444567788899999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccCCCCC
Q 010112 435 ARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPESKGRS 510 (518)
Q Consensus 435 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (518)
+++.+...|++...+...+++||.+.|.+.+.+| +.+..+....++.++++++...++..|.+.
T Consensus 411 ~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg------------~~r~g~~~l~~lf~~gl~ll~~v~~~~g~~ 474 (477)
T PF11700_consen 411 PGREAEFFGLYAITGKASSWLGPLLFGLITDATG------------SQRYGFLFLLVLFLIGLILLFFVDVEKGRE 474 (477)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------CchhHHHHHHHHHHHHHHHHhhccchhhhh
Confidence 9999999999999999999999999999998766 567888888899999988888777766554
No 106
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.85 E-value=3.6e-19 Score=163.53 Aligned_cols=408 Identities=12% Similarity=0.066 Sum_probs=267.6
Q ss_pred cchhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc
Q 010112 16 KTQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL 95 (518)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~ 95 (518)
+.-++||.+++++++..+.+++.+..+++........| + +....-|..-+|++.+....+++-|+.||+
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~~Y----------g-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~ 106 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNSFY----------G-SSSAADWLSMIYMVVSVPFGFAAMWILDKF 106 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHHHh----------c-chHHHHHHHHHHHHHHHHHhhHHHHhhccc
Confidence 45577899999999999999999999999988888888 7 777888999999999999999999999999
Q ss_pred chhhHHHHHHHHHHHHHHHhhhccCCchhhHHH--HHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHH
Q 010112 96 GRKKVYGITLILMVISSIASGLSFGKSAKGVIA--TLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (518)
Q Consensus 96 Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~--~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 173 (518)
|-|...+++.++.++|..+-..+....-.+.++ ....+..+.+.++-...........-|++++||..+..+-..+..
T Consensus 107 GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~ 186 (480)
T KOG2563|consen 107 GLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNP 186 (480)
T ss_pred chHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcch
Confidence 999999999999999999877664421111145 778899999998888877777888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchH--HHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccH
Q 010112 174 FGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRI--VLMVGALPAALTYYW-RMRMPETARYTALVAKNA 250 (518)
Q Consensus 174 lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~--~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~ 250 (518)
+|.++|.++...+.....+ ..+..|-. .|+....++.+.+++ .+..++.|+..+......
T Consensus 187 LGvavg~llppilV~~~~~-----------------~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~tPps~s~~~ 249 (480)
T KOG2563|consen 187 LGVAVGFLLPPILVPSSKD-----------------SEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPTPPSASQAA 249 (480)
T ss_pred HHHHHHhhccceecCCCCC-----------------cchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCchhHhh
Confidence 9999999888887643210 12344654 344444443333332 334444443210000000
Q ss_pred HHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCC
Q 010112 251 KQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIP 330 (518)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 330 (518)
++ | ..-.++.+++++++ .+....+.+......+++....+...+.-.|+.+
T Consensus 250 ~~-----------~-----------~~f~~si~~~~~n~-------~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~ 300 (480)
T KOG2563|consen 250 LQ-----------D-----------ASFPKSIKSCFKNR-------QFIILAICYGIGLGLFNSLSTLLNLALCPSGYEG 300 (480)
T ss_pred hh-----------c-----------CcHHHHHHHHHcCc-------cHHHHHHHHhhhHHHHHHHHHHhhhccccccCCc
Confidence 00 0 00000112222222 2333444444444555555555543334445555
Q ss_pred CCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhH-HHHHHHHHHHHHHHHhhccccccCCCchhHHHHH
Q 010112 331 PAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAI-QMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIM 409 (518)
Q Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (518)
...+. ......+++++++.+.|.+.||.++-+. .........++...+..... ......++..
T Consensus 301 ~~aG~------------ig~l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~----~~~~~viv~~ 364 (480)
T KOG2563|consen 301 VFAGY------------IGALMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTL----FLGDSVIVFT 364 (480)
T ss_pred cccch------------hHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhc----cCCceEehhh
Confidence 44333 6677777888899999999999887443 33333333333222221111 1122233444
Q ss_pred HHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCccc-chhHHHH
Q 010112 410 YSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIG-VKNSLIM 488 (518)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g-~~~~~~~ 488 (518)
.....+++..+..|+..-+..|..=|..-++..|+.+..+++-+++-....+...+..+.+ + +...-+.
T Consensus 365 t~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~----------~~~~~~~i~ 434 (480)
T KOG2563|consen 365 TCGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPP----------GNTFPANIF 434 (480)
T ss_pred hHHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCC----------CCCccchhH
Confidence 4445556666778999999999877777889999999999999999999999988644311 2 3333445
Q ss_pred HHHHHHHHHHHHhhcccC
Q 010112 489 LGVVNFVGMICTLCVPES 506 (518)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~ 506 (518)
+...++++.++..++++.
T Consensus 435 ~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 435 LTVSALLGAILVAFFRPD 452 (480)
T ss_pred hHHHHHHHHHHHhhhhhh
Confidence 555556666655555443
No 107
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.84 E-value=5e-19 Score=176.04 Aligned_cols=345 Identities=10% Similarity=-0.022 Sum_probs=204.6
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhh----hcch-hhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhh
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGD----KLGR-KKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLG 138 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~d----r~Gr-r~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (518)
+++...+|.+..+..+.-++..|+.|+++| |+|| |+.++.+.+..+++..++...++......+..+++..++.+
T Consensus 38 Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~ 117 (473)
T PRK10429 38 GLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWG 117 (473)
T ss_pred CCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999 6698 55577788888887666654443211112455666777778
Q ss_pred hccccccchhhHHhhhhc-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchH
Q 010112 139 FGIGGDYPLSATIMSEYA-NKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRI 217 (518)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~-~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~ 217 (518)
++.........++..|.. +++||.+..++...+.++|..+.+.+...+....+.. ....+|+.
T Consensus 118 ~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~----------------~~~~g~~~ 181 (473)
T PRK10429 118 MTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGG----------------DRGFGFQM 181 (473)
T ss_pred HHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------chhhhHHH
Confidence 888888888999999999 5899999999877777787777666655544433310 12346888
Q ss_pred HHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhh
Q 010112 218 VLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGL 296 (518)
Q Consensus 218 ~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (518)
...+.+++.++..+. .+..+|.++.. ..+.++ +++.+.++.++....++
T Consensus 182 ~~~i~~~~~~~~~~~~~~~~~e~~~~~--~~~~~~-------------------------~~~~~~~~~~~~~~~n~--- 231 (473)
T PRK10429 182 FTLVLIAFFIVSTIITLRNVHEVYSSD--NQVSAE-------------------------GSHLTLKDIVALIYKND--- 231 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCceecCCcc--cccccc-------------------------ccCCCHHHHHHHHhcCH---
Confidence 777776666654443 33456643210 000000 00001111111111111
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ 376 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 376 (518)
.+.......+......+....+.+.+.+....++. ..........+..+++.++.+++.||+|+|+.+
T Consensus 232 ~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~------------~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~ 299 (473)
T PRK10429 232 QLSCLLGMALAYNIASNIINGFAIYYFTYVIGDAD------------LFPYYLSYAGAANLVTLILFPRLVKSLSRRILW 299 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHH------------HHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 11222222222222333222233323222111100 111233344466677888899999999999998
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccc-------hhhhhhHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFP-------ARLRSTCHGISAAAG 449 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~ 449 (518)
..+..+..++.+.+..... . ...+.+..++.. +..+.......+..+++.+|..+ .+..|...|..++..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~i~~-~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~ 376 (473)
T PRK10429 300 AGASIFPVLSCGVLLLMGL-A-APHNALLIVIAG-ILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVV 376 (473)
T ss_pred HHHHHHHHHHHHHHHHHhc-c-CchhHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHH
Confidence 8877765555444332110 0 011222222222 22222222334566777888855 344566899999999
Q ss_pred HHHHHHHHhhhHhhhhcCCC
Q 010112 450 KAGAIVGAFGFLYAAQSKDP 469 (518)
Q Consensus 450 ~~g~~~~~~~~g~l~~~~~~ 469 (518)
.++..+++.+.|.+.+..|.
T Consensus 377 K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 377 KGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred HHHHHHHHHHHHHHHHHcCC
Confidence 99999999999999987764
No 108
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.84 E-value=1.1e-18 Score=171.64 Aligned_cols=347 Identities=14% Similarity=0.089 Sum_probs=233.2
Q ss_pred HHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhh----hcchhhH-HHHHHHHHHHHHHHhhhc
Q 010112 44 LVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGD----KLGRKKV-YGITLILMVISSIASGLS 118 (518)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~d----r~Grr~~-~~~~~~l~~i~~~~~~~~ 118 (518)
...+...+.. ++++...|.+..+..+-.++..|+.|.++| |+||||. ++.+.++.+++..++...
T Consensus 23 ~~~~f~~~~~----------gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~ 92 (428)
T PF13347_consen 23 YLLYFYTDVL----------GLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSP 92 (428)
T ss_pred HHHHHHHHHc----------CCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhcc
Confidence 4455566666 999999999999999999999999999999 8998776 667888888888887766
Q ss_pred -c-CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 010112 119 -F-GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFK 195 (518)
Q Consensus 119 -~-~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~ 195 (518)
+ +.+....+..+.+.-++..++.........++..|..+ +++|.+..+.-..+..+|.++...+...+.+..+.
T Consensus 93 ~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~--- 169 (428)
T PF13347_consen 93 PPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGG--- 169 (428)
T ss_pred ccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhcc---
Confidence 4 21111124456777777799999999999999999998 57899999999999999998888888777766553
Q ss_pred CCCCCCCCCCCCCCCCC-CcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhh
Q 010112 196 APPYSVDPVGSTAPEAD-YVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVA 273 (518)
Q Consensus 196 ~~~~~~~~~~~~~~~~~-~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (518)
... .+|++..++.+++.++..+. .+..+|.++.. .++
T Consensus 170 --------------~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~--~~~------------------------- 208 (428)
T PF13347_consen 170 --------------GDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEV--TEQ------------------------- 208 (428)
T ss_pred --------------CccchHHHHHHHHHHHHHHHHhhhhhheeeeccccc--ccc-------------------------
Confidence 122 37999999988887776555 45567621110 000
Q ss_pred hhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHH
Q 010112 274 KLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIA 352 (518)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (518)
+++.+.++.++.....+..+.+ ....++............+.+.+. .+.. . .........
T Consensus 209 ---~~~~~~~~~~~~~~~nr~~~~l---~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~------------~~~~~~~~~ 269 (428)
T PF13347_consen 209 ---EKKISLRDSLRSLFRNRPFRIL---LLAFFLQWLAFALMNTFLPYYFTYVLGNE-G------------LISIFMLIF 269 (428)
T ss_pred ---ccccccccchhhhcccchHHHH---HHHHHHHHhhhhhhhhHHHHHHHHHhcCc-h------------hhHHHHHHH
Confidence 0011112222222212211222 222222222222233333444443 2222 1 112244556
Q ss_pred HhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccc
Q 010112 353 LCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEI 432 (518)
Q Consensus 353 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (518)
.+..+++.++.++++||+|+|+.+..+..+.+++.+.+.+... .+.+...+. .+..+..........+++.+|.
T Consensus 270 ~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~i~-~~l~gi~~~~~~~~~~a~~ad~ 343 (428)
T PF13347_consen 270 FVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGP-----GSPWLVLIL-FILAGIGYGAFFVIPWAMLADV 343 (428)
T ss_pred HHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHh-----hhHHHHHHH-HHHhHhhhcccccccccccccc
Confidence 6777788889999999999999999999999888887766541 123333333 3333333444567888899998
Q ss_pred cch-------hhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 010112 433 FPA-------RLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP 469 (518)
Q Consensus 433 ~p~-------~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 469 (518)
.+. +..|...|+.++...++..+++.+.+.+.+..|-
T Consensus 344 id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 344 IDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 763 3468899999999999999999999999887664
No 109
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.83 E-value=5.2e-19 Score=165.80 Aligned_cols=377 Identities=12% Similarity=0.096 Sum_probs=220.9
Q ss_pred HhhhhhhhHHHHHHHhhhh-hhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHH--
Q 010112 32 FFTDAYDLFCISLVTKLLG-RIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILM-- 108 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~-- 108 (518)
++...+..+..-+..+..- ++- |+|.+++|.+.++..+...+.+|+.|.++||+|.||-++..+...
T Consensus 16 ~f~~Ff~~gi~~pF~~iWL~~~~----------GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~ 85 (412)
T PF01306_consen 16 YFFYFFIWGIFLPFFPIWLTQVA----------GLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLL 85 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcccc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHH
Confidence 4444444555555555544 346 999999999999999999999999999999999777654333222
Q ss_pred HHHHHH-hhhc----cCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 010112 109 VISSIA-SGLS----FGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVA 183 (518)
Q Consensus 109 ~i~~~~-~~~~----~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~ 183 (518)
..+... ..+. .|. +...+++-+..|++.....|+.-+++.++. ++.+.=.|-.-...++|.+++..++
T Consensus 86 l~~pff~~v~~pll~~n~-----~lg~iig~i~l~~~f~~~~~~~Ea~~er~s--r~~~feYG~~R~wGSig~ai~s~~~ 158 (412)
T PF01306_consen 86 LFGPFFIYVFGPLLQSNF-----WLGAIIGGIYLGLVFNAGVPLSEAYAERVS--RRNGFEYGRARMWGSIGFAIASLLA 158 (412)
T ss_dssp TCHHHHHHTHHHHHHTT------HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--HHHSS-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHcccchHHHHHHHHHH--HHhcCCcchHHHHhhHHHHHHHHHh
Confidence 222222 1222 221 223344444555555555666666666555 3345556667788889999999999
Q ss_pred HHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHh-cCCCCcchhhhhhccHHHHHHHHHHHHh
Q 010112 184 LIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRM-RMPETARYTALVAKNAKQAAADMSKVLQ 262 (518)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~-~~~esp~~~~~~~~~~~~~~~~~~~~~~ 262 (518)
|.+.+..+ +..||+....+++..++.. ..|+.++.....+.+.++..+
T Consensus 159 G~L~~i~p------------------------~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~~~~------- 207 (412)
T PF01306_consen 159 GILFNINP------------------------NIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAKKDK------- 207 (412)
T ss_dssp HHHHHHHH------------------------HHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS-----------
T ss_pred heeeeeCc------------------------cHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccCCCC-------
Confidence 98875322 3677776555554444433 334433321010000000000
Q ss_pred hhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHH
Q 010112 263 VELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVY 342 (518)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 342 (518)
...++..++++.+ .+|...+........|.......+.++... +.... ...
T Consensus 208 --------------~~~~~~~~l~k~~-------~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~-f~~~~-------~g~ 258 (412)
T PF01306_consen 208 --------------VSLKDVLSLFKMR-------NFWFFVLFVIGVAAIYDVFDQQFPIYFASF-FQSAG-------QGN 258 (412)
T ss_dssp ----------------HHHHHHHTTSH-------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-SSSHH-------HHH
T ss_pred --------------CcHHHHHHHhcch-------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcccc-------cCh
Confidence 0000111222222 233333333333344554443445554442 22111 111
Q ss_pred HHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCcc
Q 010112 343 KIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPN 422 (518)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (518)
..-+.......+..++...+..++.+|+|.|+.++++..++.+=..+.++.. +.+....+=.+...-.... .
T Consensus 259 ~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~-------~~~~i~~~klLH~~e~~l~-l 330 (412)
T PF01306_consen 259 QMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFAT-------NPWVISLIKLLHALEFPLL-L 330 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT---------SHHHHHHHHHHHHHHHHHH-H
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhc-------chHHHHHHHHHHHHHHHHH-H
Confidence 1223356667778888888999999999999999999999999888887766 3444444434433333332 2
Q ss_pred ceeeeccccccchhhhhhHHHHH-HHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 423 ATTFVVPAEIFPARLRSTCHGIS-AAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 423 ~~~~~~~~~~~p~~~~~~~~g~~-~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
....-++.+.+|++..++...+. +...+++.++.+.+.|.+. |+.|++.+|++++.+.++..++..
T Consensus 331 va~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~ly-------------d~~G~~~tylimg~iv~~~~li~~ 397 (412)
T PF01306_consen 331 VAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLY-------------DRIGFQHTYLIMGLIVLPFTLISA 397 (412)
T ss_dssp HHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhH-------------hhcCcHHHHHHHHHHHHHHHHHhe
Confidence 33456889999999999999886 5667899999999999998 678999999999988887777766
Q ss_pred -hcccC
Q 010112 502 -CVPES 506 (518)
Q Consensus 502 -~~~~~ 506 (518)
.++++
T Consensus 398 f~l~~~ 403 (412)
T PF01306_consen 398 FTLKKD 403 (412)
T ss_dssp HHS--S
T ss_pred eeecCC
Confidence 44433
No 110
>PRK11462 putative transporter; Provisional
Probab=99.81 E-value=3.3e-17 Score=161.77 Aligned_cols=335 Identities=10% Similarity=0.000 Sum_probs=199.9
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhh----cchhhH-HHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhh
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDK----LGRKKV-YGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLG 138 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr----~Grr~~-~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (518)
++++..+|.+..+.-+--++..|+.|.++|| +||||. ++++.+..+++..++...++.+....+..+.+.-++..
T Consensus 41 Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~ 120 (460)
T PRK11462 41 GIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLT 120 (460)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHH
Confidence 9999999999999999999999999999995 688765 56677888888777665553222222455666777778
Q ss_pred hccccccchhhHHhhhhcc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchH
Q 010112 139 FGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRI 217 (518)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~-~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~ 217 (518)
++.......-.++..|..+ ++||++..++...+..+|..+++.+...+....+.. ....+|+.
T Consensus 121 ~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~----------------~~~~g~~~ 184 (460)
T PRK11462 121 LLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGD----------------NKPLGFQG 184 (460)
T ss_pred HHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------chhhhHHH
Confidence 8888888888999999997 789999999999999999988888877666554420 12346888
Q ss_pred HHHhhhHHHHHHHHHH-hcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhh
Q 010112 218 VLMVGALPAALTYYWR-MRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGL 296 (518)
Q Consensus 218 ~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (518)
...+.+++.+++.+.. ...+|.++. .+++ . +.++.++....++.++
T Consensus 185 ~~~i~~ii~~i~~~i~~~~~kE~~~~--~~~~--~-----------------------------~~~~~l~~~~~Nk~~~ 231 (460)
T PRK11462 185 GIAVLSVVAFMMLAFCFFTTKERVEA--PPTT--T-----------------------------SMREDLRDIWQNDQWR 231 (460)
T ss_pred HHHHHHHHHHHHHHHHHhcceeccCC--CccC--C-----------------------------CHHHHHHHHhCChHHH
Confidence 7777777665554433 334553321 0000 0 0011111111112112
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ 376 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 376 (518)
.+....+..........+...|...+. .+ ... ..........+..+++.++++++.||+++|+..
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~y~~~y~--~g--~~~-----------~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~ 296 (460)
T PRK11462 232 IVGLLTIFNILAVCVRGGAMMYYVTWI--LG--TPE-----------VFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF 296 (460)
T ss_pred HHHHHHHHHHHHHHHHHhHhhhhhhhh--cC--ChH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH
Confidence 222121122121112222222222221 11 100 111234455566777888999999999999887
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccc-------hhhhhhHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFP-------ARLRSTCHGISAAAG 449 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~ 449 (518)
..+..+..+..+++.+.. ..+.....+...+.+ .......++.+++..|..+ .+..|...+..+...
T Consensus 297 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~g-~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~ 370 (460)
T PRK11462 297 WWTNALLAVISLAMFFVP-----MQASITMFVFIFVIG-VLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVL 370 (460)
T ss_pred HHHHHHHHHHHHHHHHhc-----hhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHH
Confidence 655544433333322221 111112222222222 2223334555667777755 333455567777888
Q ss_pred HHHHHHHHhhhHhhhhcCC
Q 010112 450 KAGAIVGAFGFLYAAQSKD 468 (518)
Q Consensus 450 ~~g~~~~~~~~g~l~~~~~ 468 (518)
.+|..+++.+.|.+.+..|
T Consensus 371 Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 371 KLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHcC
Confidence 9999999999999987655
No 111
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.81 E-value=3.8e-17 Score=154.74 Aligned_cols=377 Identities=13% Similarity=0.075 Sum_probs=246.8
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhh----cchhhH-HHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhh
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDK----LGRKKV-YGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLG 138 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr----~Grr~~-~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (518)
|+++...|.+..+.-+--++.-|+.|.+.|| +||||. ++.+.+..++.+.++-.+++.+....+...++.-.+.+
T Consensus 44 Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~ 123 (467)
T COG2211 44 GLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLG 123 (467)
T ss_pred CCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHH
Confidence 9999999999999999999999999999995 787655 77888999999999988886443333677778888999
Q ss_pred hccccccchhhHHhhhhcc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchH
Q 010112 139 FGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRI 217 (518)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~-~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~ 217 (518)
++.......-.++..|..+ ++||.+..+.-+.+.++|..+...+...+....+.. +...||+.
T Consensus 124 l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~----------------~~~~g~~~ 187 (467)
T COG2211 124 LGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGG----------------DKALGYQG 187 (467)
T ss_pred HHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC----------------cchhhHHH
Confidence 9999999999999999885 689999999999999999999888888888777741 23678998
Q ss_pred HHHhhhHHHHHHHHHH-hcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhh
Q 010112 218 VLMVGALPAALTYYWR-MRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGL 296 (518)
Q Consensus 218 ~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (518)
..++.++++++..++. +-.+|.+.. .++.+. +.+.+..+.+.....+++++
T Consensus 188 ~~~~~~vi~~i~~l~~~~~v~ER~~~--~~~~~~--------------------------~~~~~~~~~~~~~~~Nrp~~ 239 (467)
T COG2211 188 TALVLGVIGVILLLFCFFNVKERVVE--TQPTKT--------------------------GVKLKLKDSFLLIFKNRPLL 239 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCc--cccCcc--------------------------cccccHHHHHHHHHccchHH
Confidence 8888888777766554 345665431 000000 00001111111111112111
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ 376 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 376 (518)
.. +...++.............++.+ ...+..+ ...........++.+++.++..++.+|+|+|+.+
T Consensus 240 ~~---l~~~l~~~~~~~i~~s~~~yy~~-y~lg~~~----------l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~ 305 (467)
T COG2211 240 LL---LLMNLLLFIAFNIRGSIMVYYVT-YVLGDPE----------LFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF 305 (467)
T ss_pred HH---HHHHHHHHHHHHHHhhhhheeEE-EEcCChH----------HHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH
Confidence 11 11222222222211122222211 1111111 1233355555666666688899999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccc-------hhhhhhHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFP-------ARLRSTCHGISAAAG 449 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-------~~~~~~~~g~~~~~~ 449 (518)
..+.++..++.+++.+... +....+++..+....+.....++.|++.+|..+ .+..|...|...++.
T Consensus 306 ~~~~~~~~i~~~~~~f~~~------~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~ 379 (467)
T COG2211 306 LIGLLLLAVGYLLLYFTPA------GSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFR 379 (467)
T ss_pred HHHHHHHHHHHHHHHhhcC------cchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHH
Confidence 9999999888888776652 334444455445455555578899999999864 344588889999999
Q ss_pred HHHHHHHHhhhHhhhhcCCCCcCCCCCC--CcccchhHHHHH-HHHHHHHHHHHhhcc
Q 010112 450 KAGAIVGAFGFLYAAQSKDPTKRDAGYP--AGIGVKNSLIML-GVVNFVGMICTLCVP 504 (518)
Q Consensus 450 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~--~~~g~~~~~~~~-~~~~~~~~~~~~~~~ 504 (518)
-+|..++..+.|++.+..|-.+...+.+ ...|.+..+.+. +++.+++++...+.|
T Consensus 380 K~g~ala~~~~g~~L~~~Gyv~~~~~Q~~~al~gI~~~~~~~Pa~l~l~~~i~~~~y~ 437 (467)
T COG2211 380 KLGLALAGFIPGWILGAIGYVPNVSAQSASALFGIRFLFIILPALLLLLAAIIIFFYK 437 (467)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999998777433221111 112444444444 334444444444444
No 112
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.80 E-value=6.5e-19 Score=166.95 Aligned_cols=414 Identities=16% Similarity=0.157 Sum_probs=245.9
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 010112 17 TQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG 96 (518)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G 96 (518)
.++.+|+.+.++.+..++.+....++.+..-...++. |.+.+.+..|++.++..+|.+++++..|+...|.+
T Consensus 28 ~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~l--------D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~ 99 (488)
T KOG2325|consen 28 ERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQKL--------DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTG 99 (488)
T ss_pred ccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhhc--------CCCCCcchhhHHHHHHHHHHHhcchhhcccccccC
Confidence 3456678788888888887777655544322222222 33788899999999999999999999999999999
Q ss_pred h-hhHHHHHHHHHHHHHHHh-hhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHH
Q 010112 97 R-KKVYGITLILMVISSIAS-GLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF 174 (518)
Q Consensus 97 r-r~~~~~~~~l~~i~~~~~-~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~l 174 (518)
+ |+.++.|.++..+++++. .+... ..++-+.++++|++.|+|.|. .....+|+++....++|.++++....+..+
T Consensus 100 ~~k~Pli~s~ii~~~g~llY~~l~~~--~~~~~y~mL~~R~l~Gvg~~n-~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vl 176 (488)
T KOG2325|consen 100 SVKKPLIVSFLIAIIGNLLYLALAYV--PNGVKYLMLVARILTGVGVGN-FAVLRAYIADASTVEDRPRAFAATSGGFVL 176 (488)
T ss_pred CcccCHHHHHHHHHHHHHHHHHHHhc--ccchHHHHHHHHHHcCcCccc-HHHHHHHHHhccCccchHHHHHHhhhHHHH
Confidence 7 888999999999999988 33221 111368899999999998775 588999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccCCCCCC-CCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHH
Q 010112 175 GILAGGIVALIVSSAFDHHFKAPP-YSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQ 252 (518)
Q Consensus 175 G~~lg~~l~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~ 252 (518)
|..+||.++..+............ ... .-+-.+-|+.++..++.+++ .++++|.++.. .+++.++
T Consensus 177 g~ilGp~~q~~f~~Lg~~G~~i~~~~~~-----------n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~--~~~~~~~ 243 (488)
T KOG2325|consen 177 GIILGPTIQLAFTPLGEKGFMILPGLIF-----------NMYTAPAWLMAILWIIYIVIILFFFKEVYRGI--IDKKKRS 243 (488)
T ss_pred HHHHhHHHHHHHhhhcCCceEEcCcceE-----------EecchHHHHHHHHHHHHHHHHHhheeecccCc--ccccccc
Confidence 999999999888643321100000 000 11345667777777776554 45677766531 1111000
Q ss_pred HHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhH-HhhHHHHHHHhcCCCC
Q 010112 253 AAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQ-NLFQKDIFSAIGWIPP 331 (518)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~ 331 (518)
. +++..+.++ .+.+ +..+...+.+.+..+.....+... ....+.....++|+.+
T Consensus 244 ~------------~~~~~~~~~-----------~~~~--~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~ 298 (488)
T KOG2325|consen 244 V------------EEEKSDIEK-----------VKKP--KLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGS 298 (488)
T ss_pred c------------hhhccchhh-----------hccC--ChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccc
Confidence 0 000000000 0111 112234455555566665566553 3444455555777766
Q ss_pred CcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhh-hhccChhHHHHHHHHHHHHHHHHhhccccccCC----------
Q 010112 332 AATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFI-DYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLK---------- 400 (518)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~-dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 400 (518)
+... .........++..+...+...+.. .++.+|+.+..+.++...+..+...+......+
T Consensus 299 ~av~--------~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~ 370 (488)
T KOG2325|consen 299 EAVL--------YNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAG 370 (488)
T ss_pred hHHH--------hhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccC
Confidence 5322 111122222222222222222222 344556666666555555554443322111000
Q ss_pred --------------CchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhc
Q 010112 401 --------------PNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQS 466 (518)
Q Consensus 401 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~ 466 (518)
.+.+.+.....+..+...-.......++-+|+..|+.++++.|+.......+..++|.+...+..
T Consensus 371 ~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~- 449 (488)
T KOG2325|consen 371 CDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFT- 449 (488)
T ss_pred cCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHH-
Confidence 00111111111111111111122344566888899999999999999999999999999888873
Q ss_pred CCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 467 KDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 467 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
..|++..+.+.+...++.....
T Consensus 450 ------------~~g~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 450 ------------LSGPRPVWIILLCLLLVVAALW 471 (488)
T ss_pred ------------hcCccHHHHHHHHHHHHHHHHH
Confidence 4466666665555544444433
No 113
>PRK09848 glucuronide transporter; Provisional
Probab=99.80 E-value=4.2e-17 Score=161.57 Aligned_cols=340 Identities=10% Similarity=-0.006 Sum_probs=189.3
Q ss_pred HHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc----chhhHH-HHHHHHHHHHHHHhhhcc
Q 010112 45 VTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL----GRKKVY-GITLILMVISSIASGLSF 119 (518)
Q Consensus 45 ~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~----Grr~~~-~~~~~l~~i~~~~~~~~~ 119 (518)
+.+.+.+.. +++..++|.+.+...+..++..++.|+++||. ||||.. ..+.+...+...+....+
T Consensus 31 l~~y~~~~~----------gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~ 100 (448)
T PRK09848 31 LLSYYTDVA----------GVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVP 100 (448)
T ss_pred HHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCc
Confidence 444566667 89999999999999999999999999999996 777754 556555554444432222
Q ss_pred -CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhccc-ccchhHHHHHHHHHHH-----HHHHHHHHHHHHHhhccc
Q 010112 120 -GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANK-KTRGAFIAAVFAMQGF-----GILAGGIVALIVSSAFDH 192 (518)
Q Consensus 120 -~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-~~rg~~~~~~~~~~~l-----G~~lg~~l~~~l~~~~~~ 192 (518)
.......+..+++.-++.+++.+...+...++..|..+. ++|.+..+.-..+.++ +..++|.++.. .+.
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~----~g~ 176 (448)
T PRK09848 101 TDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNS----SPE 176 (448)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----CCC
Confidence 110001133445556677888888887777877776654 6788887766654443 33344444332 110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhH
Q 010112 193 HFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDK 271 (518)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (518)
....+|.....+.++++++..++ ....||+++. +.++ ....+
T Consensus 177 -----------------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~---~~~~-~~~~~---------------- 219 (448)
T PRK09848 177 -----------------EMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVR---IVAQ-PSLKI---------------- 219 (448)
T ss_pred -----------------chhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCC---CccC-CCHHH----------------
Confidence 00111222222223333332222 2334554321 0000 00000
Q ss_pred hhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHH
Q 010112 272 VAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTL 350 (518)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~ 350 (518)
..+..++++. +.......++....+.......+.++++ .+.++ ..+.+...
T Consensus 220 ---------~~~~l~~n~~-------f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~------------~~~~~~~~ 271 (448)
T PRK09848 220 ---------SLQTLKRNRP-------LFMLCIGALCVLISTFAVSASSLFYVRYVLNDTG------------LFTVLVLV 271 (448)
T ss_pred ---------HHHHHhCCch-------HHHHHHHHHHHHHHHHHHhhhheeeEeeecCChH------------HHHHHHHH
Confidence 0111222222 1222222233333333333344444332 22211 12222334
Q ss_pred HHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccc
Q 010112 351 IALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPA 430 (518)
Q Consensus 351 ~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (518)
...++.+++.++.+++.||+|+|+.+..+..+..++.+.+.+... .+.+. .....+..+.+.....+..+++..
T Consensus 272 ~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~-----~~~~~-~~~~~~l~g~G~~~~~~~~~al~~ 345 (448)
T PRK09848 272 QNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSV-----WSLPV-ALVALAIASIGQGVTMTVMWALEA 345 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCc-----hhHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556778888999999999999999998887777666554321 12222 222222223333334556667777
Q ss_pred cccchh-------hhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 010112 431 EIFPAR-------LRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP 469 (518)
Q Consensus 431 ~~~p~~-------~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 469 (518)
|..|.+ .+|...|+.++...+|..+++.+.+.+.+..|.
T Consensus 346 ~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 346 DTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 776643 469999999999999999999999999876653
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.78 E-value=1.8e-17 Score=151.85 Aligned_cols=378 Identities=13% Similarity=0.097 Sum_probs=242.6
Q ss_pred CCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhH-HHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 65 LPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKV-YGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 65 ~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~-~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
-+.+..+...++..+..++.+|+.|.++|+.|+||. +-+...+..++..+..++++- ..++..++.-.+..++...
T Consensus 55 ~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~---s~~~~~l~~~il~~i~~~~ 131 (438)
T COG2270 55 SSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPG---SYLLLLLLFLILASIGFEF 131 (438)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCC---chHHHHHHHHHHHHHhcch
Confidence 445688999999999999999999999999996665 556666666677777777661 1167777788888999999
Q ss_pred ccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC-CCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFK-APPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
......+++.+..++++-++..++-.....+|..+.-+..-...-..+.... ..-..++ +.+...-|..+.+.
T Consensus 132 s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~------~~~~~~~ri~~~l~ 205 (438)
T COG2270 132 SNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLP------PADGEDVRITGLLA 205 (438)
T ss_pred hheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccC------ccccccchhHHHHH
Confidence 9999999999999999999988887777777776665554222211110000 0000000 01233467778777
Q ss_pred hHHHHHH-HHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHH
Q 010112 223 ALPAALT-YYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGT 301 (518)
Q Consensus 223 ~~~~~~~-~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (518)
++-.++. +.+++..||.++- ..+..+...+..++. ++-+++.+.+++ +...
T Consensus 206 A~W~li~~iPm~~~v~~~~~~---~~~~~~~l~~g~k~L----------------------~~t~k~i~~~~~---i~~F 257 (438)
T COG2270 206 ALWWLLFALPMILNVHDAEKI---SSPPPTALRNGFKEL----------------------KSTFKEIRGRKN---LVLF 257 (438)
T ss_pred HHHHHHHHhHHHhcccccccc---cccchHHHHHHHHHH----------------------HHHHHHHhcccc---hHHH
Confidence 7665544 4445556665431 000101111111100 011112222221 1222
Q ss_pred HHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHH
Q 010112 302 TSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGF 380 (518)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 380 (518)
...++...-+..+...+...+.. .+|++..+... ......+..++|++++|++.||+|.|+++..+.
T Consensus 258 LiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll------------~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~l 325 (438)
T COG2270 258 LIARFFYIDGVNTILAMGGVFGAADLGLSSTELLL------------IGIALSVVAALGAIIAGFLDERFGSKPVLMIGL 325 (438)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCCceeehHHH
Confidence 22333332233344444445544 46776665333 566667788889999999999999999988888
Q ss_pred HHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 010112 381 FFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGF 460 (518)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 460 (518)
++..+..+...... ....+.+ ..+..+....+.....-++..+.+|+++.++..|+++..+...++++|.+.
T Consensus 326 vi~~~~~~~~~~~~-------~~~~f~i-~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 326 VILSIAALYLIFLE-------GELDFWI-LGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred HHHHHHHHHHHHcc-------ccHHHHH-HHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 77766665554443 1222222 223333333445667788999999999999999999999999999999999
Q ss_pred HhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccCCCCCh
Q 010112 461 LYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPESKGRSL 511 (518)
Q Consensus 461 g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (518)
+.+.+.+| +-+..+..+.++.+++.+.....|+.++++.
T Consensus 398 ~v~t~iTg------------~~r~g~~~i~vll~iGl~~L~~v~~~~~~~~ 436 (438)
T COG2270 398 AVITQITG------------SSRAGVLSIIVLLLIGLLLLLRVKVPGRREA 436 (438)
T ss_pred HHHHHHhc------------chhhHHHHHHHHHHhhHhhEEeecCCCCccc
Confidence 99998777 4567778888888888887777777655443
No 115
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.77 E-value=4e-17 Score=152.15 Aligned_cols=289 Identities=13% Similarity=0.033 Sum_probs=181.5
Q ss_pred HHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCC
Q 010112 127 IATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGS 206 (518)
Q Consensus 127 ~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~ 206 (518)
++.++++-++.|.|.+...+....++++..|++++.+.+++.+..+++|..++|.+++.+....... .+.+ ..
T Consensus 10 ~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~-----~~~~--~~ 82 (310)
T TIGR01272 10 YVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGD-----LSMQ--VA 82 (310)
T ss_pred HHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcc-----hhhh--hh
Confidence 8999999999999999999999999999999999999999999999999999999999887432100 0000 00
Q ss_pred CCCCCCCcchHHHHhhhHHHHHHHHHHhc--CCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCccc
Q 010112 207 TAPEADYVWRIVLMVGALPAALTYYWRMR--MPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFG 284 (518)
Q Consensus 207 ~~~~~~~~wr~~f~~~~~~~~~~~~~~~~--~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (518)
..+.....|+++|++.+.+.++..+.+.+ +||.++. +.++.. + ++..+
T Consensus 83 ~~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~------~~~~~~-------------~--------~~~~~--- 132 (310)
T TIGR01272 83 TANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEA------DVARVS-------------S--------GDTTQ--- 132 (310)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcc------cccccc-------------c--------ccccc---
Confidence 00001145999999766554444333333 3543211 000000 0 00000
Q ss_pred chhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHH---hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchh
Q 010112 285 LFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSA---IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYW 361 (518)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (518)
+++..++ +..+...+..++......+...|.+.|+.+ .|+++.+ +.........+.++|++
T Consensus 133 --~~~~~~~--~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~------------a~~~~s~~~~~~~iGr~ 196 (310)
T TIGR01272 133 --KTSAFQF--THLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQ------------AAHFTAYTWGGAMVGRF 196 (310)
T ss_pred --hhhHHhh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHH------------HHHHHHHHHHHHHHHHH
Confidence 0111111 122333444444444556667788888864 2555443 33367777778889999
Q ss_pred hhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhH
Q 010112 362 FTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTC 441 (518)
Q Consensus 362 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 441 (518)
+++++.||+++|+.+..+..+.+++.++..... ..... ....+.+ ++.....|...+...+..|++ .+++
T Consensus 197 ~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~-------~~~~~-~~~~l~g-~~~s~i~P~~~s~a~~~~~~~-~~~a 266 (310)
T TIGR01272 197 IGSAVMPMISQGRYLAFNAFLAVLLSIGAALTH-------GYVAM-WFVLALG-LFNSIMFPTIFSLALNALGRH-TSQG 266 (310)
T ss_pred HHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcC-------CHHHH-HHHHHHH-HHHHHHHHHHHHHHHhhhhhh-hhhh
Confidence 999999999999988887777766654443322 11112 2222233 333335677777777776654 5667
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHH
Q 010112 442 HGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVV 492 (518)
Q Consensus 442 ~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 492 (518)
.++. ..+.+|+.+.|.+.|.+.| ..|.+.++++...+
T Consensus 267 sai~-~~~~~Gg~i~P~l~G~lad-------------~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 267 SGIL-CLAIVGGAIVPLLQGSLAD-------------CLGIQLAFALPVPC 303 (310)
T ss_pred HHHH-HHHHhcchHHHHHHHHHHH-------------hccchHHHHHHHHH
Confidence 7775 5678999999999999984 45666666644333
No 116
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.76 E-value=1.6e-16 Score=156.95 Aligned_cols=406 Identities=13% Similarity=0.145 Sum_probs=265.9
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHH
Q 010112 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGI 103 (518)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~ 103 (518)
.+.+.++..+.+++....+...+..+.+.| +++..+.|++.+.+-++..+...+..+..-|.-|-|.+-.
T Consensus 98 fl~~l~~~~~~q~l~~~y~~s~IttiErRF----------~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~ 167 (735)
T KOG3626|consen 98 FLVLLSLAAFAQGLYVGYFNSVITTIERRF----------KISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGI 167 (735)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhhc----------CCCCCcceeEeeecccchhhhhHhHHHhccccCccceeee
Confidence 445556667778877788888899999999 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhcc----CCc----------------------------------------hhh--HHHHHHHHHHHh
Q 010112 104 TLILMVISSIASGLSF----GKS----------------------------------------AKG--VIATLCFFRFWL 137 (518)
Q Consensus 104 ~~~l~~i~~~~~~~~~----~~~----------------------------------------~~~--~~~~l~~~r~l~ 137 (518)
|.++++++++++++-+ .|. ..+ .+..++++.++.
T Consensus 168 G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~ 247 (735)
T KOG3626|consen 168 GLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLL 247 (735)
T ss_pred chhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHh
Confidence 9999999999987630 000 001 245788899999
Q ss_pred hhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCC--cc
Q 010112 138 GFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADY--VW 215 (518)
Q Consensus 138 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~w 215 (518)
|+|....++...+|+-|...+++-+..+|++.....+|.++|.++++++........ ..+..+++ .+..| .|
T Consensus 248 GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~-~~~~~it~-----~DPrWIGAW 321 (735)
T KOG3626|consen 248 GIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFG-LSPIGITP-----TDPRWIGAW 321 (735)
T ss_pred hcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccc-cCCCCCCC-----CCcchhhHH
Confidence 999999999999999999999999999999999999999999999999987665321 01111111 12222 47
Q ss_pred hHHHHhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhh
Q 010112 216 RIVLMVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHG 295 (518)
Q Consensus 216 r~~f~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (518)
..-|++.+.+.++..+.++++|...+. .+++. ++.+. +..+.+.+ ..++.....++.++..+.-+..-..
T Consensus 322 WlGFLi~g~~~~~~a~p~f~fPk~lp~--~~~~~-~~~~~---~~~k~~~~----~~~~~~~~~~~ikdfp~s~~~ll~N 391 (735)
T KOG3626|consen 322 WLGFLICGALLLFSAVPLFFFPKELPK--SQKRK-RARDL---HVLKTESG----GAKSDKTFGKKIKDFPKSIKRLLSN 391 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccCcc--ccccc-hhhhh---cccccccc----cccCCcchhhhHHHHHHHHHHHhcC
Confidence 778888888888877777788866543 11110 00000 00000000 0000000011111111111111111
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccC--
Q 010112 296 LHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGR-- 372 (518)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~-- 372 (518)
..+....+...+....+.+..+|+|.|++. +|.++... ..+.......+..+|.+++|++.+|+.-
T Consensus 392 ~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~A-----------n~l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 392 PIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLA-----------NILTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred chHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHH-----------HHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence 244556666666677888889999999986 66665542 2233344445556678889999999753
Q ss_pred hhHHHHHHHHHHHHHHH---Hhhccc-------------------c-c-----------------c--------------
Q 010112 373 FAIQMMGFFFMTVFMFA---LAIPYH-------------------H-W-----------------T-------------- 398 (518)
Q Consensus 373 r~~~~~~~~~~~~~~~~---~~~~~~-------------------~-~-----------------~-------------- 398 (518)
|....+..+...+.++. ..+... . . .
T Consensus 461 r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpC 540 (735)
T KOG3626|consen 461 RGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPC 540 (735)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChh
Confidence 44433333333333322 111100 0 0 0
Q ss_pred ---------CC------------C--------------------chhHHHHHHHHHHHHHhcCccceeeeccccccchhh
Q 010112 399 ---------LK------------P--------------------NRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARL 437 (518)
Q Consensus 399 ---------~~------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 437 (518)
.. . ....+++++++..+....+..| .+.++-..+|+|+
T Consensus 541 hAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p-~~~i~LR~V~~e~ 619 (735)
T KOG3626|consen 541 HAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVP-GMLIVLRCVPPEE 619 (735)
T ss_pred hhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCc-ceEEEEEccCchh
Confidence 00 0 1123344444444444454444 4467778889999
Q ss_pred hhhHHHHHHHHHH-HHHHHHHhhhHhhhhcC
Q 010112 438 RSTCHGISAAAGK-AGAIVGAFGFLYAAQSK 467 (518)
Q Consensus 438 ~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~ 467 (518)
|+.++|+..++.+ +|.+-+|+++|++.|.+
T Consensus 620 ks~AlG~~~~~irllg~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 620 KSFALGFQWMLIRLLGFIPSPIIFGAVIDTT 650 (735)
T ss_pred chhhhHHHHHHHHHHhcCCchHhhhhhHhhH
Confidence 9999999988876 89999999999999866
No 117
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.74 E-value=2.2e-19 Score=177.72 Aligned_cols=405 Identities=14% Similarity=0.144 Sum_probs=3.0
Q ss_pred HHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHH
Q 010112 28 AGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLIL 107 (518)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l 107 (518)
.++..+.+....+.....++.+.+.| +++.++.|++.+.+-++..+..++..++.+|..|-|.+-.|.++
T Consensus 8 ~~~~~~~q~~~~g~~~~~lttiErRF----------~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~ 77 (539)
T PF03137_consen 8 LCLLGLFQMMVSGYVNSSLTTIERRF----------GLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALL 77 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHH
Confidence 33444455667777788889999999 99999999999999999999999999999998888999999999
Q ss_pred HHHHHHHhhhc----cCCc----------------------------------------hhhHHHHHHHHHHHhhhcccc
Q 010112 108 MVISSIASGLS----FGKS----------------------------------------AKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 108 ~~i~~~~~~~~----~~~~----------------------------------------~~~~~~~l~~~r~l~G~~~g~ 143 (518)
++++++++++- ..|. ....+..++++.++.|+|...
