BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010119
(518 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 163/385 (42%), Positives = 220/385 (57%), Gaps = 51/385 (13%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
MRL R +DFE L +IG+GAFGEV + + K ++FAMK L K EMLKR + R
Sbjct: 69 MRLHR-----EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFRE 123
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSEDVARFYIAE 214
ER++L DS+ I L Y+FQD + LYL+M+Y GGD++TLL + ED L E++ARFY+AE
Sbjct: 124 ERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAE 183
Query: 215 SVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
V+AI S+HQ +YVHRDIKPDN+++D NGH++L+DFG C L ED Q
Sbjct: 184 MVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM----------EDGTVQS 233
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-----KKGYGMECDWWS 329
+V+ VGT DY++PE+L K YG ECDWWS
Sbjct: 234 SVA---------------------------VGTPDYISPEILQAMEGGKGRYGPECDWWS 266
Query: 330 LGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLLCDVET 388
LG MYEML G PF ++ T KI+N K +FP + +S+ A+DLI L+C E
Sbjct: 267 LGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREH 326
Query: 389 RLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSV 448
RLG G+E+ K+HP+F GI WD + EA Y P V+ DT NF+ + +P
Sbjct: 327 RLGQNGIEDFKKHPFFSGIDWDNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMPP- 385
Query: 449 GPWRKMLTSKDTNFIGYTFKKSDVL 473
P + F+G+T+ S VL
Sbjct: 386 -PTHTAFSGHHLPFVGFTYTSSCVL 409
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 222/386 (57%), Gaps = 48/386 (12%)
Query: 88 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKR 147
L R + +++ ++ +D+E + +IG+GAFGEV+L R K+T +++AMK L K EM+KR
Sbjct: 56 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR 115
Query: 148 GQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV 207
ER+++A +S +VQLFY+FQD +LY++MEY+PGGD++ L+ D+ E
Sbjct: 116 SDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKW 174
Query: 208 ARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
ARFY AE VLA+ +IH ++HRD+KPDN++LDK+GHLKL+DFG C +
Sbjct: 175 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM----------- 223
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG----YGM 323
N+E + + + VGT DY++PEVL +G YG
Sbjct: 224 ----NKEGMVRCD----------------------TAVGTPDYISPEVLKSQGGDGYYGR 257
Query: 324 ECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL 383
ECDWWS+G +YEML+G PF +D T KI+N K L FP++ IS EA++LIC L
Sbjct: 258 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL 317
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQ--WDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGP 441
D E RLG GVEE+K H +F+ Q W+ L + A P ++ ++DT NF+ E G
Sbjct: 318 TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGE 377
Query: 442 PSEIPSVGPWRKMLTSKDTNFIGYTF 467
P K F+G+T+
Sbjct: 378 EETFPI----PKAFVGNQLPFVGFTY 399
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 282 bits (722), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 222/386 (57%), Gaps = 48/386 (12%)
Query: 88 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKR 147
L R + +++ ++ +D+E + +IG+GAFGEV+L R K+T +++AMK L K EM+KR
Sbjct: 51 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR 110
Query: 148 GQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV 207
ER+++A +S +VQLFY+FQD +LY++MEY+PGGD++ L+ D+ E
Sbjct: 111 SDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKW 169
Query: 208 ARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
ARFY AE VLA+ +IH ++HRD+KPDN++LDK+GHLKL+DFG C +
Sbjct: 170 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM----------- 218
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG----YGM 323
N+E + + + VGT DY++PEVL +G YG
Sbjct: 219 ----NKEGMVRCD----------------------TAVGTPDYISPEVLKSQGGDGYYGR 252
Query: 324 ECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL 383
ECDWWS+G +YEML+G PF +D T KI+N K L FP++ IS EA++LIC L
Sbjct: 253 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL 312
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQ--WDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGP 441
D E RLG GVEE+K H +F+ Q W+ L + A P ++ ++DT NF+ E G
Sbjct: 313 TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGE 372
Query: 442 PSEIPSVGPWRKMLTSKDTNFIGYTF 467
P K F+G+T+
Sbjct: 373 EETFPI----PKAFVGNQLPFVGFTY 394
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 282 bits (721), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 152/386 (39%), Positives = 222/386 (57%), Gaps = 48/386 (12%)
Query: 88 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKR 147
L R + +++ ++ +D+E + +IG+GAFGEV+L R K+T +++AMK L K EM+KR
Sbjct: 56 LSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKR 115
Query: 148 GQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV 207
ER+++A +S +VQLFY+FQD +LY++MEY+PGGD++ L+ D+ E
Sbjct: 116 SDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDV-PEKW 174
Query: 208 ARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
ARFY AE VLA+ +IH ++HRD+KPDN++LDK+GHLKL+DFG C +
Sbjct: 175 ARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKM----------- 223
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG----YGM 323
N+E + + + VGT DY++PEVL +G YG
Sbjct: 224 ----NKEGMVRCD----------------------TAVGTPDYISPEVLKSQGGDGYYGR 257
Query: 324 ECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL 383
ECDWWS+G +YEML+G PF +D T KI+N K L FP++ IS EA++LIC L
Sbjct: 258 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL 317
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQ--WDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGP 441
D E RLG GVEE+K H +F+ Q W+ L + A P ++ ++DT NF+ E G
Sbjct: 318 TDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGE 377
Query: 442 PSEIPSVGPWRKMLTSKDTNFIGYTF 467
P K F+G+T+
Sbjct: 378 EETFPI----PKAFVGNQLPFVGFTY 399
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 274 bits (700), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 147/388 (37%), Positives = 224/388 (57%), Gaps = 48/388 (12%)
Query: 88 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKR 147
L R E +++ ++ +D++ + +IG+GAFGEV+L R K + +++AMK L K EM+KR
Sbjct: 57 LNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKR 116
Query: 148 GQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV 207
ER+++A +S +VQLF +FQD +LY++MEY+PGGD++ L+ D+ E
Sbjct: 117 SDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDV-PEKW 175
Query: 208 ARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
A+FY AE VLA+ +IH +HRD+KPDN++LDK+GHLKL+DFG C + +++
Sbjct: 176 AKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTC---------MKMDE 226
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG----YGM 323
+++ +T VGT DY++PEVL +G YG
Sbjct: 227 TGMVHCDT----------------------------AVGTPDYISPEVLKSQGGDGYYGR 258
Query: 324 ECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL 383
ECDWWS+G ++EML+G PF +D T KI++ K L FPE+ +IS A++LIC L
Sbjct: 259 ECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFL 318
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQ--WDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGP 441
D E RLG GVEE+K+HP+F+ Q WD + E A P ++ ++D+ NF+ + G
Sbjct: 319 TDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGD 378
Query: 442 PSEIPSVGPWRKMLTSKDTNFIGYTFKK 469
P K FIG+T+ +
Sbjct: 379 VETFPI----PKAFVGNQLPFIGFTYYR 402
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 217/379 (57%), Gaps = 51/379 (13%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M+L R +DFE + +IG+GAFGEV + + K T I+AMK L K EMLKR + R
Sbjct: 85 MQLHR-----EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFRE 139
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSEDVARFYIAE 214
ER++L D + I L Y+FQD + LYL+M+Y GGD++TLL + ED L ED+ARFYI E
Sbjct: 140 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 199
Query: 215 SVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
VLAI SIHQ +YVHRDIKPDN++LD NGH++L+DFG C + D D Q
Sbjct: 200 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND----------DGTVQS 249
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL--LKKG---YGMECDWWS 329
+V+ VGT DY++PE+L ++ G YG ECDWWS
Sbjct: 250 SVA---------------------------VGTPDYISPEILQAMEDGMGKYGPECDWWS 282
Query: 330 LGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLLCDVET 388
LG MYEML G PF ++ T KI+N + +FP +S+EA+DLI L+C E
Sbjct: 283 LGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRER 342
Query: 389 RLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSV 448
RLG G+E+ K+H +F G+ W+ + +EA Y P V+ DT NF+ +V +P
Sbjct: 343 RLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNTEILPPG 402
Query: 449 GPWRKMLTSKDTNFIGYTF 467
+ FIG+TF
Sbjct: 403 S--HTGFSGLHLPFIGFTF 419
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 160/379 (42%), Positives = 217/379 (57%), Gaps = 51/379 (13%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M+L R +DFE + +IG+GAFGEV + + K T I+AMK L K EMLKR + R
Sbjct: 69 MQLHR-----EDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFRE 123
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSEDVARFYIAE 214
ER++L D + I L Y+FQD + LYL+M+Y GGD++TLL + ED L ED+ARFYI E
Sbjct: 124 ERDVLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGE 183
Query: 215 SVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
VLAI SIHQ +YVHRDIKPDN++LD NGH++L+DFG C + D D Q
Sbjct: 184 MVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMND----------DGTVQS 233
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL--LKKG---YGMECDWWS 329
+V+ VGT DY++PE+L ++ G YG ECDWWS
Sbjct: 234 SVA---------------------------VGTPDYISPEILQAMEDGMGKYGPECDWWS 266
Query: 330 LGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLLCDVET 388
LG MYEML G PF ++ T KI+N + +FP +S+EA+DLI L+C E
Sbjct: 267 LGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRER 326
Query: 389 RLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSV 448
RLG G+E+ K+H +F G+ W+ + +EA Y P V+ DT NF+ +V +P
Sbjct: 327 RLGQNGIEDFKKHAFFEGLNWENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNTEILPPG 386
Query: 449 GPWRKMLTSKDTNFIGYTF 467
+ FIG+TF
Sbjct: 387 S--HTGFSGLHLPFIGFTF 403
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 255 bits (651), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 146/355 (41%), Positives = 204/355 (57%), Gaps = 46/355 (12%)
Query: 88 LERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKR 147
L+ E +RL+ ++ DDFE L +IG+GAF EV + + K TG+++AMK + K +MLKR
Sbjct: 43 LQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKR 102
Query: 148 GQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSED 206
G+V R ER++L D R I QL ++FQD ++LYL+MEY GGD++TLL + + + +
Sbjct: 103 GEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAE 162
Query: 207 VARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ARFY+AE V+AI S+H+ YVHRDIKPDN++LD+ GH++L+DFG C L
Sbjct: 163 MARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKL---------- 212
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL-------LKK 319
A+G R+L VGT DY++PE+L
Sbjct: 213 -----------RADG--------------TVRSLV--AVGTPDYLSPEILQAVGGGPGTG 245
Query: 320 GYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFP-EEPKISDEARDL 378
YG ECDWW+LG YEM G PF +D T KIV++K L P + + +EARD
Sbjct: 246 SYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDF 305
Query: 379 ICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKLYEMEAAYKPTVNGELDTQNFE 433
I LLC ETRLG G + + HP+F G+ WD L + + P G DT NF+
Sbjct: 306 IQRLLCPPETRLGRGGAGDFRTHPFFFGLDWDGLRDSVPPFTPDFEGATDTCNFD 360
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 227 bits (578), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/344 (35%), Positives = 191/344 (55%), Gaps = 51/344 (14%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
K + DF+ L +G G+FG V L R++ G +AMK LKK +++ QVEH ER +L+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
V I++++ +FQD+ +++IM+Y+ GG++ +LL + VA+FY AE LA+
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEY 121
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H + ++RD+KP+N++LDKNGH+K++DFG K + D
Sbjct: 122 LHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----------------------- 158
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+ Y GT DY+APEV+ K Y DWWS G ++YEML GY
Sbjct: 159 ------------------VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 200
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLGT--RGVEEL 398
PF + T KI+N + L+FP P +++ +DL+ L+ D+ RLG G E++
Sbjct: 201 TPFYDSNTMKTYEKILNAE--LRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDV 256
Query: 399 KEHPWFRGIQWDKLY--EMEAAYKPTV-NGELDTQNFEKFPEVD 439
K HPWF+ + W+KL +E Y+P + G+ DT F+K+PE D
Sbjct: 257 KNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDKYPEED 300
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 226 bits (575), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 199/353 (56%), Gaps = 55/353 (15%)
Query: 102 KIGIDDFEQLTLIGKGAFG---EVRLCRAKTTGEIFAMKKLKKSEMLKRGQ-VEHVRSER 157
KI + FE L ++GKG +G +VR TG+IFAMK LKK+ +++ + H ++ER
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
N+L EV IV L Y+FQ LYLI+EYL GG++ L RE I ED A FY+AE +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
A+ +HQ ++RD+KP+N++L+ GH+KL+DFGLCK + I+ TV+
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--------------ESIHDGTVT 178
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
++ GT++YMAPE+L++ G+ DWWSLGA+MY+M
Sbjct: 179 ------------------------HTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDM 214
Query: 338 LIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLGT--RG 394
L G PPF ++ + T KI+ K L P P ++ EARDL+ LL + +RLG
Sbjct: 215 LTGAPPFTGENRKKTIDKILKCK--LNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGD 270
Query: 395 VEELKEHPWFRGIQWDKLY--EMEAAYKPTVNGELDTQNFE-KFPE---VDGP 441
E++ HP+FR I W++L ++E +KP + E D F+ KF VD P
Sbjct: 271 AGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSP 323
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 224 bits (572), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 136/353 (38%), Positives = 198/353 (56%), Gaps = 55/353 (15%)
Query: 102 KIGIDDFEQLTLIGKGAFG---EVRLCRAKTTGEIFAMKKLKKSEMLKRGQ-VEHVRSER 157
KI + FE L ++GKG +G +VR TG+IFAMK LKK+ +++ + H ++ER
Sbjct: 13 KIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAER 72
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
N+L EV IV L Y+FQ LYLI+EYL GG++ L RE I ED A FY+AE +
Sbjct: 73 NILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISM 132
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
A+ +HQ ++RD+KP+N++L+ GH+KL+DFGLCK + I+ TV+
Sbjct: 133 ALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--------------ESIHDGTVT 178
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
+ GT++YMAPE+L++ G+ DWWSLGA+MY+M
Sbjct: 179 ------------------------HXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDM 214
Query: 338 LIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLGT--RG 394
L G PPF ++ + T KI+ K L P P ++ EARDL+ LL + +RLG
Sbjct: 215 LTGAPPFTGENRKKTIDKILKCK--LNLP--PYLTQEARDLLKKLLKRNAASRLGAGPGD 270
Query: 395 VEELKEHPWFRGIQWDKLY--EMEAAYKPTVNGELDTQNFE-KFPE---VDGP 441
E++ HP+FR I W++L ++E +KP + E D F+ KF VD P
Sbjct: 271 AGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSP 323
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 221 bits (563), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 187/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG FAMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L YSF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ IG G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGGD+ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 187/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG FAMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L YSF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/338 (35%), Positives = 187/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG FAMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L YSF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 220 bits (560), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ IG G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGGD+ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR------------------------- 194
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 195 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 219 bits (557), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY PGG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ + W
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----------------------TWX 198
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 199 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 187/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 61 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 218
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 219 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 260 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 315
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 316 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 353
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 119/338 (35%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ IG G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 218 bits (556), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 152
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------- 187
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 188 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 232 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 287
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 288 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 325
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 187/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 198
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 199 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 218 bits (555), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 187/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 198
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 199 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 217 bits (553), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------- 195
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 196 ----------------TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 216 bits (551), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 198
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 199 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++ H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 216 bits (550), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 33 LDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 92
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R E ARFY A+ VL +H
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 152
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 153 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------- 187
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 188 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 232 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 287
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 288 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 325
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 216 bits (550), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 198
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 199 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K ++EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFGL K ++ + W
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 216 bits (549), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------- 194
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 195 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 215 bits (548), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 26 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 85
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 86 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 145
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 146 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------- 180
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 181 ----------------TWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTR--GVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 225 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNH 280
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 281 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 318
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 215 bits (547), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 214 bits (546), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + K TG +AMK L K +++K Q+EH +E+ + V+
Sbjct: 41 LDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY+++EY PGG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ + W
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGR----------------------TWX 198
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 199 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 184/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+ +L +SF+D+ LY++MEY PGG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ + W
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----------------------TWX 198
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 199 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 214 bits (546), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 184/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY PGG++ + L R E ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 117/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K ++EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY PGG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFGL K ++ + W
Sbjct: 160 LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 214 bits (546), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 183/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+ +L +SF+D+ LY++MEY PGG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------------------------- 195
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 196 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------AGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 184/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R E ARFY A+ VL +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------- 195
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 196 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 184/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R E ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------- 194
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 195 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 184/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+PGG++ + L R E ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------- 194
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 195 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 214 bits (544), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 180
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K +
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV---------------------------- 212
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ ++ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 213 -------------KGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 260 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 315
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 316 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 353
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 213 bits (543), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------XGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NLI+D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE+++ KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 187/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D+P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADEPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 213 bits (542), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 161 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 198
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 199 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 182/338 (53%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 41 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 100
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+ +L +SF+D+ LY++MEY PGG++ + L R E ARFY A+ VL +H
Sbjct: 101 FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 160
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G++K++DFG K ++ +
Sbjct: 161 LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGR------------------------- 195
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 196 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 240 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 295
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 296 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 333
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 213 bits (541), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 212 bits (539), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 116/338 (34%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D FE++ +G G+FG V L + TG +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 212 bits (539), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++Y+M GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 211 bits (538), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 27 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 86
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 87 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 146
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 147 LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGR------------------------- 181
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 182 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 226 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 281
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 282 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 319
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 211 bits (538), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 186/338 (55%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R +E ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 211 bits (537), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+AP ++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 211 bits (536), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 61 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 120
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R E ARFY A+ VL +H
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 180
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 181 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 218
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 219 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 260 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 315
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 316 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 353
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R E ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R E ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 184/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 35 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 94
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R E ARFY A+ VL +H
Sbjct: 95 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 154
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ +
Sbjct: 155 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------------- 189
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 190 ----------------TWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 234 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 289
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 290 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 327
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R E ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 210 bits (535), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 209 bits (533), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT + +APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT NF+ + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEE 332
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 209 bits (533), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/338 (33%), Positives = 185/338 (54%), Gaps = 50/338 (14%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D F+++ +G G+FG V L + K +G +AMK L K +++K Q+EH +E+ +L V+
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN 99
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+L +SF+D+ LY++MEY+ GG++ + L R SE ARFY A+ VL +H
Sbjct: 100 FPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ ++RD+KP+NL++D+ G+++++DFG K ++ + W
Sbjct: 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR----------------------TWX 197
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT +Y+APE++L KGY DWW+LG ++YEM GYPPF
Sbjct: 198 L-------------------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGT--RGVEELKEH 401
+D P KIV+ K ++FP S + +DL+ +LL D+ R G GV ++K H
Sbjct: 239 FADQPIQIYEKIVSGK--VRFPSH--FSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNH 294
Query: 402 PWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEKFPE 437
WF W +Y+ +EA + P G DT N + + E
Sbjct: 295 KWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNADDYEE 332
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 125/332 (37%), Positives = 177/332 (53%), Gaps = 47/332 (14%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN-LLAEVDS 165
DF L +IGKG+FG+V L R K +A+K L+K +LK+ + +H+ SERN LL V
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
+V L +SFQ +D LY +++Y+ GG++ L RE E ARFY AE A+ +H
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL 158
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
N V+RD+KP+N++LD GH+ L+DFGLCK E+I + T S
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCK-------------ENIEHNSTTS-------- 197
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+ GT +Y+APEVL K+ Y DWW LGA++YEML G PPF
Sbjct: 198 -----------------TFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFY 240
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLGTR-GVEELKEHPW 403
S + I+N LK P I++ AR L+ LL D RLG + E+K H +
Sbjct: 241 SRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVF 296
Query: 404 FRGIQWDKLY--EMEAAYKPTVNGELDTQNFE 433
F I WD L ++ + P V+G D ++F+
Sbjct: 297 FSLINWDDLINKKITPPFNPNVSGPNDLRHFD 328
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/349 (35%), Positives = 192/349 (55%), Gaps = 51/349 (14%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKT---TGEIFAMKKLKKSEMLKRGQ 149
T +++ K FE L ++G+G+FG+V L R T +G ++AMK LKK+ + R +
Sbjct: 15 THHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR 74
Query: 150 VEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVAR 209
V + ER++LA+V+ +V+L Y+FQ LYLI+++L GGD+ T L +E + +E+ +
Sbjct: 75 VR-TKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVK 133
Query: 210 FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDED 269
FY+AE L + +H ++RD+KP+N++LD+ GH+KL+DFGL
Sbjct: 134 FYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS---------------- 177
Query: 270 IINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWS 329
KE + K+ AYS GT++YMAPEV+ ++G+ DWWS
Sbjct: 178 -----------------KEAIDHEKK-----AYSFCGTVEYMAPEVVNRQGHSHSADWWS 215
Query: 330 LGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVET 388
G +M+EML G PF D + T I+ K L P+ +S EA+ L+ L +
Sbjct: 216 YGVLMFEMLTGSLPFQGKDRKETMTLIL--KAKLGMPQF--LSTEAQSLLRALFKRNPAN 271
Query: 389 RLGTR--GVEELKEHPWFRGIQWDKLY--EMEAAYKPTVNGELDTQNFE 433
RLG+ G EE+K H ++ I W+KLY E++ +KP V DT F+
Sbjct: 272 RLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFD 320
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 182/341 (53%), Gaps = 48/341 (14%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+ ++ +++FE L L+GKG FG+V L + K TG +AMK LKK ++ + +V H +E +
Sbjct: 142 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 201
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
L + L YSFQ D L +MEY GG++ L RE + SED ARFY AE V A+
Sbjct: 202 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 261
Query: 220 HSIH-QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+H + N V+RD+K +NL+LDK+GH+K++DFGLCK E I + T+
Sbjct: 262 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------------EGIKDGATMK- 307
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ GT +Y+APEVL YG DWW LG +MYEM+
Sbjct: 308 ------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 343
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGV 395
G PF + D I+ + ++FP + EA+ L+ LL D + RL G+
Sbjct: 344 CGRLPFYNQDHEKLFELILMEE--IRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDA 399
Query: 396 EELKEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEK 434
+E+ +H +F GI W +YE + +KP V E DT+ F++
Sbjct: 400 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 440
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 196 bits (499), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/341 (36%), Positives = 182/341 (53%), Gaps = 48/341 (14%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+ ++ +++FE L L+GKG FG+V L + K TG +AMK LKK ++ + +V H +E +
Sbjct: 145 KHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 204
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
L + L YSFQ D L +MEY GG++ L RE + SED ARFY AE V A+
Sbjct: 205 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 264
Query: 220 HSIH-QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+H + N V+RD+K +NL+LDK+GH+K++DFGLCK E I + T+
Sbjct: 265 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------------EGIKDGATMK- 310
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ GT +Y+APEVL YG DWW LG +MYEM+
Sbjct: 311 ------------------------TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 346
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGV 395
G PF + D I+ + ++FP + EA+ L+ LL D + RL G+
Sbjct: 347 CGRLPFYNQDHEKLFELILMEE--IRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDA 402
Query: 396 EELKEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEK 434
+E+ +H +F GI W +YE + +KP V E DT+ F++
Sbjct: 403 KEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 443
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 196 bits (498), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 191/350 (54%), Gaps = 53/350 (15%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG----EIFAMKKLKKSEMLKRG 148
T +++ K FE L ++G+G+FG+V L + K +G +++AMK LKK+ + R
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 69
Query: 149 QVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVA 208
+V + ER++L EV+ IV+L Y+FQ LYLI+++L GGD+ T L +E + +E+
Sbjct: 70 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Query: 209 RFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDE 268
+FY+AE LA+ +H ++RD+KP+N++LD+ GH+KL+DFGL
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS--------------- 173
Query: 269 DIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWW 328
KE + K+ AYS GT++YMAPEV+ ++G+ DWW
Sbjct: 174 ------------------KESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSADWW 210
Query: 329 SLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVE 387
S G +M+EML G PF D + T I+ K L P+ +S EA+ L+ L +
Sbjct: 211 SFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQ--FLSPEAQSLLRMLFKRNPA 266
Query: 388 TRLGTR--GVEELKEHPWFRGIQWDKLY--EMEAAYKPTVNGELDTQNFE 433
RLG GVEE+K H +F I W+KLY E+ +KP DT F+
Sbjct: 267 NRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFD 316
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 196 bits (497), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 127/365 (34%), Positives = 199/365 (54%), Gaps = 53/365 (14%)
Query: 82 EEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCR---AKTTGEIFAMKK 138
E++L T + K+GI++FE L ++G GA+G+V L R TG+++AMK
Sbjct: 30 EQLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKV 89
Query: 139 LKKSEMLKRGQV-EHVRSERNLLAEV-DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTL 196
LKK+ ++++ + EH R+ER +L + S +V L Y+FQ L+LI++Y+ GG++ T
Sbjct: 90 LKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTH 149
Query: 197 LMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPL 256
L + + +E + Y+ E VLA+ +H+ ++RDIK +N++LD NGH+ L+DFGL K
Sbjct: 150 LSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK-- 207
Query: 257 EDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL 316
+ + ET ER AY GT++YMAP+++
Sbjct: 208 ------------EFVADET------------ER-----------AYDFCGTIEYMAPDIV 232
Query: 317 LK--KGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVN--WKTCLKFPEEPKIS 372
G+ DWWSLG +MYE+L G PF D + + +I K+ +P+E +S
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQE--MS 290
Query: 373 DEARDLICHLLC-DVETRLGT--RGVEELKEHPWFRGIQWDKLY--EMEAAYKPTVNGEL 427
A+DLI LL D + RLG R +E+KEH +F+ I WD L ++ A +KP + EL
Sbjct: 291 ALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDEL 350
Query: 428 DTQNF 432
D NF
Sbjct: 351 DVSNF 355
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 194 bits (494), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 121/339 (35%), Positives = 179/339 (52%), Gaps = 47/339 (13%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
R K+ ++DF+ L L+GKG FG+V L R K TG +AMK L+K ++ + +V H +E +
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
L + L Y+FQ D L +MEY GG++ L RE + +E+ ARFY AE V A+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 121
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+H + V+RDIK +NL+LDK+GH+K++DFGLCK E +S+
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------------------EGISDG 162
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
A + GT +Y+APEVL YG DWW LG +MYEM+
Sbjct: 163 -------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMC 203
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVE 396
G PF + D I+ + ++FP +S EA+ L+ LL D + RL G +
Sbjct: 204 GRLPFYNQDHERLFELILMEE--IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAK 259
Query: 397 ELKEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFE 433
E+ EH +F I W + + + +KP V E+DT+ F+
Sbjct: 260 EVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 298
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 194 bits (494), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 180/339 (53%), Gaps = 48/339 (14%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
++ +++FE L L+GKG FG+V L + K TG +AMK LKK ++ + +V H +E +L
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 63
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ L YSFQ D L +MEY GG++ L RE + SED ARFY AE V A+
Sbjct: 64 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 222 IH-QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H + N V+RD+K +NL+LDK+GH+K++DFGLCK E I + T+
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------------EGIKDGATMK--- 167
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
GT +Y+APEVL YG DWW LG +MYEM+ G
Sbjct: 168 ----------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 205
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVEE 397
PF + D I+ + ++FP + EA+ L+ LL D + RL G+ +E
Sbjct: 206 RLPFYNQDHEKLFELILMEE--IRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE 261
Query: 398 LKEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEK 434
+ +H +F GI W +YE + +KP V E DT+ F++
Sbjct: 262 IMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 300
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 194 bits (494), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 180/339 (53%), Gaps = 48/339 (14%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
++ +++FE L L+GKG FG+V L + K TG +AMK LKK ++ + +V H +E +L
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 65
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ L YSFQ D L +MEY GG++ L RE + SED ARFY AE V A+
Sbjct: 66 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 222 IH-QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H + N V+RD+K +NL+LDK+GH+K++DFGLCK E I + T+
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------------EGIKDGATMK--- 169
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
GT +Y+APEVL YG DWW LG +MYEM+ G
Sbjct: 170 ----------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 207
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVEE 397
PF + D I+ + ++FP + EA+ L+ LL D + RL G+ +E
Sbjct: 208 RLPFYNQDHEKLFELILMEE--IRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE 263
Query: 398 LKEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEK 434
+ +H +F GI W +YE + +KP V E DT+ F++
Sbjct: 264 IMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 302
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 194 bits (493), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 123/339 (36%), Positives = 180/339 (53%), Gaps = 48/339 (14%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
++ +++FE L L+GKG FG+V L + K TG +AMK LKK ++ + +V H +E +L
Sbjct: 5 RVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQ 64
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ L YSFQ D L +MEY GG++ L RE + SED ARFY AE V A+
Sbjct: 65 NSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 222 IH-QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H + N V+RD+K +NL+LDK+GH+K++DFGLCK E I + T+
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK-------------EGIKDGATMK--- 168
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
GT +Y+APEVL YG DWW LG +MYEM+ G
Sbjct: 169 ----------------------XFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 206
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVEE 397
PF + D I+ + ++FP + EA+ L+ LL D + RL G+ +E
Sbjct: 207 RLPFYNQDHEKLFELILMEE--IRFPR--TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKE 262
Query: 398 LKEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFEK 434
+ +H +F GI W +YE + +KP V E DT+ F++
Sbjct: 263 IMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 301
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 187/338 (55%), Gaps = 53/338 (15%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG----EIFAMKKLKKSEMLKRG 148
T +++ K FE L ++G+G+FG+V L + K +G +++AMK LKK+ + R
Sbjct: 12 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 70
Query: 149 QVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVA 208
+V + ER++L EV+ IV+L Y+FQ LYLI+++L GGD+ T L +E + +E+
Sbjct: 71 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 129
Query: 209 RFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDE 268
+FY+AE LA+ +H ++RD+KP+N++LD+ GH+KL+DFGL
Sbjct: 130 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS--------------- 174
Query: 269 DIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWW 328
KE + K+ AYS GT++YMAPEV+ ++G+ DWW
Sbjct: 175 ------------------KESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSADWW 211
Query: 329 SLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVE 387
S G +M+EML G PF D + T I+ K L P+ +S EA+ L+ L +
Sbjct: 212 SFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQF--LSPEAQSLLRMLFKRNPA 267
Query: 388 TRLGTR--GVEELKEHPWFRGIQWDKLY--EMEAAYKP 421
RLG GVEE+K H +F I W+KLY E+ +KP
Sbjct: 268 NRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 305
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 178/337 (52%), Gaps = 47/337 (13%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
K+ ++DF+ L L+GKG FG+V L R K TG +AMK L+K ++ + +V H +E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ L Y+FQ D L +MEY GG++ L RE + +E+ ARFY AE V A+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H + V+RDIK +NL+LDK+GH+K++DFGLCK E +S+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------------------EGISDG-- 159
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
A + GT +Y+APEVL YG DWW LG +MYEM+ G
Sbjct: 160 -----------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVEEL 398
PF + D I+ + ++FP +S EA+ L+ LL D + RL G +E+
Sbjct: 203 LPFYNQDHERLFELILMEE--IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 399 KEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFE 433
EH +F I W + + + +KP V E+DT+ F+
Sbjct: 259 MEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 122/338 (36%), Positives = 187/338 (55%), Gaps = 53/338 (15%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG----EIFAMKKLKKSEMLKRG 148
T +++ K FE L ++G+G+FG+V L + K +G +++AMK LKK+ + R
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVK-KISGSDARQLYAMKVLKKATLKVRD 69
Query: 149 QVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVA 208
+V + ER++L EV+ IV+L Y+FQ LYLI+++L GGD+ T L +E + +E+
Sbjct: 70 RVR-TKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDV 128
Query: 209 RFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDE 268
+FY+AE LA+ +H ++RD+KP+N++LD+ GH+KL+DFGL
Sbjct: 129 KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS--------------- 173
Query: 269 DIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWW 328
KE + K+ AYS GT++YMAPEV+ ++G+ DWW
Sbjct: 174 ------------------KESIDHEKK-----AYSFCGTVEYMAPEVVNRRGHTQSADWW 210
Query: 329 SLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVE 387
S G +M+EML G PF D + T I+ K L P+ +S EA+ L+ L +
Sbjct: 211 SFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMPQF--LSPEAQSLLRMLFKRNPA 266
Query: 388 TRLGTR--GVEELKEHPWFRGIQWDKLY--EMEAAYKP 421
RLG GVEE+K H +F I W+KLY E+ +KP
Sbjct: 267 NRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 192 bits (489), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 178/337 (52%), Gaps = 47/337 (13%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
K+ ++DF+ L L+GKG FG+V L R K TG +AMK L+K ++ + +V H +E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ L Y+FQ D L +MEY GG++ L RE + +E+ ARFY AE V A+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H + V+RDIK +NL+LDK+GH+K++DFGLCK E +S+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------------------EGISDG-- 159
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
A + GT +Y+APEVL YG DWW LG +MYEM+ G
Sbjct: 160 -----------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVEEL 398
PF + D I+ + ++FP +S EA+ L+ LL D + RL G +E+
Sbjct: 203 LPFYNQDHERLFELILMEE--IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 399 KEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFE 433
EH +F I W + + + +KP V E+DT+ F+
Sbjct: 259 MEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 177/337 (52%), Gaps = 47/337 (13%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
K+ ++DF+ L L+GKG FG+V L R K TG +AMK L+K ++ + +V H +E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ L Y+FQ D L +MEY GG++ L RE + +E+ ARFY AE V A+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H + V+RDIK +NL+LDK+GH+K++DFGLCK E +S+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------------------EGISDG-- 159
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
A GT +Y+APEVL YG DWW LG +MYEM+ G
Sbjct: 160 -----------------ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVEEL 398
PF + D I+ + ++FP +S EA+ L+ LL D + RL G +E+
Sbjct: 203 LPFYNQDHERLFELILMEE--IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 399 KEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFE 433
EH +F I W + + + +KP V E+DT+ F+
Sbjct: 259 MEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 192 bits (488), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 177/337 (52%), Gaps = 47/337 (13%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
K+ ++DF+ L L+GKG FG+V L R K TG +AMK L+K ++ + +V H +E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ L Y+FQ D L +MEY GG++ L RE + +E+ ARFY AE V A+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H + V+RDIK +NL+LDK+GH+K++DFGLCK E +S+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------------------EGISDG-- 159
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
A GT +Y+APEVL YG DWW LG +MYEM+ G
Sbjct: 160 -----------------ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVEEL 398
PF + D I+ + ++FP +S EA+ L+ LL D + RL G +E+
Sbjct: 203 LPFYNQDHERLFELILMEE--IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 399 KEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFE 433
EH +F I W + + + +KP V E+DT+ F+
Sbjct: 259 MEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 177/337 (52%), Gaps = 47/337 (13%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
K+ ++DF+ L L+GKG FG+V L R K TG +AMK L+K ++ + +V H +E +L
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 65
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ L Y+FQ D L +MEY GG++ L RE + +E+ ARFY AE V A+
Sbjct: 66 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H + V+RDIK +NL+LDK+GH+K++DFGLCK E +S+
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------------------EGISDG-- 164
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
A GT +Y+APEVL YG DWW LG +MYEM+ G
Sbjct: 165 -----------------ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVEEL 398
PF + D I+ + ++FP +S EA+ L+ LL D + RL G +E+
Sbjct: 208 LPFYNQDHERLFELILMEE--IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 263
Query: 399 KEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFE 433
EH +F I W + + + +KP V E+DT+ F+
Sbjct: 264 MEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 300
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 192 bits (487), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/337 (35%), Positives = 177/337 (52%), Gaps = 47/337 (13%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
K+ ++DF+ L L+GKG FG+V L R K TG +AMK L+K ++ + +V H +E +L
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQ 60
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ L Y+FQ D L +MEY GG++ L RE + +E+ ARFY AE V A+
Sbjct: 61 NTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H + V+RDIK +NL+LDK+GH+K++DFGLCK E +S+
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK-------------------EGISDG-- 159
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
A GT +Y+APEVL YG DWW LG +MYEM+ G
Sbjct: 160 -----------------ATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRL--GTRGVEEL 398
PF + D I+ + ++FP +S EA+ L+ LL D + RL G +E+
Sbjct: 203 LPFYNQDHERLFELILMEE--IRFPR--TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEV 258
Query: 399 KEHPWFRGIQWDKLYE--MEAAYKPTVNGELDTQNFE 433
EH +F I W + + + +KP V E+DT+ F+
Sbjct: 259 MEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFD 295
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 187 bits (475), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 115/338 (34%), Positives = 174/338 (51%), Gaps = 50/338 (14%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
K+ I+DFE ++GKG+FG+V L K T + FA+K LKK +L VE E+ +L+
Sbjct: 14 KLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 73
Query: 162 EV-DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+ + +F +FQ + L+ +MEYL GGD+M + A FY AE +L +
Sbjct: 74 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 133
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H V+RD+K DN++LDK+GH+K++DFG+CK E+++ +E
Sbjct: 134 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK-------------ENMLGDAKTNE-- 178
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
GT DY+APE+LL + Y DWWS G ++YEMLIG
Sbjct: 179 -----------------------FCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 215
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPK-ISDEARDLICHLLC-DVETRLGTRGVEEL 398
PF D I + P P+ + EA+DL+ L + E RLG RG ++
Sbjct: 216 QSPFHGQDEEELFHSIR-----MDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG--DI 268
Query: 399 KEHPWFRGIQWDKL--YEMEAAYKPTVNGELDTQNFEK 434
++HP FR I W++L E++ ++P V D NF+K
Sbjct: 269 RQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK 306
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 182 bits (462), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/338 (33%), Positives = 172/338 (50%), Gaps = 50/338 (14%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
K+ I+DF ++GKG+FG+V L K T + FA+K LKK +L VE E+ +L+
Sbjct: 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLS 72
Query: 162 EV-DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+ + +F +FQ + L+ +MEYL GGD+M + A FY AE +L +
Sbjct: 73 LAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQ 132
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H V+RD+K DN++LDK+GH+K++DFG+CK E+++ +
Sbjct: 133 FLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK-------------ENMLGDAKTN--- 176
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
GT DY+APE+LL + Y DWWS G ++YEMLIG
Sbjct: 177 ----------------------XFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPK-ISDEARDLICHLLC-DVETRLGTRGVEEL 398
PF D I + P P+ + EA+DL+ L + E RLG RG ++
Sbjct: 215 QSPFHGQDEEELFHSIR-----MDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRG--DI 267
Query: 399 KEHPWFRGIQWDKL--YEMEAAYKPTVNGELDTQNFEK 434
++HP FR I W++L E++ ++P V D NF+K
Sbjct: 268 RQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDK 305
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 178 bits (451), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 111/339 (32%), Positives = 181/339 (53%), Gaps = 49/339 (14%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
++GID+FE + ++GKG+FG+V L R K TG+++A+K LKK +L+ VE +E+ +L+
Sbjct: 19 RLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILS 78
Query: 162 EV-DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+ + QLF FQ D L+ +ME++ GGD+M + + E ARFY AE + A+
Sbjct: 79 LARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALM 138
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H ++RD+K DN++LD GH KL+DFG+CK E I N T +
Sbjct: 139 FLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK-------------EGICNGVTTA--- 182
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
+ GT DY+APE+L + YG DWW++G ++YEML G
Sbjct: 183 ----------------------TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET-RLG--TRGVEE 397
+ PF +++ I+N + +P + ++A ++ + T RLG T+G E
Sbjct: 221 HAPFEAENEDDLFEAILNDEVV--YPT--WLHEDATGILKSFMTKNPTMRLGSLTQGGEH 276
Query: 398 -LKEHPWFRGIQWDKLY--EMEAAYKPTVNGELDTQNFE 433
+ HP+F+ I W +L ++E ++P + D NF+
Sbjct: 277 AILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFD 315
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 174 bits (440), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/340 (32%), Positives = 176/340 (51%), Gaps = 49/340 (14%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLA 161
++ + DF L ++GKG+FG+V L K T E++A+K LKK +++ VE E+ +LA
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLA 74
Query: 162 EVDSR-CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+D + QL FQ D LY +MEY+ GGD+M + + E A FY AE + +
Sbjct: 75 LLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLF 134
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H+ ++RD+K DN++LD GH+K++DFG+CK E +++ T E
Sbjct: 135 FLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK-------------EHMMDGVTTRE-- 179
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
GT DY+APE++ + YG DWW+ G ++YEML G
Sbjct: 180 -----------------------FCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 216
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETR---LGTRGVEE 397
PPF +D + I+ + +P+ +S EA + L+ + G G +
Sbjct: 217 QPPFDGEDEDELFQSIMEHN--VSYPKS--LSKEAVSICKGLMTKHPAKRLGCGPEGERD 272
Query: 398 LKEHPWFRGIQWDKL--YEMEAAYKPTVNGELDTQNFEKF 435
++EH +FR I W+KL E++ +KP V G+ +NF+KF
Sbjct: 273 VREHAFFRRIDWEKLENREIQPPFKPKVCGK-GAENFDKF 311
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/344 (30%), Positives = 177/344 (51%), Gaps = 52/344 (15%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+G+ DF+ L +IG+G++ +V L R K T I+AM+ +KK + ++ V++E+++ +
Sbjct: 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 163 VDSR-CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ +V L FQ L+ ++EY+ GGD+M + R+ L E+ ARFY AE LA++
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H+ ++RD+K DN++LD GH+KL+D+G+CK E + +T S
Sbjct: 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-------------EGLRPGDTTS---- 211
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+ GT +Y+APE+L + YG DWW+LG +M+EM+ G
Sbjct: 212 ---------------------TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
Query: 342 PPF----CSDDPRITCRKI---VNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTR- 393
PF SD+P V + ++ P + A L L D + RLG
Sbjct: 251 SPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK-AASVLKSFLNKDPKERLGCHP 309
Query: 394 --GVEELKEHPWFRGIQWDKLYEMEAA--YKPTVNGELDTQNFE 433
G +++ HP+FR + WD + + + +KP ++GE NF+
Sbjct: 310 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 353
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 172 bits (436), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 177/344 (51%), Gaps = 52/344 (15%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+G+ DF+ L +IG+G++ +V L R K T I+AMK +KK + ++ V++E+++ +
Sbjct: 17 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 76
Query: 163 VDSR-CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ +V L FQ L+ ++EY+ GGD+M + R+ L E+ ARFY AE LA++
Sbjct: 77 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 136
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H+ ++RD+K DN++LD GH+KL+D+G+CK EG
Sbjct: 137 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-------------------------EG 171
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+ P + + GT +Y+APE+L + YG DWW+LG +M+EM+ G
Sbjct: 172 --LRPGDTTSXF-----------CGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
Query: 342 PPF----CSDDPRITCRKI---VNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT-- 392
PF SD+P V + ++ P + A L L D + RLG
Sbjct: 219 SPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSMSVK-AASVLKSFLNKDPKERLGCLP 277
Query: 393 -RGVEELKEHPWFRGIQWDKLYEMEAA--YKPTVNGELDTQNFE 433
G +++ HP+FR + WD + + + +KP ++GE NF+
Sbjct: 278 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 321
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 172 bits (435), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 176/344 (51%), Gaps = 52/344 (15%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+G+ DF+ L +IG+G++ +V L R K T I+AMK +KK + ++ V++E+++ +
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 61
Query: 163 VDSR-CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ +V L FQ L+ ++EY+ GGD+M + R+ L E+ ARFY AE LA++
Sbjct: 62 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 121
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H+ ++RD+K DN++LD GH+KL+D+G+CK E + +T S
Sbjct: 122 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-------------EGLRPGDTTS---- 164
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
GT +Y+APE+L + YG DWW+LG +M+EM+ G
Sbjct: 165 ---------------------XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
Query: 342 PPF----CSDDPRITCRKI---VNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTR- 393
PF SD+P V + ++ P + A L L D + RLG
Sbjct: 204 SPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK-AASVLKSFLNKDPKERLGCHP 262
Query: 394 --GVEELKEHPWFRGIQWDKLYEMEAA--YKPTVNGELDTQNFE 433
G +++ HP+FR + WD + + + +KP ++GE NF+
Sbjct: 263 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 306
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 171 bits (434), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 106/344 (30%), Positives = 176/344 (51%), Gaps = 52/344 (15%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+G+ DF+ L +IG+G++ +V L R K T I+AMK +KK + ++ V++E+++ +
Sbjct: 6 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQ 65
Query: 163 VDSR-CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
+ +V L FQ L+ ++EY+ GGD+M + R+ L E+ ARFY AE LA++
Sbjct: 66 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 125