T Consensus 78 ~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~p 157 (539)
T PF03137_consen 78 MGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATP 157 (539)
T ss_dssp --------------------------------------------------------------------------SSS---
T ss_pred HHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccC
Confidence 99999998752 1110 001257889999999999999
Q ss_pred ccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC--CCCCCCCCCCCCCCCC--cchHHH
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAP--PYSVDPVGSTAPEADY--VWRIVL 219 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~wr~~f 219 (518)
.++...+|+-|.+++++-+..+|+..+...+|.++|.++++.+.+...+..... ...++|. +.+| .|..-|
T Consensus 158 l~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~-----dp~WvGAWWLGf 232 (539)
T PF03137_consen 158 LYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPS-----DPRWVGAWWLGF 232 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCC-----CccHHHHHHHHH
Confidence 999999999999999999999999999999999999999998886544321111 1112111 1111 366677
Q ss_pred HhhhHHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhH----hhhhhhccCCcccchhhhhhhhhh
Q 010112 220 MVGALPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDK----VAKLSQRDSNSFGLFSREFLKRHG 295 (518)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 295 (518)
++.+++.++..+..+++|++.+.....+++.+..+++..+.. .+...+.++ .+..+.-.+..+++++++
T Consensus 233 li~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np------ 305 (539)
T PF03137_consen 233 LICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSD-KDSFKDPKSKKSFGKSIKDFPKALKRLLTNP------ 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhh-hhcccccccccchhhhhhhHHHHHHHHhcCh------
Confidence 777776666655556666543321000000000000000000 000000000 001111122223333333
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhcc--C
Q 010112 296 LHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMG--R 372 (518)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g--~ 372 (518)
.++...+..........+...|.|.|++. ++.++...+ .+.......+..+|.+++|++.+|++ .
T Consensus 306 -~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~-----------~l~G~v~ip~~~~G~llGG~ivkk~kl~~ 373 (539)
T PF03137_consen 306 -VFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQAS-----------LLTGIVSIPGAALGILLGGYIVKKFKLSA 373 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-----------HHHhhhhcchhheehheEEEEEEEecCcH
Confidence 33444445555556667788899999885 666655532 23444445567788889999999974 3
Q ss_pred hhHHHHHHHHHHHHHHH---Hhhcc-----------ccc----c-C----------------------------CCchhH
Q 010112 373 FAIQMMGFFFMTVFMFA---LAIPY-----------HHW----T-L----------------------------KPNRIG 405 (518)
Q Consensus 373 r~~~~~~~~~~~~~~~~---~~~~~-----------~~~----~-~----------------------------~~~~~~ 405 (518)
|..+....+...++.++ ..+.. .+. . . ......
T Consensus 374 ~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~ 453 (539)
T PF03137_consen 374 RGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIP 453 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHH
Confidence 44444443333333332 11100 010 0 0 001122
Q ss_pred HHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHH-HHHHHHHhhhHhhhhcC
Q 010112 406 FVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGK-AGAIVGAFGFLYAAQSK 467 (518)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~ 467 (518)
++++..+..+.......|.. ...-+.+|+++|+.+.|+...+.+ +|.+-+|+++|.+.|..
T Consensus 454 Fl~~~~~~~~~~~~~~~p~~-~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 454 FLILLFILSFFTFMSQVPST-LITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp ---------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhcccchh-eeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 33333333333344444444 455678899999999999988776 78999999999999743
No 118
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.72 E-value=3.7e-15 Score=139.93 Aligned_cols=392 Identities=15% Similarity=0.089 Sum_probs=229.5
Q ss_pred CCCCchhhHHHHHHHHHHHHhhhhhhhhhhhh-cchhhHHHHHHHHHHHHHHHhhhcc--CCchhhHHHHHHHHHHHhhh
Q 010112 63 GTLPPNVSAAVNGVALCGTLAGQLFFGWLGDK-LGRKKVYGITLILMVISSIASGLSF--GKSAKGVIATLCFFRFWLGF 139 (518)
Q Consensus 63 ~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~--~~~~~~~~~~l~~~r~l~G~ 139 (518)
.++++++..-+.+.|.--.-...+++|+++|| .|+|+++..|.++..+|.++.+.+. . ...+.++-.+.++
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~------~~gl~i~L~~I~i 129 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSG------PGGLYIGLALIIV 129 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhcccccc------ccHHHHHHHHHHh
Confidence 46999999888998888888999999999999 5999999999999999999999985 4 5788899999999
Q ss_pred ccccccchhhHHhhhhcccc--cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchH
Q 010112 140 GIGGDYPLSATIMSEYANKK--TRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRI 217 (518)
Q Consensus 140 ~~g~~~~~~~~~i~e~~~~~--~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~ 217 (518)
|.|..-+...+++.|.+|++ +|-..+++++.+.++|..++|.+.+++.+. +||..
T Consensus 130 G~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~-----------------------~g~~~ 186 (498)
T COG3104 130 GTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAIN-----------------------YGWHV 186 (498)
T ss_pred ccccccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHh-----------------------hCHHH
Confidence 99999999999999999864 477889999999999999999999999854 44999
Q ss_pred HHHhhhHHHHHHHHHHhcCCC----CcchhhhhhccHHHHHHH----HHHHHhhh--cchhhhHhhhhh-----------
Q 010112 218 VLMVGALPAALTYYWRMRMPE----TARYTALVAKNAKQAAAD----MSKVLQVE--LEAEEDKVAKLS----------- 276 (518)
Q Consensus 218 ~f~~~~~~~~~~~~~~~~~~e----sp~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~----------- 276 (518)
.|...++-..+.++.....+. ++........+..+.... ........ .....++.....
T Consensus 187 gF~~aavGm~~gl~~f~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~ 266 (498)
T COG3104 187 GFGLAAVGMIIGLVIFLLGRRHVKGIGGVPDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIY 266 (498)
T ss_pred HHHHHHHHHHHHHHHHHHccchhcCCCCCCCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988776666555433321 110000000111111100 00000000 000000000000
Q ss_pred -hccCCcccchh-hhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHh
Q 010112 277 -QRDSNSFGLFS-REFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALC 354 (518)
Q Consensus 277 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (518)
.+.-...+... +++.....+.++...+.|.+..........+.....+. ++ .+.+. ..+. .-....+
T Consensus 267 ~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~-~~----~g~~v-----p~~~-fQslNp~ 335 (498)
T COG3104 267 FAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRNVNR-QI----FGFEV-----PPAW-FQSLNPF 335 (498)
T ss_pred HHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHhhcc-cc----cceec-----CHHH-HHhhCHH
Confidence 00000000000 01111111112222222222222222233332222211 10 00000 0111 2222222
Q ss_pred hcccchhhhhhhhhhccCh-------hHHHHHHHHHHHHHHHHhhcccccc--CCCchhHHHHHHHHHHHHHhcCcccee
Q 010112 355 STVPGYWFTVAFIDYMGRF-------AIQMMGFFFMTVFMFALAIPYHHWT--LKPNRIGFVIMYSLTFFFANFGPNATT 425 (518)
Q Consensus 355 ~~~~~~~~~g~l~dr~g~r-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (518)
..++..++..++..|.+++ .-+-.+..+++.+.+++........ ....+..+.+...++..++.....|+.
T Consensus 336 ~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvG 415 (498)
T COG3104 336 FIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVG 415 (498)
T ss_pred HHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHH
Confidence 3333344444455553322 2344566666666666655421111 233456667777777788888899999
Q ss_pred eeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 426 FVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
.+++....|+...+.++++.......++.++..+.+.-.+ ++ ++ .+.......|..++...++..+..+
T Consensus 416 Ls~~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~~~~-~~-----~~-~~~~~~~~~F~~~g~v~i~~~~~~~ 484 (498)
T COG3104 416 LSMVTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGLTAV-TD-----PA-YTAFIEGRVFGTIGVVAIVIGILLL 484 (498)
T ss_pred HHHHHHhChHHHHHHHHHHHHHHHHHHHHhhceecccccc-cc-----hh-hhhhhhhhhHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888777777777777664221 10 00 1334556677777777777666655
No 119
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.69 E-value=1.5e-15 Score=152.00 Aligned_cols=170 Identities=15% Similarity=0.048 Sum_probs=127.4
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHH-h--hhccCCchhhHHHHHHHHHHHhhhc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIA-S--GLSFGKSAKGVIATLCFFRFWLGFG 140 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~-~--~~~~~~~~~~~~~~l~~~r~l~G~~ 140 (518)
+.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+. . ..+++ ...++++|++.|++
T Consensus 282 g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~ 355 (490)
T PRK10642 282 HYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNV------IGLIFAGLLMLAVI 355 (490)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCC------HHHHHHHHHHHHHH
Confidence 788888888888999999999999999999999999988877654433332 2 22333 57778899999987
Q ss_pred cccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHH
Q 010112 141 IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLM 220 (518)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~ 220 (518)
.+........++.|.+|++.|+++++.......++..++|.+.+++.+..+ +|+.+++
T Consensus 356 ~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~----------------------~~~~~~~ 413 (490)
T PRK10642 356 LNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ----------------------NLMMPAY 413 (490)
T ss_pred HHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------------------CchHHHH
Confidence 777777788889999999999999997555555666788888888764333 2787777
Q ss_pred hhhHHHHHHHHHHhcCCCCcchhhhh----hccHHHHHHHHHHHH
Q 010112 221 VGALPAALTYYWRMRMPETARYTALV----AKNAKQAAADMSKVL 261 (518)
Q Consensus 221 ~~~~~~~~~~~~~~~~~esp~~~~~~----~~~~~~~~~~~~~~~ 261 (518)
+..+++++.++..+++||+|+++..+ +++.+|+++.+.+..
T Consensus 414 ~~~~~~~i~~~~~~~~pes~~~~~~~~~~~~~~~~~a~~~l~~~~ 458 (490)
T PRK10642 414 YLMVVAVIGLITGVTMKETANRPLKGATPAASDIQEAKEILVEHY 458 (490)
T ss_pred HHHHHHHHHHHHHHHhccccCCCCCCccccccchhhHHHHhhccc
Confidence 76677776666666789999985322 255566666666554
No 120
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.57 E-value=1.2e-12 Score=120.85 Aligned_cols=366 Identities=13% Similarity=0.075 Sum_probs=215.7
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc-----hhhH-HHHHHHHHHHHHHHhhhc-----c---CC--chhhHH
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG-----RKKV-YGITLILMVISSIASGLS-----F---GK--SAKGVI 127 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G-----rr~~-~~~~~~l~~i~~~~~~~~-----~---~~--~~~~~~ 127 (518)
+++....+.+.++..+.. ...+.+|+.+|+.+ ||.. +..|..+...+..+..++ . +. ...-..
T Consensus 11 ~vpA~lv~~lval~~~~a-p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~ 89 (403)
T PF03209_consen 11 GVPAWLVALLVALHYLVA-PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGL 89 (403)
T ss_pred ccHHHHHHHHHHHHHHHH-HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHH
Confidence 888888888888888776 46899999999998 7765 556666666655555442 2 00 000112
Q ss_pred HHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCC
Q 010112 128 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGST 207 (518)
Q Consensus 128 ~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 207 (518)
....+.-.+.|+|.+.......++++|..|+++|+++.++.....-+|.+++..+.+.+.+.+++
T Consensus 90 ~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~--------------- 154 (403)
T PF03209_consen 90 ALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSP--------------- 154 (403)
T ss_pred HHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCH---------------
Confidence 34556778899999999999999999999999999999999999999999999999988754432
Q ss_pred CCCCCCcchHHHHhhh--HHHHHHHHHHhcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhhhhhccCCcccc
Q 010112 208 APEADYVWRIVLMVGA--LPAALTYYWRMRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGL 285 (518)
Q Consensus 208 ~~~~~~~wr~~f~~~~--~~~~~~~~~~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (518)
-|..-.+.. ++.++..++..+-.|.+... .. +.++ +++.+.++.
T Consensus 155 -------~rL~~v~~~~a~i~~~l~~ia~wg~E~r~~~-~~-~~~~-------------------------~~~~~f~~a 200 (403)
T PF03209_consen 155 -------ERLIQVIQGVALIALLLNLIALWGQEPRRSR-RA-AAAE-------------------------RPRPPFREA 200 (403)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHhcccCCcc-cc-cCCC-------------------------CCCccHHHH
Confidence 333333322 22222222222333332210 00 0000 000011111
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhh
Q 010112 286 FSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTV 364 (518)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 364 (518)
+++..-.++.++++ ...+.....++.....+..|-. -+|+++.+... .+.....+.++|....+
T Consensus 201 ~~~~~~~~~a~~f~---~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~------------Lta~~~~G~L~G~~~~g 265 (403)
T PF03209_consen 201 WRQVWASPQARRFF---VFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTR------------LTAFWGGGTLLGMLLAG 265 (403)
T ss_pred HHHHHhCCChhHHH---HHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHH
Confidence 11111111111111 1122233445554444433333 35666554322 56666667777777777
Q ss_pred hhhh-hccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHH
Q 010112 365 AFID-YMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHG 443 (518)
Q Consensus 365 ~l~d-r~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g 443 (518)
++.. |.++++....+.....+++.++..... . .+.+.+.....+++...+. ...-..+...+..++++.|..+|
T Consensus 266 ~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~-~---~~~~~~~~~~~l~G~g~G~-f~vgals~mM~lt~~~~aG~~mG 340 (403)
T PF03209_consen 266 FLLSRRLGKKRTAALGCLLGALAFALIILAGP-L---GSPWLFRPGVFLLGLGNGL-FTVGALSLMMDLTSAGRAGLFMG 340 (403)
T ss_pred HHhcCCCCchHHHHHHHHHHHHHHHHHHHHHh-c---ccchHHHHHHHHHHHhhhH-HHHHHHHHHHhCCCCcchhHHHH
Confidence 7666 678888888888888777777665442 1 1222222222222222222 22223345567778888999999
Q ss_pred HHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 010112 444 ISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLC 502 (518)
Q Consensus 444 ~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (518)
.-.....+...++..+.|.+.|....-... ....+|..+|.+=++..+++..+...
T Consensus 341 ~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~---~~~~aY~~VF~lEa~ll~~a~~ll~~ 396 (403)
T PF03209_consen 341 AWGAAQAIARGLGTFLGGALRDLVRALFGN---SPALAYGVVFALEAVLLLAALVLLGR 396 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccC---CcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888887654210000 13457778887777777777665553
No 121
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.55 E-value=1.2e-13 Score=141.24 Aligned_cols=142 Identities=14% Similarity=0.106 Sum_probs=122.2
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhh
Q 010112 70 SAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSA 149 (518)
Q Consensus 70 ~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (518)
..+...+..++..++.++.|+++||+|||++++++.+++++++++.++.++ ...+++.+++.|++.++.++...
T Consensus 597 ~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s------~~~ll~~~~l~g~~~~~~~~~~~ 670 (742)
T TIGR01299 597 IYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNS------ESAMIALLCLFGGLSIAAWNALD 670 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcc------HHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566777999999999999999999999999999999999999999887 57788888899988888889999
Q ss_pred HHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHH
Q 010112 150 TIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALT 229 (518)
Q Consensus 150 ~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 229 (518)
++++|++|.++|++++|+......+|.+++|.+++.+... +...+|++.+++.++.
T Consensus 671 a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~------------------------~~~~pf~i~a~~lll~ 726 (742)
T TIGR01299 671 VLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI------------------------TKAAPILFASAALACG 726 (742)
T ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------------hhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887632 1456777777777776
Q ss_pred HHHHhcCCCCcc
Q 010112 230 YYWRMRMPETAR 241 (518)
Q Consensus 230 ~~~~~~~~esp~ 241 (518)
.++..++||+..
T Consensus 727 ~ll~~~LPET~~ 738 (742)
T TIGR01299 727 GLLALKLPDTRG 738 (742)
T ss_pred HHHHHhCCCCcc
Confidence 666667898753
No 122
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.55 E-value=2.3e-14 Score=117.62 Aligned_cols=136 Identities=25% Similarity=0.328 Sum_probs=118.0
Q ss_pred HHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhh
Q 010112 74 NGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMS 153 (518)
Q Consensus 74 ~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 153 (518)
.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...+.++ ++.+.+.+++.|++.+...+....++.
T Consensus 4 ~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~ 77 (141)
T TIGR00880 4 LAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSN------ITVLIIARFLQGFGAAFALVAGAALIA 77 (141)
T ss_pred EEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 34567788899999999999999999999999999999998888877 788999999999999999999999999
Q ss_pred hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH
Q 010112 154 EYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR 233 (518)
Q Consensus 154 e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 233 (518)
|.+|+++|++..++......+|..+++.+++.+.+. .+|++.+++.++..++..+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~ 134 (141)
T TIGR00880 78 DIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQF-----------------------LGWRAPFLFLAILALAAFILL 134 (141)
T ss_pred HHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcc-----------------------cchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999988643 349999998877766655443
Q ss_pred -hcCCC
Q 010112 234 -MRMPE 238 (518)
Q Consensus 234 -~~~~e 238 (518)
++.||
T Consensus 135 ~~~~~~ 140 (141)
T TIGR00880 135 AFLLPE 140 (141)
T ss_pred hhcCCC
Confidence 34454
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.55 E-value=1.1e-13 Score=135.25 Aligned_cols=159 Identities=12% Similarity=0.020 Sum_probs=129.0
Q ss_pred CCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccc
Q 010112 65 LPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGD 144 (518)
Q Consensus 65 ~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 144 (518)
++..+.+...++..++..++.++.|+++||+|||+++..+.++.+++..+....... ...++.+++.+++.|++.+..
T Consensus 248 ~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~--~~~~~~l~l~~~l~g~~~~~~ 325 (418)
T TIGR00889 248 FVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPE--YFGYALLFLSMIVYGCAFDFF 325 (418)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcc--hhhHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999999999999999999999999998887777664321 001456778899999999988
Q ss_pred cchhhHHhhhhcccccchhHHHHHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhh
Q 010112 145 YPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGA 223 (518)
Q Consensus 145 ~~~~~~~i~e~~~~~~rg~~~~~~~-~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (518)
.+....++.|++|+++|+++.|+.+ ....+|.++||.+++.+.+..+. ...+||+..|.+.+
T Consensus 326 ~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~-----------------~~~~~~~~~f~~~~ 388 (418)
T TIGR00889 326 NISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFA-----------------YGTFDWQTMWLFFA 388 (418)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhcc-----------------ccCCchHHHHHHHH
Confidence 8888999999999999999999997 67889999999999999876652 12256999999887
Q ss_pred HHHHHHHHH-HhcCCCCcch
Q 010112 224 LPAALTYYW-RMRMPETARY 242 (518)
Q Consensus 224 ~~~~~~~~~-~~~~~esp~~ 242 (518)
++.++..++ .+++||+.+.
T Consensus 389 ~~~~i~~~l~~~~~~~~~~~ 408 (418)
T TIGR00889 389 GYIAILAVLFMIFFKYSHNA 408 (418)
T ss_pred HHHHHHHHHHHHHhCCcccC
Confidence 776665444 5667877543
No 124
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.54 E-value=1.9e-13 Score=132.08 Aligned_cols=366 Identities=12% Similarity=0.112 Sum_probs=213.9
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHH
Q 010112 23 TAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYG 102 (518)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~ 102 (518)
.+.....+-.+..++......+..+.....+ + .+.+ ..+....+.-.....+...+.++..|.++||+|||..+.
T Consensus 22 ~~~~~~fl~~fa~~l~~~~~~~~~~~~~ct~-~--~~~~--~~~~~~~~~~~~~~~~~~~i~s~~iG~lSD~~grk~~L~ 96 (463)
T KOG2816|consen 22 HLEPLLFLYMFSWGLSSTVMTNVILYLACTF-G--DDYQ--LENGLLLGVKQVTAGLLTLISSPLIGALSDRYGRKVVLL 96 (463)
T ss_pred HHHHHHHHHHHHHHhcCcchhhhhhhhhccc-c--cCcc--chhhhhhhHHHHhhHHHHHHHHhhhHHhhhhhhhhhhHH
Confidence 3444444545555555545555555555444 1 1000 011111222222446777899999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhc--cccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 010112 103 ITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFG--IGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (518)
Q Consensus 103 ~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~ 180 (518)
+..+...+..+...+... |.++ +.|+. .+.......++++|....++|....++.......+..++|
T Consensus 97 ~~~~~~~l~~~~~~~~~~-------~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p 165 (463)
T KOG2816|consen 97 LPLFGTILPALCLLFQGY-------WFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGP 165 (463)
T ss_pred HHHHHHHHhHHHHHHHHH-------HHhh----hcccccchhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHH
Confidence 999999888887777652 3333 44442 3345678889999999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcchhhhhhccHHHHHHHHHH
Q 010112 181 IVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARYTALVAKNAKQAAADMSK 259 (518)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~ 259 (518)
.+++.+.+..+ .-..|.+.++..++..+. .+++||+... ++.++ ....+
T Consensus 166 ~~~~~~~~~~~-----------------------~a~~f~ia~~~~~~~~~y~~~~l~Esl~~-----~~~~~--~~~~~ 215 (463)
T KOG2816|consen 166 ALGGYLVKFLG-----------------------IALVFLIAAASGILSLLYMLLFLPESLQE-----KERSD--ATLRE 215 (463)
T ss_pred HHHHHHHHhcC-----------------------chHHHHHHHHHHHHHHHHHhhccccccCc-----ccccc--ccccc
Confidence 99999986544 667888877777766554 5678887542 11110 00000
Q ss_pred HHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHh-hHHHHHH-HhcCCCCCcchhh
Q 010112 260 VLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNL-FQKDIFS-AIGWIPPAATMNA 337 (518)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~g~~~~~~~~~~ 337 (518)
. +..+....+..+..+..++. +..+..+.+.+..+.......+... ..+.+++ ..+|++.+.+
T Consensus 216 ---~------~~~~~~~~~~~~~~~~~~~~---~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s--- 280 (463)
T KOG2816|consen 216 ---L------TPGSLDSSHVADAFQSLTKV---GPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFS--- 280 (463)
T ss_pred ---c------CCCcccchhhhhhhhhhccc---CCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHH---
Confidence 0 00000000000011111111 1111222222222222111111000 1111111 2455544422
Q ss_pred hHHHHHHHHHHHHHHHhhcccchh-hhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHH
Q 010112 338 IHEVYKIARAQTLIALCSTVPGYW-FTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFF 416 (518)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~-~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (518)
........ ...++.+ ..+.+...++.|+....|.....+....+++....| ..+ ... ....
T Consensus 281 --------~~~~~~~~-~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w------~~~--~~~-v~~~ 342 (463)
T KOG2816|consen 281 --------DLLSLVSI-LGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETW------MMF--AAG-VVVA 342 (463)
T ss_pred --------HHHHHHHH-HHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccch------hhh--HHH-HHHH
Confidence 22222222 2223333 345788889999988889888888888888876311 111 111 1222
Q ss_pred HhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcC
Q 010112 417 ANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSK 467 (518)
Q Consensus 417 ~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 467 (518)
......|...+..+...+++++|++.++...+..+...++|.+.+.+...+
T Consensus 343 ~~~~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 343 LAGIVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred hhcchhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 333356777788889999999999999999999999999999999886544
No 125
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.50 E-value=7.5e-13 Score=128.88 Aligned_cols=145 Identities=15% Similarity=0.198 Sum_probs=120.3
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.+..+.+++.+...++..++.++.|+++||+|||+.+..+.+...+........++ .+.+++.|++.+++.+.
T Consensus 248 ~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~l~~~~l~~~~~g~ 321 (393)
T PRK15011 248 HLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHS------PAILLGLQLLNAIYIGI 321 (393)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh------HHHHHHHHHHHHHHHHH
Confidence 899999999988888888899999999999999999888777666665555555555 57778899998888777
Q ss_pred ccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGA 223 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (518)
..+....+..|.+|+ +|+++.++.+....+|..+++.+++.+.+..+ |+..|++.+
T Consensus 322 ~~~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g-----------------------~~~~~~~~~ 377 (393)
T PRK15011 322 LGGIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWN-----------------------YHAVFWFAL 377 (393)
T ss_pred HHHHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------hHHHHHHHH
Confidence 777778888999985 69999999999999999999999999975444 999999888
Q ss_pred HHHHHHHHHHhcCCC
Q 010112 224 LPAALTYYWRMRMPE 238 (518)
Q Consensus 224 ~~~~~~~~~~~~~~e 238 (518)
++.++.++..++.||
T Consensus 378 ~~~~~~~~~~~~~~~ 392 (393)
T PRK15011 378 VMIIATLFCLLRIKD 392 (393)
T ss_pred HHHHHHHHHHHhhcC
Confidence 888777776666665
No 126
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.49 E-value=4.4e-13 Score=131.85 Aligned_cols=149 Identities=9% Similarity=0.050 Sum_probs=125.2
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.+..+.|++.++..++..++.+++|++.||+|||+.+..+.++.+++.++.+++++ .+.+++.+++.|++.+.
T Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~------~~~~~~~~~l~g~~~~~ 331 (420)
T PRK09528 258 EQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATG------PLEVSILKLLHAFEVPF 331 (420)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhccc------HHHHHHHHHHHHHHHHH
Confidence 566678899999999999999999999999999999999999999999888888888 68888999999998888
Q ss_pred ccchhhHHhhhhcccccchhHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~-~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
..+....++.|.+|++.|+...+. ++....+|.++++.+.+++.+..+ ||..|.+.
T Consensus 332 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G-----------------------~~~~f~~~ 388 (420)
T PRK09528 332 LLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIG-----------------------FQGTYLIL 388 (420)
T ss_pred HHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhC-----------------------chHHHHHH
Confidence 778888999999999999887655 567788999999999999986444 99999987
Q ss_pred hHHHHHHHHH-HhcCCCCcc
Q 010112 223 ALPAALTYYW-RMRMPETAR 241 (518)
Q Consensus 223 ~~~~~~~~~~-~~~~~esp~ 241 (518)
+++.++..++ .+.++++|+
T Consensus 389 ~~~~~i~~~~~~~~~~~~~~ 408 (420)
T PRK09528 389 GGIVLLFTLISVFTLSGDRE 408 (420)
T ss_pred HHHHHHHHHHHHHHhcCCch
Confidence 7776655443 444555443
No 127
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.48 E-value=7.9e-13 Score=128.24 Aligned_cols=140 Identities=16% Similarity=0.157 Sum_probs=120.4
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.+..+.+.+.+.+.++..+++++.|++.||+|||+.+..+.++..++.++..+.++.. ...++...++.|++.+.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~g~~~g~ 311 (377)
T TIGR00890 236 GLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLN----DVLFLATVALVFFTWGG 311 (377)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccch----hHHHHHHHHHHHHHhcc
Confidence 78888999999999999999999999999999999999999999998888877766420 23455677888888888
Q ss_pred ccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGA 223 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (518)
..+....++.|.+|+++|+++.|+......+|..++|.+.+.+.+.. ||+..|.+.+
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~-----------------------g~~~~f~~~~ 368 (377)
T TIGR00890 312 TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI-----------------------GFEYTFIVTG 368 (377)
T ss_pred chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh-----------------------chhhHHHHHH
Confidence 88888899999999999999999999999999999999999987544 4999998887
Q ss_pred HHHHHHH
Q 010112 224 LPAALTY 230 (518)
Q Consensus 224 ~~~~~~~ 230 (518)
++.++..
T Consensus 369 ~~~~~~~ 375 (377)
T TIGR00890 369 AFALTSL 375 (377)
T ss_pred HHHHHhc
Confidence 7666543
No 128
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.48 E-value=1.7e-12 Score=127.21 Aligned_cols=157 Identities=17% Similarity=0.065 Sum_probs=127.6
Q ss_pred HHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCc
Q 010112 43 SLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKS 122 (518)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~ 122 (518)
....|.+.++. |.+..+.+.+.+...++..++.++.|++.||+|||+.+..+.+...++.++..+.++
T Consensus 240 ~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~-- 307 (406)
T PRK11551 240 LNWLPSLLVGQ----------GLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPS-- 307 (406)
T ss_pred HHHHHHHHHhC----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCc--
Confidence 34456666666 899999999999999999999999999999999999988877777777777777766
Q ss_pred hhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCC
Q 010112 123 AKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVD 202 (518)
Q Consensus 123 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~ 202 (518)
.+.+.+..++.|++.+...+...+++.|.+|+++|++..++.+....+|..++|.+++.+.+..+
T Consensus 308 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~----------- 372 (406)
T PRK11551 308 ----FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR----------- 372 (406)
T ss_pred ----HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC-----------
Confidence 57777788888988877788899999999999999999999999999999999999999874332
Q ss_pred CCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCC
Q 010112 203 PVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMP 237 (518)
Q Consensus 203 ~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 237 (518)
+|...++..+...++..+..+++.
T Consensus 373 -----------~~~~~~~~~~~~~~~~~~~~~~~~ 396 (406)
T PRK11551 373 -----------STVGVIGASIPVILVAALAALLLV 396 (406)
T ss_pred -----------chHHHHHHHHHHHHHHHHHHHHHh
Confidence 266677666655555554444333
No 129
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.47 E-value=1.1e-12 Score=127.83 Aligned_cols=394 Identities=14% Similarity=0.129 Sum_probs=216.8
Q ss_pred HHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc-----hhhHHHHHHHHHHHHHHHhhh
Q 010112 43 SLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG-----RKKVYGITLILMVISSIASGL 117 (518)
Q Consensus 43 ~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G-----rr~~~~~~~~l~~i~~~~~~~ 117 (518)
....+.+++++ ++++++.....+...+... ..++.|.++|-+- ||+-++++.++.+++.+..+.
T Consensus 10 ~~~~~~l~~~l----------~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~ 78 (433)
T PF03092_consen 10 LAIYPFLKDDL----------GLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLAL 78 (433)
T ss_pred HHHHHHHHHHc----------CCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHh
Confidence 45667788888 9999999999998888874 5677899999863 444567777777666666665
Q ss_pred ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcc--cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Q 010112 118 SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYAN--KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFK 195 (518)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~--~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~ 195 (518)
.+... .+.....+.-++..+|......++-+++.|... +++||...+.......+|.+++..+++.+.+..+
T Consensus 79 ~~~~~--~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~---- 152 (433)
T PF03092_consen 79 LPASE--SSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFG---- 152 (433)
T ss_pred ccccc--chhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCC----
Confidence 44411 114555666777888888999999999999984 3447888888888899999999999998875433
Q ss_pred CCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH-hcCCCCcchhhhhhccHHHHHHHHHHHHhhhcchhhhHhhh
Q 010112 196 APPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR-MRMPETARYTALVAKNAKQAAADMSKVLQVELEAEEDKVAK 274 (518)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (518)
+|..|.+.+++..+..+.. +..+|.++. ++.+.....+. +.......
T Consensus 153 -------------------~~~~f~i~~~~~~l~~~~~~~~~~e~~~~---~~~~~~~~~~~----------~~~~~~~~ 200 (433)
T PF03092_consen 153 -------------------PQGVFLISAALPLLMLIVALFLLEERKVR---PADEVFSFGKE----------EVPCLFGS 200 (433)
T ss_pred -------------------CeEEehHHHHHHHHHHHHHHHhhhhcccc---ccchhhccccc----------ccchhhHH
Confidence 7788888776666554443 334442111 00000000000 00000000
Q ss_pred hhhccCCcccchhhhhhhhhhhHHHHHHH-HHHHHHHHHH---h-HHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHH
Q 010112 275 LSQRDSNSFGLFSREFLKRHGLHLFGTTS-TWFLLDIAFY---S-QNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQT 349 (518)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 349 (518)
.++.-...++.++.+...+ ... ..++...... + ...+.. ...+ . ...+....+. ..
T Consensus 201 ~~~~~~~l~~~~~~~~i~~-------~~~~~~~~~~~~~~~~~a~~fy~~~---~~~~-g-------p~fs~~f~~~-~~ 261 (433)
T PF03092_consen 201 FREQLSELWRALQQRAIWQ-------PILFFIFFFNLPPSISSASSFYFQT---DALG-G-------PHFSPSFYGT-LS 261 (433)
T ss_pred HHHHHHHHHHHHhhhHHHH-------HHHHHHHHHHhccCCCCccEEEEEe---cccc-c-------cccCHHHHHH-HH
Confidence 0000011122222222211 111 1111000000 0 000000 0011 0 0011111222 23
Q ss_pred HHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCC---CchhHHHHHHHHHHHHHhcCccceee
Q 010112 350 LIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLK---PNRIGFVIMYSLTFFFANFGPNATTF 426 (518)
Q Consensus 350 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (518)
.+..++.++|..+......+..-|+++....++.++..+.-......++.. ++.+..+.-..+..........|..
T Consensus 262 ~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~l- 340 (433)
T PF03092_consen 262 IVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSL- 340 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHH-
Confidence 555555555555555555555666776666555544433322221122110 1112222222223333333334433
Q ss_pred eccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccC
Q 010112 427 VVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPES 506 (518)
Q Consensus 427 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (518)
.+++|+.|+...|+..++...+.++|..++..+...+.+..+.+..+ ..+.....++..++.++...+..++|+.
T Consensus 341 vl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~-----f~~l~~lili~~~~~ll~l~ll~lLp~~ 415 (433)
T PF03092_consen 341 VLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDD-----FSNLWLLILICSVIQLLPLPLLFLLPPQ 415 (433)
T ss_pred HHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccc-----ccchHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 57789999999999999999999999999999999998877643211 1233344555666666666666577765
Q ss_pred CCCC
Q 010112 507 KGRS 510 (518)
Q Consensus 507 ~~~~ 510 (518)
++..
T Consensus 416 ~~~~ 419 (433)
T PF03092_consen 416 KRIT 419 (433)
T ss_pred chhh
Confidence 5443
No 130
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.44 E-value=4.6e-12 Score=123.86 Aligned_cols=142 Identities=19% Similarity=0.183 Sum_probs=121.2
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchh
Q 010112 69 VSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLS 148 (518)
Q Consensus 69 ~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 148 (518)
+.++..+.+.++..++.++.|++.||+|||+.+..+..+.+++.++..+.++ .+.+++.+++.|++.+...+..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~G~~~~~~~~~~ 323 (399)
T PRK05122 250 GAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPS------PWMALIGAALTGFGFSLVFPAL 323 (399)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHhHHHHHHHH
Confidence 4566778888999999999999999999999999999988888888888777 5778889999999999888888
Q ss_pred hHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHH
Q 010112 149 ATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAAL 228 (518)
Q Consensus 149 ~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~ 228 (518)
...+.|.+|+++|+++.+++.....+|..+++.+.+.+.+..+ |+..|++.++..++
T Consensus 324 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g-----------------------~~~~~~~~~~~~~~ 380 (399)
T PRK05122 324 GVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFG-----------------------YPSIFLAAALAALL 380 (399)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-----------------------HHHHHHHHHHHHHH
Confidence 8888999999999999999999999999999999998875444 99999998887777
Q ss_pred HHHHHhcCCCC
Q 010112 229 TYYWRMRMPET 239 (518)
Q Consensus 229 ~~~~~~~~~es 239 (518)
..+...+++++
T Consensus 381 ~~~~~~~~~~~ 391 (399)
T PRK05122 381 GLALTWLLYRR 391 (399)
T ss_pred HHHHHHHhccc
Confidence 66655445443
No 131
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.44 E-value=5.3e-12 Score=121.12 Aligned_cols=143 Identities=24% Similarity=0.304 Sum_probs=131.3
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhh-HHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKK-VYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIG 142 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~-~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (518)
+.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.++....++ .+.+.+..++.|++.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~g~~~~ 280 (352)
T cd06174 207 GLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPS------LALLLVALLLLGFGLG 280 (352)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHh
Confidence 788999999999999999999999999999999999 999999999999999999887 6889999999999999
Q ss_pred cccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
...+....++.|..|+++|++.+++......+|..+++.+.+.+.+ ..+|+..+++.
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~-----------------------~~~~~~~~~~~ 337 (352)
T cd06174 281 FAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD-----------------------TGGYGGVFLIL 337 (352)
T ss_pred ccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-----------------------ccCcchHHHHH
Confidence 9999999999999999999999999999999999999999999874 34499999998
Q ss_pred hHHHHHHHHHHhc
Q 010112 223 ALPAALTYYWRMR 235 (518)
Q Consensus 223 ~~~~~~~~~~~~~ 235 (518)
+++.++..+...+
T Consensus 338 ~~~~~i~~i~~~~ 350 (352)
T cd06174 338 AALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHHhee
Confidence 8888777665443
No 132
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.43 E-value=6.4e-11 Score=107.82 Aligned_cols=183 Identities=16% Similarity=0.142 Sum_probs=121.5
Q ss_pred chhHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc
Q 010112 17 TQLYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG 96 (518)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G 96 (518)
..+.|+.-+.+-.++...+.+. +|..-.+.+++ +.+..|++.+....+....+..++.|.++||+|
T Consensus 32 f~~Fqr~yl~vY~La~~aDWLQ----GpY~Y~LY~~y----------g~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~G 97 (354)
T PF05631_consen 32 FRRFQRKYLLVYLLAMAADWLQ----GPYLYALYESY----------GFSEHQIAILFVAGFASSAIFGTFVGSLADRYG 97 (354)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh----cchhHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3444444444444445555443 34444455677 999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHH-hhhhcccccchhHHHHHHH-----
Q 010112 97 RKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATI-MSEYANKKTRGAFIAAVFA----- 170 (518)
Q Consensus 97 rr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~-i~e~~~~~~rg~~~~~~~~----- 170 (518)
||+..+...++.+++++.. ..++ ++.++++|++.|++....+.+--++ +.|.-..+.+....+-...
T Consensus 98 rk~~cl~~cily~~scl~k-~~~~------~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~ 170 (354)
T PF05631_consen 98 RKKACLLFCILYSLSCLTK-HSSN------YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFF 170 (354)
T ss_pred chHHHHHHHHHHHHHHHHH-hccc------cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 9999999999999999744 4466 6999999999999999888877776 4555433322233332222
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH-hcCCCCcc
Q 010112 171 MQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR-MRMPETAR 241 (518)
Q Consensus 171 ~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~esp~ 241 (518)
..++-.+++..++-++.+..+ .|-..+|....++.++..+++ ...+|+..
T Consensus 171 ~n~~vAI~aGv~a~~l~~~~~---------------------~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg 221 (354)
T PF05631_consen 171 GNGVVAIGAGVVANVLADWFG---------------------FGPVAPFDAAIVLLAVAAVLILKTWPENYG 221 (354)
T ss_pred HhHHHHHHHhHHHHHHHHHhC---------------------CCCcchHHHHHHHHHHHHHHHHhcccccCC
Confidence 222223344444444443333 223578887776666655443 44566543
No 133
>PRK12382 putative transporter; Provisional
Probab=99.40 E-value=1.1e-11 Score=120.99 Aligned_cols=135 Identities=18% Similarity=0.209 Sum_probs=118.4
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhh
Q 010112 70 SAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSA 149 (518)
Q Consensus 70 ~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (518)
.++..+.+.++..+++++.|++.||+|||+.+..+..+.+++.++..+.++ .+.+++++++.|++.+...+...
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~~~~~~~ 324 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPT------AWVALAGAALTGAGCSLIFPALG 324 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHccc------HHHHHHHHHHHHHHHHhHHHHHH
Confidence 456677788888999999999999999999999999999998888888777 67788899999999998888888
Q ss_pred HHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHH
Q 010112 150 TIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALT 229 (518)
Q Consensus 150 ~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~ 229 (518)
..+.|.+|+++|+++.++.+....+|..+++.+.+.+.+..+ |+..|.+.+++.++.
T Consensus 325 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-----------------------~~~~~~~~~~~~~~~ 381 (392)
T PRK12382 325 VEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFG-----------------------YPSVFLAGAISAVLG 381 (392)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------------------chHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999986544 999999988777766
Q ss_pred HHHH
Q 010112 230 YYWR 233 (518)
Q Consensus 230 ~~~~ 233 (518)
.+..
T Consensus 382 ~~~~ 385 (392)
T PRK12382 382 IIVT 385 (392)
T ss_pred HHHH
Confidence 5543
No 134
>PRK03545 putative arabinose transporter; Provisional
Probab=99.39 E-value=2.3e-11 Score=118.47 Aligned_cols=139 Identities=17% Similarity=0.143 Sum_probs=113.0
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHH-HhhhccCCchhhHHHHHHHHHHHhhhccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSI-ASGLSFGKSAKGVIATLCFFRFWLGFGIG 142 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~-~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (518)
|.+..+.+++.+...++..+++++.|+++||+|||+... +..+..++.. +....++ .+.++++.++.|++.+
T Consensus 237 g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~~-~~~~~~~~~~~l~~~~~~------~~~~~~~~~l~g~~~~ 309 (390)
T PRK03545 237 GLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLLI-AIALLLVCLLLLLPAANS------EWHLSVLSIFWGIAIM 309 (390)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHHH-HHHHHHHHHHHHHHHhch------HHHHHHHHHHHHHHHh
Confidence 889999999999999999999999999999999887544 4444444433 3344555 6778888999999887
Q ss_pred cccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
...+.....+.|..| ++|++++++......+|..+|+.+++.+.+.. ++|..|++.
T Consensus 310 ~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~-----------------------g~~~~~~~~ 365 (390)
T PRK03545 310 CIGLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHL-----------------------GLSSIGYVG 365 (390)
T ss_pred cchHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------ChhHHHHHH
Confidence 777778888888876 68899999999999999999999999998544 499999998
Q ss_pred hHHHHHHHHHH
Q 010112 223 ALPAALTYYWR 233 (518)
Q Consensus 223 ~~~~~~~~~~~ 233 (518)
+++.++..+..
T Consensus 366 ~~~~~~~~~~~ 376 (390)
T PRK03545 366 AALALAALVWS 376 (390)
T ss_pred HHHHHHHHHHH
Confidence 88777765553
No 135
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.39 E-value=1.8e-12 Score=128.47 Aligned_cols=152 Identities=9% Similarity=0.073 Sum_probs=121.1
Q ss_pred HHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc--chhhHHHH--HHHHHHHHHHHhhh
Q 010112 42 ISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL--GRKKVYGI--TLILMVISSIASGL 117 (518)
Q Consensus 42 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~--Grr~~~~~--~~~l~~i~~~~~~~ 117 (518)
....+|.+.+++ +.+..+.+++.++..++..+++++.|+++||. ++|+...+ +.++.+++.+++.+
T Consensus 260 ~~~~l~~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~ 329 (455)
T TIGR00892 260 PIIFLVPYAKDK----------GVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCAL 329 (455)
T ss_pred hHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455555667 89999999999999999999999999999983 34443333 33444455555666
Q ss_pred ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 010112 118 SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAP 197 (518)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~ 197 (518)
.++ ++.+++.+++.|++.+...+...+++.|.+|++++++..++++....+|..+||.+++.+.+..+
T Consensus 330 ~~~------~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g------ 397 (455)
T TIGR00892 330 AGD------YTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK------ 397 (455)
T ss_pred hch------HHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC------
Confidence 666 68888999999999999999999999999999999999999999999999999999998875443
Q ss_pred CCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHH
Q 010112 198 PYSVDPVGSTAPEADYVWRIVLMVGALPAALTYY 231 (518)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~ 231 (518)
+|+..|++.++..++..+
T Consensus 398 ----------------~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 398 ----------------NYKYIFYASGSIVVSAGL 415 (455)
T ss_pred ----------------CcchHHHHhhHHHHHHHH
Confidence 299999888776655443
No 136
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.39 E-value=1e-11 Score=120.48 Aligned_cols=145 Identities=13% Similarity=0.165 Sum_probs=120.9
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.++.+.+++.+.......++.++.|++.||+|||+++..+.++..+..+...+.++ .+.+.+.+++.|++.+.
T Consensus 231 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 231 GLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNS------LWALLMLQLLNAIFIGI 304 (375)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHH
Confidence 888999999988888888889999999999999999988887776666655555555 57778889999998888
Q ss_pred ccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGA 223 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (518)
..+....++.|..|+ +|+++.++......+|..+++.+++.+.+..+ |+..|++.+
T Consensus 305 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g-----------------------~~~~~~~~~ 360 (375)
T TIGR00899 305 LAGIGMLYFQDLMPG-RAGAATTLYTNTGRVGWIIAGSVGGILAERWS-----------------------YHAVYWFAI 360 (375)
T ss_pred HHHHHHHHHHHhCcc-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------chhHHHHHH
Confidence 888888999999875 56799999999999999999999999875444 999999988
Q ss_pred HHHHHHHHHHhcCCC
Q 010112 224 LPAALTYYWRMRMPE 238 (518)
Q Consensus 224 ~~~~~~~~~~~~~~e 238 (518)
+..++..+...+++|
T Consensus 361 ~~~~~~~~~~~~~~~ 375 (375)
T TIGR00899 361 VMLIVALFCLLLIKD 375 (375)
T ss_pred HHHHHHHHHHheecC
Confidence 887777666555543
No 137
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.38 E-value=8.7e-12 Score=121.20 Aligned_cols=175 Identities=13% Similarity=0.053 Sum_probs=123.5
Q ss_pred HHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHH
Q 010112 299 FGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMM 378 (518)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 378 (518)
+...+..+......+......|.+.++.|+++.+.+. ......++..++.++.|.+.||+|||+.+..
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~ 90 (394)
T PRK10213 23 FSVAFCVACLIIVEFLPVSLLTPMAQDLGISEGVAGQ------------SVTVTAFVAMFASLFITQTIQATDRRYVVIL 90 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhcccCcHHHHHH
Confidence 3333333333334444444577787888887765333 4445566677788899999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 010112 379 GFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAF 458 (518)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 458 (518)
+.++.+++.++..... +.+...+.-.+.+ .......+....++.|.+|+++|+.+.++.....+++..++|.
T Consensus 91 ~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G-~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~ 162 (394)
T PRK10213 91 FAVLLTLSCLLVSFAN-------SFSLLLIGRACLG-LALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAP 162 (394)
T ss_pred HHHHHHHHHHHHHHHC-------hHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888777766543 2233333333333 3322245667778899999999999999999999999999999
Q ss_pred hhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccC
Q 010112 459 GFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPES 506 (518)
Q Consensus 459 ~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (518)
+.+.+. +..||+..|.+.+++.+++.+... ..||+
T Consensus 163 l~~~l~-------------~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~ 198 (394)
T PRK10213 163 LGSFLG-------------ELIGWRNVFNAAAVMGVLCIFWIIKSLPSL 198 (394)
T ss_pred HHHHHH-------------hhcCHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 999997 456899999988877776655544 45664
No 138
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.38 E-value=1.9e-11 Score=119.01 Aligned_cols=165 Identities=13% Similarity=0.091 Sum_probs=126.0
Q ss_pred hHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhc
Q 010112 39 LFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLS 118 (518)
Q Consensus 39 ~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~ 118 (518)
........|.+.+++ +.+..+.|...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....
T Consensus 221 ~~~~~~~lp~~l~~~----------g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~ 290 (393)
T PRK09705 221 YASLIAWLPAFYIEI----------GASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWL 290 (393)
T ss_pred HHHHHHHHHHHHHHc----------CCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHc
Confidence 333444555555567 8999999999999999999999999999999999999998888887777665543
Q ss_pred cCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCC
Q 010112 119 FGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAP 197 (518)
Q Consensus 119 ~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~ 197 (518)
+.. ...+ .-++.|++.+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..+.
T Consensus 291 ~~~-----~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~----- 358 (393)
T PRK09705 291 PLQ-----LPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGN----- 358 (393)
T ss_pred cch-----HHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 431 1222 2245688888888877777777775 57899999999999999999999999999976653
Q ss_pred CCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcch
Q 010112 198 PYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETARY 242 (518)
Q Consensus 198 ~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~~ 242 (518)
|...|.+.++.+++..+. ..+.||++..
T Consensus 359 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK09705 359 -----------------YLMDWAFHALCVVGLMIITLRFAPARFPQ 387 (393)
T ss_pred -----------------chHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 788888877666655444 4556776543
No 139
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.38 E-value=1.2e-11 Score=121.54 Aligned_cols=136 Identities=22% Similarity=0.325 Sum_probs=118.4
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchh
Q 010112 69 VSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLS 148 (518)
Q Consensus 69 ~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~ 148 (518)
..+.+.+...++..++.+..|+++||+|||+.+..+..+..++.+...+.++ .+.+++.+++.|++.+...+..
T Consensus 259 ~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~ 332 (408)
T PRK09874 259 ISGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQT------PLQLGILRFLLGAADGALLPAV 332 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHhhhHhhHHHH
Confidence 3566777788888999999999999999999999999888888877777776 6888889999999999999999
Q ss_pred hHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHH
Q 010112 149 ATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAAL 228 (518)
Q Consensus 149 ~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~ 228 (518)
.+++.+..|+++||+.+++......+|..+||.+++.+.+. .+|+..|++.++..++
T Consensus 333 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~-----------------------~g~~~~f~~~~~~~l~ 389 (408)
T PRK09874 333 QTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISAN-----------------------YGFRAVFLVTAGVVLF 389 (408)
T ss_pred HHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhh-----------------------cchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999998744 3499999998887777
Q ss_pred HHHHH
Q 010112 229 TYYWR 233 (518)
Q Consensus 229 ~~~~~ 233 (518)
..+..
T Consensus 390 ~~~~~ 394 (408)
T PRK09874 390 NAVYS 394 (408)
T ss_pred HHHHH
Confidence 65544
No 140
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.38 E-value=1.3e-11 Score=122.99 Aligned_cols=180 Identities=13% Similarity=0.037 Sum_probs=123.0
Q ss_pred HHHHHHHhhhhhhhHHHHHHHhh-hhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHH
Q 010112 26 VIAGMGFFTDAYDLFCISLVTKL-LGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGIT 104 (518)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~ 104 (518)
..+++..++............|. +.+++ |++..+.++..+...++..++.+++|+++||+|||+.+...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~p~yl~~~~----------g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~ 330 (467)
T PRK09556 261 WLLCFANIFLYIVRIGIDNWSPVYAFQEL----------GFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVAC 330 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHH
Confidence 33444444444444445555564 55667 99999999999999999999999999999999999887665
Q ss_pred HHHHHHHHHHhh--hccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHH-HHHHHHH
Q 010112 105 LILMVISSIASG--LSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGF-GILAGGI 181 (518)
Q Consensus 105 ~~l~~i~~~~~~--~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~l-G~~lg~~ 181 (518)
..+..++..+.. ...+ .+.+.+.+++.|++.............|.+|+++||++.|+......+ |..++|.
T Consensus 331 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~ 404 (467)
T PRK09556 331 IALALIIFTLGVYQHATS------EYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKV 404 (467)
T ss_pred HHHHHHHHHHHHHHhcCc------HHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhh
Confidence 544444332222 2333 566678888888654333333346777999999999999999988886 7789999
Q ss_pred HHHHHHhhcccCCCCCCCCCCCCCCC-CCCCCCcchHHHHhhhHHHHHHHHHH
Q 010112 182 VALIVSSAFDHHFKAPPYSVDPVGST-APEADYVWRIVLMVGALPAALTYYWR 233 (518)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~wr~~f~~~~~~~~~~~~~~ 233 (518)
+.+.+.+.... |.. ......+|+..|++.++..++..+..
T Consensus 405 ~~G~i~~~~~~------------g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 405 GLGMIADPTKN------------GTPIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred hHHHHhccccc------------ccccccccccChHHHHHHHHHHHHHHHHHH
Confidence 99999851000 000 00113569999988777666655443
No 141
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.37 E-value=2e-11 Score=118.40 Aligned_cols=133 Identities=8% Similarity=-0.070 Sum_probs=118.6
Q ss_pred HHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCC
Q 010112 42 ISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGK 121 (518)
Q Consensus 42 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~ 121 (518)
+....|...++. |.+..+.|.+.+...++..++.++.+++.||+|+|+.+.++.++..+..++.+++++
T Consensus 224 ~~~~~~~~l~~~----------g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~- 292 (382)
T TIGR00902 224 YYGFSAIYWQAA----------GISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEA- 292 (382)
T ss_pred HHHHHHHHHHHC----------CCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhh-
Confidence 333445544567 999999999999999999999999999999999999999999999999999999888
Q ss_pred chhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHH-HHHHHHHHHHHHHHHHHHhhcc
Q 010112 122 SAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 122 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~-~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
++.+++.+++.|++.+...+....++.+. |+++|++..++++ ...++|..+++.+++.+.+..+
T Consensus 293 -----~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g 357 (382)
T TIGR00902 293 -----FPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG 357 (382)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 78899999999999999999999999998 9999999999976 5678999999999999986544
No 142
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.36 E-value=2.2e-11 Score=118.18 Aligned_cols=150 Identities=17% Similarity=0.162 Sum_probs=121.3
Q ss_pred HHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCch
Q 010112 44 LVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSA 123 (518)
Q Consensus 44 ~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~ 123 (518)
..+|...++. +.+.++.+++.+...++..+++++.|++.||+|+|+++..+..+.+++.+... ..
T Consensus 221 ~~lp~~~~~~----------g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~~--- 285 (381)
T PRK03633 221 GLMPLYLNHQ----------GMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--SQ--- 285 (381)
T ss_pred HHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--hh---
Confidence 3456555566 88999999999999999999999999999999999999988888877665443 22
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCC
Q 010112 124 KGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDP 203 (518)
Q Consensus 124 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~ 203 (518)
.......++.|++.....|...+++.|..|+++++...+......++|.++||.+++++.+..+
T Consensus 286 ----~~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g------------ 349 (381)
T PRK03633 286 ----AAMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS------------ 349 (381)
T ss_pred ----HHHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC------------
Confidence 3344567788887777789999999999998888888888888899999999999999986544
Q ss_pred CCCCCCCCCCcchHHHHhhhHHHHHHHHHHhc
Q 010112 204 VGSTAPEADYVWRIVLMVGALPAALTYYWRMR 235 (518)
Q Consensus 204 ~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 235 (518)
|++.|.+.+.+.++..+...+
T Consensus 350 -----------~~~~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 350 -----------DNLLFIMIASVSFIYLLMLLR 370 (381)
T ss_pred -----------ccHHHHHHHHHHHHHHHHHHh
Confidence 889998877777665554433
No 143
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.36 E-value=6.5e-12 Score=126.63 Aligned_cols=135 Identities=19% Similarity=0.204 Sum_probs=104.9
Q ss_pred HHHHhhhh-hhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCC
Q 010112 43 SLVTKLLG-RIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGK 121 (518)
Q Consensus 43 ~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~ 121 (518)
....|.+. +++ +.+..+.+++.+...++..++.++.|+++||+|||+++..+.++..+..++.....+.
T Consensus 295 ~~~lp~~l~~~~----------g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (496)
T PRK03893 295 QALLPTYLKTDL----------GYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGA 364 (496)
T ss_pred HHHHHHHHHhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhcccc
Confidence 34455554 466 8999999999999999999999999999999999999888887777666544433321
Q ss_pred chhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 122 SAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 122 ~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
..+.+.+..++.+.......+....++.|.+|+++|++.+++......+|..+||.+++.+.+..+
T Consensus 365 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g 430 (496)
T PRK03893 365 ----NVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLD 430 (496)
T ss_pred ----HHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCC
Confidence 134444555555443334456778899999999999999999999999999999999999975433
No 144
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.36 E-value=1.3e-11 Score=121.08 Aligned_cols=180 Identities=17% Similarity=0.154 Sum_probs=127.7
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ 376 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 376 (518)
.+....+.++......+......|.+.++.|+++.+.+. ......++..++.++.|++.||+|||+.+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~ 80 (405)
T TIGR00891 13 AFSAAWLGWLLDAFDFFLVALVLAEVAGEFGLTTVDAAS------------LISAALISRWFGALMFGLWGDRYGRRLPM 80 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 344455555565666666777778888888887776433 55566677788889999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVG 456 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 456 (518)
..+.++.+++.++..... +...... ..+..+.+.....+...+++.|.+|+++|+.+.++.+....+|..++
T Consensus 81 ~~~~~~~~~~~~~~~~~~-------~~~~l~~-~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~ 152 (405)
T TIGR00891 81 VTSIVLFSAGTLACGFAP-------GYITMFI-ARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVA 152 (405)
T ss_pred HHHHHHHHHHHHHHHHhc-------cHHHHHH-HHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 998888888777766544 2222322 23333333333455667788999999999999999999999999999
Q ss_pred HhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccCC
Q 010112 457 AFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPESK 507 (518)
Q Consensus 457 ~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (518)
+.+.+.+.+..+ .+|+..|.+.++..++..+.....||++
T Consensus 153 ~~l~~~l~~~~~-----------~~w~~~f~~~~~~~~~~~~~~~~~~~~~ 192 (405)
T TIGR00891 153 AQVYSLVVPVWG-----------DGWRALFFISILPIIFALWLRKNIPEAE 192 (405)
T ss_pred HHHHHHHHHhcC-----------ccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999998874221 2588888876666655554444667653
No 145
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.36 E-value=1.5e-11 Score=120.90 Aligned_cols=148 Identities=11% Similarity=0.009 Sum_probs=124.5
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
|.+..+.|++.+...++..++.++.+++.||.++|+.+..+.++.+++.++..+.++ .+.+.++.++.|++.+.
T Consensus 255 g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~ 328 (417)
T PRK10489 255 QMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPM------WILAVLCLALFGYLSAI 328 (417)
T ss_pred CCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccch------HHHHHHHHHHHHHHHHH
Confidence 889999999999999999999999999999988888888888888888888877776 67778888999998887
Q ss_pred ccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGA 223 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~ 223 (518)
..+...+++.|..|++.||++.+++.....+|..+|+.+.+.+.+..+ ++..++..+
T Consensus 329 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g-----------------------~~~~~~~~~ 385 (417)
T PRK10489 329 SSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMT-----------------------PVASASASG 385 (417)
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhc-----------------------hhhHHHHHH
Confidence 777888899999999999999999999999999999999999986555 677777665
Q ss_pred HHHHH-HHHHHhcCCCCc
Q 010112 224 LPAAL-TYYWRMRMPETA 240 (518)
Q Consensus 224 ~~~~~-~~~~~~~~~esp 240 (518)
...++ ..+....++|.+
T Consensus 386 ~~~~~~~~~~~~~~~~~~ 403 (417)
T PRK10489 386 FGLLIIGVLLLLVLGELR 403 (417)
T ss_pred HHHHHHHHHHHHhccccc
Confidence 55444 444455566654
No 146
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.36 E-value=8.1e-12 Score=121.59 Aligned_cols=170 Identities=14% Similarity=0.126 Sum_probs=121.3
Q ss_pred HHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHH
Q 010112 306 FLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTV 385 (518)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~ 385 (518)
+.............|.+.++.|.++.+.+. ......++..++.++.|++.||+|||+.+..+..+.++
T Consensus 15 ~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~ 82 (385)
T TIGR00710 15 ILGPLGIDMYLPAFPEIAADLSTPASIVQM------------TLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFAL 82 (385)
T ss_pred HHHHHHHHHhcccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHH
Confidence 333334444445567777777776655332 55666677788889999999999999999999888888
Q ss_pred HHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 386 FMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
+.+...... +.....+. .+..+.......+...++..|.+|+++|+++.|+.+....+|..++|.+.+.+.
T Consensus 83 ~~~~~~~~~-------~~~~~~~~-~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~- 153 (385)
T TIGR00710 83 SSLGLALSN-------NIETLLVL-RFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYIL- 153 (385)
T ss_pred HHHHHHHHc-------cHHHHHHH-HHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 777766544 22222222 222333233334566678899999999999999999999999999999999887
Q ss_pred cCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCCC
Q 010112 466 SKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESKG 508 (518)
Q Consensus 466 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 508 (518)
+..+|+..+.+.+++.++..+..+ ..||+++
T Consensus 154 ------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (385)
T TIGR00710 154 ------------VWLSWHAIFAFLSLAGILLSALIFFILPETLP 185 (385)
T ss_pred ------------HHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 355899999888887777766655 5566543
No 147
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.35 E-value=1.6e-11 Score=121.06 Aligned_cols=173 Identities=10% Similarity=0.095 Sum_probs=122.9
Q ss_pred HHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHH
Q 010112 300 GTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMG 379 (518)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~ 379 (518)
...+.++...........+.|.+.++.|+++.+.+. ......++..++.++.|++.||+|||+.+..+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~ 94 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLADLGLSRSDIGL------------LATLFYITYGVSKFVSGIVSDRSNARYFMGIG 94 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHhhhhHHHhhcCCchhHHHH
Confidence 344444444444445667788888888877654322 55566677777889999999999999999999
Q ss_pred HHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhh
Q 010112 380 FFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFG 459 (518)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~ 459 (518)
.++.+++.++..... +.........+.+...+. ..+....++.|.+|+++|++++|+.+....+|..++|.+
T Consensus 95 ~~~~~~~~~~~~~~~-------~~~~l~~~~~l~g~~~g~-~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~ 166 (434)
T PRK11663 95 LIATGIINILFGFSS-------SLWAFALLWVLNAFFQGW-GWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLV 166 (434)
T ss_pred HHHHHHHHHHHHHHh-------HHHHHHHHHHHHHHHHHc-cchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 988888887766554 222232222222323332 345566788999999999999999999999999999999
Q ss_pred hHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hccc
Q 010112 460 FLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPE 505 (518)
Q Consensus 460 ~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 505 (518)
.+.+. +..||+..|.+.+++.++..+... +++|
T Consensus 167 ~~~l~-------------~~~gw~~~f~~~~i~~~~~~~~~~~~~~~ 200 (434)
T PRK11663 167 VGAIA-------------LHYGWRYGMMIAGIIAIVVGLFLCWRLRD 200 (434)
T ss_pred HHHHH-------------HcccHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99987 456899999888877665544333 4554
No 148
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.35 E-value=7.4e-12 Score=120.22 Aligned_cols=158 Identities=15% Similarity=0.161 Sum_probs=117.2
Q ss_pred HHHHhHHhhHH-HHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHH
Q 010112 310 IAFYSQNLFQK-DIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMF 388 (518)
Q Consensus 310 ~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 388 (518)
..........| .+.++.|.++.+.+. ......++..++.++.|+++||+|||+.+..+.++.+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~ 77 (352)
T PF07690_consen 10 FGFSIISPALPLYLAEELGLSPSQIGL------------LFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSL 77 (352)
T ss_dssp HHHHHHHHHHH-HHHCCSTTTSHCHHH------------HHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHccCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHH
Confidence 34444445556 555667777766433 55556677788899999999999999999999998888844
Q ss_pred HHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCC
Q 010112 389 ALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKD 468 (518)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 468 (518)
+..+.. +.+ .+.+..+..+.+.....+....++.|.+|+++|++++++.+....+|..++|.+.+.+.
T Consensus 78 ~~~~~~-------~~~-~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~---- 145 (352)
T PF07690_consen 78 LLAFAS-------NFW-LLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLI---- 145 (352)
T ss_dssp HHHHHC-------CHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCC----
T ss_pred Hhhhhh-------hHH-HHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhh----
Confidence 444322 233 33333334444434456778889999999999999999999999999999999999997
Q ss_pred CCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 469 PTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
+..+|+..|++.+++.++..++.
T Consensus 146 ---------~~~~~~~~~~~~~~~~~~~~il~ 168 (352)
T PF07690_consen 146 ---------SYFGWRWAFLISAILSLIAAILF 168 (352)
T ss_dssp ---------CHCHHCCHHHHHHHHHHHHHHHH
T ss_pred ---------hccccccccccccchhhhhhhhH
Confidence 46689999999999999887753
No 149
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.35 E-value=1.3e-11 Score=120.60 Aligned_cols=173 Identities=12% Similarity=0.078 Sum_probs=120.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhc-cChh
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYM-GRFA 374 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~-g~r~ 374 (518)
.++............+|+...++|.++.+ .|+++.+ +............++.+++|+++||+ |||+
T Consensus 10 ~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~------------a~~i~~~~~~~~~l~~ligG~LaDRilGrrr 77 (493)
T PRK15462 10 AIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNH------------AYELFSAYCSLVYVTPILGGFLADKVLGNRM 77 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH------------HHHHHHHHHHHHHHHHHHHHHHHHHccCcHH
Confidence 34455555566677888888899988875 5665543 22245555566667888999999999 9999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh--hhhhHHHHHHHHHHHH
Q 010112 375 IQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR--LRSTCHGISAAAGKAG 452 (518)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g 452 (518)
.+..+.++..++.+++..... ..........+ ...+.....+...++..|.+|++ .|+++.++.....++|
T Consensus 78 ~iliG~il~~lg~lll~~~~~------~~~~~~l~l~l-i~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG 150 (493)
T PRK15462 78 AVMLGALLMAIGHVVLGASEI------HPSFLYLSLAI-IVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVG 150 (493)
T ss_pred HHHHHHHHHHHHHHHHHHhhc------chhHHHHHHHH-HHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHH
Confidence 999999998888766543220 11111111111 11222223345567889999875 7999999999999999
Q ss_pred HHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 453 AIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 453 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
+.++|.+.+++. +..||+..|.+.++..+++.+..+
T Consensus 151 ~~iap~l~g~L~-------------~~~Gw~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 151 SIIAPIACGYAQ-------------EEYSWAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HHHHHHHHHHHH-------------hhhChHHHHHHHHHHHHHHHHHHH
Confidence 999999999997 456899999887776666655544
No 150
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.33 E-value=1.6e-11 Score=123.41 Aligned_cols=174 Identities=10% Similarity=0.039 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHH
Q 010112 301 TTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGF 380 (518)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 380 (518)
+....+.............|.+.++.|.++.+.+. ......++..++.++.|++.||+|||+.+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 74 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGDLGSSLSQVQW------------VITSYMLANAISIPLTGWLAKRFGTRRLFLIST 74 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhhhH------------HHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHH
Confidence 33444444444555667788888888887765443 556667777888899999999999999999998
Q ss_pred HHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 010112 381 FFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGF 460 (518)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 460 (518)
.+..++.++..... +....+ +..+..+.+.....+...+++.|.+|+++|+++.++......+|..++|.+.
T Consensus 75 ~~~~~~~~~~~~~~-------~~~~l~-~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~ 146 (485)
T TIGR00711 75 FAFTLGSLLCGVAP-------NLELMI-IFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLG 146 (485)
T ss_pred HHHHHHHHHHhCcC-------CHHHHH-HHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccH
Confidence 88888887776544 222333 3333333333445567778899999999999999999999999999999999
Q ss_pred HhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 461 LYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 461 g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
+++. +..+|+..|++.+.+.++..++.+ +.|+++
T Consensus 147 ~~l~-------------~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 147 GWII-------------ENYHWRWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hHhc-------------cCcCceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 9987 456899999888777777666555 555543
No 151
>PRK10054 putative transporter; Provisional
Probab=99.33 E-value=1.8e-11 Score=119.03 Aligned_cols=174 Identities=11% Similarity=-0.015 Sum_probs=120.6
Q ss_pred HHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHH
Q 010112 299 FGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQM 377 (518)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 377 (518)
+.+....++....++....+.+.+++ +.|+++.+.+. ......+..+++.+..|+++||+|||+.+.
T Consensus 10 ~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~ 77 (395)
T PRK10054 10 SALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGY------------AMTIALTIGVVFSLGFGILADKFDKKRYML 77 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhhcCcchhHH
Confidence 33444555555666666666676665 46777665332 444555666778889999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHH
Q 010112 378 MGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGA 457 (518)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 457 (518)
.+.++.+++.+++.+.. +.+..+....+...... ...+....+..|..|+++|+++.|+.+...++|..++|
T Consensus 78 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp 149 (395)
T PRK10054 78 LAITAFASGFIAIPLVN-------NVTLVVLFFALINCAYS-VFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGP 149 (395)
T ss_pred HHHHHHHHHHHHHHHHh-------HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHH
Confidence 88888777776665544 22222222222222222 23455667788999999999999999999999999999
Q ss_pred hhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccC
Q 010112 458 FGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPES 506 (518)
Q Consensus 458 ~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (518)
.+.+.+.+ .+|+..|.+.+++.+++.+... ++|+.
T Consensus 150 ~l~~~l~~--------------~g~~~~f~~~~~~~~i~~i~~~~~~~~~ 185 (395)
T PRK10054 150 PLGTLLVM--------------QSINLPFWLAAICSAFPLVFIQIWVQRS 185 (395)
T ss_pred HHHHHHHH--------------hccCcHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99998862 3788899988888777765544 45444
No 152
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.33 E-value=2.2e-11 Score=119.20 Aligned_cols=184 Identities=10% Similarity=-0.011 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ 376 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 376 (518)
..+...+.+++...-........|.+.++.++++.+.+. ......++..++.+..|++.||+|||+.+
T Consensus 9 ~~~~~~~~~~~~~~d~~~~~~~~~~l~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~G~r~~~ 76 (412)
T TIGR02332 9 LIIFLFILFIFSFLDRINIGFAGLTMGKDLGLSATMFGL------------AATLFYAAYVICGIPSNIMLAIIGARRWI 76 (412)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHhhHhhcCCCHHHHHH------------HHHHHHHHHHHHHhhHHHHHHHhChHHHH
Confidence 344444455554454555666677777777777665333 55556667777888899999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVG 456 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 456 (518)
..+.++..++.++..+.. +.....+. -+..+....+..|....++.|.+|+++|++++|+.+....+|..++
T Consensus 77 ~~~~~~~~~~~~~~~~~~-------~~~~l~~~-r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~ 148 (412)
T TIGR02332 77 AGIMVLWGIASTATMFAT-------GPESLYLL-RILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALG 148 (412)
T ss_pred HHHHHHHHHHHHHHHHhc-------CHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888887776654 22223332 2333333333456666788999999999999999999999999999
Q ss_pred HhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 457 AFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 457 ~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
+.+.+++.+..+ ..+..||+..|.+.++..++..++.+ ++||+.
T Consensus 149 ~~~~~~l~~~~~-------~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p 193 (412)
T TIGR02332 149 LILSGYILALDG-------LMALKGWQWLFLLEGFPSVILGVMTWFWLDDSP 193 (412)
T ss_pred HHHHHHHHhCCC-------CCCccchhHHHHHHHHHHHHHHHHHhhccCCCc
Confidence 999998863210 00245999999998887766555444 667654
No 153
>PRK09952 shikimate transporter; Provisional
Probab=99.33 E-value=1.1e-10 Score=115.10 Aligned_cols=151 Identities=13% Similarity=0.112 Sum_probs=111.9
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhh---ccCCchhhHHHHHHHHHHHhhhc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGL---SFGKSAKGVIATLCFFRFWLGFG 140 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~---~~~~~~~~~~~~l~~~r~l~G~~ 140 (518)
|.+......+.....+...++.++.|+++||+|||+++..+.++..++.+.... ..+. .+.+++..++.|++
T Consensus 282 g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~ 356 (438)
T PRK09952 282 GLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSI-----FWIVFFSIMLANIA 356 (438)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCCh-----HHHHHHHHHHHHHH
Confidence 777776666666667777889999999999999999988887766655443322 2221 34445566777888
Q ss_pred cccccchhhHHhhhhcccccchhHHHHHHH-HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHH
Q 010112 141 IGGDYPLSATIMSEYANKKTRGAFIAAVFA-MQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVL 219 (518)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~-~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f 219 (518)
.+...+...+++.|.+|++.|+...++... +..+|..++|.+.+++.+..+ .+|+..+
T Consensus 357 ~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~---------------------~~~~~~~ 415 (438)
T PRK09952 357 HDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG---------------------GSWHSVA 415 (438)
T ss_pred HHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC---------------------CCchHHH
Confidence 888788889999999999999989888544 455889999999999875332 2388888
Q ss_pred HhhhHHHHHHHHHHhcCCCCc
Q 010112 220 MVGALPAALTYYWRMRMPETA 240 (518)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~esp 240 (518)
...++.+++..+..+.++|++
T Consensus 416 ~~~~~~~~i~~v~~~~~~~~~ 436 (438)
T PRK09952 416 IYLLAGCLISAMTALLMKDNQ 436 (438)
T ss_pred HHHHHHHHHHHHHHHHccccc
Confidence 887777777666655667643
No 154
>PRK03699 putative transporter; Provisional
Probab=99.32 E-value=2.7e-11 Score=118.07 Aligned_cols=167 Identities=9% Similarity=0.061 Sum_probs=129.3
Q ss_pred HHhhhhhhhHHHHHHHhhhh-hhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHH
Q 010112 31 GFFTDAYDLFCISLVTKLLG-RIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMV 109 (518)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~ 109 (518)
..++.......+....|.+. +++ +++..+.+.+.+.+.++..++.+..|+++||++||+++.....+..
T Consensus 213 ~~~~~~~~~~~~~~~~p~~l~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~ 282 (394)
T PRK03699 213 AALLYILAQLTFISWVPEYAQKKF----------GMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLAL 282 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHc----------CCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHH
Confidence 33333333344445555544 567 8999999999999999999999999999999999999988888777
Q ss_pred HHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010112 110 ISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSA 189 (518)
Q Consensus 110 i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~ 189 (518)
+...+....++ .+.+.+..++.|++.+...+...++..|..| +++++..+.......+|..++|.+.+.+.+.
T Consensus 283 ~~~~~~~~~~~------~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~ 355 (394)
T PRK03699 283 VLMYLFVNTDD------PSHLLYAILGLGFFSSAIYTTIITLGSQQTK-VASPKLVNFILTCGTIGTMLTFVVTSPIVAH 355 (394)
T ss_pred HHHHHHHHcCC------chHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-CCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 77777666666 4566677888999888788888888888776 5567888888888999999999999999865
Q ss_pred cccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCC
Q 010112 190 FDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMP 237 (518)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 237 (518)
.+ |+..+++.+++.++..+.....+
T Consensus 356 ~g-----------------------~~~~~~~~~~~~~~~~~~~~~~~ 380 (394)
T PRK03699 356 FG-----------------------LQAALLTANGLYAVVFVMCILLG 380 (394)
T ss_pred hC-----------------------chhhhhhhHHHHHHHHHHHHHHH
Confidence 44 88898887777666554444443
No 155
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.32 E-value=4.5e-11 Score=119.87 Aligned_cols=178 Identities=15% Similarity=0.002 Sum_probs=124.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ 376 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 376 (518)
.+..+++..+....-......-.|.+.++.+.++.+.+. ....+.++...+.+..|+++||+|||+.+
T Consensus 7 ~~~~~~~~~~~~~ld~tiv~~a~p~i~~~l~~s~~~~~~------------~~~~~~l~~~~~~~~~G~l~D~~Grk~~l 74 (495)
T PRK14995 7 TLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLW------------IIDIYSLVMAGMVLPMGALGDRIGFKRLL 74 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHhHHHH------------HHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 344455555555555555667788888887776665333 34444555556677899999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccc-cchhhhhhHHHHHHHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEI-FPARLRSTCHGISAAAGKAGAIV 455 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~p~~~~~~~~g~~~~~~~~g~~~ 455 (518)
..+..+..++.++..... +....++.-.+.+ .+.....+.......+. .|+++|++++|+......+|..+
T Consensus 75 ~~~~~~~~~~~~~~~~a~-------~~~~li~~r~l~G-~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~ 146 (495)
T PRK14995 75 MLGGTLFGLASLAAAFSP-------TASWLIATRALLA-IGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAF 146 (495)
T ss_pred HHHHHHHHHHHHHHHHcC-------CHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888877654 2333333322222 22222344444445454 47899999999999999999999
Q ss_pred HHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 456 GAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 456 ~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
+|.+.+.+. +..+|++.|++...+.++..++.. ++|+.+
T Consensus 147 gp~lgg~l~-------------~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~ 186 (495)
T PRK14995 147 GPLVGGILL-------------EHFYWGSVFLINVPIVLVVMGLTARYVPRQA 186 (495)
T ss_pred HHHHHHHhh-------------ccCChHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999998 567999999988877777766655 566543
No 156
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.32 E-value=9.7e-11 Score=114.44 Aligned_cols=169 Identities=16% Similarity=0.145 Sum_probs=121.6
Q ss_pred HhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHH-HHHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYG-ITLILMVI 110 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~-~~~~l~~i 110 (518)
.++............|.+.+++ +.+..+.+.+.+...++..++.++.|+++||+|||+.+. .+.+..++
T Consensus 231 ~~~~~~~~~~~~~~~p~~~~~~----------g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~ 300 (402)
T TIGR00897 231 RIINTIGLFGFAVFLPMFVAEL----------GFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGI 300 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHH
Confidence 3334444444555667776777 899999999999999999999999999999999988764 33344444
Q ss_pred HHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010112 111 SSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAF 190 (518)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~ 190 (518)
+.+...+.+... .++.+..++..++.|++.+...+ ....+.|..| ++|+++.|+.+....+|..++|.+++.+.+..
T Consensus 301 ~~~~l~~~~~~~-~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~ 377 (402)
T TIGR00897 301 FTLALYYIPQHF-GHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF 377 (402)
T ss_pred HHHHHHHHHHcc-CCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 433333211000 00156677788889988776544 4556677655 68999999999999999999999999998544
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcC
Q 010112 191 DHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRM 236 (518)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 236 (518)
||+..+++.++..++..+...++
T Consensus 378 -----------------------g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 378 -----------------------GAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred -----------------------chHHHHHHHHHHHHHHHHHHHHh
Confidence 49999998887777765554443
No 157
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.31 E-value=4.2e-11 Score=120.24 Aligned_cols=182 Identities=16% Similarity=0.104 Sum_probs=128.8
Q ss_pred HHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHH
Q 010112 26 VIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITL 105 (518)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~ 105 (518)
....+..+.............|.+.+++ +.+..+.++......++..++.++.|+++||+|||+.+..+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 356 (481)
T TIGR00879 287 LGVVLQWFQQFTGINAIMYYSPTIFENA----------GVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGA 356 (481)
T ss_pred HHHHHHHHHHHhCCeehHHHHHHHHHHc----------CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 3333334433333344455567777777 888888899999999999999999999999999999999998
Q ss_pred HHHHHHHHHhhh---ccCCch--hhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 010112 106 ILMVISSIASGL---SFGKSA--KGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (518)
Q Consensus 106 ~l~~i~~~~~~~---~~~~~~--~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~ 180 (518)
++.+++.++.++ ...... ......+....++.+.......+....++.|.+|+++|+++.++......+|.++++
T Consensus 357 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~ 436 (481)
T TIGR00879 357 AGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVG 436 (481)
T ss_pred HHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 888887777662 111100 001233333333333323333466777889999999999999999999999999999
Q ss_pred HHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH-hcCCCCc
Q 010112 181 IVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR-MRMPETA 240 (518)
Q Consensus 181 ~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~-~~~~esp 240 (518)
.+.+.+.+.. +|++.|++.++++++..+.. ++.||++
T Consensus 437 ~~~~~~~~~~-----------------------~~~~~f~~~~~~~~~~~i~~~~~~~~~~ 474 (481)
T TIGR00879 437 FLFPTMLESI-----------------------GVGGVFIFFGGLNVLGLIFVYFFLPETK 474 (481)
T ss_pred HHHHHHHHhc-----------------------CccceehhHHHHHHHHHHHHheecccCC
Confidence 9999887543 38899988887777665554 4566654
No 158
>TIGR00895 2A0115 benzoate transport.
Probab=99.31 E-value=1.3e-11 Score=120.74 Aligned_cols=173 Identities=17% Similarity=0.191 Sum_probs=121.7
Q ss_pred HHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHH
Q 010112 301 TTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGF 380 (518)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 380 (518)
.....+.............|.+.++.|+++.+.+ .......++.+++.++.|+++||+|||+.+..+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~ 89 (398)
T TIGR00895 22 SFLIMLMDGYDLAAMGFAAPAISAEWGLDPVQLG------------FLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSI 89 (398)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHhhccCCCHHHHH------------HHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHH
Confidence 3334444444455556677887777776654422 2555566677788899999999999999999988
Q ss_pred HHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 010112 381 FFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGF 460 (518)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 460 (518)
.+.+++.++..... +.... .+..+..+.......+...++..|.+|++.|+++.++......+|..++|.+.
T Consensus 90 ~~~~~~~~~~~~~~-------~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~ 161 (398)
T TIGR00895 90 LLFSVFTLLCALAT-------NVTQL-LILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLA 161 (398)
T ss_pred HHHHHHHHHHHHcc-------chHHH-HHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHH
Confidence 88887777666543 22222 23333333333345567778899999999999999999999999999999999
Q ss_pred HhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccC
Q 010112 461 LYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPES 506 (518)
Q Consensus 461 g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (518)
+.+. +..+|+..+.+.+++.++..+... ++||+
T Consensus 162 ~~l~-------------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (398)
T TIGR00895 162 GWLI-------------PVFGWRSLFYVGGIAPLLLLLLLMRFLPES 195 (398)
T ss_pred HHHh-------------hcccceeehhhhhhHHHHHHHHHHHhCCCC
Confidence 9987 456888888887655555554444 56654
No 159
>PRK10504 putative transporter; Provisional
Probab=99.30 E-value=3.1e-11 Score=120.82 Aligned_cols=176 Identities=13% Similarity=0.047 Sum_probs=126.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ 376 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 376 (518)
.++......++.....+......|.+.++.|.++.+.+. ......++..++.++.|+++||+|||+.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~r~~~ 78 (471)
T PRK10504 11 QLWIVAFGFFMQSLDTTIVNTALPSMAQSLGESPLHMHM------------VIVSYVLTVAVMLPASGWLADRVGVRNIF 78 (471)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhchHHHH
Confidence 345555666666666667777889998888877654222 44555566677888999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVG 456 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 456 (518)
..+..+.+++.++..... +........ +..+.+.....+...+++.|.+|+++|+++.|+.+...++|..++
T Consensus 79 ~~~~~~~~~~~~~~~~~~-------~~~~l~~~~-~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 150 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSG-------TLNELLLAR-VLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLG 150 (471)
T ss_pred HHHHHHHHHHHHHHHHhC-------CHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 988777777766655433 222232222 233333333456667788899999999999999999999999999
Q ss_pred HhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hccc
Q 010112 457 AFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPE 505 (518)
Q Consensus 457 ~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~ 505 (518)
|.+.+.+. +..||+..|.+...+..++.+... ..|+
T Consensus 151 ~~~~g~l~-------------~~~gw~~~f~~~~~~~~l~~~~~~~~~~~ 187 (471)
T PRK10504 151 PALGGLLV-------------EYASWHWIFLINIPVGIIGAIATLMLMPN 187 (471)
T ss_pred hHHHHHHH-------------hhccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999998 455899999888777777766665 4443
No 160
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.30 E-value=2.9e-10 Score=106.59 Aligned_cols=151 Identities=13% Similarity=0.079 Sum_probs=125.6
Q ss_pred CCCchhhH-HHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccc
Q 010112 64 TLPPNVSA-AVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIG 142 (518)
Q Consensus 64 ~~s~~~~g-~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (518)
|++.+|+. -+.-...-.+....++...+.|..+.|++++++.+...+...+..+.++ ...+-+..+.-|++.+
T Consensus 36 n~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s------v~~mq~~q~~yg~~~a 109 (412)
T PF01770_consen 36 NFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS------VLAMQLMQFFYGLATA 109 (412)
T ss_pred CCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc------HHHHHHHHHHHHHHHH
Confidence 78877775 5677777788889999999999999999999999999999999999998 8999999999999877
Q ss_pred cccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
. ..+..+++.-..|+++-.++.+...++.-+|-.++..+|-.+....+ ..++..+.+.
T Consensus 110 ~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~---------------------~sy~~L~~is 167 (412)
T PF01770_consen 110 A-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGG---------------------VSYFQLNYIS 167 (412)
T ss_pred H-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------------CCHHHHHHHH
Confidence 5 68888999999999999999999999999999999999887774222 2367777776
Q ss_pred hHHHHHHHHHHhcCCCCcch
Q 010112 223 ALPAALTYYWRMRMPETARY 242 (518)
Q Consensus 223 ~~~~~~~~~~~~~~~esp~~ 242 (518)
.....++.++.+++|..++.
T Consensus 168 l~~~~~a~~~~~fLP~~~~S 187 (412)
T PF01770_consen 168 LASVSLALLIALFLPMPKRS 187 (412)
T ss_pred HHHHHHHHHHHHHcCCCCcc
Confidence 66556666667778876653
No 161
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.30 E-value=2.9e-11 Score=118.08 Aligned_cols=144 Identities=14% Similarity=0.035 Sum_probs=110.0
Q ss_pred HhhhhhhhHHHHHHHhhhh-hhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKLLG-RIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVI 110 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i 110 (518)
.+.............|.+. +++ +.+..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~ 297 (394)
T TIGR00883 228 VIATTTTFYLITTYLPTYLTQTL----------GLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAAL 297 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc----------CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 3333444444445555554 556 88899999999999999999999999999999999987755554443
Q ss_pred HH--HHhhhc--cCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHH-HHHHHHHHHHHHHHHHHH
Q 010112 111 SS--IASGLS--FGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILAGGIVALI 185 (518)
Q Consensus 111 ~~--~~~~~~--~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~-~~~~~~lG~~lg~~l~~~ 185 (518)
.. ++..+. ++ .+.+.+..++.|++.+...+...+++.|.+|+++|+++.++ ...+..+|..++|.+++.
T Consensus 298 ~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~ 371 (394)
T TIGR00883 298 LAVPLLMALLDSGS------FTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAA 371 (394)
T ss_pred HHHHHHHHHhcCCc------hHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHH
Confidence 33 222222 23 56777788999998888889999999999999999999998 456667889999999999
Q ss_pred HHhhcc
Q 010112 186 VSSAFD 191 (518)
Q Consensus 186 l~~~~~ 191 (518)
+.+..+
T Consensus 372 l~~~~g 377 (394)
T TIGR00883 372 LVAMTG 377 (394)
T ss_pred HHHHcC
Confidence 986555
No 162
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.30 E-value=3.3e-11 Score=119.68 Aligned_cols=173 Identities=12% Similarity=-0.013 Sum_probs=125.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHH---hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhh-ccC
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSA---IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDY-MGR 372 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~ 372 (518)
.++.+.+..+.....+|+...++|.++.+ .|+++.+ +........++..++.+++|+++|| +||
T Consensus 11 ~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~------------ag~~~~~~~~~~~~~~~~~G~laDr~~G~ 78 (475)
T TIGR00924 11 PLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQ------------AFIIFGAYSALVYLLTSVGWWFGDRVWGT 78 (475)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHH------------HHHHHHHHHHHHHHHHhhHHHHHHhhcch
Confidence 44556666677778888888889998875 4665544 2235666667778889999999999 899
Q ss_pred hhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh---hhhhHHHHHHHHH
Q 010112 373 FAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR---LRSTCHGISAAAG 449 (518)
Q Consensus 373 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~ 449 (518)
|+.+..+..+.+++.+++.... +...... .....+.+.....+...++.+|.+|++ .|+++.++.+...
T Consensus 79 ~~~l~~~~~~~~~g~~~~~~~~-------~~~~~~~-~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ 150 (475)
T TIGR00924 79 KKTMVLGGIVLMLGHFMLAMSI-------YPDLIFY-GLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSI 150 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-------cHhHHHH-HHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHH
Confidence 9999999999988888776543 1122222 222223333334556667888888765 3888999999999
Q ss_pred HHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 010112 450 KAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLC 502 (518)
Q Consensus 450 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (518)
++|..++|.+.+++. +..||+..|.+.++..+++.+..++
T Consensus 151 niG~~ig~~l~g~l~-------------~~~g~~~~f~~~~~~~~~~~l~~~~ 190 (475)
T TIGR00924 151 NIGSFISPLLAGVIA-------------ENYGYHVGFNLAAVGMVIGLLTFFA 190 (475)
T ss_pred HHHHHHHHHHHHHHH-------------HhcChHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999997 4568999998887766666554443
No 163
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.30 E-value=4.4e-11 Score=118.79 Aligned_cols=176 Identities=10% Similarity=0.027 Sum_probs=120.5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhh-ccCh
Q 010112 296 LHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDY-MGRF 373 (518)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r 373 (518)
+.++...+..+.....+|+...+++.++.+ +|++..+.. . ....+........+++|+++|| +|||
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~-----------~-i~~~~~~~~~~~~~~~G~laDr~~G~r 81 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAF-----------I-TFGAFAALVYGLISIGGYVGDHLLGTK 81 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-----------H-HHHHHHHHHHHHHhhHHHhhhhccchH
Confidence 455666666677778899888888888764 565544311 1 2222232333345678999999 9999
Q ss_pred hHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh--hhhhHHHHHHHHHHH
Q 010112 374 AIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR--LRSTCHGISAAAGKA 451 (518)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~ 451 (518)
+.+..+.++..++.+++.+... ....+.+.....+.+.....|...+++.|.+|++ +|+.+.++.....++
T Consensus 82 ~~~~~g~~~~~~g~~~~~~~~~-------~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni 154 (489)
T PRK10207 82 RTIVLGAIVLAIGYFMTGMSLL-------KPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI 154 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-------chhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH
Confidence 9999999999998887776531 1112222222333444445566678899999877 457889999999999
Q ss_pred HHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhc
Q 010112 452 GAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCV 503 (518)
Q Consensus 452 g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (518)
|..++|.+.|++. +..||+..|++.++..+++.+.....
T Consensus 155 g~~~g~~l~g~l~-------------~~~gw~~~F~i~~i~~~~~~~~~~~~ 193 (489)
T PRK10207 155 GSLISLSLAPVIA-------------DKFGYSVTYNLCGAGLIIALLVYFAC 193 (489)
T ss_pred HHHHHHHHHHHHH-------------HhhChHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999998 45689999988766555554444333
No 164
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.29 E-value=3.9e-11 Score=119.54 Aligned_cols=181 Identities=12% Similarity=0.100 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHH
Q 010112 299 FGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMM 378 (518)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 378 (518)
......++......+....+.|.+.++.|++..+.+. ......++..++.++.|+++||+|||+.+..
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~gls~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~ 106 (476)
T PLN00028 39 HLSWISFFTCFVSTFAAAPLLPIIRDNLNLTKSDIGN------------AGIASVSGSIFSRLAMGPVCDLYGPRYGSAF 106 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHHHHH
Confidence 3333334444444555566677888888876554222 3455566777788999999999999999988
Q ss_pred HHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 010112 379 GFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAF 458 (518)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 458 (518)
+.++.+++.++..... +.....+...+.+ ++.....+ ...++.|.+|+++|+.++|+.+...++|..+++.
T Consensus 107 ~~~~~~~~~~~~~~~~-------s~~~l~~~r~l~G-~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~ 177 (476)
T PLN00028 107 LLMLTAPAVFCMSLVS-------SATGFIAVRFFIG-FSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQL 177 (476)
T ss_pred HHHHHHHHHHHHHHhc-------CHHHHHHHHHHHH-HHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHH
Confidence 8888777776665544 2222222222222 22222222 3346789999999999999999888888888877
Q ss_pred hhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcc
Q 010112 459 GFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVP 504 (518)
Q Consensus 459 ~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (518)
+.+.+....... +..+..||+..|++.+++.++..+..++++
T Consensus 178 ~~~~i~~~~~~~----~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~ 219 (476)
T PLN00028 178 LMPLVFPLIKDA----GAPSFTAWRIAFFVPGLLHIIMGILVLTLG 219 (476)
T ss_pred HHHHHHHHHHhc----CCcchhhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 776554211000 000234899999999888877766665443
No 165
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.28 E-value=6.1e-11 Score=117.09 Aligned_cols=163 Identities=15% Similarity=0.075 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHH
Q 010112 298 LFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQM 377 (518)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 377 (518)
.....+.++......+......|.+.++.|+++.+.+ .......++..++.++.|++.||+|||+.+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~~------------~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~ 87 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGA------------FLATAAFIGRPFGGALFGLLADKFGRKPLMM 87 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 3444444555555555566667777777777765422 2555666777888899999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHH
Q 010112 378 MGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGA 457 (518)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 457 (518)
.+..+.+++.++..... +.....+.- +..+.+.....+....++.|.+|+++|+++.++......+|.++++
T Consensus 88 ~~~~~~~~~~~~~~~~~-------~~~~l~~~r-~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~ 159 (426)
T PRK12307 88 WSIVAYSVGTGLSGLAS-------GVIMLTLSR-FIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAA 159 (426)
T ss_pred HHHHHHHHHHHHHHHHh-------HHHHHHHHH-HHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHH
Confidence 99999888887766654 222232222 2333333334556667889999999999999999999999999999
Q ss_pred hhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHH
Q 010112 458 FGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVN 493 (518)
Q Consensus 458 ~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (518)
.+.+.+. +..+|+..|++.....