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H+ ++RD+K DN++LD GH+KL+D+G+CK E + +T S
Sbjct: 126 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK-------------EGLRPGDTTS---- 168
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
GT +Y+APE+L + YG DWW+LG +M+EM+ G
Sbjct: 169 ---------------------XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
Query: 342 PPF----CSDDPRITCRKI---VNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTR- 393
PF SD+P V + ++ P + A L L D + RLG
Sbjct: 208 SPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSVK-AASVLKSFLNKDPKERLGCHP 266
Query: 394 --GVEELKEHPWFRGIQWDKLYEMEAA--YKPTVNGELDTQNFE 433
G +++ HP+FR + WD + + + +KP ++GE NF+
Sbjct: 267 QTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 310
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 169 bits (428), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 119/383 (31%), Positives = 190/383 (49%), Gaps = 54/383 (14%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
R ++ + DF L ++GKG+FG+V L K T E++A+K LKK +++ VE E+
Sbjct: 334 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 393
Query: 159 LLA-EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
+LA + QL FQ D LY +MEY+ GGD+M + + E A FY AE +
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI 453
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+ + ++RD+K DN++LD GH+K++DFG+CK E+I + T
Sbjct: 454 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK-------------ENIWDGVTTK 500
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
GT DY+APE++ + YG DWW+ G ++YEM
Sbjct: 501 -------------------------XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 535
Query: 338 LIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETR---LGTRG 394
L G PF +D + I+ + +P+ +S EA + L+ + G G
Sbjct: 536 LAGQAPFEGEDEDELFQSIMEHN--VAYPKS--MSKEAVAICKGLMTKHPGKRLGCGPEG 591
Query: 395 VEELKEHPWFRGIQWDKL--YEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPWR 452
++KEH +FR I W+KL E++ YKP +G + +NF++F PP P P +
Sbjct: 592 ERDIKEHAFFRYIDWEKLERKEIQPPYKPKASGR-NAENFDRF-FTRHPPVLXP---PDQ 646
Query: 453 KMLTSKD-TNFIGYTFKKSDVLK 474
+++ + D + F G+ F S+ LK
Sbjct: 647 EVIRNIDQSEFEGFXFVNSEFLK 669
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 121/384 (31%), Positives = 185/384 (48%), Gaps = 56/384 (14%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
R ++ + DF L ++GKG+FG+V L K T E++A+K LKK +++ VE E+
Sbjct: 13 NRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKR 72
Query: 159 LLA-EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
+LA + QL FQ D LY +MEY+ GGD+M + + E A FY AE +
Sbjct: 73 VLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAI 132
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+ + ++RD+K DN++LD GH+K++DFG+CK E+I + T
Sbjct: 133 GLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK-------------ENIWDGVTTK 179
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
GT DY+APE++ + YG DWW+ G ++YEM
Sbjct: 180 -------------------------XFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 214
Query: 338 LIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET--RLGT--R 393
L G PF +D + I+ PK + IC L RLG
Sbjct: 215 LAGQAPFEGEDEDELFQSIMEHNVAY-----PKSMSKEAVAICKGLMTKHPGKRLGCGPE 269
Query: 394 GVEELKEHPWFRGIQWDKL--YEMEAAYKPTVNGELDTQNFEKFPEVDGPPSEIPSVGPW 451
G ++KEH +FR I W+KL E++ YKP G + +NF++F PP P P
Sbjct: 270 GERDIKEHAFFRYIDWEKLERKEIQPPYKPKACGR-NAENFDRF-FTRHPPVLXP---PD 324
Query: 452 RKMLTSKD-TNFIGYTFKKSDVLK 474
++++ + D + F G+ F S+ LK
Sbjct: 325 QEVIRNIDQSEFEGFXFVNSEFLK 348
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 164 bits (416), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 166/320 (51%), Gaps = 44/320 (13%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
Q RK +DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER+
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 62
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+++ +D V+L+++FQD + LY + Y G+++ + + E RFY AE V A
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 122
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ +H +HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 123 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------------------- 163
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+++A A VGT Y++PE+L +K D W+LG I+Y+++
Sbjct: 164 -----------------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 206
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRG 394
G PPF + + + +KI+ K FPE K +ARDL+ LL D RLG G
Sbjct: 207 AGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEG 262
Query: 395 VEELKEHPWFRGIQWDKLYE 414
LK HP+F + W+ L++
Sbjct: 263 YGPLKAHPFFESVTWENLHQ 282
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 164 bits (416), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 164/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 186
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A S VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 187 ----------SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 236
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 237 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 292
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 293 PFFESVTWENLHQ 305
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 166/320 (51%), Gaps = 44/320 (13%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
Q RK +DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER+
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 61
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+++ +D V+L+++FQD + LY + Y G+++ + + E RFY AE V A
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 121
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ +H +HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 122 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------------------- 162
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+++A A VGT Y++PE+L +K D W+LG I+Y+++
Sbjct: 163 -----------------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 205
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRG 394
G PPF + + + +KI+ K FPE K +ARDL+ LL D RLG G
Sbjct: 206 AGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEG 261
Query: 395 VEELKEHPWFRGIQWDKLYE 414
LK HP+F + W+ L++
Sbjct: 262 YGPLKAHPFFESVTWENLHQ 281
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 166/320 (51%), Gaps = 44/320 (13%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
Q RK +DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER+
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERD 60
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+++ +D V+L+++FQD + LY + Y G+++ + + E RFY AE V A
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSA 120
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ +H +HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 121 LEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE------------------- 161
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+++A A VGT Y++PE+L +K D W+LG I+Y+++
Sbjct: 162 -----------------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLV 204
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRG 394
G PPF + + + +KI+ K FPE K +ARDL+ LL D RLG G
Sbjct: 205 AGLPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEG 260
Query: 395 VEELKEHPWFRGIQWDKLYE 414
LK HP+F + W+ L++
Sbjct: 261 YGPLKAHPFFESVTWENLHQ 280
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 164 bits (415), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 164/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 182
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A S VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 183 ----------SKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 232
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 233 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 288
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 289 PFFESVTWENLHQ 301
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 164 bits (414), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/313 (30%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G ++ + + E RFY AE V A+ +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 185
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A S VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 186 ----------SKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFR 235
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 236 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 292 PFFESVTWENLHQ 304
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 164/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 183
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A + VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 184 ----------SKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 234 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 289
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 290 PFFESVTWENLHQ 302
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 163 bits (412), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 165/318 (51%), Gaps = 44/318 (13%)
Query: 101 RKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLL 160
RK +DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER+++
Sbjct: 2 RKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVM 61
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+ +D V+L+++FQD + LY + Y G+++ + + E RFY AE V A+
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALE 121
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H +HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 122 YLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE--------------------- 160
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G
Sbjct: 161 ---------------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVE 396
PPF + + + +KI+ K FPE K +ARDL+ LL D RLG G
Sbjct: 206 LPPFRAGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYG 261
Query: 397 ELKEHPWFRGIQWDKLYE 414
LK HP+F + W+ L++
Sbjct: 262 PLKAHPFFESVTWENLHQ 279
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 162/313 (51%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 185
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 186 ----------SKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFR 235
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 236 AGNEGLIFAKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 292 PFFESVTWENLHQ 304
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 162 bits (411), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 152
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 153 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 186
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 187 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 236
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 237 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 292
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 293 PFFESVTWENLHQ 305
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 185
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 186 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 236 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 292 PFFESVTWENLHQ 304
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 162 bits (411), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 127/445 (28%), Positives = 208/445 (46%), Gaps = 74/445 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
L+R+ + + F Q ++GKG FGEV C+ + TG+++A KKL+K + KR +E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAES 215
+L +V+SR +V L Y+++ D L L++ + GGD+ + M + E A FY AE
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ +H+ V+RD+KP+N++LD +GH+++SD GL
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL----------------------A 333
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
V EGQ + + VGT+ YMAPEV+ + Y DWW+LG ++Y
Sbjct: 334 VHVPEGQTIKGR-----------------VGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGT 392
EM+ G PF +I ++ + + PEE + S +AR L LLC D RLG
Sbjct: 377 EMIAGQSPFQQRKKKIKREEVE--RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGC 434
Query: 393 RG--VEELKEHPWFRGIQWDKLYE--MEAAYKPTVNG-----ELDTQNFEKFPEVDGPPS 443
RG E+KEHP F+ + + +L +E +KP LD + F V+ P+
Sbjct: 435 RGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKGVELEPT 494
Query: 444 E-----------IPSVGPWRKMLTSKDTNFIGYTFKKSDVLKSLENSGTDMRSNGSSKVP 492
+ +P PW+ + + F++ +V + D+ G P
Sbjct: 495 DQDFYQKFATGSVPI--PWQNEMVETE------CFQELNVFGLDGSVPPDLDWKGQPPAP 546
Query: 493 SLISLLGRIDVQETAISECDQQKQE 517
LL R+ ++ C ++E
Sbjct: 547 PKKGLLQRLFSRQDCCGNCSDSEEE 571
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 185
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 186 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 236 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 292 PFFESVTWENLHQ 304
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 183
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 184 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 234 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 289
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 290 PFFESVTWENLHQ 302
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 185
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 186 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 236 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 292 PFFESVTWENLHQ 304
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 162 bits (410), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 183
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 184 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 234 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 289
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 290 PFFESVTWENLHQ 302
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 148
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 149 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 182
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 183 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 232
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 233 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 288
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 289 PFFESVTWENLHQ 301
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 162 bits (409), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 114/354 (32%), Positives = 179/354 (50%), Gaps = 52/354 (14%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
L+R+ + + F Q ++GKG FGEV C+ + TG+++A KKL+K + KR +E+
Sbjct: 176 LERQPVTKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEK 235
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAES 215
+L +V+SR +V L Y+++ D L L++ + GGD+ + M + E A FY AE
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEI 295
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ +H+ V+RD+KP+N++LD +GH+++SD GL
Sbjct: 296 CCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGL----------------------A 333
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
V EGQ + + VGT+ YMAPEV+ + Y DWW+LG ++Y
Sbjct: 334 VHVPEGQTIKGR-----------------VGTVGYMAPEVVKNERYTFSPDWWALGCLLY 376
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGT 392
EM+ G PF +I ++ + + PEE + S +AR L LLC D RLG
Sbjct: 377 EMIAGQSPFQQRKKKIKREEVE--RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGC 434
Query: 393 RG--VEELKEHPWFRGIQWDKLYE--MEAAYKPTVNGEL--DTQNFEKFPEVDG 440
RG E+KEHP F+ + + +L +E +KP D + E+F V G
Sbjct: 435 RGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCKDVLDIEQFSTVKG 488
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 162 bits (409), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 163/313 (52%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 133
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 134 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 167
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 168 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 217
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 218 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 273
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 274 PFFESVTWENLHQ 286
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 161 bits (408), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 162/313 (51%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 151
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 152 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 185
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 186 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLGT---RGVEELKEH 401
+ + + KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 236 AGNEGLIFAKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 292 PFFESVTWENLHQ 304
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 161 bits (407), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 162/313 (51%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L++ FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 156
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 190
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 191 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 240
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLGT---RGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 241 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 296
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 297 PFFESVTWENLHQ 309
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 160 bits (406), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/313 (30%), Positives = 162/313 (51%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 149
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 150 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 183
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 184 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FPE K +ARDL+ LL D RLG G LK H
Sbjct: 234 AGNEYLIFQKII--KLEYDFPE--KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 289
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 290 PFFESVTWENLHQ 302
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 158 bits (400), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 161/313 (51%), Gaps = 44/313 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+DF+ ++G+G+F V L R T +A+K L+K ++K +V +V ER++++ +D
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
V+L+++FQD + LY + Y G+++ + + E RFY AE V A+ +H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK 154
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRD+KP+N++L+++ H++++DFG K L +
Sbjct: 155 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPE-------------------------- 188
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+++A A VGT Y++PE+L +K D W+LG I+Y+++ G PPF
Sbjct: 189 ----------SKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 238
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLG---TRGVEELKEH 401
+ + + +KI+ K FP +ARDL+ LL D RLG G LK H
Sbjct: 239 AGNEYLIFQKII--KLEYDFPA--AFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 294
Query: 402 PWFRGIQWDKLYE 414
P+F + W+ L++
Sbjct: 295 PFFESVTWENLHQ 307
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 152/315 (48%), Gaps = 48/315 (15%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH 152
T + +RK IDDF+ + +GKG FG V L R K I A+K L KS++ K G
Sbjct: 1 TALAEMPKRKFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 153 VRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
+R E + + + I++++ F D +YL++E+ P G++ L + E + ++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
E A+H H+ +HRDIKP+NL++ G LK++DFG
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------------- 159
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGA 332
W + L+ RR + GTLDY+ PE++ K + + D W G
Sbjct: 160 ----------WSVHAPSLR-----RRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGV 200
Query: 333 IMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLG 391
+ YE L+G PPF S T R+IVN LKFP P +SD ++DLI LL RL
Sbjct: 201 LCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFP--PFLSDGSKDLISKLLRYHPPQRLP 256
Query: 392 TRGVEELKEHPWFRG 406
+GV EHPW +
Sbjct: 257 LKGV---MEHPWVKA 268
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 161/320 (50%), Gaps = 52/320 (16%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM-LKRGQVEHVRSERNLLA 161
+ ++DF +IG+G FGEV CR TG+++AMK L K + +K+G+ + +ER +L+
Sbjct: 185 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-NERIMLS 243
Query: 162 EV---DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
V D IV + Y+F D L I++ + GGD+ L + + SE RFY AE +L
Sbjct: 244 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 303
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ +H V+RD+KP N++LD++GH+++SD GL K
Sbjct: 304 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------------------ 345
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKK-GYGMECDWWSLGAIMYEM 337
+++VGT YMAPEVL K Y DW+SLG +++++
Sbjct: 346 ----------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 383
Query: 338 LIGYPPFCSDDPRITCRKIVNWKTCLKFPEEP-KISDEARDLICHLLC-DVETRLGT--R 393
L G+ PF + + ++ T E P S E R L+ LL DV RLG R
Sbjct: 384 LRGHSPF--RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGR 441
Query: 394 GVEELKEHPWFRGIQWDKLY 413
G +E+KE P+FR + W ++
Sbjct: 442 GAQEVKESPFFRSLDWQMVF 461
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 161/320 (50%), Gaps = 52/320 (16%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM-LKRGQVEHVRSERNLLA 161
+ ++DF +IG+G FGEV CR TG+++AMK L K + +K+G+ + +ER +L+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-NERIMLS 244
Query: 162 EV---DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
V D IV + Y+F D L I++ + GGD+ L + + SE RFY AE +L
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ +H V+RD+KP N++LD++GH+++SD GL K
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------------------ 346
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKK-GYGMECDWWSLGAIMYEM 337
+++VGT YMAPEVL K Y DW+SLG +++++
Sbjct: 347 ----------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
Query: 338 LIGYPPFCSDDPRITCRKIVNWKTCLKFPEEP-KISDEARDLICHLLC-DVETRLGT--R 393
L G+ PF + + ++ T E P S E R L+ LL DV RLG R
Sbjct: 385 LRGHSPF--RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGR 442
Query: 394 GVEELKEHPWFRGIQWDKLY 413
G +E+KE P+FR + W ++
Sbjct: 443 GAQEVKESPFFRSLDWQMVF 462
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 161/320 (50%), Gaps = 52/320 (16%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM-LKRGQVEHVRSERNLLA 161
+ ++DF +IG+G FGEV CR TG+++AMK L K + +K+G+ + +ER +L+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-NERIMLS 244
Query: 162 EV---DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
V D IV + Y+F D L I++ + GGD+ L + + SE RFY AE +L
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ +H V+RD+KP N++LD++GH+++SD GL K
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------------------ 346
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKK-GYGMECDWWSLGAIMYEM 337
+++VGT YMAPEVL K Y DW+SLG +++++
Sbjct: 347 ----------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
Query: 338 LIGYPPFCSDDPRITCRKIVNWKTCLKFPEEP-KISDEARDLICHLLC-DVETRLGT--R 393
L G+ PF + + ++ T E P S E R L+ LL DV RLG R
Sbjct: 385 LRGHSPF--RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGR 442
Query: 394 GVEELKEHPWFRGIQWDKLY 413
G +E+KE P+FR + W ++
Sbjct: 443 GAQEVKESPFFRSLDWQMVF 462
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 149 bits (376), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 104/320 (32%), Positives = 161/320 (50%), Gaps = 52/320 (16%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM-LKRGQVEHVRSERNLLA 161
+ ++DF +IG+G FGEV CR TG+++AMK L K + +K+G+ + +ER +L+
Sbjct: 186 LTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLAL-NERIMLS 244
Query: 162 EV---DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
V D IV + Y+F D L I++ + GGD+ L + + SE RFY AE +L
Sbjct: 245 LVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILG 304
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ +H V+RD+KP N++LD++GH+++SD GL K
Sbjct: 305 LEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK------------------ 346
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKK-GYGMECDWWSLGAIMYEM 337
+++VGT YMAPEVL K Y DW+SLG +++++
Sbjct: 347 ----------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384
Query: 338 LIGYPPFCSDDPRITCRKIVNWKTCLKFPEEP-KISDEARDLICHLLC-DVETRLGT--R 393
L G+ PF + + ++ T E P S E R L+ LL DV RLG R
Sbjct: 385 LRGHSPF--RQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGR 442
Query: 394 GVEELKEHPWFRGIQWDKLY 413
G +E+KE P+FR + W ++
Sbjct: 443 GAQEVKESPFFRSLDWQMVF 462
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 151/315 (47%), Gaps = 48/315 (15%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH 152
T + +RK IDDF+ +GKG FG V L R K I A+K L KS++ K G
Sbjct: 2 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 61
Query: 153 VRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
+R E + + + I++++ F D +YL++E+ P G++ L + E + ++
Sbjct: 62 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 121
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
E A+H H+ +HRDIKP+NL++ G LK++DFG
Sbjct: 122 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------------- 160
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGA 332
W + L+ RR + GTLDY+ PE++ K + + D W G
Sbjct: 161 ----------WSVHAPSLR-----RRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGV 201
Query: 333 IMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLG 391
+ YE L+G PPF S T R+IVN LKFP P +SD ++DLI LL RL
Sbjct: 202 LCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFP--PFLSDGSKDLISKLLRYHPPQRLP 257
Query: 392 TRGVEELKEHPWFRG 406
+GV EHPW +
Sbjct: 258 LKGV---MEHPWVKA 269
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 148 bits (373), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 102/315 (32%), Positives = 151/315 (47%), Gaps = 48/315 (15%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH 152
T + +RK IDDF+ +GKG FG V L R K I A+K L KS++ K G
Sbjct: 1 TALAEMPKRKFTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQ 60
Query: 153 VRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
+R E + + + I++++ F D +YL++E+ P G++ L + E + ++
Sbjct: 61 LRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM 120
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
E A+H H+ +HRDIKP+NL++ G LK++DFG
Sbjct: 121 EELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------------- 159
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGA 332
W + L+ RR + GTLDY+ PE++ K + + D W G
Sbjct: 160 ----------WSVHAPSLR-----RRXMC----GTLDYLPPEMIEGKTHDEKVDLWCAGV 200
Query: 333 IMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLG 391
+ YE L+G PPF S T R+IVN LKFP P +SD ++DLI LL RL
Sbjct: 201 LCYEFLVGMPPFDSPSHTETHRRIVN--VDLKFP--PFLSDGSKDLISKLLRYHPPQRLP 256
Query: 392 TRGVEELKEHPWFRG 406
+GV EHPW +
Sbjct: 257 LKGV---MEHPWVKA 268
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 139 bits (349), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 87/318 (27%), Positives = 156/318 (49%), Gaps = 50/318 (15%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+ D FE L IGKG+FG+V + + T +++AMK + K + ++R +V +V E ++
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQG 71
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V L+YSFQD + ++++++ L GGD+ L + E+ + +I E V+A+ +
Sbjct: 72 LEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
+HRD+KPDN++LD++GH+ ++DF +
Sbjct: 132 QNQRIIHRDMKPDNILLDEHGHVHITDFNIAA---------------------------- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKK---GYGMECDWWSLGAIMYEMLI 339
M+P+E + GT YMAPE+ + GY DWWSLG YE+L
Sbjct: 164 -MLPRE----------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR 212
Query: 340 GYPPFCSDDPRITCRKIVNW--KTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVE 396
G P+ + ++IV+ T + +P S E L+ LL + + R +
Sbjct: 213 GRRPYHIRS-STSSKEIVHTFETTVVTYPS--AWSQEMVSLLKKLLEPNPDQRFSQ--LS 267
Query: 397 ELKEHPWFRGIQWDKLYE 414
+++ P+ I WD +++
Sbjct: 268 DVQNFPYMNDINWDAVFQ 285
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 149/308 (48%), Gaps = 46/308 (14%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M ++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
E + + + I++L+ F D+ +YLI+EY P G++ L + E YI E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
A+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
W + +RR + GTLDY+ PE++ + + + D WSLG + Y
Sbjct: 159 -------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 202
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGV 395
E L+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ +
Sbjct: 203 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--L 256
Query: 396 EELKEHPW 403
E+ EHPW
Sbjct: 257 REVLEHPW 264
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 88/281 (31%), Positives = 144/281 (51%), Gaps = 45/281 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I+DF+ L+GKG+F V + TG A+K + K M K G V+ V++E + ++
Sbjct: 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLK 69
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHSIH 223
I++L+ F+DS+++YL++E G++ L R SE+ AR ++ + + + +H
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH 129
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
H +HRD+ NL+L +N ++K++DFGL L+
Sbjct: 130 SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLK-------------------------- 163
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPP 343
MP E+ Y+ GT +Y++PE+ + +G+E D WSLG + Y +LIG PP
Sbjct: 164 -MPHEK-----------HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPP 211
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPK-ISDEARDLICHLL 383
F +D + T K+V L E P +S EA+DLI LL
Sbjct: 212 FDTDTVKNTLNKVV-----LADYEMPSFLSIEAKDLIHQLL 247
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 155/327 (47%), Gaps = 51/327 (15%)
Query: 78 NEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMK 137
N +EE+ + E+ ++R+ ++DFE +GKG FG V L R K + I A+K
Sbjct: 11 NNPEEELASKQKNEES-----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK 65
Query: 138 KLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL 197
L K+++ K G +R E + + + I++L+ F D+ +YLI+EY P G + L
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 125
Query: 198 MREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLE 257
+ E YI E A+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 126 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------ 179
Query: 258 DKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL 317
W + +RR + GTLDY+ PE++
Sbjct: 180 -------------------------WSV------HAPSSRRT---TLCGTLDYLPPEMIE 205
Query: 318 KKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARD 377
+ + + D WSLG + YE L+G PPF ++ + T ++I + FP+ +++ ARD
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARD 261
Query: 378 LICHLLCDVETRLGTRGVEELKEHPWF 404
LI LL ++ + E+ EHPW
Sbjct: 262 LISRLLKHNPSQRPM--LREVLEHPWI 286
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/304 (31%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
+ + I++L+ F DS +YLI+EY P G + L + E YI E A+
Sbjct: 62 QSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H +HRDIKP+NL+L G LK++DFG
Sbjct: 122 SYCHSKKVIHRDIKPENLLLGSAGELKIADFG---------------------------- 153
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +RRA + GTLDY+ PE++ + + + D WSLG + YE L+
Sbjct: 154 ---WSV------HAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELK 399
G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 202 GKPPFEANTYQDTYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVL 255
Query: 400 EHPW 403
EHPW
Sbjct: 256 EHPW 259
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 148/308 (48%), Gaps = 46/308 (14%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M ++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
E + + + I++L+ F D+ +YLI+EY P G++ L + E YI E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
A+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
W + +RR GTLDY+ PE++ + + + D WSLG + Y
Sbjct: 159 -------WSV------HAPSSRRX---XLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 202
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGV 395
E L+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ +
Sbjct: 203 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--L 256
Query: 396 EELKEHPW 403
E+ EHPW
Sbjct: 257 REVLEHPW 264
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 137 bits (346), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 160/324 (49%), Gaps = 63/324 (19%)
Query: 95 YMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV---- 150
Y+R + KIG + + ++ +G GA+GEV LC+ K A+K +KKS+ +G+
Sbjct: 26 YVRKKEGKIG-ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQ-FDKGRYSDDN 83
Query: 151 -------EHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDIL 203
E + +E +LL +D I++LF F+D + YL+ E+ GG++ ++
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKF 143
Query: 204 SEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLIL-DKNG--HLKLSDFGLCKPLEDKY 260
E A + + + I +H+HN VHRDIKP+N++L +KN ++K+ DFGL
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL-------- 195
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG 320
SS +D + R+R AY Y+APEV LKK
Sbjct: 196 SSFFSKDYKL------------------------RDRLGTAY-------YIAPEV-LKKK 223
Query: 321 YGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLIC 380
Y +CD WS G IMY +L GYPPF + + +K+ K F + ISDEA++LI
Sbjct: 224 YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIK 283
Query: 381 HLL-------CDVETRLGTRGVEE 397
+L C E L +R +++
Sbjct: 284 LMLTYDYNKRCTAEEALNSRWIKK 307
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 46/307 (14%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+R+ ++DF+ +GKG FG V L R + + I A+K L K+++ K G +R E +
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H +HRDIKP+NL+L NG LK++DFG
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFG---------------------------- 157
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +RR + GTLDY+ PE++ + + + D WSLG + YE L+
Sbjct: 158 ---WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELK 399
G PPF + + T R+I + FP+ +++ ARDLI LL ++ T + E+
Sbjct: 206 GMPPFEAHTYQETYRRIS--RVEFTFPD--FVTEGARDLISRLLKHNASQRLT--LAEVL 259
Query: 400 EHPWFRG 406
EHPW +
Sbjct: 260 EHPWIKA 266
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 147/305 (48%), Gaps = 46/305 (15%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E A
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 170
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W + +RR + GTLDY+ PE++ + + + D WSLG + YE L
Sbjct: 171 ----WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 217
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEEL 398
+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 218 VGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREV 271
Query: 399 KEHPW 403
EHPW
Sbjct: 272 LEHPW 276
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 148/308 (48%), Gaps = 46/308 (14%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M ++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
E + + + I++L+ F D+ +YLI+EY P G + L + E YI E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
A+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
W + +RR + GTLDY+ PE++ + + + D WSLG + Y
Sbjct: 157 -------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGV 395
E L+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ +
Sbjct: 201 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--L 254
Query: 396 EELKEHPW 403
E+ EHPW
Sbjct: 255 REVLEHPW 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 148/308 (48%), Gaps = 46/308 (14%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M ++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R
Sbjct: 3 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
E + + + I++L+ F D+ +YLI+EY P G + L + E YI E
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
A+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
W + +RR + GTLDY+ PE++ + + + D WSLG + Y
Sbjct: 159 -------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 202
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGV 395
E L+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ +
Sbjct: 203 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--L 256
Query: 396 EELKEHPW 403
E+ EHPW
Sbjct: 257 REVLEHPW 264
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/303 (31%), Positives = 146/303 (48%), Gaps = 46/303 (15%)
Query: 101 RKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLL 160
R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 6 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 65
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 125
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
H +HRDIKP+NL+L G LK++DFG
Sbjct: 126 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----------------------------- 156
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
W + +RRA + GTLDY+ PE++ + + + D WSLG + YE L+G
Sbjct: 157 --WSV------HAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 205
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKE 400
PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+ E
Sbjct: 206 KPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVLE 259
Query: 401 HPW 403
HPW
Sbjct: 260 HPW 262
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 136 bits (343), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 165/331 (49%), Gaps = 49/331 (14%)
Query: 91 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV 150
R ++ L+ + +G D F ++G+G FGEV C+ K TG+++A KKL K + KR
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 151 EHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILSED 206
+ E+ +LA+V SR IV L Y+F+ L L+M + GGDI + D E
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 207 VARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
A FY A+ V + +HQ N ++RD+KP+N++LD +G++++SD GL L+
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--------- 340
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
GQ + Y+ GT +MAPE+LL + Y D
Sbjct: 341 -------------AGQ--------------TKTKGYA--GTPGFMAPELLLGEEYDFSVD 371
Query: 327 WWSLGAIMYEMLIGYPPFCSDDPRITCRKIVN--WKTCLKFPEEPKISDEARDLICHLLC 384
+++LG +YEM+ PF + ++ +++ + + +P+ K S ++D LL
Sbjct: 372 YFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDFCEALLQ 429
Query: 385 -DVETRLGTR--GVEELKEHPWFRGIQWDKL 412
D E RLG R + L+ HP FR I W +L
Sbjct: 430 KDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/304 (30%), Positives = 147/304 (48%), Gaps = 46/304 (15%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H +HRDIKP+NL+L G LK++DFG
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------------------- 153
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +RRA + GTLDY+ PE++ + + + D WSLG + YE L+
Sbjct: 154 ---WSV------HAPSSRRA---ALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELK 399
G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 202 GKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVL 255
Query: 400 EHPW 403
EHPW
Sbjct: 256 EHPW 259
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 46/305 (15%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 158
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W + +RR + GTLDY+ PE + + + + D WSLG + YE L
Sbjct: 159 ----WSV------HAPSSRRT---TLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFL 205
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEEL 398
+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 206 VGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPX--LREV 259
Query: 399 KEHPW 403
EHPW
Sbjct: 260 LEHPW 264
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/307 (30%), Positives = 148/307 (48%), Gaps = 46/307 (14%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+R+ ++DF+ +GKG FG V L R + + I A+K L K+++ K G +R E +
Sbjct: 6 KRQWTLEDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANAL 125
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H +HRDIKP+NL+L NG LK++DFG
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSNGELKIADFG---------------------------- 157
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +RR + GTLDY+ PE++ + + + D WSLG + YE L+
Sbjct: 158 ---WSV------HAPSSRRD---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELK 399
G PPF + + T R+I + FP+ +++ ARDLI LL ++ T + E+
Sbjct: 206 GMPPFEAHTYQETYRRIS--RVEFTFPD--FVTEGARDLISRLLKHNASQRLT--LAEVL 259
Query: 400 EHPWFRG 406
EHPW +
Sbjct: 260 EHPWIKA 266
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 154/327 (47%), Gaps = 51/327 (15%)
Query: 78 NEEQEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMK 137
N +EE+ + E+ ++R+ ++DFE +GKG FG V L R K + I A+K
Sbjct: 11 NNPEEELASKQKNEES-----KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALK 65
Query: 138 KLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL 197
L K+++ K G +R E + + + I++L+ F D+ +YLI+EY P G + L
Sbjct: 66 VLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 125
Query: 198 MREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLE 257
+ E YI E A+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 126 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------ 179
Query: 258 DKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL 317
W + +RR GTLDY+ PE++
Sbjct: 180 -------------------------WSV------HAPSSRRD---DLCGTLDYLPPEMIE 205
Query: 318 KKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARD 377
+ + + D WSLG + YE L+G PPF ++ + T ++I + FP+ +++ ARD
Sbjct: 206 GRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARD 261
Query: 378 LICHLLCDVETRLGTRGVEELKEHPWF 404
LI LL ++ + E+ EHPW
Sbjct: 262 LISRLLKHNPSQRPM--LREVLEHPWI 286
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 165/331 (49%), Gaps = 49/331 (14%)
Query: 91 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV 150
R ++ L+ + +G D F ++G+G FGEV C+ K TG+++A KKL K + KR
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 151 EHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILSED 206
+ E+ +LA+V SR IV L Y+F+ L L+M + GGDI + D E
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 207 VARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
A FY A+ V + +HQ N ++RD+KP+N++LD +G++++SD GL L+
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--------- 340
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
GQ + Y+ GT +MAPE+LL + Y D
Sbjct: 341 -------------AGQ--------------TKTKGYA--GTPGFMAPELLLGEEYDFSVD 371
Query: 327 WWSLGAIMYEMLIGYPPFCSDDPRITCRKIVN--WKTCLKFPEEPKISDEARDLICHLLC 384
+++LG +YEM+ PF + ++ +++ + + +P+ K S ++D LL
Sbjct: 372 YFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDFCEALLQ 429
Query: 385 -DVETRLGTR--GVEELKEHPWFRGIQWDKL 412
D E RLG R + L+ HP FR I W +L
Sbjct: 430 KDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 135 bits (341), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 148/308 (48%), Gaps = 46/308 (14%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M ++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
E + + + I++L+ F D+ +YLI+EY P G + L + E YI E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
A+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
W + +RR + GTLDY+ PE++ + + + D WSLG + Y
Sbjct: 157 -------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGV 395
E L+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ +
Sbjct: 201 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--L 254
Query: 396 EELKEHPW 403
E+ EHPW
Sbjct: 255 REVLEHPW 262
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 135 bits (341), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 165/331 (49%), Gaps = 49/331 (14%)
Query: 91 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV 150
R ++ L+ + +G D F ++G+G FGEV C+ K TG+++A KKL K + KR
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 151 EHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILSED 206
+ E+ +LA+V SR IV L Y+F+ L L+M + GGDI + D E
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 207 VARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
A FY A+ V + +HQ N ++RD+KP+N++LD +G++++SD GL L+
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--------- 340
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
GQ + Y+ GT +MAPE+LL + Y D
Sbjct: 341 -------------AGQ--------------TKTKGYA--GTPGFMAPELLLGEEYDFSVD 371
Query: 327 WWSLGAIMYEMLIGYPPFCSDDPRITCRKIVN--WKTCLKFPEEPKISDEARDLICHLLC 384
+++LG +YEM+ PF + ++ +++ + + +P+ K S ++D LL
Sbjct: 372 YFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDFCEALLQ 429
Query: 385 -DVETRLGTR--GVEELKEHPWFRGIQWDKL 412
D E RLG R + L+ HP FR I W +L
Sbjct: 430 KDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/307 (30%), Positives = 147/307 (47%), Gaps = 50/307 (16%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 154
Query: 279 AEGQW--MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
W P R R L+ GTLDY+ PE++ + + + D WSLG + YE
Sbjct: 155 ----WSCHAPSSR-------RTTLS----GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 337 MLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVE 396
L+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ +
Sbjct: 200 FLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LR 253
Query: 397 ELKEHPW 403
E+ EHPW
Sbjct: 254 EVLEHPW 260
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 135 bits (340), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/302 (31%), Positives = 151/302 (50%), Gaps = 48/302 (15%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++++ +G GA+GEV LCR K T A+K ++K+ + + + E +L +D
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSK-LLEEVAVLKLLDHPN 97
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
I++L+ F+D YL+ME GG++ ++ +E A I + + + +H+HN
Sbjct: 98 IMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNI 157
Query: 228 VHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+KP+NL+L+ K+ +K+ DFGL E NQ+ +
Sbjct: 158 VHRDLKPENLLLESKEKDALIKIVDFGLSAVFE--------------NQKKM-------- 195
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
KERL GT Y+APEVL KK Y +CD WS+G I++ +L GYPPF
Sbjct: 196 --KERL---------------GTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPF 237
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPW 403
+ RK+ K PE +S+ A+DLI +L D + R+ ++ EHPW
Sbjct: 238 GGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISA---QQALEHPW 294
Query: 404 FR 405
+
Sbjct: 295 IK 296
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 135 bits (339), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 103/331 (31%), Positives = 165/331 (49%), Gaps = 49/331 (14%)
Query: 91 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV 150
R ++ L+ + +G D F ++G+G FGEV C+ K TG+++A KKL K + KR
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGY 229
Query: 151 EHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILSED 206
+ E+ +LA+V SR IV L Y+F+ L L+M + GGDI + D E
Sbjct: 230 QGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEP 289
Query: 207 VARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
A FY A+ V + +HQ N ++RD+KP+N++LD +G++++SD GL L+
Sbjct: 290 RAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELK--------- 340
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
GQ + Y+ GT +MAPE+LL + Y D
Sbjct: 341 -------------AGQ--------------TKTKGYA--GTPGFMAPELLLGEEYDFSVD 371
Query: 327 WWSLGAIMYEMLIGYPPFCSDDPRITCRKIVN--WKTCLKFPEEPKISDEARDLICHLLC 384
+++LG +YEM+ PF + ++ +++ + + +P+ K S ++D LL
Sbjct: 372 YFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYPD--KFSPASKDFCEALLQ 429
Query: 385 -DVETRLGTR--GVEELKEHPWFRGIQWDKL 412
D E RLG R + L+ HP FR I W +L
Sbjct: 430 KDPEKRLGFRDGSCDGLRTHPLFRDISWRQL 460
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/308 (30%), Positives = 148/308 (48%), Gaps = 46/308 (14%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M ++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
E + + + I++L+ F D+ +YLI+EY P G + L + E YI E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
A+ H +HRDIKP+NL+L G LK+++FG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG------------------------ 156
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
W + +RR + GTLDY+ PE++ + + + D WSLG + Y
Sbjct: 157 -------WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGV 395
E L+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ +
Sbjct: 201 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--L 254
Query: 396 EELKEHPW 403
E+ EHPW
Sbjct: 255 REVLEHPW 262
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 145/303 (47%), Gaps = 46/303 (15%)
Query: 101 RKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLL 160
R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
H +HRDIKP+NL+L G LK++DFG
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----------------------------- 153
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
W + +RR + GTLDY+ PE++ + + + D WSLG + YE L+G
Sbjct: 154 --WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKE 400
PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+ E
Sbjct: 203 KPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVLE 256
Query: 401 HPW 403
HPW
Sbjct: 257 HPW 259
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 46/305 (15%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 155
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W + +RR GTLDY+ PE++ + + + D WSLG + YE L
Sbjct: 156 ----WSV------HAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 202
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEEL 398
+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 203 VGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREV 256
Query: 399 KEHPW 403
EHPW
Sbjct: 257 LEHPW 261
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 134 bits (338), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 146/304 (48%), Gaps = 46/304 (15%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 1 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 60
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 61 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H +HRDIKP+NL+L G LK++DFG
Sbjct: 121 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------------------- 152
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +RR + GTLDY+ PE++ + + + D WSLG + YE L+
Sbjct: 153 ---WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 200
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELK 399
G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 201 GKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVL 254
Query: 400 EHPW 403
EHPW
Sbjct: 255 EHPW 258
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 147/308 (47%), Gaps = 46/308 (14%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M ++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R
Sbjct: 1 MESKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 60
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
E + + + I++L+ F D+ +YLI+EY P G + L + E YI E
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
A+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
W + +RR GTLDY+ PE++ + + + D WSLG + Y
Sbjct: 157 -------WSV------HAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCY 200
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGV 395
E L+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ +
Sbjct: 201 EFLVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--L 254
Query: 396 EELKEHPW 403
E+ EHPW
Sbjct: 255 REVLEHPW 262
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 46/305 (15%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 154
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W + +RR GTLDY+ PE++ + + + D WSLG + YE L
Sbjct: 155 ----WSV------HAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 201
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEEL 398
+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 202 VGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREV 255
Query: 399 KEHPW 403
EHPW
Sbjct: 256 LEHPW 260
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 146/304 (48%), Gaps = 46/304 (15%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 6 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 65
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H +HRDIKP+NL+L G LK++DFG
Sbjct: 126 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------------------- 157
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +RR + GTLDY+ PE++ + + + D WSLG + YE L+
Sbjct: 158 ---WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 205
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELK 399
G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 206 GKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVL 259
Query: 400 EHPW 403
EHPW
Sbjct: 260 EHPW 263
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 46/305 (15%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E A
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ H +HRDIKP+NL+L G LK+++FG
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFG--------------------------- 155
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W + +RR + GTLDY+ PE++ + + + D WSLG + YE L
Sbjct: 156 ----WSV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 202
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEEL 398
+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 203 VGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREV 256
Query: 399 KEHPW 403
EHPW
Sbjct: 257 LEHPW 261
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 46/305 (15%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E A
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 158
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W + +RR GTLDY+ PE++ + + + D WSLG + YE L
Sbjct: 159 ----WSV------HAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 205
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEEL 398
+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 206 VGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREV 259
Query: 399 KEHPW 403
EHPW
Sbjct: 260 LEHPW 264
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 147/305 (48%), Gaps = 46/305 (15%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E A
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 154
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W + +RR + GTLDY+ PE++ + + + D WSLG + YE L
Sbjct: 155 ----WSV------HAPSSRRD---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 201
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEEL 398
+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 202 VGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREV 255
Query: 399 KEHPW 403
EHPW
Sbjct: 256 LEHPW 260
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 134 bits (338), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 46/305 (15%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
++R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFG--------------------------- 153
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W + +RR GTLDY+ PE++ + + + D WSLG + YE L
Sbjct: 154 ----WSV------HAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFL 200
Query: 339 IGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEEL 398
+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 201 VGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREV 254
Query: 399 KEHPW 403
EHPW
Sbjct: 255 LEHPW 259
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 46/304 (15%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H +HRDIKP+NL+L G LK++DFG
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------------------- 153
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +RR GTLDY+ PE++ + + + D WSLG + YE L+
Sbjct: 154 ---WSV------HAPSSRRT---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELK 399
G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 202 GKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVL 255
Query: 400 EHPW 403
EHPW
Sbjct: 256 EHPW 259
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 134 bits (337), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 46/303 (15%)
Query: 101 RKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLL 160
R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 3 RQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQ 62
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALS 122
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
H +HRDIKP+NL+L G LK++DFG
Sbjct: 123 YCHSKRVIHRDIKPENLLLGSAGELKIADFG----------------------------- 153
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
W + +RR GTLDY+ PE++ + + + D WSLG + YE L+G
Sbjct: 154 --WSV------HAPSSRRT---ELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 202
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKE 400
PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+ E
Sbjct: 203 KPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVLE 256
Query: 401 HPW 403
HPW
Sbjct: 257 HPW 259
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 46/304 (15%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H +HRDIKP+NL+L G LK++DFG
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------------------- 153
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +RR GTLDY+ PE++ + + + D WSLG + YE L+
Sbjct: 154 ---WSV------HAPSSRRT---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELK 399
G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 202 GKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVL 255
Query: 400 EHPW 403
EHPW
Sbjct: 256 EHPW 259
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 147/303 (48%), Gaps = 47/303 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D ++++ +G GA+GEV LC+ K TG A+K +KKS + + E +L ++D
Sbjct: 4 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 63
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
I++L+ F+D YL+ME GG++ ++ SE A + + + +H+H
Sbjct: 64 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 123
Query: 226 NYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
N VHRD+KP+NL+L+ ++ +K+ DFGL E G
Sbjct: 124 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE----------------------VGG 161
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
M KERL GT Y+APEVL KK Y +CD WS G I+Y +L GYP
Sbjct: 162 KM--KERL---------------GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYP 203
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLGTRGVEELKEH 401
PF + +++ K P+ ++SDEA+ L+ +L + R+ EE H
Sbjct: 204 PFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISA---EEALNH 260
Query: 402 PWF 404
PW
Sbjct: 261 PWI 263
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 46/304 (15%)
Query: 100 RRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
+R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E +
Sbjct: 2 KRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEI 61
Query: 160 LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
+ + I++L+ F D+ +YLI+EY P G + L + E YI E A+
Sbjct: 62 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H +HRDIKP+NL+L G LK++DFG
Sbjct: 122 SYCHSKRVIHRDIKPENLLLGSAGELKIADFG---------------------------- 153
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +RR GTLDY+ PE++ + + + D WSLG + YE L+
Sbjct: 154 ---WSV------HAPSSRRX---XLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 201
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELK 399
G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E+
Sbjct: 202 GKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVL 255
Query: 400 EHPW 403
EHPW
Sbjct: 256 EHPW 259
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 147/303 (48%), Gaps = 47/303 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D ++++ +G GA+GEV LC+ K TG A+K +KKS + + E +L ++D
Sbjct: 21 DRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDH 80
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
I++L+ F+D YL+ME GG++ ++ SE A + + + +H+H
Sbjct: 81 PNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKH 140