T Consensus 160 ~l~~~l~-------------~~~~w~~~f~i~~~~~ 182 (426)
T PRK12307 160 YFMPSFA-------------EAYGWRAAFFVGLLPV 182 (426)
T ss_pred HHHHHHc-------------ccCCHHHHHHHHHHHH
Confidence 9988886 4568999887754433
No 166
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.28 E-value=5.7e-11 Score=115.25 Aligned_cols=177 Identities=12% Similarity=0.050 Sum_probs=126.8
Q ss_pred HHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHH
Q 010112 298 LFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQM 377 (518)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 377 (518)
++...+..+......+......|.+.++.|+++.+.+. ......++..++.++.|++.||+|||+.+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~ 72 (382)
T PRK10091 5 ILSLALGTFGLGMAEFGIMGVLTELAHDVGISIPAAGH------------MISYYALGVVVGAPIIALFSSRYSLKHILL 72 (382)
T ss_pred HHHHHHHHHHHHhhHHHHHhChHHHHHHcCCCHHHHhH------------HHHHHHHHHHHHHHHHHHHHccCccHHHHH
Confidence 34444455555555556666778888888877665333 566667778889999999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHH
Q 010112 378 MGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGA 457 (518)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 457 (518)
.+..+.+++.++..... +.+...+.-.+.+...+. ..+.......|.+|+++|+.++++......++..++|
T Consensus 73 ~~~~~~~~~~~l~~~~~-------~~~~l~~~r~l~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 144 (382)
T PRK10091 73 FLVALCVIGNAMFTLSS-------SYLMLAIGRLVSGFPHGA-FFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGI 144 (382)
T ss_pred HHHHHHHHHHHHHHHhC-------cHHHHHHHHHHHHhhhHH-HHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhc
Confidence 99999888887776654 233333333332222222 2344456678889999999999999998999999999
Q ss_pred hhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 458 FGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 458 ~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
.+.+.+. +..+|+..|.+.+++.++..+..+ .+||.+
T Consensus 145 ~l~~~l~-------------~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 145 PLGTYLS-------------QEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred cHHHHHh-------------hhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 9998887 456899999998887776665544 567654
No 167
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.27 E-value=3.9e-10 Score=110.60 Aligned_cols=160 Identities=16% Similarity=0.186 Sum_probs=135.7
Q ss_pred HHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchh--hHHHHHHHHHHHHHHHhhh-
Q 010112 41 CISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRK--KVYGITLILMVISSIASGL- 117 (518)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr--~~~~~~~~l~~i~~~~~~~- 117 (518)
.+......-.+++ +++..+...+.-+..+..++|++++|++.||+|.| +++.++++++.+..+...+
T Consensus 300 i~~~~~i~a~~~l----------g~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G 369 (477)
T PF11700_consen 300 IISFAGIYATEVL----------GMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFG 369 (477)
T ss_pred HHHHHHHHHHHhc----------CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHH
Confidence 3344444455577 99999999999999999999999999999999999 8999888888665555444
Q ss_pred -------ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010112 118 -------SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAF 190 (518)
Q Consensus 118 -------~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~ 190 (518)
.++ -+.+.+.-++.|+..|...+...++.+|..|+++.+..+|++....-....+||++-+.+.+..
T Consensus 370 ~~~~~~g~~~------~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~t 443 (477)
T PF11700_consen 370 FWPSFFGLKS------PWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDAT 443 (477)
T ss_pred hhhcccCccc------HHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344 5889999999999999999999999999999999999999999999999999999999999877
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCC
Q 010112 191 DHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPE 238 (518)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~e 238 (518)
++ -|+.+....++.++.+++..++++
T Consensus 444 g~----------------------~r~g~~~l~~lf~~gl~ll~~v~~ 469 (477)
T PF11700_consen 444 GS----------------------QRYGFLFLLVLFLIGLILLFFVDV 469 (477)
T ss_pred CC----------------------chhHHHHHHHHHHHHHHHHhhccc
Confidence 64 778888877777777766666654
No 168
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.27 E-value=2.6e-11 Score=111.64 Aligned_cols=176 Identities=10% Similarity=0.086 Sum_probs=133.4
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhH
Q 010112 296 LHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAI 375 (518)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 375 (518)
+.++.+.+.+......=-.+..-.|.+.++.+++..+.+. ......+.--++.++.|.++||.+.|+.
T Consensus 29 qif~~~fiGYa~fYl~RknF~~a~p~l~e~~~lsk~~lG~------------i~s~f~i~YG~sKf~~G~~sDr~npr~f 96 (448)
T COG2271 29 QIFLSIFIGYAAFYLTRKNFNLAMPALIEDGGLSKTQLGI------------LGSAFSITYGVSKFVMGVLSDRSNPRYF 96 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhHhhccHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHhhhhcccCCCcee
Confidence 3444455555544444455677788888887777766544 3444444455577789999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHH
Q 010112 376 QMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIV 455 (518)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 455 (518)
+..++++++++.+++++.. +.....++..+-+.+.+.++ |.....+..-+|+++||+..++-|+..++|+.+
T Consensus 97 m~~gLilsai~nil~Gfs~-------s~~~~~~l~~lng~fQg~Gw-pp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal 168 (448)
T COG2271 97 MAFGLILSAIVNILFGFSP-------SLFLFAVLWVLNGWFQGMGW-PPCARTITHWFSRKERGTWWSIWNTSHNIGGAL 168 (448)
T ss_pred ehHHHHHHHHHHHHHhhhh-------HHHHHHHHHHHHHHHhcCCC-cHHHHHHHHHcCccccCceEEEehhhhhcccch
Confidence 9999999999999998876 33445555566666777765 455567778889999999999999999999999
Q ss_pred HHhhh--HhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcc
Q 010112 456 GAFGF--LYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVP 504 (518)
Q Consensus 456 ~~~~~--g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~ 504 (518)
.|.+. +.+. ++.+|+..|++-++++++..++.+ ..+
T Consensus 169 ~~~~~~la~~~-------------~~~~w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 169 APLVALLAFFA-------------FHGGWRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred HHHHHHHHHHH-------------hccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999 7776 455999999999998888777776 443
No 169
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.27 E-value=4e-10 Score=113.13 Aligned_cols=172 Identities=15% Similarity=0.042 Sum_probs=120.5
Q ss_pred HHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccC
Q 010112 41 CISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFG 120 (518)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~ 120 (518)
......|.+.++. +.+....++......++..++.++.|+++||+|||++++.+.++.+++.++.+....
T Consensus 289 ~~~~~~p~i~~~~----------g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~ 358 (479)
T PRK10077 289 VVLYYAPEIFKTL----------GASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFY 358 (479)
T ss_pred HHHHHHHHHHHHc----------CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHh
Confidence 3344557777777 888777778888888899999999999999999999999999999888877654321
Q ss_pred CchhhHHHHHHHHHHHhhhcccc-ccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 010112 121 KSAKGVIATLCFFRFWLGFGIGG-DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPY 199 (518)
Q Consensus 121 ~~~~~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~ 199 (518)
.+.. ......+-++.+.+.+. ..+....++.|.+|+++|++++++......+|..+++.+.+.+.+. +.
T Consensus 359 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~-~~------- 428 (479)
T PRK10077 359 TQAP--GIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKN-SW------- 428 (479)
T ss_pred cCcc--cHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-cc-------
Confidence 1000 11222333344443333 2367889999999999999999999999999999987776554310 00
Q ss_pred CCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCCCcc
Q 010112 200 SVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPETAR 241 (518)
Q Consensus 200 ~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~esp~ 241 (518)
..+..+|+..|++.++.+++..+. .++.||+++
T Consensus 429 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~ 462 (479)
T PRK10077 429 ---------LVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKG 462 (479)
T ss_pred ---------hhhhccCccHHHHHHHHHHHHHHHHHhccccCCC
Confidence 012456888888877766665554 345677643
No 170
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.26 E-value=2.6e-10 Score=106.43 Aligned_cols=163 Identities=16% Similarity=0.126 Sum_probs=133.0
Q ss_pred hhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHH
Q 010112 33 FTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISS 112 (518)
Q Consensus 33 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~ 112 (518)
+...-....+.++-|.+++.. |.+.+..+++.-.+.++..+|...+|+++|| +.|+.+.....+.++..
T Consensus 222 l~~~g~F~~ftYi~P~L~~v~----------g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~ 290 (394)
T COG2814 222 LFMTGHFALYTYIRPFLESVA----------GFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALAL 290 (394)
T ss_pred HHHcchhhhHHhHHHHHHHcc----------CCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHH
Confidence 333444566778888888888 9999999999999999999999999999999 99999999988888888
Q ss_pred HHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 010112 113 IASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDH 192 (518)
Q Consensus 113 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~ 192 (518)
+...+..++ .+..++.-++.|+............+++ .-++.+..+.++.....++|..+|..+++.+.+.
T Consensus 291 l~l~~~~~~-----~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~--- 361 (394)
T COG2814 291 LALTFTGAS-----PALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDA--- 361 (394)
T ss_pred HHHHHhcch-----HHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh---
Confidence 887777664 5666667777888766655555555666 3368899999999999999999999999999854
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhc
Q 010112 193 HFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMR 235 (518)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~ 235 (518)
+|++...++.+++.++..++...
T Consensus 362 --------------------~g~~~~~~~~a~l~~~a~~~~~~ 384 (394)
T COG2814 362 --------------------LGYAATGWVGAALLLLALLLALL 384 (394)
T ss_pred --------------------hchHHHHHHHHHHHHHHHHHHHH
Confidence 44999999999888877665443
No 171
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.26 E-value=9.7e-11 Score=114.22 Aligned_cols=166 Identities=8% Similarity=0.011 Sum_probs=116.5
Q ss_pred HHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHH
Q 010112 310 IAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFA 389 (518)
Q Consensus 310 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 389 (518)
..........|.+.++.+.++.+.+ .......++..++.++.|+++||+|||+.+..+..+..++.++
T Consensus 17 ~~~~~~~~~lp~~~~~~~~s~~~~~------------~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~ 84 (392)
T PRK10473 17 AGIDMYLVGLPRIAADLNASEAQLH------------IAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLL 84 (392)
T ss_pred HHHHHHhhhHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHH
Confidence 3333444567777777776654422 2455556677778889999999999999999988888877777
Q ss_pred HhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC
Q 010112 390 LAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP 469 (518)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~ 469 (518)
..... +.........+ .+.......+..+.+..|.+|+++|+++.++.+....++..++|.+.+.+.
T Consensus 85 ~~~~~-------~~~~~~~~~~l-~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~----- 151 (392)
T PRK10473 85 CSLAE-------TSSLFLAGRFL-QGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIM----- 151 (392)
T ss_pred HHHhC-------cHHHHHHHHHH-HHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 65543 22222222222 222222234456678899999999999999999999999999999988876
Q ss_pred CcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCCC
Q 010112 470 TKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESKG 508 (518)
Q Consensus 470 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 508 (518)
+..+|+..+.+.+++.++..++.+ +.||+++
T Consensus 152 --------~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 183 (392)
T PRK10473 152 --------LKFPWQSLFYTMAAMGILVLLLSLFILKETRP 183 (392)
T ss_pred --------hCcChHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 356899989888887777766654 5666543
No 172
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.26 E-value=1.1e-10 Score=114.29 Aligned_cols=161 Identities=11% Similarity=0.091 Sum_probs=112.5
Q ss_pred HHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcc
Q 010112 315 QNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPY 394 (518)
Q Consensus 315 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (518)
.....|.+.++.+.++.+.+. ......++..++.++.|.++||+|||+.+..+..+.+++.+......
T Consensus 32 ~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~ 99 (406)
T PRK15402 32 IQPGMLAVVEDFNAGAEWVPT------------SMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ 99 (406)
T ss_pred HhcchHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc
Confidence 334456666777776554222 44556667777888999999999999999998888777777665543
Q ss_pred ccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCC
Q 010112 395 HHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDA 474 (518)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 474 (518)
+....... .+..+.......+.......|.+|++.|.++.++......++..++|.+.+.+.
T Consensus 100 -------~~~~l~~~-~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~---------- 161 (406)
T PRK15402 100 -------SIEQFTLL-RFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALI---------- 161 (406)
T ss_pred -------cHHHHHHH-HHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------
Confidence 22222222 222222222233556677789999999999999998888899999999999887
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHh-hcccCCC
Q 010112 475 GYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESKG 508 (518)
Q Consensus 475 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 508 (518)
+..+|+..|++.+++.+++.+..+ ..||+++
T Consensus 162 ---~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (406)
T PRK15402 162 ---HVLPWRGMFVLFAALAALSFFGLWRAMPETAG 193 (406)
T ss_pred ---HccCccHHHHHHHHHHHHHHHHHHHhCCCCCc
Confidence 345899999988888877766554 5666543
No 173
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.24 E-value=1.5e-10 Score=113.04 Aligned_cols=177 Identities=9% Similarity=0.011 Sum_probs=117.9
Q ss_pred HHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHH
Q 010112 298 LFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQM 377 (518)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~ 377 (518)
.+.......+............|.+.++.++++.+.+. ......++..++.++.|+++||+|||+.+.
T Consensus 10 l~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~ 77 (394)
T PRK11652 10 LFMLVLLVAVGQMAQTIYVPAIADMARDLNVREGAVQA------------VMAAYLLTYGLSQLFYGPLSDRVGRRPVIL 77 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhhhHHHhcCChHHHH
Confidence 33333333333334333444567777788877665333 555666777788889999999999999999
Q ss_pred HHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHH
Q 010112 378 MGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGA 457 (518)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~ 457 (518)
.+..+..++.+...... +.........+.+ .......+....+..|.+++++++.+.+..+....++..++|
T Consensus 78 ~~~~~~~~~~~~~~~~~-------~~~~l~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 149 (394)
T PRK11652 78 VGMSIFILGTLVALFAH-------SLTVLIAASAIQG-LGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAP 149 (394)
T ss_pred HHHHHHHHHHHHHHHHc-------cHHHHHHHHHHHH-hhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98888777776655433 2222222222222 222222344455677888888999999999998899999999
Q ss_pred hhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 458 FGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 458 ~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
.+.+.+. +..||+..|.+.+++.++..+... +.||++
T Consensus 150 ~i~~~l~-------------~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 150 LIGGLLT-------------TLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred HHHHHHH-------------hccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 9999887 456899999888776665544433 667654
No 174
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.24 E-value=2e-10 Score=112.17 Aligned_cols=165 Identities=16% Similarity=0.065 Sum_probs=114.1
Q ss_pred HHHHhhhhhhhHHHHHHHhhh-hhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhh--HHH---
Q 010112 29 GMGFFTDAYDLFCISLVTKLL-GRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKK--VYG--- 102 (518)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~--~~~--- 102 (518)
.+..+.............|.. .+++ +.+..+.+++.+...++..++.++.|+++||+|||+ ...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 290 (399)
T TIGR00893 221 ALGQFLVNIGLGFFLTWFPTYLVQER----------GLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARK 290 (399)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHh----------cccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHH
Confidence 333444444444455555554 4556 888999999999999999999999999999999996 111
Q ss_pred ---HHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHH
Q 010112 103 ---ITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAG 179 (518)
Q Consensus 103 ---~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg 179 (518)
.+.++..+........++ .+..+....+.+.+.+ ..+....++.|.+|+++|+++.++.+....+|..++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~ 363 (399)
T TIGR00893 291 TAIIAGLVLSLLMFATNYVNI------PYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVG 363 (399)
T ss_pred HHHHHHHHHHHHHHHhccchh------HHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhh
Confidence 111111111111121222 3444444444445444 789999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH
Q 010112 180 GIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW 232 (518)
Q Consensus 180 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 232 (518)
|.+.+.+.+..+. |+..|++.++..++..+.
T Consensus 364 ~~i~g~l~~~~g~----------------------~~~~~~~~~~~~~~~~~~ 394 (399)
T TIGR00893 364 PIVIGAIAATTGS----------------------FAGALMVVAALALIGALS 394 (399)
T ss_pred hHHhhhhccCCCc----------------------hhHHHHHHHHHHHHHHHH
Confidence 9999998743321 888888877776665544
No 175
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.23 E-value=9.7e-10 Score=109.81 Aligned_cols=148 Identities=18% Similarity=0.160 Sum_probs=114.6
Q ss_pred CCCchhhHHHHH-HHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHh---hhccCCchhhHHHHHHHHHHHhhh
Q 010112 64 TLPPNVSAAVNG-VALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIAS---GLSFGKSAKGVIATLCFFRFWLGF 139 (518)
Q Consensus 64 ~~s~~~~g~~~s-~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~---~~~~~~~~~~~~~~l~~~r~l~G~ 139 (518)
|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.+.. +...+. .+.+.+.-++..+
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~-----~~~l~~~~~l~~~ 328 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKN-----LYSMGAAVFFENL 328 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcccc-----HHHHHHHHHHHHH
Confidence 999999999984 6678999999999999999999998777666655544332 233221 4455556666665
Q ss_pred ccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHH
Q 010112 140 GIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVL 219 (518)
Q Consensus 140 ~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f 219 (518)
+.|...+...++..+..+++.+++..++.+...++|..+++.+++.+.+..+ |+..|
T Consensus 329 ~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G-----------------------~~~~f 385 (491)
T PRK11010 329 CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHG-----------------------WPTFY 385 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----------------------hHHHH
Confidence 5565667778999999999999999999999999999999889999986444 99999
Q ss_pred HhhhHHHHHHHHHHhcCCCC
Q 010112 220 MVGALPAALTYYWRMRMPET 239 (518)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~es 239 (518)
.+.++.++..++...+++++
T Consensus 386 ~~~~~~~l~~l~~~~~~~~~ 405 (491)
T PRK11010 386 LFSVAAAVPGLLLLLVCRQT 405 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 99888888776665555544
No 176
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.22 E-value=3.7e-10 Score=109.60 Aligned_cols=121 Identities=7% Similarity=-0.076 Sum_probs=106.4
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.++.++ .+.+++..++.|++.+.
T Consensus 236 g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~------~~~~~~~~~l~g~~~~~ 309 (382)
T PRK11128 236 GYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTA------LPWLIVIQILHCGTFTV 309 (382)
T ss_pred CCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999998888888777 68888999999999998
Q ss_pred ccchhhHHhhhhcccccchhHHHHHH-HHHHHHHHHHHHHHHHHHhhcc
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVF-AMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~-~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
..+....++.+. +++++++..+... ....+|..+|+.+++.+.+..+
T Consensus 310 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g 357 (382)
T PRK11128 310 CHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG 357 (382)
T ss_pred HHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 888888988887 5666788888876 5567788999999999986554
No 177
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.22 E-value=8.7e-11 Score=112.56 Aligned_cols=163 Identities=12% Similarity=-0.002 Sum_probs=108.5
Q ss_pred HHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHH
Q 010112 311 AFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFAL 390 (518)
Q Consensus 311 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 390 (518)
.+.......|.+.++.++++.+.+. ......++..++.+..|+++||+|||+.+.........+.+..
T Consensus 6 ~~~~~~~~lp~i~~~~~~s~~~~g~------------~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~ 73 (368)
T TIGR00903 6 IWVTFSPVLSLVAEDIDVSKEELGL------------LAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRL 73 (368)
T ss_pred HHHHHHhhHHHHHHHhCcCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHH
Confidence 3344555677787888877655332 4555666777788889999999999987665544443332211
Q ss_pred hhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCC
Q 010112 391 AIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPT 470 (518)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~ 470 (518)
.... +....++.-.+. +..... .+......+|.+|+++|++++++.+....+|..+++.+.+.+.
T Consensus 74 ~~~~-------~~~~l~~~R~l~-G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~------ 138 (368)
T TIGR00903 74 LDPF-------NYEWLLACQLLA-ALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIY------ 138 (368)
T ss_pred HHhc-------cHHHHHHHHHHH-HhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------
Confidence 1111 222222222222 222221 2333455588899999999999999999999999999999987
Q ss_pred cCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 471 KRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 471 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
+..||+..|.+.+++.++..++.+ ++||..
T Consensus 139 -------~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 139 -------TAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred -------HccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 456999999998888777766555 677653
No 178
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.22 E-value=6.1e-11 Score=115.07 Aligned_cols=164 Identities=8% Similarity=-0.061 Sum_probs=117.9
Q ss_pred HHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHH
Q 010112 310 IAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFA 389 (518)
Q Consensus 310 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 389 (518)
..........|.+.++.|+++.+.+. ......++..++.++.|+++||+|||+.+..+..+.+++.++
T Consensus 9 ~~~~~~~~~~~~~~~~~g~s~~~~g~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 76 (379)
T TIGR00881 9 LVRKNFALAMPYLVEEIGLSKTDLGL------------LLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLF 76 (379)
T ss_pred HhHHhhhhhhHHHHHHhCCCHhHHHH------------HHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHH
Confidence 34445556677777777887765333 566667777788899999999999999999999888888877
Q ss_pred HhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHh-hhHhhhhcCC
Q 010112 390 LAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAF-GFLYAAQSKD 468 (518)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~-~~g~l~~~~~ 468 (518)
..... +.+...+. .+..+.......+...++..|.+|+++|+++.++.+....+|..++|. +.+.+.
T Consensus 77 ~~~~~-------~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---- 144 (379)
T TIGR00881 77 FGFST-------SLWVMAAL-WALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIA---- 144 (379)
T ss_pred HHHhh-------hHHHHHHH-HHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHH----
Confidence 76654 22333333 333333334456777789999999999999999999999999999995 545444
Q ss_pred CCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccC
Q 010112 469 PTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPES 506 (518)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (518)
+..+|+..|++.+++.++..+..+ +.+|+
T Consensus 145 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T TIGR00881 145 ---------ELYSWHWVFIVPGIIAIIVSLICFLLLRDS 174 (379)
T ss_pred ---------hcCCchhHHHHHHHHHHHHHHHHheeeCCC
Confidence 345888888888877766555544 55543
No 179
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.22 E-value=2.9e-10 Score=109.71 Aligned_cols=131 Identities=17% Similarity=0.180 Sum_probs=116.0
Q ss_pred HHHhhhhhh-hcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCc
Q 010112 44 LVTKLLGRI-YYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKS 122 (518)
Q Consensus 44 ~~~~~i~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~ 122 (518)
...|.+.++ + +.+..+.+++.+...++..++.++.+++.||+|||+.+..+..+.+++..+..+.++.
T Consensus 232 ~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 300 (365)
T TIGR00900 232 ALFPYVQSKYL----------GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPN- 300 (365)
T ss_pred HHhHHHHHHHh----------CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchh-
Confidence 455665554 6 8899999999999999999999999999999999999998888888888877776631
Q ss_pred hhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 010112 123 AKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSA 189 (518)
Q Consensus 123 ~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~ 189 (518)
++.+++..++.|++.+...+...+++.|.+|+++|++..++......+|..+++.+++.+.+.
T Consensus 301 ----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~ 363 (365)
T TIGR00900 301 ----FPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADH 363 (365)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888999999999999999999999999999999999999999999999999999998754
No 180
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.21 E-value=7.1e-10 Score=110.09 Aligned_cols=156 Identities=19% Similarity=0.125 Sum_probs=105.9
Q ss_pred hHHHHHHHhhhh-hhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc--chhhHH-HHHHHHHHHHHHH
Q 010112 39 LFCISLVTKLLG-RIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL--GRKKVY-GITLILMVISSIA 114 (518)
Q Consensus 39 ~~~~~~~~~~i~-~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~--Grr~~~-~~~~~l~~i~~~~ 114 (518)
........|.+. ++. |.+..+.++..+.+.++..++.++.|+++||+ |||+.. .....+..++.+.
T Consensus 269 ~~~~~~~~P~~l~~~~----------g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~ 338 (452)
T PRK11273 269 RYGILDWSPTYLKEVK----------HFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIV 338 (452)
T ss_pred HHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHH
Confidence 334445555544 446 78888999999999999999999999999999 555432 2222333333333
Q ss_pred hhh--ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHH-HHHHHHHHHhhcc
Q 010112 115 SGL--SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA-GGIVALIVSSAFD 191 (518)
Q Consensus 115 ~~~--~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~l-g~~l~~~l~~~~~ 191 (518)
..+ ..+ .+...++.++.|.+..........++.|.+|+++||++.|+.+....+|..+ +|.+.+.+.+..+
T Consensus 339 ~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g 412 (452)
T PRK11273 339 YWLNPAGN------PTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG 412 (452)
T ss_pred HHHhcccC------hHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc
Confidence 222 222 3444455555665433323334456789999999999999998888887654 7999999986555
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHH
Q 010112 192 HHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWR 233 (518)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~ 233 (518)
|+..|++.+..+++.++..
T Consensus 413 -----------------------~~~~f~~~~~~~~~~~~~~ 431 (452)
T PRK11273 413 -----------------------WDGGFMVMIGGSILAVILL 431 (452)
T ss_pred -----------------------chHHHHHHHHHHHHHHHHH
Confidence 9999988777776665543
No 181
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.20 E-value=2.7e-10 Score=113.85 Aligned_cols=172 Identities=12% Similarity=0.015 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhh-ccChh
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDY-MGRFA 374 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r~ 374 (518)
.++......++....+|....+.+.++. ++|+++.+.. . .............+++|++.|| +|||+
T Consensus 22 ~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~-----------~-~~~~~~~~~~~~~~~~G~LaDr~~G~r~ 89 (500)
T PRK09584 22 AFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSI-----------T-LFSSFSALVYGLVAIGGWLGDKVLGTKR 89 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-----------H-HHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 3455666667777888888888888874 4676554321 1 2222222222233578999999 59999
Q ss_pred HHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh--hhhhHHHHHHHHHHHH
Q 010112 375 IQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR--LRSTCHGISAAAGKAG 452 (518)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~g 452 (518)
.+..+.++.+++..++.+... . ...+.+.....+.+.....+...++..|.+|++ .|+.+.++.+...++|
T Consensus 90 ~~~~g~~~~~ig~~l~~~~~~------~-~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG 162 (500)
T PRK09584 90 VIMLGAIVLAIGYALVAWSGH------D-AGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIG 162 (500)
T ss_pred HHHHHHHHHHHHHHHHHHhcc------c-HHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHH
Confidence 999999888888777665431 1 112222222222333333455567888988754 3456788889999999
Q ss_pred HHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHH
Q 010112 453 AIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICT 500 (518)
Q Consensus 453 ~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 500 (518)
..++|.+.|++. +..||+..|.+.++..+++.+..
T Consensus 163 ~~~gp~i~g~l~-------------~~~g~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 163 SFFSMLATPWLA-------------AKYGWSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHHHHH-------------HhhCHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 45689999988776656655433
No 182
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.20 E-value=2.3e-10 Score=113.19 Aligned_cols=163 Identities=9% Similarity=0.003 Sum_probs=109.1
Q ss_pred HHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcc
Q 010112 315 QNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPY 394 (518)
Q Consensus 315 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (518)
.....|.+. +.|.++.+.+. ......++..++.++.|+++||+|||+.+..+.++.+++.++.....
T Consensus 46 ~~~~~p~~~-~~g~s~~~~g~------------~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~ 112 (438)
T TIGR00712 46 FALAMPYLV-EQGFSKGELGF------------ALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVP 112 (438)
T ss_pred HHhhhHHHH-HcCCCHhHhHH------------HHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccc
Confidence 344556554 34666655333 55666677778889999999999999999988888777776655432
Q ss_pred ccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCC
Q 010112 395 HHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDA 474 (518)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~ 474 (518)
.. ..+.....+...+.+...+. ..+.....+.|.+|+++|++++|+.+....+++.++|.+.+...+
T Consensus 113 ~~---~~~~~~l~~~~~l~g~~~g~-~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~--------- 179 (438)
T TIGR00712 113 WA---TSSIAIMFVLLFLNGWFQGM-GWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMA--------- 179 (438)
T ss_pred cc---cchHHHHHHHHHHHHHHhhc-chHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHH---------
Confidence 10 01111222222222222222 334455677889999999999999999999999999988876653
Q ss_pred CCCCcccchhHHHHHHHHHHHHHHHHh-hcccC
Q 010112 475 GYPAGIGVKNSLIMLGVVNFVGMICTL-CVPES 506 (518)
Q Consensus 475 ~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (518)
+..+|+..|++.++++++..+..+ ++||+
T Consensus 180 ---~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 180 ---WFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred ---HhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 234899999998888777655544 55553
No 183
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.20 E-value=2.3e-10 Score=112.03 Aligned_cols=140 Identities=15% Similarity=0.147 Sum_probs=102.9
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
....+.++..++.++.|+++||+|||+.+..+..+.+++.++..... +....++.-.+.+... ....+..+.
T Consensus 56 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~-------~~~~l~~~r~l~Gi~~-~~~~~~~~~ 127 (413)
T PRK15403 56 SVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT-------SMTQFLIARFIQGTSI-CFIATVGYV 127 (413)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC-------CHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 44455566677888999999999999999999888888777766554 2223333222222222 222344556
Q ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccC
Q 010112 428 VPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPES 506 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (518)
+..|.+|++++++++++.+....++..++|.+.+.+. +..||+..|++.+++.+++.+..+ .+||+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~-------------~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 128 TVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALM-------------HFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------HhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 7889999999999999999999999999999998887 346899999998888887776544 57776
Q ss_pred CC
Q 010112 507 KG 508 (518)
Q Consensus 507 ~~ 508 (518)
++
T Consensus 195 ~~ 196 (413)
T PRK15403 195 VK 196 (413)
T ss_pred cc
Confidence 43
No 184
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.19 E-value=5.4e-10 Score=110.75 Aligned_cols=121 Identities=17% Similarity=0.282 Sum_probs=104.4
Q ss_pred CchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccccc
Q 010112 66 PPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDY 145 (518)
Q Consensus 66 s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~ 145 (518)
+..+.+++.+...++..++.+++++++||+|||+++..+.++.+++.++..+.++. .+.+++..++.|++.+...
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~g~~~~~~~ 329 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSN-----LPLILVLIILAGFGQNFVT 329 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchh-----HHHHHHHHHHHHHHHHHHH
Confidence 45577788888899999999999999999999999999999888888777765432 5677788889999999888
Q ss_pred chhhHHhhhhcc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 146 PLSATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 146 ~~~~~~i~e~~~-------~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
+...++++|..+ ++++|...|+.+....+|..+++.+.+.+.+..+
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 330 GLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999875 4567999999999999999999999999987765
No 185
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.19 E-value=4.7e-10 Score=112.92 Aligned_cols=152 Identities=19% Similarity=0.162 Sum_probs=99.5
Q ss_pred HHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhh
Q 010112 75 GVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSE 154 (518)
Q Consensus 75 s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e 154 (518)
....++..++.++.++++||+|||++++.+..+.+++..+.++..+.... ...+...-+...++.....+....+.+|
T Consensus 342 ~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~E 419 (502)
T TIGR00887 342 IIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLST--HGFLAIYVLAQFFANFGPNATTFIVPGE 419 (502)
T ss_pred HHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcch--hHHHHHHHHHHHHHhcCCCchhhhhhhc
Confidence 34455667788999999999999999988888877777666543211000 0111111111122222234567778899
Q ss_pred hcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHh
Q 010112 155 YANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRM 234 (518)
Q Consensus 155 ~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 234 (518)
.+|++.|+++.++......+|.++++.+.+.+.+..+.+.. .+...++...|++.++++++..+..+
T Consensus 420 ~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------~~~~~~~~~~~~i~~~~~~~~~i~~~ 486 (502)
T TIGR00887 420 VFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKG-------------YPTGIWMGHVLEIFALFMFLGILFTL 486 (502)
T ss_pred cCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhcccccccc-------------ccccccchHHHHHHHHHHHHHHHHhe
Confidence 99999999999999999999999999999888743210000 00123456677777777766655566
Q ss_pred cCCCCcc
Q 010112 235 RMPETAR 241 (518)
Q Consensus 235 ~~~esp~ 241 (518)
++||++.
T Consensus 487 ~lpEt~~ 493 (502)
T TIGR00887 487 LIPETKG 493 (502)
T ss_pred EeccCCC
Confidence 7898754
No 186
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.19 E-value=2.3e-11 Score=113.05 Aligned_cols=171 Identities=15% Similarity=0.067 Sum_probs=131.2
Q ss_pred HhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhh
Q 010112 313 YSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAI 392 (518)
Q Consensus 313 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~ 392 (518)
|......+..-...+.++...+. +.....+...+.++++|++.||++|++++..|..+-.++.+..++
T Consensus 50 ~~iagv~~~v~~~fni~~s~~Gl------------l~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~f 117 (493)
T KOG1330|consen 50 YTIAGVLKEVQTYFNISDSELGL------------LQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGF 117 (493)
T ss_pred hhhhhhhHHHHHhcCCCchhccc------------hhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHH
Confidence 33333344444446677776555 666677777888999999999999999999999998888888877
Q ss_pred ccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcC
Q 010112 393 PYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKR 472 (518)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~ 472 (518)
... .+.+.+.=.+.+.+..++.|+...+++|.+|.++|+++.++.++....|..+|-.+...+.+.++
T Consensus 118 s~~--------Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~---- 185 (493)
T KOG1330|consen 118 SNH--------FWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTF---- 185 (493)
T ss_pred HHH--------HHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCcc----
Confidence 652 22334444445566677889999999999999999999999999999999999988888875332
Q ss_pred CCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCCCCChhhhc
Q 010112 473 DAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESKGRSLEELS 515 (518)
Q Consensus 473 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 515 (518)
.|++.|...+++.+++.++.+ +.+|.+++..+|.+
T Consensus 186 --------~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~ 221 (493)
T KOG1330|consen 186 --------WWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVD 221 (493)
T ss_pred --------ceEEEEEeehHHHHHHHHHHHhhccCcccccccccc
Confidence 499999999999999888877 67766655444443
No 187
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.19 E-value=3.1e-10 Score=110.63 Aligned_cols=163 Identities=13% Similarity=0.093 Sum_probs=112.4
Q ss_pred HHHHhHHhhHHHHH-HHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHH
Q 010112 310 IAFYSQNLFQKDIF-SAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMF 388 (518)
Q Consensus 310 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 388 (518)
...+....+.+.++ ++.|+++...+. ......+...+..+++|+++||+|||+.+..+..+.+++.+
T Consensus 24 ~~~~~~~~~~~~~~~~~~g~s~~~~gl------------~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~ 91 (400)
T PRK11646 24 LGFFVVFPLISIRFVDQLGWAAVMVGI------------ALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFA 91 (400)
T ss_pred HHHHHHHHHHHHHHHHHhCCcHHHHHH------------HHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHH
Confidence 34444444455444 456776554322 44445555566678899999999999999999999888887
Q ss_pred HHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCC
Q 010112 389 ALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKD 468 (518)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~ 468 (518)
.+.... +.+...+...+ .+.......|...+++.|.+|+++|+++.|+.+...++|..++|.+.+.+.+
T Consensus 92 ~~~~~~-------~~~~l~~~~~l-~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~--- 160 (400)
T PRK11646 92 TMAIAH-------EPWLLWLSCIL-SGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ--- 160 (400)
T ss_pred HHHHhc-------cHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---
Confidence 776543 22323332222 2322222345566778899999999999999999999999999999999972
Q ss_pred CCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccC
Q 010112 469 PTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPES 506 (518)
Q Consensus 469 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (518)
.+|+..|++.+.+.++..++.. +.||.
T Consensus 161 -----------~g~~~~f~~~~~~~~~~~i~~~~~~~~~ 188 (400)
T PRK11646 161 -----------YDFRLVCATGAVLFVLAAAFNAWLLPAY 188 (400)
T ss_pred -----------hhHHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 3788888888777766655444 55553
No 188
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.19 E-value=1.2e-08 Score=97.49 Aligned_cols=338 Identities=12% Similarity=0.075 Sum_probs=189.8
Q ss_pred HHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhh
Q 010112 74 NGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMS 153 (518)
Q Consensus 74 ~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~ 153 (518)
.++-+..+.+++++.+.+.|+.|.|..+.++..+.....+..-+.+. +.++..-.+.|+|.+..+...-.+++
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~N~-------y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFPNS-------YYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhcch-------HHHHHHHHHhhhhHHheecccceehh
Confidence 78888888999999999999999999999999999998888888776 78899999999999999999999999
Q ss_pred hhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCC-----CCCCcchHHHHhhhHHHHH
Q 010112 154 EYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAP-----EADYVWRIVLMVGALPAAL 228 (518)
Q Consensus 154 e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~wr~~f~~~~~~~~~ 228 (518)
|..+++.+.+..++.-+....+.++|..+-..+...-+.... ...++... ..+..-+..+.+...+..+
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l 202 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAI------ITDGTRRLVFEVLFIDFEIKVLFGVLLAISVL 202 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccc------cccchhhhhcchhhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999888888888887765554432221000 00000000 0000011111111111122
Q ss_pred HHHHHhcCCCCcchhhhhhccHH-HHHHHHHHHHhhhcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHH
Q 010112 229 TYYWRMRMPETARYTALVAKNAK-QAAADMSKVLQVELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFL 307 (518)
Q Consensus 229 ~~~~~~~~~esp~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (518)
.++...+.|.+... ..++..+ ...+.++ ...+.+++++ ++.+...++.
T Consensus 203 ~~i~~~~~p~~~~~--~~~~~~~~~~~~~l~----------------------~~~~l~~~~~-------ml~L~~~f~~ 251 (461)
T KOG3098|consen 203 SIINFDFLPSKDVV--NCKSSSETSFSELLK----------------------LTFKLLKTPK-------MLLLFPFFFY 251 (461)
T ss_pred HhhheeecCccchh--hhhhhccccHHHHHH----------------------HHHHHhcCHh-------HHHHHHHHHH
Confidence 22222233322110 0000000 0000000 0111111211 1112222221
Q ss_pred HHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhh---ccChhHHHHHHHHHH
Q 010112 308 LDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDY---MGRFAIQMMGFFFMT 384 (518)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr---~g~r~~~~~~~~~~~ 384 (518)
.+... ..|...+-....++... ..+......+..+..+++.+.+....+.+.+| +||++.+..+..+..
T Consensus 252 tG~~~---Sf~~~iypt~i~ft~~~-----~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~ 323 (461)
T KOG3098|consen 252 TGLET---SFWISIYPTCISFTRKL-----GSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHL 323 (461)
T ss_pred HHHHH---HHHHhccchhhhhhhhc-----cCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHH
Confidence 11111 11111111111111000 01111233446666677777777777777766 578888888777766
Q ss_pred HHHHHHhhcccccc---C-C------CchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHH
Q 010112 385 VFMFALAIPYHHWT---L-K------PNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAI 454 (518)
Q Consensus 385 ~~~~~~~~~~~~~~---~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~ 454 (518)
+..++......... . + ........+..+..++.........+.++...+ ++.|..+.++.-+-..++..
T Consensus 324 ~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~ 402 (461)
T KOG3098|consen 324 IGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASC 402 (461)
T ss_pred HHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHH
Confidence 66666554332111 0 0 011333444445556666667777888888888 55688888888887777777
Q ss_pred HHHhhhHhhh
Q 010112 455 VGAFGFLYAA 464 (518)
Q Consensus 455 ~~~~~~g~l~ 464 (518)
++-...+...
T Consensus 403 v~~f~~~~~~ 412 (461)
T KOG3098|consen 403 VAFFFSPYLL 412 (461)
T ss_pred HHhhhhhhhH
Confidence 7666655543
No 189
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.18 E-value=1.4e-10 Score=112.60 Aligned_cols=158 Identities=13% Similarity=0.084 Sum_probs=115.4
Q ss_pred hhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcccc
Q 010112 317 LFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHH 396 (518)
Q Consensus 317 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 396 (518)
...|.+.++.++++.+.+. ......++..++.++.|++.||+|||+.+..+..+.+++..++....
T Consensus 12 p~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~-- 77 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQM------------TLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQ-- 77 (377)
T ss_pred ccHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHc--
Confidence 4556677777776654332 55566677778889999999999999999999888888887776544
Q ss_pred ccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCC
Q 010112 397 WTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGY 476 (518)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 476 (518)
+.........+.+ .......+...++..|.+|+++|+++.++.+....+|..++|.+.+.+.
T Consensus 78 -----~~~~~~~~~~l~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~------------ 139 (377)
T PRK11102 78 -----TIDQLIYMRFLHG-LAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLL------------ 139 (377)
T ss_pred -----cHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------
Confidence 2222333333222 3223334556678899999999999999999999999999999999987
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 477 PAGIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 477 ~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
+..+|+..|.+.+++.++..+... +.||++
T Consensus 140 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 140 -VWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred -HHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 345888999888888777766554 566643
No 190
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.18 E-value=1e-09 Score=107.10 Aligned_cols=140 Identities=9% Similarity=-0.012 Sum_probs=116.2
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.+..+.|.+.++..+...++.++.|++.||+|||+.+.++.++.++...+...+++ .+.+++.+++.|++...
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~------~~~~~~~~~l~g~~~~~ 323 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATT------ALEVVILKMLHAFEVPF 323 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCC------hHHHHHHHHHHHHHHHH
Confidence 455667899999999999999999999999999999999999999888888777777 67888899999998776
Q ss_pred ccchhhHHhhhhcccccchhHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~-~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
.......+..+..+++.+++..+. .+....+|..+++.+++++.+..+ |+..|.+.
T Consensus 324 ~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G-----------------------~~~~f~~~ 380 (396)
T TIGR00882 324 LLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIG-----------------------FQGAYLVL 380 (396)
T ss_pred HHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcc-----------------------cHHHHHHH
Confidence 666666777888888888877665 567889999999999999986544 99999998
Q ss_pred hHHHHHHHHH
Q 010112 223 ALPAALTYYW 232 (518)
Q Consensus 223 ~~~~~~~~~~ 232 (518)
+++.++..+.
T Consensus 381 ~~~~~i~~~~ 390 (396)
T TIGR00882 381 GCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHH
Confidence 7776665443
No 191
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.18 E-value=6.1e-10 Score=98.28 Aligned_cols=153 Identities=14% Similarity=0.079 Sum_probs=121.8
Q ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHH
Q 010112 22 FTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVY 101 (518)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~ 101 (518)
|..+....+.....+ ..+.++..-|.+++.+ |+|.+|...+...-.+|..+| ++.|.+.|++|+|.++
T Consensus 2 W~~l~a~~~v~~~~G-t~Y~Fs~yS~~Lk~~l----------~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l 69 (250)
T PF06813_consen 2 WLSLVASIWVQLCSG-TTYTFSAYSPQLKSRL----------GYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVL 69 (250)
T ss_pred hhhHHHHHHHHHhcC-cccchhhhhHHHHHHh----------CCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHH
Confidence 555555555444444 4567788888999999 999999999999999999875 8889999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCchh-hHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHH
Q 010112 102 GITLILMVISSIASGLSFGKSAK-GVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGG 180 (518)
Q Consensus 102 ~~~~~l~~i~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~ 180 (518)
.+|.+...+|..+...+-+.... ..+|.+.+..++.|.+.+....++.....+.+| ++||++.|+.-...+++..+-.
T Consensus 70 ~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t 148 (250)
T PF06813_consen 70 LIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFT 148 (250)
T ss_pred HHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHH
Confidence 99999999999887765433211 226888888888888877777777777889998 5899999999999998887766
Q ss_pred HHHHHHH
Q 010112 181 IVALIVS 187 (518)
Q Consensus 181 ~l~~~l~ 187 (518)
.+...+.
T Consensus 149 ~i~~~~f 155 (250)
T PF06813_consen 149 QIYSAFF 155 (250)
T ss_pred HHHHHHc
Confidence 6655543
No 192
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.18 E-value=1.1e-09 Score=108.12 Aligned_cols=153 Identities=12% Similarity=0.055 Sum_probs=99.9
Q ss_pred HHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeecc
Q 010112 350 LIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVP 429 (518)
Q Consensus 350 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 429 (518)
....++..++.+++|++.||+|||+.+..+..+.+++.++..+...+..........+.+.-+..+.+..+..+...+++
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i 149 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYM 149 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHH
Confidence 44556677899999999999999999999999998888887665421000000011222232333344444567777899
Q ss_pred ccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccCC
Q 010112 430 AEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPESK 507 (518)
Q Consensus 430 ~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (518)
.|.+|+++|+.+.++.......|..+++.+...+........ .+..||+..|.+.++..++...+....||++
T Consensus 150 ~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~-----~~~~gWr~~F~i~~~~~ll~~~~~~~~~e~~ 222 (432)
T PRK10406 150 SEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAE-----LREWGWRIPFALGAVLAVVALWLRRQLDETS 222 (432)
T ss_pred HHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHH-----HhccchHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 999999999999998887777777877776555432111000 0246999999987777666544333556543
No 193
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.18 E-value=1e-09 Score=108.94 Aligned_cols=152 Identities=14% Similarity=0.113 Sum_probs=132.5
Q ss_pred HHHHHHhhhhh-hhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhcc
Q 010112 41 CISLVTKLLGR-IYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSF 119 (518)
Q Consensus 41 ~~~~~~~~i~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~ 119 (518)
.+..++|.+.+ ++ +.+....|++.+++.+|..+|++..+.+.+|+++++.+..+.++++++.+..++++
T Consensus 236 a~~aLlPl~a~~~l----------~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~ 305 (524)
T PF05977_consen 236 AVWALLPLFARDVL----------GGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSP 305 (524)
T ss_pred HHHHhhhHHHHHHh----------CCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcch
Confidence 33455677654 56 88999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCC
Q 010112 120 GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPY 199 (518)
Q Consensus 120 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~ 199 (518)
+ .+..++.-++.|++.........+.+.+..|++.|||++++++.....+..+|..+.+.+.+..+
T Consensus 306 ~------~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g-------- 371 (524)
T PF05977_consen 306 S------FWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFG-------- 371 (524)
T ss_pred H------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--------
Confidence 8 78888899999999998888889999999999999999999999999999999999999987666
Q ss_pred CCCCCCCCCCCCCCcchHHHHhhhHHHHHHHH
Q 010112 200 SVDPVGSTAPEADYVWRIVLMVGALPAALTYY 231 (518)
Q Consensus 200 ~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~ 231 (518)
-+..+.+.++..++..+
T Consensus 372 ---------------~~~al~~a~~~lll~~~ 388 (524)
T PF05977_consen 372 ---------------VRTALLIAGAALLLSAL 388 (524)
T ss_pred ---------------HHHHHHHHHHHHHHHHH
Confidence 67777776665444433
No 194
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.15 E-value=3.8e-10 Score=109.74 Aligned_cols=135 Identities=10% Similarity=0.088 Sum_probs=96.8
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
......+...+..+++|++.||+|||+++..+..+.+++.+.+.... +. .... +..+.......|...+
T Consensus 43 ~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~-------~~---~~~r-~l~G~~~a~~~pa~~a 111 (393)
T PRK11195 43 LQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGI-------HP---LLAY-GLVGIGAAAYSPAKYG 111 (393)
T ss_pred HHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHH-------HH---HHHH-HHHHHHHHHHHHHHHH
Confidence 44555566677788999999999999999999888877666554432 11 1222 2233344445678888
Q ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccCC
Q 010112 428 VPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPESK 507 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (518)
++.|.+|+++|++++|+.+....++..+||.+.|.+.+ ..|...+.+.+.+.+++.+....+||.+
T Consensus 112 ~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~--------------~~~~~~~~i~~~~~~~~~~~~~~l~~~~ 177 (393)
T PRK11195 112 ILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD--------------PHAEAALAVCALIYLLAALFNLFIPRLG 177 (393)
T ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 99999999999999999999999999999999999984 1355566655555555544444666543
No 195
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.15 E-value=1.1e-09 Score=101.14 Aligned_cols=177 Identities=13% Similarity=0.178 Sum_probs=144.9
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHH
Q 010112 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGI 103 (518)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~ 103 (518)
+.++..-..+.++.+. .+......-..++ |++..+..++.....+..++|++++|+|.||+|.|+++..
T Consensus 255 ~~FLiA~~~~~DGv~t-il~~~~~fg~~~~----------gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~ 323 (438)
T COG2270 255 VLFLIARFFYIDGVNT-ILAMGGVFGAADL----------GLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMI 323 (438)
T ss_pred HHHHHHHHHHHhhHHH-HHHHHHHHHHHHc----------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehH
Confidence 3444444455565543 3333333344477 9999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHH
Q 010112 104 TLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVA 183 (518)
Q Consensus 104 ~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~ 183 (518)
++++..+.++...+... -..+.++-.+.|...|+....+.++..+.+|+++-++.+|++......+..+||.+-
T Consensus 324 ~lvi~~~~~~~~~~~~~------~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv 397 (438)
T COG2270 324 GLVILSIAALYLIFLEG------ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLV 397 (438)
T ss_pred HHHHHHHHHHHHHHccc------cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHH
Confidence 99999999988877776 366777889999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCC
Q 010112 184 LIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPET 239 (518)
Q Consensus 184 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~es 239 (518)
+.+.+..++ -|..+...+++..+.++....+|+.
T Consensus 398 ~v~t~iTg~----------------------~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 398 AVITQITGS----------------------SRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHhcc----------------------hhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999988775 6666666666666666666666654
No 196
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.15 E-value=2.1e-09 Score=104.72 Aligned_cols=146 Identities=15% Similarity=0.050 Sum_probs=108.6
Q ss_pred CCCchhhHHHHHHHH-HHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccc
Q 010112 64 TLPPNVSAAVNGVAL-CGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIG 142 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~-lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (518)
+++.++.|++..... ....++.++.|++.||+|+|+.+..+..+.++..+......+.........+.....+.+++.+
T Consensus 239 G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (390)
T TIGR02718 239 GWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITG 318 (390)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHH
Confidence 899999999988876 4667789999999999999999888777663333322211110000003444555666677777
Q ss_pred cccchhhHHhhhhccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHh
Q 010112 143 GDYPLSATIMSEYANK-KTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMV 221 (518)
Q Consensus 143 ~~~~~~~~~i~e~~~~-~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~ 221 (518)
...+...+.+.+..++ +++++.+++.+...++|..+||.+++.+.+..+ |+..|++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G-----------------------~~~~f~~ 375 (390)
T TIGR02718 319 ITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFG-----------------------YAGGFLS 375 (390)
T ss_pred HHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------------------cHHHHHH
Confidence 7778888888888876 889999999999999999999999999986555 8889988
Q ss_pred hhHHHHHHHHH
Q 010112 222 GALPAALTYYW 232 (518)
Q Consensus 222 ~~~~~~~~~~~ 232 (518)
.+++.++..+.
T Consensus 376 ~~~~~l~a~~~ 386 (390)
T TIGR02718 376 GTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHH
Confidence 77766665443
No 197
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.14 E-value=8e-10 Score=106.78 Aligned_cols=183 Identities=13% Similarity=0.110 Sum_probs=115.8
Q ss_pred HHHHHHHHHHHHHHhHHhhHHH-HHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHH
Q 010112 300 GTTSTWFLLDIAFYSQNLFQKD-IFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMM 378 (518)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 378 (518)
...+..+......+....+.|. +.++.++++.+.+. ......++..++.++.|++.||+|||+.+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~------------~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 72 (366)
T TIGR00886 5 FSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGN------------LVAVPVLAGAVLRIILGFLVDKFGPRYTTTL 72 (366)
T ss_pred HHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhH------------hhHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 3444455555566667777785 55667877665433 6666777888889999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 010112 379 GFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAF 458 (518)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 458 (518)
+.++..++.++...... +.....+. .+..+.... ..+....++.|.+|+++|+.+.++.....++|..+++.
T Consensus 73 ~~~~~~i~~~~~~~~~~------~~~~~~~~-~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~ 144 (366)
T TIGR00886 73 SLLLLAIPCLWAGLAVQ------SYSVLLLL-RLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQF 144 (366)
T ss_pred HHHHHHHHHHHHHHHhh------hHHHHHHH-HHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHH
Confidence 99888888777665430 11222222 222222222 23345578889999999999999999888888888888
Q ss_pred hhHhhhhcCCCCcCCCCCCCcccchhHH-HHHHHHHHHHHHHHh-hccc
Q 010112 459 GFLYAAQSKDPTKRDAGYPAGIGVKNSL-IMLGVVNFVGMICTL-CVPE 505 (518)
Q Consensus 459 ~~g~l~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~-~~~~ 505 (518)
+.+.+.+..... .+.++..+|+..+ +..+++..+..++.+ +.+|
T Consensus 145 i~~~l~~~~~~~---~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (366)
T TIGR00886 145 VMPPIIGSLIFG---AGLPAHLAWGWAFVIVPAGILLLPALLIFFVGAD 190 (366)
T ss_pred HHHHHHHHHHhc---ccccccccccchhHHHHHHHHHHHHHHHHHhccc
Confidence 777665321100 0001234788887 443444444333333 4443
No 198
>PRK11043 putative transporter; Provisional
Probab=99.14 E-value=7.9e-10 Score=108.19 Aligned_cols=154 Identities=11% Similarity=0.076 Sum_probs=107.1
Q ss_pred HHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccC
Q 010112 320 KDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTL 399 (518)
Q Consensus 320 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (518)
|.+.++.+.++.+.+ .......++..++.++.|+++||+|||+.+..+..+..++.++.....
T Consensus 30 ~~i~~~~~~s~~~~g------------~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~----- 92 (401)
T PRK11043 30 KAIQADLQTSASAVS------------ASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVE----- 92 (401)
T ss_pred HHHHHHHCCCHHHHH------------HHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhc-----
Confidence 344556666655422 255566777778899999999999999999988888777776665543
Q ss_pred CCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCc
Q 010112 400 KPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAG 479 (518)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~ 479 (518)
+.....+...+. +.......+....+..|.+|+++++...+..+....++..++|.+.+.+. +.
T Consensus 93 --~~~~l~~~~~l~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~-------------~~ 156 (401)
T PRK11043 93 --SAAQLLVLRFVQ-AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLL-------------NH 156 (401)
T ss_pred --CHHHHHHHHHHH-HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------hc
Confidence 222222222222 22211123344467788999998999999998888999999999999987 45
Q ss_pred ccchhHHHHHHHHHHHHHHHHhhcccC
Q 010112 480 IGVKNSLIMLGVVNFVGMICTLCVPES 506 (518)
Q Consensus 480 ~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (518)
.+|+..|.+.+++.++..+..++.+|.
T Consensus 157 ~g~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (401)
T PRK11043 157 FGWQAIFATLFAITLLLILPTLRLKPS 183 (401)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 689999988888877776666555443
No 199
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.13 E-value=1.2e-09 Score=103.34 Aligned_cols=133 Identities=14% Similarity=0.197 Sum_probs=102.3
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
.......+.++.-++.+++++|+|+-+++..++.+..+=++.+.... ++|..+.+=.+-+..... .+....+
T Consensus 411 ~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~-------n~W~vLPieilqgit~al-iWaa~~s 482 (618)
T KOG3762|consen 411 VSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQ-------NPWMVLPIEILQGITHAL-IWAAIIS 482 (618)
T ss_pred hhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhc-------CchheeeHHHHHHHHHHH-HHHHHHH
Confidence 66667778888888999999999999999998888877777766655 444444444443333333 3344557
Q ss_pred ccccccchhhhhhHHHHHHHHHH-HHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 428 VPAEIFPARLRSTCHGISAAAGK-AGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~-~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
|++...||+.|+++.|+...... +|-.+|+++.|.+. +.+|-+..|.++++.+++.+++..
T Consensus 483 Y~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v-------------~~fg~~ttf~~~giAcl~~l~~~~ 544 (618)
T KOG3762|consen 483 YASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVV-------------ERFGARTTFRIFGIACLVTLALFI 544 (618)
T ss_pred HHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhh-------------eeehhHHHHHHHHHHHHHHHHHHH
Confidence 88999999999999999887654 99999999999998 566778889988888887776655
No 200
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.12 E-value=2.9e-09 Score=99.43 Aligned_cols=119 Identities=13% Similarity=0.173 Sum_probs=98.4
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
++++.+.++..+.+..+..++.+..+++.||+|+||++.++..+..++.++....++ ... ..+-++.|++.+.
T Consensus 174 g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~------~~~-~~~~~l~g~~~s~ 246 (310)
T TIGR01272 174 GLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHG------YVA-MWFVLALGLFNSI 246 (310)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCC------HHH-HHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999888888888776666554 222 2355588999999
Q ss_pred ccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
.+|...+...+..|++ .+++.++. ....+|.++.|.+.+.+.+..+
T Consensus 247 i~P~~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g 292 (310)
T TIGR01272 247 MFPTIFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLG 292 (310)
T ss_pred HHHHHHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhcc
Confidence 9999999999988854 45666765 5667899999999999986544
No 201
>PRK15075 citrate-proton symporter; Provisional
Probab=99.12 E-value=3.9e-09 Score=104.31 Aligned_cols=138 Identities=15% Similarity=0.157 Sum_probs=97.9
Q ss_pred hhHHHHHHHhhhhh-hhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHH-h
Q 010112 38 DLFCISLVTKLLGR-IYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIA-S 115 (518)
Q Consensus 38 ~~~~~~~~~~~i~~-~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~-~ 115 (518)
.........|.+.+ .+ |.+..+.++....+.++..++.+++|+++||+|||+++..+.++..+.... .
T Consensus 253 ~~~~~~~~~p~~l~~~~----------g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~ 322 (434)
T PRK15075 253 SFYLITVYTPTFGKTVL----------HLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPAL 322 (434)
T ss_pred HHHHHHHHHHHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 33344455555443 46 888889999999999999999999999999999999987765544332221 1
Q ss_pred -h--hccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHH-HHHHHHHHHHHHHHHHhhcc
Q 010112 116 -G--LSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAM-QGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 116 -~--~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~-~~lG~~lg~~l~~~l~~~~~ 191 (518)
. ..++ +..+.+..++.|++.+...+....++.|.+|+++|++..++.... ..++..++|.+.+++.+..+
T Consensus 323 ~~~~~~~~------~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 323 SWLVAAPS------FARMLAVELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHcCCc------hHHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 1 1222 344444556666666666666778899999999999999986443 34457789999998886555
No 202
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.10 E-value=1.7e-09 Score=104.67 Aligned_cols=190 Identities=12% Similarity=0.033 Sum_probs=112.2
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHH-HhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFS-AIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAI 375 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~ 375 (518)
.++...+.+.......+......+.+-+ ++++++.+.+. ......+...+.++..|++.||+|.|+.
T Consensus 35 ~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~------------l~ai~~l~~al~rip~G~l~Dr~G~R~v 102 (462)
T PRK15034 35 NLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFL------------LTALPSVSGALLRVPYSFMVPIFGGRRW 102 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCChHH
Confidence 3343444444433444444444444444 56776655322 3333444444667788999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHH
Q 010112 376 QMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIV 455 (518)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 455 (518)
+..+.++..+..+...+.... ..++....+++..+.+. .+. ..+.....+++.+|+++||++.|+....+++|..+
T Consensus 103 ~~~~~ll~~i~~~~~~~a~~~--~~~s~~~lli~r~l~Gi-gg~-~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l 178 (462)
T PRK15034 103 TVFSTAILIIPCVWLGIAVQN--PNTPFGIFIVIALLCGF-AGA-NFASSMGNISFFFPKAKQGSALGINGGLGNLGVSV 178 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHcc--cCCCHHHHHHHHHHHHH-HHH-hHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHH
Confidence 999988888877777654100 00122333333333333 222 34556678899999999999999998777788877
Q ss_pred HHhhhHhhh-----hcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 010112 456 GAFGFLYAA-----QSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLC 502 (518)
Q Consensus 456 ~~~~~g~l~-----~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (518)
++.+.+.+. +..+.........+..+++.+.++...+.++..++.++
T Consensus 179 ~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~ 230 (462)
T PRK15034 179 MQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWS 230 (462)
T ss_pred HHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766665533 22221100000012446888888888877777766663
No 203
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.10 E-value=3.4e-10 Score=112.99 Aligned_cols=135 Identities=12% Similarity=0.014 Sum_probs=103.1
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
......++..++.+++|++.||+|||+.+..+.++.+++.++...... ......++.-+..+.......+....
T Consensus 81 ~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~~~G~~~~~~~~~~~~ 154 (465)
T TIGR00894 81 ILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAG------GGIALVVFCRVIQGLAQGSVSPATHK 154 (465)
T ss_pred HHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHH------cCchHHHHHHHHHHHhcccchhhHHH
Confidence 555666778888999999999999999999888877777666543321 11222333334444555556677778
Q ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCc-ccchhHHHHHHHHHHHHHHHHh
Q 010112 428 VPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAG-IGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
+..|.+|+++|++++|+.+....+|..++|.+.+.+.+ . .+|+..|.+.+++.++..+..+
T Consensus 155 ~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~-------------~~~gw~~~f~i~~~~~~~~~~~~~ 216 (465)
T TIGR00894 155 IIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCE-------------SWGGWPMIFYVFGIVGCAWSLLWF 216 (465)
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------------ccCCCCeehhhhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999873 4 3899999998888777666555
No 204
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.10 E-value=1.7e-09 Score=105.51 Aligned_cols=186 Identities=13% Similarity=0.018 Sum_probs=121.5
Q ss_pred HHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHH
Q 010112 299 FGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMM 378 (518)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~ 378 (518)
+.++..++...+.+.......|.+.++.+.++.+.+ .......++..++.+..+++.||+|||+.+..
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~~~~~~~s~~~~g------------~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~ 73 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQFQQAFTLTAFQAA------------LVQSAFYGGYFIMAIPAAIFMKKLSYKAGILL 73 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHhCchHHHHH
Confidence 444555555555555555677888777777655432 36677777888889999999999999999999
Q ss_pred HHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHh
Q 010112 379 GFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAF 458 (518)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~ 458 (518)
+..+.+++.+++..... .++...++....+.+...+. ..+....+..+..|+++|++..++.+....+|..++|.
T Consensus 74 g~~l~~~g~~l~~~~~~----~~~~~~~l~~~~l~G~g~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~ 148 (410)
T TIGR00885 74 GLFLYALGAFLFWPAAE----IMNYTLFLVGLFILTAGLGF-LETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMV 148 (410)
T ss_pred HHHHHHHHHHHHHHHHh----hccHHHHHHHHHHHHhhHHH-HHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888777543221 01222233333232222222 33444566778889999999999999999999999999
Q ss_pred hhHhhhhcCCCCcC-------------CCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 459 GFLYAAQSKDPTKR-------------DAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 459 ~~g~l~~~~~~~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
+.+.+......... .....+..+|+.+|.+.+++.++..+...
T Consensus 149 i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 149 VAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred HHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888632110000 00000234699999888887776655443
No 205
>TIGR00898 2A0119 cation transport protein.
Probab=99.09 E-value=2.1e-09 Score=108.57 Aligned_cols=140 Identities=16% Similarity=0.074 Sum_probs=109.9
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHh
Q 010112 73 VNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIM 152 (518)
Q Consensus 73 ~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i 152 (518)
......+...++.++.+++.||+|||+++.++.++.+++.++..+.++.. .+...+.-++.+++.+...+....+.
T Consensus 360 ~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (505)
T TIGR00898 360 DLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDL----YFLRTALAVLGKFGITSAFQMVYLYT 435 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCc----hHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445567778899999999999999999999999999988888776521 24445555666777777778889999
Q ss_pred hhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH
Q 010112 153 SEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW 232 (518)
Q Consensus 153 ~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 232 (518)
.|.+|++.|++++|+......+|.+++|.+.+ +.+ .++..++++.+...++..+.
T Consensus 436 ~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~------------------------~~~~~~~~~~~~~~~~~~~~ 490 (505)
T TIGR00898 436 AELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGE------------------------KWLFLPLVLFGGLALLAGIL 490 (505)
T ss_pred cccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHH------------------------HHHhhHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988 431 22556777777777776666
Q ss_pred HhcCCCCcc
Q 010112 233 RMRMPETAR 241 (518)
Q Consensus 233 ~~~~~esp~ 241 (518)
.+++||+..
T Consensus 491 ~~~lpet~~ 499 (505)
T TIGR00898 491 TLFLPETKG 499 (505)
T ss_pred HHcCcCCCC
Confidence 677888653
No 206
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=99.09 E-value=1.1e-08 Score=98.64 Aligned_cols=186 Identities=18% Similarity=0.162 Sum_probs=129.2
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhH
Q 010112 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKV 100 (518)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~ 100 (518)
|+...+.+.+......-+...+......+-++- |++..+..+..........+..+++..+.||+|||+.
T Consensus 268 R~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~a----------G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpL 337 (485)
T KOG0569|consen 268 RRPLLIGIVVSFAQQFSGINAIFFYSTSIFKTA----------GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPL 337 (485)
T ss_pred hHHHHHHHHHHHHHHhcCcceeHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH
Confidence 444333333333333333344444555555555 8999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhccCCchhh--HHH-HHHHHHHHh--hhccccccchhhHHhhhhcccccchhHHHHHHHHHHHH
Q 010112 101 YGITLILMVISSIASGLSFGKSAKG--VIA-TLCFFRFWL--GFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFG 175 (518)
Q Consensus 101 ~~~~~~l~~i~~~~~~~~~~~~~~~--~~~-~l~~~r~l~--G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG 175 (518)
++.+..++.+..+++.......... ... ..+++.++. .++.|. .|...-+.+|.+|++.|..+++......-+.
T Consensus 338 ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~-gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~ 416 (485)
T KOG0569|consen 338 LLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGP-GPIPWFIGAELFPQSARSAAQSVATAVNWLS 416 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCC-CchhHHHHHHhCCccchHHHHHHHHHHHHHH
Confidence 9999999998888876643321111 011 123333333 334443 5888899999999999999999999888888
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHH-HHHHhcCCCCcc
Q 010112 176 ILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALT-YYWRMRMPETAR 241 (518)
Q Consensus 176 ~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~-~~~~~~~~esp~ 241 (518)
..+-...-..+.+..++ +.|++..+++++. +..++.+||++.
T Consensus 417 ~fiv~~~fp~l~~~~g~------------------------~~filF~i~~~~~~i~~~~~lPETkg 459 (485)
T KOG0569|consen 417 NFIVGFAFPPLQNVIGP------------------------YVFILFVIPLAIFLIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHHHHHHHHHhcc------------------------hhhHHHHHHHHHHHHHHHHhCcccCC
Confidence 87777776666655552 5666666666655 445678999864
No 207
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.06 E-value=1.1e-09 Score=89.58 Aligned_cols=129 Identities=17% Similarity=0.186 Sum_probs=95.7
Q ss_pred HhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccc
Q 010112 353 LCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEI 432 (518)
Q Consensus 353 ~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (518)
.++.+++.+..+++.||+|||+.+..+.....++.+...... +.........+.+ .......+....+..|.
T Consensus 8 ~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~ 79 (141)
T TIGR00880 8 ALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSS-------NITVLIIARFLQG-FGAAFALVAGAALIADI 79 (141)
T ss_pred hhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhc-------cHHHHHHHHHHHH-HHHHHHHHhHHHHHHHH
Confidence 445566778899999999999999888887777776655433 2222333233322 22223456677788999
Q ss_pred cchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhh
Q 010112 433 FPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLC 502 (518)
Q Consensus 433 ~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 502 (518)
+|+++|+++.++.+....++..++|.+.+.+. +..+|+..+.+.+.+.+++.+...+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLA-------------QFLGWRAPFLFLAILALAAFILLAF 136 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHh-------------cccchHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999987 3457888888888877777766663
No 208
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.06 E-value=2.9e-09 Score=102.31 Aligned_cols=134 Identities=11% Similarity=0.122 Sum_probs=106.9
Q ss_pred HHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc-chhhHHHHHHHHHHHHHHHhhhcc
Q 010112 41 CISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL-GRKKVYGITLILMVISSIASGLSF 119 (518)
Q Consensus 41 ~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~ 119 (518)
......|.+.++. +.+..+.+.+.+...++..+++++.|++.||+ +||+.+..+.++.+++.++..+.+
T Consensus 215 ~~~~~lp~~~~~~----------g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (355)
T TIGR00896 215 SLIGWLPAILISH----------GASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAP 284 (355)
T ss_pred HHHHHHHHHHHHc----------CCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhh
Confidence 3344556666667 88999999999999999999999999999999 566777788888888877777665
Q ss_pred CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcc-cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 120 GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYAN-KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 120 ~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~-~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
+. ... ..-++.|++.+...+...+.+.+..+ +++++...++.+....+|..++|.+.+.+.+..+
T Consensus 285 ~~------~~~-~~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 285 MH------GLW-AWALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred hh------HHH-HHHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 52 222 24577899999988888887776554 5667899999888888999999999999987766
No 209
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.05 E-value=1.2e-08 Score=99.77 Aligned_cols=141 Identities=16% Similarity=0.131 Sum_probs=99.8
Q ss_pred CCCchhhHHHHHHHH-HHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHh---hhccCCchhhHHHHHHHHH----H
Q 010112 64 TLPPNVSAAVNGVAL-CGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIAS---GLSFGKSAKGVIATLCFFR----F 135 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~-lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~---~~~~~~~~~~~~~~l~~~r----~ 135 (518)
|++.++.+++.+... ++..++.+++|++.||+|||+.+..+..+..+..+.. ++.++. .+.+++.- +
T Consensus 241 G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~-----~~~~~~~~~~~~~ 315 (402)
T PRK11902 241 GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKH-----LWTMALAIGIENL 315 (402)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHH
Confidence 899999999987654 5689999999999999999998887777666554433 343321 45555444 3
Q ss_pred HhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcc
Q 010112 136 WLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVW 215 (518)
Q Consensus 136 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 215 (518)
..|++.+...+....++.+.+|.+++ ++.+...++|..+++.+++.+.+..+ |
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~~~~~~~~G~l~~~~G-----------------------~ 368 (402)
T PRK11902 316 CGGMGTAAFVALLMALCNRSFSATQY----ALLSALASVGRVYVGPTSGYLVEAYG-----------------------W 368 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhC-----------------------h
Confidence 45555566666667777777765544 55555556777777778888886655 9
Q ss_pred hHHHHhhhHHHHHHHHHHhcC
Q 010112 216 RIVLMVGALPAALTYYWRMRM 236 (518)
Q Consensus 216 r~~f~~~~~~~~~~~~~~~~~ 236 (518)
+..|.+.++++++.+++....
T Consensus 369 ~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 369 PGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999888887766554333
No 210
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.04 E-value=3.8e-09 Score=97.73 Aligned_cols=173 Identities=15% Similarity=0.111 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ 376 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 376 (518)
.++.....+.......+......+.+-++.++++.+... +.....+...+.++.-|++.||+|.|+..
T Consensus 15 ~L~~S~~af~v~F~VW~l~s~l~~~i~~~~~LS~~q~~l------------l~aiPil~GallRl~~g~l~drfGgR~~~ 82 (417)
T COG2223 15 NLWLSTLAFDVGFMVWTLFSPLGVFIKSDFGLSEGQKGL------------LVAIPILVGALLRLPYGFLTDRFGGRKWT 82 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccCCCHHHHHH------------HHHHHHHHhHHHHHHHHhhhcccCchHHH
Confidence 334344433333334444444455555667777776333 55556666667899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVG 456 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 456 (518)
..+.++..+-.+.+.+...+ ++.+.++.+ .+..+.. .+...+...++++.+|+|++|.++|++. .+|+|..+.
T Consensus 83 ~~s~~l~~IP~~~~~~a~~~----~~~~~ll~~-gll~G~~-GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~ 155 (417)
T COG2223 83 ILSMLLLLIPCLGLAFAVTY----PSTWQLLVI-GLLLGLA-GASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVA 155 (417)
T ss_pred HHHHHHHHHHHHHHHHHccC----CchHHHHHH-HHHHhcc-cceehcccccccccCChhhhhHHHHHhc-cccccHHHH
Confidence 99998888777777766531 122233333 3333322 2345567788999999999999999999 999999999
Q ss_pred HhhhHhhhhcCCCCcCCCCCCCccc---chhHHHHHHHHHHHHHHHHh
Q 010112 457 AFGFLYAAQSKDPTKRDAGYPAGIG---VKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 457 ~~~~g~l~~~~~~~~~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~ 501 (518)
..+.+.+.. ..+ |+.+..+.....++..+..+
T Consensus 156 q~~~P~v~~-------------~~g~~~w~~~~~i~~~~l~v~~v~~~ 190 (417)
T COG2223 156 QLVAPLVAV-------------AFGFLAWRNVAGIYVVALAIAAVLAW 190 (417)
T ss_pred HHHHHHHHH-------------HHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999884 345 88888888777777666665
No 211
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.03 E-value=1.7e-09 Score=106.79 Aligned_cols=176 Identities=15% Similarity=0.209 Sum_probs=151.0
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcc--hhhHH
Q 010112 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLG--RKKVY 101 (518)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~G--rr~~~ 101 (518)
.+....+...+..+...+....+|...++. +.+..+.+.+.++..+...++.+..|+++|+.. ++.+.
T Consensus 299 ~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~----------g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~ 368 (509)
T KOG2504|consen 299 KFLLLALSNLFAYLGFNVPFVYLPSYAKSL----------GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLF 368 (509)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----------CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHH
Confidence 344455555666666677777788888777 999999999999999999999999999999998 55668
Q ss_pred HHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHH
Q 010112 102 GITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGI 181 (518)
Q Consensus 102 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~ 181 (518)
.++++..+++.+.++++++ ++.++..-.+.|++.|.........+.|..+.++-..+.|+.....+++.++||+
T Consensus 369 ~~~ll~~gl~~~~~p~~~~------~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpP 442 (509)
T KOG2504|consen 369 LLTLLIAGLARLFLPFATT------YVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPP 442 (509)
T ss_pred HHHHHHHHHHHHHHHHhcc------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcc
Confidence 8888889999999999999 7999999999999999988888889999999999999999999999999999999
Q ss_pred HHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCC
Q 010112 182 VALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMP 237 (518)
Q Consensus 182 l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 237 (518)
+++.+.+..++ |...|+..++..++..+.++..|
T Consensus 443 iag~~~d~tg~----------------------Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 443 IAGLLYDITGN----------------------YDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred cceeeeeccCC----------------------eeeehhhcChHHHHHHHHHHHhH
Confidence 99987755443 88999998888877776655555
No 212
>PRK09848 glucuronide transporter; Provisional
Probab=99.02 E-value=7.1e-09 Score=102.92 Aligned_cols=124 Identities=12% Similarity=0.031 Sum_probs=101.7
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.+....++......++..++.++.+++.||+|+|+++.++.++..++.++..+.+.. +++.+++..++.|+|.+.
T Consensus 260 g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~----~~~~~~~~~~l~g~G~~~ 335 (448)
T PRK09848 260 NDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVW----SLPVALVALAIASIGQGV 335 (448)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCch----hHHHHHHHHHHHHHHHHH
Confidence 5555555555555567788899999999999999999999999988888877765421 156677778899999999
Q ss_pred ccchhhHHhhhhcccc-------cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 144 DYPLSATIMSEYANKK-------TRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~-------~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
..+...++.+|..|.+ ++|...++.+....+|..+|+.+.+.+.+..+
T Consensus 336 ~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 336 TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999998754 35899999999999999999999998887665
No 213
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.01 E-value=1.3e-08 Score=101.49 Aligned_cols=122 Identities=12% Similarity=0.055 Sum_probs=97.7
Q ss_pred CchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhh---ccCCchhhHHHHHHHHHHHhhhccc
Q 010112 66 PPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGL---SFGKSAKGVIATLCFFRFWLGFGIG 142 (518)
Q Consensus 66 s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~---~~~~~~~~~~~~l~~~r~l~G~~~g 142 (518)
+....+++.+...++..++.+++++++||+|+|+.+..+..+..++.+...+ ... ++.+.+++.-++.|++.+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~i~~~l~g~~~~ 339 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAP----HNALLIVIAGILLNIGTA 339 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCc----hhHHHHHHHHHHHHHHHH
Confidence 4556777777777899999999999999999999999888877766655433 111 115667777888999999
Q ss_pred cccchhhHHhhhhcc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 143 GDYPLSATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 143 ~~~~~~~~~i~e~~~-------~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
...+...++++|..+ .++.|...+......-+|..+++.+.+++.+..+
T Consensus 340 ~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 340 LFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999966 3334668899999999999999999999987766
No 214
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.01 E-value=1.3e-08 Score=97.96 Aligned_cols=173 Identities=13% Similarity=0.097 Sum_probs=131.1
Q ss_pred hhhhhhhHHHHHHHhhhhhhhcccCCCCCCCC-CCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHH
Q 010112 33 FTDAYDLFCISLVTKLLGRIYYHVDGAKKPGT-LPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVIS 111 (518)
Q Consensus 33 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~ 111 (518)
++.+.....+....+...++. + .+....+.+.+...++-++.-...+++..|+|.|+++.++.+.+++=
T Consensus 217 ~l~~~~~~~~~~f~~~yl~~~----------gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR 286 (400)
T PF03825_consen 217 FLIGISHAAYYTFFSIYLQEL----------GGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVR 286 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHc----------ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 334444444444444444554 4 67777888888888888899999999999999999999999999999
Q ss_pred HHHhhhc-cCCchhhHHHHH----HHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHH-HHHHHHHHHHHHHH
Q 010112 112 SIASGLS-FGKSAKGVIATL----CFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAM-QGFGILAGGIVALI 185 (518)
Q Consensus 112 ~~~~~~~-~~~~~~~~~~~l----~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~-~~lG~~lg~~l~~~ 185 (518)
..+.+.. ++ .+.. ++...+.|+..+........++.+.+|++.|+++.+++... .++|..+|..++|+
T Consensus 287 ~~l~a~~~~~------~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~ 360 (400)
T PF03825_consen 287 WLLYAYFSDP------WPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGW 360 (400)
T ss_pred HHHHHHhcCC------cHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 9998887 44 2333 33456799999999999999999999999999999998764 68999999999999
Q ss_pred HHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-HhcCCC
Q 010112 186 VSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMRMPE 238 (518)
Q Consensus 186 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~~~e 238 (518)
+.+..+. .....|...+.+.+.+.++..+. +++.+|
T Consensus 361 l~~~~g~-----------------~~~~~~~~~~~v~a~~~~~~~~~f~~~fk~ 397 (400)
T PF03825_consen 361 LYDAFGA-----------------RGMFDWSAVFLVFAVMALVILVLFVILFKP 397 (400)
T ss_pred HHHHhcc-----------------hhhhhHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 9987763 22344667777766665554443 344444
No 215
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.01 E-value=1.9e-09 Score=93.47 Aligned_cols=148 Identities=11% Similarity=0.112 Sum_probs=109.8
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHH
Q 010112 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGI 103 (518)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~ 103 (518)
++...++++.+..+-....++ ...++.| ++|+...+.+.+....-.++.+++.|.++||+|++...+.
T Consensus 268 ~~~iicv~yyva~fPFi~lg~--~fF~~rf----------GlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~ 335 (459)
T KOG4686|consen 268 VLVIICVLYYVAWFPFITLGP--MFFQKRF----------GLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVA 335 (459)
T ss_pred HHHHHHHHHHHHHHHHhhhhH--HHHHHhh----------CCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHH
Confidence 334444444443333333332 2467778 9999999999999999999999999999999999988766
Q ss_pred HHHHHHH-HHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 010112 104 TLILMVI-SSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIV 182 (518)
Q Consensus 104 ~~~l~~i-~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l 182 (518)
+..+..+ +-....+.. +.=..+..+.|+............++-..|.++.|++.+..+...++|.++.+++
T Consensus 336 ~a~~~tl~~H~~l~Ft~--------lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Ii 407 (459)
T KOG4686|consen 336 SACILTLLGHSGLFFTF--------LSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPII 407 (459)
T ss_pred HHHHHHHHHhhhHHhhh--------ccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhh
Confidence 6555443 333333332 3334566778887777666677788888999999999999999999999999999
Q ss_pred HHHHHhhcc
Q 010112 183 ALIVSSAFD 191 (518)
Q Consensus 183 ~~~l~~~~~ 191 (518)
++.+.+..+
T Consensus 408 ag~i~d~~g 416 (459)
T KOG4686|consen 408 AGFIADGDG 416 (459)
T ss_pred hheeecCCC
Confidence 999985443
No 216
>PRK10133 L-fucose transporter; Provisional
Probab=99.00 E-value=8.3e-09 Score=101.61 Aligned_cols=151 Identities=10% Similarity=-0.079 Sum_probs=102.6
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHH
Q 010112 297 HLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQ 376 (518)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~ 376 (518)
.+..+...++...+.........|.+.++++.++.+.+. ......++..++.+..|++.||+|||+.+
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~p~i~~~~~~s~~~~gl------------~~~~~~~g~~i~~~~~g~l~dr~G~r~~l 94 (438)
T PRK10133 27 PFALLCSLFFLWAVANNLNDILLPQFQQAFTLTNFQAGL------------IQSAFYFGYFIIPIPAGILMKKLSYKAGI 94 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhCcHHHH
Confidence 344455555666666677778889887777776654332 66677788888899999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHH
Q 010112 377 MMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVG 456 (518)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~ 456 (518)
..+..+..++.+++..... .++....+....+ .+.+.....+....++.|..|+++|...+++.+....+|..++
T Consensus 95 ~~g~~~~~~~~~l~~~~~~----a~~~~~ll~~r~l-~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g 169 (438)
T PRK10133 95 ITGLFLYALGAALFWPAAE----IMNYTLFLVGLFI-IAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIA 169 (438)
T ss_pred HHHHHHHHHHHHHHHHHHh----cCCHHHHHHHHHH-HHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHH
Confidence 9999998888876532110 0122222222222 2222222344455666777667766678999999999999999
Q ss_pred HhhhHhhh
Q 010112 457 AFGFLYAA 464 (518)
Q Consensus 457 ~~~~g~l~ 464 (518)
|.+.+.+.
T Consensus 170 ~~~g~~l~ 177 (438)
T PRK10133 170 VVFGQSLI 177 (438)
T ss_pred HHHHHHHH
Confidence 99987654
No 217
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.99 E-value=2.1e-08 Score=94.91 Aligned_cols=148 Identities=11% Similarity=0.103 Sum_probs=124.6
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.+....|.+.+...+.-++.-.+..++.+|+|.|+.++++..++++=.+.++++++ .+.+.+.+.+.|+-.+.
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~------~~~i~~~klLH~~e~~l 328 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATN------PWVISLIKLLHALEFPL 328 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--S------HHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcc------hHHHHHHHHHHHHHHHH
Confidence 456678999999999999999999999999999999999999999999999999999 79999999999999999
Q ss_pred ccchhhHHhhhhcccccchhHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAA-VFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~-~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
.......|+++.+|++..++...+ .+.+.++|..+.+.++|.+.+..+ .+..|++.
T Consensus 329 ~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-----------------------~~~tylim 385 (412)
T PF01306_consen 329 LLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-----------------------FQHTYLIM 385 (412)
T ss_dssp HHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-----------------------HHHHHHHH
T ss_pred HHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-----------------------cHHHHHHH
Confidence 999999999999999888787777 478889999999999999987776 88889887
Q ss_pred hHHHHHHHHH-HhcCCCCc
Q 010112 223 ALPAALTYYW-RMRMPETA 240 (518)
Q Consensus 223 ~~~~~~~~~~-~~~~~esp 240 (518)
+.+.+...++ .+.+++++
T Consensus 386 g~iv~~~~li~~f~l~~~~ 404 (412)
T PF01306_consen 386 GLIVLPFTLISAFTLKKDK 404 (412)
T ss_dssp HHHHHHHHHHHHHHS--SS
T ss_pred HHHHHHHHHHheeeecCCC
Confidence 7776655444 45555443
No 218
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.98 E-value=1.5e-08 Score=113.20 Aligned_cols=118 Identities=18% Similarity=0.136 Sum_probs=107.8
Q ss_pred CCCch-hhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccc
Q 010112 64 TLPPN-VSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIG 142 (518)
Q Consensus 64 ~~s~~-~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (518)
+.+.. +.+++.+...++..+++++.|+++||+++|+++.++.++.+++.++..+..+ .+.++++.++.|++.+
T Consensus 264 g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~g~~~~ 337 (1146)
T PRK08633 264 GLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPS------LASVLVLFFLFGFSAG 337 (1146)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhh------HHHHHHHHHHHHHHHH
Confidence 88888 9999999999999999999999999999999999998888888888887776 6788888999999999
Q ss_pred cccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
...+...+++.+.+|+++||+++++.+....+|.++++.+++.+.
T Consensus 338 ~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 338 LFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 988999999999999999999999999999999988888877665
No 219
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.98 E-value=4.8e-09 Score=107.43 Aligned_cols=180 Identities=13% Similarity=-0.012 Sum_probs=125.4
Q ss_pred HHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcc
Q 010112 315 QNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPY 394 (518)
Q Consensus 315 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (518)
.....+.+-+++++++.+.+. +.....++..++.++.+++.||.+||+.+.++.++.+++.+++++++
T Consensus 52 ~~~~l~~iek~F~lss~~~G~------------i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alph 119 (633)
T TIGR00805 52 VNSSLTTIERRFKLSTSSSGL------------INGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPH 119 (633)
T ss_pred HHhhchhhhhhhCCCCCccee------------eeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChH
Confidence 344556676778888887665 56666677777888999999999999999999999999998887764
Q ss_pred ccc----c--------------------C-----------------C--CchhHHHHHHHHHHHHHhcCccceeeecccc
Q 010112 395 HHW----T--------------------L-----------------K--PNRIGFVIMYSLTFFFANFGPNATTFVVPAE 431 (518)
Q Consensus 395 ~~~----~--------------------~-----------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (518)
... . . . ......+++.-++.+.+.....++..+++.|
T Consensus 120 f~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d 199 (633)
T TIGR00805 120 FLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDD 199 (633)
T ss_pred HhcCCccccccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhc
Confidence 100 0 0 0 0012233344445555555567788899999
Q ss_pred ccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC-C-------cCCCCCCCccc-chhHHHHHHHHHHHHHHHHhh
Q 010112 432 IFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP-T-------KRDAGYPAGIG-VKNSLIMLGVVNFVGMICTLC 502 (518)
Q Consensus 432 ~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~-~-------~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~ 502 (518)
.+|++.|+.+.|+.+....+|..+++.+.+.+.+.... . ..++..+...| |+..|++.+++.++..+..++
T Consensus 200 ~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~ 279 (633)
T TIGR00805 200 FAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFF 279 (633)
T ss_pred cCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999998854321 0 01111111223 777888888877776665555
Q ss_pred cccC
Q 010112 503 VPES 506 (518)
Q Consensus 503 ~~~~ 506 (518)
+|++
T Consensus 280 ~p~~ 283 (633)
T TIGR00805 280 FPKA 283 (633)
T ss_pred Cccc
Confidence 5543
No 220
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.95 E-value=3.4e-07 Score=87.87 Aligned_cols=382 Identities=11% Similarity=0.066 Sum_probs=189.2
Q ss_pred HHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHH
Q 010112 27 IAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLI 106 (518)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~ 106 (518)
.+....++...+.-...+..+.+..+.++ -+---.+...-.-.+..++.++..|.+.||..|.+++..+++
T Consensus 6 ~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p---------~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~ 76 (432)
T PF06963_consen 6 RLYLSHFLSTWGDRMWEFAVPLFLISIFP---------GSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLV 76 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC---------CCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHH
Confidence 34455666666666777777776665522 233334444444556677888999999999999999877766
Q ss_pred HHHHHH----HHhh--hccCCch---hhHHHHHHHHHHHhhhcccc-ccchhhHHhhhhc------ccccchhHHHHHHH
Q 010112 107 LMVISS----IASG--LSFGKSA---KGVIATLCFFRFWLGFGIGG-DYPLSATIMSEYA------NKKTRGAFIAAVFA 170 (518)
Q Consensus 107 l~~i~~----~~~~--~~~~~~~---~~~~~~l~~~r~l~G~~~g~-~~~~~~~~i~e~~------~~~~rg~~~~~~~~ 170 (518)
..-++. .+.. +...... ......+++.-.+.|.-.-. ......+.=.||. +++.+.+..+...-
T Consensus 77 ~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRR 156 (432)
T PF06963_consen 77 VQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRR 156 (432)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHH
Confidence 543222 2222 1111100 01122222222233321111 1122222234453 24455666666666
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH-Hhc----CCCCcchhhh
Q 010112 171 MQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW-RMR----MPETARYTAL 245 (518)
Q Consensus 171 ~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~-~~~----~~esp~~~~~ 245 (518)
.--+.-+++|++.+.+....+ .+....+.+...++.++. .++ ....|+ .
T Consensus 157 IDL~ckllaPl~vG~l~t~~s-----------------------~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~---L 210 (432)
T PF06963_consen 157 IDLFCKLLAPLFVGLLMTFAS-----------------------PVIAAIFIAGWNLASVFVEYFLLARVYNSVPA---L 210 (432)
T ss_pred HHHHHHHHHHHHHHHHhhccC-----------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH---h
Confidence 667889999999999975444 566666655555554433 111 122232 1
Q ss_pred hhccHHHHHHHHHHHHhh-hcchhhhHhhhhhhccCCcccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhHHhhHHHHHH
Q 010112 246 VAKNAKQAAADMSKVLQV-ELEAEEDKVAKLSQRDSNSFGLFSREFLKRHGLHLFGTTSTWFLLDIAFYSQNLFQKDIFS 324 (518)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (518)
+.+++++..+......+. +.+.+....+...+.-++..+.++. +.+. ..+...+...+..+...++......|+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~-Y~~q---~vflas~alalLY~TVLsf~~lmt~yl~ 286 (432)
T PF06963_consen 211 AVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRT-YFRQ---PVFLASFALALLYFTVLSFGGLMTAYLK 286 (432)
T ss_pred cCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHH-HHhC---HHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 111111000000000000 0000000000000000000011111 1111 2222233333333333344555666777
Q ss_pred HhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCc--
Q 010112 325 AIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPN-- 402 (518)
Q Consensus 325 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 402 (518)
+.|+++...+. .-....+.++.++++..++.+|+|..+.-..+......++.+..... +....+
T Consensus 287 ~~G~s~~~igi------------~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~--~~~~~~~~ 352 (432)
T PF06963_consen 287 SQGYSPSVIGI------------FRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSF--WAPGSPFS 352 (432)
T ss_pred HCCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHH--hcCCCCch
Confidence 77887765443 55556667778899999999999998887777766555444433222 111111
Q ss_pred hhH-H-HHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhH
Q 010112 403 RIG-F-VIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFL 461 (518)
Q Consensus 403 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g 461 (518)
... . +.......=.+-.++-.....+..|.+|+++||+..|+-+...++...+.-.+.-
T Consensus 353 ~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~i 413 (432)
T PF06963_consen 353 SISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTI 413 (432)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 1 1111111112222333344467789999999999999999999988777666643
No 221
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.95 E-value=1.1e-08 Score=98.41 Aligned_cols=110 Identities=13% Similarity=0.002 Sum_probs=89.9
Q ss_pred CCCchhhHHHHHHHH-HHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhcc-CCch----hhHHHHHHHHHHHh
Q 010112 64 TLPPNVSAAVNGVAL-CGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSF-GKSA----KGVIATLCFFRFWL 137 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~-lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~-~~~~----~~~~~~l~~~r~l~ 137 (518)
|.+.++.+.+.+... ++..++.+++|++.||+|||+.+..+.++.+++..+..+.. +.+. ....+.+..+.++.