Query: 226 NYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
N VHRD+KP+NL+L+ ++ +K+ DFGL E G
Sbjct: 141 NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE----------------------VGG 178
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
M KERL GT Y+APEVL KK Y +CD WS G I+Y +L GYP
Sbjct: 179 KM--KERL---------------GTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYP 220
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLGTRGVEELKEH 401
PF + +++ K P+ ++SDEA+ L+ +L + R+ EE H
Sbjct: 221 PFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISA---EEALNH 277
Query: 402 PWF 404
PW
Sbjct: 278 PWI 280
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 132 bits (332), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/306 (30%), Positives = 145/306 (47%), Gaps = 46/306 (15%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
L R+ ++DFE +GKG FG V L R K + I A+K L K+++ K G +R E
Sbjct: 3 LGSRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREV 62
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
+ + + I++L+ F D+ +YLI+EY P G + L + E YI E
Sbjct: 63 EIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELAN 122
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
A+ H +HRDIKP+NL+L G LK++DFG
Sbjct: 123 ALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG-------------------------- 156
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
W + +RR GTLDY+ PE++ + + + D WSLG + YE
Sbjct: 157 -----WSV------HAPSSRRD---DLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEF 202
Query: 338 LIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEE 397
L+G PPF ++ + T ++I + FP+ +++ ARDLI LL ++ + E
Sbjct: 203 LVGKPPFEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LRE 256
Query: 398 LKEHPW 403
+ EHPW
Sbjct: 257 VLEHPW 262
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 154/305 (50%), Gaps = 49/305 (16%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D ++ ++GKG+FGEV LC+ K TG+ A+K + K ++ ++ E + E LL ++D
Sbjct: 49 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 108
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE-DVARFYIAESVLAIHSIHQ 224
I++L+ F+D + YL+ E GG++ ++ SE D AR I + + I +H+
Sbjct: 109 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYMHK 167
Query: 225 HNYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+KP+NL+L+ K+ ++++ DFGL E +S ++D+
Sbjct: 168 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDK------------- 211
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+GT Y+APEV L Y +CD WS G I+Y +L G
Sbjct: 212 -----------------------IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGC 247
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET-RLGTRGVEELKE 400
PPF + +K+ K + P+ K+S+ A+DLI +L V + R+ R + +
Sbjct: 248 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISAR---DALD 304
Query: 401 HPWFR 405
H W +
Sbjct: 305 HEWIQ 309
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 154/305 (50%), Gaps = 49/305 (16%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D ++ ++GKG+FGEV LC+ K TG+ A+K + K ++ ++ E + E LL ++D
Sbjct: 50 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 109
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE-DVARFYIAESVLAIHSIHQ 224
I++L+ F+D + YL+ E GG++ ++ SE D AR I + + I +H+
Sbjct: 110 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYMHK 168
Query: 225 HNYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+KP+NL+L+ K+ ++++ DFGL E +S ++D+
Sbjct: 169 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDK------------- 212
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+GT Y+APEV L Y +CD WS G I+Y +L G
Sbjct: 213 -----------------------IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGC 248
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET-RLGTRGVEELKE 400
PPF + +K+ K + P+ K+S+ A+DLI +L V + R+ R + +
Sbjct: 249 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISAR---DALD 305
Query: 401 HPWFR 405
H W +
Sbjct: 306 HEWIQ 310
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 131 bits (329), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 142/300 (47%), Gaps = 46/300 (15%)
Query: 104 GIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV 163
++DFE +GKG FG V L R K I A+K L K+++ K G +R E + + +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 164 DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIH 223
I++L+ F D+ +YLI+EY P G + L + E YI E A+ H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
+HRDIKP+NL+L G LK++DFG W
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFG-------------------------------W 151
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPP 343
+ +RR + GTLDY+ PE++ + + + D WSLG + YE L+G PP
Sbjct: 152 SV------HAPSSRRT---TLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPP 202
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F ++ + T ++I + FP+ +++ ARDLI LL ++ + E+ EHPW
Sbjct: 203 FEANTYQETYKRIS--RVEFTFPD--FVTEGARDLISRLLKHNPSQRPM--LREVLEHPW 256
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 154/305 (50%), Gaps = 49/305 (16%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D ++ ++GKG+FGEV LC+ K TG+ A+K + K ++ ++ E + E LL ++D
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE-DVARFYIAESVLAIHSIHQ 224
I++L+ F+D + YL+ E GG++ ++ SE D AR I + + I +H+
Sbjct: 86 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYMHK 144
Query: 225 HNYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+KP+NL+L+ K+ ++++ DFGL E +S ++D+
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDK------------- 188
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+GT Y+APEV L Y +CD WS G I+Y +L G
Sbjct: 189 -----------------------IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGC 224
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET-RLGTRGVEELKE 400
PPF + +K+ K + P+ K+S+ A+DLI +L V + R+ R + +
Sbjct: 225 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISAR---DALD 281
Query: 401 HPWFR 405
H W +
Sbjct: 282 HEWIQ 286
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 142/302 (47%), Gaps = 48/302 (15%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F + ++G GAF EV L + + TG++FA+K +KKS + +E +E +L ++
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLE---NEIAVLKKIKHEN 67
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
IV L ++ + YL+M+ + GG++ ++ + +E A I + + A+ +H++
Sbjct: 68 IVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGI 127
Query: 228 VHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+KP+NL+ ++N + ++DFGL K +E I++
Sbjct: 128 VHRDLKPENLLYLTPEENSKIMITDFGLSK----------MEQNGIMS------------ 165
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT Y+APEVL +K Y D WS+G I Y +L GYPPF
Sbjct: 166 ------------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
+ KI + P IS+ A+D ICHLL T E+ HPW
Sbjct: 208 YEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYT--CEKALSHPWI 265
Query: 405 RG 406
G
Sbjct: 266 DG 267
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 154/305 (50%), Gaps = 49/305 (16%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D ++ ++GKG+FGEV LC+ K TG+ A+K + K ++ ++ E + E LL ++D
Sbjct: 32 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 91
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE-DVARFYIAESVLAIHSIHQ 224
I++L+ F+D + YL+ E GG++ ++ SE D AR I + + I +H+
Sbjct: 92 PNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYMHK 150
Query: 225 HNYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+KP+NL+L+ K+ ++++ DFGL E +S ++D+
Sbjct: 151 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKMKDK------------- 194
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+GT Y+APEV L Y +CD WS G I+Y +L G
Sbjct: 195 -----------------------IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGC 230
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET-RLGTRGVEELKE 400
PPF + +K+ K + P+ K+S+ A+DLI +L V + R+ R + +
Sbjct: 231 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISAR---DALD 287
Query: 401 HPWFR 405
H W +
Sbjct: 288 HEWIQ 292
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 127 bits (319), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 150/305 (49%), Gaps = 49/305 (16%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D ++ ++GKG+FGEV LC+ K TG+ A+K + K ++ ++ E + E LL ++D
Sbjct: 26 DRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDH 85
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE-DVARFYIAESVLAIHSIHQ 224
I +L+ F+D + YL+ E GG++ ++ SE D AR I + + I H+
Sbjct: 86 PNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARI-IRQVLSGITYXHK 144
Query: 225 HNYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+KP+NL+L+ K+ ++++ DFGL E +S +D+
Sbjct: 145 NKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---ASKKXKDK------------- 188
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+GT Y+APEV L Y +CD WS G I+Y +L G
Sbjct: 189 -----------------------IGTAYYIAPEV-LHGTYDEKCDVWSTGVILYILLSGC 224
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET-RLGTRGVEELKE 400
PPF + +K+ K + P+ K+S+ A+DLI L V + R+ R + +
Sbjct: 225 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISAR---DALD 281
Query: 401 HPWFR 405
H W +
Sbjct: 282 HEWIQ 286
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 46/302 (15%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
FE +G GAF EV L K TG++FA+K + K + +G+ + +E +L ++
Sbjct: 24 FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIPKKAL--KGKESSIENEIAVLRKIKHEN 81
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
IV L ++ + LYL+M+ + GG++ ++ + +E A I + + A++ +H+
Sbjct: 82 IVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGI 141
Query: 228 VHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+KP+NL+ D+ + +SDFGL K E +G M
Sbjct: 142 VHRDLKPENLLYYSQDEESKIMISDFGLSK----------------------MEGKGDVM 179
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+ GT Y+APEVL +K Y D WS+G I Y +L GYPPF
Sbjct: 180 S-----------------TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
++ +I+ + P ISD A+D I +L+ + T E+ HPW
Sbjct: 223 YDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYT--CEQAARHPWI 280
Query: 405 RG 406
G
Sbjct: 281 AG 282
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 140/298 (46%), Gaps = 46/298 (15%)
Query: 111 LTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQ 170
+ ++GKG+FGEV C+ + T + +A+K + K+ K + E LL ++D I++
Sbjct: 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPNIMK 85
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
LF +DS Y++ E GG++ +++ SE A I + I +H+HN VHR
Sbjct: 86 LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHR 145
Query: 231 DIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
D+KP+N++L +K+ +K+ DFGL +
Sbjct: 146 DLKPENILLESKEKDCDIKIIDFGLSTCFQ------------------------------ 175
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSD 347
Q K R +GT Y+APEV L+ Y +CD WS G I+Y +L G PPF
Sbjct: 176 ---QNTKMKDR------IGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPFYGK 225
Query: 348 DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFR 405
+ +++ K P+ ISD+A+DLI +L L + L EHPW +
Sbjct: 226 NEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT-FHPSLRITATQCL-EHPWIQ 281
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 145/319 (45%), Gaps = 73/319 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLK-----------------------RGQV 150
IGKG++G V+L + +AMK L K ++++ RG +
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 151 EHVRSERNLLAEVDSRCIVQLFYSFQDS--DFLYLIMEYLPGGDIMTLLMREDILSEDVA 208
E V E +L ++D +V+L D D LY++ E + G +M + + LSED A
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP-LSEDQA 139
Query: 209 RFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDE 268
RFY + + I +H +HRDIKP NL++ ++GH+K++DFG+
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEF------------ 187
Query: 269 DIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGMEC 325
+ AL +TVGT +MAPE L K G
Sbjct: 188 --------------------------KGSDALLSNTVGTPAFMAPESLSETRKIFSGKAL 221
Query: 326 DWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-C 384
D W++G +Y + G PF D RI C L+FP++P I+++ +DLI +L
Sbjct: 222 DVWAMGVTLYCFVFGQCPFM--DERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDK 279
Query: 385 DVETRLGTRGVEELKEHPW 403
+ E+R+ V E+K HPW
Sbjct: 280 NPESRI---VVPEIKLHPW 295
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 125 bits (313), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 142/305 (46%), Gaps = 55/305 (18%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLK-KSEMLKRGQVEHVRS----ERNLLAEVDSR- 166
+IG+G VR C + TG FA+K ++ +E L Q+E VR E ++L +V
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
I+ L S++ S F++L+ + + G++ L + LSE R + + A+ +H +N
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
VHRD+KP+N++LD N ++LSDFG LE P
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLE----------------------------P 252
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVL------LKKGYGMECDWWSLGAIMYEMLIG 340
E+L++ GT Y+APE+L GYG E D W+ G I++ +L G
Sbjct: 253 GEKLRE-----------LCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAG 301
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELK 399
PPF + R I+ + PE S +DLI LL D E RL E+
Sbjct: 302 SPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTA---EQAL 358
Query: 400 EHPWF 404
+HP+F
Sbjct: 359 QHPFF 363
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/308 (32%), Positives = 142/308 (46%), Gaps = 50/308 (16%)
Query: 101 RKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLL 160
R IDDFE +GKG FG V L R K + I A+K L KS++ K G +R E +
Sbjct: 18 RHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQ 77
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
A + I++L+ F D +YLI+EY P G++ L + E + E A+
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALM 137
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
H +HRDIKP+NL+L G LK++DFG
Sbjct: 138 YCHGKKVIHRDIKPENLLLGLKGELKIADFG----------------------------- 168
Query: 281 GQWMMPKERLQQWKRNRRALAYSTV-GTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI 339
W + +L T+ GTLDY+ PE++ + + + D W +G + YE+L+
Sbjct: 169 ------------WSVHAPSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLV 216
Query: 340 GYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEEL 398
G PPF S T R+IV K LKFP + A+DLI LL + RL + ++
Sbjct: 217 GNPPFESASHNETYRRIV--KVDLKFPAS--VPTGAQDLISKLLRHNPSERL---PLAQV 269
Query: 399 KEHPWFRG 406
HPW R
Sbjct: 270 SAHPWVRA 277
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 46/301 (15%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+ + ++GKG+FGEV C+ + T + +A+K + K+ K + E LL ++D
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPN 82
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
I++LF +DS Y++ E GG++ +++ SE A I + I +H+HN
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 228 VHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+KP+N++L +K+ +K+ DFGL +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--------------------------- 175
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
Q K R +GT Y+APEV L+ Y +CD WS G I+Y +L G PPF
Sbjct: 176 ------QNTKMKDR------IGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPF 222
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
+ +++ K P+ ISD+A+DLI +L L + L EHPW
Sbjct: 223 YGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT-FHPSLRITATQCL-EHPWI 280
Query: 405 R 405
+
Sbjct: 281 Q 281
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 141/301 (46%), Gaps = 46/301 (15%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+ + ++GKG+FGEV C+ + T + +A+K + K+ K + E LL ++D
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASA-KNKDTSTILREVELLKKLDHPN 82
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
I++LF +DS Y++ E GG++ +++ SE A I + I +H+HN
Sbjct: 83 IMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 228 VHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+KP+N++L +K+ +K+ DFGL +
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ--------------------------- 175
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
Q K R +GT Y+APEV L+ Y +CD WS G I+Y +L G PPF
Sbjct: 176 ------QNTKMKDR------IGTAYYIAPEV-LRGTYDEKCDVWSAGVILYILLSGTPPF 222
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
+ +++ K P+ ISD+A+DLI +L L + L EHPW
Sbjct: 223 YGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT-FHPSLRITATQCL-EHPWI 280
Query: 405 R 405
+
Sbjct: 281 Q 281
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 141/301 (46%), Gaps = 44/301 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
DD++ +GKGAF VR C KT + +A K + ++ R + + E + +
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDH-QKLEREARICRLLKH 89
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+L S + F YL+ + + GG++ ++ + SE A I + + +++ IHQH
Sbjct: 90 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 226 NYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
+ VHRD+KP+NL+L K +KL+DFGL E +G+
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGL-----------------------AIEVQGE 186
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
Q W + GT Y++PEVL K YG D W+ G I+Y +L+GYP
Sbjct: 187 Q-------QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYP 231
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHP 402
PF +D ++I PE ++ EA++LI +L + T ++ +HP
Sbjct: 232 PFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIT--ADQALKHP 289
Query: 403 W 403
W
Sbjct: 290 W 290
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 121 bits (304), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 141/299 (47%), Gaps = 48/299 (16%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+E IG G F +V+L TGE+ A+K + K+ + + +++E L + +
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTL--GSDLPRIKTEIEALKNLRHQH 69
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
I QL++ + ++ +++++EY PGG++ ++ +D LSE+ R + V A+ +H Y
Sbjct: 70 ICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGY 129
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLC-KPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
HRD+KP+NL+ D+ LKL DFGLC KP
Sbjct: 130 AHRDLKPENLLFDEYHKLKLIDFGLCAKP------------------------------- 158
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPPFC 345
K N+ + G+L Y APE++ K Y G E D WS+G ++Y ++ G+ PF
Sbjct: 159 -------KGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
Query: 346 SDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +KI+ K + PK + L+ + V+ + ++ L HPW
Sbjct: 212 DDNVMALYKKIMRGKY-----DVPKWLSPSSILLLQQMLQVDPK-KRISMKNLLNHPWI 264
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 139/298 (46%), Gaps = 48/298 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
++G GAF EV L K T ++ A+K + K + G+ + +E +L ++ IV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKAL--EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
++ LYLIM+ + GG++ ++ + +E A I + + A+ +H VHRD+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 233 KPDNLI---LDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
KP+NL+ LD++ + +SDFGL K +ED S +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVL-------------------------- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP 349
+ GT Y+APEVL +K Y D WS+G I Y +L GYPPF ++
Sbjct: 176 ------------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 223
Query: 350 RITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFRG 406
+I+ + P ISD A+D I HL+ D E R E+ +HPW G
Sbjct: 224 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC---EQALQHPWIAG 278
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 139/298 (46%), Gaps = 48/298 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
++G GAF EV L K T ++ A+K + K + G+ + +E +L ++ IV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
++ LYLIM+ + GG++ ++ + +E A I + + A+ +H VHRD+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 233 KPDNLI---LDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
KP+NL+ LD++ + +SDFGL K +ED S +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVL-------------------------- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP 349
+ GT Y+APEVL +K Y D WS+G I Y +L GYPPF ++
Sbjct: 176 ------------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 223
Query: 350 RITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFRG 406
+I+ + P ISD A+D I HL+ D E R E+ +HPW G
Sbjct: 224 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC---EQALQHPWIAG 278
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 139/298 (46%), Gaps = 48/298 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
++G GAF EV L K T ++ A+K + K + G+ + +E +L ++ IV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
++ LYLIM+ + GG++ ++ + +E A I + + A+ +H VHRD+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 233 KPDNLI---LDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
KP+NL+ LD++ + +SDFGL K +ED S +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVL-------------------------- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP 349
+ GT Y+APEVL +K Y D WS+G I Y +L GYPPF ++
Sbjct: 176 ------------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 223
Query: 350 RITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFRG 406
+I+ + P ISD A+D I HL+ D E R E+ +HPW G
Sbjct: 224 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC---EQALQHPWIAG 278
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 139/298 (46%), Gaps = 48/298 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
++G GAF EV L K T ++ A+K + K + G+ + +E +L ++ IV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEAL--EGKEGSMENEIAVLHKIKHPNIVALD 82
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
++ LYLIM+ + GG++ ++ + +E A I + + A+ +H VHRD+
Sbjct: 83 DIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDL 142
Query: 233 KPDNLI---LDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
KP+NL+ LD++ + +SDFGL K +ED S +
Sbjct: 143 KPENLLYYSLDEDSKIMISDFGLSK-MEDPGSVL-------------------------- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP 349
+ GT Y+APEVL +K Y D WS+G I Y +L GYPPF ++
Sbjct: 176 ------------STACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDEND 223
Query: 350 RITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFRG 406
+I+ + P ISD A+D I HL+ D E R E+ +HPW G
Sbjct: 224 AKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTC---EQALQHPWIAG 278
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 136/302 (45%), Gaps = 44/302 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D+++ +GKGAF VR C TG+ +A K + ++ R + + E + +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLKH 62
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+L S + F YL+ + + GG++ ++ + SE A I + + +++ H +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 226 NYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHRD+KP+NL+L K +KL+DFGL E +G
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGL-----------------------AIEVQGD 159
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
Q W + GT Y++PEVL K YG D W+ G I+Y +L+GYP
Sbjct: 160 Q-------QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHP 402
PF +D ++I PE ++ EA+DLI +L + T E +HP
Sbjct: 205 PFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRIT--ASEALKHP 262
Query: 403 WF 404
W
Sbjct: 263 WI 264
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 135/301 (44%), Gaps = 44/301 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D+++ IGKGAF VR C TG +A K + ++ R + + E + +
Sbjct: 4 DEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH-QKLEREARICRLLKH 62
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+L S + F YL+ + + GG++ ++ + SE A I + + A+ HQ
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 226 NYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHRD+KP+NL+L K +KL+DFGL E +G
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGL-----------------------AIEVQGD 159
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
Q W + GT Y++PEVL K+ YG D W+ G I+Y +L+GYP
Sbjct: 160 -------QQAW--------FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYP 204
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHP 402
PF +D ++I PE ++ EA++LI +L + T E +HP
Sbjct: 205 PFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRIT--AHEALKHP 262
Query: 403 W 403
W
Sbjct: 263 W 263
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 136/302 (45%), Gaps = 44/302 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D+++ +GKGAF VR C TG+ +A K + ++ R + + E + +
Sbjct: 4 DEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDH-QKLEREARICRLLKH 62
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+L S + F YL+ + + GG++ ++ + SE A I + + +++ H +
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 226 NYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHRD+KP+NL+L K +KL+DFGL E +G
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGL-----------------------AIEVQGD 159
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
Q W + GT Y++PEVL K YG D W+ G I+Y +L+GYP
Sbjct: 160 -------QQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYP 204
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHP 402
PF +D ++I PE ++ EA+DLI +L + T E +HP
Sbjct: 205 PFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRIT--ASEALKHP 262
Query: 403 WF 404
W
Sbjct: 263 WI 264
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 115/232 (49%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + +E + +D+ +V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D DF+Y+++E ++ L R ++E AR+++ +++ + +H + +HRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+ + +K+ DFGL T E +G+
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLA---------------------TKIEFDGE---------- 197
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ L GT +Y+APEVL KKG+ E D WSLG I+Y +L+G PPF
Sbjct: 198 ---RKKTLC----GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + E ++ + + +V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 105
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D+DF+++++E ++ L R L+E AR+Y+ + VL +H++ +HRD+
Sbjct: 106 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 165
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+++ +K+ DFGL T E +G+
Sbjct: 166 KLGNLFLNEDLEVKIGDFGLA---------------------TKVEYDGE---------- 194
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ L GT +Y+APEVL KKG+ E D WS+G IMY +L+G PPF
Sbjct: 195 ---RKKVLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + E ++ + + +V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D+DF+++++E ++ L R L+E AR+Y+ + VL +H++ +HRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+++ +K+ DFGL T E +G+
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLA---------------------TKVEYDGE---------- 172
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ L GT +Y+APEVL KKG+ E D WS+G IMY +L+G PPF
Sbjct: 173 ---RKKTLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + E ++ + + +V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 107
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D+DF+++++E ++ L R L+E AR+Y+ + VL +H++ +HRD+
Sbjct: 108 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 167
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+++ +K+ DFGL T E +G+
Sbjct: 168 KLGNLFLNEDLEVKIGDFGLA---------------------TKVEYDGE---------- 196
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ L GT +Y+APEVL KKG+ E D WS+G IMY +L+G PPF
Sbjct: 197 ---RKKVLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + E ++ + + +V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 83
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D+DF+++++E ++ L R L+E AR+Y+ + VL +H++ +HRD+
Sbjct: 84 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 143
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+++ +K+ DFGL T E +G+
Sbjct: 144 KLGNLFLNEDLEVKIGDFGLA---------------------TKVEYDGE---------- 172
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ L GT +Y+APEVL KKG+ E D WS+G IMY +L+G PPF
Sbjct: 173 ---RKKTLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 115/232 (49%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + +E + +D+ +V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D DF+Y+++E ++ L R ++E AR+++ +++ + +H + +HRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+ + +K+ DFGL T E +G+
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLA---------------------TKIEFDGE---------- 197
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ L GT +Y+APEVL KKG+ E D WSLG I+Y +L+G PPF
Sbjct: 198 ---RKKXLC----GTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 115 bits (287), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + E ++ + + +V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 87
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D+DF+++++E ++ L R L+E AR+Y+ + VL +H++ +HRD+
Sbjct: 88 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 147
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+++ +K+ DFGL T E +G+
Sbjct: 148 KLGNLFLNEDLEVKIGDFGLA---------------------TKVEYDGE---------- 176
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ L GT +Y+APEVL KKG+ E D WS+G IMY +L+G PPF
Sbjct: 177 ---RKKTLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + +E + +D+ +V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D DF+Y+++E ++ L R ++E AR+++ +++ + +H + +HRD+
Sbjct: 109 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 168
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+ + +K+ DFGL T E +G ER +
Sbjct: 169 KLGNLFLNDDMDVKIGDFGLA---------------------TKIEFDG------ERKKD 201
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +Y+APEVL KKG+ E D WSLG I+Y +L+G PPF
Sbjct: 202 L-----------CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 116/232 (50%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + E ++ + + +V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFH 81
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D+DF+++++E ++ L R L+E AR+Y+ + VL +H++ +HRD+
Sbjct: 82 GFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDL 141
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+++ +K+ DFGL T E +G+
Sbjct: 142 KLGNLFLNEDLEVKIGDFGLA---------------------TKVEYDGE---------- 170
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ L GT +Y+APEVL KKG+ E D WS+G IMY +L+G PPF
Sbjct: 171 ---RKKVLC----GTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 114 bits (286), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 57/315 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G++ E + C K T +A+K + KS KR E + LL I+ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEIEI---LLRYGQHPNIITLKD 88
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
+ D +YL+ E + GG+++ ++R+ SE A F + + +H VHRD+K
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 234 PDNLI-LDKNGH---LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
P N++ +D++G+ L++ DFG K L
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQL--------------------------------- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC---S 346
R L + T +++APEVL ++GY CD WSLG ++Y ML GY PF S
Sbjct: 176 -----RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
Query: 347 DDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFR 405
D P +I + K L +S+ A+DL+ +L D RL + ++ +HPW
Sbjct: 231 DTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK---QVLQHPWV- 286
Query: 406 GIQWDKLYEMEAAYK 420
Q DKL + + +++
Sbjct: 287 -TQKDKLPQSQLSHQ 300
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 135/296 (45%), Gaps = 44/296 (14%)
Query: 91 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV 150
R +E+M K D+++ +GKGAF VR C KTTG FA K + ++ R
Sbjct: 15 RGSEFMMNASTKFS-DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DF 72
Query: 151 EHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF 210
+ + E + ++ IV+L S Q+ F YL+ + + GG++ ++ + SE A
Sbjct: 73 QKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 132
Query: 211 YIAESVLAIHSIHQHNYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLED 267
I + + +I H + VHR++KP+NL+L K +KL+DFGL + D
Sbjct: 133 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND--------- 183
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDW 327
SEA W + GT Y++PEVL K Y D
Sbjct: 184 ---------SEA-------------W--------HGFAGTPGYLSPEVLKKDPYSKPVDI 213
Query: 328 WSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL 383
W+ G I+Y +L+GYPPF +D +I PE ++ EA+ LI +L
Sbjct: 214 WACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 269
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 57/315 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G++ E + C K T +A+K + KS KR E + LL I+ L
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKS---KRDPSEEIEI---LLRYGQHPNIITLKD 88
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
+ D +YL+ E + GG+++ ++R+ SE A F + + +H VHRD+K
Sbjct: 89 VYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLK 148
Query: 234 PDNLI-LDKNGH---LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
P N++ +D++G+ L++ DFG K L
Sbjct: 149 PSNILYVDESGNPECLRICDFGFAKQL--------------------------------- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC---S 346
R L + T +++APEVL ++GY CD WSLG ++Y ML GY PF S
Sbjct: 176 -----RAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPS 230
Query: 347 DDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFR 405
D P +I + K L +S+ A+DL+ +L D RL + ++ +HPW
Sbjct: 231 DTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAK---QVLQHPWV- 286
Query: 406 GIQWDKLYEMEAAYK 420
Q DKL + + +++
Sbjct: 287 -TQKDKLPQSQLSHQ 300
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 114/232 (49%), Gaps = 38/232 (16%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+GKG F + T E+FA K + KS +LK Q E + +E + +D+ +V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
F+D DF+Y+++E ++ L R ++E AR+++ +++ + +H + +HRD+
Sbjct: 93 GFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDL 152
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K NL L+ + +K+ DFGL T E +G ER +
Sbjct: 153 KLGNLFLNDDMDVKIGDFGLA---------------------TKIEFDG------ERKKD 185
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +Y+APEVL KKG+ E D WSLG I+Y +L+G PPF
Sbjct: 186 L-----------CGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 114 bits (285), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 142/325 (43%), Gaps = 58/325 (17%)
Query: 97 RLQRRKIGIDD-FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
+L R I D +E IG G++ + C K T FA+K + KS KR E +
Sbjct: 12 QLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKS---KRDPTEEIEI 68
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
LL I+ L + D ++Y++ E + GG+++ ++R+ SE A +
Sbjct: 69 ---LLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTI 125
Query: 216 VLAIHSIHQHNYVHRDIKPDNLI-LDKNGH---LKLSDFGLCKPLEDKYSSILLEDEDII 271
+ +H VHRD+KP N++ +D++G+ +++ DFG K L
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL--------------- 170
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
R L + T +++APEVL ++GY CD WSLG
Sbjct: 171 -----------------------RAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLG 207
Query: 332 AIMYEMLIGYPPFCS---DDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVE 387
++Y ML GY PF + D P +I + K L +SD A+DL+ +L D
Sbjct: 208 VLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPH 267
Query: 388 TRLGTRGVEELKEHPWFRGIQWDKL 412
RL V HPW + WD+L
Sbjct: 268 QRLTAALV---LRHPWI--VHWDQL 287
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 135/300 (45%), Gaps = 47/300 (15%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
FE+L GKGAF VR C G+ +A K + ++ R + + E + +
Sbjct: 27 FEEL---GKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDH-QKLEREARICRLLKHPN 82
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
IV+L S + YLI + + GG++ ++ + SE A I + + A+ HQ
Sbjct: 83 IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGV 142
Query: 228 VHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+KP+NL+L K +KL+DFGL E EG+
Sbjct: 143 VHRDLKPENLLLASKLKGAAVKLADFGL-----------------------AIEVEGEQ- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
Q W + GT Y++PEVL K YG D W+ G I+Y +L+GYPPF
Sbjct: 179 ------QAW--------FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 224
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
+D ++I PE ++ EA+DLI +L ++ T E LK HPW
Sbjct: 225 WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT-AAEALK-HPWI 282
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 52/299 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK S +RG E + E ++L +V ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L +++ LSE+ A +I + + ++ +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
D+KP+N ++LDKN H+KL DFGL +ED +E ++I
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-----VEFKNIF--------------- 179
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 180 -------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 347 DDPRITCRKIVNWKTCLKFPEE--PKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
D + T I F EE + S+ A+D I LL ETR ++E HPW
Sbjct: 221 DTKQETLANIT--AVSYDFDEEFFSQTSELAKDFIRKLLVK-ETR-KRLTIQEALRHPW 275
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 138/309 (44%), Gaps = 60/309 (19%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E + IG G FG RL R K + E+ A+K +++ E + + + R+L
Sbjct: 18 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----RH 73
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+ L ++MEY GG++ + SED ARF+ + + + H
Sbjct: 74 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 133
Query: 226 NYVHRDIKPDNLILDKN--GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
HRD+K +N +LD + LK+ DFG K SS+L
Sbjct: 134 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQ---------------- 171
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYP 342
PK STVGT Y+APEVLLKK Y G D WS G +Y ML+G
Sbjct: 172 --PK---------------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 214
Query: 343 PFCSDDP------RITCRKIVNWKTCLKFPEEPKISDEARDLICHL-LCDVETRLGTRGV 395
PF +DP R T +I+N + + P+ IS E R LI + + D R+ +
Sbjct: 215 PF--EDPEEPKNFRKTIHRILNVQYAI--PDYVHISPECRHLISRIFVADPAKRI---SI 267
Query: 396 EELKEHPWF 404
E++ H WF
Sbjct: 268 PEIRNHEWF 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 138/309 (44%), Gaps = 60/309 (19%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E + IG G FG RL R K + E+ A+K +++ E + + + R+L
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSL----RH 74
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+ L ++MEY GG++ + SED ARF+ + + + H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 226 NYVHRDIKPDNLILDKN--GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
HRD+K +N +LD + LK+ DFG K SS+L
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVLHSQ---------------- 172
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYP 342
PK STVGT Y+APEVLLKK Y G D WS G +Y ML+G
Sbjct: 173 --PK---------------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 343 PFCSDDP------RITCRKIVNWKTCLKFPEEPKISDEARDLICHL-LCDVETRLGTRGV 395
PF +DP R T +I+N + + P+ IS E R LI + + D R+ +
Sbjct: 216 PF--EDPEEPKNFRKTIHRILNVQYAI--PDYVHISPECRHLISRIFVADPAKRI---SI 268
Query: 396 EELKEHPWF 404
E++ H WF
Sbjct: 269 PEIRNHEWF 277
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 52/299 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK S +RG E + E ++L +V ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L +++ LSE+ A +I + + ++ +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
D+KP+N ++LDKN H+KL DFGL +ED +E ++I
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-----VEFKNIF--------------- 179
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 180 -------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 347 DDPRITCRKIVNWKTCLKFPEE--PKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
D + T I + F EE S+ A+D I LL ETR ++E HPW
Sbjct: 221 DTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLLVK-ETR-KRLTIQEALRHPW 275
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 52/299 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK S +RG E + E ++L +V ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L +++ LSE+ A +I + + ++ +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
D+KP+N ++LDKN H+KL DFGL +ED +E ++I
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-----VEFKNIF--------------- 179
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 180 -------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 347 DDPRITCRKIVNWKTCLKFPEE--PKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
D + T I + F EE S+ A+D I LL ETR ++E HPW
Sbjct: 221 DTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLLVK-ETR-KRLTIQEALRHPW 275
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 146/316 (46%), Gaps = 60/316 (18%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEML--KRG-QVEHVRSERNLLAE 162
D +E +G G F VR CR K TG+ +A K +KK + +RG E + E N+L E
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 64
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
+ I+ L F++ + LI+E + GG++ L ++ L+ED A ++ + + +H +
Sbjct: 65 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 124
Query: 223 HQHNYVHRDIKPDN-LILDK---NGHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETV 276
H H D+KP+N ++LDK N +KL DFG+ +E +++ +I
Sbjct: 125 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF------------ 172
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
GT +++APE++ + G+E D WS+G I Y
Sbjct: 173 -----------------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYI 203
Query: 337 MLIGYPPFCSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLCDVETRLGT 392
+L G PF + + T I VN+ F EE S+ A+D I LL R T
Sbjct: 204 LLSGASPFLGETKQETLTNISAVNY----DFDEEYFSNTSELAKDFIRRLLVKDPKRRMT 259
Query: 393 RGVEELKEHPWFRGIQ 408
+ + EH W + I+
Sbjct: 260 --IAQSLEHSWIKAIR 273
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 112 bits (279), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 52/299 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK S +RG E + E ++L +V ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L +++ LSE+ A +I + + ++ +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
D+KP+N ++LDKN H+KL DFGL +ED +E ++I
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-----VEFKNIF--------------- 179
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 180 -------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 347 DDPRITCRKIVNWKTCLKFPEE--PKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
D + T I F EE + S+ A+D I LL ETR ++E HPW
Sbjct: 221 DTKQETLANIT--AVSYDFDEEFFSQTSELAKDFIRKLLVK-ETR-KRLTIQEALRHPW 275
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 143/299 (47%), Gaps = 52/299 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK S +RG E + E ++L +V ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L +++ LSE+ A +I + + ++ +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
D+KP+N ++LDKN H+KL DFGL +ED +E ++I
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-----VEFKNIF--------------- 179
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 180 -------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 347 DDPRITCRKIVNWKTCLKFPEE--PKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
D + T I + F EE S+ A+D I LL ETR ++E HPW
Sbjct: 221 DTKQETLANITS--VSYDFDEEFFSHTSELAKDFIRKLLVK-ETR-KRLTIQEALRHPW 275
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 143/299 (47%), Gaps = 52/299 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRGQV-EHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK S +RG E + E ++L +V I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L +++ LSE+ A +I + + ++ +H H
Sbjct: 80 LHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHF 139
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
D+KP+N ++LDKN H+KL DFGL +ED +E ++I
Sbjct: 140 DLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDG-----VEFKNIF--------------- 179
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 180 -------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLG 220
Query: 347 DDPRITCRKIVNWKTCLKFPEE--PKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
D + T I F EE + S+ A+D I LL ETR ++E HPW
Sbjct: 221 DTKQETLANIT--AVSYDFDEEFFSQTSELAKDFIRKLLVK-ETR-KRLTIQEALRHPW 275
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 56/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVE-----HVRSERNLL 160
D++ +G GA GEV+L + T + A+K + K + E +V +E +L
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 68
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+++ CI+++ +F D++ Y+++E + GG++ ++ L E + Y + +LA+
Sbjct: 69 KKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 127
Query: 221 SIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+H++ +HRD+KP+N++L +++ +K++DFG +S IL E
Sbjct: 128 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--------HSKILGET---------- 169
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK---KGYGMECDWWSLGAIM 334
+L + GT Y+APEVL+ GY D WSLG I+
Sbjct: 170 ---------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 208
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLL-CDVETRLGT 392
+ L GYPPF +++ + + PE ++S++A DL+ LL D + R T
Sbjct: 209 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 268
Query: 393 RGVEELKEHPWFR 405
EE HPW +
Sbjct: 269 ---EEALRHPWLQ 278
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 56/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVE-----HVRSERNLL 160
D++ +G GA GEV+L + T + A+K + K + E +V +E +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+++ CI+++ +F D++ Y+++E + GG++ ++ L E + Y + +LA+
Sbjct: 70 KKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 221 SIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+H++ +HRD+KP+N++L +++ +K++DFG +S IL E
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--------HSKILGET---------- 170
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK---KGYGMECDWWSLGAIM 334
+L + GT Y+APEVL+ GY D WSLG I+
Sbjct: 171 ---------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLL-CDVETRLGT 392
+ L GYPPF +++ + + PE ++S++A DL+ LL D + R T
Sbjct: 210 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Query: 393 RGVEELKEHPWFR 405
EE HPW +
Sbjct: 270 ---EEALRHPWLQ 279
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 111 bits (278), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 56/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVE-----HVRSERNLL 160
D++ +G GA GEV+L + T + A+K + K + E +V +E +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+++ CI+++ +F D++ Y+++E + GG++ ++ L E + Y + +LA+
Sbjct: 70 KKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 221 SIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+H++ +HRD+KP+N++L +++ +K++DFG +S IL E
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--------HSKILGET---------- 170
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK---KGYGMECDWWSLGAIM 334
+L + GT Y+APEVL+ GY D WSLG I+
Sbjct: 171 ---------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLL-CDVETRLGT 392
+ L GYPPF +++ + + PE ++S++A DL+ LL D + R T
Sbjct: 210 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Query: 393 RGVEELKEHPWFR 405
EE HPW +
Sbjct: 270 ---EEALRHPWLQ 279
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 56/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVE-----HVRSERNLL 160
D++ +G GA GEV+L + T + A+K + K + E +V +E +L
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 69
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+++ CI+++ +F D++ Y+++E + GG++ ++ L E + Y + +LA+
Sbjct: 70 KKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 128
Query: 221 SIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+H++ +HRD+KP+N++L +++ +K++DFG +S IL E
Sbjct: 129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--------HSKILGET---------- 170
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK---KGYGMECDWWSLGAIM 334
+L + GT Y+APEVL+ GY D WSLG I+
Sbjct: 171 ---------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 209
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLL-CDVETRLGT 392
+ L GYPPF +++ + + PE ++S++A DL+ LL D + R T
Sbjct: 210 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Query: 393 RGVEELKEHPWFR 405
EE HPW +
Sbjct: 270 ---EEALRHPWLQ 279
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 150/313 (47%), Gaps = 56/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVE-----HVRSERNLL 160
D++ +G GA GEV+L + T + A+K + K + E +V +E +L
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEIL 75
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+++ CI+++ +F D++ Y+++E + GG++ ++ L E + Y + +LA+
Sbjct: 76 KKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 134
Query: 221 SIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+H++ +HRD+KP+N++L +++ +K++DFG +S IL E
Sbjct: 135 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--------HSKILGET---------- 176
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK---KGYGMECDWWSLGAIM 334
+L + GT Y+APEVL+ GY D WSLG I+
Sbjct: 177 ---------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 215
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLL-CDVETRLGT 392
+ L GYPPF +++ + + PE ++S++A DL+ LL D + R T
Sbjct: 216 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 275
Query: 393 RGVEELKEHPWFR 405
EE HPW +
Sbjct: 276 ---EEALRHPWLQ 285
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 137/309 (44%), Gaps = 60/309 (19%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E + IG G FG RL R K E+ A+K +++ E + + + R+L
Sbjct: 19 DRYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSL----RH 74
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+ L ++MEY GG++ + SED ARF+ + + + H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAM 134
Query: 226 NYVHRDIKPDNLILDKN--GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
HRD+K +N +LD + LK++DFG K +S+L
Sbjct: 135 QVAHRDLKLENTLLDGSPAPRLKIADFGYSK------ASVLHSQ---------------- 172
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYP 342
PK S VGT Y+APEVLLKK Y G D WS G +Y ML+G
Sbjct: 173 --PK---------------SAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 343 PFCSDDP------RITCRKIVNWKTCLKFPEEPKISDEARDLICHL-LCDVETRLGTRGV 395
PF +DP R T +I+N + + P+ IS E R LI + + D R+ +
Sbjct: 216 PF--EDPEEPKNFRKTIHRILNVQYAI--PDYVHISPECRHLISRIFVADPAKRI---SI 268
Query: 396 EELKEHPWF 404
E++ H WF
Sbjct: 269 PEIRNHEWF 277
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 148/317 (46%), Gaps = 62/317 (19%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEML--KRG-QVEHVRSERNLLAE 162
D +E +G G F VR CR K TG+ +A K +KK + +RG E + E N+L E
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILRE 85
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
+ I+ L F++ + LI+E + GG++ L ++ L+ED A ++ + + +H +
Sbjct: 86 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 145
Query: 223 HQHNYVHRDIKPDN-LILDK---NGHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETV 276
H H D+KP+N ++LDK N +KL DFG+ +E +++ +I
Sbjct: 146 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF------------ 193
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
GT +++APE++ + G+E D WS+G I Y
Sbjct: 194 -----------------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYI 224
Query: 337 MLIGYPPFCSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLG 391
+L G PF + + T I VN+ F EE S+ A+D I LL D + R+
Sbjct: 225 LLSGASPFLGETKQETLTNISAVNY----DFDEEYFSNTSELAKDFIRRLLVKDPKRRM- 279
Query: 392 TRGVEELKEHPWFRGIQ 408
+ + EH W + I+
Sbjct: 280 --XIAQSLEHSWIKAIR 294
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 129/281 (45%), Gaps = 43/281 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D+++ +GKGAF VR C KTTG FA K + ++ R + + E + ++
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQH 64
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+L S Q+ F YL+ + + GG++ ++ + SE A I + + +I H +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 226 NYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHR++KP+NL+L K +KL+DFGL + D SEA
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND------------------SEA--- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
W + GT Y++PEVL K Y D W+ G I+Y +L+GYP
Sbjct: 164 ----------W--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL 383
PF +D +I PE ++ EA+ LI +L
Sbjct: 206 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 129/281 (45%), Gaps = 43/281 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D+++ +GKGAF VR C KTTG FA K + ++ R + + E + ++
Sbjct: 6 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQH 64
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+L S Q+ F YL+ + + GG++ ++ + SE A I + + +I H +
Sbjct: 65 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 124
Query: 226 NYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHR++KP+NL+L K +KL+DFGL + D SEA
Sbjct: 125 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND------------------SEA--- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
W + GT Y++PEVL K Y D W+ G I+Y +L+GYP
Sbjct: 164 ----------W--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 205
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL 383
PF +D +I PE ++ EA+ LI +L
Sbjct: 206 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 246
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 129/281 (45%), Gaps = 43/281 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D+++ +GKGAF VR C KTTG FA K + ++ R + + E + ++
Sbjct: 5 DNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DFQKLEREARICRKLQH 63
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+L S Q+ F YL+ + + GG++ ++ + SE A I + + +I H +
Sbjct: 64 PNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN 123
Query: 226 NYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHR++KP+NL+L K +KL+DFGL + D SEA
Sbjct: 124 GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND------------------SEA--- 162
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
W + GT Y++PEVL K Y D W+ G I+Y +L+GYP
Sbjct: 163 ----------W--------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYP 204
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL 383
PF +D +I PE ++ EA+ LI +L
Sbjct: 205 PFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSML 245
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 110 bits (274), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 135/302 (44%), Gaps = 44/302 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
++++ +GKGAF VR C G+ +A + ++ R + + E + +
Sbjct: 11 EEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDH-QKLEREARICRLLKH 69
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+L S + YLI + + GG++ ++ + SE A I + + A+ HQ
Sbjct: 70 PNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 129
Query: 226 NYVHRDIKPDNLILD---KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHR++KP+NL+L K +KL+DFGL E EG+
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGL-----------------------AIEVEGE 166
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
Q W + GT Y++PEVL K YG D W+ G I+Y +L+GYP
Sbjct: 167 -------QQAW--------FGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYP 211
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHP 402
PF +D ++I PE ++ EA+DLI +L ++ T E LK HP
Sbjct: 212 PFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRIT-AAEALK-HP 269
Query: 403 WF 404
W
Sbjct: 270 WI 271
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 139/325 (42%), Gaps = 58/325 (17%)
Query: 97 RLQRRKIGI-DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
+L R I D +E IG G++ + C K T FA+K + KS KR E +
Sbjct: 12 QLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKS---KRDPTEEIEI 68
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
LL I+ L + D ++Y++ E GG+++ ++R+ SE A +
Sbjct: 69 ---LLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTI 125
Query: 216 VLAIHSIHQHNYVHRDIKPDNLI-LDKNGH---LKLSDFGLCKPLEDKYSSILLEDEDII 271
+ +H VHRD+KP N++ +D++G+ +++ DFG K L
Sbjct: 126 TKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL--------------- 170
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
R L + T +++APEVL ++GY CD WSLG
Sbjct: 171 -----------------------RAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLG 207
Query: 332 AIMYEMLIGYPPFCS---DDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVE 387
++Y L GY PF + D P +I + K L +SD A+DL+ L D
Sbjct: 208 VLLYTXLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPH 267
Query: 388 TRLGTRGVEELKEHPWFRGIQWDKL 412
RL V HPW + WD+L
Sbjct: 268 QRLTAALV---LRHPWI--VHWDQL 287
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 150/313 (47%), Gaps = 56/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVE-----HVRSERNLL 160
D++ +G GA GEV+L + T + A++ + K + E +V +E +L
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 208
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+++ CI+++ +F D++ Y+++E + GG++ ++ L E + Y + +LA+
Sbjct: 209 KKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 267
Query: 221 SIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+H++ +HRD+KP+N++L +++ +K++DFG +S IL E
Sbjct: 268 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--------HSKILGET---------- 309
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK---KGYGMECDWWSLGAIM 334
+L + GT Y+APEVL+ GY D WSLG I+
Sbjct: 310 ---------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 348
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLL-CDVETRLGT 392
+ L GYPPF +++ + + PE ++S++A DL+ LL D + R T
Sbjct: 349 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 408
Query: 393 RGVEELKEHPWFR 405
EE HPW +
Sbjct: 409 ---EEALRHPWLQ 418
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 137/309 (44%), Gaps = 60/309 (19%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E + IG G FG RL R K + E+ A+K +++ E + + + R+L
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----RH 74
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+ L ++MEY GG++ + SED ARF+ + + + H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 226 NYVHRDIKPDNLILDKN--GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
HRD+K +N +LD + LK+ FG K SS+L
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK------SSVLHSQ---------------- 172
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYP 342
PK STVGT Y+APEVLLKK Y G D WS G +Y ML+G
Sbjct: 173 --PK---------------STVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 343 PFCSDDP------RITCRKIVNWKTCLKFPEEPKISDEARDLICHL-LCDVETRLGTRGV 395
PF +DP R T +I+N + + P+ IS E R LI + + D R+ +
Sbjct: 216 PF--EDPEEPKNFRKTIHRILNVQYAI--PDYVHISPECRHLISRIFVADPAKRI---SI 268
Query: 396 EELKEHPWF 404
E++ H WF
Sbjct: 269 PEIRNHEWF 277
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 150/313 (47%), Gaps = 56/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVE-----HVRSERNLL 160
D++ +G GA GEV+L + T + A++ + K + E +V +E +L
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEIL 194
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
+++ CI+++ +F D++ Y+++E + GG++ ++ L E + Y + +LA+
Sbjct: 195 KKLNHPCIIKI-KNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQ 253
Query: 221 SIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+H++ +HRD+KP+N++L +++ +K++DFG +S IL E
Sbjct: 254 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFG--------HSKILGET---------- 295
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK---KGYGMECDWWSLGAIM 334
+L + GT Y+APEVL+ GY D WSLG I+
Sbjct: 296 ---------------------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVIL 334
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEE-PKISDEARDLICHLL-CDVETRLGT 392
+ L GYPPF +++ + + PE ++S++A DL+ LL D + R T
Sbjct: 335 FICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 394
Query: 393 RGVEELKEHPWFR 405
EE HPW +
Sbjct: 395 ---EEALRHPWLQ 404
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 139/294 (47%), Gaps = 49/294 (16%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+GA G V TG+ A++++ + K+ E + +E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
S+ D L+++MEYL GG +T ++ E + E E + A+ +H + +HRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGS-LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 234 PDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQW 293
DN++L +G +KL+DFG C + +Q
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITP--------------------------------EQS 171
Query: 294 KRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP-RIT 352
KR+ + VGT +MAPEV+ +K YG + D WSLG + EM+ G PP+ +++P R
Sbjct: 172 KRS------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFR 405
N L+ PE K+S RD + L DVE R + EL +H + +
Sbjct: 226 YLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKRGSAK---ELLQHQFLK 274
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 49/294 (16%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+GA G V TG+ A++++ + K+ E + +E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
S+ D L+++MEYL GG +T ++ E + E E + A+ +H + +HRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGS-LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 234 PDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQW 293
DN++L +G +KL+DFG C + +Q
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITP--------------------------------EQS 171
Query: 294 KRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP-RIT 352
KR+ VGT +MAPEV+ +K YG + D WSLG + EM+ G PP+ +++P R
Sbjct: 172 KRSE------MVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFR 405
N L+ PE K+S RD + L DVE R + EL +H + +
Sbjct: 226 YLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKRGSAK---ELLQHQFLK 274
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 159/364 (43%), Gaps = 67/364 (18%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG--QVEHVRSERNLLAEV 163
D +E +IGKGAF VR C + TG+ FA+K + ++ E ++ E ++ +
Sbjct: 24 DVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 164 DSRCIVQLFYSFQDSDFLYLIMEYLPGGDI-MTLLMRED---ILSEDVARFYIAESVLAI 219
IV+L ++ LY++ E++ G D+ ++ R D + SE VA Y+ + + A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 220 HSIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
H +N +HRD+KP+N++L + + +KL DFG+ +I L + ++
Sbjct: 144 RYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGV---------AIQLGESGLV----- 189
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
A VGT +MAPEV+ ++ YG D W G I++
Sbjct: 190 ------------------------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 225
Query: 337 MLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICH-LLCDVETRLGTRGV 395
+L G PF R+ I+ K + + IS+ A+DL+ L+ D R+ V
Sbjct: 226 LLSGCLPFYGTKERLF-EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI---TV 281
Query: 396 EELKEHPWFR-------------GIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPP 442
E HPW + ++ + + K V + + F F PP
Sbjct: 282 YEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSF--YGDPP 339
Query: 443 SEIP 446
E+P
Sbjct: 340 EELP 343
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 89/315 (28%), Positives = 146/315 (46%), Gaps = 62/315 (19%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEML--KRG-QVEHVRSERNLLAE 162
D +E +G G F VR CR K TG+ +A K +KK + +RG E + E N+L E
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILRE 71
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
+ I+ L F++ + LI+E + GG++ L ++ L+ED A ++ + + +H +
Sbjct: 72 IRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYL 131
Query: 223 HQHNYVHRDIKPDN-LILDK---NGHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETV 276
H H D+KP+N ++LDK N +KL DFG+ +E +++ +I
Sbjct: 132 HSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIF------------ 179
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
GT +++APE++ + G+E D WS+G I Y
Sbjct: 180 -----------------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYI 210
Query: 337 MLIGYPPFCSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLG 391
+L G PF + + T I VN+ F EE S+ A+D I LL D + R+
Sbjct: 211 LLSGASPFLGETKQETLTNISAVNY----DFDEEYFSNTSELAKDFIRRLLVKDPKRRM- 265
Query: 392 TRGVEELKEHPWFRG 406
+ + EH W +
Sbjct: 266 --XIAQSLEHSWIKA 278
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 108 bits (269), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 49/294 (16%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+GA G V TG+ A++++ + K+ E + +E ++ E + IV
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 84
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
S+ D L+++MEYL GG +T ++ E + E E + A+ +H + +HRDIK
Sbjct: 85 SYLVGDELWVVMEYLAGGS-LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 234 PDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQW 293
DN++L +G +KL+DFG C + +Q
Sbjct: 144 SDNILLGMDGSVKLTDFGFCAQITP--------------------------------EQS 171
Query: 294 KRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP-RIT 352
KR+ VGT +MAPEV+ +K YG + D WSLG + EM+ G PP+ +++P R
Sbjct: 172 KRS------XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 225
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFR 405
N L+ PE K+S RD + L DVE R + EL +H + +
Sbjct: 226 YLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRGSAK---ELLQHQFLK 274
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 137/309 (44%), Gaps = 60/309 (19%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E + IG G FG RL R K + E+ A+K +++ E + + + R+L
Sbjct: 19 DRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSL----RH 74
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+ L ++MEY GG++ + SED ARF+ + + + H
Sbjct: 75 PNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAM 134
Query: 226 NYVHRDIKPDNLILDKN--GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
HRD+K +N +LD + LK+ FG K SS+L
Sbjct: 135 QVCHRDLKLENTLLDGSPAPRLKICAFGYSK------SSVL------------------H 170
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYP 342
PK+ TVGT Y+APEVLLKK Y G D WS G +Y ML+G
Sbjct: 171 SQPKD---------------TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 343 PFCSDDP------RITCRKIVNWKTCLKFPEEPKISDEARDLICHL-LCDVETRLGTRGV 395
PF +DP R T +I+N + + P+ IS E R LI + + D R+ +
Sbjct: 216 PF--EDPEEPKNFRKTIHRILNVQYAI--PDYVHISPECRHLISRIFVADPAKRI---SI 268
Query: 396 EELKEHPWF 404
E++ H WF
Sbjct: 269 PEIRNHEWF 277
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 138/294 (46%), Gaps = 49/294 (16%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+GA G V TG+ A++++ + K+ E + +E ++ E + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
S+ D L+++MEYL GG +T ++ E + E E + A+ +H + +HRDIK
Sbjct: 86 SYLVGDELWVVMEYLAGGS-LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIK 144
Query: 234 PDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQW 293
DN++L +G +KL+DFG C + +Q
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITP--------------------------------EQS 172
Query: 294 KRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP-RIT 352
KR+ VGT +MAPEV+ +K YG + D WSLG + EM+ G PP+ +++P R
Sbjct: 173 KRS------XMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFR 405
N L+ PE K+S RD + L DVE R + EL +H + +
Sbjct: 227 YLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRGSAK---ELIQHQFLK 275
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 141/313 (45%), Gaps = 54/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMK--KLKKSEMLKRGQVEHVR----SERNL 159
+++E ++G+G VR C K T + +A+K + +V+ +R E ++
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 160 LAEVDSR-CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
L +V I+QL +++ + F +L+ + + G++ L + LSE R + +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
I ++H+ N VHRD+KP+N++LD + ++KL+DFG L+
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD--------------------- 175
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL------LKKGYGMECDWWSLGA 332
P E+L+ S GT Y+APE++ GYG E D WS G
Sbjct: 176 -------PGEKLR-----------SVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 333 IMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT 392
IMY +L G PPF + R I++ PE SD +DL+ L + T
Sbjct: 218 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT 277
Query: 393 RGVEELKEHPWFR 405
EE HP+F+
Sbjct: 278 --AEEALAHPFFQ 288
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 53/307 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D ++ L +G GAFG V C K TG +F K + L + V++E +++ ++
Sbjct: 51 DYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYT---VKNEISIMNQLHH 107
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSIHQ 224
++ L +F+D + LI+E+L GG++ + ED +SE Y+ ++ + +H+
Sbjct: 108 PKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHE 167
Query: 225 HNYVHRDIKPDNLILD--KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H+ VH DIKP+N++ + K +K+ DFGL L
Sbjct: 168 HSIVHLDIKPENIMCETKKASSVKIIDFGLATKL-------------------------- 201
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
N + T T ++ APE++ ++ G D W++G + Y +L G
Sbjct: 202 -------------NPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLS 248
Query: 343 PFCSDDPRITCRKIVNWKTC-LKFPEEP--KISDEARDLICHLLCDVETRLGTRGVEELK 399
PF +D T + N K C +F E+ +S EA+D I +LL + T V +
Sbjct: 249 PFAGEDDLETLQ---NVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLT--VHDAL 303
Query: 400 EHPWFRG 406
EHPW +G
Sbjct: 304 EHPWLKG 310
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 139/294 (47%), Gaps = 49/294 (16%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+GA G V TG+ A++++ + K+ E + +E ++ E + IV
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKK---ELIINEILVMRENKNPNIVNYLD 85
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
S+ D L+++MEYL GG +T ++ E + E E + A+ +H + +HR+IK
Sbjct: 86 SYLVGDELWVVMEYLAGGS-LTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIK 144
Query: 234 PDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQW 293
DN++L +G +KL+DFG C + +Q
Sbjct: 145 SDNILLGMDGSVKLTDFGFCAQITP--------------------------------EQS 172
Query: 294 KRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP-RIT 352
KR+ + VGT +MAPEV+ +K YG + D WSLG + EM+ G PP+ +++P R
Sbjct: 173 KRS------TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRAL 226
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFR 405
N L+ PE K+S RD + L DVE R + EL +H + +
Sbjct: 227 YLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRGSAK---ELIQHQFLK 275
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 49/303 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I +++ + +G+G+FG+V+L TTG+ A+K + K + K + E + L +
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 71
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
I++L+ + D + +++EY G ++ +++ D +SE AR + + + A+ H+
Sbjct: 72 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 130
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H VHRD+KP+NL+LD++ ++K++DFGL + D G ++
Sbjct: 131 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD----------------------GNFL 168
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
++ G+ +Y APEV+ K Y G E D WS G I+Y ML P
Sbjct: 169 K-----------------TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPK-ISDEARDLICHLLCDVETRLGTRGVEELKEHP 402
F + + + I N L PK +S A LI +L + L + E+ +
Sbjct: 212 FDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLIKRML--IVNPLNRISIHEIMQDD 264
Query: 403 WFR 405
WF+
Sbjct: 265 WFK 267
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/309 (30%), Positives = 140/309 (45%), Gaps = 60/309 (19%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D ++ + IG G FG RL R K T E+ A+K +++ + + + R+L
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHP--- 76
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
IV+ L +IMEY GG++ + SED ARF+ + + + H
Sbjct: 77 -NIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM 135
Query: 226 NYVHRDIKPDNLILDKN--GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
HRD+K +N +LD + LK+ DFG K SS+L
Sbjct: 136 QICHRDLKLENTLLDGSPAPRLKICDFGYSK------SSVL------------------H 171
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYP 342
PK STVGT Y+APEVLL++ Y G D WS G +Y ML+G
Sbjct: 172 SQPK---------------STVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAY 216
Query: 343 PFCSDDP------RITCRKIVNWKTCLKFPEEPKISDEARDLICHL-LCDVETRLGTRGV 395
PF +DP R T ++I++ K + P++ +IS E LI + + D TR+ +
Sbjct: 217 PF--EDPEEPRDYRKTIQRILSVKYSI--PDDIRISPECCHLISRIFVADPATRI---SI 269
Query: 396 EELKEHPWF 404
E+K H WF
Sbjct: 270 PEIKTHSWF 278
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 49/303 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I +++ + +G+G+FG+V+L TTG+ A+K + K + K + E + L +
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 72
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
I++L+ + D + +++EY G ++ +++ D +SE AR + + + A+ H+
Sbjct: 73 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 131
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H VHRD+KP+NL+LD++ ++K++DFGL + D G ++
Sbjct: 132 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD----------------------GNFL 169
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
++ G+ +Y APEV+ K Y G E D WS G I+Y ML P
Sbjct: 170 K-----------------TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPK-ISDEARDLICHLLCDVETRLGTRGVEELKEHP 402
F + + + I N L PK +S A LI +L + L + E+ +
Sbjct: 213 FDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLIKRML--IVNPLNRISIHEIMQDD 265
Query: 403 WFR 405
WF+
Sbjct: 266 WFK 268
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 49/303 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I +++ + +G+G+FG+V+L TTG+ A+K + K + K + E + L +
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 62
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
I++L+ + D + +++EY G ++ +++ D +SE AR + + + A+ H+
Sbjct: 63 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 121
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H VHRD+KP+NL+LD++ ++K++DFGL + D G ++
Sbjct: 122 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD----------------------GNFL 159
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
++ G+ +Y APEV+ K Y G E D WS G I+Y ML P
Sbjct: 160 K-----------------TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPK-ISDEARDLICHLLCDVETRLGTRGVEELKEHP 402
F + + + I N L PK +S A LI +L + L + E+ +
Sbjct: 203 FDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLIKRML--IVNPLNRISIHEIMQDD 255
Query: 403 WFR 405
WF+
Sbjct: 256 WFK 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 144/303 (47%), Gaps = 49/303 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I +++ + +G+G+FG+V+L TTG+ A+K + K + K + E + L +
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR 66
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
I++L+ + D + +++EY G ++ +++ D +SE AR + + + A+ H+
Sbjct: 67 HPHIIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHR 125
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H VHRD+KP+NL+LD++ ++K++DFGL + D G ++
Sbjct: 126 HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD----------------------GNFL 163
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
++ G+ +Y APEV+ K Y G E D WS G I+Y ML P
Sbjct: 164 K-----------------TSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPK-ISDEARDLICHLLCDVETRLGTRGVEELKEHP 402
F + + + I N L PK +S A LI +L + L + E+ +
Sbjct: 207 FDDESIPVLFKNISNGVYTL-----PKFLSPGAAGLIKRML--IVNPLNRISIHEIMQDD 259
Query: 403 WFR 405
WF+
Sbjct: 260 WFK 262
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 54/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMK--KLKKSEMLKRGQVEHVR----SERNL 159
+++E ++G+G VR C K T + +A+K + +V+ +R E ++
Sbjct: 17 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 76
Query: 160 LAEVDSR-CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
L +V I+QL +++ + F +L+ + + G++ L + LSE R + +
Sbjct: 77 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 136
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
I ++H+ N VHRD+KP+N++LD + ++KL+DFG L+
Sbjct: 137 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD--------------------- 175
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL------LKKGYGMECDWWSLGA 332
P E+L++ GT Y+APE++ GYG E D WS G
Sbjct: 176 -------PGEKLRE-----------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 217
Query: 333 IMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT 392
IMY +L G PPF + R I++ PE SD +DL+ L + T
Sbjct: 218 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT 277
Query: 393 RGVEELKEHPWFR 405
EE HP+F+
Sbjct: 278 --AEEALAHPFFQ 288
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 141/313 (45%), Gaps = 54/313 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMK--KLKKSEMLKRGQVEHVR----SERNL 159
+++E ++G+G VR C K T + +A+K + +V+ +R E ++
Sbjct: 4 ENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDI 63
Query: 160 LAEVDSR-CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
L +V I+QL +++ + F +L+ + + G++ L + LSE R + +
Sbjct: 64 LRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEV 123
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
I ++H+ N VHRD+KP+N++LD + ++KL+DFG L+
Sbjct: 124 ICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLD--------------------- 162
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL------LKKGYGMECDWWSLGA 332
P E+L++ GT Y+APE++ GYG E D WS G
Sbjct: 163 -------PGEKLRE-----------VCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGV 204
Query: 333 IMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT 392
IMY +L G PPF + R I++ PE SD +DL+ L + T
Sbjct: 205 IMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYT 264
Query: 393 RGVEELKEHPWFR 405
EE HP+F+
Sbjct: 265 --AEEALAHPFFQ 275
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 55/290 (18%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+D+E L IG G++G + R K+ G+I K+L M + + + + SE NLL E+
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKH 64
Query: 166 RCIVQLFYSFQD--SDFLYLIMEYLPGGDIMTLLMR----EDILSEDVARFYIAESVLAI 219
IV+ + D + LY++MEY GGD+ +++ + L E+ + + LA+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 220 HSIHQ-----HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
H+ H +HRD+KP N+ LD ++KL DFGL + I+N +
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR---------------ILNHD 169
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIM 334
T + A + VGT YM+PE + + Y + D WSLG ++
Sbjct: 170 T-----------------------SFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 206
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEP-KISDEARDLICHLL 383
YE+ PPF + + KI KF P + SDE ++I +L
Sbjct: 207 YELCALMPPFTAFSQKELAGKIREG----KFRRIPYRYSDELNEIITRML 252
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 49/304 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D ++ +G GAFG V + TG FA K + + E VR E ++ +
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---ETVRKEIQTMSVLR 106
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRE-DILSEDVARFYIAESVLAIHSIH 223
+V L +F+D + + +I E++ GG++ + E + +SED A Y+ + + +H
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 166
Query: 224 QHNYVHRDIKPDNLIL--DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
++NYVH D+KP+N++ ++ LKL DFGL L+
Sbjct: 167 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD------------------------ 202
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
PK+ ++ T GT ++ APEV K G D WS+G + Y +L G
Sbjct: 203 ----PKQSVK-----------VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 247
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICH-LLCDVETRLGTRGVEELKE 400
PF ++ T R + + + IS++ +D I LL D TR+ + + E
Sbjct: 248 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRM---TIHQALE 304
Query: 401 HPWF 404
HPW
Sbjct: 305 HPWL 308
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 56/298 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+G++GEV++ K T A KK+ K + V+ + E ++ +D I++L+
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYE 90
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
+F+D+ +YL+ME GG++ ++ + + E A + + + A+ H+ N HRD+K
Sbjct: 91 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 150
Query: 234 PDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERL 290
P+N + + LKL DFGL R
Sbjct: 151 PENFLFLTDSPDSPLKLIDFGLAA----------------------------------RF 176
Query: 291 QQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPR 350
+ K R + VGT Y++P+V L+ YG ECD WS G +MY +L GYPPF +
Sbjct: 177 KPGKMMR-----TKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDX 230
Query: 351 ITCRKIVNWKTCLKFPEEP--KISDEARDLICHLLCDVETRLGTRGVEELK--EHPWF 404
KI + FPE+ +S +A LI LL T+ + + L+ EH WF
Sbjct: 231 EVMLKIR--EGTFTFPEKDWLNVSPQAESLIRRLL----TKSPKQRITSLQALEHEWF 282
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 134/290 (46%), Gaps = 55/290 (18%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+D+E L IG G++G + R K+ G+I K+L M + + + + SE NLL E+
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKH 64
Query: 166 RCIVQLFYSFQD--SDFLYLIMEYLPGGDIMTLLMR----EDILSEDVARFYIAESVLAI 219
IV+ + D + LY++MEY GGD+ +++ + L E+ + + LA+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 220 HSIHQ-----HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
H+ H +HRD+KP N+ LD ++KL DFGL + I+N +
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR---------------ILNHD 169
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIM 334
T + A + VGT YM+PE + + Y + D WSLG ++
Sbjct: 170 T-----------------------SFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 206
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEP-KISDEARDLICHLL 383
YE+ PPF + + KI KF P + SDE ++I +L
Sbjct: 207 YELCALMPPFTAFSQKELAGKIREG----KFRRIPYRYSDELNEIITRML 252
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 138/298 (46%), Gaps = 56/298 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+G++GEV++ K T A KK+ K + V+ + E ++ +D I++L+
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV---EDVDRFKQEIEIMKSLDHPNIIRLYE 73
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
+F+D+ +YL+ME GG++ ++ + + E A + + + A+ H+ N HRD+K
Sbjct: 74 TFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLK 133
Query: 234 PDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERL 290
P+N + + LKL DFGL R
Sbjct: 134 PENFLFLTDSPDSPLKLIDFGLAA----------------------------------RF 159
Query: 291 QQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPR 350
+ K R + VGT Y++P+V L+ YG ECD WS G +MY +L GYPPF +
Sbjct: 160 KPGKMMR-----TKVGTPYYVSPQV-LEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDX 213
Query: 351 ITCRKIVNWKTCLKFPEEP--KISDEARDLICHLLCDVETRLGTRGVEELK--EHPWF 404
KI + FPE+ +S +A LI LL T+ + + L+ EH WF
Sbjct: 214 EVMLKIR--EGTFTFPEKDWLNVSPQAESLIRRLL----TKSPKQRITSLQALEHEWF 265
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 150/323 (46%), Gaps = 51/323 (15%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
++G G FG+V C TG A K +K M + E V++E +++ ++D ++QL+
Sbjct: 96 ILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK---EEVKNEISVMNQLDHANLIQLY 152
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSIHQHNYVHRD 231
+F+ + + L+MEY+ GG++ ++ E L+E ++ + I +HQ +H D
Sbjct: 153 DAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLD 212
Query: 232 IKPDNLI-LDKNG-HLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
+KP+N++ ++++ +K+ DFGL + +Y P+E+
Sbjct: 213 LKPENILCVNRDAKQIKIIDFGLAR----RYK------------------------PREK 244
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP 349
L+ GT +++APEV+ D WS+G I Y +L G PF D+
Sbjct: 245 LK-----------VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND 293
Query: 350 RITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQW 409
T I+ + L+ E IS+EA++ I LL E E LK HPW
Sbjct: 294 AETLNNILACRWDLEDEEFQDISEEAKEFISKLLIK-EKSWRISASEALK-HPWLSD--- 348
Query: 410 DKLYEMEAAYKPTVNGELDTQNF 432
KL+ +A K G D Q+F
Sbjct: 349 HKLHSRLSAQKKKNRGS-DAQDF 370
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 137/304 (45%), Gaps = 49/304 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D ++ +G GAFG V + TG FA K + + E VR E ++ +
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK---ETVRKEIQTMSVLR 212
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRE-DILSEDVARFYIAESVLAIHSIH 223
+V L +F+D + + +I E++ GG++ + E + +SED A Y+ + + +H
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH 272
Query: 224 QHNYVHRDIKPDNLIL--DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
++NYVH D+KP+N++ ++ LKL DFGL L+
Sbjct: 273 ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLD------------------------ 308
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
PK+ ++ T GT ++ APEV K G D WS+G + Y +L G
Sbjct: 309 ----PKQSVK-----------VTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGL 353
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICH-LLCDVETRLGTRGVEELKE 400
PF ++ T R + + + IS++ +D I LL D TR+ + + E
Sbjct: 354 SPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRM---TIHQALE 410
Query: 401 HPWF 404
HPW
Sbjct: 411 HPWL 414
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 147/329 (44%), Gaps = 55/329 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ L IGKG F +V+L R TG A+K + K++ L ++ + E ++ ++
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILN 69
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYLIMEY GG++ L+ + E AR + V A+ HQ
Sbjct: 70 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 129
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ TV +
Sbjct: 130 KRIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTVGGKLDTF- 170
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
G+ Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 171 --------------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F + + +++ K + F +S + +L+ L + GT +E++ + W
Sbjct: 211 FDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGT--LEQIMKDRW 264
Query: 404 FR-GIQWDKLYEMEAAYKPTVNGELDTQN 431
G + D+L KP V ELD +
Sbjct: 265 INAGHEEDEL-------KPFVEPELDISD 286
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 142/306 (46%), Gaps = 52/306 (16%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D FE + +G+GA V C+ K T + +A+K LKK+ K VR+E +L +
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKI-----VRTEIGVLLRLSH 107
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH 225
I++L F+ + L++E + GG++ ++ + SE A + + + A+ +H++
Sbjct: 108 PNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN 167
Query: 226 NYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHRD+KP+NL+ + LK++DFGL K +E
Sbjct: 168 GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVE------------------------- 202
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
+ L + GT Y APE+L YG E D WS+G I Y +L G+
Sbjct: 203 --------------HQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFE 248
Query: 343 PFCSD-DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLC-DVETRLGTRGVEELKE 400
PF + + R+I+N + P ++S A+DL+ L+ D + RL T + +
Sbjct: 249 PFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTF---QALQ 305
Query: 401 HPWFRG 406
HPW G
Sbjct: 306 HPWVTG 311
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 105 bits (261), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 55/290 (18%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+D+E L IG G++G + R K+ G+I K+L M + + + + SE NLL E+
Sbjct: 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTE-AEKQMLVSEVNLLRELKH 64
Query: 166 RCIVQLFYSFQD--SDFLYLIMEYLPGGDIMTLLMR----EDILSEDVARFYIAESVLAI 219
IV+ + D + LY++MEY GGD+ +++ + L E+ + + LA+
Sbjct: 65 PNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLAL 124
Query: 220 HSIHQ-----HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
H+ H +HRD+KP N+ LD ++KL DFGL + IL DED
Sbjct: 125 KECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR--------ILNHDED----- 171
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIM 334
A VGT YM+PE + + Y + D WSLG ++
Sbjct: 172 -------------------------FAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 206
Query: 335 YEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEP-KISDEARDLICHLL 383
YE+ PPF + + KI KF P + SDE ++I +L
Sbjct: 207 YELCALMPPFTAFSQKELAGKIREG----KFRRIPYRYSDELNEIITRML 252
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 48/300 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D+F + IG+G+ G V + +++G++ A+KK+ ++ K+ + E + +E ++ +
Sbjct: 153 LDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQ 206
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+++ S+ D L+++ME+L GG + ++ + E +A +A + A+ +H
Sbjct: 207 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHA 265
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRDIK D+++L +G +KLSDFG C A+
Sbjct: 266 QGVIHRDIKSDSILLTHDGRVKLSDFGFC-------------------------AQVSKE 300
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+P+ + VGT +MAPE++ + YG E D WSLG ++ EM+ G PP+
Sbjct: 301 VPRRK-------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
++ P + K++ + K+S + + LL + T EL +HP+
Sbjct: 348 FNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLKHPFL 404
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 146/329 (44%), Gaps = 55/329 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ L IGKG F +V+L R TG A+K + K++ L ++ + E ++ ++
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQ-LNPTSLQKLFREVRIMKILN 72
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYLIMEY GG++ L+ + E AR + V A+ HQ
Sbjct: 73 HPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ TV +
Sbjct: 133 KRIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTVGGKLDAF- 173
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
G Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 174 --------------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F + + +++ K + F +S + +L+ L + GT +E++ + W
Sbjct: 214 FDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKRFLVLNPIKRGT--LEQIMKDRW 267
Query: 404 FR-GIQWDKLYEMEAAYKPTVNGELDTQN 431
G + D+L KP V ELD +
Sbjct: 268 INAGHEEDEL-------KPFVEPELDISD 289
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 139/292 (47%), Gaps = 47/292 (16%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+G+ G V L R K +G A+K + ++ K+ + E + +E ++ + +V+++
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMM---DLRKQQRRELLFNEVVIMRDYQHFNVVEMYK 109
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL-AIHSIHQHNYVHRDI 232
S+ + L+++ME+L GG + ++ + + E +A + E+VL A+ +H +HRDI
Sbjct: 110 SYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT--VCEAVLQALAYLHAQGVIHRDI 167
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K D+++L +G +KLSDFG C + +PK +
Sbjct: 168 KSDSILLTLDGRVKLSDFGFCAQISKD-------------------------VPKRK--- 199
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRIT 352
VGT +MAPEV+ + Y E D WSLG ++ EM+ G PP+ SD P +
Sbjct: 200 ----------XLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP-VQ 248
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
K + K K+S RD + +L T +EL +HP+
Sbjct: 249 AMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERAT--AQELLDHPFL 298
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 48/300 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D+F + IG+G+ G V + +++G++ A+KK+ ++ K+ + E + +E ++ +
Sbjct: 76 LDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQ 129
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+++ S+ D L+++ME+L GG + ++ + E +A +A + A+ +H
Sbjct: 130 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHA 188
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRDIK D+++L +G +KLSDFG C A+
Sbjct: 189 QGVIHRDIKSDSILLTHDGRVKLSDFGFC-------------------------AQVSKE 223
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+P+ + VGT +MAPE++ + YG E D WSLG ++ EM+ G PP+
Sbjct: 224 VPRRK-------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
++ P + K++ + K+S + + LL + T EL +HP+
Sbjct: 271 FNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRAT--AAELLKHPFL 327
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 132/300 (44%), Gaps = 68/300 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR--C---- 167
+G+G+F R C K + + FA+K + K R E N E+ + C
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK------------RMEANTQKEITALKLCEGHP 66
Query: 168 -IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
IV+L F D +L+ME L GG++ + ++ SE A + + + V A+ +H
Sbjct: 67 NIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVG 126
Query: 227 YVHRDIKPDNLIL-DKNGHL--KLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
VHRD+KP+NL+ D+N +L K+ DFG +
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFAR----------------------------- 157
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPP 343
+ P + Q K + TL Y APE+L + GY CD WSLG I+Y ML G P
Sbjct: 158 LKPPDN-QPLK--------TPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVP 208
Query: 344 FCSDDPRITCRKIVNWKTCLK-----FPEEP--KISDEARDLICHLL-CDVETRLGTRGV 395
F S D +TC V +K F E +S EA+DLI LL D RL G+
Sbjct: 209 FQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGL 268
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 48/300 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D+F + IG+G+ G V + +++G++ A+KK+ ++ K+ + E + +E ++ +
Sbjct: 33 LDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQ 86
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+++ S+ D L+++ME+L GG + ++ + E +A +A + A+ +H
Sbjct: 87 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHA 145
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRDIK D+++L +G +KLSDFG C A+
Sbjct: 146 QGVIHRDIKSDSILLTHDGRVKLSDFGFC-------------------------AQVSKE 180
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+P+ + VGT +MAPE++ + YG E D WSLG ++ EM+ G PP+
Sbjct: 181 VPRRK-------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
++ P + K++ + K+S + + LL + T EL +HP+
Sbjct: 228 FNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA--ELLKHPFL 284
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 158/325 (48%), Gaps = 55/325 (16%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M + +R IG + +G+G+FG+V+L T + A+K + + ++LK+ + H+R
Sbjct: 1 MAISKRHIG--PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISR-QLLKKSDM-HMRV 56
Query: 156 ERNL--LAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 213
ER + L + I++L+ + +++EY GG++ ++ + ++ED R +
Sbjct: 57 EREISYLKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQ 115
Query: 214 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
+ + AI H+H VHRD+KP+NL+LD N ++K++DFGL + D
Sbjct: 116 QIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD--------------- 160
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGA 332
G ++ ++ G+ +Y APEV+ K Y G E D WS G
Sbjct: 161 -------GNFLK-----------------TSCGSPNYAAPEVINGKLYAGPEVDVWSCGI 196
Query: 333 IMYEMLIGYPPFCSDDPRI-TCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
++Y ML+G PF DD I K VN +C+ + +S A+ LI ++ V +
Sbjct: 197 VLYVMLVGRLPF--DDEFIPNLFKKVN--SCV-YVMPDFLSPGAQSLIRRMI--VADPMQ 249
Query: 392 TRGVEELKEHPWFRGIQWDKLYEME 416
++E++ PWF D L ME
Sbjct: 250 RITIQEIRRDPWFNVNLPDYLRPME 274
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 145/328 (44%), Gaps = 62/328 (18%)
Query: 105 IDDFEQLT--LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+D +LT L+G+GA+ +V+ + G+ +A+K ++K R +V R L
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRV--FREVETLYQC 67
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ I++L F+D YL+ E L GG I+ + ++ +E A + + A+ +
Sbjct: 68 QGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 223 HQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
H HRD+KP+N++ +K +K+ DF L ++ S + ++
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELT-------- 179
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL-----LKKGYGMECDWWSLGAIM 334
+ G+ +YMAPEV+ Y CD WSLG ++
Sbjct: 180 -----------------------TPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVL 216
Query: 335 YEMLIGYPPF-------CSDDPRITCRKIVN------WKTCLKFPEE--PKISDEARDLI 379
Y ML GYPPF C D CR N + +FP++ IS EA+DLI
Sbjct: 217 YIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLI 276
Query: 380 CHLLC-DVETRLGTRGVEELKEHPWFRG 406
LL D + RL ++ +HPW +G
Sbjct: 277 SKLLVRDAKQRLSA---AQVLQHPWVQG 301
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 142/293 (48%), Gaps = 47/293 (16%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+G+ G V + K TG+ A+KK+ ++ K+ + E + +E ++ + +V ++
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKM---DLRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL-AIHSIHQHNYVHRDI 232
S+ D L+++ME+L GG + ++ + E +A + SVL A+ +H +HRDI
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT--VCLSVLRALSYLHNQGVIHRDI 167
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
K D+++L +G +KLSDFG C + + +PK +
Sbjct: 168 KSDSILLTSDGRIKLSDFGFCAQVSKE-------------------------VPKRK--- 199
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRIT 352
VGT +MAPEV+ + YG E D WSLG ++ EM+ G PP+ ++ P
Sbjct: 200 ----------XLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQA 249
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFR 405
R+I + + + K+S R + +L ++ T +EL HP+ +
Sbjct: 250 MRRIRD-SLPPRVKDLHKVSSVLRGFLDLMLVREPSQRAT--AQELLGHPFLK 299
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 48/300 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D+F + IG+G+ G V + +++G++ A+KK+ ++ K+ + E + +E ++ +
Sbjct: 31 LDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQ 84
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+++ S+ D L+++ME+L GG + ++ + E +A +A + A+ +H
Sbjct: 85 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHA 143
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRDIK D+++L +G +KLSDFG C A+
Sbjct: 144 QGVIHRDIKSDSILLTHDGRVKLSDFGFC-------------------------AQVSKE 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+P+ + VGT +MAPE++ + YG E D WSLG ++ EM+ G PP+
Sbjct: 179 VPRRK-------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
++ P + K++ + K+S + + LL + T EL +HP+
Sbjct: 226 FNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA--ELLKHPFL 282
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 103 bits (256), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 131/300 (43%), Gaps = 49/300 (16%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F+ L +G+G++G V K TG+I A+K++ L + + E +++ + DS
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL-----QEIIKEISIMQQCDSPH 85
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIHQHN 226
+V+ + S+ + L+++MEY G + ++ +R L+ED + ++ + +H
Sbjct: 86 VVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMR 145
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
+HRDIK N++L+ GH KL+DFG+ L D +
Sbjct: 146 KIHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMA------------------------- 180
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
KRN +GT +MAPEV+ + GY D WSLG EM G PP+
Sbjct: 181 -------KRN------XVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYAD 227
Query: 347 DDP-RITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFR 405
P R N + PE SD D + L + T +L +HP+ R
Sbjct: 228 IHPMRAIFMIPTNPPPTFRKPE--LWSDNFTDFVKQCLVKSPEQRAT--ATQLLQHPFVR 283
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 48/300 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D+F + IG+G+ G V + +++G++ A+KK+ ++ K+ + E + +E ++ +
Sbjct: 22 LDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQ 75
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+++ S+ D L+++ME+L GG + ++ + E +A +A + A+ +H
Sbjct: 76 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHA 134
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRDIK D+++L +G +KLSDFG C A+
Sbjct: 135 QGVIHRDIKSDSILLTHDGRVKLSDFGFC-------------------------AQVSKE 169
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+P+ + VGT +MAPE++ + YG E D WSLG ++ EM+ G PP+
Sbjct: 170 VPRRK-------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
++ P + K++ + K+S + + LL + T EL +HP+
Sbjct: 217 FNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA--ELLKHPFL 273
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 146/300 (48%), Gaps = 48/300 (16%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+D+F + IG+G+ G V + +++G++ A+KK+ ++ K+ + E + +E ++ +
Sbjct: 26 LDNFIK---IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQ 79
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+V+++ S+ D L+++ME+L GG + ++ + E +A +A + A+ +H
Sbjct: 80 HENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA-VLQALSVLHA 138
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRDIK D+++L +G +KLSDFG C A+
Sbjct: 139 QGVIHRDIKSDSILLTHDGRVKLSDFGFC-------------------------AQVSKE 173
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
+P+ + VGT +MAPE++ + YG E D WSLG ++ EM+ G PP+
Sbjct: 174 VPRRK-------------XLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
++ P + K++ + K+S + + LL + T EL +HP+
Sbjct: 221 FNEPP-LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAA--ELLKHPFL 277
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 102 bits (253), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 146/324 (45%), Gaps = 47/324 (14%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FG+V++ + + TG A+K L + ++ V +R E L I++L+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
++++MEY+ GG++ + + L E +R + + + H+H VHRD+K
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLK 143
Query: 234 PDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQW 293
P+N++LD + + K++DFGL + D G+++
Sbjct: 144 PENVLLDAHMNAKIADFGLSNMMSD----------------------GEFLR-------- 173
Query: 294 KRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPPFCSDDPRIT 352
+ G+ +Y APEV+ + Y G E D WS G I+Y +L G PF D
Sbjct: 174 ---------XSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTL 224
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGIQWDKL 412
+KI + F ++ L+ H+L + T +++++EH WF+ L
Sbjct: 225 FKKICDG----IFYTPQYLNPSVISLLKHMLQVDPMKRAT--IKDIREHEWFKQDLPKYL 278
Query: 413 YEMEAAYKPT-VNGELDTQNFEKF 435
+ + +Y T ++ E + EKF
Sbjct: 279 FPEDPSYSSTMIDDEALKEVCEKF 302
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 47/300 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ L IGKG F +V+L R TG+ A+K + K++ L ++ + E ++ ++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLN 71
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYL+MEY GG++ L+ + E AR + V A+ HQ
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ T +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDTF- 172
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
G+ Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 173 --------------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F + + +++ K + F +S + +L+ L ++ GT +E++ + W
Sbjct: 213 FDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT--LEQIMKDRW 266
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 47/300 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ L IGKG F +V+L R TG+ A+K + K++ L ++ + E ++ ++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLN 71
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYL+MEY GG++ L+ + E AR + V A+ HQ
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ T +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDTF- 172
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
G+ Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 173 --------------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F + + +++ K + F +S + +L+ L ++ GT +E++ + W
Sbjct: 213 FDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT--LEQIMKDRW 266
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 102 bits (253), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 137/300 (45%), Gaps = 47/300 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ L IGKG F +V+L R TG+ A++ + K++ L ++ + E ++ ++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ-LNSSSLQKLFREVRIMKVLN 71
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYL+MEY GG++ L+ + E AR + V A+ HQ
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ T ++
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDEF- 172
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
G+ Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 173 --------------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F + + +++ K + F +S + +L+ L ++ GT +E++ + W
Sbjct: 213 FDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT--LEQIMKDRW 266
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 135/300 (45%), Gaps = 47/300 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ L IGKG F +V+L R TG+ A+K + K++ L ++ + E ++ ++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLN 71
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYL+MEY GG++ L+ + E AR + V A+ HQ
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ T +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDAF- 172
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
G Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 173 --------------------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F + + +++ K + F +S + +L+ L ++ GT +E++ + W
Sbjct: 213 FDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT--LEQIMKDRW 266
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 136/300 (45%), Gaps = 47/300 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ L IGKG F +V+L R TG+ A++ + K++ L ++ + E ++ ++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQ-LNSSSLQKLFREVRIMKVLN 71
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYL+MEY GG++ L+ + E AR + V A+ HQ
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 131
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ T +
Sbjct: 132 KFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDTF- 172
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
G+ Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 173 --------------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F + + +++ K + F +S + +L+ L ++ GT +E++ + W
Sbjct: 213 FDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT--LEQIMKDRW 266
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 136/300 (45%), Gaps = 47/300 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ L IGKG F +V+L R TG+ A+K + K++ L ++ + E ++ ++
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIMKVLN 64
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYL+MEY GG++ L+ + E AR + V A+ HQ
Sbjct: 65 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQ 124
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ T +
Sbjct: 125 KFIVHRDLKAENLLLDADMNIKIADFGFS------------------NEFTFGNKLDTF- 165
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
G+ Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 166 --------------------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 205
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F + + +++ K + F +S + +L+ L ++ GT +E++ + W
Sbjct: 206 FDGQNLKELRERVLRGKYRIPF----YMSTDCENLLKKFLILNPSKRGT--LEQIMKDRW 259
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 155/364 (42%), Gaps = 67/364 (18%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG--QVEHVRSERNLLAEV 163
D +E +IGKG F VR C + TG+ FA+K + ++ E ++ E ++ +
Sbjct: 26 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 85
Query: 164 DSRCIVQLFYSFQDSDFLYLIMEYLPGGDI-MTLLMRED---ILSEDVARFYIAESVLAI 219
IV+L ++ LY++ E++ G D+ ++ R D + SE VA Y+ + + A+
Sbjct: 86 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 145
Query: 220 HSIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
H +N +HRD+KP ++L + + +KL FG+ +I L + ++
Sbjct: 146 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV---------AIQLGESGLV----- 191
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
A VGT +MAPEV+ ++ YG D W G I++
Sbjct: 192 ------------------------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 227
Query: 337 MLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICH-LLCDVETRLGTRGV 395
+L G PF R+ I+ K + + IS+ A+DL+ L+ D R+ V
Sbjct: 228 LLSGCLPFYGTKERLF-EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI---TV 283
Query: 396 EELKEHPWFR-------------GIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPP 442
E HPW + ++ + + K V + + F F PP
Sbjct: 284 YEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSF--YGDPP 341
Query: 443 SEIP 446
E+P
Sbjct: 342 EELP 345
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/364 (24%), Positives = 155/364 (42%), Gaps = 67/364 (18%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG--QVEHVRSERNLLAEV 163
D +E +IGKG F VR C + TG+ FA+K + ++ E ++ E ++ +
Sbjct: 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHML 83
Query: 164 DSRCIVQLFYSFQDSDFLYLIMEYLPGGDI-MTLLMRED---ILSEDVARFYIAESVLAI 219
IV+L ++ LY++ E++ G D+ ++ R D + SE VA Y+ + + A+
Sbjct: 84 KHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEAL 143
Query: 220 HSIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
H +N +HRD+KP ++L + + +KL FG+ +I L + ++
Sbjct: 144 RYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV---------AIQLGESGLV----- 189
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
A VGT +MAPEV+ ++ YG D W G I++
Sbjct: 190 ------------------------AGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFI 225
Query: 337 MLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICH-LLCDVETRLGTRGV 395
+L G PF R+ I+ K + + IS+ A+DL+ L+ D R+ V
Sbjct: 226 LLSGCLPFYGTKERLF-EGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI---TV 281
Query: 396 EELKEHPWFR-------------GIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPP 442
E HPW + ++ + + K V + + F F PP
Sbjct: 282 YEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSF--YGDPP 339
Query: 443 SEIP 446
E+P
Sbjct: 340 EELP 343
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 99.4 bits (246), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 177
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 178 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 217 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 269
Query: 400 EHPWFR 405
+HPW +
Sbjct: 270 QHPWIK 275
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 41/241 (17%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ IGKG F +V+L R TG A+K + K++ L ++ + E ++ ++
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQ-LNPTSLQKLFREVRIMKILN 72
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYL+MEY GG++ L+ + E AR + V A+ HQ
Sbjct: 73 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ TV
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFS------------------NEFTVG------- 167
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
+L + G+ Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 168 ---NKLDTF-----------CGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
Query: 344 F 344
F
Sbjct: 214 F 214
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 99.0 bits (245), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 78 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 137
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 138 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 177
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 178 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 217 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 269
Query: 400 EHPWFR 405
+HPW +
Sbjct: 270 QHPWIK 275
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 142/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E + A
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINAM 61
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 158
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 159 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 206 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 262
Query: 402 PWF 404
W+
Sbjct: 263 RWY 265
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 145/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT ++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 146/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI+E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEIXINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEIXINKM 61
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 158
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 159 -------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 206 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 262
Query: 402 PWF 404
W+
Sbjct: 263 RWY 265
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEIXINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 61
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 158
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 159 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 206 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 262
Query: 402 PWF 404
W+
Sbjct: 263 RWY 265
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 61
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 158
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 159 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 206 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 262
Query: 402 PWF 404
W+
Sbjct: 263 RWY 265
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 61
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 158
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 159 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 206 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 262
Query: 402 PWF 404
W+
Sbjct: 263 RWY 265
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 61
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 158
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 159 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 206 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 262
Query: 402 PWF 404
W+
Sbjct: 263 RWY 265
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/306 (25%), Positives = 145/306 (47%), Gaps = 62/306 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG-QVEHVRSERNLLAEVDSRCIVQ 170
+G G F V+ CR K+TG +A K +KK ++ +RG E + E ++L E+ ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHR 230
L +++ + LI E + GG++ L ++ L+E+ A ++ + + ++ +H H
Sbjct: 79 LHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHF 138
Query: 231 DIKPDN-LILDKN---GHLKLSDFGLCKPLE--DKYSSILLEDEDIINQETVSEAEGQWM 284
D+KP+N ++LD+N +K+ DFGL ++ +++ +I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIF-------------------- 178
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT +++APE++ + G+E D WS+G I Y +L G PF
Sbjct: 179 ---------------------GTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
Query: 345 CSDDPRITCRKI--VNWKTCLKFPEE--PKISDEARDLICHLLC-DVETRLGTRGVEELK 399
D + T + VN+ +F +E S A+D I LL D + R+ +++
Sbjct: 218 LGDTKQETLANVSAVNY----EFEDEYFSNTSALAKDFIRRLLVKDPKKRM---TIQDSL 270
Query: 400 EHPWFR 405
+HPW +
Sbjct: 271 QHPWIK 276
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 59
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 119
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 120 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 156
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 157 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 204 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 260
Query: 402 PWF 404
W+
Sbjct: 261 RWY 263
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 151/350 (43%), Gaps = 87/350 (24%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM--LKRGQVEHVRSERNLLAEVDSRCIVQL 171
IG+G++G VR+ T I A+K + K+++ + VE +++E L+ ++ I +L
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 172 FYSFQDSDFLYLIMEYLPGGDIMTLL-------------------------MREDILSED 206
+ ++D ++ L+ME GG ++ L E+ ++
Sbjct: 94 YEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGS 153
Query: 207 VARF-----YIAESVL----------AIHSIHQHNYVHRDIKPDNLIL--DKNGHLKLSD 249
+ F ++ L A+H +H HRDIKP+N + +K+ +KL D
Sbjct: 154 IHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVD 213
Query: 250 FGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLD 309
FGL K ++ E M K GT
Sbjct: 214 FGLSKEFYK-----------------LNNGEYYGMTTK-----------------AGTPY 239
Query: 310 YMAPEVL--LKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPE 367
++APEVL + YG +CD WS G +++ +L+G PF + T +++N K C + P
Sbjct: 240 FVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPN 299
Query: 368 EPKISDEARDLICHLLC-DVETRL-GTRGVEELKEHPWFRGIQWDKLYEM 415
+S ARDL+ +LL +V+ R R + +HPW DK+Y+M
Sbjct: 300 YNVLSPLARDLLSNLLNRNVDERFDAMRAL----QHPWISQFS-DKIYKM 344
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 112/235 (47%), Gaps = 41/235 (17%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
++ + +L IG+G+FG+ L ++ G + +K++ S M + + E R E +LA +
Sbjct: 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSK-EREESRREVAVLANMK 81
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED--ILSEDVARFYIAESVLAIHSI 222
IVQ SF+++ LY++M+Y GGD+ + + + ED + + LA+ +
Sbjct: 82 HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHV 141
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H +HRDIK N+ L K+G ++L DFG+ + L TV
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS----------------TVE----- 180
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
LA + +GT Y++PE+ K Y + D W+LG ++YE+
Sbjct: 181 -----------------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 133/300 (44%), Gaps = 47/300 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
I ++ L IGKG F +V+L R TG+ A+K + K++ L ++ + E + ++
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQ-LNSSSLQKLFREVRIXKVLN 71
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV+LF + LYL+ EY GG++ L+ E AR + V A+ HQ
Sbjct: 72 HPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQ 131
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRD+K +NL+LD + ++K++DFG N+ T
Sbjct: 132 KFIVHRDLKAENLLLDADXNIKIADFGFS------------------NEFTFG------- 166
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPP 343
+L + G Y APE+ K Y G E D WSLG I+Y ++ G P
Sbjct: 167 ---NKLDAF-----------CGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 212
Query: 344 FCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPW 403
F + + +++ K + F S + +L+ L ++ GT +E++ + W
Sbjct: 213 FDGQNLKELRERVLRGKYRIPF----YXSTDCENLLKKFLILNPSKRGT--LEQIXKDRW 266
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 61
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 158
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 159 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 206 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 262
Query: 402 PWF 404
W+
Sbjct: 263 RWY 265
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 133/293 (45%), Gaps = 46/293 (15%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FG+V++ + TG A+K L + ++ V ++ E L I++L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
+++MEY+ GG++ + + + E AR + + A+ H+H VHRD+K
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 234 PDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQW 293
P+N++LD + + K++DFGL + D G+++
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSD----------------------GEFLR-------- 168
Query: 294 KRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPPFCSDDPRIT 352
++ G+ +Y APEV+ + Y G E D WS G I+Y +L G PF +
Sbjct: 169 ---------TSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 219
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFR 405
+KI PE ++ L+ H+L + T +++++EH WF+
Sbjct: 220 FKKIRG--GVFYIPE--YLNRSVATLLMHMLQVDPLKRAT--IKDIREHEWFK 266
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 141/317 (44%), Gaps = 60/317 (18%)
Query: 101 RKIGIDDFEQLT--LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
+K + D QL+ ++G G G+V C + TG+ A+K L S R +V+H
Sbjct: 3 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-ARQEVDHHWQASG 61
Query: 159 LLAEVDSRCIVQLFYSFQDSD-FLYLIMEYLPGGDIMTLLMR--EDILSEDVARFYIAES 215
V CI+ ++ + L +IME + GG++ + + + +E A + +
Sbjct: 62 GPHIV---CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 118
Query: 216 VLAIHSIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
AI +H HN HRD+KP+NL+ +K+ LKL+DFG K
Sbjct: 119 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK------------------ 160
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGA 332
ET A LQ + T Y+APEVL + Y CD WSLG
Sbjct: 161 -ETTQNA----------LQ-----------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 198
Query: 333 IMYEMLIGYPPFCSDDPRITC----RKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVE 387
IMY +L G+PPF S+ + R+I + PE ++S++A+ LI LL D
Sbjct: 199 IMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPT 258
Query: 388 TRLGTRGVEELKEHPWF 404
RL + + HPW
Sbjct: 259 ERL---TITQFMNHPWI 272
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/317 (29%), Positives = 141/317 (44%), Gaps = 60/317 (18%)
Query: 101 RKIGIDDFEQLT--LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
+K + D QL+ ++G G G+V C + TG+ A+K L S R +V+H
Sbjct: 22 KKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-ARQEVDHHWQASG 80
Query: 159 LLAEVDSRCIVQLFYSFQDSD-FLYLIMEYLPGGDIMTLLMR--EDILSEDVARFYIAES 215
V CI+ ++ + L +IME + GG++ + + + +E A + +
Sbjct: 81 GPHIV---CILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDI 137