T Consensus 240 g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 319 (356)
T TIGR00901 240 GFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLE 319 (356)
T ss_pred CCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHH
Confidence 899999998888766 67889999999999999999999988888887777655431 1000 00157788889999
Q ss_pred hhccccccchhhHHhhhhcccccchhHHHHHHHHHH
Q 010112 138 GFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQG 173 (518)
Q Consensus 138 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~ 173 (518)
+++.+...+...+++.|.+|+++||+.+++.+...+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 320 AVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 999999999999999999999999999999887653
No 222
>PRK09669 putative symporter YagG; Provisional
Probab=98.94 E-value=5.6e-08 Score=96.38 Aligned_cols=120 Identities=17% Similarity=0.197 Sum_probs=95.0
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhc-cCCchhhHHHHHHHHHHHhhhccccccc
Q 010112 68 NVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLS-FGKSAKGVIATLCFFRFWLGFGIGGDYP 146 (518)
Q Consensus 68 ~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~g~~~~ 146 (518)
+..+.+.....++..++.+++++++||+|+|+.+..+.++.++..+...+. ++. .+.+++..++.|++.+...+
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~i~g~~~~~~~~ 338 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSN-----VWLIFALNILFNFIQNLTTP 338 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcch-----HHHHHHHHHHHHHHHHHHHH
Confidence 344556667778888999999999999999999988887766544433332 221 67778888999999999999
Q ss_pred hhhHHhhhhcc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 010112 147 LSATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDH 192 (518)
Q Consensus 147 ~~~~~i~e~~~-------~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~ 192 (518)
...++++|..+ +++.|...+.......+|..+|+.+++.+.+..+.
T Consensus 339 ~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 339 LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999886 23346778889999999999999999999887763
No 223
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.94 E-value=2.4e-08 Score=97.47 Aligned_cols=197 Identities=13% Similarity=0.008 Sum_probs=120.9
Q ss_pred HHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhh----hccCh
Q 010112 298 LFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFID----YMGRF 373 (518)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d----r~g~r 373 (518)
++.+....+...+.+.....+.+.++++.|.++.. .........+..++..++.|+++| |+|||
T Consensus 6 li~~~~~~~Giq~~~~l~~~~l~~yl~~lg~~~~~------------~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR 73 (477)
T TIGR01301 6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAW------------ASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR 73 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHH------------HHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh
Confidence 44455555555666666677777788887876543 223566666777888899999999 59999
Q ss_pred hHHHHH-HHHHHHHHHHHhhcccccc-------CCCchh---HHHHHHHHHHHHHhcCccceeeeccccccchhhh--hh
Q 010112 374 AIQMMG-FFFMTVFMFALAIPYHHWT-------LKPNRI---GFVIMYSLTFFFANFGPNATTFVVPAEIFPARLR--ST 440 (518)
Q Consensus 374 ~~~~~~-~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~ 440 (518)
+..+.+ .....+++.++........ ...... ..+..+.+.....+. ..+...+++.|.+|+++| +.
T Consensus 74 rp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~-~~~p~rALiaDl~p~~~~~~~~ 152 (477)
T TIGR01301 74 RPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNM-LQGPCRAFLADLTGGDARRTRI 152 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHH-HHHHHHHhcccccCchhHHHHH
Confidence 998875 4555555555554332110 000111 111112222223332 233456889999998865 57
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhh--hhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 441 CHGISAAAGKAGAIVGAFGFLYA--AQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 441 ~~g~~~~~~~~g~~~~~~~~g~l--~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
+.++.+...++|+++++.+.+.. .+..+-........-..+++..|.+.+++.+++.+... ..+|+.
T Consensus 153 a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~ 222 (477)
T TIGR01301 153 ANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKENP 222 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccC
Confidence 99999999999999999998875 22111000000000112677889998888888887777 677754
No 224
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.92 E-value=3.1e-08 Score=94.48 Aligned_cols=160 Identities=8% Similarity=0.018 Sum_probs=115.0
Q ss_pred HHhhHHHHHHHhcCCCCC-cchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhc
Q 010112 315 QNLFQKDIFSAIGWIPPA-ATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIP 393 (518)
Q Consensus 315 ~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 393 (518)
..+..|.+.++.|+++.+ .+. ....+..+..+..+.+|+++||+|.|+.+..+.+..++..+++++.
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~------------I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa 112 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNE------------IIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLG 112 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcch------------HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHH
Confidence 444567777788998877 444 5555666667777789999999999999999999988888888876
Q ss_pred cccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCC
Q 010112 394 YHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRD 473 (518)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~ 473 (518)
. + ...+.+.=++.+.+..... ....++.+.+|+++|+++.|+.+....+|.++++++.+.+.. .+
T Consensus 113 ~-------S-l~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll~s-~g----- 177 (511)
T TIGR00806 113 T-------S-VWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLLVT-LG----- 177 (511)
T ss_pred H-------H-HHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cC-----
Confidence 4 2 2233333333344444334 667888899999999999999999999999999999999431 11
Q ss_pred CCCCCcccchhHHHHHHHHHHHHHHHHhhcccC
Q 010112 474 AGYPAGIGVKNSLIMLGVVNFVGMICTLCVPES 506 (518)
Q Consensus 474 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (518)
...|....++..+...+++++.+++|..
T Consensus 178 -----Wr~y~~Ln~Isl~s~~~a~~~a~~LP~~ 205 (511)
T TIGR00806 178 -----WISYSTLNIISLVFMTFSVFLALFLKRP 205 (511)
T ss_pred -----chhHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 1234444556666666677777777743
No 225
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.91 E-value=3.1e-09 Score=97.01 Aligned_cols=136 Identities=16% Similarity=0.092 Sum_probs=112.2
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
.+....+.+++.+++.|.+.||+|+|..+++|...+..+.+++++..+ .+.+++.=.+-+.++........+
T Consensus 111 LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~s--------y~~l~vAR~LQgvgsA~~~tsgla 182 (464)
T KOG3764|consen 111 LFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNS--------YPMLFVARSLQGVGSAFADTSGLA 182 (464)
T ss_pred HHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcch--------hHHHHHHHHHhhhhHHHHHhhhHH
Confidence 666677788889999999999999999999999999999999988763 334444444444444445566778
Q ss_pred ccccccchhh-hhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcc
Q 010112 428 VPAEIFPARL-RSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVP 504 (518)
Q Consensus 428 ~~~~~~p~~~-~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (518)
++++.+|++. |++++|+...+..+|-.++|.+.|.+. +..|++.+|+++++++++...+.+++-
T Consensus 183 mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilY-------------e~~Gk~aPFlVL~~v~Lld~~L~l~vi 247 (464)
T KOG3764|consen 183 MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILY-------------EFAGKSAPFLVLAIVLLLDGALQLLVI 247 (464)
T ss_pred HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchH-------------hhcCCcCcHHHHHHHHHHHHHHHHhee
Confidence 8999998765 799999999999999999999999998 466888999999999999988887543
No 226
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.91 E-value=1.6e-08 Score=99.78 Aligned_cols=147 Identities=13% Similarity=0.190 Sum_probs=121.1
Q ss_pred HHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHH
Q 010112 30 MGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMV 109 (518)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~ 109 (518)
+..++............+...++.. +.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~y~~~~vl---------~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~ 301 (428)
T PF13347_consen 232 LAFFLQWLAFALMNTFLPYYFTYVL---------GNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAA 301 (428)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHh---------cCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHH
Confidence 3344444455555555566555541 233 577888889999999999999999999999999999999999
Q ss_pred HHHHHhhhcc--CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhccc-------ccchhHHHHHHHHHHHHHHHHH
Q 010112 110 ISSIASGLSF--GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANK-------KTRGAFIAAVFAMQGFGILAGG 180 (518)
Q Consensus 110 i~~~~~~~~~--~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-------~~rg~~~~~~~~~~~lG~~lg~ 180 (518)
++.++..+.+ + .+.+++.-++.|++.+...+...++++|..+. ++.|...|.......+|..+++
T Consensus 302 ~~~~~~~~~~~~~------~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~ 375 (428)
T PF13347_consen 302 LGFLLLFFLGPGS------PWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAG 375 (428)
T ss_pred HHHHHHHHHHhhh------HHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHH
Confidence 9999988886 5 79999999999999999999999999999873 3458899999999999999999
Q ss_pred HHHHHHHhhccc
Q 010112 181 IVALIVSSAFDH 192 (518)
Q Consensus 181 ~l~~~l~~~~~~ 192 (518)
.+.+.+.+..+.
T Consensus 376 ~i~g~~l~~~Gy 387 (428)
T PF13347_consen 376 AIVGLLLALVGY 387 (428)
T ss_pred HHHHHHHHHhCc
Confidence 999988877663
No 227
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.90 E-value=1.4e-09 Score=101.00 Aligned_cols=123 Identities=13% Similarity=0.095 Sum_probs=95.2
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhh----hcchhhH-HHHHHHHHHHHHHHhhhccCCch-----------hhHH
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGD----KLGRKKV-YGITLILMVISSIASGLSFGKSA-----------KGVI 127 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~d----r~Grr~~-~~~~~~l~~i~~~~~~~~~~~~~-----------~~~~ 127 (518)
+++....+.+--...+...+.+|+.|..+| |+||||. +..+.++..++..+..++.+... .-..
T Consensus 63 Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai 142 (498)
T KOG0637|consen 63 GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAI 142 (498)
T ss_pred CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHH
Confidence 888888898888999999999999999999 5898877 45566666777777776644110 0113
Q ss_pred HHHHHHHHHhhhccccccchhhHHhhhhcccccchh-HHHHHHHHHHHHHHHHHHHHHHH
Q 010112 128 ATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGA-FIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 128 ~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~-~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
..++++--+.=++.......+-+++.|.+.+++|.+ +.+.+.....+|+.+|..++.++
T Consensus 143 ~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 143 VLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred HHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 455566666667777888899999999998777766 99999999999999998888744
No 228
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.90 E-value=2.1e-06 Score=87.58 Aligned_cols=153 Identities=14% Similarity=0.087 Sum_probs=120.0
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhh-cchhhHHHHHHHHHHHHHHHhhhccCCch--hhHHHHHHHHHHHhhhc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDK-LGRKKVYGITLILMVISSIASGLSFGKSA--KGVIATLCFFRFWLGFG 140 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~~ 140 (518)
+++.+....+...+....-+..+++|+++|+ +||++++.++.++..++.++.++...... .......+++-.+..+|
T Consensus 19 g~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G 98 (654)
T TIGR00926 19 GFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALG 98 (654)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhh
Confidence 8899999999999999999999999999996 79999999999999999988877532100 01123466778888899
Q ss_pred cccccchhhHHhhhhcccc---cchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchH
Q 010112 141 IGGDYPLSATIMSEYANKK---TRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRI 217 (518)
Q Consensus 141 ~g~~~~~~~~~i~e~~~~~---~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~ 217 (518)
.|++-|...+...|-++++ +|-....++..+.++|..+++.+..++.+..+.. ....+|..
T Consensus 99 ~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~f----------------g~~~~~~~ 162 (654)
T TIGR00926 99 TGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCF----------------GCQDCYPL 162 (654)
T ss_pred ccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccc----------------ccCcchHH
Confidence 9999999999999999754 3677888899999999999999988886432100 12346999
Q ss_pred HHHhhhHHHHHHHHH
Q 010112 218 VLMVGALPAALTYYW 232 (518)
Q Consensus 218 ~f~~~~~~~~~~~~~ 232 (518)
.|.+.++..+++++.
T Consensus 163 aF~i~~i~m~ia~lv 177 (654)
T TIGR00926 163 AFGVPAILMILALIV 177 (654)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999988877766554
No 229
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=98.87 E-value=3.2e-08 Score=110.15 Aligned_cols=118 Identities=18% Similarity=0.075 Sum_probs=103.0
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhc--------------------cCCch
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLS--------------------FGKSA 123 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~--------------------~~~~~ 123 (518)
+.+..+.|++.+.+.+|.++++++.|+++|+.++++.+..+.++.+++.+...+. .+
T Consensus 257 g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--- 333 (1140)
T PRK06814 257 GGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRH--- 333 (1140)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccc---
Confidence 8899999999999999999999999999999888877776666666655544442 33
Q ss_pred hhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 124 KGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 124 ~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
.+.++++.++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++.+.+.
T Consensus 334 ---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~ 394 (1140)
T PRK06814 334 ---GWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQ 394 (1140)
T ss_pred ---cHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778888999999999999999999999999999999999999999999999999988886
No 230
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=98.87 E-value=4.7e-09 Score=95.27 Aligned_cols=113 Identities=12% Similarity=-0.020 Sum_probs=90.4
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccc
Q 010112 344 IARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNA 423 (518)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518)
.++.....+.+..++.++..|.++||+|||.++.++.+..++...+.+... +. ...++.=+.++.+.. ...
T Consensus 69 yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~-------~F-~afv~aR~l~Gi~kg-nl~ 139 (451)
T KOG2615|consen 69 YAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR-------NF-AAFVLARFLGGIFKG-NLS 139 (451)
T ss_pred hhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH-------HH-HHHHHHHHhhhhccC-chH
Confidence 345577778888999999999999999999999999998888777776654 22 233332333444333 345
Q ss_pred eeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 424 TTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
+..++++|++++++|+.+++..+....+|.++||.+.|++.+
T Consensus 140 v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 140 VIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 677999999999999999999999999999999999999985
No 231
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.85 E-value=1e-07 Score=89.72 Aligned_cols=158 Identities=27% Similarity=0.397 Sum_probs=125.6
Q ss_pred hhhhHHHHHHHhhhhhhhcccCCCCCCCCCCc--hhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHH
Q 010112 36 AYDLFCISLVTKLLGRIYYHVDGAKKPGTLPP--NVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSI 113 (518)
Q Consensus 36 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~--~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~ 113 (518)
..+........+.+..++ +.+. ...++..+.+.++..+++++.|.++||+|||+.+..+.....++.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~ 84 (338)
T COG0477 15 GLDLGLLSPALPLLLSTL----------SLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTL 84 (338)
T ss_pred HHhcchHHHHHHHHHHHc----------CCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHH
Confidence 355666667777777766 4554 5899999999999999999999999999999888888876666666
Q ss_pred HhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhccc-ccchhHHHHHHH-HHHHHHHHHHHHHHHHHhhcc
Q 010112 114 ASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANK-KTRGAFIAAVFA-MQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 114 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-~~rg~~~~~~~~-~~~lG~~lg~~l~~~l~~~~~ 191 (518)
+..+..+ ...+.+++.|+++|++.+...+...+++.|+.|+ ++|+...+.... ...+|..+++.+++.+... .
T Consensus 85 ~~~~~~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 159 (338)
T COG0477 85 LLALAPN----VGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-L 159 (338)
T ss_pred HHHhCcc----chHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 6666655 1178999999999999999999999999999998 678999999888 5888889999888777644 1
Q ss_pred cCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHH
Q 010112 192 HHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAAL 228 (518)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~ 228 (518)
..+||..|.........
T Consensus 160 --------------------~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 160 --------------------LWGWRAAFLLAALLGLL 176 (338)
T ss_pred --------------------hcchHHHHHHHHHHHHH
Confidence 24499966665555433
No 232
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.82 E-value=4.4e-08 Score=88.53 Aligned_cols=133 Identities=18% Similarity=0.181 Sum_probs=100.6
Q ss_pred HHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhc
Q 010112 77 ALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYA 156 (518)
Q Consensus 77 ~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~ 156 (518)
..+.-.-|.++.+.+.||+|||+++..+.+++++..++.-.+.+... .-.++..+|++. .+.+.+.+.|..|.+
T Consensus 390 tslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~--~tvllf~arafi----sg~fqvaYvYtPEVy 463 (528)
T KOG0253|consen 390 TSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNA--YTVLLFTARAFI----SGAFQVAYVYTPEVY 463 (528)
T ss_pred HHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcch--hHHHHHHHHHHH----hchheEEEEecCccc
Confidence 34566789999999999999999999999999999998887766311 013345566553 445677899999999
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcC
Q 010112 157 NKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRM 236 (518)
Q Consensus 157 ~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~ 236 (518)
|.+-|+...|.-..+..+|.++.|.++ ...+.. -..+..+.+..++++.+..+++
T Consensus 464 PTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s------------------------~sl~i~vy~~~~ilagIavcff 518 (528)
T KOG0253|consen 464 PTAVRATGVGTCSSMARIGGIFSPVIA-MRAELS------------------------TSLPIFVYGALFILAGIAVCFF 518 (528)
T ss_pred chhhhhcchhhhhhHHhhhhhhhhHHH-HHhccc------------------------eeehHHHHHHHHHHHHHHheee
Confidence 999999999999999999999999998 222111 2245556666677777777778
Q ss_pred CCCc
Q 010112 237 PETA 240 (518)
Q Consensus 237 ~esp 240 (518)
|-.+
T Consensus 519 PiEt 522 (528)
T KOG0253|consen 519 PIET 522 (528)
T ss_pred eecc
Confidence 7433
No 233
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.79 E-value=5.4e-08 Score=96.54 Aligned_cols=130 Identities=11% Similarity=0.067 Sum_probs=109.6
Q ss_pred CCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCch----hhHHHHHHHHHHHh
Q 010112 62 PGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSA----KGVIATLCFFRFWL 137 (518)
Q Consensus 62 ~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~----~~~~~~l~~~r~l~ 137 (518)
+.|.++.+.|.+.+...++..++....+++.+|++.|+++.++.++.+++.+......+... ....+.++..-++.
T Consensus 282 ~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~ 361 (468)
T TIGR00788 282 CLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIA 361 (468)
T ss_pred cCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHH
Confidence 34999999999999999999999999999999999999999999999988866532211000 00023455667888
Q ss_pred hhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 138 GFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 138 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
+++.+........++.+.+|++++|+..++.....++|..+++.+++.+.+..+
T Consensus 362 ~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 362 EVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 888888899999999999999999999999999999999999999999998877
No 234
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.79 E-value=2.4e-08 Score=94.71 Aligned_cols=182 Identities=11% Similarity=0.002 Sum_probs=124.5
Q ss_pred hHHHHHHHHHHHHHHHHHhHHhhHHHHHHH-hcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhh-ccCh
Q 010112 296 LHLFGTTSTWFLLDIAFYSQNLFQKDIFSA-IGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDY-MGRF 373 (518)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr-~g~r 373 (518)
+.++.+...-+.--+.||+....+..|+.. .+ +. .+.+..+... ....+....-+..+++||++|| +|+|
T Consensus 21 r~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~--~g-Lg~~~~~A~~-----l~~~y~slVY~t~i~GG~laDr~LG~~ 92 (498)
T COG3104 21 RGLYLIFFVELWERFSYYGMRAILILYLYYQLG--DG-LGFDETHATG-----LFSAYGSLVYLTPIIGGWLADRVLGTR 92 (498)
T ss_pred chHHHHHHHHHHHHHhhhhhHHHHHHHHHHhcc--cc-CCcChHhhHH-----HHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 455666666677778999987776666654 33 11 1221111111 2222222233356688999999 5999
Q ss_pred hHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh--hhhhHHHHHHHHHHH
Q 010112 374 AIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR--LRSTCHGISAAAGKA 451 (518)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~g~~~~~~~~ 451 (518)
+.+..+.++..++.+++..... .... .+.+.......+....-+....+..|.+|++ .|..+.++..+..++
T Consensus 93 ~tI~lGail~~iGh~~L~~~~~-----~~~~-gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi 166 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISSV-----SGPG-GLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI 166 (498)
T ss_pred HHHHHHHHHHHHHHHHHhcccc-----cccc-HHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh
Confidence 9999999999999999987630 0112 2222222233444555667778888998743 477788888899999
Q ss_pred HHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcc
Q 010112 452 GAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVP 504 (518)
Q Consensus 452 g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (518)
|++++|.+.+++. +..||...|...++-+.++++..+..+
T Consensus 167 Gsl~~p~i~~~~~-------------~~~g~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 167 GSLIAPIITGLLA-------------INYGWHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHHHHHHH-------------HhhCHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999998 567899999999999999988877554
No 235
>PTZ00207 hypothetical protein; Provisional
Probab=98.78 E-value=1.1e-07 Score=95.07 Aligned_cols=164 Identities=12% Similarity=0.087 Sum_probs=101.6
Q ss_pred HHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHH
Q 010112 308 LDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFM 387 (518)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~ 387 (518)
.....|.+..+.+.+.+++|++..+.+. +... ..... ...+.+|++.||+|+|+++.++.++..++.
T Consensus 39 ~~g~~y~fsv~s~~L~~~lgls~~~l~~-----------i~sv-g~~~g-~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ 105 (591)
T PTZ00207 39 CTSFMYAFNLISGAMQARYNLTQRDLST-----------ITTV-GIAVG-YFLLPYSFIYDYLGPRPIFVLSMTVFCLGT 105 (591)
T ss_pred HHHHHHHHHHHHHHHHHHhCcCHHHHHH-----------HHHH-HHHHH-HHHHHHHHHHHHhCcHHHHHHHHHHHHHHH
Confidence 3445567778888888888887655222 1211 11111 245568999999999999999999999999
Q ss_pred HHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcC
Q 010112 388 FALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSK 467 (518)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 467 (518)
++.++...... ..+.+.+.+...+ .+.+.....+.....+.+.+| ++||.+.|+......+|+.+.+.+...+..
T Consensus 106 ll~ala~~~~i-~~s~~~l~l~r~l-~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-- 180 (591)
T PTZ00207 106 LLFALTFQEVI-EGSVVRLSVYNGL-MTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-- 180 (591)
T ss_pred HHHHHHhcccc-cCcHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 88877531100 0122222222222 222222223334455677786 679999999999999999865555544442
Q ss_pred CCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 468 DPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 468 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
.+++..|++.+++.++..++..
T Consensus 181 ------------~~~~~~fl~l~vl~~vv~ll~~ 202 (591)
T PTZ00207 181 ------------DNTSAYFFFLMSFALVVGILAI 202 (591)
T ss_pred ------------HhHHHHHHHHHHHHHHHHHHHH
Confidence 1466677777776666555544
No 236
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.76 E-value=7.9e-08 Score=95.46 Aligned_cols=150 Identities=14% Similarity=0.043 Sum_probs=97.0
Q ss_pred hhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcccc
Q 010112 317 LFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHH 396 (518)
Q Consensus 317 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 396 (518)
..++.+..++|-++... . ......++..+..++.|.++|.+|||..++.+.++..++.++.+...
T Consensus 65 ~~l~~I~~diG~~~~~~------------w-~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~-- 129 (599)
T PF06609_consen 65 SILPYINADIGGSDNWS------------W-FSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQ-- 129 (599)
T ss_pred HHHHHHHHhcCCCccch------------H-HHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCC--
Confidence 34455666666544321 1 33344455666677889999999999999999999999998887665
Q ss_pred ccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCC
Q 010112 397 WTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGY 476 (518)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~ 476 (518)
+...++....+.+.. .+........++|..|.+.|..+.++.....-....++|.+...+.
T Consensus 130 -----~~~~~iag~~l~Gvg--aG~~~~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~------------ 190 (599)
T PF06609_consen 130 -----NMNTFIAGMVLYGVG--AGVQELAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFA------------ 190 (599)
T ss_pred -----cHHHHHHHHHHHHHh--hHHHHHHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhc------------
Confidence 222333333332222 2233345556799999999988777666544444445555554443
Q ss_pred CCcccchhHHHHHHHHHHHHHHHHh
Q 010112 477 PAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 477 ~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
...+||+.|++.++...++++..+
T Consensus 191 -~~~~WRw~~~~~~i~~~i~~vl~~ 214 (599)
T PF06609_consen 191 -AHSGWRWIFYIFIIWSGIALVLIF 214 (599)
T ss_pred -cCCCcchHHHHHHHHHHHHHHHHH
Confidence 334899999988887777765544
No 237
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.75 E-value=5.9e-07 Score=86.13 Aligned_cols=125 Identities=18% Similarity=0.279 Sum_probs=107.3
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.++.+..+.......+..++.+++..+.+|+|+|+++..+.++..++.++..+.+. ++.+.+++..++.+++.+.
T Consensus 268 g~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~----~~~~l~~~~~~i~~~g~~~ 343 (467)
T COG2211 268 GDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPA----GSVVLIVVALIIAGVGTGI 343 (467)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcC----cchHHHHHHHHHHHHHhhc
Confidence 566667778888888888888999999999999999999999999999999988873 2278888899999999999
Q ss_pred ccchhhHHhhhhcc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 010112 144 DYPLSATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDH 192 (518)
Q Consensus 144 ~~~~~~~~i~e~~~-------~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~ 192 (518)
..+...++++|..+ .++-|...+......=+|.+++..+.++.....+.
T Consensus 344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999998875 23347778888888889999999999998887774
No 238
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.74 E-value=4.9e-08 Score=98.95 Aligned_cols=138 Identities=15% Similarity=0.193 Sum_probs=111.0
Q ss_pred HHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccce
Q 010112 345 ARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNAT 424 (518)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (518)
.........++.++|.++.|.++||+|||++++.+.++..++.+..++.. + .....+.=++.+++..+...+
T Consensus 120 ~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~-------~-~~~~~~~Rfl~G~~~~~~~~~ 191 (521)
T KOG0255|consen 120 VALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAP-------N-YWMFLIFRFLSGFFGSGPLTV 191 (521)
T ss_pred HHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhC-------c-HHHHHHHHHHHHhhccchhHH
Confidence 34466677788889999999999999999999999999999887777766 2 333444444445555556778
Q ss_pred eeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcc
Q 010112 425 TFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVP 504 (518)
Q Consensus 425 ~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 504 (518)
.+.+..|.+++++|+.+..+ ....+.++.+++...+++.. +|+..+++..+..++..++.++.+
T Consensus 192 ~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---------------~Wr~~~~~~~~~~~~~~~~~~l~~ 255 (521)
T KOG0255|consen 192 GFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---------------DWRWLFWIISIPSGLFLLLWFLPP 255 (521)
T ss_pred hHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---------------hHHHHHHHHHHHHHHHHHHHHccC
Confidence 88999999999999999999 88888999999999999983 899999988888888777654555
Q ss_pred cC
Q 010112 505 ES 506 (518)
Q Consensus 505 ~~ 506 (518)
|.
T Consensus 256 Es 257 (521)
T KOG0255|consen 256 ES 257 (521)
T ss_pred cC
Confidence 54
No 239
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=98.72 E-value=6.3e-05 Score=73.40 Aligned_cols=123 Identities=8% Similarity=-0.043 Sum_probs=88.9
Q ss_pred CchhhHHHHHHHHHHHHhh-hhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhc--cCCchhh-----------------
Q 010112 66 PPNVSAAVNGVALCGTLAG-QLFFGWLGDKLGRKKVYGITLILMVISSIASGLS--FGKSAKG----------------- 125 (518)
Q Consensus 66 s~~~~g~~~s~~~lg~~i~-~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~--~~~~~~~----------------- 125 (518)
+.+.+.++-+...+..++. .++.+++++|++|++++-.....+....+++++. ++.+..+
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~ 120 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFM 120 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhH
Confidence 3467888888888877777 8999999999999999877766666666655543 1110000
Q ss_pred ------HHHHHHHHHHHhhhccccccc-hhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010112 126 ------VIATLCFFRFWLGFGIGGDYP-LSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSS 188 (518)
Q Consensus 126 ------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~ 188 (518)
..|...+.-+..-+-...... ....+++|.++.+|-.|..+++..+.++|.++++.+..++.+
T Consensus 121 ~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 121 GFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012333333444443444444 778899999999999999999999999999999999888874
No 240
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.70 E-value=6.3e-06 Score=77.83 Aligned_cols=108 Identities=13% Similarity=0.009 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhh
Q 010112 70 SAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSA 149 (518)
Q Consensus 70 ~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (518)
.+.+.-+-.+...+..+...++.+|+..+.-+.....++.++.++.+++++ .+.=+++-++.+++.|.......
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~------v~~~l~Gv~las~ssg~GE~tfL 134 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPS------VWVRLLGVVLASLSSGLGEVTFL 134 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccc------hhHHHHHHHHHhhhhhhhHHHHH
Confidence 344555666677777788888999998766677777888899999999988 78888899999999998888877
Q ss_pred HHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010112 150 TIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSS 188 (518)
Q Consensus 150 ~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~ 188 (518)
.+.. .+++ ...+-+..+.+.++++|+..-..+..
T Consensus 135 ~lt~-~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~ 168 (402)
T PF02487_consen 135 SLTH-FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT 168 (402)
T ss_pred HHHH-hcCc----cccccccCCcChhhHHHHHHHHHHHH
Confidence 7754 5553 35677788888888888887766664
No 241
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.70 E-value=8.3e-08 Score=93.76 Aligned_cols=136 Identities=12% Similarity=0.055 Sum_probs=109.3
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
.......|.+++.+.++++.||+|-|+++..+.++.+++.++..+.... ..+ .+++.=++.+.......|....
T Consensus 78 i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~-----~~~-~~~~~R~lqGl~~g~~~pa~~~ 151 (466)
T KOG2532|consen 78 IFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASI-----GFY-LLLVLRFLQGLGQGVLFPAIGS 151 (466)
T ss_pred HHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHh-----cch-hhHHHHHHhHHHHhHHHhhhhc
Confidence 5555667888899999999999999999999999999999888876521 112 2233333344444445677888
Q ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 428 VPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
+..+-.|+++|++..++.....++|.+++-++.|.+.+ ...||+.+|++.+++.++..++.+
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~------------s~~GW~sifY~~g~~g~i~~~~w~ 213 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE------------SSLGWPSIFYVFGIVGLIWFILWF 213 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc------------cCCCCchHHHHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999999984 237999999999999888877766
No 242
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.67 E-value=8.9e-07 Score=80.53 Aligned_cols=155 Identities=16% Similarity=0.211 Sum_probs=123.7
Q ss_pred hHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhc-chhhHHHHHHHHHHHHHHHhhh
Q 010112 39 LFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKL-GRKKVYGITLILMVISSIASGL 117 (518)
Q Consensus 39 ~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~ 117 (518)
.++.-.-+|.+..|- ++|..+.|++.+...+.....++....+++|. .+|+..+....++.++...+.+
T Consensus 224 ~Y~~~~WLP~ili~~----------G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~ 293 (395)
T COG2807 224 YYIVIGWLPAILIDR----------GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLL 293 (395)
T ss_pred HHHHHHHHHHHHHHc----------CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHH
Confidence 344456678887777 99999999999999999999999999999975 4677778888888888888878
Q ss_pred ccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhccc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCC
Q 010112 118 SFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANK-KTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKA 196 (518)
Q Consensus 118 ~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~-~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~ 196 (518)
.+. ...+..-++.|+|.|..++.+..++.+..+. ++-++..+..|....+=...||.+.+++.|..++
T Consensus 294 ~P~-------~~~~lw~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gs---- 362 (395)
T COG2807 294 APG-------QLPILWALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGS---- 362 (395)
T ss_pred hhh-------hHHHHHHHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCC----
Confidence 877 2233335999999999999999999988865 4456667777777777778899999999877665
Q ss_pred CCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH
Q 010112 197 PPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW 232 (518)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 232 (518)
|+...+..+...++..+.
T Consensus 363 ------------------w~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 363 ------------------WSAPLVLLALATLLMLIF 380 (395)
T ss_pred ------------------hHHHHHHHHHHHHHHHHH
Confidence 998888776666655444
No 243
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.66 E-value=1.5e-07 Score=66.94 Aligned_cols=76 Identities=18% Similarity=0.194 Sum_probs=72.8
Q ss_pred hhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHH
Q 010112 35 DAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIA 114 (518)
Q Consensus 35 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~ 114 (518)
.+..|..+.|++|.+++|. ++|.++.|++.+..++||.+|++...++.++..+++.+..+++...+..+.
T Consensus 4 mGigRFayTplLP~M~~~~----------~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 73 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQADG----------GLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAA 73 (85)
T ss_pred hhhHHHHHHhHhHHHHHhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 5788999999999999999 999999999999999999999999999999999999999999999999999
Q ss_pred hhhccC
Q 010112 115 SGLSFG 120 (518)
Q Consensus 115 ~~~~~~ 120 (518)
+++.++
T Consensus 74 ma~~~~ 79 (85)
T PF06779_consen 74 MALTHS 79 (85)
T ss_pred HHHHhc
Confidence 999988
No 244
>PRK11462 putative transporter; Provisional
Probab=98.66 E-value=2e-06 Score=85.30 Aligned_cols=120 Identities=20% Similarity=0.150 Sum_probs=85.4
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccch
Q 010112 68 NVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPL 147 (518)
Q Consensus 68 ~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 147 (518)
...+.+.+.+.++..++.+++++++||+|+|+++..+..+.++..++..+.++. +...+++.-++.|++.+...+.
T Consensus 263 ~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~g~~~~~~~~l 338 (460)
T PRK11462 263 EVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQ----ASITMFVFIFVIGVLHQLVTPI 338 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchh----HHHHHHHHHHHHHHHHHHHHHH
Confidence 345667788888999999999999999999998776655554444444333331 0223444556678877777777
Q ss_pred hhHHhhhhcc-------cccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 148 SATIMSEYAN-------KKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 148 ~~~~i~e~~~-------~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
..+++.|..+ .++.|...+.......+|..+++.+++.+....+
T Consensus 339 ~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 339 QWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 7778887776 3333555677778889999999999999887655
No 245
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.63 E-value=1.3e-07 Score=88.37 Aligned_cols=164 Identities=14% Similarity=0.063 Sum_probs=104.2
Q ss_pred HHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccc
Q 010112 344 IARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNA 423 (518)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (518)
..........++.++|.++.|++.||+|||++.....+++.++.++.+.... -........++..+=...+.+-.+=.|
T Consensus 85 i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~-~~~~~~~m~~L~~~R~~LGiGIGGDYP 163 (538)
T KOG0252|consen 85 VLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVG-TTSPLGVMMTLCFFRFLLGIGIGGDYP 163 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCC-CCCCcchhhHHHHHHHHhhccccCCCc
Confidence 3444777788899999999999999999999999999999999886665542 111213344445554555566666789
Q ss_pred eeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCC-CCCCC-cccchhHHHHHHHHHHHHHHHHh
Q 010112 424 TTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRD-AGYPA-GIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 424 ~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~-~~~~~-~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
+.-++++|....+.||+-.+...+...+|...|.++.-.+.......-.+ .+++. ..=|+..+.+.++..++....-+
T Consensus 164 lSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl 243 (538)
T KOG0252|consen 164 LSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL 243 (538)
T ss_pred chHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999887776666655555554444333322221111 11111 12355555444444444433333
Q ss_pred hcccCCC
Q 010112 502 CVPESKG 508 (518)
Q Consensus 502 ~~~~~~~ 508 (518)
.+||+++
T Consensus 244 ~M~Et~~ 250 (538)
T KOG0252|consen 244 KMPETAR 250 (538)
T ss_pred cCCcchh
Confidence 6787754
No 246
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.62 E-value=3.4e-07 Score=81.00 Aligned_cols=144 Identities=13% Similarity=0.037 Sum_probs=97.6
Q ss_pred HHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHH
Q 010112 307 LLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVF 386 (518)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 386 (518)
......|.+..|.|.+-++.+++.++.+. ......++..+ .+..|.+.|++|.+..+.++.+...++
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~------------l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~G 79 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLKSRLGYSQSQLNT------------LSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVG 79 (250)
T ss_pred HhcCcccchhhhhHHHHHHhCCCHHHHHH------------HHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 34456678889999998888888776443 55555566655 478899999999999999999999999
Q ss_pred HHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 387 MFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
..++...........+ .+.+.++....+...............+.+| ++||++.|+.-....+++.+-..+...+.+
T Consensus 80 Y~~~~l~~~~~i~~~~-~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GLSaai~t~i~~~~f~ 156 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLP-VWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGLSAAIFTQIYSAFFG 156 (250)
T ss_pred HHHHHHHHhCccCccc-hHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHhHHHHHHHHHHHHcC
Confidence 9888766532221112 2222222222222222122333334456777 469999999999999999988888877763
No 247
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.53 E-value=2.4e-06 Score=69.67 Aligned_cols=116 Identities=16% Similarity=0.117 Sum_probs=97.3
Q ss_pred CCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccc
Q 010112 65 LPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGD 144 (518)
Q Consensus 65 ~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 144 (518)
+++..--.-.++......+++++.+.+.+++|.|+.++++.++..+-.+... -++ .+.++.+-.+.|++.+..
T Consensus 34 i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~-~~~------~~~l~~~s~l~G~~~a~l 106 (156)
T PF05978_consen 34 ISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFF-YPN------SYTLYPASALLGFGAALL 106 (156)
T ss_pred ccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hhh------HHHHHHHHHHHhhhhHHh
Confidence 4444444455666677788888899999999999999999999987666553 344 488999999999999999
Q ss_pred cchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 145 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
+.....++.+..++++|++..++.......+.++|.++...+.
T Consensus 107 W~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 107 WTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred hHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988877764
No 248
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.49 E-value=9.2e-06 Score=74.12 Aligned_cols=149 Identities=13% Similarity=0.082 Sum_probs=89.1
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhh-----hc
Q 010112 21 HFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGD-----KL 95 (518)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~d-----r~ 95 (518)
...-+..+.+.+.+++.-.+..+ .+|.+-+.- +.|.++.+...-++ .-+ ---+.+.++.| |+
T Consensus 29 d~~~illLl~LYllQGiP~GL~~-~iP~lL~ak----------~vSyt~~a~fS~ay-~P~-sLKllWaPiVDs~y~k~~ 95 (510)
T KOG3574|consen 29 DRSSILLLLFLYLLQGIPLGLIG-AIPLLLQAK----------GVSYTSQAIFSFAY-WPF-SLKLLWAPIVDSVYSKRF 95 (510)
T ss_pred hhhhHHHHHHHHHHcCCchhHhh-hhHHHhcCC----------Ccchhhhhhhhhhh-hHH-HHHHHHHhhhHHHHHHhh
Confidence 34455566667888888777777 788876654 78877776543322 111 33567888888 99
Q ss_pred chhhHH-HHHHHHHHHHHHHhhhccCCc-----hhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHH
Q 010112 96 GRKKVY-GITLILMVISSIASGLSFGKS-----AKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVF 169 (518)
Q Consensus 96 Grr~~~-~~~~~l~~i~~~~~~~~~~~~-----~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~ 169 (518)
||||.. +=+..+.+..+.+.+...+.. ...+...+....++.-+.++.--.+.-.+.-....+++-|-+.....
T Consensus 96 GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~ 175 (510)
T KOG3574|consen 96 GRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQS 175 (510)
T ss_pred ccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHH
Confidence 999873 223333333333333322111 00112233334455555566666777778888888898888887777
Q ss_pred HHHHHHHHHHHHH
Q 010112 170 AMQGFGILAGGIV 182 (518)
Q Consensus 170 ~~~~lG~~lg~~l 182 (518)
.+.+.|..++..+
T Consensus 176 Vg~~~GyfL~~~i 188 (510)
T KOG3574|consen 176 VGQTAGYFLGNVV 188 (510)
T ss_pred HHHhhhHHhhcce
Confidence 6666666665544
No 249
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.49 E-value=4.4e-06 Score=72.39 Aligned_cols=86 Identities=17% Similarity=0.091 Sum_probs=66.0
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+....++|.+.-..+-...+...+.|-++||-|||+.-+.-++...++++ .-.++. +-.++++|.+-|++.+.
T Consensus 68 gFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpq------YkVLmVGR~LGGiaTsL 140 (454)
T KOG4332|consen 68 GFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQ------YKVLMVGRVLGGIATSL 140 (454)
T ss_pred CccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCc------eEEEeehhhhhhHHHHH
Confidence 77788888888887778888888999999999999986655555544443 334555 57899999999999888
Q ss_pred ccchhhHH-hhhhc
Q 010112 144 DYPLSATI-MSEYA 156 (518)
Q Consensus 144 ~~~~~~~~-i~e~~ 156 (518)
.+.+.-++ +.|..
T Consensus 141 LFSaFEsWliaEHn 154 (454)
T KOG4332|consen 141 LFSAFESWLIAEHN 154 (454)
T ss_pred HHHHHHHHHHHHhh
Confidence 87776665 56655
No 250
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.45 E-value=1.8e-05 Score=74.03 Aligned_cols=154 Identities=18% Similarity=0.137 Sum_probs=125.4
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhh-hcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGD-KLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIG 142 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~d-r~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (518)
+++..+...+++....|..++-...|++.. |.++|+.-.+++.+..++..+..++...+ +-+.+...-++.|++.|
T Consensus 240 gmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~---~~~~~~~~~~l~G~g~G 316 (403)
T PF03209_consen 240 GMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLG---SPWLFRPGVFLLGLGNG 316 (403)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcc---cchHHHHHHHHHHHhhh
Confidence 999999999999999999999999999888 67888888888888777766654432211 15889999999999999
Q ss_pred cccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
.......+.+.|...+++.|..+|.+...+.++..++..+++.+.+........ ....+|-..|.+.
T Consensus 317 ~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~-------------~~~~aY~~VF~lE 383 (403)
T PF03209_consen 317 LFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGN-------------SPALAYGVVFALE 383 (403)
T ss_pred HHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-------------CcchHHHHHHHHH
Confidence 999999999999999999999999999999999999999999998765431110 1345677888888
Q ss_pred hHHHHHHHHHH
Q 010112 223 ALPAALTYYWR 233 (518)
Q Consensus 223 ~~~~~~~~~~~ 233 (518)
++..++++++.
T Consensus 384 a~ll~~a~~ll 394 (403)
T PF03209_consen 384 AVLLLAALVLL 394 (403)
T ss_pred HHHHHHHHHHH
Confidence 77766665543
No 251
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.44 E-value=1.8e-06 Score=87.22 Aligned_cols=139 Identities=19% Similarity=0.184 Sum_probs=103.6
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
......++..++.++.|+++|++|||+.+..+.++..++.++..... +...+.+.=.+.+ .+..+...+...
T Consensus 94 ~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~-------~~~~l~~GR~l~G-~g~G~~~~~~pi 165 (513)
T KOG0254|consen 94 LTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP-------SWYQLIVGRILTG-LGVGGASVLAPV 165 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHhc-cchhhhhhcchh
Confidence 66667778888999999999999999999999999999999988776 2233333333333 333333456668
Q ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccC
Q 010112 428 VPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPES 506 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (518)
+.+|+.|++.||...+.......+|..++ .+.+...+. ...+|+..+.+..+.+++..+..+++||+
T Consensus 166 y~sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~-----------~~~~Wr~~~~~~~i~~~~~~~~~~~~pes 232 (513)
T KOG0254|consen 166 YISEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSK-----------VYAGWRIPLGLALIPAVILALGMLFLPES 232 (513)
T ss_pred hHhhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhcc-----------CCccHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999998888888777 444554420 01489988888888888877775677765
No 252
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.39 E-value=7.7e-06 Score=75.73 Aligned_cols=149 Identities=11% Similarity=0.070 Sum_probs=118.6
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHhhhhhh-hcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHH
Q 010112 24 AIVIAGMGFFTDAYDLFCISLVTKLLGRI-YYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYG 102 (518)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~ 102 (518)
-+....++.|++.-.+...+..++...+| . +.+..+.....+.+..+..+|.+.+-++..|+...|.+.
T Consensus 237 ~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~----------g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~La 306 (422)
T COG0738 237 HLRLGVLAIFLYVGAEVAIGSFLVSYLEELL----------GLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLA 306 (422)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHhcC----------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 33444555666555556666666666555 4 889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHH
Q 010112 103 ITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIV 182 (518)
Q Consensus 103 ~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l 182 (518)
+..++..+.++..+++++ ..-+.+-++.|+..+..+|...+...+..| +.....|..-....+|+++-|.+
T Consensus 307 f~a~~~ill~~~~~l~~g-------~v~~~~l~~ig~F~simfPTIfslal~~l~--~~ts~~s~~l~maivGGAiiP~l 377 (422)
T COG0738 307 FYALIAILLLLAVALIGG-------VVALYALFLIGLFNSIMFPTIFSLALKNLG--EHTSVGSGLLVMAIVGGAIIPPL 377 (422)
T ss_pred HHHHHHHHHHHHHHHhcC-------hHHHHHHHHHHHHhHHHHHHHHHHHHhccC--ccccccceeeeeheecchHHHHH
Confidence 999999888999999988 344456778899999999999999999999 33444444445566799999999
Q ss_pred HHHHHhhcc
Q 010112 183 ALIVSSAFD 191 (518)
Q Consensus 183 ~~~l~~~~~ 191 (518)
.+++.+..+
T Consensus 378 ~G~i~d~~g 386 (422)
T COG0738 378 QGVIADMFG 386 (422)
T ss_pred HHHHHHhhh
Confidence 999987666
No 253
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.31 E-value=6.5e-06 Score=80.89 Aligned_cols=144 Identities=15% Similarity=0.089 Sum_probs=101.5
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
....+.++.+++.+.++.+.||++-.+.+....+..++..++-.... +...++++-.+.+ ....+..|....