Query: 216 VLAIHSIHQHNYVHRDIKPDNLIL---DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
AI +H HN HRD+KP+NL+ +K+ LKL+DFG K
Sbjct: 138 GTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK------------------ 179
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGA 332
ET A LQ + T Y+APEVL + Y CD WSLG
Sbjct: 180 -ETTQNA----------LQ-----------TPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 217
Query: 333 IMYEMLIGYPPFCSDDPRITC----RKIVNWKTCLKFPEEPKISDEARDLICHLL-CDVE 387
IMY +L G+PPF S+ + R+I + PE ++S++A+ LI LL D
Sbjct: 218 IMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPT 277
Query: 388 TRLGTRGVEELKEHPWF 404
RL + + HPW
Sbjct: 278 ERL---TITQFMNHPWI 291
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 61
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 122 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 158
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 159 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 206 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 262
Query: 402 PWF 404
W+
Sbjct: 263 RWY 265
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 141/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 132/293 (45%), Gaps = 46/293 (15%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FG+V++ + TG A+K L + ++ V ++ E L I++L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
+++MEY+ GG++ + + + E AR + + A+ H+H VHRD+K
Sbjct: 79 VISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLK 138
Query: 234 PDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQW 293
P+N++LD + + K++DFGL + D G+++
Sbjct: 139 PENVLLDAHMNAKIADFGLSNMMSD----------------------GEFLR-------- 168
Query: 294 KRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYPPFCSDDPRIT 352
+ G+ +Y APEV+ + Y G E D WS G I+Y +L G PF +
Sbjct: 169 ---------DSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTL 219
Query: 353 CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFR 405
+KI PE ++ L+ H+L + T +++++EH WF+
Sbjct: 220 FKKIRG--GVFYIPE--YLNRSVATLLMHMLQVDPLKRAT--IKDIREHEWFK 266
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 95.5 bits (236), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 136/306 (44%), Gaps = 66/306 (21%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EHVRSERNLLAEVDSRCIVQL 171
+G GAFG+V L +++G +K + K R QV E + +E +L +D I+++
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKD----RSQVPMEQIEAEIEVLKSLDHPNIIKI 85
Query: 172 FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAE----SVLAIHSIHQHNY 227
F F+D +Y++ME GG+++ ++ + ++ Y+AE + A+ H +
Sbjct: 86 FEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHV 145
Query: 228 VHRDIKPDNLIL-DKNGH--LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VH+D+KP+N++ D + H +K+ DFGL + + DE N
Sbjct: 146 VHKDLKPENILFQDTSPHSPIKIIDFGL--------AELFKSDEHSTN------------ 185
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT YMAPEV K+ +CD WS G +MY +L G PF
Sbjct: 186 -------------------AAGTALYMAPEV-FKRDVTFKCDIWSAGVVMYFLLTGCLPF 225
Query: 345 CSDDPRITCRKIVNWKTCLKFP----EEPKISDEARDLICHLLC-DVETRLGTRGVEELK 399
T + V K K P E ++ +A DL+ +L D E R ++
Sbjct: 226 TG-----TSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERR---PSAAQVL 277
Query: 400 EHPWFR 405
H WF+
Sbjct: 278 HHEWFK 283
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 109/236 (46%), Gaps = 41/236 (17%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F +L IGKG+FGEV T E+ A+K + E ++E ++ E +L++ DS
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 78
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
I + F S+ S L++IMEYL GG + LL + L E + E + + +H
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREILKGLDYLHSERK 137
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRDIK N++L + G +KL+DFG+ L D
Sbjct: 138 IHRDIKAANVLLSEQGDVKLADFGVAGQLTD----------------------------- 168
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPP 343
Q KRN VGT +MAPEV+ + Y + D WSLG E+ G PP
Sbjct: 169 ---TQIKRN------XFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 140/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P +C++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 141/310 (45%), Gaps = 64/310 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSE---RNLLAEVDSRC--I 168
+G+G F VR C +K+TG+ +A K LKK +RGQ R+E + E+ C +
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKR---RRGQ--DCRAEILHEIAVLELAKSCPRV 91
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRE--DILSE-DVARFYIAESVLAIHSIHQH 225
+ L ++++ + LI+EY GG+I +L + E +++SE DV R I + + ++ +HQ+
Sbjct: 92 INLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRL-IKQILEGVYYLHQN 150
Query: 226 NYVHRDIKPDNLILDKN---GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
N VH D+KP N++L G +K+ DFG+ + + G
Sbjct: 151 NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI------------------------GH 186
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
+E +GT +Y+APE+L D W++G I Y +L
Sbjct: 187 ACELRE---------------IMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTS 231
Query: 343 PFCSDDPRITCRKIVNWKTCLKFPEE--PKISDEARDLICHLLCDVETRLGTRGVEELKE 400
PF +D + T I + + + EE +S A D I LL + T E
Sbjct: 232 PFVGEDNQETYLNIS--QVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPT--AEICLS 287
Query: 401 HPWFRGIQWD 410
H W + QWD
Sbjct: 288 HSWLQ--QWD 295
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 126/278 (45%), Gaps = 56/278 (20%)
Query: 112 TLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQL 171
++GKG +G V R + A+K++ + + + Q H E L + + IVQ
Sbjct: 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLH--EEIALHKHLKHKNIVQY 84
Query: 172 FYSFQDSDFLYLIMEYLPGGDIMTLL------MREDILSEDVARFYIAESVLAIHSIHQH 225
SF ++ F+ + ME +PGG + LL ++++ E FY + + + +H +
Sbjct: 85 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN---EQTIGFYTKQILEGLKYLHDN 141
Query: 226 NYVHRDIKPDNLILDK-NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRDIK DN++++ +G LK+SDFG K L IN T
Sbjct: 142 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG------------INPCTE-------- 181
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK--KGYGMECDWWSLGAIMYEMLIGYP 342
+ GTL YMAPE++ K +GYG D WSLG + EM G P
Sbjct: 182 ------------------TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 223
Query: 343 PFCS-DDPRITCRKIVNWKTCLKFPEEPKISDEARDLI 379
PF +P+ K+ +K + PE +S EA+ I
Sbjct: 224 PFYELGEPQAAMFKVGMFKVHPEIPES--MSAEAKAFI 259
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 140/303 (46%), Gaps = 46/303 (15%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ--VEHVRSERNLLAE 162
++D++ + +G+GA+GEV+L + T E A+K + +KR E+++ E +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD----MKRAVDCPENIKKEICINKM 60
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
++ +V+ + ++ + YL +EY GG++ + + + E A+ + + + + +
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYL 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H HRDIKP+NL+LD+ +LK+SDFGL +Y+
Sbjct: 121 HGIGITHRDIKPENLLLDERDNLKISDFGLATVF--RYN--------------------- 157
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-CDWWSLGAIMYEMLIGY 341
NR L GTL Y+APE+L ++ + E D WS G ++ ML G
Sbjct: 158 -------------NRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 342 PPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEH 401
P+ D P + ++ +WK + K D A + H + VE + ++K+
Sbjct: 205 LPW--DQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKIL-VENPSARITIPDIKKD 261
Query: 402 PWF 404
W+
Sbjct: 262 RWY 264
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 92.4 bits (228), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 126/278 (45%), Gaps = 56/278 (20%)
Query: 112 TLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQL 171
++GKG +G V R + A+K++ + + + Q H E L + + IVQ
Sbjct: 14 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS-RYSQPLH--EEIALHKHLKHKNIVQY 70
Query: 172 FYSFQDSDFLYLIMEYLPGGDIMTLL------MREDILSEDVARFYIAESVLAIHSIHQH 225
SF ++ F+ + ME +PGG + LL ++++ E FY + + + +H +
Sbjct: 71 LGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDN---EQTIGFYTKQILEGLKYLHDN 127
Query: 226 NYVHRDIKPDNLILDK-NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
VHRDIK DN++++ +G LK+SDFG K L IN T
Sbjct: 128 QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAG------------INPCTE-------- 167
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK--KGYGMECDWWSLGAIMYEMLIGYP 342
+ GTL YMAPE++ K +GYG D WSLG + EM G P
Sbjct: 168 ------------------TFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKP 209
Query: 343 PFCS-DDPRITCRKIVNWKTCLKFPEEPKISDEARDLI 379
PF +P+ K+ +K + PE +S EA+ I
Sbjct: 210 PFYELGEPQAAMFKVGMFKVHPEIPES--MSAEAKAFI 245
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 118/250 (47%), Gaps = 38/250 (15%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
DF+ +L+G+GA+G V K TGEI A+KK++ + K E +L
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHE 69
Query: 167 CIVQLFY-----SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ +F SF++ + +Y+I E + + ++ +LS+D +++I +++ A+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H N +HRD+KP NL+++ N LK+ DFGL + +++ + N E + G
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD---------NSEPTGQQSG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG-YGMECDWWSLGAIMYEMLIG 340
M + +W Y APEV+L Y D WS G I+ E+ +
Sbjct: 179 ---MTEXVATRW----------------YRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
Query: 341 YPPFCSDDPR 350
P F D R
Sbjct: 220 RPIFPGRDYR 229
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 108/236 (45%), Gaps = 41/236 (17%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F +L IGKG+FGEV T ++ A+K + E ++E ++ E +L++ DS
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSSY 82
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+ + + S+ L++IMEYL GG + LL R E + E + + +H
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEILKGLDYLHSEKK 141
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRDIK N++L + G +KL+DFG+ L D
Sbjct: 142 IHRDIKAANVLLSEQGDVKLADFGVAGQLTD----------------------------- 172
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPP 343
Q KRN + VGT +MAPEV+ + Y + D WSLG E+ G PP
Sbjct: 173 ---TQIKRN------TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 116/250 (46%), Gaps = 38/250 (15%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
DF+ +L+G+GA+G V K TGEI A+KK++ + K E +L
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHE 69
Query: 167 CIVQLFY-----SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ +F SF++ + +Y+I E + + ++ +LS+D +++I +++ A+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H N +HRD+KP NL+++ N LK+ DFGL + +++ + N E + G
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD---------NSEPTGQQSG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG-YGMECDWWSLGAIMYEMLIG 340
V T Y APEV+L Y D WS G I+ E+ +
Sbjct: 179 M-------------------VEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
Query: 341 YPPFCSDDPR 350
P F D R
Sbjct: 220 RPIFPGRDYR 229
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 116/247 (46%), Gaps = 46/247 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSE---MLKRGQVEHVRSERNLLA 161
++ +E L L+G+G++G V CR K TG I A+KK +S+ M+K+ + ++ LL
Sbjct: 24 MEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK----LLK 79
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
++ +V L + YL+ E++ + L + + L V + Y+ + + I
Sbjct: 80 QLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGF 139
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
H HN +HRDIKP+N+++ ++G +KL DFG + L A G
Sbjct: 140 CHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTL---------------------AAPG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKK-GYGMECDWWSLGAIMYEMLIG 340
+ + E +W Y APE+L+ YG D W++G ++ EM +G
Sbjct: 179 E-VYDDEVATRW----------------YRAPELLVGDVKYGKAVDVWAIGCLVTEMFMG 221
Query: 341 YPPFCSD 347
P F D
Sbjct: 222 EPLFPGD 228
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 118/250 (47%), Gaps = 38/250 (15%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
DF+ +L+G+GA+G V K TGEI A+KK++ + K E +L
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFD--KPLFALRTLREIKILKHFKHE 69
Query: 167 CIVQLFY-----SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ +F SF++ + +Y+I E + + ++ +LS+D +++I +++ A+
Sbjct: 70 NIITIFNIQRPDSFENFNEVYIIQELMQTD--LHRVISTQMLSDDHIQYFIYQTLRAVKV 127
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H N +HRD+KP NL+++ N LK+ DFGL + +++ + N E + G
Sbjct: 128 LHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD---------NSEPTGQQSG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG-YGMECDWWSLGAIMYEMLIG 340
M + +W Y APEV+L Y D WS G I+ E+ +
Sbjct: 179 ---MTEYVATRW----------------YRAPEVMLTSAKYSRAMDVWSCGCILAELFLR 219
Query: 341 YPPFCSDDPR 350
P F D R
Sbjct: 220 RPIFPGRDYR 229
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 119
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 120 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 174
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 215
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 216 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 255
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 256 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 314
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 315 T--ITEFMNHPWI 325
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 66 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 125
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 126 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 180
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 181 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 221
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 222 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 261
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 262 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 320
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 321 T--ITEFMNHPWI 331
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 75
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 76 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 171
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 172 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 211
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 212 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 270
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 271 T--ITEFMNHPWI 281
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 20 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 79
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 80 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 134
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 135 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 175
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 176 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 215
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 216 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 274
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 275 T--ITEFMNHPWI 285
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 89
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 90 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 185
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 186 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 225
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 226 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 284
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 285 T--ITEFMNHPWI 295
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 21 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 80
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 81 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 135
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 136 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 176
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 177 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 216
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 217 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 275
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 276 T--ITEFMNHPWI 286
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 22 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 81
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 82 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 136
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 137 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 177
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 178 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 217
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 218 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 276
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 277 T--ITEFMNHPWI 287
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 75
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR--EDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 76 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 171
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 172 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 211
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 212 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 270
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 271 T--ITEFMNHPWI 281
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 41/242 (16%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F +L IGKG+FGEV T ++ A+K + E ++E ++ E +L++ DS
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 66
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+ + + S+ L++IMEYL GG + LL + +A + E + + +H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI-LREILKGLDYLHSEKK 125
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRDIK N++L ++G +KL+DFG+ L D
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----------------------------- 156
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSD 347
Q KRN + VGT +MAPEV+ + Y + D WSLG E+ G PP
Sbjct: 157 ---TQIKRN------TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
Query: 348 DP 349
P
Sbjct: 208 HP 209
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 132/293 (45%), Gaps = 44/293 (15%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKK---------SEMLKRGQVEHVRSER 157
DFE++ ++G+GAFG+V R +A+KK++ SE++ + H R
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
A ++ R V+ + + L++ MEY G + L+ E++ + + + +L
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 218 -AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
A+ IH +HRD+KP N+ +D++ ++K+ DFGL K + + L+ +++
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS-- 184
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG-YGMECDWWSLGAIMY 335
+ L S +GT Y+A EVL G Y + D +SLG I +
Sbjct: 185 -----------DNLT-----------SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDL---ICHLLCD 385
EM+ PF + R+ K + ++FP P D + I LL D
Sbjct: 223 EMIY---PFSTGMERVNILKKLR-SVSIEFP--PDFDDNKMKVEKKIIRLLID 269
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 73
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 74 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 169
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 170 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 209
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 210 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 268
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 269 T--ITEFMNHPWI 279
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 137/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 15 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 74
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 75 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 129
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 130 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 170
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG IMY
Sbjct: 171 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 210
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 211 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 269
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 270 T--ITEFMNHPWI 280
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 139/313 (44%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 14 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 73
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 74 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 128
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K + + ++
Sbjct: 129 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK--------------ETTSHNSL 174
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
+E T Y+APEVL + Y CD WSLG IMY
Sbjct: 175 TEP-------------------------CYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYI 209
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P + R I + PE ++S+E + LI +LL T+
Sbjct: 210 LLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 268
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 269 T--ITEFMNHPWI 279
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 41/242 (16%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F +L IGKG+FGEV T ++ A+K + E ++E ++ E +L++ DS
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 86
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+ + + S+ L++IMEYL GG + LL + +A + E + + +H
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI-LREILKGLDYLHSEKK 145
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRDIK N++L ++G +KL+DFG+ L D
Sbjct: 146 IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----------------------------- 176
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSD 347
Q KRN + VGT +MAPEV+ + Y + D WSLG E+ G PP
Sbjct: 177 ---TQIKRN------TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
Query: 348 DP 349
P
Sbjct: 228 HP 229
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 110/244 (45%), Gaps = 43/244 (17%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---KSEMLKRGQVEHVRSERNLLAEVD 164
+E+L +G+G F V R K T +I A+KK+K +SE K G E LL E+
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEA-KDGINRTALREIKLLQELS 70
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
I+ L +F + L+ +++ + + +L+ + Y+ ++ + +HQ
Sbjct: 71 HPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQ 130
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H +HRD+KP+NL+LD+NG LKL+DFGL K N+ + +W
Sbjct: 131 HWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP------------NRAYXHQVVTRW- 177
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIGYPP 343
Y APE+L + YG+ D W++G I+ E+L+ P
Sbjct: 178 -------------------------YRAPELLFGARMYGVGVDMWAVGCILAELLLRVPF 212
Query: 344 FCSD 347
D
Sbjct: 213 LPGD 216
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 110/242 (45%), Gaps = 41/242 (16%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F +L IGKG+FGEV T ++ A+K + E ++E ++ E +L++ DS
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 81
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+ + + S+ L++IMEYL GG + LL + +A + E + + +H
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI-LREILKGLDYLHSEKK 140
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRDIK N++L ++G +KL+DFG+ L D
Sbjct: 141 IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----------------------------- 171
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSD 347
Q KRN VGT +MAPEV+ + Y + D WSLG E+ G PP
Sbjct: 172 ---TQIKRN------XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
Query: 348 DP 349
P
Sbjct: 223 HP 224
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 110/242 (45%), Gaps = 41/242 (16%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F +L IGKG+FGEV T ++ A+K + E ++E ++ E +L++ DS
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAED--EIEDIQQEITVLSQCDSPY 66
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+ + + S+ L++IMEYL GG + LL + +A + E + + +H
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI-LREILKGLDYLHSEKK 125
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRDIK N++L ++G +KL+DFG+ L D
Sbjct: 126 IHRDIKAANVLLSEHGEVKLADFGVAGQLTD----------------------------- 156
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSD 347
Q KRN VGT +MAPEV+ + Y + D WSLG E+ G PP
Sbjct: 157 ---TQIKRN------XFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
Query: 348 DP 349
P
Sbjct: 208 HP 209
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 46/266 (17%)
Query: 89 ERRETEYMRLQRRKIG---IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEML 145
+R+ E Q++K+G DDFE+++ +G G G V K +G + A +KL E +
Sbjct: 48 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-I 105
Query: 146 KRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE 205
K + E +L E +S IV + +F + + ME++ GG + +L + + E
Sbjct: 106 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 165
Query: 206 DV-ARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSIL 264
+ + IA + +H +HRD+KP N++++ G +KL DFG+ L D
Sbjct: 166 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID------ 219
Query: 265 LEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME 324
++A S VGT YM+PE L Y ++
Sbjct: 220 ----------------------------------SMANSFVGTRSYMSPERLQGTHYSVQ 245
Query: 325 CDWWSLGAIMYEMLIGYPPFCSDDPR 350
D WS+G + EM +G P D +
Sbjct: 246 SDIWSMGLSLVEMAVGRYPIPPPDAK 271
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 130/319 (40%), Gaps = 74/319 (23%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS-R 166
FE + L+G G +G+V R TG++ A+K + + + E ++ E N+L + R
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMD----VTGDEEEEIKQEINMLKKYSHHR 81
Query: 167 CIVQLFYSFQDS------DFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESVLA 218
I + +F D L+L+ME+ G + L+ + + L E+ + E +
Sbjct: 82 NIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRG 141
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ +HQH +HRDIK N++L +N +KL DFG+ L+ TV
Sbjct: 142 LSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD----------------RTVG- 184
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-----KKGYGMECDWWSLGAI 333
+RN + +GT +MAPEV+ Y + D WSLG
Sbjct: 185 ---------------RRN------TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGIT 223
Query: 334 MYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEP-------KISDEARDLICHLLCDV 386
EM G PP C P + P P K S + + I C V
Sbjct: 224 AIEMAEGAPPLCDMHP---------MRALFLIPRNPAPRLKSKKWSKKFQSFIES--CLV 272
Query: 387 ETRLGTRGVEELKEHPWFR 405
+ E+L +HP+ R
Sbjct: 273 KNHSQRPATEQLMKHPFIR 291
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 142/326 (43%), Gaps = 70/326 (21%)
Query: 110 QLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC-- 167
Q ++G+GA V+ C T + +A+K ++K Q H+RS E+ +C
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEK-------QPGHIRSRVFREVEMLYQCQG 69
Query: 168 ---IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+++L F++ D YL+ E + GG I++ + + +E A + + A+ +H
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 225 HNYVHRDIKPDNLILDKNGH---LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
HRD+KP+N++ + +K+ DFGL ++ +N + +
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIK-------------LNGDCSPISTP 176
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG-----YGMECDWWSLGAIMYE 336
+ + P G+ +YMAPEV+ Y CD WSLG I+Y
Sbjct: 177 ELLTP------------------CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI 218
Query: 337 MLIGYPPF-------CSDDPRITCRKIVNW------KTCLKFPEE--PKISDEARDLICH 381
+L GYPPF C D C N + +FP++ IS A+DLI
Sbjct: 219 LLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISK 278
Query: 382 LLC-DVETRLGTRGVEELKEHPWFRG 406
LL D + RL ++ +HPW +G
Sbjct: 279 LLVRDAKQRLSA---AQVLQHPWVQG 301
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 48/297 (16%)
Query: 89 ERRETEYMRLQRRKIG---IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEML 145
+R+ E Q++K+G DDFE+++ +G G G V K +G + A +KL E +
Sbjct: 5 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-I 62
Query: 146 KRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE 205
K + E +L E +S IV + +F + + ME++ GG + +L + + E
Sbjct: 63 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 122
Query: 206 DV-ARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSIL 264
+ + IA + +H +HRD+KP N++++ G +KL DFG+ L D
Sbjct: 123 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID------ 176
Query: 265 LEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME 324
++A S VGT YM+PE L Y ++
Sbjct: 177 ----------------------------------SMANSFVGTRSYMSPERLQGTHYSVQ 202
Query: 325 CDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPK--ISDEARDLI 379
D WS+G + EM +G P S + +++++ P+ P S E +D +
Sbjct: 203 SDIWSMGLSLVEMAVGRYPIGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFV 259
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 117/266 (43%), Gaps = 46/266 (17%)
Query: 89 ERRETEYMRLQRRKIG---IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEML 145
+R+ E Q++K+G DDFE+++ +G G G V K +G + A +KL E +
Sbjct: 13 QRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-I 70
Query: 146 KRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE 205
K + E +L E +S IV + +F + + ME++ GG + +L + + E
Sbjct: 71 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPE 130
Query: 206 DV-ARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSIL 264
+ + IA + +H +HRD+KP N++++ G +KL DFG+ L D
Sbjct: 131 QILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID------ 184
Query: 265 LEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME 324
++A S VGT YM+PE L Y ++
Sbjct: 185 ----------------------------------SMANSFVGTRSYMSPERLQGTHYSVQ 210
Query: 325 CDWWSLGAIMYEMLIGYPPFCSDDPR 350
D WS+G + EM +G P D +
Sbjct: 211 SDIWSMGLSLVEMAVGRYPIPPPDAK 236
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 136/313 (43%), Gaps = 60/313 (19%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVR 119
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESV-LAI 219
VD + + Y+ + L ++ E L GG++ + + R D + I +S+ AI
Sbjct: 120 IVD---VYENLYAGRKC--LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAI 174
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+H N HRD+KP+NL+ N LKL+DFG K ET
Sbjct: 175 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK-------------------ETT 215
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
S + T Y+APEVL + Y CD WSLG I Y
Sbjct: 216 SHNS--------------------LTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYI 255
Query: 337 MLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLG 391
+L GYPPF S+ P R I + PE ++S+E + LI +LL T+
Sbjct: 256 LLCGYPPFYSNHGLAISPGXKTR-IRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRX 314
Query: 392 TRGVEELKEHPWF 404
T + E HPW
Sbjct: 315 T--ITEFXNHPWI 325
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 119/274 (43%), Gaps = 50/274 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+G F EV G A+KK++ +++ E +LL +++ +++ +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM----REDILSEDVARFYIAESVLAIHSIHQHNYVH 229
SF + + L +++E GD+ ++ ++ ++ E Y + A+ +H +H
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMH 159
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RDIKP N+ + G +KL D GL + K ++
Sbjct: 160 RDIKPANVFITATGVVKLGDLGLGRFFSSKTTA--------------------------- 192
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDP 349
A+S VGT YM+PE + + GY + D WSLG ++YEM PF D
Sbjct: 193 -----------AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM 241
Query: 350 RI--TCRKIVNWKTCLKFPEEPK--ISDEARDLI 379
+ C+KI + C +P P S+E R L+
Sbjct: 242 NLYSLCKKI---EQC-DYPPLPSDHYSEELRQLV 271
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 117/242 (48%), Gaps = 46/242 (19%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSE---MLKRGQVEHVRSERNLLA 161
++ +E++ IG+G++G V CR + TG+I A+KK +SE ++K+ + +R +L
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIR----MLK 57
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
++ +V L F+ L+L+ EY + L + + E + + +++ A++
Sbjct: 58 QLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNF 117
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
H+HN +HRD+KP+N+++ K+ +KL DFG ++ +L D + E +
Sbjct: 118 CHKHNCIHRDVKPENILITKHSVIKLCDFG--------FARLLTGPSDYYDDEVAT---- 165
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIG 340
+W Y +PE+L+ YG D W++G + E+L G
Sbjct: 166 RW--------------------------YRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
Query: 341 YP 342
P
Sbjct: 200 VP 201
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 131/303 (43%), Gaps = 58/303 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVE-----HVRSERNLLAE 162
+ ++ +G GAFG V K + +K +KK ++L+ +E V E +L+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 163 VDSRCIVQLFYSFQDSDFLYLIME-YLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
V+ I+++ F++ F L+ME + G D+ + R L E +A + + V A+
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGY 145
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ + +HRDIK +N+++ ++ +KL DFG LE
Sbjct: 146 LRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE------------------------ 181
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIG 340
R L Y+ GT++Y APEVL+ Y G E + WSLG +Y ++
Sbjct: 182 ---------------RGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE 226
Query: 341 YPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKE 400
PFC + + + + P +S E L+ LL V R T +E+L
Sbjct: 227 ENPFCELEETV--------EAAIHPPY--LVSKELMSLVSGLLQPVPERRTT--LEKLVT 274
Query: 401 HPW 403
PW
Sbjct: 275 DPW 277
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 131/293 (44%), Gaps = 44/293 (15%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKK---------SEMLKRGQVEHVRSER 157
DFE++ ++G+GAFG+V R +A+KK++ SE++ + H R
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
A ++ R V+ + + L++ MEY + L+ E++ + + + +L
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 218 -AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
A+ IH +HRD+KP N+ +D++ ++K+ DFGL K + + L+ +++
Sbjct: 127 EALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS-- 184
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG-YGMECDWWSLGAIMY 335
+ L S +GT Y+A EVL G Y + D +SLG I +
Sbjct: 185 -----------DNLT-----------SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222
Query: 336 EMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDL---ICHLLCD 385
EM+ PF + R+ K + ++FP P D + I LL D
Sbjct: 223 EMIY---PFSTGMERVNILKKLR-SVSIEFP--PDFDDNKMKVEKKIIRLLID 269
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 141/326 (43%), Gaps = 70/326 (21%)
Query: 110 QLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC-- 167
Q ++G+GA V+ C T + +A+K ++K Q H+RS E+ +C
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEK-------QPGHIRSRVFREVEMLYQCQG 69
Query: 168 ---IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+++L F++ D YL+ E + GG I++ + + +E A + + A+ +H
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 225 HNYVHRDIKPDNLILDKNGH---LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
HRD+KP+N++ + +K+ DF L ++ +N + +
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK-------------LNGDCSPISTP 176
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG-----YGMECDWWSLGAIMYE 336
+ + P G+ +YMAPEV+ Y CD WSLG I+Y
Sbjct: 177 ELLTP------------------CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYI 218
Query: 337 MLIGYPPF-------CSDDPRITCRKIVNW------KTCLKFPEE--PKISDEARDLICH 381
+L GYPPF C D C N + +FP++ IS A+DLI
Sbjct: 219 LLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISK 278
Query: 382 LLC-DVETRLGTRGVEELKEHPWFRG 406
LL D + RL ++ +HPW +G
Sbjct: 279 LLVRDAKQRLSA---AQVLQHPWVQG 301
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 108/238 (45%), Gaps = 43/238 (18%)
Query: 104 GIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV 163
G+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E+
Sbjct: 1 GMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 164 DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHS 221
+ IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE--------------- 163
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 -----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 63
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ T + + + + + Y+ + + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 166
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 167 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 114/261 (43%), Gaps = 46/261 (17%)
Query: 94 EYMRLQRRKIG---IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV 150
E Q+ K+G DDFE+++ +G G G V + + +G I A +KL E +K
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPSGLIMA-RKLIHLE-IKPAIR 58
Query: 151 EHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV-AR 209
+ E +L E +S IV + +F + + ME++ GG + +L + E++ +
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGK 118
Query: 210 FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDED 269
IA + +H +HRD+KP N++++ G +KL DFG+ L D
Sbjct: 119 VSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID----------- 167
Query: 270 IINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWS 329
++A S VGT YMAPE L Y ++ D WS
Sbjct: 168 -----------------------------SMANSFVGTRSYMAPERLQGTHYSVQSDIWS 198
Query: 330 LGAIMYEMLIGYPPFCSDDPR 350
+G + E+ +G P D +
Sbjct: 199 MGLSLVELAVGRYPIPPPDAK 219
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 55/259 (21%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL-LAEVDSRCIVQLF 172
+G+G+FGEV K TG A+KK++ +E R+E + A + S IV L+
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 151
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
+ ++ ++ + ME L GG + L+ + L ED A +Y+ +++ + +H +H D+
Sbjct: 152 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 211
Query: 233 KPDNLILDKNG-HLKLSDFGLCKPLE-DKYSSILLEDEDIINQETVSEAEGQWMMPKERL 290
K DN++L +G H L DFG L+ D LL + I ET
Sbjct: 212 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET--------------- 256
Query: 291 QQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPR 350
+MAPEV+L + + D WS +M ML G P+
Sbjct: 257 -------------------HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW------ 291
Query: 351 ITCRKIVNWKTCLKFPEEP 369
+ CLK EP
Sbjct: 292 ---TQFFRGPLCLKIASEP 307
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 63
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP+NL+++ G +KL+DFGL + + E
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 166
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 167 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E ++G G EV L R A+K L+ R E A ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 RCIVQLFYSFQD----SDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
IV ++ + + Y++MEY+ G + ++ E ++ A IA++ A++
Sbjct: 72 PAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
HQ+ +HRD+KP N+++ +K+ DFG+ + + D +S+ +T
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV---------TQTA----- 177
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+ +GT Y++PE D +SLG ++YE+L G
Sbjct: 178 ---------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 342 PPFCSDDP 349
PPF D P
Sbjct: 217 PPFTGDSP 224
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP+NL+++ G +KL+DFGL + + E
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 164
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 165 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 62
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP+NL+++ G +KL+DFGL + + E
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 165
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 166 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP+NL+++ G +KL+DFGL + + E
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 164
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 165 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 111/259 (42%), Gaps = 55/259 (21%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL-LAEVDSRCIVQLF 172
+G+G+FGEV K TG A+KK++ +E R+E + A + S IV L+
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVR---------LEVFRAEELMACAGLTSPRIVPLY 132
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
+ ++ ++ + ME L GG + L+ + L ED A +Y+ +++ + +H +H D+
Sbjct: 133 GAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDV 192
Query: 233 KPDNLILDKNG-HLKLSDFGLCKPLE-DKYSSILLEDEDIINQETVSEAEGQWMMPKERL 290
K DN++L +G H L DFG L+ D LL + I ET
Sbjct: 193 KADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET--------------- 237
Query: 291 QQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPR 350
+MAPEV+L + + D WS +M ML G P+
Sbjct: 238 -------------------HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW------ 272
Query: 351 ITCRKIVNWKTCLKFPEEP 369
+ CLK EP
Sbjct: 273 ---TQFFRGPLCLKIASEP 288
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 108/239 (45%), Gaps = 43/239 (17%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+ +++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E
Sbjct: 4 VDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKE 62
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIH 220
++ IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 63 LNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA 121
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 122 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE-------------- 167
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 168 ------------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E++ D+ T + + + + + Y+ + + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 162
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 163 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E ++G G EV L R A+K L+ R E A ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 RCIVQLFYSFQD----SDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
IV ++ + + Y++MEY+ G + ++ E ++ A IA++ A++
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
HQ+ +HRD+KP N+++ +K+ DFG+ + + D +S+ +T
Sbjct: 132 SHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSV---------XQTA----- 177
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+ +GT Y++PE D +SLG ++YE+L G
Sbjct: 178 ---------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 342 PPFCSDDP 349
PPF D P
Sbjct: 217 PPFTGDSP 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E ++G G EV L R A+K L+ R E A ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 RCIVQLFYSFQD----SDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
IV ++ + + Y++MEY+ G + ++ E ++ A IA++ A++
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
HQ+ +HRD+KP N+++ +K+ DFG+ + + D +S+ +T
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV---------TQTA----- 177
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+ +GT Y++PE D +SLG ++YE+L G
Sbjct: 178 ---------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 342 PPFCSDDP 349
PPF D P
Sbjct: 217 PPFTGDSP 224
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E ++G G EV L R A+K L+ R E A ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 RCIVQLFYSFQD----SDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
IV ++ + + Y++MEY+ G + ++ E ++ A IA++ A++
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
HQ+ +HRD+KP N+++ +K+ DFG+ + + D +S+ +T
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV---------TQTA----- 177
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+ +GT Y++PE D +SLG ++YE+L G
Sbjct: 178 ---------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 342 PPFCSDDP 349
PPF D P
Sbjct: 217 PPFTGDSP 224
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 67
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 170
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 171 ----------------------VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 205
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 ----------------------VVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMV 198
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 108/238 (45%), Gaps = 43/238 (18%)
Query: 104 GIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV 163
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKEL 59
Query: 164 DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHS 221
+ IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
H H +HRD+KP+NL+++ G +KL+DFGL + + E
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE--------------- 163
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 -----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E ++G G EV L R A+K L+ R E A ++
Sbjct: 12 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 71
Query: 166 RCIVQLFYSFQD----SDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
IV ++ + + Y++MEY+ G + ++ E ++ A IA++ A++
Sbjct: 72 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 131
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
HQ+ +HRD+KP N+++ +K+ DFG+ + + D +S+ +T
Sbjct: 132 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV---------TQTA----- 177
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+ +GT Y++PE D +SLG ++YE+L G
Sbjct: 178 ---------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 216
Query: 342 PPFCSDDP 349
PPF D P
Sbjct: 217 PPFTGDSP 224
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 43/246 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
DDFE+++ +G G G V K +G + A +KL E +K + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV-ARFYIAESVLAIHSIHQ 224
IV + +F + + ME++ GG + +L + + E + + IA + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H +HRD+KP N++++ G +KL DFG+ L D
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-------------------------- 157
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++A S VGT YM+PE L Y ++ D WS+G + EM +G P
Sbjct: 158 --------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 345 CSDDPR 350
D +
Sbjct: 204 PPPDAK 209
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 62
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 165
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 166 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 62
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 165
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 166 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 9 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 67
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 68 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 170
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 171 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 6 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 64
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 167
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 168 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 202
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 63
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 166
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 167 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 63
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 166
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 167 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 4 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 62
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 165
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 166 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 162
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 163 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 164
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 165 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 63
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 166
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 167 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 162
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 163 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 162
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 163 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 164
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 165 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 3 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 61
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 164
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 165 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 43/246 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
DDFE+++ +G G G V K +G + A +KL E +K + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV-ARFYIAESVLAIHSIHQ 224
IV + +F + + ME++ GG + +L + + E + + IA + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H +HRD+KP N++++ G +KL DFG+ L D
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-------------------------- 157
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++A S VGT YM+PE L Y ++ D WS+G + EM +G P
Sbjct: 158 --------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 345 CSDDPR 350
D +
Sbjct: 204 PPPDAK 209
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 43/246 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
DDFE+++ +G G G V K +G + A +KL E +K + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV-ARFYIAESVLAIHSIHQ 224
IV + +F + + ME++ GG + +L + + E + + IA + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H +HRD+KP N++++ G +KL DFG+ L D
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-------------------------- 157
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++A S VGT YM+PE L Y ++ D WS+G + EM +G P
Sbjct: 158 --------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 345 CSDDPR 350
D +
Sbjct: 204 PPPDAK 209
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 134/297 (45%), Gaps = 52/297 (17%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
DFE++ ++G+GAFG+V R +A+KK++ +E ++ + SE LLA ++ +
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTE----EKLSTILSEVXLLASLNHQ 62
Query: 167 CIVQLFYSF-------------QDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 213
+V+ + ++ + L++ EY + L+ E++ + + +
Sbjct: 63 YVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLF 122
Query: 214 ESVL-AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+L A+ IH +HR++KP N+ +D++ ++K+ DFGL K + + L+ +++
Sbjct: 123 RQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG-YGMECDWWSLG 331
+ L S +GT Y+A EVL G Y + D +SLG
Sbjct: 183 SS-------------DNLT-----------SAIGTAXYVATEVLDGTGHYNEKIDXYSLG 218
Query: 332 AIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDL---ICHLLCD 385
I +E + PF + R+ K + ++FP P D + I LL D
Sbjct: 219 IIFFEXIY---PFSTGXERVNILKKLR-SVSIEFP--PDFDDNKXKVEKKIIRLLID 269
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELNH 60
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSIH 223
IV+L + LYL+ E+L D+ + + + + + Y+ + + + H
Sbjct: 61 PNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE----------------- 162
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 163 ---------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 39/248 (15%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
D +E ++G G EV L R A+K L+ R E A ++
Sbjct: 29 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 88
Query: 166 RCIVQLFYSFQD----SDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
IV ++ + + Y++MEY+ G + ++ E ++ A IA++ A++
Sbjct: 89 PAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNF 148
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
HQ+ +HRD+KP N+++ +K+ DFG+ + + D +S+ +T
Sbjct: 149 SHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSV---------TQTA----- 194
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+ +GT Y++PE D +SLG ++YE+L G
Sbjct: 195 ---------------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGE 233
Query: 342 PPFCSDDP 349
PPF D P
Sbjct: 234 PPFTGDSP 241
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 43/246 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
DDFE+++ +G G G V K +G + A +KL E +K + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV-ARFYIAESVLAIHSIHQ 224
IV + +F + + ME++ GG + +L + + E + + IA + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H +HRD+KP N++++ G +KL DFG+ L D
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-------------------------- 157
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++A S VGT YM+PE L Y ++ D WS+G + EM +G P
Sbjct: 158 --------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 345 CSDDPR 350
D +
Sbjct: 204 PPPDAK 209
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 43/246 (17%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
DDFE+++ +G G G V K +G + A +KL E +K + E +L E +S
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 63
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV-ARFYIAESVLAIHSIHQ 224
IV + +F + + ME++ GG + +L + + E + + IA + +
Sbjct: 64 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H +HRD+KP N++++ G +KL DFG+ L D
Sbjct: 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLID-------------------------- 157
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
++A S VGT YM+PE L Y ++ D WS+G + EM +G P
Sbjct: 158 --------------SMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Query: 345 CSDDPR 350
D +
Sbjct: 204 PPPDAK 209
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 154/347 (44%), Gaps = 57/347 (16%)
Query: 90 RRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK-KSEMLKRG 148
R+ EY ++R + +E + +G GAFG+V + K TG + A K ++ KSE
Sbjct: 3 RKSREYEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE----E 58
Query: 149 QVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDV 207
++E E +LA D IV+L ++ L++++E+ PGG + +++ D L+E
Sbjct: 59 ELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQ 118
Query: 208 ARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
+ + + A++ +H +HRD+K N+++ G ++L+DFG+
Sbjct: 119 IQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAK------------ 166
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-----KKGYG 322
N +T+ KR+ S +GT +MAPEV++ Y
Sbjct: 167 ----NLKTLQ----------------KRD------SFIGTPYWMAPEVVMCETMKDTPYD 200
Query: 323 MECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLI-C 380
+ D WSLG + EM PP +P KI L P K S E RD +
Sbjct: 201 YKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPS--KWSVEFRDFLKI 258
Query: 381 HLLCDVETRLGTRGVEELKEHPWFRGIQWDK-LYEMEAAYKPTVNGE 426
L + ETR +L EHP+ I +K L E+ A K V E
Sbjct: 259 ALDKNPETR---PSAAQLLEHPFVSSITSNKALRELVAEAKAEVMEE 302
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 107/237 (45%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+KK++ + +R E +LL E++
Sbjct: 5 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIR-EISLLKELN 63
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E++ D+ + + + + + Y+ + + +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE---------------- 166
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 167 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 201
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 139/330 (42%), Gaps = 73/330 (22%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAK-TTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV 163
++ +++L +G+G +G V +AK + G I A+K+++ + G E +LL E+
Sbjct: 20 MEKYQKLEKVGEGTYGVVY--KAKDSQGRIVALKRIR-LDAEDEGIPSTAIREISLLKEL 76
Query: 164 DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIH 223
IV L L L+ E++ L + L + + Y+ + + + H
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
QH +HRD+KP NL+++ +G LKL+DFGL + S E
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE----------------- 179
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIGYP 342
V TL Y AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 180 ---------------------VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP 218
Query: 343 --PFCSDD---PRI-------------TCRKIVNWK--TCLKFPEEPKIS------DEAR 376
P +DD P+I +++ WK T F ++P S E
Sbjct: 219 LFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGI 278
Query: 377 DLICHLLC-DVETRLGTRGVEELKEHPWFR 405
DL+ ++LC D R+ R + HP+F+
Sbjct: 279 DLLSNMLCFDPNKRISAR---DAMNHPYFK 305
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 139/330 (42%), Gaps = 73/330 (22%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAK-TTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV 163
++ +++L +G+G +G V +AK + G I A+K+++ + G E +LL E+
Sbjct: 20 MEKYQKLEKVGEGTYGVVY--KAKDSQGRIVALKRIR-LDAEDEGIPSTAIREISLLKEL 76
Query: 164 DSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIH 223
IV L L L+ E++ L + L + + Y+ + + + H
Sbjct: 77 HHPNIVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH 136
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
QH +HRD+KP NL+++ +G LKL+DFGL + S E
Sbjct: 137 QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE----------------- 179
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIGYP 342
V TL Y AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 180 ---------------------VVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKP 218
Query: 343 --PFCSDD---PRI-------------TCRKIVNWK--TCLKFPEEPKIS------DEAR 376
P +DD P+I +++ WK T F ++P S E
Sbjct: 219 LFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGI 278
Query: 377 DLICHLLC-DVETRLGTRGVEELKEHPWFR 405
DL+ ++LC D R+ R + HP+F+
Sbjct: 279 DLLSNMLCFDPNKRISAR---DAMNHPYFK 305
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 115/262 (43%), Gaps = 56/262 (21%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
I DD+E +IG GA V+ E A+K++ L++ Q S LL E
Sbjct: 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRIN----LEKCQT----SMDELLKE 63
Query: 163 VD--SRC----IVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--------MREDILSEDVA 208
+ S+C IV + SF D L+L+M+ L GG ++ ++ + +L E
Sbjct: 64 IQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTI 123
Query: 209 RFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDE 268
+ E + + +H++ +HRD+K N++L ++G ++++DFG+ S+ L
Sbjct: 124 ATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV--------SAFLATGG 175
Query: 269 DIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDW 327
DI R + + VGT +MAPEV+ + +GY + D
Sbjct: 176 DI-------------------------TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADI 210
Query: 328 WSLGAIMYEMLIGYPPFCSDDP 349
WS G E+ G P+ P
Sbjct: 211 WSFGITAIELATGAAPYHKYPP 232
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+ K++ + +R E +LL E++
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN 60
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 163
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 164 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 198
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 106/237 (44%), Gaps = 43/237 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
+++F+++ IG+G +G V R K TGE+ A+ K++ + +R E +LL E++
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIR-EISLLKELN 59
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSI 222
IV+L + LYL+ E+L D+ + + + + + Y+ + + +
Sbjct: 60 HPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H H +HRD+KP NL+++ G +KL+DFGL + + E
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE---------------- 162
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
V TL Y APE+LL K Y D WSLG I EM+
Sbjct: 163 ----------------------VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMV 197
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 112/256 (43%), Gaps = 44/256 (17%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
I DD+E +IG GA V+ E A+K++ + + ++ + E +++
Sbjct: 7 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC--QTSMDELLKEIQAMSQ 64
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--------MREDILSEDVARFYIAE 214
IV + SF D L+L+M+ L GG ++ ++ + +L E + E
Sbjct: 65 CHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 124
Query: 215 SVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
+ + +H++ +HRD+K N++L ++G ++++DFG+ S+ L DI
Sbjct: 125 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGV--------SAFLATGGDI---- 172
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAI 333
R + + VGT +MAPEV+ + +GY + D WS G
Sbjct: 173 ---------------------TRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGIT 211
Query: 334 MYEMLIGYPPFCSDDP 349
E+ G P+ P
Sbjct: 212 AIELATGAAPYHKYPP 227
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 100/238 (42%), Gaps = 51/238 (21%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKL-----KKSEMLKRGQVEHVRSERNLLAEVDSRCI 168
+G G V L A+K + +K E LKR + E S +++ + I
Sbjct: 19 LGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS-----SQLSHQNI 73
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYV 228
V + ++ D YL+MEY+ G + + LS D A + + + I H V
Sbjct: 74 VSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIV 133
Query: 229 HRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKE 288
HRDIKP N+++D N LK+ DFG+ K L +
Sbjct: 134 HRDIKPQNILIDSNKTLKIFDFGIAKALSET----------------------------- 164
Query: 289 RLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGM-EC-DWWSLGAIMYEMLIGYPPF 344
L Q +GT+ Y +PE KG EC D +S+G ++YEML+G PPF
Sbjct: 165 SLTQTNH--------VLGTVQYFSPE--QAKGEATDECTDIYSIGIVLYEMLVGEPPF 212
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 105/239 (43%), Gaps = 44/239 (18%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
DDFE+++ +G G G V K +G + A +KL E +K + E +L E +S
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMA-RKLIHLE-IKPAIRNQIIRELQVLHECNS 66
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV-ARFYIAESVLAIHSIHQ 224
IV + +F + + ME++ GG + +L + + E + + IA + +
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 126
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
H +HRD+KP N++++ G +KL DFG+ L D+
Sbjct: 127 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDE------------------------- 161
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG-YP 342
+A VGT YM+PE L Y ++ D WS+G + EM +G YP
Sbjct: 162 ---------------MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 142/320 (44%), Gaps = 57/320 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLK-KSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+G GAFG+V + K TG + A K ++ KSE ++E E +LA D IV+L
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSE----EELEDYIVEIEILATCDHPYIVKLL 74
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSIHQHNYVHRD 231
++ L++++E+ PGG + +++ D L+E + + + A++ +H +HRD
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRD 134
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
+K N+++ G ++L+DFG+ N +T+
Sbjct: 135 LKAGNVLMTLEGDIRLADFGVSAK----------------NLKTLQ-------------- 164
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLL-----KKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
KR+ S +GT +MAPEV++ Y + D WSLG + EM PP
Sbjct: 165 --KRD------SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHE 216
Query: 347 DDPRITCRKIVNW-KTCLKFPEEPKISDEARDLI-CHLLCDVETRLGTRGVEELKEHPWF 404
+P KI L P K S E RD + L + ETR +L EHP+
Sbjct: 217 LNPMRVLLKIAKSDPPTLLTPS--KWSVEFRDFLKIALDKNPETR---PSAAQLLEHPFV 271
Query: 405 RGIQWDK-LYEMEAAYKPTV 423
I +K L E+ A K V
Sbjct: 272 SSITSNKALRELVAEAKAEV 291
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 121/265 (45%), Gaps = 50/265 (18%)
Query: 101 RKIGIDDF-EQLTLIGKGAFGEVRLCRAKTTGEIFAMKKL-KKSEMLKRGQVEHVRSERN 158
R + +DF E + +G GAFG+V + K T + A K + KSE ++E E +
Sbjct: 31 RDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEID 86
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSEDVARFYIAESVL 217
+LA D IV+L +F + L++++E+ GG + +++ E L+E + +++
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
A++ +H + +HRD+K N++ +G +KL+DFG+ N T+
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK----------------NTRTI- 189
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-----KKGYGMECDWWSLGA 332
RR S +GT +MAPEV++ + Y + D WSLG
Sbjct: 190 ------------------QRRD---SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 228
Query: 333 IMYEMLIGYPPFCSDDPRITCRKIV 357
+ EM PP +P KI
Sbjct: 229 TLIEMAEIEPPHHELNPMRVLLKIA 253
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 116/244 (47%), Gaps = 30/244 (12%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR- 166
+E + +GKGA+G V + TGE+ A+KK+ + + E +L E+
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDA-FQNSTDAQRTFREIMILTELSGHE 69
Query: 167 CIVQLFYSFQ-DSDF-LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV L + D+D +YL+ +Y+ + ++R +IL ++ + + + I +H
Sbjct: 70 NIVNLLNVLRADNDRDVYLVFDYMETD--LHAVIRANILEPVHKQYVVYQLIKVIKYLHS 127
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDI---INQETVSEAEG 281
+HRD+KP N++L+ H+K++DFGL + + +I +I IN+ T + +
Sbjct: 128 GGLLHRDMKPSNILLNAECHVKVADFGLSR----SFVNIRRVTNNIPLSINENTENFDDD 183
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIG 340
Q ++ +W Y APE+LL Y D WSLG I+ E+L G
Sbjct: 184 QPILTDYVATRW----------------YRAPEILLGSTKYTKGIDMWSLGCILGEILCG 227
Query: 341 YPPF 344
P F
Sbjct: 228 KPIF 231
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 44/247 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G+FGEV + K TG A+KK++ L+ +VE + + A + S IV L+
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVA----CAGLSSPRIVPLYG 117
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
+ ++ ++ + ME L GG + L+ + L ED A +Y+ +++ + +H +H D+K
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 177
Query: 234 PDNLILDKNG-HLKLSDFGLCKPLE-DKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
DN++L +G L DFG L+ D LL + I ET
Sbjct: 178 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET---------------- 221
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRI 351
+MAPEV++ K + D WS +M ML G P+
Sbjct: 222 ------------------HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 263
Query: 352 TCRKIVN 358
C KI +
Sbjct: 264 LCLKIAS 270
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 78.6 bits (192), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 120/267 (44%), Gaps = 54/267 (20%)
Query: 101 RKIGIDDF-EQLTLIGKGAFGEVRLCRAKTTGEIFAMKKL-KKSEMLKRGQVEHVRSERN 158
R + +DF E + +G GAFG+V + K T + A K + KSE ++E E +
Sbjct: 31 RDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEID 86
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSEDVARFYIAESVL 217
+LA D IV+L +F + L++++E+ GG + +++ E L+E + +++
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
A++ +H + +HRD+K N++ +G +KL+DFG+
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS------------------------ 182
Query: 278 EAEGQWMMPKERLQQWKRNRRALAY--STVGTLDYMAPEVLL-----KKGYGMECDWWSL 330
+N R + S +GT +MAPEV++ + Y + D WSL
Sbjct: 183 ----------------AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226
Query: 331 GAIMYEMLIGYPPFCSDDPRITCRKIV 357
G + EM PP +P KI
Sbjct: 227 GITLIEMAEIEPPHHELNPMRVLLKIA 253
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 44/247 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G+FGEV + K TG A+KK++ L+ +VE + + A + S IV L+
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVA----CAGLSSPRIVPLYG 133
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
+ ++ ++ + ME L GG + L+ + L ED A +Y+ +++ + +H +H D+K
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 193
Query: 234 PDNLILDKNG-HLKLSDFGLCKPLE-DKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
DN++L +G L DFG L+ D LL + I ET
Sbjct: 194 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET---------------- 237
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRI 351
+MAPEV++ K + D WS +M ML G P+
Sbjct: 238 ------------------HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 279
Query: 352 TCRKIVN 358
C KI +
Sbjct: 280 LCLKIAS 286
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 48/295 (16%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FG V C ++ + + K +K +K V+ E ++L R I+ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVK----VKGTDQVLVKKEISILNIARHRNILHLHE 68
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
SF+ + L +I E++ G DI + L+E Y+ + A+ +H HN H DI
Sbjct: 69 SFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDI 128
Query: 233 KPDNLILD--KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERL 290
+P+N+I ++ +K+ +FG + L+ + LL + P
Sbjct: 129 RPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLL-----------------FTAP---- 167
Query: 291 QQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPR 350
+Y APEV D WSLG ++Y +L G PF ++ +
Sbjct: 168 ------------------EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ 209
Query: 351 ITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFR 405
I+N + +IS EA D + LL V+ R E +HPW +
Sbjct: 210 QIIENIMNAEYTFDEEAFKEISIEAMDFVDRLL--VKERKSRMTASEALQHPWLK 262
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 110/247 (44%), Gaps = 44/247 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G+FGEV + K TG A+KK++ L+ +VE + + A + S IV L+
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVR----LEVFRVEELVA----CAGLSSPRIVPLYG 131
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIK 233
+ ++ ++ + ME L GG + L+ + L ED A +Y+ +++ + +H +H D+K
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVK 191
Query: 234 PDNLILDKNG-HLKLSDFGLCKPLE-DKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
DN++L +G L DFG L+ D LL + I ET
Sbjct: 192 ADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTET---------------- 235
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRI 351
+MAPEV++ K + D WS +M ML G P+
Sbjct: 236 ------------------HMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP 277
Query: 352 TCRKIVN 358
C KI +
Sbjct: 278 LCLKIAS 284
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 118/288 (40%), Gaps = 57/288 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F+QL +G G + V KTTG A+K++K + G E +L+ E+
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDS--EEGTPSTAIREISLMKELKHEN 64
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGG-----DIMTLLMREDILSEDVARFYIAESVLAIHSI 222
IV+L+ + L L+ E++ D T+ L ++ +++ + + +
Sbjct: 65 IVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFC 124
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H++ +HRD+KP NL+++K G LKL DFGL + I T S
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLARAFG-------------IPVNTFS----- 166
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIGY 341
S V TL Y AP+VL+ + Y D WS G I+ EM+ G
Sbjct: 167 --------------------SEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
Query: 342 PPFCSDDPRITCRKIVN---------WKTCLKFPE-EPKISDE-ARDL 378
P F + + I + W + K P+ P I RDL
Sbjct: 207 PLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDL 254
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 121/256 (47%), Gaps = 28/256 (10%)
Query: 91 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRG 148
RE Y + + D++ LIG+G++G V L K T + A+KK+ + +++
Sbjct: 11 RENLYFQGIKNVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLI--- 67
Query: 149 QVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFL-----YLIMEYLPGGDIMTLLMREDIL 203
+ + E +L + S I++L+ D L Y+++E + D+ L L
Sbjct: 68 DCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFL 126
Query: 204 SEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSI 263
+E+ + + +L + IH+ +HRD+KP N +L+++ +K+ DFGL + + +
Sbjct: 127 TEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSE---- 182
Query: 264 LLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYG 322
+D +I+N +E G +N + S V T Y APE +LL++ Y
Sbjct: 183 --KDTNIVNDLEENEEPG----------PHNKNLKKQLTSHVVTRWYRAPELILLQENYT 230
Query: 323 MECDWWSLGAIMYEML 338
D WS G I E+L
Sbjct: 231 KSIDIWSTGCIFAELL 246
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 49/243 (20%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKL---------KKSEMLKRGQVEHVRSE 156
D++E + IG GA+G V R + TG+ A+KK+ K + + ++H + +
Sbjct: 55 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 114
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++A D I++ + + +Y++++ + D+ ++ L+ + R+++ + +
Sbjct: 115 -NIIAIKD---ILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 169
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ +H +HRD+KP NL++++N LK+ DFG+ + L
Sbjct: 170 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL------------------CT 211
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMY 335
S AE Q+ M + +W Y APE++L Y D WS+G I
Sbjct: 212 SPAEHQYFMTEYVATRW----------------YRAPELMLSLHEYTQAIDLWSVGCIFG 255
Query: 336 EML 338
EML
Sbjct: 256 EML 258
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 120/271 (44%), Gaps = 56/271 (20%)
Query: 91 RETEYMRL--QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG 148
++T Y+ + QR + I+D E L +G G G+V R + TG + A+K++++S
Sbjct: 8 KQTGYLTIGGQRYQAEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSG----N 63
Query: 149 QVEHVRSERNL---LAEVDSRCIVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILS 204
+ E+ R +L L D IVQ F +F + +++ ME + + + M+ I
Sbjct: 64 KEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPE 123
Query: 205 EDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSIL 264
+ + +A + +H +HRD+KP N++LD+ G +KL DFG+ S L
Sbjct: 124 RILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI--------SGRL 175
Query: 265 LEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL-----LKK 319
++D+ K+R + G YMAPE + K
Sbjct: 176 VDDK-----------------AKDR--------------SAGCAAYMAPERIDPPDPTKP 204
Query: 320 GYGMECDWWSLGAIMYEMLIGYPPF--CSDD 348
Y + D WSLG + E+ G P+ C D
Sbjct: 205 DYDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 49/243 (20%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKL---------KKSEMLKRGQVEHVRSE 156
D++E + IG GA+G V R + TG+ A+KK+ K + + ++H + +
Sbjct: 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD 113
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++A D I++ + + +Y++++ + D+ ++ L+ + R+++ + +
Sbjct: 114 -NIIAIKD---ILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLL 168
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ +H +HRD+KP NL++++N LK+ DFG+ + L
Sbjct: 169 RGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGL------------------CT 210
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMY 335
S AE Q+ M + +W Y APE++L Y D WS+G I
Sbjct: 211 SPAEHQYFMTEYVATRW----------------YRAPELMLSLHEYTQAIDLWSVGCIFG 254
Query: 336 EML 338
EML
Sbjct: 255 EML 257
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 54/267 (20%)
Query: 101 RKIGIDDF-EQLTLIGKGAFGEVRLCRAKTTGEIFAMKKL-KKSEMLKRGQVEHVRSERN 158
R + +DF E + +G GAFG+V + K T + A K + KSE ++E E +
Sbjct: 31 RDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEID 86
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSEDVARFYIAESVL 217
+LA D IV+L +F + L++++E+ GG + +++ E L+E + +++
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 146
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
A++ +H + +HRD+K N++ +G +KL+DFG+
Sbjct: 147 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVS------------------------ 182
Query: 278 EAEGQWMMPKERLQQWKRNRRALAY--STVGTLDYMAPEVLL-----KKGYGMECDWWSL 330
+N R + +GT +MAPEV++ + Y + D WSL
Sbjct: 183 ----------------AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226
Query: 331 GAIMYEMLIGYPPFCSDDPRITCRKIV 357
G + EM PP +P KI
Sbjct: 227 GITLIEMAEIEPPHHELNPMRVLLKIA 253
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 131/326 (40%), Gaps = 72/326 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+E+L IG+G +G V + + T EI A+K+++ + G E LL E+ +
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKN 62
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
IV+L L L+ E+ L ++ + ++ + + + H N
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRD+KP NL++++NG LKL++FGL + + +P
Sbjct: 123 LHRDLKPQNLLINRNGELKLANFGLAR---------------------------AFGIPV 155
Query: 288 ERLQQWKRNRRALAYST-VGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEML-IGYPPF 344
YS V TL Y P+VL K Y D WS G I E+ G P F
Sbjct: 156 R------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203
Query: 345 CSDDPRITCRKIV---------NWKTCLKFPEE----------------PKISDEARDLI 379
+D ++I W + K P+ PK++ RDL+
Sbjct: 204 PGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLL 263
Query: 380 CHLL-CDVETRLGTRGVEELKEHPWF 404
+LL C+ R+ EE +HP+F
Sbjct: 264 QNLLKCNPVQRISA---EEALQHPYF 286
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 130/326 (39%), Gaps = 72/326 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+E+L IG+G +G V + + T EI A+K+++ + G E LL E+ +
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDD-DEGVPSSALREICLLKELKHKN 62
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
IV+L L L+ E+ L ++ + ++ + + + H N
Sbjct: 63 IVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNV 122
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRD+KP NL++++NG LKL+DFGL + + +P
Sbjct: 123 LHRDLKPQNLLINRNGELKLADFGLAR---------------------------AFGIPV 155
Query: 288 ERLQQWKRNRRALAYST-VGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEML-IGYPPF 344
YS V TL Y P+VL K Y D WS G I E+ P F
Sbjct: 156 R------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLF 203
Query: 345 CSDDPRITCRKIV---------NWKTCLKFPEE----------------PKISDEARDLI 379
+D ++I W + K P+ PK++ RDL+
Sbjct: 204 PGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLL 263
Query: 380 CHLL-CDVETRLGTRGVEELKEHPWF 404
+LL C+ R+ EE +HP+F
Sbjct: 264 QNLLKCNPVQRISA---EEALQHPYF 286
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKSQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGLC+ +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 49/241 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLK---RGQVE-HVRSERNLLAEVDSRCIV 169
+G G FG V + TGE A+K+ ++ K R +E + + N V +R +
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI---LSEDVARFYIAESVLAIHSIHQHN 226
+D L MEY GGD+ L + + L E R +++ A+ +H++
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 227 YVHRDIKPDNLILDKNGHL---KLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
+HRD+KP+N++L K+ D G K L+ +G+
Sbjct: 143 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD----------------------QGE- 179
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPP 343
L VGTL Y+APE+L +K Y + D+WS G + +E + G+ P
Sbjct: 180 ----------------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
Query: 344 F 344
F
Sbjct: 224 F 224
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 49/241 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLK---RGQVE-HVRSERNLLAEVDSRCIV 169
+G G FG V + TGE A+K+ ++ K R +E + + N V +R +
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI---LSEDVARFYIAESVLAIHSIHQHN 226
+D L MEY GGD+ L + + L E R +++ A+ +H++
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 227 YVHRDIKPDNLILDKNGHL---KLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
+HRD+KP+N++L K+ D G K L+ +G+
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD----------------------QGE- 178
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPP 343
L VGTL Y+APE+L +K Y + D+WS G + +E + G+ P
Sbjct: 179 ----------------LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
Query: 344 F 344
F
Sbjct: 223 F 223
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKK---SEML-KRGQVE-----HVRSERN 158
+ L +G GA+G V TG A+KKL + SE+ KR E H+R E N
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE-N 85
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D YL+M ++ G + LM+ + L ED +F + + +
Sbjct: 86 VIGLLDVFTPDETLDDFTD---FYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKG 140
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH +HRD+KP NL ++++ LK+ DFGL + + SE
Sbjct: 141 LRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR-------------------QADSE 181
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
G V T Y APEV+L Y D WS+G IM EM
Sbjct: 182 MXG----------------------XVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEM 219
Query: 338 LIGYPPFCSDD 348
+ G F D
Sbjct: 220 ITGKTLFKGSD 230
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 119/251 (47%), Gaps = 55/251 (21%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+D + L IG+GA+G V K +G+I A+K+++ S + ++ Q + + ++ D
Sbjct: 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIR-STVDEKEQKQLLMDLDVVMRSSDC 80
Query: 166 RCIVQLFYS-FQDSDFLYLIMEYLPGG------DIMTLLMREDILSEDVARFYIAESVLA 218
IVQ + + F++ D ++ ME + + ++L +D++ E++ +V A
Sbjct: 81 PYIVQFYGALFREGD-CWICMELMSTSFDKFYKYVYSVL--DDVIPEEILGKITLATVKA 137
Query: 219 IHSIHQH-NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
++ + ++ +HRDIKP N++LD++G++KL DFG+ L D +
Sbjct: 138 LNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA---------------- 181
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL----LKKGYGMECDWWSLGAI 333
+ R A G YMAPE + ++GY + D WSLG
Sbjct: 182 -----------------KTRDA------GCRPYMAPERIDPSASRQGYDVRSDVWSLGIT 218
Query: 334 MYEMLIGYPPF 344
+YE+ G P+
Sbjct: 219 LYELATGRFPY 229
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 125/281 (44%), Gaps = 63/281 (22%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
+R + +D F+ + G+G FG V+L + K+TG A+KK+ + + +++ ++
Sbjct: 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQD--- 72
Query: 159 LLAEVDSRCIVQL---FYSFQDSD----FLYLIMEYLPGGDIMTLLMREDILSEDVA--- 208
LA + IVQL FY+ + D +L ++MEY+P D + R + VA
Sbjct: 73 -LAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCR-NYYRRQVAPPP 128
Query: 209 ---RFYIAESVLAIHSIH--QHNYVHRDIKPDNLILDK-NGHLKLSDFGLCKPLEDKYSS 262
+ ++ + + +I +H N HRDIKP N+++++ +G LKL DFG K L +
Sbjct: 129 ILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPN 188
Query: 263 ILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGY 321
+ AY + + Y APE++ + Y
Sbjct: 189 V-------------------------------------AY--ICSRYYRAPELIFGNQHY 209
Query: 322 GMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTC 362
D WS+G I EM++G P F D+ +IV C
Sbjct: 210 TTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
++ + L IG+G +G V + GE FA+KK++ E G E ++L E+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIR-LEKEDEGIPSTTIREISILKELK 58
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIH 223
IV+L+ L L+ E+L D+ LL + E L A+ ++ + + I H
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
+HRD+KP NL++++ G LK++DFGL + +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR---------------------------AF 150
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIGYP 342
+P + V TL Y AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 151 GIPVRKYTH-----------EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAP 199
Query: 343 PF 344
F
Sbjct: 200 LF 201
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
++ + L IG+G +G V + GE FA+KK++ E G E ++L E+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIR-LEKEDEGIPSTTIREISILKELK 58
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIH 223
IV+L+ L L+ E+L D+ LL + E L A+ ++ + + I H
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
+HRD+KP NL++++ G LK++DFGL + +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR---------------------------AF 150
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIGYP 342
+P + V TL Y AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 151 GIPVRKYTH-----------EVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP 199
Query: 343 PF 344
F
Sbjct: 200 LF 201
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 121/264 (45%), Gaps = 51/264 (19%)
Query: 101 RKIGIDDFEQLTLIGK-GAFGEVRLCRAKTTGEIFAMKKL-KKSEMLKRGQVEHVRSERN 158
R + +DF ++ IG+ G FG+V + K T + A K + KSE ++E E +
Sbjct: 6 RDLNPEDFWEI--IGELGDFGKVYKAQNKETSVLAAAKVIDTKSE----EELEDYMVEID 59
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSEDVARFYIAESVL 217
+LA D IV+L +F + L++++E+ GG + +++ E L+E + +++
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD 119
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
A++ +H + +HRD+K N++ +G +KL+DFG+ K + ++ D
Sbjct: 120 ALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSA----KNTRTXIQRRD-------- 167
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-----KKGYGMECDWWSLGA 332
S +GT +MAPEV++ + Y + D WSLG
Sbjct: 168 -------------------------SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 202
Query: 333 IMYEMLIGYPPFCSDDPRITCRKI 356
+ EM PP +P KI
Sbjct: 203 TLIEMAEIEPPHHELNPMRVLLKI 226
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 106/242 (43%), Gaps = 43/242 (17%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
++ + L IG+G +G V + GE FA+KK++ E G E ++L E+
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQ-NNYGETFALKKIR-LEKEDEGIPSTTIREISILKELK 58
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIH 223
IV+L+ L L+ E+L D+ LL + E L A+ ++ + + I H
Sbjct: 59 HSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH 117
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
+HRD+KP NL++++ G LK++DFGL + +
Sbjct: 118 DRRVLHRDLKPQNLLINREGELKIADFGLAR---------------------------AF 150
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIGYP 342
+P + + TL Y AP+VL+ K Y D WS+G I EM+ G P
Sbjct: 151 GIPVRKYTH-----------EIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTP 199
Query: 343 PF 344
F
Sbjct: 200 LF 201
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 145/332 (43%), Gaps = 68/332 (20%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEV-RLCRAKTTGEIFAMKKLKKSEMLKRGQVE 151
TE + Q + + L IG G +V ++ K +I+A+K + L+ +
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQ 68
Query: 152 HVRSERNLLAEVD-----SRCIVQLFYSFQDSD-FLYLIMEYLPGGDIMTLLMREDILSE 205
+ S RN +A ++ S I++L Y ++ +D ++Y++ME D+ + L ++ +
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRL-YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP 126
Query: 206 DVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILL 265
+ Y + A+H+IHQH VH D+KP N ++ +G LKL DFG+ ++ +S++
Sbjct: 127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVK 185
Query: 266 EDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME- 324
+ S VGT++YM PE + E
Sbjct: 186 D------------------------------------SQVGTVNYMPPEAIKDMSSSREN 209
Query: 325 ----------CDWWSLGAIMYEMLIGYPPFCSDDPRIT-CRKIVNWKTCLKFPEEPKISD 373
D WSLG I+Y M G PF +I+ I++ ++FP+ P+ D
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KD 268
Query: 374 EARDLICHLLCDVETRLGTRGVEELKEHPWFR 405
L C L D + R+ + EL HP+ +
Sbjct: 269 LQDVLKCCLKRDPKQRI---SIPELLAHPYVQ 297
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 70/318 (22%)
Query: 108 FEQLTLIGKGAFGEV-RLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD-- 164
+ L IG G +V ++ K +I+A+K + L+ + + S RN +A ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 111
Query: 165 ---SRCIVQLFYSFQDSD-FLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
S I++L Y ++ +D ++Y++ME D+ + L ++ + + Y + A+H
Sbjct: 112 QQHSDKIIRL-YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 221 SIHQHNYVHRDIKPDN-LILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+IHQH VH D+KP N LI+D G LKL DFG+ ++ +S++ +
Sbjct: 170 TIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKD------------- 214
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-----------CDWW 328
S VGT++YM PE + E D W
Sbjct: 215 -----------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 329 SLGAIMYEMLIGYPPFCSDDPRIT-CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVE 387
SLG I+Y M G PF +I+ I++ ++FP+ P+ D L C L D +
Sbjct: 252 SLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPK 310
Query: 388 TRLGTRGVEELKEHPWFR 405
R+ + EL HP+ +
Sbjct: 311 QRI---SIPELLAHPYVQ 325
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 138/317 (43%), Gaps = 68/317 (21%)
Query: 108 FEQLTLIGKGAFGEV-RLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD-- 164
+ L IG G +V ++ K +I+A+K + L+ + + S RN +A ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 111
Query: 165 ---SRCIVQLF-YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
S I++L+ Y D ++Y++ME D+ + L ++ + + Y + A+H
Sbjct: 112 QQHSDKIIRLYDYEITDQ-YIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+IHQH VH D+KP N ++ +G LKL DFG+ ++ +S++ +
Sbjct: 170 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD-------------- 214
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-----------CDWWS 329
S VGT++YM PE + E D WS
Sbjct: 215 ----------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 252
Query: 330 LGAIMYEMLIGYPPFCSDDPRIT-CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET 388
LG I+Y M G PF +I+ I++ ++FP+ P+ D L C L D +
Sbjct: 253 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPKQ 311
Query: 389 RLGTRGVEELKEHPWFR 405
R+ + EL HP+ +
Sbjct: 312 RI---SIPELLAHPYVQ 325
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 113/265 (42%), Gaps = 67/265 (25%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKR--------------GQV 150
I+D+ + + +G F ++ LC + +A+KK +KS + K+ +
Sbjct: 30 INDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKY 87
Query: 151 EHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF 210
+ ++E ++ ++ + + + D +Y+I EY+ I+ +L ++ F
Sbjct: 88 DDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF 147
Query: 211 Y-------IAESVLAIHS-IH-QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYS 261
I +SVL S IH + N HRD+KP N+++DKNG +KLSDFG
Sbjct: 148 IPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG---------- 197
Query: 262 SILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY 321
E ++M+ K + K +R GT ++M PE +
Sbjct: 198 ------------------ESEYMVDK----KIKGSR--------GTYEFMPPEFFSNESS 227
Query: 322 --GMECDWWSLGAIMYEMLIGYPPF 344
G + D WSLG +Y M PF
Sbjct: 228 YNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 136/339 (40%), Gaps = 71/339 (20%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 175
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 176 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 216 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPW- 262
Query: 405 RGIQWDKLYEMEAAYKPTVNGELDTQNFEKFPEVDGPPS 443
M+ P E+ + P GP S
Sbjct: 263 ----------MQDVLLPQETAEIHLHSLSPGPSKSGPSS 291
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 68
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 69 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEFFKVKEPGES 179
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 180 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 48/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV--DS 165
+E L +IGKG+FG+V + A+K ++ + R E +R +L + ++
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSIH 223
++ + +F + + + E L ++ L+ + S + R + + + ++H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 224 QHNYVHRDIKPDNLILDKNGH--LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
++ +H D+KP+N++L + G +K+ DFG S E + +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG----------SSCYEHQRV----------- 256
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
Y+ + + Y APEV+L YGM D WSLG I+ E+L GY
Sbjct: 257 --------------------YTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296
Query: 342 PPFCSDD 348
P +D
Sbjct: 297 PLLPGED 303
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/238 (27%), Positives = 98/238 (41%), Gaps = 54/238 (22%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
F++L+ +G G++GEV R+K G ++A+K+ S RG + R LAEV S
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKR---SMSPFRGPKDRARK----LAEVGSH 110
Query: 167 -------CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI 219
C V+L ++++ LYL E L E Y+ +++LA+
Sbjct: 111 EKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLAL 170
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+H VH D+KP N+ L G KL DFGL ++ T
Sbjct: 171 AHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL-----------------LVELGTAGAG 213
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
E Q P+ YMAPE LL+ YG D +SLG + E+
Sbjct: 214 EVQEGDPR----------------------YMAPE-LLQGSYGTAADVFSLGLTILEV 248
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 141/318 (44%), Gaps = 70/318 (22%)
Query: 108 FEQLTLIGKGAFGEV-RLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD-- 164
+ L IG G +V ++ K +I+A+K + L+ + + S RN +A ++
Sbjct: 11 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 64
Query: 165 ---SRCIVQLFYSFQDSD-FLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
S I++L Y ++ +D ++Y++ME D+ + L ++ + + Y + A+H
Sbjct: 65 QQHSDKIIRL-YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 122
Query: 221 SIHQHNYVHRDIKPDN-LILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+IHQH VH D+KP N LI+D G LKL DFG+ ++ +S++ +
Sbjct: 123 TIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKD------------- 167
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-----------CDWW 328
S VGT++YM PE + E D W
Sbjct: 168 -----------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 204
Query: 329 SLGAIMYEMLIGYPPFCSDDPRIT-CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVE 387
SLG I+Y M G PF +I+ I++ ++FP+ P+ D L C L D +
Sbjct: 205 SLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPK 263
Query: 388 TRLGTRGVEELKEHPWFR 405
R+ + EL HP+ +
Sbjct: 264 QRI---SIPELLAHPYVQ 278
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKXQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 129/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E + P D+ + L E++AR + + + A+ H
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 174
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 175 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 215 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 262
Query: 405 RGI 407
+ +
Sbjct: 263 QDV 265
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 140/317 (44%), Gaps = 68/317 (21%)
Query: 108 FEQLTLIGKGAFGEV-RLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD-- 164
+ L IG G +V ++ K +I+A+K + L+ + + S RN +A ++
Sbjct: 14 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 67
Query: 165 ---SRCIVQLFYSFQDSD-FLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
S I++L Y ++ +D ++Y++ME D+ + L ++ + + Y + A+H
Sbjct: 68 QQHSDKIIRL-YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 125
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+IHQH VH D+KP N ++ +G LKL DFG+ ++ +S++ +
Sbjct: 126 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD-------------- 170
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-----------CDWWS 329
S VGT++YM PE + E D WS
Sbjct: 171 ----------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 208
Query: 330 LGAIMYEMLIGYPPFCSDDPRIT-CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET 388
LG I+Y M G PF +I+ I++ ++FP+ P+ D L C L D +
Sbjct: 209 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPKQ 267
Query: 389 RLGTRGVEELKEHPWFR 405
R+ + EL HP+ +
Sbjct: 268 RI---SIPELLAHPYVQ 281
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 113
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 205
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 206 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 252
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 253 GQPIFPGD 260
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 107
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 108 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 165
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 166 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 199
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 200 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 246
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 247 GQPIFPGD 254
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 117
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 118 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 175
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 176 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 209
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 210 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 256
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 257 GQPIFPGD 264
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 115
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 116 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 173
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 174 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 207
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 208 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 254
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 255 GQPIFPGD 262
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 107/247 (43%), Gaps = 48/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV--DS 165
+E L +IGKG+FG+V + A+K ++ + R E +R +L + ++
Sbjct: 99 YEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSIH 223
++ + +F + + + E L ++ L+ + S + R + + + ++H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 224 QHNYVHRDIKPDNLILDKNGH--LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
++ +H D+KP+N++L + G +K+ DFG S E + +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG----------SSCYEHQRV----------- 256
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
Y+ + + Y APEV+L YGM D WSLG I+ E+L GY
Sbjct: 257 --------------------YTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296
Query: 342 PPFCSDD 348
P +D
Sbjct: 297 PLLPGED 303
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQ-----VEHVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR ++H++ E N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 78
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 79 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 133
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF--------------- 178
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 179 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 213 LTGRTLFPGTD 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 158
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 159 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 216
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 217 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 250
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 251 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 297
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 298 GQPIFPGDS 306
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKXQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 113
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 114 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 171
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 172 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 218
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 219 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 252
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 253 GQPIFPGD 260
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 101
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 102 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 156
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 201
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 202 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 236 LTGRTLFPGTD 246
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 84
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 85 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 139
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY--------------- 184
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 185 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 219 LTGRTLFPGTD 229
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 102
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 103 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 157
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 202
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 203 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 237 LTGRTLFPGTD 247
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR-------KLDHCNIVRLR 79
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 172 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 219 GQPIFPGDS 227
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL K KR E H++ E N
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHE-N 94
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 95 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 149
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 194
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 195 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 229 LTGRTLFPGTD 239
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 88
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 89 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 143
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 188
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 189 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 223 LTGRTLFPGTD 233
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/318 (25%), Positives = 140/318 (44%), Gaps = 70/318 (22%)
Query: 108 FEQLTLIGKGAFGEV-RLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD-- 164
+ L IG G +V ++ K +I+A+K + L+ + + S RN +A ++
Sbjct: 58 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 111
Query: 165 ---SRCIVQLFYSFQDSD-FLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
S I++L Y ++ +D ++Y++ME D+ + L ++ + + Y + A+H
Sbjct: 112 QQHSDKIIRL-YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 169
Query: 221 SIHQHNYVHRDIKPDN-LILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+IHQH VH D+KP N LI+D G LKL DFG+ ++ +S++ +
Sbjct: 170 TIHQHGIVHSDLKPANFLIVD--GMLKLIDFGIANQMQPDTTSVVKD------------- 214
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-----------CDWW 328
S VG ++YM PE + E D W
Sbjct: 215 -----------------------SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVW 251
Query: 329 SLGAIMYEMLIGYPPFCSDDPRIT-CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVE 387
SLG I+Y M G PF +I+ I++ ++FP+ P+ D L C L D +
Sbjct: 252 SLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPK 310
Query: 388 TRLGTRGVEELKEHPWFR 405
R+ + EL HP+ +
Sbjct: 311 QRI---SIPELLAHPYVQ 325
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ IG GA+G V TG A+KKL + KR E H++ E N
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 87
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 88 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 142
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY--------------- 187
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 188 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 222 LTGRTLFPGTD 232
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 78
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 79 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 133
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 178
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 179 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 213 LTGRTLFPGTD 223
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR-------KLDHCNIVRLR 79
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 172 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 219 GQPIFPGDS 227
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 88
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 89 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 143
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGY--------------- 188
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 189 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 223 LTGRTLFPGTD 233
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 140/317 (44%), Gaps = 68/317 (21%)
Query: 108 FEQLTLIGKGAFGEV-RLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD-- 164
+ L IG G +V ++ K +I+A+K + L+ + + S RN +A ++
Sbjct: 10 YSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQTLDSYRNEIAYLNKL 63
Query: 165 ---SRCIVQLFYSFQDSD-FLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIH 220
S I++L Y ++ +D ++Y++ME D+ + L ++ + + Y + A+H
Sbjct: 64 QQHSDKIIRL-YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVH 121
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+IHQH VH D+KP N ++ +G LKL DFG+ ++ +S++ +
Sbjct: 122 TIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD-------------- 166
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME-----------CDWWS 329
S VGT++YM PE + E D WS
Sbjct: 167 ----------------------SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWS 204
Query: 330 LGAIMYEMLIGYPPFCSDDPRIT-CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVET 388
LG I+Y M G PF +I+ I++ ++FP+ P+ D L C L D +
Sbjct: 205 LGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KDLQDVLKCCLKRDPKQ 263
Query: 389 RLGTRGVEELKEHPWFR 405
R+ + EL HP+ +
Sbjct: 264 RI---SIPELLAHPYVQ 277
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 71
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 72 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 182
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 183 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 84
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 85 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 142
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 143 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 176
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 177 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 223
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 224 GQPIFPGDS 232
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 19 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKSL 72
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 73 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 131
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 132 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 183
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 184 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 215
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 102
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 103 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 157
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D E
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---------------EMXGX 202
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
+W Y APE++L Y D WS+G IM E+
Sbjct: 203 VATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 237 LTGRTLFPGTD 247
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 46 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKSL 99
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 100 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 158
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 159 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 210
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 211 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 22 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 75
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 76 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 134
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 135 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 186
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 187 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 14 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 67
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 68 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 126
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 127 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 178
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 179 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 210
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 20 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 73
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 74 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 132
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 133 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 184
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 185 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 216
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 92
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 93 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 147
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 148 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 192
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 193 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 226
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 227 LTGRTLFPGTD 237
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 68
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 69 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 179
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 180 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 92
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 93 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 150
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 151 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 184
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 185 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 231
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 232 GQPIFPGD 239
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 13 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 66
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 67 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 125
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 126 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 177
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 178 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 209
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 87
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 88 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 145
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 146 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 192
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 193 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 226
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 227 GQPIFPGD 234
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 21 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 74
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 75 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 133
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 134 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 185
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 186 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 68
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 69 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 127
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 128 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 179
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 180 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 211
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 98
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 99 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 156
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 157 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 203
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 204 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 237
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 238 GQPIFPGD 245
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 143/332 (43%), Gaps = 68/332 (20%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEV-RLCRAKTTGEIFAMKKLKKSEMLKRGQVE 151
TE + Q + + L IG G +V ++ K +I+A+K + L+ +
Sbjct: 15 TENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKK--QIYAIKYVN----LEEADNQ 68
Query: 152 HVRSERNLLAEVD-----SRCIVQLFYSFQDSD-FLYLIMEYLPGGDIMTLLMREDILSE 205
+ S RN +A ++ S I++L Y ++ +D ++Y++ME D+ + L ++ +
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRL-YDYEITDQYIYMVME-CGNIDLNSWLKKKKSIDP 126
Query: 206 DVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILL 265
+ Y + A+H+IHQH VH D+KP N ++ +G LKL DFG+ ++ ++
Sbjct: 127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVK 185
Query: 266 EDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME- 324
+ S VGT++YM PE + E
Sbjct: 186 D------------------------------------SQVGTVNYMPPEAIKDMSSSREN 209
Query: 325 ----------CDWWSLGAIMYEMLIGYPPFCSDDPRIT-CRKIVNWKTCLKFPEEPKISD 373
D WSLG I+Y M G PF +I+ I++ ++FP+ P+ D
Sbjct: 210 GKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPE-KD 268
Query: 374 EARDLICHLLCDVETRLGTRGVEELKEHPWFR 405
L C L D + R+ + EL HP+ +
Sbjct: 269 LQDVLKCCLKRDPKQRI---SIPELLAHPYVQ 297
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 91
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 196
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 197 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 231 GQPIFPGD 238
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 103/248 (41%), Gaps = 51/248 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L+ +G GA+G V +G A+KKL + + E LL +
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRP-FQSIIHAKRTYRELRLLKHMKHEN 111
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
++ L F + L YL+ +L G D+ ++ + L++D +F I + + +
Sbjct: 112 VIGLLDVFTPATSLEEFNDVYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRGLKY 169
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 170 IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY------------------ 211
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIG 340
V T Y APE++L Y M D WS+G IM E+L G
Sbjct: 212 -----------------------VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTG 248
Query: 341 YPPFCSDD 348
F D
Sbjct: 249 RTLFPGTD 256
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 87
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 88 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 142
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY--------------- 187
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 188 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 222 LTGRTLFPGTD 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 107/248 (43%), Gaps = 61/248 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 91
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 92 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 149
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 150 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 196
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 197 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 230
Query: 340 GYPPFCSD 347
G P F D
Sbjct: 231 GQPIFPGD 238
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 79
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAK-------------------------- 171
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
Q R ++Y + + Y APE++ Y D WS G ++ E+L+
Sbjct: 172 -----------QLVRGEPNVSY--ICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 219 GQPIFPGDS 227
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMR-------KLDHCNIVRLR 79
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + R + L + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVPA--TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 184
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 185 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 219 GQPIFPGDS 227
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKSL 86
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 87 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 197
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 198 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKK-GYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 105/247 (42%), Gaps = 48/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV--DS 165
+E L +IGKG FG+V + A+K ++ + R E +R +L + ++
Sbjct: 99 YEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNT 158
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAESVLAIHSIH 223
++ + +F + + + E L ++ L+ + S + R + + + ++H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELL-SMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH 217
Query: 224 QHNYVHRDIKPDNLILDKNGH--LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
++ +H D+KP+N++L + G +K+ DFG S E + +
Sbjct: 218 KNRIIHCDLKPENILLKQQGRSGIKVIDFG----------SSCYEHQRV----------- 256
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
Y + + Y APEV+L YGM D WSLG I+ E+L GY
Sbjct: 257 --------------------YXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGY 296
Query: 342 PPFCSDD 348
P +D
Sbjct: 297 PLLPGED 303
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 93
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 94 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 148
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGY--------------- 193
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 194 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 228 LTGRTLFPGTD 238
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 33 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKSL 86
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 87 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 145
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 146 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 197
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 198 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 229
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 80
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 81 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 138
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 139 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 185
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 186 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 219
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 220 GQPIFPGDS 228
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 87
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 88 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 142
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 187
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 188 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 222 LTGRTLFPGTD 232
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 58/249 (23%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
++G+GA V R K TG++FA+K L+ V+ E +L +++ + IV+LF
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVKLF 73
Query: 173 YSFQDSDFLY--LIMEYLPGGDIMTLLMREDI---LSEDVARFYIAESVLAIHSIHQHNY 227
+++ + LIME+ P G + T+L L E + + V ++ + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 228 VHRDIKPDNL--ILDKNGH--LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
VHR+IKP N+ ++ ++G KL+DFG + LED DE +
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--------DEQFV------------ 173
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPE-----VLLK---KGYGMECDWWSLGAIMY 335
S GT +Y+ P+ VL K K YG D WS+G Y
Sbjct: 174 -------------------SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214
Query: 336 EMLIGYPPF 344
G PF
Sbjct: 215 HAATGSLPF 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 81
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 82 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 136
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 137 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 181
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 182 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 215
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 216 LTGRTLFPGTD 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 113/242 (46%), Gaps = 27/242 (11%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKK--SEMLKRGQVEHVRSERNLLAEV 163
D++E LIG+G++G V L K + A+KK+ + +++ + + E +L +
Sbjct: 28 DNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLI---DCKRILREITILNRL 84
Query: 164 DSRCIVQLFYSFQDSDFL-----YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
S I++L D L Y+++E + D+ L L+E + + +L
Sbjct: 85 KSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLG 143
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDI-INQETVS 277
IH+ +HRD+KP N +L+++ +K+ DFGL + + D+DI I +
Sbjct: 144 EKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTIN--------SDKDIHIVNDLEE 195
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYE 336
+ E + P +N + S V T Y APE +LL++ Y D WS G I E