T Consensus 86 ~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~-------s~~~~ialr~llG-l~es~~wP~~~~ 157 (495)
T KOG2533|consen 86 LDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH-------SFPGLIALRFLLG-LFESGGWPGVVA 157 (495)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh-------hhHHHHHHHHHHH-HHhcccchHHHH
Confidence 44555566677778899999999955555544444333333322222 2334444444444 444455677878
Q ss_pred ccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccC
Q 010112 428 VPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPES 506 (518)
Q Consensus 428 ~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~ 506 (518)
++..-+.+++|+..+|+.++...+|+++|+.+...+.+..+.. ...||++.|++-++++++..+..+ ++|+.
T Consensus 158 ~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~-------~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 158 ILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSG-------GLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred HHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCC-------CcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 9999999999999999999999999999999998876533321 356999999999999998887776 66643
No 254
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=98.30 E-value=9.3e-06 Score=73.20 Aligned_cols=151 Identities=14% Similarity=0.081 Sum_probs=109.0
Q ss_pred CCCchhhH-HHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccc
Q 010112 64 TLPPNVSA-AVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIG 142 (518)
Q Consensus 64 ~~s~~~~g-~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (518)
+++..+.. -+.-...-.+.+.-.+.=.+.|..--|++++.-.+.......+..+.++ .+.+=+.-+.-|...+
T Consensus 37 NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~s------V~~mQvlE~FyG~~tA 110 (433)
T KOG3810|consen 37 NLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPS------VKAMQVLEFFYGPATA 110 (433)
T ss_pred CccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCC------chheeeehhhcChHHH
Confidence 55554443 2333444455666666678999999999988887777778888888888 6888888899998766
Q ss_pred cccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
. ..+-++++.+..+++++.++.+...+..-.|-..|..++-.+.... ..++...-.+.
T Consensus 111 a-EIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~---------------------~~sy~~LN~IS 168 (433)
T KOG3810|consen 111 A-EIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLE---------------------TLSYTTLNYIS 168 (433)
T ss_pred H-HHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhc---------------------ccchhhhchhh
Confidence 4 5778999999999999999999999988888888888887776322 22355555554
Q ss_pred hHHHHHHHHHHhcCCCCcch
Q 010112 223 ALPAALTYYWRMRMPETARY 242 (518)
Q Consensus 223 ~~~~~~~~~~~~~~~esp~~ 242 (518)
.....+..++..++|..++.
T Consensus 169 L~~~~ia~~~A~fLP~v~rS 188 (433)
T KOG3810|consen 169 LAEVTIAVLLALFLPRVKRS 188 (433)
T ss_pred HHHHHHHHHHHhhCCCCchh
Confidence 44444555556677776643
No 255
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.30 E-value=1.2e-06 Score=83.60 Aligned_cols=140 Identities=14% Similarity=0.056 Sum_probs=123.1
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+-.+...|.....-..|-++.-++.+++..|+|+-+++..++.+.++=.+..++..| .|+.+...+++|+..+.
T Consensus 402 ~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n------~W~vLPieilqgit~al 475 (618)
T KOG3762|consen 402 GGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQN------PWMVLPIEILQGITHAL 475 (618)
T ss_pred CCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcC------chheeeHHHHHHHHHHH
Confidence 666777788888888888999999999999999999999999999999999999999 79999999999999999
Q ss_pred ccchhhHHhhhhcccccchhHHHHHHHH-HHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhh
Q 010112 144 DYPLSATIMSEYANKKTRGAFIAAVFAM-QGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVG 222 (518)
Q Consensus 144 ~~~~~~~~i~e~~~~~~rg~~~~~~~~~-~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~ 222 (518)
.+....+|++...||+-|..+.++.+.. .++|--+|.++++.+...++ =|..|...
T Consensus 476 iWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg-----------------------~~ttf~~~ 532 (618)
T KOG3762|consen 476 IWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFG-----------------------ARTTFRIF 532 (618)
T ss_pred HHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeeh-----------------------hHHHHHHH
Confidence 9999999999999999999999987654 47888899999999976555 68888887
Q ss_pred hHHHHHHHHH
Q 010112 223 ALPAALTYYW 232 (518)
Q Consensus 223 ~~~~~~~~~~ 232 (518)
++.+++.++.
T Consensus 533 giAcl~~l~~ 542 (618)
T KOG3762|consen 533 GIACLVTLAL 542 (618)
T ss_pred HHHHHHHHHH
Confidence 7777665444
No 256
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.30 E-value=7.3e-08 Score=95.96 Aligned_cols=146 Identities=14% Similarity=0.103 Sum_probs=104.7
Q ss_pred HHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCcccee
Q 010112 346 RAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATT 425 (518)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (518)
........++.++|.+++|++.||+|||+.+..+..+..++.++..+.... .+...+. +.-+..+++..+..+..
T Consensus 49 ~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~-~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 49 SLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSY----NNFWMLL-IGRFLIGFGIGGAYVVS 123 (451)
T ss_pred HHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccc----ccccccc-ccccccccccccccccc
Confidence 336677778999999999999999999999999999988888877766521 1122222 22233333444456678
Q ss_pred eeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhccc
Q 010112 426 FVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPE 505 (518)
Q Consensus 426 ~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 505 (518)
..++.|..|+++|+...++.+....+|..++..+.....+. . +..+|+..+.+.++..++..+...++||
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~-~---------~~~~Wr~~~~~~~~~~l~~~~~~~~~pE 193 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYY-S---------DNWGWRILLIFGAIPSLLVLLLRFFLPE 193 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccc-c---------cccccccccccccccccccccccccccc
Confidence 88999999999999999998888888887777765444211 1 2346888888887777776666667776
Q ss_pred C
Q 010112 506 S 506 (518)
Q Consensus 506 ~ 506 (518)
+
T Consensus 194 S 194 (451)
T PF00083_consen 194 S 194 (451)
T ss_pred c
Confidence 5
No 257
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.24 E-value=0.00096 Score=65.17 Aligned_cols=55 Identities=11% Similarity=0.040 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 010112 126 VIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALI 185 (518)
Q Consensus 126 ~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~ 185 (518)
.++..++.-++.|++.+........+.+ .+|++ .++.+..+.+++++++..+--.
T Consensus 105 ~f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~----~~~a~~~G~g~aGv~~s~~~ii 159 (437)
T TIGR00939 105 FFVTTMASVVIINSGMALLQGSLFGLAG-VFPST----YSSAVMSGQGLAGVLTSLAMIL 159 (437)
T ss_pred HHHHHHHHHHHHHhhhhhhcccchhhcc-cCCHH----HHHHHHhcchhHHHHHHHHHHH
Confidence 3777788888999999988888888777 55533 4555666666666666655433
No 258
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=98.19 E-value=0.00056 Score=64.29 Aligned_cols=174 Identities=11% Similarity=0.083 Sum_probs=82.5
Q ss_pred hhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhh
Q 010112 37 YDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASG 116 (518)
Q Consensus 37 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~ 116 (518)
.....+..+.+...+++.. + +.+............+...+....-..+.-|. |+++.....+...+....+.
T Consensus 32 lpWN~fiTa~~y~~~~~~~------~-~~~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~-~~~~~~~l~~~~il~i~~l~ 103 (406)
T KOG1479|consen 32 LPWNMFITASDYYYYRFPG------Y-HNSKNFTSSYTLAAQIPLLLFNLLNAFLNTRL-RTRVGYLLSLIAILFIVTLD 103 (406)
T ss_pred cchHhhhccHHHHHhhcCC------C-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Confidence 3445555666666666511 0 11334444444444555555555555566662 22221111111111122222
Q ss_pred hcc---CCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 010112 117 LSF---GKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHH 193 (518)
Q Consensus 117 ~~~---~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~ 193 (518)
++. .......+...++.-.+.+.+.|..........++. |++.- .-+.++.++++.+...+.-.......
T Consensus 104 ~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~-P~~yt----qavm~G~a~aG~l~Sl~~i~tka~~~-- 176 (406)
T KOG1479|consen 104 LALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLF-PSEYT----QAVMSGQALAGTLTSLLRILTKAAFS-- 176 (406)
T ss_pred HHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcC-CHHHH----HHHHhcchhHhHHHHHHHHHHHHhcC--
Confidence 221 111223366777788888888888777777766654 43332 22334444555554444333222222
Q ss_pred CCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHhcCCCCcc
Q 010112 194 FKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRMRMPETAR 241 (518)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~~~~esp~ 241 (518)
+.+.+=..-|.+..++.+++++....+|..|-
T Consensus 177 ----------------~~~~sA~~yF~~s~~~~llC~i~y~~l~~lpf 208 (406)
T KOG1479|consen 177 ----------------DSRTSALIYFITSTVILLLCFVLYLVLPKLPF 208 (406)
T ss_pred ----------------CCCceeehhHHHHHHHHHHHHHHHHHhhcchH
Confidence 12222334455555555666666556676663
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.17 E-value=1.2e-05 Score=56.90 Aligned_cols=67 Identities=21% Similarity=0.332 Sum_probs=53.8
Q ss_pred HhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHH
Q 010112 32 FFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILM 108 (518)
Q Consensus 32 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~ 108 (518)
++......+..-|..|...++. |++..++|.+.++..+...++++++|.++||+++++.++....++
T Consensus 9 yf~~f~~~g~~~Pfl~~~~~~~----------Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 9 YFFYFAALGCLYPFLPLYLKQL----------GLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHhhhhHhhhhc----------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4444445555566666666666 999999999999999999999999999999999998877665543
No 260
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.16 E-value=7.7e-05 Score=71.19 Aligned_cols=45 Identities=11% Similarity=0.031 Sum_probs=36.0
Q ss_pred ceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcC
Q 010112 423 ATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSK 467 (518)
Q Consensus 423 ~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 467 (518)
....+.-+.+.+|..-|+.|.+.|+..|+|+---..+.-++.|..
T Consensus 424 Vai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 424 VAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhc
Confidence 344466678889999999999999999999987777766666654
No 261
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.11 E-value=2.6e-05 Score=75.28 Aligned_cols=154 Identities=9% Similarity=-0.035 Sum_probs=98.4
Q ss_pred HHHHHHhhcccchhhhhhhhhhccC-hhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGR-FAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTF 426 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~-r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (518)
......++..+++++.++...|.++ |+.++.+.+++.++.++...... . . +...++.+..=+..+.+.+.....-
T Consensus 76 viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~-~--~-~~~~y~mL~~R~l~Gvg~~n~a~lR 151 (488)
T KOG2325|consen 76 VIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAY-V--P-NGVKYLMLVARILTGVGVGNFAVLR 151 (488)
T ss_pred HHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHh-c--c-cchHHHHHHHHHHcCcCcccHHHHH
Confidence 5555788888999999999999886 88889999999998888743331 1 1 1122223322222222333445666
Q ss_pred eccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCc-CCCCCCCcccchhHHHHHHHHHHHHHHHHh-hcc
Q 010112 427 VVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTK-RDAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVP 504 (518)
Q Consensus 427 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~ 504 (518)
.|+++..-++.|.++++..+....+|.++||.+...+.-...+.- ..++ ..-.-|..+-++++++.++..++.. +++
T Consensus 152 ~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~-~~~n~YTap~w~m~i~~i~~~v~i~~~f~ 230 (488)
T KOG2325|consen 152 AYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPG-LIFNMYTAPAWLMAILWIIYIVIILFFFK 230 (488)
T ss_pred HHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCc-ceEEecchHHHHHHHHHHHHHHHHHhhee
Confidence 788887777778888888888777888888887766543221110 0111 1112355677888888888877766 555
Q ss_pred cC
Q 010112 505 ES 506 (518)
Q Consensus 505 ~~ 506 (518)
|.
T Consensus 231 E~ 232 (488)
T KOG2325|consen 231 EV 232 (488)
T ss_pred ec
Confidence 54
No 262
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.04 E-value=0.012 Score=59.35 Aligned_cols=158 Identities=17% Similarity=0.139 Sum_probs=118.2
Q ss_pred HHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhh-cchhhHHHHHHHHHHHHHHHhhhccC
Q 010112 42 ISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDK-LGRKKVYGITLILMVISSIASGLSFG 120 (518)
Q Consensus 42 ~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr-~Grr~~~~~~~~l~~i~~~~~~~~~~ 120 (518)
....+..+.+++ +.+...+.-..+.+.-......+.+++++|- +||-+++.++.++..++..+..++..
T Consensus 57 ~~nlv~ylt~~~----------~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~ 126 (571)
T KOG1237|consen 57 VSNLVTYLTLEL----------HASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAM 126 (571)
T ss_pred hhHHHHHHHHHh----------ccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467777888888 8888888888888888888999999999996 58989999998888877554433110
Q ss_pred -------------Cc------hhhHHHHHHHHHHHhhhccccccchhhHHhhhhcc---cc---cchhHHHHHHHHHHHH
Q 010112 121 -------------KS------AKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYAN---KK---TRGAFIAAVFAMQGFG 175 (518)
Q Consensus 121 -------------~~------~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~---~~---~rg~~~~~~~~~~~lG 175 (518)
.. .......+..+.-+..+|.|+.-|...++-+|-++ ++ .+...+.++....+.|
T Consensus 127 ~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g 206 (571)
T KOG1237|consen 127 IPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGG 206 (571)
T ss_pred hhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHH
Confidence 00 11124567778888889999999999999999998 32 2236778888888888
Q ss_pred HHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHH
Q 010112 176 ILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYW 232 (518)
Q Consensus 176 ~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~ 232 (518)
..++..+-.+.- .+.+|.+.|.+..+..++++++
T Consensus 207 ~l~a~t~~vyiq-----------------------~~~~w~lgf~i~~~~~~lai~i 240 (571)
T KOG1237|consen 207 ALLAQTVLVYIQ-----------------------DNVGWKLGFGIPTVLNALAILI 240 (571)
T ss_pred HHHHHHHHHhhh-----------------------hcccceeeccHHHHHHHHHHHH
Confidence 888877766663 3456999998877766655444
No 263
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.89 E-value=0.00017 Score=73.91 Aligned_cols=138 Identities=12% Similarity=0.009 Sum_probs=90.5
Q ss_pred cchhhhhhhhhh-ccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchh
Q 010112 358 PGYWFTVAFIDY-MGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR 436 (518)
Q Consensus 358 ~~~~~~g~l~dr-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 436 (518)
+..++++++.|+ +||++.+..+.++..++..++.+................+.+.+...+..+.-|...+...|.++++
T Consensus 38 l~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 38 LTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEER 117 (654)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCcc
Confidence 355677888987 6999999999999888887776543110000111111222222333344445566667777777643
Q ss_pred ---hhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 437 ---LRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 437 ---~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
.+.....+.....++|+++++.+.+++.+..+. +.+..+|...|.+.+++++++.+...
T Consensus 118 ~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~------fg~~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 118 QLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGC------FGCQDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc------cccCcchHHHHHHHHHHHHHHHHHHH
Confidence 467788888899999999999999998743210 01234688889988888888877665
No 264
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.84 E-value=0.00035 Score=68.35 Aligned_cols=120 Identities=10% Similarity=0.089 Sum_probs=107.5
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhh-hhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFG-WLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIG 142 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G-~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g 142 (518)
++++.+.+...+.......+++++.. .+...+|-|+++..|++.-.+...+.+++++ .|++....++.++ ..
T Consensus 273 ~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~------~w~~~~~~v~~~~-~~ 345 (463)
T KOG2816|consen 273 GWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATE------TWMMFAAGVVVAL-AG 345 (463)
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhcc------chhhhHHHHHHHh-hc
Confidence 89999999999999999999999888 7788899999999999999999999999999 5888888888877 45
Q ss_pred cccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 010112 143 GDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAF 190 (518)
Q Consensus 143 ~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~ 190 (518)
...|...+.++.+..++++|++.++......+...++|.+-+.+...+
T Consensus 346 ~~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 346 IVFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALT 393 (463)
T ss_pred chhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 668999999999999999999999999999999999998877775443
No 265
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.78 E-value=0.00034 Score=66.04 Aligned_cols=121 Identities=14% Similarity=0.023 Sum_probs=77.9
Q ss_pred HHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceee
Q 010112 347 AQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTF 426 (518)
Q Consensus 347 ~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (518)
....++.+..++..+.+.|+.||+|-|.....+..+.+++..+=.+......++.....+.................+..
T Consensus 83 wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPs 162 (480)
T KOG2563|consen 83 WLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPS 162 (480)
T ss_pred HHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhcccc
Confidence 35666666777778889999999999999999999988888775554421111111111111111111111111111222
Q ss_pred eccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcC
Q 010112 427 VVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSK 467 (518)
Q Consensus 427 ~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 467 (518)
-+..--+|+++|+++..+..+.+.+|..++..+.+.+....
T Consensus 163 kiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 163 KIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 23344589999999999999999999999999998887543
No 266
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.77 E-value=0.0012 Score=61.08 Aligned_cols=157 Identities=12% Similarity=-0.004 Sum_probs=88.6
Q ss_pred HHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcccccc
Q 010112 319 QKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWT 398 (518)
Q Consensus 319 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (518)
.-.++++.|++..+... .+........+...+.|.+.||+|||+.-+...++..++.+.--...
T Consensus 57 ~Y~LY~~yg~~~~qIa~------------Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k~~~~---- 120 (354)
T PF05631_consen 57 LYALYESYGFSEHQIAI------------LFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTKHSSN---- 120 (354)
T ss_pred hHHHHHHcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhccc----
Confidence 33445667776665322 55555566666777889999999999998887777777665432221
Q ss_pred CCCchhHHHHHHHHHHHHHhcCccceeee-ccc----cccchhhhhhHHHHHHHH-HHHHHHHHHhhhHhhhhcCCCCcC
Q 010112 399 LKPNRIGFVIMYSLTFFFANFGPNATTFV-VPA----EIFPARLRSTCHGISAAA-GKAGAIVGAFGFLYAAQSKDPTKR 472 (518)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~p~~~~~~~~g~~~~~-~~~g~~~~~~~~g~l~~~~~~~~~ 472 (518)
...+.+.=+.++.......+..-+ ++. .-+|++..+...+...+. +.+-++.+..+.-.+.+..+
T Consensus 121 -----~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~---- 191 (354)
T PF05631_consen 121 -----YPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFG---- 191 (354)
T ss_pred -----cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhC----
Confidence 222222222222222211121111 122 235666666666655533 33455555566656654332
Q ss_pred CCCCCCcccchhHHHHHHHHHHHHHHHHh-hcccCC
Q 010112 473 DAGYPAGIGVKNSLIMLGVVNFVGMICTL-CVPESK 507 (518)
Q Consensus 473 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~ 507 (518)
.|...+|.....+.+++.++.. .-+|..
T Consensus 192 -------~g~vaPF~~a~~~l~~~~~~I~~~W~ENy 220 (354)
T PF05631_consen 192 -------FGPVAPFDAAIVLLAVAAVLILKTWPENY 220 (354)
T ss_pred -------CCCcchHHHHHHHHHHHHHHHHhcccccC
Confidence 2457789888888888877766 344543
No 267
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=97.70 E-value=0.064 Score=53.07 Aligned_cols=123 Identities=13% Similarity=0.056 Sum_probs=79.4
Q ss_pred CchhhHHHHHHHHH-HHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhc--cC---Cchhh--------------
Q 010112 66 PPNVSAAVNGVALC-GTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLS--FG---KSAKG-------------- 125 (518)
Q Consensus 66 s~~~~g~~~s~~~l-g~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~--~~---~~~~~-------------- 125 (518)
.++.+..+=....+ ...+......++++|++|++++-+.+..+...-.++++. |+ .|...
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 45566666554444 445667789999999999999776665555544444432 11 11000
Q ss_pred ------HHHHHHHHHHHhhhccccccc-hhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010112 126 ------VIATLCFFRFWLGFGIGGDYP-LSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSS 188 (518)
Q Consensus 126 ------~~~~l~~~r~l~G~~~g~~~~-~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~ 188 (518)
..|.+.+.-++.-+-.....+ .-..+..|.++.+|-.|..+++..+.++|.++++.+...+.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012222222222332222223 457889999999999999999999999999999988888876
No 268
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.66 E-value=0.00039 Score=67.18 Aligned_cols=113 Identities=14% Similarity=0.149 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHhhhc--cCCc-hhhHHHHHHHHHHHhhhccccccchhhHHhhhhcccc---cchhHHHHHHHHH
Q 010112 99 KVYGITLILMVISSIASGLS--FGKS-AKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKK---TRGAFIAAVFAMQ 172 (518)
Q Consensus 99 ~~~~~~~~l~~i~~~~~~~~--~~~~-~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~---~rg~~~~~~~~~~ 172 (518)
|+++++.++..+|.++..++ +... .....+.++++-.+.++|.|+.-|....+.+|.++++ +|.+...+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 67888899999999884443 2210 1111367889999999999999999999999999865 4667788899999
Q ss_pred HHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcchHHHHhhhHHHHHHHHHHh
Q 010112 173 GFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWRIVLMVGALPAALTYYWRM 234 (518)
Q Consensus 173 ~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr~~f~~~~~~~~~~~~~~~ 234 (518)
++|..++..+.+++.+ +++|.+.|.+.++..+++++...
T Consensus 82 n~G~~~~~~~~~~i~~-----------------------~~~~~~~f~i~~~~~~~~~~~f~ 120 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQ-----------------------NYGWFLGFGIPAIGMLLALIVFL 120 (372)
T ss_dssp HHHHHHHHHCCCHHHH-----------------------CS-HHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHhhcccchhhcc-----------------------ccchhhhhhHHHHHHHHHHHHHH
Confidence 9999999999888863 45699999998887777665543
No 269
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.37 E-value=0.0023 Score=56.17 Aligned_cols=116 Identities=10% Similarity=0.055 Sum_probs=57.1
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCc--hhHHHHHHHHHHHHHhcCcccee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPN--RIGFVIMYSLTFFFANFGPNATT 425 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 425 (518)
.......+..+|.+..|...+..=+||..+...+.+++.+.++.....+.....+ ......++.+..+.+..+..++.
T Consensus 146 ~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~Vi 225 (267)
T PF07672_consen 146 FQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVI 225 (267)
T ss_pred HHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 4444455555665666666655333443333322222222222211111111111 23344555556666667777777
Q ss_pred eeccccc--cchhhhhhHHHHHHHHHHHHHHHHHhhhHhh
Q 010112 426 FVVPAEI--FPARLRSTCHGISAAAGKAGAIVGAFGFLYA 463 (518)
Q Consensus 426 ~~~~~~~--~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l 463 (518)
.....|. ..|++-|...|+.-.++++.-.+.-.+...+
T Consensus 226 L~lPhEyK~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i 265 (267)
T PF07672_consen 226 LNLPHEYKGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVI 265 (267)
T ss_pred hcChhhhcCCCcceehhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666655 2355567777777777766665555554443
No 270
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=97.21 E-value=0.24 Score=48.06 Aligned_cols=124 Identities=12% Similarity=-0.013 Sum_probs=82.6
Q ss_pred CCchhhHHHHHHHHH-HHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccC-----Cchh----h--------H
Q 010112 65 LPPNVSAAVNGVALC-GTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFG-----KSAK----G--------V 126 (518)
Q Consensus 65 ~s~~~~g~~~s~~~l-g~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~-----~~~~----~--------~ 126 (518)
..++.+.++=+..-+ +..+..++.+++.+++.|++++-.-+..+....+++++.-- .|.. + .
T Consensus 58 ~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~ 137 (509)
T COG3202 58 QGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMF 137 (509)
T ss_pred CcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCcc
Confidence 445667777777777 77889999999999999999987777666666666654311 1000 0 0
Q ss_pred ---------HHHHHHHHHHhhhccccc-cchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010112 127 ---------IATLCFFRFWLGFGIGGD-YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSS 188 (518)
Q Consensus 127 ---------~~~l~~~r~l~G~~~g~~-~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~ 188 (518)
-|...+.-++.=+=.... .-.-.....|.+..+|-.|..++++.+.+++..++..+..++.+
T Consensus 138 l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 138 LKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred ceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 022222222222211122 22456678899999999999999999999999998888888864
No 271
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.12 E-value=0.0027 Score=62.45 Aligned_cols=164 Identities=11% Similarity=0.077 Sum_probs=115.3
Q ss_pred CCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCch-----hhHHHHHHHHHHH
Q 010112 62 PGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSA-----KGVIATLCFFRFW 136 (518)
Q Consensus 62 ~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~-----~~~~~~l~~~r~l 136 (518)
..|.++...|.+..+..++..++........-+..-|+++..+.++.++..+.....-...+ .+ .+..+.--++
T Consensus 249 gp~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d-~~f~lgd~~l 327 (433)
T PF03092_consen 249 GPHFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPD-QWFALGDTIL 327 (433)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCC-eEEEEEhHHH
Confidence 34689999999999999999999999999888889999998888888776665332211000 00 1222233455
Q ss_pred hhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCCCCCCCCCCCCCCCCCcch
Q 010112 137 LGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFDHHFKAPPYSVDPVGSTAPEADYVWR 216 (518)
Q Consensus 137 ~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~wr 216 (518)
..+..+..+-....+++|.+|+..-|...++..+..++|..++..++..+.+.++.+.. +-.+-.
T Consensus 328 ~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~---------------~f~~l~ 392 (433)
T PF03092_consen 328 EEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRD---------------DFSNLW 392 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcc---------------cccchH
Confidence 55555666777888999999999999999999999999999999999999988773211 111122
Q ss_pred HHHHhhhHHHHHHHHHHhcCCCCcc
Q 010112 217 IVLMVGALPAALTYYWRMRMPETAR 241 (518)
Q Consensus 217 ~~f~~~~~~~~~~~~~~~~~~esp~ 241 (518)
+..++..+..++.+.+..++|++.+
T Consensus 393 ~lili~~~~~ll~l~ll~lLp~~~~ 417 (433)
T PF03092_consen 393 LLILICSVIQLLPLPLLFLLPPQKR 417 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCch
Confidence 3444455555555666667777543
No 272
>PRK03612 spermidine synthase; Provisional
Probab=97.06 E-value=0.02 Score=57.50 Aligned_cols=122 Identities=21% Similarity=0.204 Sum_probs=74.9
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHH-HHHHHH-HHHHHhhhccCCchhhHHHHHHHHHHHhhhcc
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGI-TLILMV-ISSIASGLSFGKSAKGVIATLCFFRFWLGFGI 141 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~-~~~l~~-i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 141 (518)
|-+....+.+.+++++|.++|+..++++.++.-|+....- .+.+.+ ++..+....... .......++..-++.|+..
T Consensus 46 G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~~~~~~-~~~~~~~~~~~~~~~~~l~ 124 (521)
T PRK03612 46 GDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILYAAFAF-QGLSRLLLYVLVLLIGLLI 124 (521)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 7788899999999999999999999988744333322111 111111 111111111110 0000122344456677888
Q ss_pred ccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 142 GGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 142 g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
|+..|....+..+... ++-++..|-.+....+|.++|.++.+++.
T Consensus 125 G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 125 GMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 8888877776655332 23467788888899999999999987776
No 273
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.04 E-value=0.0015 Score=46.16 Aligned_cols=60 Identities=15% Similarity=0.128 Sum_probs=45.6
Q ss_pred HHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHH
Q 010112 311 AFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFF 382 (518)
Q Consensus 311 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~ 382 (518)
......-+.+.++++.|+++.+.+. ...+..+..+++.++.|.++||.++++........
T Consensus 15 ~~g~~~Pfl~~~~~~~Gl~~~~iGi------------l~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 15 ALGCLYPFLPLYLKQLGLSPSQIGI------------LSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHhhhhHhhhhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 4444556778888888888876444 66667778888999999999999999887765443
No 274
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.95 E-value=0.012 Score=59.92 Aligned_cols=179 Identities=10% Similarity=-0.011 Sum_probs=118.7
Q ss_pred HHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcccccc
Q 010112 319 QKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWT 398 (518)
Q Consensus 319 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (518)
...+=+..+++..+.+. +...+-++..+......+...|.-|-+.+-+|.++++++.++..+++....
T Consensus 120 IttiErRF~i~Ss~sG~------------I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~ 187 (735)
T KOG3626|consen 120 ITTIERRFKISSSQSGL------------IASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSG 187 (735)
T ss_pred hhhhhhhcCCCCCccee------------EeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcC
Confidence 33444456777776554 344444555555556677777888888888899999999888877632000
Q ss_pred C------------------------------------------CCc--hhHHHHHHHHHHHHHhcCccceeeeccccccc
Q 010112 399 L------------------------------------------KPN--RIGFVIMYSLTFFFANFGPNATTFVVPAEIFP 434 (518)
Q Consensus 399 ~------------------------------------------~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 434 (518)
. ..+ .+.++++.-++.+.+..-+.++..+|+-|-+.
T Consensus 188 ~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk 267 (735)
T KOG3626|consen 188 PYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVK 267 (735)
T ss_pred cchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccccc
Confidence 0 001 12223333344444555567788899999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCC-----cCCCCCCCccc-chhHHHHHHHHHHHHHHHHhhcccCCC
Q 010112 435 ARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPT-----KRDAGYPAGIG-VKNSLIMLGVVNFVGMICTLCVPESKG 508 (518)
Q Consensus 435 ~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~-----~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (518)
++......|+..++..+|-++|-.+.+.+...+... ..++..+...| |...|++.+.+.++..+.+++.|+...
T Consensus 268 ~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp 347 (735)
T KOG3626|consen 268 KKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELP 347 (735)
T ss_pred ccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCc
Confidence 999999999999999999988888888876544322 22333333444 677789999999999888887776555
Q ss_pred C
Q 010112 509 R 509 (518)
Q Consensus 509 ~ 509 (518)
+
T Consensus 348 ~ 348 (735)
T KOG3626|consen 348 K 348 (735)
T ss_pred c
Confidence 4
No 275
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.91 E-value=0.019 Score=47.04 Aligned_cols=100 Identities=12% Similarity=0.063 Sum_probs=70.0
Q ss_pred cccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccch
Q 010112 356 TVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPA 435 (518)
Q Consensus 356 ~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 435 (518)
..+.+++.+.+.+++|.|+.++++.+...+-........ .+.......+.+...+. .+...-.++.+...+
T Consensus 50 ~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~~~~~--------~~~l~~~s~l~G~~~a~-lW~aqg~ylt~~s~~ 120 (156)
T PF05978_consen 50 FAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASFFYPN--------SYTLYPASALLGFGAAL-LWTAQGTYLTSYSTE 120 (156)
T ss_pred HHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhhh--------HHHHHHHHHHHhhhhHH-hhHhhhHHHHHcCCH
Confidence 344566788899999999999999887776555544332 23333333344434333 445555778888888
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhHhhh
Q 010112 436 RLRSTCHGISAAAGKAGAIVGAFGFLYAA 464 (518)
Q Consensus 436 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~ 464 (518)
+.+++-.++...+.+.+.++|..+.-.+.
T Consensus 121 ~~~~~~~~ifw~i~~~s~i~G~~~~~~~~ 149 (156)
T PF05978_consen 121 ETIGRNTGIFWAIFQSSLIFGNLFLFFIF 149 (156)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888888776554
No 276
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=96.89 E-value=0.25 Score=45.16 Aligned_cols=73 Identities=18% Similarity=0.172 Sum_probs=54.0
Q ss_pred HHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhhHHhhhhcc
Q 010112 78 LCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYAN 157 (518)
Q Consensus 78 ~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~ 157 (518)
.+..+.++.+.+.+..++|-|.++.++.......-.. -+-+. +..++-.-.+.|++.+..+..--+|+++.-.
T Consensus 68 y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr------~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 68 YLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPR------YETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred hHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchh------HHhhccHHHhhccccccccccCcceecHHHH
Confidence 3445566666669999999999999888776543332 12233 6889999999999999998887777776654
No 277
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.89 E-value=0.00018 Score=67.22 Aligned_cols=112 Identities=10% Similarity=-0.053 Sum_probs=2.7
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcccccc-----C-CCchhHHHHHHHHHHHHHhcCc
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWT-----L-KPNRIGFVIMYSLTFFFANFGP 421 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~ 421 (518)
....+.++..+|+.+.++..-+..+++.+....+.=.+...++........ . -.+.+...++.. ..++.+.-.
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~-l~g~TNGyl 265 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILML-LFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHH-HHHHccchh
Confidence 567788899999988876432211333333332222222222222211000 0 011122222222 333333334
Q ss_pred cceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhh
Q 010112 422 NATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGF 460 (518)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~ 460 (518)
.+..+.+..+..++++|..+-.++...-.+|-.+|..+.
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp -HHHH----------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777888888888888887777777777766666554
No 278
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.72 E-value=0.046 Score=53.75 Aligned_cols=107 Identities=8% Similarity=0.034 Sum_probs=72.1
Q ss_pred chhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCC--------------C----------chhHHHHHHHHHH
Q 010112 359 GYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLK--------------P----------NRIGFVIMYSLTF 414 (518)
Q Consensus 359 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~----------~~~~~~~~~~~~~ 414 (518)
..++.+++++|++|++.............+++++......+. + ..|.....+...-
T Consensus 60 ~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~e 139 (472)
T TIGR00769 60 FMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAE 139 (472)
T ss_pred HHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHH
Confidence 355779999999999988776666655555555442101000 0 0122222333333
Q ss_pred HHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 415 FFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 415 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
........-+.|.+++|.+.+++..+-.++....+++|.++++.+..++.+
T Consensus 140 lw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 140 LWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334789999999999999999999999999999999999988764
No 279
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.59 E-value=0.00035 Score=70.20 Aligned_cols=176 Identities=13% Similarity=0.027 Sum_probs=1.1
Q ss_pred hHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccc
Q 010112 318 FQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHW 397 (518)
Q Consensus 318 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 397 (518)
-.+.+-+++++++.+.+. +....-++.++..++..++.+|..|-+.+-.+.++++++.+++.+++...
T Consensus 25 ~lttiErRF~l~S~~~G~------------i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGL------------ISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhc
Confidence 334444556777666444 67777777888777888888888888888899999999998887765311
Q ss_pred cCC---------------------------------------Cch---hHHHHHHHHHHHHHhcCccceeeeccccccch
Q 010112 398 TLK---------------------------------------PNR---IGFVIMYSLTFFFANFGPNATTFVVPAEIFPA 435 (518)
Q Consensus 398 ~~~---------------------------------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 435 (518)
... ... ..++++.-++.+.+..-..++..+|+-|.+++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 100 001 11222222233333444567788999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCC----C----cCCCCCCCccc-chhHHHHHHHHHHHHHHHHhhccc
Q 010112 436 RLRSTCHGISAAAGKAGAIVGAFGFLYAAQSKDP----T----KRDAGYPAGIG-VKNSLIMLGVVNFVGMICTLCVPE 505 (518)
Q Consensus 436 ~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~----~----~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~ 505 (518)
+..+...|+..+...+|-.+|-.+.+......-. + ..++..+...| |...|++.+.+.++..+..+..|+
T Consensus 173 ~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk 251 (539)
T PF03137_consen 173 KNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPK 251 (539)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred ccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 9999999999999989888888888877654321 1 12222333445 777788888888887777665543
No 280
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.58 E-value=0.049 Score=52.04 Aligned_cols=114 Identities=16% Similarity=0.206 Sum_probs=83.4
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHH--HH---HHHHhhhccCCchhhHHHHHHHHHHHhh
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILM--VI---SSIASGLSFGKSAKGVIATLCFFRFWLG 138 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~--~i---~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (518)
.-..++..+...+|.+|-.++.--...+ |+ |++.+.+.+-. .+ .....-+.++ .|..++.-+..|
T Consensus 277 ~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fips------i~ivf~lif~eG 346 (402)
T PF02487_consen 277 FSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPS------IWIVFVLIFYEG 346 (402)
T ss_pred CCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhH------HHHHHHHHHHHH
Confidence 3446788888888888877765433222 33 44433333222 22 2222334455 688888999999
Q ss_pred hccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 139 FGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 139 ~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
+..|..+......+.|-.|+++|..+++....+-++|..++.+++.++-
T Consensus 347 LlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le 395 (402)
T PF02487_consen 347 LLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLE 395 (402)
T ss_pred HhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999988775
No 281
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.45 E-value=0.18 Score=49.19 Aligned_cols=113 Identities=21% Similarity=0.152 Sum_probs=80.0
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhh---hcchhhHHHHHHHHHHHHHHHhhhccCCch------------hhHHHHHHHHHH
Q 010112 71 AAVNGVALCGTLAGQLFFGWLGD---KLGRKKVYGITLILMVISSIASGLSFGKSA------------KGVIATLCFFRF 135 (518)
Q Consensus 71 g~~~s~~~lg~~i~~~~~G~l~d---r~Grr~~~~~~~~l~~i~~~~~~~~~~~~~------------~~~~~~l~~~r~ 135 (518)
+.-.-...+|..++..+.+.+.+ |+||++.+.++.++..++.++.-....+.. .+.....++.-+
T Consensus 282 ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~ 361 (461)
T KOG3098|consen 282 AIYSIGIGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGF 361 (461)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHH
Confidence 33333444455555566666664 689999999999998888887765433211 112567778889
Q ss_pred HhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHH
Q 010112 136 WLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVAL 184 (518)
Q Consensus 136 l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~ 184 (518)
+.|++-+......+.++.+.. +++|..+.++...-..++..++.....
T Consensus 362 l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 362 LLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 999999999999999999999 578888888887777777666544443
No 282
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=96.44 E-value=0.018 Score=51.66 Aligned_cols=108 Identities=15% Similarity=0.019 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccchhh
Q 010112 70 SAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPLSA 149 (518)
Q Consensus 70 ~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~ 149 (518)
.|.+.-+-.+-..+..+....+.||+.--.-+.+..++.+.+..+.+++++ .++=+++-.+..++.|.....-.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s------~~~sL~GV~~aSissGlGEiTFL 137 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNS------VPMSLLGVVFASISSGLGEITFL 137 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccc------hhHHHhhhhhhhhcCCcceeehh
Confidence 455555555566666777777888865444455566778888889999998 67777788888888887666555
Q ss_pred HHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHh
Q 010112 150 TIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSS 188 (518)
Q Consensus 150 ~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~ 188 (518)
++-+. +|+. ..+-+..+.+.++++|..--..+.+
T Consensus 138 ~lss~-Y~~~----~i~~WSSGTGgAGliGa~SYa~lT~ 171 (409)
T KOG3880|consen 138 ALSSR-YPSI----VIAGWSSGTGGAGLIGASSYAFLTS 171 (409)
T ss_pred hhhcc-CCCc----eeccccCCCCcchhhhhhHHHHHhh
Confidence 54443 3322 3334444444455666555555554
No 283
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.28 E-value=0.074 Score=51.68 Aligned_cols=123 Identities=17% Similarity=0.109 Sum_probs=91.3
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhh---hccCCc-hhhHHHHHHHHHHHhhh
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASG---LSFGKS-AKGVIATLCFFRFWLGF 139 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~---~~~~~~-~~~~~~~l~~~r~l~G~ 139 (518)
|+++..+|..-+...+....+.+...++.+|+|..|.=+.++....+...++. +.+... ..-+...++.+-.+.=+
T Consensus 289 G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~ 368 (432)
T PF06963_consen 289 GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRI 368 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999998887777665443333322 222211 11113444445455545
Q ss_pred ccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 140 GIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 140 ~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
|.=+.-....-++.|..|+++||...|.-.+..++-.++-..++..+
T Consensus 369 GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~~~~ii~ 415 (432)
T PF06963_consen 369 GLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSFVLTIIF 415 (432)
T ss_pred HHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 55566778888999999999999999999999998888877776544
No 284
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=95.74 E-value=0.055 Score=52.29 Aligned_cols=117 Identities=10% Similarity=0.025 Sum_probs=76.7
Q ss_pred hHHHHHHHHHHHHHHHHhhccccccC-CCchhHHHHHHHHHHHHHhcCccceeeeccccccchh---hhhhHHHHHHHHH
Q 010112 374 AIQMMGFFFMTVFMFALAIPYHHWTL-KPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPAR---LRSTCHGISAAAG 449 (518)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~g~~~~~~ 449 (518)
+.+..+.++..++.+++.+....... .......+.+...+...+..+.-|....+..|.++++ .|.+.........
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 45667777778888775444321111 1111222333333344455556677777888888654 5677778888999
Q ss_pred HHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhc
Q 010112 450 KAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCV 503 (518)
Q Consensus 450 ~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 503 (518)
++|..+++.+.+++. ++.||...|.+.++..+++.+..+.-
T Consensus 82 n~G~~~~~~~~~~i~-------------~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQ-------------QNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHH-------------HCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhc-------------cccchhhhhhHHHHHHHHHHHHHHhC
Confidence 999999999999997 46799999999999988888776644
No 285
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.66 E-value=0.2 Score=46.37 Aligned_cols=129 Identities=15% Similarity=0.181 Sum_probs=77.4
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeee
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFV 427 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 427 (518)
......+....+.+..|.+.||.|||+.+..+......+.++...... .............+.......+....
T Consensus 44 ~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~ 117 (338)
T COG0477 44 LLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPN------VGLALLLILRLLQGLGGGGLLPVASA 117 (338)
T ss_pred HHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCcc------chHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 344444455555578999999999997777776553333333333321 11222222222122222234566778
Q ss_pred ccccccch-hhhhhHHHHHHH-HHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHH
Q 010112 428 VPAEIFPA-RLRSTCHGISAA-AGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVN 493 (518)
Q Consensus 428 ~~~~~~p~-~~~~~~~g~~~~-~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 493 (518)
+..|..|+ +.|+...+.... ...++..++|.+.+.+... ...+|+..+.......
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 174 (338)
T COG0477 118 LLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-----------LLWGWRAAFLLAALLG 174 (338)
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------HhcchHHHHHHHHHHH
Confidence 88899887 678888888888 5778889999777777643 1236666555554444
No 286
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=95.61 E-value=0.29 Score=46.91 Aligned_cols=125 Identities=8% Similarity=0.049 Sum_probs=82.9
Q ss_pred hhhhhhhhccChhHHHHHHHHHHHHHHHHhhccccccCCCchhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhH
Q 010112 362 FTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYHHWTLKPNRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTC 441 (518)
Q Consensus 362 ~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 441 (518)
....+.|.++-|++++.+.+...+...++.+... ...+-+.-+..+.... .-...++++=..+|+++--++
T Consensus 60 ~vflltd~l~Ykpviil~~~~~i~t~~lll~~~s--------v~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~v 130 (412)
T PF01770_consen 60 PVFLLTDYLRYKPVIILQALSYIITWLLLLFGTS--------VLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKV 130 (412)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCc--------HHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHH
Confidence 5568999999999999988887777777666542 2222222222222222 123444566666788888888
Q ss_pred HHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHhhcccC
Q 010112 442 HGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTLCVPES 506 (518)
Q Consensus 442 ~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (518)
.+......-+|..++..+.-.+... +..++.....+......++.++.+++|..
T Consensus 131 ts~~raa~l~g~~~s~~lgQllvs~-----------~~~sy~~L~~isl~~~~~a~~~~~fLP~~ 184 (412)
T PF01770_consen 131 TSYTRAATLVGRFISSLLGQLLVSF-----------GGVSYFQLNYISLASVSLALLIALFLPMP 184 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9888888888888888887766642 23466666666666677777777777654
No 287
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=94.44 E-value=0.54 Score=44.08 Aligned_cols=153 Identities=12% Similarity=0.067 Sum_probs=69.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhh-----h
Q 010112 295 GLHLFGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFID-----Y 369 (518)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-----r 369 (518)
++.++.+.+.+...++.+-.. .-.|.+++.-+.+-...+. ..+..-++.+ .+++..++| |
T Consensus 30 ~~~illLl~LYllQGiP~GL~-~~iP~lL~ak~vSyt~~a~---------fS~ay~P~sL-----KllWaPiVDs~y~k~ 94 (510)
T KOG3574|consen 30 RSSILLLLFLYLLQGIPLGLI-GAIPLLLQAKGVSYTSQAI---------FSFAYWPFSL-----KLLWAPIVDSVYSKR 94 (510)
T ss_pred hhhHHHHHHHHHHcCCchhHh-hhhHHHhcCCCcchhhhhh---------hhhhhhHHHH-----HHHHHhhhHHHHHHh
Confidence 344555666666655544333 3778888755544433221 1112233332 334556666 9
Q ss_pred ccChhHHHH-HHHHHHHHHHHHhhccccccC-CC---chhHHHHHHHHHHHHHhcCccceeeeccccccchhhhhhHHHH
Q 010112 370 MGRFAIQMM-GFFFMTVFMFALAIPYHHWTL-KP---NRIGFVIMYSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGI 444 (518)
Q Consensus 370 ~g~r~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~ 444 (518)
+||||.-+. ...+.+..+..+......+.. +. +.......+.++.+.... ---..-.++-.+..++.-|-+...
T Consensus 95 ~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAt-QDIAVDgwALtmLs~e~lgyaST~ 173 (510)
T KOG3574|consen 95 FGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAAT-QDIAVDGWALTMLSRENLGYASTC 173 (510)
T ss_pred hccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhh-hhhhhhHHHHHhcCHhhcCchhHH
Confidence 999886443 334444444444443332322 11 111111122222221111 111122233344556666655555
Q ss_pred HHHHHHHHHHHHHhhhHhh
Q 010112 445 SAAAGKAGAIVGAFGFLYA 463 (518)
Q Consensus 445 ~~~~~~~g~~~~~~~~g~l 463 (518)
.....+.|.+++..++-.+
T Consensus 174 q~Vg~~~GyfL~~~ifLaL 192 (510)
T KOG3574|consen 174 QSVGQTAGYFLGNVVFLAL 192 (510)
T ss_pred HHHHHhhhHHhhcceeeEe
Confidence 5555556666666555433
No 288
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.23 E-value=0.13 Score=36.94 Aligned_cols=72 Identities=8% Similarity=-0.012 Sum_probs=56.5
Q ss_pred HHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHH
Q 010112 311 AFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFAL 390 (518)
Q Consensus 311 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~ 390 (518)
.-+...-.+|...++.+++..+.+. ......++.++|.+...++.++..+++.+..+.+...+..+.+
T Consensus 7 gRFayTplLP~M~~~~~ls~~~ag~------------lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~m 74 (85)
T PF06779_consen 7 GRFAYTPLLPLMQADGGLSLSQAGW------------LASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAM 74 (85)
T ss_pred HHHHHHhHhHHHHHhcCCCHHHHHH------------HHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 3344555788888888887775333 7777888888999999999999888888898888888888887
Q ss_pred hhcc
Q 010112 391 AIPY 394 (518)
Q Consensus 391 ~~~~ 394 (518)
.+..