Sbjct: 196 KEENEEPGPHN------KNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAE 249
Query: 337 ML 338
+L
Sbjct: 250 LL 251
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 79
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 184
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 185 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 219 GQPIFPGDS 227
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 46/249 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
ID + ++T +G+G +GEV T E A+K+++ E + G E +LL E+
Sbjct: 33 IDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRL-EHEEEGVPGTAIREVSLLKELQ 91
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
R I++L + L+LI EY D+ + + +S V + ++ + + ++ H
Sbjct: 92 HRNIIELKSVIHHNHRLHLIFEY-AENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHS 150
Query: 225 HNYVHRDIKPDNLIL-----DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+HRD+KP NL+L + LK+ DFGL +
Sbjct: 151 RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR------------------------- 185
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEML 338
+ +P + + TL Y PE+LL + Y D WS+ I EML
Sbjct: 186 --AFGIPIRQFTH-----------EIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
Query: 339 IGYPPFCSD 347
+ P F D
Sbjct: 233 MKTPLFPGD 241
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 79
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 80 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 184
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 185 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 219 GQPIFPGDS 227
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT----------------- 180
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 181 ------------------------GXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 84
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 85 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 139
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 184
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 185 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 219 LTGRTLFPGTD 229
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 112 TLIGKGAFGEVRLCRAKTTGEIFAMKKLKK---SEML-KRGQVE-----HVRSERNLLAE 162
T +G GA+G V K +GE A+KKL + SE+ KR E H++ E N++
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGL 106
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
+D +F D YL+M ++ D+ ++ E SE+ ++ + + + + I
Sbjct: 107 LDVFTPASSLRNFYD---FYLVMPFM-QTDLQKIMGME--FSEEKIQYLVYQMLKGLKYI 160
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H VHRD+KP NL ++++ LK+ DFGL
Sbjct: 161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLA----------------------------- 191
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGY 341
R+ A V T Y APEV+L Y D WS+G IM EML G
Sbjct: 192 ------------RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
Query: 342 PPFCSDD 348
F D
Sbjct: 240 TLFKGKD 246
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 84
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 85 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 139
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 184
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 185 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 219 LTGRTLFPGTD 229
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 94
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 95 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 149
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 194
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 195 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 229 LTGRTLFPGTD 239
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 94
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 95 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 149
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 150 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 194
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 195 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 228
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 229 LTGRTLFPGTD 239
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 83
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 84 YFFYSSGEKKDEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 141
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 142 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 188
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 189 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 222
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 223 GQPIFPGDS 231
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 84
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 85 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 139
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 140 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 184
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 185 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 218
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 219 LTGRTLFPGTD 229
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 93
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 94 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 148
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 149 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 193
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 194 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 227
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 228 LTGRTLFPGTD 238
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 89
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 90 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 144
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 189
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 190 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 224 LTGRTLFPGTD 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQ-----VEHVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR ++H++ E N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 78
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 79 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIV-KCAKLTDDHVQFLIYQILRG 133
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 178
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 179 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 213 LTGRTLFPGTD 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 102
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 103 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 157
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 158 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 202
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 203 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 236
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 237 LTGRTLFPGTD 247
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 107/249 (42%), Gaps = 61/249 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
+IG G+FG V + +GE+ A+KK+ + + K +++ +R ++D IV+L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMR-------KLDHCNIVRLR 79
Query: 173 YSF------QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAIHS 221
Y F +D +L L+++Y+P + + + R + L + Y+ + ++
Sbjct: 80 YFFYSSGEKKDVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAY 137
Query: 222 IHQHNYVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
IH HRDIKP NL+LD + LKL DFG K L + + VS
Sbjct: 138 IHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL-------------VRGEPNVSXIC 184
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLI 339
++ Y APE++ Y D WS G ++ E+L+
Sbjct: 185 SRY--------------------------YRAPELIFGATDYTSSIDVWSAGCVLAELLL 218
Query: 340 GYPPFCSDD 348
G P F D
Sbjct: 219 GQPIFPGDS 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 89
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 90 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 144
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + T E
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------------------HTADE 185
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
G V T Y APE++L Y D WS+G IM E+
Sbjct: 186 MTGY----------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 224 LTGRTLFPGTD 234
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 101
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 102 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 156
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 157 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 201
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 202 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 235
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 236 LTGRTLFPGTD 246
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 79
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 80 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 134
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 179
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 180 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 214 LTGRTLFPGTD 224
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 88
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 89 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 143
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 188
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 189 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 223 LTGRTLFPGTD 233
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 87
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 88 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 142
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 143 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 187
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 188 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 221
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 222 LTGRTLFPGTD 232
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 105
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 106 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 160
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 205
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 206 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 240 LTGRTLFPGTD 250
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 100/240 (41%), Gaps = 20/240 (8%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR-CIVQLF 172
IG+G F V L A+ ++ +K+ ++ + +E L + ++ +
Sbjct: 29 IGEGTFSSVYLATAQL--QVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVK 86
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
Y F+ +D + + M YL + +L + LS R Y+ A+ IHQ VHRD+
Sbjct: 87 YCFRKNDHVVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDV 143
Query: 233 KPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
KP N + ++ L DFGL + D +L + QE S+ + +
Sbjct: 144 KPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICL------ 197
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPPF--CSDD 348
+RR GT + APEVL K D WS G I +L G PF SDD
Sbjct: 198 ----SRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDD 253
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 89
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 90 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 144
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + T E
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------------------HTADE 185
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
G V T Y APE++L Y D WS+G IM E+
Sbjct: 186 MTGY----------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 224 LTGRTLFPGTD 234
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 175
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 176 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 216 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 263
Query: 405 RGI 407
+ +
Sbjct: 264 QDV 266
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 202
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 203 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 243 EHDE------EIIGGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 290
Query: 405 RGI 407
+ +
Sbjct: 291 QDV 293
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 74
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 174
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 175 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 214
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 215 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 262
Query: 405 RGI 407
+ +
Sbjct: 263 QDV 265
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 88
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 89 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 143
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 144 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 188
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 189 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 222
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 223 LTGRTLFPGTD 233
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 189
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 190 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 230 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 277
Query: 405 RGI 407
+ +
Sbjct: 278 QDV 280
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 89
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 90 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 144
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + T E
Sbjct: 145 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-------------------HTADE 185
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
G V T Y APE++L Y D WS+G IM E+
Sbjct: 186 MTGY----------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 223
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 224 LTGRTLFPGTD 234
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 203
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 204 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 244 EHDE------EIIGGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 291
Query: 405 RGI 407
+ +
Sbjct: 292 QDV 294
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 203
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 204 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 244 EHDE------EIIGGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 291
Query: 405 RGI 407
+ +
Sbjct: 292 QDV 294
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 79
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 80 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 134
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 135 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 179
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 180 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 213
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 214 LTGRTLFPGTD 224
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 190
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 191 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 231 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 278
Query: 405 RGI 407
+ +
Sbjct: 279 QDV 281
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 78
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 79 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 133
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 134 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 178
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 179 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 213 LTGRTLFPGTD 223
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 75
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 175
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 176 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 215
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 216 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 263
Query: 405 RGI 407
+ +
Sbjct: 264 QDV 266
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 108/251 (43%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQ-----VEHVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR ++H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 80
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 81 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 135
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D+ +
Sbjct: 136 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGY--------------- 180
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 181 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 214
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 215 LTGRTLFPGTD 225
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 202
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 203 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 243 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 290
Query: 405 RGI 407
+ +
Sbjct: 291 QDV 293
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 105/233 (45%), Gaps = 40/233 (17%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS-RC---- 167
++GKG FG+ + TGE+ MK+L + + ++R L EV RC
Sbjct: 17 VLGKGCFGQAIKVTHRETGEVMVMKELIRFDE---------ETQRTFLKEVKVMRCLEHP 67
Query: 168 -IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA-IHSIHQH 225
+++ L I EY+ GG + ++ D R A+ + + + +H
Sbjct: 68 NVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
N +HRD+ N ++ +N ++ ++DFGL + L+ DE ++ EG
Sbjct: 128 NIIHRDLNSHNCLVRENKNVVVADFGLAR---------LMVDEK-------TQPEG---- 167
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
L+ K+ R Y+ VG +MAPE++ + Y + D +S G ++ E++
Sbjct: 168 ----LRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 109
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 209
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 210 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 249
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 250 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 297
Query: 405 RGI 407
+ +
Sbjct: 298 QDV 300
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 123/315 (39%), Gaps = 84/315 (26%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 170
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 171 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Query: 345 CSDDPRIT------------CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT 392
D+ I C+ ++ W L+ + P
Sbjct: 211 EHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTF--------------------- 249
Query: 393 RGVEELKEHPWFRGI 407
EE++ HPW + +
Sbjct: 250 ---EEIQNHPWMQDV 261
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 217
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 218 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 258 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 305
Query: 405 RGI 407
+ +
Sbjct: 306 QDV 308
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 203
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 204 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 244 EHDE------EIIGGQVFFR----QRVSXECQHLIRWCLALRPSDRPT--FEEIQNHPWM 291
Query: 405 RGI 407
+ +
Sbjct: 292 QDV 294
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 89
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 189
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 190 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 229
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 230 EHDE------EIIRGQVFFR----QRVSXECQHLIRWCLALRPSDRPT--FEEIQNHPWM 277
Query: 405 RGI 407
+ +
Sbjct: 278 QDV 280
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 202
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 203 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 243 EHDE------EIIGGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 290
Query: 405 RGI 407
+ +
Sbjct: 291 QDV 293
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 105
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 106 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 160
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DFGL + +D E
Sbjct: 161 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---------------EMXGY 205
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
+W Y APE++L Y D WS+G IM E+
Sbjct: 206 VATRW--------------------------YRAPEIMLNWMHYNQTVDIWSVGCIMAEL 239
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 240 LTGRTLFPGTD 250
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 190
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 191 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 231 EHDE------EIIRGQVFFR----QRVSXECQHLIRWCLALRPSDRPT--FEEIQNHPWM 278
Query: 405 RGI 407
+ +
Sbjct: 279 QDV 281
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 16 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 69
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + + Y ++ +
Sbjct: 70 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGM 128
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HR++ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 129 EYLGTKRYIHRNLATRNILVENENRVKIGDFGLTK--------VLPQDKEYYKVKEPGES 180
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 181 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 212
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 123/315 (39%), Gaps = 84/315 (26%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 117
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 217
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 218 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 257
Query: 345 CSDDPRI------------TCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT 392
D+ I C+ ++ W L+ + P
Sbjct: 258 EHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTF--------------------- 296
Query: 393 RGVEELKEHPWFRGI 407
EE++ HPW + +
Sbjct: 297 ---EEIQNHPWMQDV 308
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 101/239 (42%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 18 LRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS------TEEHLRDFEREIEILKSL 71
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIME+LP G + L + + + Y ++ +
Sbjct: 72 QHDNIVKYKGVCYSAGRRN-LKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGM 130
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 182
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 183 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 102/250 (40%), Gaps = 64/250 (25%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
DF+++ LIG G FG+V + + G+ + +K++K + E E LA++D
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-------EKAEREVKALAKLDHV 64
Query: 167 CIVQLFYSFQDSDF----------------LYLIMEYLPGGDIMTLL--MREDILSEDVA 208
IV + D+ L++ ME+ G + + R + L + +A
Sbjct: 65 NIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA 124
Query: 209 RFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDE 268
+ + IH ++RD+KP N+ L +K+ DFGL L++
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKN---------- 174
Query: 269 DIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWW 328
KR R + GTL YM+PE + + YG E D +
Sbjct: 175 -----------------------DGKRXR------SKGTLRYMSPEQISSQDYGKEVDLY 205
Query: 329 SLGAIMYEML 338
+LG I+ E+L
Sbjct: 206 ALGLILAELL 215
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 95/247 (38%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++QL IG GA G V G A+KKL + + + E LL V+ +
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TACT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM E++ G
Sbjct: 179 NFMMT----------------PYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGC 222
Query: 342 PPFCSDD 348
F D
Sbjct: 223 VIFQGTD 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 100/239 (41%), Gaps = 53/239 (22%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEV 163
L +GKG FG V +CR TGE+ A+KKL+ S EH+R E +L +
Sbjct: 18 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTE------EHLRDFEREIEILKSL 71
Query: 164 DSRCIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVLAI 219
IV+ + YS + L LIMEYLP G + L + + Y ++ +
Sbjct: 72 QHDNIVKYKGVCYSAGRRN-LKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGM 130
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ Y+HRD+ N++++ +K+ DFGL K +L +D++ + E+
Sbjct: 131 EYLGTKRYIHRDLATRNILVENENRVKIGDFGLTK--------VLPQDKEXXKVKEPGES 182
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
W APE L + + + D WS G ++YE+
Sbjct: 183 PIFW---------------------------YAPESLTESKFSVASDVWSFGVVLYELF 214
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 123/315 (39%), Gaps = 84/315 (26%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 90
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 190
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 191 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 230
Query: 345 CSDDPRI------------TCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT 392
D+ I C+ ++ W L+ + P
Sbjct: 231 EHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPXDRPTF--------------------- 269
Query: 393 RGVEELKEHPWFRGI 407
EE++ HPW + +
Sbjct: 270 ---EEIQNHPWMQDV 281
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 123/315 (39%), Gaps = 84/315 (26%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 122
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 182
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 222
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 223 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 262
Query: 345 CSDDPRIT------------CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT 392
D+ I C+ ++ W L+ + P
Sbjct: 263 EHDEEIIRGQVFFRQRVSXECQHLIRWCLALRPSDRPTF--------------------- 301
Query: 393 RGVEELKEHPWFRGI 407
EE++ HPW + +
Sbjct: 302 ---EEIQNHPWMQDV 313
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 97/262 (37%), Gaps = 75/262 (28%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---KSEMLKRGQVEHVRSERNLLA--- 161
+E + IG GA+G V R +G A+K ++ E L V V R L A
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 162 -------------EVDSRCIVQLFYSFQDSDF-LYLIMEYLPGGDIMTL--LMREDILSE 205
D V L + D D YL PG T+ LMR+ +
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 206 DVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILL 265
D +H + VHRD+KP+N+++ G +KL+DFGL + YS +
Sbjct: 126 DF--------------LHANCIVHRDLKPENILVTSGGTVKLADFGLAR----IYSYQMA 167
Query: 266 EDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMEC 325
D ++ TL Y APEVLL+ Y
Sbjct: 168 LDPVVV-----------------------------------TLWYRAPEVLLQSTYATPV 192
Query: 326 DWWSLGAIMYEMLIGYPPFCSD 347
D WS+G I EM P FC +
Sbjct: 193 DMWSVGCIFAEMFRRKPLFCGN 214
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 123/315 (39%), Gaps = 84/315 (26%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 103
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 203
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 204 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 243
Query: 345 CSDDPRIT------------CRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGT 392
D+ I C+ ++ W L+ + P
Sbjct: 244 EHDEEIIGGQVFFRQRVSXECQHLIRWCLALRPSDRPTF--------------------- 282
Query: 393 RGVEELKEHPWFRGI 407
EE++ HPW + +
Sbjct: 283 ---EEIQNHPWMQDV 294
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 98/262 (37%), Gaps = 75/262 (28%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---KSEMLKRGQVEHVRSERNLLA--- 161
+E + IG GA+G V R +G A+K ++ E L V V R L A
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 162 -------------EVDSRCIVQLFYSFQDSDF-LYLIMEYLPGGDIMTL--LMREDILSE 205
D V L + D D YL PG T+ LMR+ +
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 206 DVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILL 265
D +H + VHRD+KP+N+++ G +KL+DFGL
Sbjct: 126 DF--------------LHANCIVHRDLKPENILVTSGGTVKLADFGLA------------ 159
Query: 266 EDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMEC 325
R+ ++ ALA V TL Y APEVLL+ Y
Sbjct: 160 -----------------------RIYSYQ---MALA-PVVVTLWYRAPEVLLQSTYATPV 192
Query: 326 DWWSLGAIMYEMLIGYPPFCSD 347
D WS+G I EM P FC +
Sbjct: 193 DMWSVGCIFAEMFRRKPLFCGN 214
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 102
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 202
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 203 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 242
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 243 EHDE------EIIGGQVFFR----QRVSXECQHLIRWCLALRPSDRPT--FEEIQNHPWM 290
Query: 405 RGI 407
+ +
Sbjct: 291 QDV 293
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 97
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 157
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 197
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 198 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 237
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 238 EHDE------EIIRGQVFFR----QRVSXECQHLIRWCLALRPSDRPT--FEEIQNHPWM 285
Query: 405 RGI 407
+ +
Sbjct: 286 QDV 288
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 112/267 (41%), Gaps = 62/267 (23%)
Query: 92 ETEYMRLQRRKIGIDDFEQLTLIGKGAFGEV----------RLCRAKTT---GEIFAMKK 138
E E ++ Q +G + QL IG+GA+G V R+ K + + + +
Sbjct: 30 EVEMVKGQPFDVG-PRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRT 88
Query: 139 LKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM 198
L++ ++L R + E+V R++L + + Y QD +ME D+ LL
Sbjct: 89 LREIQILLRFRHENVIGIRDILRASTLEAMRDV-YIVQD------LME----TDLYKLLK 137
Query: 199 REDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLED 258
+ LS D +++ + + + IH N +HRD+KP NL+++ LK+ DFGL
Sbjct: 138 SQQ-LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLA----- 191
Query: 259 KYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK 318
R+ + + V T Y APE++L
Sbjct: 192 ------------------------------RIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 319 -KGYGMECDWWSLGAIMYEMLIGYPPF 344
KGY D WS+G I+ EML P F
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 170
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 171 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 211 EHDE------EIIGGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 258
Query: 405 RGI 407
+ +
Sbjct: 259 QDV 261
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 70
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 170
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 171 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 210
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 211 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 258
Query: 405 RGI 407
+ +
Sbjct: 259 QDV 261
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F L IG G+FG V R E+ A+KK+ S + + + E L ++
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+Q + +L+MEY G L + + L E ++ + +H HN
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRD+K N++L + G +KL DFG +SI+
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFG--------SASIM----------------------- 204
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGMECDWWSLGAIMYEMLIGYPPF 344
A A VGT +MAPEV+L + Y + D WSLG E+ PP
Sbjct: 205 -----------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 128/303 (42%), Gaps = 60/303 (19%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RC 167
L+G G FG V + A+K ++K + G++ + V E LL +V S
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSG 73
Query: 168 IVQLFYSFQDSDFLYLIMEYL-PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHN 226
+++L F+ D LI+E P D+ + L E++AR + + + A+ H
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 227 YVHRDIKPDNLILDKN-GHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+HRDIK +N+++D N G LKL DFG S LL+D + +
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFG---------SGALLKDTVYTDFD----------- 173
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPF 344
GT Y PE + + +G WSLG ++Y+M+ G PF
Sbjct: 174 --------------------GTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF 213
Query: 345 CSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
D+ +I+ + + ++S E + LI L + T EE++ HPW
Sbjct: 214 EHDE------EIIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWM 261
Query: 405 RGI 407
+ +
Sbjct: 262 QDV 264
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 57/249 (22%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
I + E ++G+GAFG V C+AK + A+K+++ SE ++ + +R L+
Sbjct: 6 IDYKEIEVEEVVGRGAFGVV--CKAKWRAKDVAIKQIE-SESERKAFIVELRQ----LSR 58
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA------ESV 216
V+ IV+L+ + + + L+MEY GG + +L + L A ++ + V
Sbjct: 59 VNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 116
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGH-LKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+HS+ +HRD+KP NL+L G LK+ DFG DI T
Sbjct: 117 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC--------------DIQTHMT 162
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
++ W MAPEV Y +CD +S G I++
Sbjct: 163 NNKGSAAW---------------------------MAPEVFEGSNYSEKCDVFSWGIILW 195
Query: 336 EMLIGYPPF 344
E++ PF
Sbjct: 196 EVITRRKPF 204
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
F L IG G+FG V R E+ A+KK+ S + + + E L ++
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 168 IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+Q + +L+MEY G L + + L E ++ + +H HN
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRD+K N++L + G +KL DFG +SI+
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFG--------SASIM----------------------- 165
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGMECDWWSLGAIMYEMLIGYPPF 344
A A VGT +MAPEV+L + Y + D WSLG E+ PP
Sbjct: 166 -----------APANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 107/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ D+GL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 139/334 (41%), Gaps = 65/334 (19%)
Query: 86 RNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---KS 142
R+L+ + + Q ++ DD E + +G+GA+G V R +G+I A+K+++ S
Sbjct: 31 RDLDSKACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNS 90
Query: 143 EMLKRGQVEHVRSERNLLAEVDSRCIVQLFYS-FQDSDFLYLIMEYLPGG---DIMTLLM 198
+ KR ++ S R VD V + + F++ D +++ ME + ++
Sbjct: 91 QEQKRLLMDLDISMRT----VDCPFTVTFYGALFREGD-VWICMELMDTSLDKFYKQVID 145
Query: 199 REDILSEDVARFYIAESVLAIHSIHQH-NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLE 257
+ + ED+ V A+ +H + +HRD+KP N++++ G +K+ DFG+ L
Sbjct: 146 KGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205
Query: 258 DKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEV-- 315
D + + G YMAPE
Sbjct: 206 DSVAKTI---------------------------------------DAGCKPYMAPERIN 226
Query: 316 --LLKKGYGMECDWWSLGAIMYEMLIGYPPFCS-DDPRITCRKIVNWKTCLKFPEEP--K 370
L +KGY ++ D WSLG M E+ I P+ S P +++V + P+ P K
Sbjct: 227 PELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPS----PQLPADK 282
Query: 371 ISDEARDLICHLLCDVETRLGTRGVEELKEHPWF 404
S E D L T EL +HP+F
Sbjct: 283 FSAEFVDFTSQCLKKNSKERPT--YPELMQHPFF 314
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 95/247 (38%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++QL IG GA G V G A+KKL + + + E LL V+ +
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP-FQNQTHAKRAYRELVLLKCVNHKN 82
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 83 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHME---LDHERMSYLLYQMLCGIKH 139
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 140 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAST 176
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM E++ G
Sbjct: 177 NFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGS 220
Query: 342 PPFCSDD 348
F D
Sbjct: 221 VIFQGTD 227
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 107/249 (42%), Gaps = 57/249 (22%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
I + E ++G+GAFG V C+AK + A+K+++ SE ++ + +R L+
Sbjct: 5 IDYKEIEVEEVVGRGAFGVV--CKAKWRAKDVAIKQIE-SESERKAFIVELRQ----LSR 57
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA------ESV 216
V+ IV+L+ + + + L+MEY GG + +L + L A ++ + V
Sbjct: 58 VNHPNIVKLYGACLNP--VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGV 115
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGH-LKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+HS+ +HRD+KP NL+L G LK+ DFG DI T
Sbjct: 116 AYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTAC--------------DIQTHMT 161
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
++ W MAPEV Y +CD +S G I++
Sbjct: 162 NNKGSAAW---------------------------MAPEVFEGSNYSEKCDVFSWGIILW 194
Query: 336 EMLIGYPPF 344
E++ PF
Sbjct: 195 EVITRRKPF 203
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 96/262 (36%), Gaps = 75/262 (28%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---KSEMLKRGQVEHVRSERNLLA--- 161
+E + IG GA+G V R +G A+K ++ E L V V R L A
Sbjct: 6 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEH 65
Query: 162 -------------EVDSRCIVQLFYSFQDSDF-LYLIMEYLPGGDIMTL--LMREDILSE 205
D V L + D D YL PG T+ LMR+ +
Sbjct: 66 PNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGL 125
Query: 206 DVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILL 265
D +H + VHRD+KP+N+++ G +KL+DFGL
Sbjct: 126 DF--------------LHANCIVHRDLKPENILVTSGGTVKLADFGLA------------ 159
Query: 266 EDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMEC 325
R+ ++ + V TL Y APEVLL+ Y
Sbjct: 160 -----------------------RIYSYQMA----LFPVVVTLWYRAPEVLLQSTYATPV 192
Query: 326 DWWSLGAIMYEMLIGYPPFCSD 347
D WS+G I EM P FC +
Sbjct: 193 DMWSVGCIFAEMFRRKPLFCGN 214
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 113/254 (44%), Gaps = 52/254 (20%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVR--LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
L+R + I D E +G G FG VR + R + A+K LK+ ++ E +
Sbjct: 6 LKRDNLLIADIE----LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMR 59
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIA 213
E ++ ++D+ IV+L Q ++ L L+ME GG + L+ RE+I +VA +
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL-LH 117
Query: 214 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPL--EDKYSSILLEDEDII 271
+ + + + + N+VHRD+ N++L + K+SDFGL K L +D Y +
Sbjct: 118 QVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT--------- 168
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+ + G+W L + APE + + + D WS G
Sbjct: 169 -----ARSAGKW-----------------------PLKWYAPECINFRKFSSRSDVWSYG 200
Query: 332 AIMYEML-IGYPPF 344
M+E L G P+
Sbjct: 201 VTMWEALSYGQKPY 214
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 104/247 (42%), Gaps = 58/247 (23%)
Query: 112 TLIGKGAFGEVRLCRAKTTGEIFAMKKLKK---SEML-KRGQVE-----HVRSERNLLAE 162
T +G GA+G V K +GE A+KKL + SE+ KR E H++ E N++
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE-NVIGL 88
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
+D +F D YL+M ++ D+ ++ + SE+ ++ + + + + I
Sbjct: 89 LDVFTPASSLRNFYD---FYLVMPFM-QTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYI 142
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H VHRD+KP NL ++++ LK+ DFGL
Sbjct: 143 HSAGVVHRDLKPGNLAVNEDCELKILDFGLA----------------------------- 173
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGY 341
R+ A V T Y APEV+L Y D WS+G IM EML G
Sbjct: 174 ------------RHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Query: 342 PPFCSDD 348
F D
Sbjct: 222 TLFKGKD 228
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 105/253 (41%), Gaps = 38/253 (15%)
Query: 108 FEQLTLIGKGAFGEVRLC-RAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
+E ++ +G+G FG V C + G A+K +K E K E R E N+L +++ +
Sbjct: 35 YEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYK----EAARLEINVLEKINEK 90
Query: 167 ------CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV--ARFYIAESVLA 218
VQ+F F + + E L G L + L + R + A
Sbjct: 91 DPDNKNLCVQMFDWFDYHGHMCISFELL-GLSTFDFLKDNNYLPYPIHQVRHMAFQLCQA 149
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ +H + H D+KP+N++ SD+ L LE K DE + V
Sbjct: 150 VKFLHDNKLTHTDLKPENILFVN------SDYELTYNLEKK------RDERSVKSTAVRV 197
Query: 279 AE-GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
+ G E + V T Y APEV+L+ G+ CD WS+G I++E
Sbjct: 198 VDFGSATFDHEHHS-----------TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEY 246
Query: 338 LIGYPPFCSDDPR 350
+G+ F + D R
Sbjct: 247 YVGFTLFQTHDNR 259
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 107/249 (42%), Gaps = 58/249 (23%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLF 172
++G+GA V R K TG++FA+K L+ V+ E +L +++ + IV+LF
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ--MREFEVLKKLNHKNIVKLF 73
Query: 173 YSFQDSDFLY--LIMEYLPGGDIMTLLMREDI---LSEDVARFYIAESVLAIHSIHQHNY 227
+++ + LIME+ P G + T+L L E + + V ++ + ++
Sbjct: 74 AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGI 133
Query: 228 VHRDIKPDNL--ILDKNGH--LKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
VHR+IKP N+ ++ ++G KL+DFG + LED DE +
Sbjct: 134 VHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELED--------DEQFV------------ 173
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPE-----VLLK---KGYGMECDWWSLGAIMY 335
GT +Y+ P+ VL K K YG D WS+G Y
Sbjct: 174 -------------------XLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214
Query: 336 EMLIGYPPF 344
G PF
Sbjct: 215 HAATGSLPF 223
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 52/248 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCR-AKTTGEIFAMKKLK---KSEMLKRGQVEHVRSERNLLAEV 163
+E + IG+GA+G+V R K G A+K+++ E + + V R+L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL-ETF 71
Query: 164 DSRCIVQLF----YSFQDSDF-LYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESV 216
+ +V+LF S D + L L+ E++ D+ T L + E + + + + + +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ +H H VHRD+KP N+++ +G +KL+DFGL + YS
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR----IYSF-------------- 172
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
+ AL S V TL Y APEVLL+ Y D WS+G I E
Sbjct: 173 --------------------QMALT-SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 337 MLIGYPPF 344
M P F
Sbjct: 212 MFRRKPLF 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 104/263 (39%), Gaps = 77/263 (29%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
DF+++ LIG G FG+V + + G+ + ++++K + E E LA++D
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-------EKAEREVKALAKLDHV 65
Query: 167 CIVQLFY--------------SFQDSDF---------------LYLIMEYLPGGDIMTLL 197
IV S + SD+ L++ ME+ G + +
Sbjct: 66 NIVHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWI 125
Query: 198 --MREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKP 255
R + L + +A + + IH +HRD+KP N+ L +K+ DFGL
Sbjct: 126 EKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTS 185
Query: 256 LEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEV 315
L++ KR R + GTL YM+PE
Sbjct: 186 LKN---------------------------------DGKRTR------SKGTLRYMSPEQ 206
Query: 316 LLKKGYGMECDWWSLGAIMYEML 338
+ + YG E D ++LG I+ E+L
Sbjct: 207 ISSQDYGKEVDLYALGLILAELL 229
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 108/274 (39%), Gaps = 56/274 (20%)
Query: 107 DFEQLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ-VEHVRSERNLLAE 162
DF +LTL IG G FG+V RA G+ A+K + Q +E+VR E L A
Sbjct: 5 DFAELTLEEIIGIGGFGKVY--RAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIH 220
+ I+ L L L+ME+ GG + +L + I + + + IA + +H
Sbjct: 63 LKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLH 122
Query: 221 SIHQHNYVHRDIKPDN-LILDK-------NGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+HRD+K N LIL K N LK++DFGL +
Sbjct: 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------------------ 164
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGA 332
+W R + S G +MAPEV+ + D WS G
Sbjct: 165 -------------------EWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGV 202
Query: 333 IMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFP 366
+++E+L G PF D + K L P
Sbjct: 203 LLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIP 236
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 110/291 (37%), Gaps = 63/291 (21%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
++ +GKG FG V LCR TG + A+K+L+ S Q + E +L + S
Sbjct: 16 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSD 72
Query: 167 CIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSI 222
IV+ + Y L L+MEYLP G + L R L Y ++ + +
Sbjct: 73 FIVKYRGVSYG-PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 131
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCK--PLEDKYSSILLEDEDIINQETVSEAE 280
VHRD+ N++++ H+K++DFGL K PL+ Y V
Sbjct: 132 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY--------------YVVREP 177
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
GQ + + APE L + + D WS G ++YE+
Sbjct: 178 GQ-----------------------SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTY 214
Query: 341 YPPFCSD------------DPRITCRKIVNWKTCLKFPEEPKISDEARDLI 379
CS D CR + + + P P E +L+
Sbjct: 215 CDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELM 265
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ DF L + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 45/243 (18%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+ L+ IG+GA+G V A+KK+ E + + E +L
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE--HQTYCQRTLREIKILLRFRHEN 102
Query: 168 IVQL-----FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI 222
I+ + + + +YL+ +L G D+ LL + LS D +++ + + + I
Sbjct: 103 IIGINDIIRAPTIEQMKDVYLV-THLMGADLYKLLKTQH-LSNDHICYFLYQILRGLKYI 160
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKICDFGLAR----------VADPD------------- 197
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGY 341
+ V T Y APE++L KGY D WS+G I+ EML
Sbjct: 198 ------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
Query: 342 PPF 344
P F
Sbjct: 246 PIF 248
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 52/248 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCR-AKTTGEIFAMKKLK---KSEMLKRGQVEHVRSERNLLAEV 163
+E + IG+GA+G+V R K G A+K+++ E + + V R+L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL-ETF 71
Query: 164 DSRCIVQLF----YSFQDSDF-LYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESV 216
+ +V+LF S D + L L+ E++ D+ T L + E + + + + + +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ +H H VHRD+KP N+++ +G +KL+DFGL + YS
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR----IYSF-------------- 172
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
+ AL S V TL Y APEVLL+ Y D WS+G I E
Sbjct: 173 --------------------QMALT-SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 337 MLIGYPPF 344
M P F
Sbjct: 212 MFRRKPLF 219
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 112/289 (38%), Gaps = 59/289 (20%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
++ +GKG FG V LCR TG + A+K+L+ S Q + E +L + S
Sbjct: 12 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSD 68
Query: 167 CIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSI 222
IV+ + Y + L L+MEYLP G + L R L Y ++ + +
Sbjct: 69 FIVKYRGVSYGPGRPE-LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHRD+ N++++ H+K++DFGL K +L D+D V GQ
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAK--------LLPLDKD----XXVVREPGQ 175
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
+ + APE L + + D WS G ++YE+
Sbjct: 176 -----------------------SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCD 212
Query: 343 PFCSD------------DPRITCRKIVNWKTCLKFPEEPKISDEARDLI 379
CS D CR + + + P P E +L+
Sbjct: 213 KSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELM 261
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 102/241 (42%), Gaps = 41/241 (17%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVD 164
++ + +L +G+G + V ++K T + A+K+++ + G E +LL ++
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEH--EEGAPCTAIREVSLLKDLK 58
Query: 165 SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
IV L L L+ EYL L +I++ + ++ + + + H+
Sbjct: 59 HANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHR 118
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRD+KP NL++++ G LKL+DFGL + SI + D
Sbjct: 119 QKVLHRDLKPQNLLINERGELKLADFGLARA-----KSIPTKTYD--------------- 158
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEMLIGYPP 343
+ V TL Y P++LL Y + D W +G I YEM G P
Sbjct: 159 ------------------NEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPL 200
Query: 344 F 344
F
Sbjct: 201 F 201
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 52/248 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCR-AKTTGEIFAMKKLK---KSEMLKRGQVEHVRSERNLLAEV 163
+E + IG+GA+G+V R K G A+K+++ E + + V R+L
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHL-ETF 71
Query: 164 DSRCIVQLF----YSFQDSDF-LYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESV 216
+ +V+LF S D + L L+ E++ D+ T L + E + + + + + +
Sbjct: 72 EHPNVVRLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQLL 130
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ +H H VHRD+KP N+++ +G +KL+DFGL + YS
Sbjct: 131 RGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLAR----IYSF-------------- 172
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
+ AL S V TL Y APEVLL+ Y D WS+G I E
Sbjct: 173 --------------------QMALT-SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAE 211
Query: 337 MLIGYPPF 344
M P F
Sbjct: 212 MFRRKPLF 219
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 96/238 (40%), Gaps = 51/238 (21%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
++ +GKG FG V LCR TG + A+K+L+ S Q + E +L + S
Sbjct: 15 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSD 71
Query: 167 CIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSI 222
IV+ + Y L L+MEYLP G + L R L Y ++ + +
Sbjct: 72 FIVKYRGVSYG-PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCK--PLEDKYSSILLEDEDIINQETVSEAE 280
VHRD+ N++++ H+K++DFGL K PL+ Y V
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY--------------YVVREP 176
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
GQ + + APE L + + D WS G ++YE+
Sbjct: 177 GQ-----------------------SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 211
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ FGL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 110/247 (44%), Gaps = 51/247 (20%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVR--LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
L+R + I D E +G G FG VR + R + A+K LK+ ++ E +
Sbjct: 332 LKRDNLLIADIE----LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT--EKADTEEMMR 385
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIA 213
E ++ ++D+ IV+L Q ++ L L+ME GG + L+ RE+I +VA +
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAEL-LH 443
Query: 214 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPL--EDKYSSILLEDEDII 271
+ + + + + N+VHR++ N++L + K+SDFGL K L +D Y +
Sbjct: 444 QVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT--------- 494
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+ + G+W L + APE + + + D WS G
Sbjct: 495 -----ARSAGKW-----------------------PLKWYAPECINFRKFSSRSDVWSYG 526
Query: 332 AIMYEML 338
M+E L
Sbjct: 527 VTMWEAL 533
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 96/238 (40%), Gaps = 51/238 (21%)
Query: 111 LTLIGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
++ +GKG FG V LCR TG + A+K+L+ S Q + E +L + S
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS---GPDQQRDFQREIQILKALHSD 84
Query: 167 CIVQ---LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSI 222
IV+ + Y L L+MEYLP G + L R L Y ++ + +
Sbjct: 85 FIVKYRGVSYG-PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 143
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCK--PLEDKYSSILLEDEDIINQETVSEAE 280
VHRD+ N++++ H+K++DFGL K PL+ Y V
Sbjct: 144 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDY--------------YVVREP 189
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
GQ + + APE L + + D WS G ++YE+
Sbjct: 190 GQ-----------------------SPIFWYAPESLSDNIFSRQSDVWSFGVVLYELF 224
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLV-THLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ D GL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + ++ I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG 222
Query: 342 PPFCSDD 348
F D
Sbjct: 223 VLFPGTD 229
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---------KSEMLKRGQVEHVRSERN 158
++ L+ +G GA+G V TG A+KKL K + ++H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ D GL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 106/251 (42%), Gaps = 57/251 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEM----LKRGQVE-----HVRSERN 158
++ L+ +G GA+G V TG A+KKL + KR E H++ E N
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE-N 82
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA 218
++ +D + F D +YL+ +L G D+ ++ + L++D +F I + +
Sbjct: 83 VIGLLDVFTPARSLEEFND---VYLVT-HLMGADLNNIVKCQK-LTDDHVQFLIYQILRG 137
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ IH + +HRD+KP NL ++++ LK+ D GL + +D+ +
Sbjct: 138 LKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGY--------------- 182
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEM 337
V T Y APE++L Y D WS+G IM E+
Sbjct: 183 --------------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 338 LIGYPPFCSDD 348
L G F D
Sbjct: 217 LTGRTLFPGTD 227
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 93/239 (38%), Gaps = 49/239 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
+MM E + ++ Y APEV+L GY D WS+G IM EM+ G
Sbjct: 179 SFMMTPEVVTRY----------------YRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + ++ I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGG 222
Query: 342 PPFCSDD 348
F D
Sbjct: 223 VLFPGTD 229
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 104/236 (44%), Gaps = 50/236 (21%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + + ++ A+K LK M V+ E NL+ + +V+L+
Sbjct: 21 LGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYA 75
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMRED---ILSEDVARFYIAESVLAIHSIHQHNYVHR 230
+ +Y+I EY+ G ++ L ++ +L + F A+ + I + NY+HR
Sbjct: 76 VVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFS-AQIAEGMAYIERKNYIHR 134
Query: 231 DIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERL 290
D++ N+++ ++ K++DFGL + +ED N+ T E P
Sbjct: 135 DLRAANVLVSESLMCKIADFGLARVIED-------------NEYTAREGAK---FP---- 174
Query: 291 QQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++YE++ I YP
Sbjct: 175 -----------------IKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYP 213
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 101/265 (38%), Gaps = 78/265 (29%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK-----------------KSEMLKRGQV 150
+E + IG GA+G V R +G A+K ++ + +L+R +
Sbjct: 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEA 70
Query: 151 -EHVRSERNL----LAEVDSRCIVQLFYSFQDSDF-LYLIMEYLPGGDIMTL--LMREDI 202
EH R + + D V L + D D YL PG T+ LMR+ +
Sbjct: 71 FEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFL 130
Query: 203 LSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSS 262
D +H + VHRD+KP+N+++ G +KL+DFGL
Sbjct: 131 RGLDF--------------LHANCIVHRDLKPENILVTSGGTVKLADFGLA--------- 167
Query: 263 ILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYG 322
R+ ++ AL V TL Y APEVLL+ Y
Sbjct: 168 --------------------------RIYSYQ---MALT-PVVVTLWYRAPEVLLQSTYA 197
Query: 323 MECDWWSLGAIMYEMLIGYPPFCSD 347
D WS+G I EM P FC +
Sbjct: 198 TPVDMWSVGCIFAEMFRRKPLFCGN 222
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 100/242 (41%), Gaps = 50/242 (20%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEVDS---- 165
L+GKG FG V T A+K + ++ +L + + E LL +V +
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGH 97
Query: 166 RCIVQLFYSFQDSDFLYLIMEY-LPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
+++L F+ + L++E LP D+ + + L E +R + + V AI H
Sbjct: 98 PGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHS 157
Query: 225 HNYVHRDIKPDNLILD-KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
VHRDIK +N+++D + G KL DFG S LL DE + +
Sbjct: 158 RGVVHRDIKDENILIDLRRGCAKLIDFG---------SGALLHDEPYTDFD--------- 199
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGY-GMECDWWSLGAIMYEMLIGYP 342
GT Y PE + + Y + WSLG ++Y+M+ G
Sbjct: 200 ----------------------GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDI 237
Query: 343 PF 344
PF
Sbjct: 238 PF 239
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 94/247 (38%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + ++ I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLVGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 342 PPFCSDD 348
F D
Sbjct: 223 VLFPGTD 229
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 121/278 (43%), Gaps = 51/278 (18%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK-KSEMLKRGQVEHVRSERNLLAEV 163
+ DFE + +G+G FG V + K +A+K+++ + L R E V E LA++
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR---EKVMREVKALAKL 60
Query: 164 DSRCIVQLFYSFQDSD------------FLYLIMEYLPGGDIMTLLMREDILSE---DVA 208
+ IV+ F ++ + + +LY+ M+ ++ + + E V
Sbjct: 61 EHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC 120
Query: 209 RFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDE 268
+ A+ +H +HRD+KP N+ + +K+ DFGL + D+
Sbjct: 121 LHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM----------DQ 170
Query: 269 DIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWW 328
D E E + P + + R+ VGT YM+PE + Y + D +
Sbjct: 171 D--------EEEQTVLTP---MPAYARHT-----GQVGTKLYMSPEQIHGNSYSHKVDIF 214
Query: 329 SLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFP 366
SLG I++E+L PF + R+ R + + + LKFP
Sbjct: 215 SLGLILFELLY---PFSTQMERV--RTLTDVRN-LKFP 246
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 77/277 (27%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSE-RNLLAEVD 164
+D + +IG+G FG+V R K G L+ +KR + + + R+ E++
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELE 67
Query: 165 SRC-------IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
C I+ L + + +LYL +EY P G+++ L + +L D A F IA S
Sbjct: 68 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA-FAIANSTA 126
Query: 218 AIHS-----------------IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ S + Q ++HRD+ N+++ +N K++DFGL +
Sbjct: 127 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR------ 180
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG 320
+++ ++T+ +WM + +L+Y
Sbjct: 181 ------GQEVYVKKTMGRLPVRWM-------------------AIESLNYSV-------- 207
Query: 321 YGMECDWWSLGAIMYEML-IGYPPFCSDDPRITCRKI 356
Y D WS G +++E++ +G P+C +TC ++
Sbjct: 208 YTTNSDVWSYGVLLWEIVSLGGTPYCG----MTCAEL 240
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 116/277 (41%), Gaps = 77/277 (27%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSE-RNLLAEVD 164
+D + +IG+G FG+V R K G L+ +KR + + + R+ E++
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELE 77
Query: 165 SRC-------IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
C I+ L + + +LYL +EY P G+++ L + +L D A F IA S
Sbjct: 78 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA-FAIANSTA 136
Query: 218 AIHS-----------------IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ S + Q ++HRD+ N+++ +N K++DFGL +
Sbjct: 137 STLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSR------ 190
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG 320
+++ ++T+ +WM + +L+Y
Sbjct: 191 ------GQEVYVKKTMGRLPVRWM-------------------AIESLNYSV-------- 217
Query: 321 YGMECDWWSLGAIMYEML-IGYPPFCSDDPRITCRKI 356
Y D WS G +++E++ +G P+C +TC ++
Sbjct: 218 YTTNSDVWSYGVLLWEIVSLGGTPYCG----MTCAEL 250
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 89 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 134
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 181
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 182 ----------------------HDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 90 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 135
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 182