T Consensus 75 a~~~ 78 (85)
T PF06779_consen 75 ALTH 78 (85)
T ss_pred HHHh
Confidence 7665
No 289
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=93.94 E-value=0.23 Score=47.65 Aligned_cols=153 Identities=11% Similarity=0.083 Sum_probs=90.8
Q ss_pred HHHHHHHHHHHHHHHhHHhhHHHHHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhh----ccChh
Q 010112 299 FGTTSTWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDY----MGRFA 374 (518)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr----~g~r~ 374 (518)
+......+..-+.+.....+.+.++++.|......+. .....-+..++-.++.|..+|| +||||
T Consensus 35 i~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~------------iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRR 102 (498)
T KOG0637|consen 35 ISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSI------------IWLCGPLSGLLVQPLVGSASDRCTSRYGRRR 102 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccc------------cccccccccceeccccccccccccccccccc
Confidence 3344444445556666677888888888887765333 5555556666777888999997 68887
Q ss_pred HHHH-HHHHHHHHHHHHhhcccc----ccCCC--chhHHHHHHHHHHHHHhcC---ccceeeeccccccchhhhhh-HHH
Q 010112 375 IQMM-GFFFMTVFMFALAIPYHH----WTLKP--NRIGFVIMYSLTFFFANFG---PNATTFVVPAEIFPARLRST-CHG 443 (518)
Q Consensus 375 ~~~~-~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~-~~g 443 (518)
..+. +.....++++++...... ..... .....+.+..+........ .....-++..|+..++.+.+ +++
T Consensus 103 PfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 103 PFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred chHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccch
Confidence 7655 444555666665554321 01111 1112222222222222221 22334577788877666666 999
Q ss_pred HHHHHHHHHHHHHHhhhHhh
Q 010112 444 ISAAAGKAGAIVGAFGFLYA 463 (518)
Q Consensus 444 ~~~~~~~~g~~~~~~~~g~l 463 (518)
....+..+|+.+|-.+.++.
T Consensus 183 ~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hHHHHHHhcceeeeeccccc
Confidence 99888888888877766543
No 290
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=93.36 E-value=0.78 Score=45.59 Aligned_cols=109 Identities=9% Similarity=0.022 Sum_probs=70.0
Q ss_pred ccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccc----cccCCC--------------------chhHHHHHHHH
Q 010112 357 VPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYH----HWTLKP--------------------NRIGFVIMYSL 412 (518)
Q Consensus 357 ~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~----~~~~~~--------------------~~~~~~~~~~~ 412 (518)
++...+-.+++++++|+++.............++++... ..+.+. +.|.....+..
T Consensus 73 ~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~ 152 (491)
T PF03219_consen 73 ILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVM 152 (491)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 344556789999999998876655555444444443211 000000 01112222222
Q ss_pred HHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 413 TFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 413 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
.-..++....-+.|.+++|.++.++..+..++....+++|.+++..+..++.+
T Consensus 153 aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 153 AELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22233333334679999999999999999999999999999999999988875
No 291
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=91.89 E-value=3.7 Score=40.19 Aligned_cols=111 Identities=9% Similarity=0.052 Sum_probs=73.8
Q ss_pred hcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhccc----cccC-----------CC----------chhHHHHH
Q 010112 355 STVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPYH----HWTL-----------KP----------NRIGFVIM 409 (518)
Q Consensus 355 ~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~----~~~~-----------~~----------~~~~~~~~ 409 (518)
+.++..++-.++.++..++++..........+.+++++... ..+. .+ +.|.....
T Consensus 74 ~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~ 153 (509)
T COG3202 74 SAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLF 153 (509)
T ss_pred HHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHH
Confidence 34445566788888888888877666666666666554332 0000 01 11333334
Q ss_pred HHHHHHHHhcCccceeeeccccccchhhhhhHHHHHHHHHHHHHHHHHhhhHhhhh
Q 010112 410 YSLTFFFANFGPNATTFVVPAEIFPARLRSTCHGISAAAGKAGAIVGAFGFLYAAQ 465 (518)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~ 465 (518)
+.+.-...+....-+.|..++|+...++..+-.++.+...+++..++..+..++.+
T Consensus 154 Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k 209 (509)
T COG3202 154 YIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSK 209 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44433333443444778899999999999999999999999999999999988874
No 292
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=91.53 E-value=2.3 Score=41.82 Aligned_cols=118 Identities=10% Similarity=-0.008 Sum_probs=75.3
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhcchh--hHHHHH--HHHHHHHHHHhhhccCCc---hhhHHHHHHHHHHHhhhcc
Q 010112 69 VSAAVNGVALCGTLAGQLFFGWLGDKLGRK--KVYGIT--LILMVISSIASGLSFGKS---AKGVIATLCFFRFWLGFGI 141 (518)
Q Consensus 69 ~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr--~~~~~~--~~l~~i~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~ 141 (518)
..-....++.+|-.+|..+..+. ..-++| .+...+ =+++.-..++|..-++.+ ...+-+..++.-++.|+..
T Consensus 308 ~~~i~~~~fNvgD~vGR~~~~~~-~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltn 386 (437)
T TIGR00939 308 YPIICFLLFNLFDWLGRSLTSKF-MWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSN 386 (437)
T ss_pred HHHHHHHHHHHHHHHHhhhhhee-EeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhh
Confidence 34456677777777777755432 111223 332221 222222223333221000 0011366677799999999
Q ss_pred ccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 142 GGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 142 g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
|-....+..+..+..+++||..+..+...+..+|..+|..++..+.
T Consensus 387 Gy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~~~ 432 (437)
T TIGR00939 387 GYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFLFV 432 (437)
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999998876654
No 293
>PRK03612 spermidine synthase; Provisional
Probab=91.13 E-value=3.7 Score=41.54 Aligned_cols=49 Identities=20% Similarity=0.350 Sum_probs=34.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHH
Q 010112 438 RSTCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMI 498 (518)
Q Consensus 438 ~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 498 (518)
.+...|-......+|+++|+++.+.+.- ...|...+..+.+.+.++..+
T Consensus 143 ~g~~~g~ly~~ntlGa~~G~l~~~~vLl------------p~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 143 LGHNVATVLAADYLGALVGGLAFPFLLL------------PRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred hhhhhhhhHhHHhHHHHHHHHHHHHHHH------------HhcchHHHHHHHHHHHHHHHH
Confidence 4567788888899999999999998873 345655555555555544443
No 294
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=88.41 E-value=22 Score=33.32 Aligned_cols=118 Identities=16% Similarity=0.149 Sum_probs=71.1
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHH----HHHHHHH-HHHHHHhhhccCCchhhHHHHHHHHHHHhh
Q 010112 64 TLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVY----GITLILM-VISSIASGLSFGKSAKGVIATLCFFRFWLG 138 (518)
Q Consensus 64 ~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~----~~~~~l~-~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G 138 (518)
|-+--|.+.+.+.|.....+|+...-++.|.--.-+-+ +.|++.- +...+-..|+.+. ...-+.+.+.-++.|
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~--~~~~~Vly~lt~vIG 116 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALES--APSRLVLYALTAVIG 116 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhcc--chHHHHHHHHHHHHH
Confidence 55667899999999999999999999888754333222 2222222 1122222344432 112577888899999
Q ss_pred hccccccchhhHHhhh-hcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 139 FGIGGDYPLSATIMSE-YANKKTRGAFIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 139 ~~~g~~~~~~~~~i~e-~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
.-.|.-.|..+.++.. ....+. ..+..-..-.+|.+.+.++-.++
T Consensus 117 ~LVG~EiPL~mrml~~r~a~~k~---~~s~vl~~DYLGal~~gLl~p~l 162 (508)
T COG4262 117 VLVGAEIPLLMRMLQRRQAKAKD---LGSRVLTLDYLGALAGGLLWPFL 162 (508)
T ss_pred HHHhcchHHHHHHHHHHHHHHHh---hhhhhhhhHhhhhhhHHHHHHHH
Confidence 9999999999998876 222121 22222222455665555554443
No 295
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=85.29 E-value=6.5 Score=37.74 Aligned_cols=114 Identities=14% Similarity=0.012 Sum_probs=76.0
Q ss_pred CchhhHHHHHH-HHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHH-h------hhccCCchhhHHHHHHHHHHHh
Q 010112 66 PPNVSAAVNGV-ALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIA-S------GLSFGKSAKGVIATLCFFRFWL 137 (518)
Q Consensus 66 s~~~~g~~~s~-~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~-~------~~~~~~~~~~~~~~l~~~r~l~ 137 (518)
++...-.+..+ +.+.-.+|.+...++-++=.|+..+...+=+..+-.+. | .+-.+ -+++++.-.+.
T Consensus 280 ~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~~v~~~~------~~~~~~l~~~l 353 (406)
T KOG1479|consen 280 GDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPLPVVFES------DGWFIFLMSLL 353 (406)
T ss_pred chhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCCCceecC------chHHHHHHHHH
Confidence 34444555556 78888888776666655443333332222222222222 1 11122 37788899999
Q ss_pred hhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHH
Q 010112 138 GFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALI 185 (518)
Q Consensus 138 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~ 185 (518)
|+..|=.......+..+-.|++++-.+-.+.......|...|..++..
T Consensus 354 glsnGYltsl~m~~aPk~v~~~e~e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 354 GLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred HhccchHhhheehhcCCCCChHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 999999889999999999999999888888888888888888777644
No 296
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=83.98 E-value=31 Score=35.38 Aligned_cols=133 Identities=14% Similarity=0.191 Sum_probs=79.5
Q ss_pred cccchhhhhhhhhhc-cChhHHHHHHHHHHHHHHHHhhcccccc--------------CC-CchhHHHHH--HHHHHHHH
Q 010112 356 TVPGYWFTVAFIDYM-GRFAIQMMGFFFMTVFMFALAIPYHHWT--------------LK-PNRIGFVIM--YSLTFFFA 417 (518)
Q Consensus 356 ~~~~~~~~g~l~dr~-g~r~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~~~~~~~~--~~~~~~~~ 417 (518)
.....+.+++++|.+ ||-+.+.++.++..+++.++........ .. .......++ ..-....+
T Consensus 86 ~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G 165 (571)
T KOG1237|consen 86 QFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALG 165 (571)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheec
Confidence 334556788999985 7888888888887777655544322110 00 011111111 11122224
Q ss_pred hcCccceeeeccccccc----hhhhh--hHHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHH
Q 010112 418 NFGPNATTFVVPAEIFP----ARLRS--TCHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGV 491 (518)
Q Consensus 418 ~~~~~~~~~~~~~~~~p----~~~~~--~~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 491 (518)
..+.-|.....-.|-++ .+.+. .-+.......+.|..++..+.-++. ++.+|...|.+..+
T Consensus 166 ~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq-------------~~~~w~lgf~i~~~ 232 (571)
T KOG1237|consen 166 AGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ-------------DNVGWKLGFGIPTV 232 (571)
T ss_pred cCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh-------------hcccceeeccHHHH
Confidence 44555666667777776 22223 4455566666788888887777775 56688888888888
Q ss_pred HHHHHHHHHh
Q 010112 492 VNFVGMICTL 501 (518)
Q Consensus 492 ~~~~~~~~~~ 501 (518)
+.+++.++++
T Consensus 233 ~~~lai~iF~ 242 (571)
T KOG1237|consen 233 LNALAILIFL 242 (571)
T ss_pred HHHHHHHHHH
Confidence 8887776665
No 297
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=83.73 E-value=1.5 Score=39.14 Aligned_cols=53 Identities=11% Similarity=-0.008 Sum_probs=31.8
Q ss_pred HHHHhcCCCCCcchhhhHHHHHHHHHHHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHH
Q 010112 322 IFSAIGWIPPAATMNAIHEVYKIARAQTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVF 386 (518)
Q Consensus 322 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 386 (518)
+.+.+|+...+.+. .++......++...+.|-+.||.|||+.-+.-.+...++
T Consensus 63 LYstYgFgkG~Igq------------LfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLs 115 (454)
T KOG4332|consen 63 LYSTYGFGKGDIGQ------------LFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILS 115 (454)
T ss_pred eehhcCccCCccce------------eeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHH
Confidence 34455666555443 444444445555567788999999999765544433333
No 298
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=80.86 E-value=37 Score=30.47 Aligned_cols=99 Identities=19% Similarity=0.280 Sum_probs=54.2
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhh-cchhhHHH----HHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 69 VSAAVNGVALCGTLAGQLFFGWLGDK-LGRKKVYG----ITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 69 ~~g~~~s~~~lg~~i~~~~~G~l~dr-~Grr~~~~----~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
......-++..|..+|....|..... +.||+-+. .+.+++.++.++ +....+.+...+..+++.-|+.|++.=+
T Consensus 142 ~~~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~-~~~~g~~~~~~~~~f~I~~Fl~G~f~Wg 220 (267)
T PF07672_consen 142 IIPIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVV-VYFVGPGNAAGFAFFYIFGFLAGFFLWG 220 (267)
T ss_pred hhHHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHH-HHHhCcchHHHHHHHHHHHHHHHHHHHh
Confidence 33455556666667777777777764 44555433 344555555554 3222222223367788888999986655
Q ss_pred ccchhhHHhhhhc--ccccchhHHHHH
Q 010112 144 DYPLSATIMSEYA--NKKTRGAFIAAV 168 (518)
Q Consensus 144 ~~~~~~~~i~e~~--~~~~rg~~~~~~ 168 (518)
..++...+=.|.= .|++-|...|+.
T Consensus 221 iQ~ViL~lPhEyK~~~pk~ig~~Fg~i 247 (267)
T PF07672_consen 221 IQGVILNLPHEYKGYNPKKIGIQFGLI 247 (267)
T ss_pred hhHHHhcChhhhcCCCcceehhHHHHH
Confidence 5555444434432 344455555543
No 299
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=75.67 E-value=22 Score=33.46 Aligned_cols=98 Identities=9% Similarity=-0.105 Sum_probs=71.3
Q ss_pred chhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHH--HHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccc
Q 010112 67 PNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLI--LMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGD 144 (518)
Q Consensus 67 ~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~--l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~ 144 (518)
...-|..-++..+.++++++..|++--++.|..-++++.. ..+...+++.-..+ +|..+++-++.+.-....
T Consensus 270 ~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~------Iw~~Ya~yvlfr~~y~l~ 343 (433)
T KOG3810|consen 270 NVYNGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQH------IWVCYAGYVLFRVIYQLT 343 (433)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccc------eehhhhhHHHHHhhHhhh
Confidence 3455777888888999999999999888877644444433 33333344444444 688778877777777777
Q ss_pred cchhhHHhhhhcccccchhHHHHHHH
Q 010112 145 YPLSATIMSEYANKKTRGAFIAAVFA 170 (518)
Q Consensus 145 ~~~~~~~i~e~~~~~~rg~~~~~~~~ 170 (518)
.+++..-+++....+.-|..+|+...
T Consensus 344 itiA~~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 344 ITIATFQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred hhHHHHHHHHhhhhhhheeeeehHHH
Confidence 88888889998888888888877654
No 300
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=70.83 E-value=13 Score=34.28 Aligned_cols=113 Identities=12% Similarity=0.069 Sum_probs=76.1
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhc-chhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhccccccch
Q 010112 69 VSAAVNGVALCGTLAGQLFFGWLGDKL-GRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGGDYPL 147 (518)
Q Consensus 69 ~~g~~~s~~~lg~~i~~~~~G~l~dr~-Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~ 147 (518)
|.-|....|.+|-.++.--.-..--++ ---..+..-.+++.+...+..+.++ ++...+.-+.-|+-.|..+..
T Consensus 289 qYRwyqvlYQlGVFiSRSS~~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftps------i~ivf~lI~~EGLlGGasYVN 362 (409)
T KOG3880|consen 289 QYRWYQVLYQLGVFISRSSINLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPS------IWIVFALILFEGLLGGASYVN 362 (409)
T ss_pred cchhhheeeeeeEEEEeccceEEechHHHHHHHHHHHHHHHHHHHHHHHhccH------HHHHHHHHHHHhhcCchHHHH
Confidence 567888888877654432221111110 0001122233344455556677777 688888889999988888887
Q ss_pred hhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 148 SATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVS 187 (518)
Q Consensus 148 ~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~ 187 (518)
..--+.+-.++++|-.+++....+-++|..++..++-.+-
T Consensus 363 Tf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalplh 402 (409)
T KOG3880|consen 363 TFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPLH 402 (409)
T ss_pred HHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccch
Confidence 7777888888899999999999999999988888776553
No 301
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=69.00 E-value=60 Score=31.03 Aligned_cols=74 Identities=18% Similarity=0.096 Sum_probs=46.6
Q ss_pred HHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHH
Q 010112 26 VIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITL 105 (518)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~ 105 (518)
+.+.+++++....--...+.....+.++. +-|-.....-.-.-.....+..++.|...|+..|+|++...+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~---------gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L 100 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLG---------GNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWL 100 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHc---------CceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHH
Confidence 45556677766666666666666666651 222223333333333445677778888999999999988777
Q ss_pred HHH
Q 010112 106 ILM 108 (518)
Q Consensus 106 ~l~ 108 (518)
.+.
T Consensus 101 ~lq 103 (503)
T KOG2601|consen 101 LLQ 103 (503)
T ss_pred hhc
Confidence 664
No 302
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=65.76 E-value=39 Score=34.30 Aligned_cols=25 Identities=4% Similarity=0.125 Sum_probs=15.3
Q ss_pred HHHHHHhhcccchhhhhhhhhhccC
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGR 372 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~ 372 (518)
......+.+.+++..++++...++.
T Consensus 302 ~i~~y~~~~~iaGy~S~~~yk~~~g 326 (521)
T PF02990_consen 302 AIILYALTSFIAGYVSARLYKSFGG 326 (521)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHcCC
Confidence 3444555566666667777776664
No 303
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=64.98 E-value=2.2 Score=39.94 Aligned_cols=115 Identities=11% Similarity=0.147 Sum_probs=3.8
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhh-cchhhHHHHH--HHHHHHHHHHhhhccCCc----hhhHHHHHHHHHHHhhhccccc
Q 010112 72 AVNGVALCGTLAGQLFFGWLGDK-LGRKKVYGIT--LILMVISSIASGLSFGKS----AKGVIATLCFFRFWLGFGIGGD 144 (518)
Q Consensus 72 ~~~s~~~lg~~i~~~~~G~l~dr-~Grr~~~~~~--~~l~~i~~~~~~~~~~~~----~~~~~~~l~~~r~l~G~~~g~~ 144 (518)
....++.++-.+|....++.-=+ -.+|++...+ =+++.-..++|..-+..+ -.++-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 35667888888888877653211 1244433321 122222222221111100 0011366777889999999999
Q ss_pred cchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 010112 145 YPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIV 186 (518)
Q Consensus 145 ~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l 186 (518)
......+..+..++++|..+..+......+|..+|..++..+
T Consensus 266 ~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~~ 307 (309)
T PF01733_consen 266 STLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFLL 307 (309)
T ss_dssp -HHHH-------------------------------------
T ss_pred hhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999998888888888888888776543
No 304
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=62.52 E-value=1e+02 Score=26.68 Aligned_cols=43 Identities=21% Similarity=0.315 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHhhhhhhhhh---hhhcchhhHHHHHHHHHHHHHHH
Q 010112 72 AVNGVALCGTLAGQLFFGWL---GDKLGRKKVYGITLILMVISSIA 114 (518)
Q Consensus 72 ~~~s~~~lg~~i~~~~~G~l---~dr~Grr~~~~~~~~l~~i~~~~ 114 (518)
.......+++.+|...++.+ .+|..+|+.....+.+..+..+.
T Consensus 50 ~~~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~ 95 (209)
T PF06912_consen 50 LRYLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLI 95 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHH
Confidence 33445555666677777766 23344444444444444433333
No 305
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=62.22 E-value=15 Score=29.80 Aligned_cols=34 Identities=6% Similarity=0.051 Sum_probs=26.8
Q ss_pred cceeeeccccccchhhhhhHHHHHHHHHHHHHHH
Q 010112 422 NATTFVVPAEIFPARLRSTCHGISAAAGKAGAIV 455 (518)
Q Consensus 422 ~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~g~~~ 455 (518)
..+.|.+++..-.++..|+..|+-.+-.+++.+.
T Consensus 112 lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 112 LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 3466777777778888999999999888876654
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=59.91 E-value=35 Score=25.54 Aligned_cols=39 Identities=23% Similarity=0.217 Sum_probs=25.9
Q ss_pred hhHHHHHHHHHHHHhhhhhhhhhhhhc-chhhHHHHHHHH
Q 010112 69 VSAAVNGVALCGTLAGQLFFGWLGDKL-GRKKVYGITLIL 107 (518)
Q Consensus 69 ~~g~~~s~~~lg~~i~~~~~G~l~dr~-Grr~~~~~~~~l 107 (518)
....-.+.=+++..+.....||+.||| |-++..++..++
T Consensus 43 ~~a~klssefIsGilVGa~iG~llD~~agTsPwglIv~ll 82 (116)
T COG5336 43 AQAFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLL 82 (116)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHH
Confidence 445556666777777778889999996 555554443333
No 307
>COG3619 Predicted membrane protein [Function unknown]
Probab=51.71 E-value=1.7e+02 Score=25.79 Aligned_cols=123 Identities=15% Similarity=0.170 Sum_probs=58.8
Q ss_pred chhhHHHHHHHHHHHHhhhhhhhhhhhhcch-hh-H-HHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhh-----
Q 010112 67 PNVSAAVNGVALCGTLAGQLFFGWLGDKLGR-KK-V-YGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLG----- 138 (518)
Q Consensus 67 ~~~~g~~~s~~~lg~~i~~~~~G~l~dr~Gr-r~-~-~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G----- 138 (518)
+...........+..++|......+..|..| .. . ...+.++..+.....++.++.. .+....+..-+.+|
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~--~~~~~~il~~f~mg~Qnas 131 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESS--PDFVAVILVAFAMGIQNAS 131 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHHHH
Confidence 4466667777777888886666655555554 12 2 2333333333344444433211 11344444444444
Q ss_pred ------hccccccch-----hhHHhhhhccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 139 ------FGIGGDYPL-----SATIMSEYANKKT-RGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 139 ------~~~g~~~~~-----~~~~i~e~~~~~~-rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
...+..+.. ...-+.++...|+ .-..-...+...-++.++|...++.+...++
T Consensus 132 f~k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 132 FRKVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HHHhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 322222111 1122344444432 2223334445555677777777777765554
No 308
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=51.05 E-value=1.9e+02 Score=26.01 Aligned_cols=24 Identities=4% Similarity=0.066 Sum_probs=15.6
Q ss_pred hhhhhhhhccChhHHHHHHHHHHH
Q 010112 362 FTVAFIDYMGRFAIQMMGFFFMTV 385 (518)
Q Consensus 362 ~~g~l~dr~g~r~~~~~~~~~~~~ 385 (518)
.+-+++.|+..|++.+.+..+..+
T Consensus 259 gGk~lAskIS~rtVt~~ggi~Fi~ 282 (294)
T KOG2881|consen 259 GGKYLASKISVRTVTLIGGILFII 282 (294)
T ss_pred hhHHHhhhheeEEEEEecchhHHH
Confidence 345677888888777766555443
No 309
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=49.83 E-value=41 Score=25.26 Aligned_cols=52 Identities=13% Similarity=0.105 Sum_probs=43.9
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhcc
Q 010112 68 NVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSF 119 (518)
Q Consensus 68 ~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~ 119 (518)
...|-+.++|.-.+.+.++.+++..|+.-+-+.=.++..+..++..+..+.+
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 5678889999999999999999999999888887778888777777766654
No 310
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=49.56 E-value=1.1e+02 Score=22.91 Aligned_cols=27 Identities=11% Similarity=0.087 Sum_probs=15.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 165 IAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 165 ~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
+|.......+..++|..+|-++-..++
T Consensus 45 ~g~IG~~~v~pil~G~~lG~WLD~~~~ 71 (100)
T TIGR02230 45 FGLIGWSVAIPTLLGVAVGIWLDRHYP 71 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 334444455556666777777755544
No 311
>PRK02237 hypothetical protein; Provisional
Probab=45.05 E-value=67 Score=24.21 Aligned_cols=52 Identities=13% Similarity=0.066 Sum_probs=43.0
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhcc
Q 010112 68 NVSAAVNGVALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSF 119 (518)
Q Consensus 68 ~~~g~~~s~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~ 119 (518)
+..|=+.+.|.-.+++.++.+++..|+.-+-+-=.+|..+..++..+..+.+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 3478889999999999999999999999887777777777777777666554
No 312
>COG1288 Predicted membrane protein [Function unknown]
Probab=44.22 E-value=2.2e+02 Score=27.84 Aligned_cols=32 Identities=16% Similarity=0.204 Sum_probs=18.2
Q ss_pred CCCcchHHHHhhhHHHHHHHHHH--hcCCCCcch
Q 010112 211 ADYVWRIVLMVGALPAALTYYWR--MRMPETARY 242 (518)
Q Consensus 211 ~~~~wr~~f~~~~~~~~~~~~~~--~~~~esp~~ 242 (518)
+..+||...++......+..+.+ ..++++|..
T Consensus 214 sG~~~Riv~~v~~~~~~i~y~~~Ya~KvkkdP~~ 247 (481)
T COG1288 214 SGMGLRIVVWVVFTLISIIYVYWYASKVKKDPTL 247 (481)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 35569999988665544433322 335555543
No 313
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=40.15 E-value=2.3e+02 Score=30.14 Aligned_cols=43 Identities=35% Similarity=0.257 Sum_probs=31.2
Q ss_pred chhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 96 GRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 96 Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
||.+-++++.++++++++...+...+ .+.+...-++.+++.++
T Consensus 55 ~R~~~l~it~~~f~i~sl~v~ll~~~-----p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 55 GRLKNLIITLSCFSIASFLVQLLFPK-----PWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc-----hHHHHHHHHHHHHHHHH
Confidence 56777999999999999988877664 45666666666665443
No 314
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=39.33 E-value=2.8e+02 Score=29.47 Aligned_cols=50 Identities=32% Similarity=0.180 Sum_probs=33.7
Q ss_pred hhhhhh----cchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 89 GWLGDK----LGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 89 G~l~dr----~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+-++|. -||.+-++++.++++++++...+...+ .+.+..+-++.+++.++
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~-----p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGK-----PWLFAVGLTVSTFGFIM 97 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----cHHHHHHHHHHHHHHHH
Confidence 445553 356677889999999888888776664 46666666666554443
No 315
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=39.10 E-value=1.5e+02 Score=22.42 Aligned_cols=34 Identities=6% Similarity=0.078 Sum_probs=28.4
Q ss_pred chhhhhhHHHHHHHHHHHHHHHHHhhhHhhhhcC
Q 010112 434 PARLRSTCHGISAAAGKAGAIVGAFGFLYAAQSK 467 (518)
Q Consensus 434 p~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 467 (518)
.++.++.+.++-...-.+++++.....|++.|.+
T Consensus 36 a~s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 36 AESIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4567888888888888899999999999999754
No 316
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=37.61 E-value=1.5e+02 Score=22.22 Aligned_cols=31 Identities=6% Similarity=-0.094 Sum_probs=17.3
Q ss_pred chhhhhhhhhhccChhHHHHHHHHHHHHHHH
Q 010112 359 GYWFTVAFIDYMGRFAIQMMGFFFMTVFMFA 389 (518)
Q Consensus 359 ~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 389 (518)
|.+++-|+-++++......+.+++.+++..+
T Consensus 59 G~~lG~WLD~~~~t~~~~tl~~lllGv~~G~ 89 (100)
T TIGR02230 59 GVAVGIWLDRHYPSPFSWTLTMLIVGVVIGC 89 (100)
T ss_pred HHHHHHHHHhhcCCCcHHHHHHHHHHHHHHH
Confidence 4445556666678766555555554444433
No 317
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=36.61 E-value=21 Score=31.92 Aligned_cols=65 Identities=18% Similarity=0.220 Sum_probs=46.2
Q ss_pred HHHHHHHhhhhhhhHHHHHHHhhhhhhhcccCCCCCCCCCCchhhHHHHHHHHHHHHhhhhhhhhh---------hhhcc
Q 010112 26 VIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAKKPGTLPPNVSAAVNGVALCGTLAGQLFFGWL---------GDKLG 96 (518)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~s~~~~g~~~s~~~lg~~i~~~~~G~l---------~dr~G 96 (518)
+.-..+.+.+-......-..+-...++. +.++.....+.-+..+.-++..++.|.. .||+|
T Consensus 20 f~yGvGHmlNDitAScWFTYlllfltqi----------glsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G 89 (412)
T KOG4830|consen 20 FAYGVGHMLNDITASCWFTYLLLFLTQI----------GLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIG 89 (412)
T ss_pred eeechhHHHhhHHHHHHHHHHHHHHHHh----------cCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhc
Confidence 3444556666665555555555555566 7888888888888888888988888755 46999
Q ss_pred hhhH
Q 010112 97 RKKV 100 (518)
Q Consensus 97 rr~~ 100 (518)
||+.
T Consensus 90 ~~~~ 93 (412)
T KOG4830|consen 90 RRMS 93 (412)
T ss_pred ceee
Confidence 9876
No 318
>PRK11469 hypothetical protein; Provisional
Probab=36.33 E-value=2e+02 Score=24.51 Aligned_cols=46 Identities=22% Similarity=0.182 Sum_probs=26.0
Q ss_pred hhHHHHHHHHHHHH-hhhhhhhhhhhhcchhhHHHHHHHHHHHHHHH
Q 010112 69 VSAAVNGVALCGTL-AGQLFFGWLGDKLGRKKVYGITLILMVISSIA 114 (518)
Q Consensus 69 ~~g~~~s~~~lg~~-i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~ 114 (518)
..........+... .|...+.++.+++|||.-++-|.++..++.-+
T Consensus 135 ~~~~~ig~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 135 ATALAIGCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33333333333333 33334445666778887788888877776543
No 319
>PRK11469 hypothetical protein; Provisional
Probab=34.39 E-value=2.9e+02 Score=23.53 Aligned_cols=41 Identities=12% Similarity=0.068 Sum_probs=23.5
Q ss_pred HHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHH
Q 010112 349 TLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFA 389 (518)
Q Consensus 349 ~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 389 (518)
.....+....|..++.++.++++||.-++.+.++..++.-.
T Consensus 141 g~~s~~~~~~G~~lG~~~g~~~g~~a~~lgG~iLI~iGi~i 181 (188)
T PRK11469 141 GCATLIMSTLGMMVGRFIGSIIGKKAEILGGLVLIGIGVQI 181 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444445556666667777777666666555555443
No 320
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=34.17 E-value=1.8e+02 Score=23.77 Aligned_cols=49 Identities=18% Similarity=0.255 Sum_probs=34.7
Q ss_pred HHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHH
Q 010112 127 IATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILA 178 (518)
Q Consensus 127 ~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~l 178 (518)
+..++..-++.|+|. ..+.+..++-..++++.|..+|+-..-.+++.+.
T Consensus 97 ~~~~~~S~~~Fg~gl---lGisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGL---LGISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hHHHHHHHHHHHHHH---HhhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 455555555555543 3456677777888888999999988888887654
No 321
>PRK10263 DNA translocase FtsK; Provisional
Probab=31.87 E-value=3.6e+02 Score=30.80 Aligned_cols=22 Identities=18% Similarity=0.111 Sum_probs=13.7
Q ss_pred HHHHHHHhhhhhhhhhhhhcch
Q 010112 76 VALCGTLAGQLFFGWLGDKLGR 97 (518)
Q Consensus 76 ~~~lg~~i~~~~~G~l~dr~Gr 97 (518)
+-.+++.+|..+...+..-||-
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhH
Confidence 3445666666666666666664
No 322
>TIGR00267 conserved hypothetical protein TIGR00267. This family is represented in three of the first four completed archaeal genomes, with two members in A. fulgidus.
Probab=31.46 E-value=3.1e+02 Score=22.90 Aligned_cols=23 Identities=9% Similarity=0.128 Sum_probs=12.8
Q ss_pred hhhhhhhhhhccChhHHHHHHHH
Q 010112 360 YWFTVAFIDYMGRFAIQMMGFFF 382 (518)
Q Consensus 360 ~~~~g~l~dr~g~r~~~~~~~~~ 382 (518)
-++.|++.-|+++++....+.-.
T Consensus 130 L~ilG~~~a~~s~~~~~~s~lr~ 152 (169)
T TIGR00267 130 LLVLGVYLGRISRENILISSLKM 152 (169)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHH
Confidence 33556677777666555444333
No 323
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=31.44 E-value=1.8e+02 Score=26.83 Aligned_cols=37 Identities=27% Similarity=0.216 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhhcccc
Q 010112 102 GITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGFGIGG 143 (518)
Q Consensus 102 ~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~ 143 (518)
+.+++++++++++..+...+ .+.+.+.-++.+++.++
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~-----~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPY-----PWLLILVLALLTFFFGM 39 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhc-----cHHHHHHHHHHHHHHHH
Confidence 45555565666666665553 35555555555554443
No 324
>COG4769 Predicted membrane protein [Function unknown]
Probab=30.87 E-value=46 Score=27.20 Aligned_cols=52 Identities=12% Similarity=0.110 Sum_probs=36.0
Q ss_pred HHHHHHHhhhhhhhhhhhhcchhhHHHHHHHHHHHHHHHhhhccCCchhhHHHHHHHHHHHhhh
Q 010112 76 VALCGTLAGQLFFGWLGDKLGRKKVYGITLILMVISSIASGLSFGKSAKGVIATLCFFRFWLGF 139 (518)
Q Consensus 76 ~~~lg~~i~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 139 (518)
++....++.+...-++..++|+|.+-.+|...+ -++.+| +.++++.+++.|-
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hN------l~QLivas~Lv~~ 132 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHN------LGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHh------HHHHHHHHHHHhc
Confidence 344555666777778888999888755444332 355667 8999999998764
No 325
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=30.60 E-value=1.3e+02 Score=25.43 Aligned_cols=24 Identities=25% Similarity=0.515 Sum_probs=20.7
Q ss_pred HHHHHHHHHhhhhhhhhhhhhcch
Q 010112 74 NGVALCGTLAGQLFFGWLGDKLGR 97 (518)
Q Consensus 74 ~s~~~lg~~i~~~~~G~l~dr~Gr 97 (518)
+.-|.+++.+++.+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 456788899999999999999986
No 326
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=28.43 E-value=1.1e+02 Score=24.81 Aligned_cols=26 Identities=31% Similarity=0.482 Sum_probs=21.9
Q ss_pred HHHHHHHHHhhhhhhhhhhhhcchhh
Q 010112 74 NGVALCGTLAGQLFFGWLGDKLGRKK 99 (518)
Q Consensus 74 ~s~~~lg~~i~~~~~G~l~dr~Grr~ 99 (518)
+.-|.+|+.+.+.+.|++.+|..+++
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccc
Confidence 45678888999999999999988864
No 327
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=28.06 E-value=5.7e+02 Score=25.93 Aligned_cols=65 Identities=8% Similarity=0.063 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhhhccccccchhhHHhhhhcccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 010112 127 IATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGIVALIVSSAFD 191 (518)
Q Consensus 127 ~~~l~~~r~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~lG~~lg~~l~~~l~~~~~ 191 (518)
|..+++.-++.-+..-..+.+..++-+.+.+|.-=|+.|.+.++..++|+---..+.-++.+.+.
T Consensus 405 f~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 405 FLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 45556666777777777788899999999999999999999999999998887777777776665
No 328
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=27.79 E-value=4.6e+02 Score=23.70 Aligned_cols=23 Identities=4% Similarity=-0.161 Sum_probs=12.5
Q ss_pred chHHHHhhhHHHHHHHHHHhcCC
Q 010112 215 WRIVLMVGALPAALTYYWRMRMP 237 (518)
Q Consensus 215 wr~~f~~~~~~~~~~~~~~~~~~ 237 (518)
..+.-++..++.++...+..+++
T Consensus 114 ~~~Ln~~G~~l~~~~~~~f~fik 136 (254)
T PF07857_consen 114 SPWLNYIGVALVLVSGIIFSFIK 136 (254)
T ss_pred hhHHHHHHHHHHHHHHHheeeec
Confidence 44555566566666655554443
No 329
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=27.60 E-value=5.4e+02 Score=24.47 Aligned_cols=24 Identities=17% Similarity=0.279 Sum_probs=17.2
Q ss_pred hhhhhhhhhhccChhHHHHHHHHH
Q 010112 360 YWFTVAFIDYMGRFAIQMMGFFFM 383 (518)
Q Consensus 360 ~~~~g~l~dr~g~r~~~~~~~~~~ 383 (518)
+.+.+.+++++|.|+.+.++....
T Consensus 75 ~m~~~~~Ir~~g~K~tm~lav~~Y 98 (390)
T KOG3097|consen 75 SMFMPLLIRFLGTKWTMVLAVFPY 98 (390)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Confidence 334458899999999987764443
No 330
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=27.42 E-value=2.8e+02 Score=21.10 Aligned_cols=21 Identities=19% Similarity=0.207 Sum_probs=12.9
Q ss_pred hhccccccchhhHHhhhhccc
Q 010112 138 GFGIGGDYPLSATIMSEYANK 158 (518)
Q Consensus 138 G~~~g~~~~~~~~~i~e~~~~ 158 (518)
+.|.-+..+...++..|...-
T Consensus 60 ~tGf~GgfTTFSTf~~e~~~l 80 (108)
T PRK14229 60 ATGFCGGLTTFSTLNDELQRL 80 (108)
T ss_pred HhhHccccccHHHHHHHHHHH
Confidence 333334466777788887754
No 331
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=27.12 E-value=1.2e+02 Score=19.99 Aligned_cols=19 Identities=26% Similarity=0.478 Sum_probs=15.7
Q ss_pred cchHHHHhhhHHHHHHHHH
Q 010112 214 VWRIVLMVGALPAALTYYW 232 (518)
Q Consensus 214 ~wr~~f~~~~~~~~~~~~~ 232 (518)
+||...++.++++++.+.+
T Consensus 4 g~r~~~~~ggfVg~iG~a~ 22 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAAL 22 (58)
T ss_pred cccchhhHHHHHHHHHHHH
Confidence 5999999999988887654
No 332
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=24.69 E-value=1.1e+02 Score=20.35 Aligned_cols=27 Identities=15% Similarity=0.279 Sum_probs=16.1
Q ss_pred cchHHHHhhhHHH---HH-HHHHHhcCCCCc
Q 010112 214 VWRIVLMVGALPA---AL-TYYWRMRMPETA 240 (518)
Q Consensus 214 ~wr~~f~~~~~~~---~~-~~~~~~~~~esp 240 (518)
-+|..|.+..++. ++ -++.++.+|+.|
T Consensus 30 ~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 30 LVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 3788887765543 22 234456678765
No 333
>PRK10697 DNA-binding transcriptional activator PspC; Provisional
Probab=24.47 E-value=1.6e+02 Score=22.90 Aligned_cols=13 Identities=0% Similarity=-0.041 Sum_probs=8.0
Q ss_pred HHHHhcCCCCcch
Q 010112 230 YYWRMRMPETARY 242 (518)
Q Consensus 230 ~~~~~~~~esp~~ 242 (518)
+++++.+|+.|..
T Consensus 57 i~l~~~lp~~P~~ 69 (118)
T PRK10697 57 IILSFALDPMPDN 69 (118)
T ss_pred HHHHHhccCCccc
Confidence 3446678877754
No 334
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=23.50 E-value=2.2e+02 Score=18.64 Aligned_cols=29 Identities=7% Similarity=0.197 Sum_probs=18.7
Q ss_pred CCcchHHHHhhhHHHHHHHHHHhcCCCCc
Q 010112 212 DYVWRIVLMVGALPAALTYYWRMRMPETA 240 (518)
Q Consensus 212 ~~~wr~~f~~~~~~~~~~~~~~~~~~esp 240 (518)
+++++...++..+.+++...+...+|+++
T Consensus 28 ~~n~~~~~Ii~vi~~i~~~~~~~~i~~~~ 56 (57)
T PF11151_consen 28 TYNFTTAAIIAVIFGIIVANIIAVIPKKS 56 (57)
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 45577777777777777666655566543
No 335
>PF04281 Tom22: Mitochondrial import receptor subunit Tom22 ; InterPro: IPR005683 The mitochondrial protein translocase family, which is responsible for movement of nuclear encoded pre-proteins into mitochondria, is very complex with at least 19 components. These proteins include several chaperone proteins, four proteins of the outer membrane translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family represents the Tom22 proteins []. The N-terminal region of Tom22 has been shown to have chaperone-like activity, and the C-terminal region faces the intermembrane face []. ; GO: 0006886 intracellular protein transport, 0005741 mitochondrial outer membrane
Probab=23.25 E-value=2.7e+02 Score=22.30 Aligned_cols=23 Identities=22% Similarity=0.368 Sum_probs=17.9
Q ss_pred cccccchhhhhhHHHHHHHHHHH
Q 010112 429 PAEIFPARLRSTCHGISAAAGKA 451 (518)
Q Consensus 429 ~~~~~p~~~~~~~~g~~~~~~~~ 451 (518)
+.|++|+..|..+.+..+.....
T Consensus 60 Lkdi~P~~~R~~i~~~~~~~~~~ 82 (137)
T PF04281_consen 60 LKDIFPPSVRNWISSTVSTTSSA 82 (137)
T ss_pred HhccCCHHHHHHHHHHHHHHHHH
Confidence 46899999999888877765544
No 336
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=23.21 E-value=2e+02 Score=20.85 Aligned_cols=41 Identities=7% Similarity=0.061 Sum_probs=30.2
Q ss_pred HHHhhhhhhhhhhhhcch-------hhHHHHHHHHHHHHHHHhhhccC
Q 010112 80 GTLAGQLFFGWLGDKLGR-------KKVYGITLILMVISSIASGLSFG 120 (518)
Q Consensus 80 g~~i~~~~~G~l~dr~Gr-------r~~~~~~~~l~~i~~~~~~~~~~ 120 (518)
+.....+..+++.+|.-+ ++.+..+.++...+..+++..++
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS 77 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRS 77 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHh
Confidence 444566677777777655 77888888888888888887665
No 337
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=22.23 E-value=2.2e+02 Score=21.56 Aligned_cols=46 Identities=15% Similarity=0.192 Sum_probs=33.0
Q ss_pred HHHHHHhhcccchhhhhhhhhhccChhHHHHHHHHHHHHHHHHhhcc
Q 010112 348 QTLIALCSTVPGYWFTVAFIDYMGRFAIQMMGFFFMTVFMFALAIPY 394 (518)
Q Consensus 348 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~ 394 (518)
......+..+++. ..-+.+|.+.|+...+...+..++++.++....
T Consensus 6 ~L~lAi~~EV~~~-~~lK~s~gf~~~~~~il~~v~~~~sf~~Ls~al 51 (106)
T COG2076 6 YLLLAILLEVVGT-TLLKYSDGFTRLWPSILTIVGYGLSFYLLSLAL 51 (106)
T ss_pred HHHHHHHHHHHHH-HHHHHHhcccccchHHHHHHHHHHHHHHHHHHH
Confidence 4445555666554 456789999999888888888888877777665
No 338
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=22.08 E-value=3.4e+02 Score=20.18 Aligned_cols=46 Identities=17% Similarity=0.184 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhHhhhhcCCCCcCCCCCCCcccchhHHHHHHHHHHHHHHHHh
Q 010112 441 CHGISAAAGKAGAIVGAFGFLYAAQSKDPTKRDAGYPAGIGVKNSLIMLGVVNFVGMICTL 501 (518)
Q Consensus 441 ~~g~~~~~~~~g~~~~~~~~g~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 501 (518)
++|.....-..+-.++....-.+. ..|-.+|.+++++.+.+.....
T Consensus 26 ~~GfslS~L~~slgv~Q~~~kvia---------------lQWIFAFvI~avlfv~sl~vav 71 (97)
T PF08611_consen 26 AMGFSLSYLTASLGVGQFFIKVIA---------------LQWIFAFVIAAVLFVLSLVVAV 71 (97)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHh
Confidence 444444444444455555543332 3566778888888887776655
No 339
>TIGR00986 3a0801s05tom22 mitochondrial import receptor subunit Tom22. translocase (Tom) import receptor, five proteins of the Tom channel complex, five proteins of the inner membrane translocase (Tim) and three "motor" proteins. This family is specific for the Tom22 proteins.
Probab=21.94 E-value=2.5e+02 Score=22.57 Aligned_cols=23 Identities=13% Similarity=0.047 Sum_probs=17.7
Q ss_pred cccccchhhhhhHHHHHHHHHHH
Q 010112 429 PAEIFPARLRSTCHGISAAAGKA 451 (518)
Q Consensus 429 ~~~~~p~~~~~~~~g~~~~~~~~ 451 (518)
+.|++|+..|..+....+.....
T Consensus 58 LkDm~Pp~~R~~i~~~~s~t~s~ 80 (145)
T TIGR00986 58 LKDIVPPTTRGWIYHKYSTTTNF 80 (145)
T ss_pred HHhhCCHHHHHHHHHHHHHHHHH
Confidence 46899999999888777765543
Done!