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 183 ----------------------HDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 221 CILAEMLSNRPIF 233
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 51/272 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 275 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 328
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y++ EY+ G ++ L E + + A+ + + + NYVHRD
Sbjct: 329 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 388
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 389 LRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------------- 420
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDDPR 350
R+ + + + APE L + ++ D WS G ++ E+ G P+ P
Sbjct: 421 -----RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY----PG 467
Query: 351 ITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
+ R++++ + + P P+ + DL+C
Sbjct: 468 MVNREVLDQVERGYRMPCPPECPESLHDLMCQ 499
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y+++EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEXTA--------- 171
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 172 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 217 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 250
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 115/290 (39%), Gaps = 66/290 (22%)
Query: 114 IGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
+G+G FG+V LCR TGE A+K LK + ++ E +L + IV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 86
Query: 170 QL--FYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSEDVARFYIAESVLAIHSIHQHN 226
+ + + + LIME+LP G + L + ++ ++ Y + + +
Sbjct: 87 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLE-DKYSSILLEDEDIINQETVSEAEGQWMM 285
YVHRD+ N++++ +K+ DFGL K +E DK + +D D
Sbjct: 147 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRD---------------- 190
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+ + APE L++ + + D WS G ++E+L +C
Sbjct: 191 --------------------SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT----YC 226
Query: 346 SDDP---------------RITCRKIVN-WKTCLKFPEEPKISDEARDLI 379
D ++T ++VN K + P P DE L+
Sbjct: 227 DSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLM 276
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 85 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 130
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLAR----------VADPD--- 177
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 178 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 89 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 134
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR----------VADPD--- 181
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 182 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 85 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 130
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR----------VADPD--- 177
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 178 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 91/237 (38%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 122
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 179
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 216
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM + ++ Y APEV+L GY D WS+G IM EM+
Sbjct: 217 SFMMTPYVVTRY----------------YRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 85 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 130
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR----------VADPD--- 177
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 178 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 83 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 128
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 175
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 176 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 214 CILAEMLSNRPIF 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 90 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 135
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 136 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 182
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 183 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 220
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 221 CILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 91 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 136
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 137 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 183
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 184 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 221
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 222 CILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 82 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 127
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 128 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 174
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 175 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 212
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 213 CILAEMLSNRPIF 225
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/278 (22%), Positives = 120/278 (43%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++MEY+ G ++ D L ++ ++ A+ + + +
Sbjct: 80 AVVSEEPIYIVMEYMSKGCLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 171
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 172 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 217 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 250
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 89 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 134
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 181
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 182 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 83 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 128
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 129 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 175
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 176 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 213
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 214 CILAEMLSNRPIF 226
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 89 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 134
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR----------VADPD--- 181
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 182 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKXVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 85 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 130
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 177
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 178 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 87 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 132
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 133 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 179
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 180 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 217
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 218 CILAEMLSNRPIF 230
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 93/247 (37%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKVVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 342 PPFCSDD 348
F D
Sbjct: 223 VLFPGTD 229
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 93 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 138
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 139 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 185
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 186 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 223
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 224 CILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 85 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 130
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 131 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 177
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 178 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 215
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 216 CILAEMLSNRPIF 228
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKIRHEKLVQL-Y 79
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 171
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 172 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 217 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 250
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 43/242 (17%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+ L+ IG+GA+G V A+KK+ E Q +R + LLA
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENI 85
Query: 168 I----VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIH 223
I + + + +Y++ + L D+ LL + LS D +++ + + + IH
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 143
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 144 SANVLHRDLKPSNLLLNTTSDLKICDFGLAR----------VADPD-------------- 179
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYP 342
+ V T Y APE++L KGY D WS+G I+ EML P
Sbjct: 180 -----------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 343 PF 344
F
Sbjct: 229 IF 230
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 115/290 (39%), Gaps = 66/290 (22%)
Query: 114 IGKGAFGEVRLCR----AKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
+G+G FG+V LCR TGE A+K LK + ++ E +L + IV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES--GGNHIADLKKEIEILRNLYHENIV 74
Query: 170 QL--FYSFQDSDFLYLIMEYLPGGDIMTLLMR-EDILSEDVARFYIAESVLAIHSIHQHN 226
+ + + + LIME+LP G + L + ++ ++ Y + + +
Sbjct: 75 KYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLE-DKYSSILLEDEDIINQETVSEAEGQWMM 285
YVHRD+ N++++ +K+ DFGL K +E DK + +D D
Sbjct: 135 YVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRD---------------- 178
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFC 345
+ + APE L++ + + D WS G ++E+L +C
Sbjct: 179 --------------------SPVFWYAPECLMQSKFYIASDVWSFGVTLHELLT----YC 214
Query: 346 SDDP---------------RITCRKIVN-WKTCLKFPEEPKISDEARDLI 379
D ++T ++VN K + P P DE L+
Sbjct: 215 DSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLM 264
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 89 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 134
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 181
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 182 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 100/262 (38%), Gaps = 71/262 (27%)
Query: 91 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV 150
RE E R+ KI IG G GEV R + G+ +K LK G
Sbjct: 44 REIEASRIHIEKI----------IGSGDSGEVCYGRLRVPGQRDVPVAIKA---LKAGYT 90
Query: 151 EHVR----SERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSED 206
E R SE +++ + D I++L ++ EY+ G + T L D
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD----- 145
Query: 207 VARFYIAESVLAIHSIHQH-------NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDK 259
+F I + V + + YVHRD+ N+++D N K+SDFGL + LED
Sbjct: 146 -GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED- 203
Query: 260 YSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVL 316
D D AY+T G + + APE +
Sbjct: 204 -------DPDA------------------------------AYTTTGGKIPIRWTAPEAI 226
Query: 317 LKKGYGMECDWWSLGAIMYEML 338
+ + D WS G +M+E+L
Sbjct: 227 AFRTFSSASDVWSFGVVMWEVL 248
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 105/240 (43%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV + K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 95
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y++ EY+P G+++ L RE++ + V Y+A + A+ + + N++H
Sbjct: 96 VCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTA--VVLLYMATQISSAMEYLEKKNFIH 153
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + L D ++ +W P+
Sbjct: 154 RDLAARNCLVGENHVVKVADFGLSR----------LMTGDTYTAHAGAKFPIKWTAPE-- 201
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+LAY+T + ++ D W+ G +++E+ G P+ D
Sbjct: 202 ---------SLAYNT----------------FSIKSDVWAFGVLLWEIATYGMSPYPGID 236
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 105 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKTQH-LSNDHICYFL 150
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 151 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 197
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 198 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 235
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 236 CILAEMLSNRPIF 248
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y+++EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 80 AVVSEEPIYIVIEYMSKGSLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 171
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 172 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 217 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 250
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 83
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 84 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 140
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 141 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 177
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 178 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 118/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 245
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L + ++ A+ + + +
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLL------DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 337
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 338 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 383 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 416
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 85
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 142
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 179
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 180 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 53/238 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK-----SEMLKRGQVEHVRSERNLLAEVDSRCI 168
+G+G FG V + A+KKL +E LK + E ++A+ +
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELK----QQFDQEIKVMAKCQHENL 92
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED---ILSEDVARFYIAESVL-AIHSIHQ 224
V+L D D L L+ Y+P G ++ L D LS + R IA+ I+ +H+
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM-RCKIAQGAANGINFLHE 151
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
++++HRDIK N++LD+ K+SDFGL + SE Q +
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLAR---------------------ASEKFAQTV 190
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
M VGT YMAPE L+ + D +S G ++ E++ G P
Sbjct: 191 MXSR---------------IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 85 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM E + ++ Y APEV+L GY D WS+G IM EM+
Sbjct: 179 SFMMEPEVVTRY----------------YRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 118/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 245
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L + ++ A+ + + +
Sbjct: 246 AVVSEEPIYIVTEYMSKGSLL------DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 337
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 338 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 383 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 416
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 122
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 123 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 179
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 180 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 216
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 217 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 85
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 86 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 142
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 179
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 180 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 53/238 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK-----SEMLKRGQVEHVRSERNLLAEVDSRCI 168
+G+G FG V + A+KKL +E LK + E ++A+ +
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELK----QQFDQEIKVMAKCQHENL 92
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED---ILSEDVARFYIAESVL-AIHSIHQ 224
V+L D D L L+ Y+P G ++ L D LS + R IA+ I+ +H+
Sbjct: 93 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM-RCKIAQGAANGINFLHE 151
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
++++HRDIK N++LD+ K+SDFGL + SE Q +
Sbjct: 152 NHHIHRDIKSANILLDEAFTAKISDFGLAR---------------------ASEKFAQTV 190
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
M VGT YMAPE L+ + D +S G ++ E++ G P
Sbjct: 191 MXXR---------------IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 64/257 (24%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKK-----------------LKKSEMLKR 147
+ +E+L IG+G FGEV R + TG+ A+KK +K ++LK
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 148 GQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV 207
V ++ A +RC ++ F DF E+ G + +L++ + ++
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVF---DFC----EHDLAGLLSNVLVKFTL--SEI 127
Query: 208 ARFYIAESVL-AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
R + + +L ++ IH++ +HRD+K N+++ ++G LKL+DFGL + +S
Sbjct: 128 KR--VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS---- 181
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMEC 325
+ NR + V TL Y PE+LL ++ YG
Sbjct: 182 ---------------------------QPNRYX---NRVVTLWYRPPELLLGERDYGPPI 211
Query: 326 DWWSLGAIMYEMLIGYP 342
D W G IM EM P
Sbjct: 212 DLWGAGCIMAEMWTRSP 228
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 77
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 134
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 171
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 172 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 77
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 78 IISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME---LDHERMSYLLYQMLXGIKH 134
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 135 LHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR-----------------------TAGT 171
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 172 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 78
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 135
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 172
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 173 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 93/247 (37%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 342 PPFCSDD 348
F D
Sbjct: 223 VLFPGTD 229
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 78
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L YL+ME + + M L + + + + + I
Sbjct: 79 IISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 135
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 172
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 173 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 193 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGNM----SPEAFLQEAQVMKKLRHEKLVQL-Y 246
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 247 AVVSEEPIYIVTEYMSKGSLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 300
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 301 NYVHRDLRAANILVGENLVCKVADFGLGRLIED-------------NEYTA--------- 338
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 339 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 383
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 384 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 417
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 93/247 (37%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 86
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 87 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 143
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 144 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 180
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 181 SFMM----------------VPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 224
Query: 342 PPFCSDD 348
F D
Sbjct: 225 VLFPGTD 231
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM E + ++ Y APEV+L GY D WS+G IM EM+
Sbjct: 179 SFMMEPEVVTRY----------------YRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 134/318 (42%), Gaps = 65/318 (20%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---KSEMLKRGQVEHVRSERN 158
++ DD E + +G+GA+G V R +G+I A+K+++ S+ KR ++ S R
Sbjct: 3 EVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRT 62
Query: 159 LLAEVDSRCIVQLFYS-FQDSDFLYLIMEYLPGG---DIMTLLMREDILSEDVARFYIAE 214
VD V + + F++ D +++ ME + ++ + + ED+
Sbjct: 63 ----VDCPFTVTFYGALFREGD-VWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS 117
Query: 215 SVLAIHSIHQH-NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
V A+ +H + +HRD+KP N++++ G +K+ DFG+ L D + +DI
Sbjct: 118 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA------KDI--- 168
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEV----LLKKGYGMECDWWS 329
G YMAPE L +KGY ++ D WS
Sbjct: 169 ------------------------------DAGCKPYMAPERINPELNQKGYSVKSDIWS 198
Query: 330 LGAIMYEMLIGYPPFCS-DDPRITCRKIVNWKTCLKFPEEP--KISDEARDLICHLLCDV 386
LG M E+ I P+ S P +++V + P+ P K S E D L
Sbjct: 199 LGITMIELAILRFPYDSWGTPFQQLKQVVEEPS----PQLPADKFSAEFVDFTSQCLKKN 254
Query: 387 ETRLGTRGVEELKEHPWF 404
T EL +HP+F
Sbjct: 255 SKERPTY--PELMQHPFF 270
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 109/259 (42%), Gaps = 68/259 (26%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKK-----------------LKKSEMLKR 147
+ +E+L IG+G FGEV R + TG+ A+KK +K ++LK
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 148 GQVEHVRSERNLLAEVDSRC--IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE 205
V ++ A +RC + L + F + D +++ ++ + LSE
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL----------AGLLSNVLVKFTLSE 126
Query: 206 DVARFYIAESVL-AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSIL 264
+ R + + +L ++ IH++ +HRD+K N+++ ++G LKL+DFGL +
Sbjct: 127 -IKR--VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFS------- 176
Query: 265 LEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGM 323
+ K NR V TL Y PE+LL ++ YG
Sbjct: 177 --------------------LAKNSQPNRYXNR-------VVTLWYRPPELLLGERDYGP 209
Query: 324 ECDWWSLGAIMYEMLIGYP 342
D W G IM EM P
Sbjct: 210 PIDLWGAGCIMAEMWTRSP 228
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 108/253 (42%), Gaps = 65/253 (25%)
Query: 108 FEQLTLIGKGAFG----------EVRLCRAKTT---GEIFAMKKLKKSEMLKRGQVEHVR 154
+ L+ IG+GA+G +VR+ K + + + + L++ ++L R + E++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 155 SERNLLAEVDSRCIVQL--FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYI 212
++ + + I Q+ Y QD +ME D+ LL + LS D +++
Sbjct: 89 GINDI---IRAPTIEQMKDVYIVQD------LME----TDLYKLLKCQH-LSNDHICYFL 134
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + IH N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 135 YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD--- 181
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLG 331
+ V T Y APE++L KGY D WS+G
Sbjct: 182 ----------------------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 332 AIMYEMLIGYPPF 344
I+ EML P F
Sbjct: 220 CILAEMLSNRPIF 232
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 116/277 (41%), Gaps = 77/277 (27%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSE-RNLLAEVD 164
+D + +IG+G FG+V R K G L+ +KR + + + R+ E++
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDG-------LRMDAAIKRMKEYASKDDHRDFAGELE 74
Query: 165 SRC-------IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
C I+ L + + +LYL +EY P G+++ L + +L D A F IA S
Sbjct: 75 VLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPA-FAIANSTA 133
Query: 218 AIHS-----------------IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ S + Q ++HR++ N+++ +N K++DFGL +
Sbjct: 134 STLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSR------ 187
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG 320
+++ ++T+ +WM + +L+Y
Sbjct: 188 ------GQEVYVKKTMGRLPVRWM-------------------AIESLNYSV-------- 214
Query: 321 YGMECDWWSLGAIMYEML-IGYPPFCSDDPRITCRKI 356
Y D WS G +++E++ +G P+C +TC ++
Sbjct: 215 YTTNSDVWSYGVLLWEIVSLGGTPYCG----MTCAEL 247
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 102/238 (42%), Gaps = 53/238 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKK-----SEMLKRGQVEHVRSERNLLAEVDSRCI 168
+G+G FG V + A+KKL +E LK + E ++A+ +
Sbjct: 33 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELK----QQFDQEIKVMAKCQHENL 86
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED---ILSEDVARFYIAESVL-AIHSIHQ 224
V+L D D L L+ Y+P G ++ L D LS + R IA+ I+ +H+
Sbjct: 87 VELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHM-RCKIAQGAANGINFLHE 145
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
++++HRDIK N++LD+ K+SDFGL + SE Q +
Sbjct: 146 NHHIHRDIKSANILLDEAFTAKISDFGLAR---------------------ASEKFAQXV 184
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
M VGT YMAPE L+ + D +S G ++ E++ G P
Sbjct: 185 MXXR---------------IVGTTAYMAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 99/242 (40%), Gaps = 43/242 (17%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+ L+ IG+GA+G V A+KK+ E Q +R + LLA
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQ-RTLREIKILLAFRHENI 85
Query: 168 I----VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIH 223
I + + + +Y++ + L D+ LL + LS D +++ + + + IH
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQD-LMETDLYKLLKTQH-LSNDHICYFLYQILRGLKYIH 143
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
N +HRD+KP NL+L+ LK+ DFGL + + D D
Sbjct: 144 SANVLHRDLKPSNLLLNTTCDLKICDFGLAR----------VADPD-------------- 179
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYP 342
+ V T Y APE++L KGY D WS+G I+ EML P
Sbjct: 180 -----------HDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRP 228
Query: 343 PF 344
F
Sbjct: 229 IF 230
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 17 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 70
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 71 AVVSEEPIYIVTEYMSKGSLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 124
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 125 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 162
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 163 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 207
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 208 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 241
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 171
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 172 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 217 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 250
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 15 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 68
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 69 AVVSEEPIYIVTEYMSKGSLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 122
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 123 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 160
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 161 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 205
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 206 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 239
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 97/259 (37%), Gaps = 65/259 (25%)
Query: 91 RETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV 150
RE E R+ KI IG G GEV R + G+ +K LK G
Sbjct: 44 REIEASRIHIEKI----------IGSGDSGEVCYGRLRVPGQRDVPVAIKA---LKAGYT 90
Query: 151 EHVR----SERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSED 206
E R SE +++ + D I++L ++ EY+ G + T L D
Sbjct: 91 ERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHD----- 145
Query: 207 VARFYIAESVLAIHSIHQH-------NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDK 259
+F I + V + + YVHRD+ N+++D N K+SDFGL + LED
Sbjct: 146 -GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLED- 203
Query: 260 YSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKK 319
D D T + +W APE + +
Sbjct: 204 -------DPDAAXTTTGGKIPIRW---------------------------TAPEAIAFR 229
Query: 320 GYGMECDWWSLGAIMYEML 338
+ D WS G +M+E+L
Sbjct: 230 TFSSASDVWSFGVVMWEVL 248
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 118/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 192 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 245
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L + ++ A+ + + +
Sbjct: 246 AVVSEEPIYIVGEYMSKGSLL------DFLKGETGKYLRLPQLVDMAAQIASGMAYVERM 299
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 300 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 337
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 338 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 383 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 416
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 117/272 (43%), Gaps = 51/272 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 19 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 72
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y++ EY+ G ++ L E + + A+ + + + NYVHRD
Sbjct: 73 AVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 132
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 133 LRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------------- 164
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDDPR 350
R+ + + + APE L + ++ D WS G ++ E+ G P+ P
Sbjct: 165 -----RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY----PG 211
Query: 351 ITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
+ R++++ + + P P+ + DL+C
Sbjct: 212 MVNREVLDQVERGYRMPCPPECPESLHDLMCQ 243
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 49/255 (19%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTG--EIFAMKKLKKSEMLKRGQV 150
E +R ++I I + +IG G FGEV K G EIF K KS ++ Q
Sbjct: 20 NEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QR 78
Query: 151 EHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF 210
SE +++ + D ++ L S + +I E++ G + + L + D +F
Sbjct: 79 RDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND------GQF 132
Query: 211 YIAESVLAIHSIHQ-------HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSI 263
+ + V + I NYVHRD+ N++++ N K+SDFGL + LED S
Sbjct: 133 TVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS-- 190
Query: 264 LLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGM 323
T + A G + + + APE + + +
Sbjct: 191 ---------DPTYTSALGGKI----------------------PIRWTAPEAIQYRKFTS 219
Query: 324 ECDWWSLGAIMYEML 338
D WS G +M+E++
Sbjct: 220 ASDVWSYGIVMWEVM 234
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 93/247 (37%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 85
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 86 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 142
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 143 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 179
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 180 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 223
Query: 342 PPFCSDD 348
F D
Sbjct: 224 VLFPGTD 230
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 80 AVVSEEPIYIVCEYMSKGSLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 171
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 172 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 217 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 250
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 51/272 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA--IHSIHQHNYVHRD 231
+ + +Y++ EY+ G ++ L E + + + +A + + + NYVHRD
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ +N K++DFGL + +ED
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIEDN-------------------------------- 164
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDDPR 350
+W + A + + APE L + ++ D WS G ++ E+ G P+ P
Sbjct: 165 EWTARQGAKF-----PIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY----PG 215
Query: 351 ITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
+ R++++ + + P P+ + DL+C
Sbjct: 216 MVNREVLDQVERGYRMPCPPECPESLHDLMCQ 247
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 93/247 (37%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 342 PPFCSDD 348
F D
Sbjct: 223 VLFPGTD 229
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 120/281 (42%), Gaps = 60/281 (21%)
Query: 135 AMKKLKKSEMLKRGQVEH---VRSERNLLAEVDS--RCIVQLFYSFQDSDFLYLIMEYL- 188
A+K ++K + G++ + V E LL +V S +++L F+ D LI+E
Sbjct: 80 AIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPE 139
Query: 189 PGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKN-GHLKL 247
P D+ + L E++AR + + + A+ H +HRDIK +N+++D N G LKL
Sbjct: 140 PVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKL 199
Query: 248 SDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGT 307
DFG S LL+D + + GT
Sbjct: 200 IDFG---------SGALLKDTVYTDFD-------------------------------GT 219
Query: 308 LDYMAPE-VLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFP 366
Y PE + + +G WSLG ++Y+M+ G PF D+ +I+ + +
Sbjct: 220 RVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR-- 271
Query: 367 EEPKISDEARDLICHLLCDVETRLGTRGVEELKEHPWFRGI 407
++S E + LI L + T EE++ HPW + +
Sbjct: 272 --QRVSSECQHLIRWCLALRPSDRPT--FEEIQNHPWMQDV 308
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 91/239 (38%), Gaps = 49/239 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 68/259 (26%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKK-----------------LKKSEMLKR 147
+ +E+L IG+G FGEV R + TG+ A+KK +K ++LK
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 148 GQVEHVRSERNLLAEVDSRC--IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE 205
V ++ A +RC + L + F + D +++ ++ + LSE
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL----------AGLLSNVLVKFTLSE 126
Query: 206 DVARFYIAESVL-AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSIL 264
+ R + + +L ++ IH++ +HRD+K N+++ ++G LKL+DFGL + +S
Sbjct: 127 -IKR--VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS-- 181
Query: 265 LEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGM 323
+ NR + V TL Y PE+LL ++ YG
Sbjct: 182 -----------------------------QPNRYX---NRVVTLWYRPPELLLGERDYGP 209
Query: 324 ECDWWSLGAIMYEMLIGYP 342
D W G IM EM P
Sbjct: 210 PIDLWGAGCIMAEMWTRSP 228
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/272 (22%), Positives = 118/272 (43%), Gaps = 51/272 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA--IHSIHQHNYVHRD 231
+ + +Y++ EY+ G ++ L E + + + +A + + + NYVHRD
Sbjct: 77 AVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRD 136
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 137 LRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------------- 168
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDDPR 350
R+ + + + APE L + ++ D WS G ++ E+ G P+ P
Sbjct: 169 -----RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY----PG 215
Query: 351 ITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
+ R++++ + + P P+ + DL+C
Sbjct: 216 MVNREVLDQVERGYRMPCPPECPESLHDLMCQ 247
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 111/259 (42%), Gaps = 68/259 (26%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKK-----------------LKKSEMLKR 147
+ +E+L IG+G FGEV R + TG+ A+KK +K ++LK
Sbjct: 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 75
Query: 148 GQVEHVRSERNLLAEVDSRC--IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE 205
V ++ A +RC + L + F + D +++ ++ + LSE
Sbjct: 76 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDL----------AGLLSNVLVKFTLSE 125
Query: 206 DVARFYIAESVL-AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSIL 264
+ R + + +L ++ IH++ +HRD+K N+++ ++G LKL+DFGL + +S
Sbjct: 126 -IKR--VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS-- 180
Query: 265 LEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGM 323
+ NR + V TL Y PE+LL ++ YG
Sbjct: 181 -----------------------------QPNRYX---NRVVTLWYRPPELLLGERDYGP 208
Query: 324 ECDWWSLGAIMYEMLIGYP 342
D W G IM EM P
Sbjct: 209 PIDLWGAGCIMAEMWTRSP 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 104/236 (44%), Gaps = 50/236 (21%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + + ++ A+K LK M V+ E NL+ + +V+L+
Sbjct: 20 LGAGQFGEVWMGYYNNSTKV-AVKTLKPGTM----SVQAFLEEANLMKTLQHDKLVRLYA 74
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMRED---ILSEDVARFYIAESVLAIHSIHQHNYVHR 230
+ +Y+I E++ G ++ L ++ +L + F A+ + I + NY+HR
Sbjct: 75 VVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFS-AQIAEGMAYIERKNYIHR 133
Query: 231 DIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERL 290
D++ N+++ ++ K++DFGL + +ED N+ T E P
Sbjct: 134 DLRAANVLVSESLMCKIADFGLARVIED-------------NEYTAREGAK---FP---- 173
Query: 291 QQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ + WS G ++YE++ I YP
Sbjct: 174 -----------------IKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIPYP 212
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGE---IFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
+IG G FGEV R K G+ A+K LK K Q SE +++ + D I+
Sbjct: 21 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPNII 78
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI------- 222
L + +I EY+ G + L + D RF + + V + I
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 132
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
+YVHRD+ N++++ N K+SDFG+ + LED +
Sbjct: 133 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-------------------- 172
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + APE + + + D WS G +M+E++
Sbjct: 173 ------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 213
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 118/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGSLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD+ N+++ +N K++DFGL + +ED N+ T
Sbjct: 134 NYVHRDLAAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 171
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 172 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 217 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 250
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 93/247 (37%), Gaps = 49/247 (19%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 84
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 85 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQME---LDHERMSYLLYQMLCGIKH 141
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 142 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGY 341
+MM V T Y APEV+L GY D WS+G IM EM+ G
Sbjct: 179 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGG 222
Query: 342 PPFCSDD 348
F D
Sbjct: 223 VLFPGTD 229
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGE---IFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
+IG G FGEV R K G+ A+K LK K Q SE +++ + D I+
Sbjct: 15 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPNII 72
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI------- 222
L + +I EY+ G + L + D RF + + V + I
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 126
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
+YVHRD+ N++++ N K+SDFG+ + LED +
Sbjct: 127 SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-------------------- 166
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + APE + + + D WS G +M+E++
Sbjct: 167 ------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 207
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 102/235 (43%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K +K M VE +E N++ + +V+L +
Sbjct: 23 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKL-H 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF--YIAESVLAIHSIHQHNYVHRD 231
+ + +Y+I E++ G ++ L ++ + + + + A+ + I Q NY+HRD
Sbjct: 77 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 136
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ + K++DFGL + +ED N+ T E
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIED-------------NEYTAREG------------ 171
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 172 ------------AKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 214
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 119/278 (42%), Gaps = 63/278 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 79
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--------IAESVLAIHSIHQH 225
+ + +Y++ EY+ G ++ D L ++ ++ A+ + + +
Sbjct: 80 AVVSEEPIYIVTEYMSKGCLL------DFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM 133
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
NYVHRD++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 134 NYVHRDLRAANILVGENLVCKVADFGLARLIED-------------NEYTA--------- 171
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
R+ + + + APE L + ++ D WS G ++ E+ G P+
Sbjct: 172 -----------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY 216
Query: 345 CSDDPRITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
P + R++++ + + P P+ + DL+C
Sbjct: 217 ----PGMVNREVLDQVERGYRMPCPPECPESLHDLMCQ 250
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 103/235 (43%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K +K M VE +E N++ + +V+L +
Sbjct: 196 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKL-H 249
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF--YIAESVLAIHSIHQHNYVHRD 231
+ + +Y+I E++ G ++ L ++ + + + + A+ + I Q NY+HRD
Sbjct: 250 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 309
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ + K++DFGL + +ED N+ T E P
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIED-------------NEYTAREGA---KFP----- 348
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 349 ----------------IKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYP 387
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 89
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 90 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 146
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 147 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 183
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 184 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 109/259 (42%), Gaps = 48/259 (18%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M L + ++ D +G G FGEV K A+K LK+ M +VE
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLK 56
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYI 212
E ++ E+ +VQL Y+I E++ G+++ L R+++ + V Y+
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA--VVLLYM 114
Query: 213 AESVL-AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
A + A+ + + N++HRD+ N ++ +N +K++DFGL + ++
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR---------------LM 159
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+T + G P + + APE L + ++ D W+ G
Sbjct: 160 TGDTXTAHAGA-KFP---------------------IKWTAPESLAYNKFSIKSDVWAFG 197
Query: 332 AIMYEMLI-GYPPFCSDDP 349
+++E+ G P+ DP
Sbjct: 198 VLLWEIATYGMSPYPGIDP 216
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 80
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIED-------------NEXTAREGAK---FP----- 179
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 180 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 218
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 29 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 82
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 83 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 142
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 143 LRAANILVSDTLSCKIADFGLARLIED-------------NEXTAREGAK---FP----- 181
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 182 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 220
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 90/237 (37%), Gaps = 49/237 (20%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
++ L IG GA G V A+KKL + + + E L+ V+ +
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP-FQNQTHAKRAYRELVLMKCVNHKN 78
Query: 168 IVQLFYSFQDSDFL------YLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
I+ L F L Y++ME + + M L + + + + + I
Sbjct: 79 IIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQME---LDHERMSYLLYQMLCGIKH 135
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+H +HRD+KP N+++ + LK+ DFGL + A
Sbjct: 136 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR-----------------------TAGT 172
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+MM V T Y APEV+L GY D WS+G IM EM+
Sbjct: 173 SFMMT----------------PYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 95/239 (39%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGE---IFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
+IG G FGEV R K G+ A+K LK K Q E +++ + D I+
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 86
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ----- 224
L S + ++ EY+ G + T L + D +F + + V + I
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKND------GQFTVIQLVGMLRGISAGMKYL 140
Query: 225 --HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 141 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 180
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + APE + + + D WS G +M+E++
Sbjct: 181 ------------------AYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVV 221
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 30 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 83
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 84 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 143
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 144 LRAANILVSDTLSCKIADFGLARLIED-------------NEXTAREGAK---FP----- 182
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 183 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 221
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 74
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIED-------------NEXTAREGAK---FP----- 173
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 174 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 109/248 (43%), Gaps = 37/248 (14%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKK--------------LKKSEMLKRGQVE 151
D +E LIG G++G V K + A+KK L++ +L R +
Sbjct: 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHD 112
Query: 152 HVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY 211
HV +++ D V+ F D LY+++E + D L L+E +
Sbjct: 113 HVVKVLDIVIPKD----VEKF------DELYVVLE-IADSDFKKLFRTPVYLTELHIKTL 161
Query: 212 IAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
+ ++ + +H +HRD+KP N +++++ +K+ DFGL + ++ E+
Sbjct: 162 LYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD--------YPENGN 213
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPE-VLLKKGYGMECDWWSL 330
+Q +S E M K +R L V T Y APE +LL++ Y D WS+
Sbjct: 214 SQLPISPREDD--MNLVTFPHTKNLKRQLTGHVV-TRWYRAPELILLQENYTEAIDVWSI 270
Query: 331 GAIMYEML 338
G I E+L
Sbjct: 271 GCIFAELL 278
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 74
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIED-------------NEXTAREGAK---FP----- 173
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 174 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 212
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 22 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 75
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 76 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 135
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 136 LRAANILVSDTLSCKIADFGLARLIED-------------NEXTAREGAK---FP----- 174
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 175 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 23 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 77 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 136
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 137 LRAANILVSDTLSCKIADFGLARLIED-------------NEXTAREGAK---FP----- 175
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 176 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 214
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 27 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 80
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 81 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 140
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 141 LRAANILVSDTLSCKIADFGLARLIED-------------NEYTAREGAK---FP----- 179
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 180 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 218
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 31 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 84
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 85 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 144
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLED 258
++ N+++ K++DFGL + +ED
Sbjct: 145 LRAANILVSDTLSCKIADFGLARLIED 171
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 26 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 79
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA--IHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + + +A + I + NY+HRD
Sbjct: 80 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 139
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 140 LRAANILVSDTLSCKIADFGLARLIED-------------NEYTAREGAK---FP----- 178
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 179 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 104/241 (43%), Gaps = 48/241 (19%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 74
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I+E++ G+++ L R+++ + V Y+A + A+ + + N++H
Sbjct: 75 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLEKKNFIH 132
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 133 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTXTAHAGA-KFP--- 173
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 174 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 215
Query: 349 P 349
P
Sbjct: 216 P 216
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 56/247 (22%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+ +IG G+FG V + + E+ A+KK+ + + K +++ +R ++ +
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDEV-AIKKVLQDKRFKNRELQIMR----IVKHPNVVD 96
Query: 168 IVQLFYSF---QDSDFLYLIMEYLPGGDIMTLLMR-----EDILSEDVARFYIAESVLAI 219
+ FYS +D FL L++EY+P + + R + + + + Y+ + + ++
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVP--ETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSL 154
Query: 220 HSIHQHNYVHRDIKPDNLILD-KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
IH HRDIKP NL+LD +G LKL DFG K IL+ E +
Sbjct: 155 AYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAK--------ILIAGEPNV------- 199
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL-KKGYGMECDWWSLGAIMYEM 337
S + + Y APE++ Y D WS G +M E+
Sbjct: 200 ------------------------SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAEL 235
Query: 338 LIGYPPF 344
+ G P F
Sbjct: 236 MQGQPLF 242
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 116/272 (42%), Gaps = 51/272 (18%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G+G FGEV + T + A+K LK M E E ++ ++ +VQL Y
Sbjct: 16 LGQGCFGEVWMGTWNGTTRV-AIKTLKPGTM----SPEAFLQEAQVMKKLRHEKLVQL-Y 69
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + + ++ EY+ G ++ L E + + A+ + + + NYVHRD
Sbjct: 70 AVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRD 129
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ +N K++DFGL + +ED N+ T
Sbjct: 130 LRAANILVGENLVCKVADFGLARLIED-------------NEXTA--------------- 161
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDDPR 350
R+ + + + APE L + ++ D WS G ++ E+ G P+ P
Sbjct: 162 -----RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY----PG 208
Query: 351 ITCRKIVNW-KTCLKFPEEPKISDEARDLICH 381
+ R++++ + + P P+ + DL+C
Sbjct: 209 MVNREVLDQVERGYRMPCPPECPESLHDLMCQ 240
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 109/259 (42%), Gaps = 48/259 (18%)
Query: 96 MRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS 155
M L + ++ D +G G +GEV K A+K LK+ M +VE
Sbjct: 1 MSLDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLK 56
Query: 156 ERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYI 212
E ++ E+ +VQL Y+I E++ G+++ L R+++ + V Y+
Sbjct: 57 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA--VVLLYM 114
Query: 213 AESVL-AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
A + A+ + + N++HRD+ N ++ +N +K++DFGL + ++
Sbjct: 115 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSR---------------LM 159
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+T + G P + + APE L + ++ D W+ G
Sbjct: 160 TGDTFTAHAGA-KFP---------------------IKWTAPESLAYNKFSIKSDVWAFG 197
Query: 332 AIMYEMLI-GYPPFCSDDP 349
+++E+ G P+ DP
Sbjct: 198 VLLWEIATYGMSPYPGIDP 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 75/147 (51%), Gaps = 8/147 (5%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 21 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 74
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLED 258
++ N+++ K++DFGL + +ED
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIED 161
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 57/245 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEVDSRCIVQ 170
+G GA+G V + A+KKL + + H R E LL + ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQ----SLIHARRTYRELRLLKHLKHENVIG 91
Query: 171 LF------YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
L S +D +YL+ L G D+ ++ + LS++ +F + + + + IH
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTT-LMGADLNNIV-KSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRD+KP N+ ++++ L++ DFGL + +++ +
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY--------------------- 188
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPP 343
V T Y APE++L Y D WS+G IM E+L G
Sbjct: 189 --------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 344 FCSDD 348
F D
Sbjct: 229 FPGSD 233
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 102/235 (43%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 16 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 69
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA--IHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + + +A + I + NY+HRD
Sbjct: 70 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 129
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 130 LRAANILVSDTLSCKIADFGLARLIED-------------NEYTAREGAK---FP----- 168
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 169 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 207
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/235 (24%), Positives = 96/235 (40%), Gaps = 49/235 (20%)
Query: 113 LIGKGAFGEVRLCRAKTTG--EIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQ 170
+IG G FGEV K G EIF K KS ++ Q SE +++ + D ++
Sbjct: 14 VIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEK-QRRDFLSEASIMGQFDHPNVIH 72
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ------ 224
L S + +I E++ G + + L + D +F + + V + I
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQND------GQFTVIQLVGMLRGIAAGMKYLA 126
Query: 225 -HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
NYVHR + N++++ N K+SDFGL + LED S T + A G
Sbjct: 127 DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS-----------DPTYTSALGGK 175
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ + + APE + + + D WS G +M+E++
Sbjct: 176 I----------------------PIRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 94/239 (39%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGE---IFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
+IG G FGEV R K G+ A+K LK K Q SE +++ + D I+
Sbjct: 36 VIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDK--QRRDFLSEASIMGQFDHPNII 93
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSI------- 222
L + +I EY+ G + L + D RF + + V + I
Sbjct: 94 HLEGVVTKCKPVMIITEYMENGSLDAFLRKND------GRFTVIQLVGMLRGIGSGMKYL 147
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
+ VHRD+ N++++ N K+SDFG+ + LED +
Sbjct: 148 SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-------------------- 187
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + APE + + + D WS G +M+E++
Sbjct: 188 ------------------AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 228
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 56/259 (21%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+ + + + L IGKG FG+V L G A+K +K + +E +++ +
Sbjct: 190 LNMKELKLLQTIGKGEFGDVML--GDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQ 242
Query: 163 VDSRCIVQLF-YSFQDSDFLYLIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAI 219
+ +VQL ++ LY++ EY+ G ++ L +L D + + A+
Sbjct: 243 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 302
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ +N+VHRD+ N+++ ++ K+SDFGL K S
Sbjct: 303 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------------------EASST 342
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML- 338
+ +P + + APE L +K + + D WS G +++E+
Sbjct: 343 QDTGKLP---------------------VKWTAPEALREKKFSTKSDVWSFGILLWEIYS 381
Query: 339 IGYPPFCSDDPRITCRKIV 357
G P+ PRI + +V
Sbjct: 382 FGRVPY----PRIPLKDVV 396
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 50/234 (21%)
Query: 114 IGKGAFGEVRL-CRAKT---TGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
+G+G FG+V L C T TGE+ A+K LK + + E ++L + I+
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQ--HRSGWKQEIDILRTLYHEHII 96
Query: 170 QLFYSFQDSDF--LYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQH 225
+ +D+ L L+MEY+P G + L R I + F I E + +H+ H
Sbjct: 97 KYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH-- 154
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSI-LLEDEDIINQETVSEAEGQWM 284
Y+HRD+ N++LD + +K+ DFGL K + + + + ED D
Sbjct: 155 -YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD--------------- 198
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ + APE L + + D WS G +YE+L
Sbjct: 199 ---------------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 56/259 (21%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+ + + + L IGKG FG+V L G A+K +K + +E +++ +
Sbjct: 18 LNMKELKLLQTIGKGEFGDVML--GDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQ 70
Query: 163 VDSRCIVQLF-YSFQDSDFLYLIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAI 219
+ +VQL ++ LY++ EY+ G ++ L +L D + + A+
Sbjct: 71 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 130
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ +N+VHRD+ N+++ ++ K+SDFGL K S
Sbjct: 131 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------------------EASST 170
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML- 338
+ +P + + APE L +K + + D WS G +++E+
Sbjct: 171 QDTGKLP---------------------VKWTAPEALREKKFSTKSDVWSFGILLWEIYS 209
Query: 339 IGYPPFCSDDPRITCRKIV 357
G P+ PRI + +V
Sbjct: 210 FGRVPY----PRIPLKDVV 224
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 107/259 (41%), Gaps = 56/259 (21%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+ + + + L IGKG FG+V L G A+K +K + +E +++ +
Sbjct: 3 LNMKELKLLQTIGKGEFGDVML--GDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQ 55
Query: 163 VDSRCIVQLF-YSFQDSDFLYLIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAI 219
+ +VQL ++ LY++ EY+ G ++ L +L D + + A+
Sbjct: 56 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 115
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ +N+VHRD+ N+++ ++ K+SDFGL K S
Sbjct: 116 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------------------EASST 155
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML- 338
+ +P + + APE L +K + + D WS G +++E+
Sbjct: 156 QDTGKLP---------------------VKWTAPEALREKKFSTKSDVWSFGILLWEIYS 194
Query: 339 IGYPPFCSDDPRITCRKIV 357
G P+ PRI + +V
Sbjct: 195 FGRVPY----PRIPLKDVV 209
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 90/238 (37%), Gaps = 50/238 (21%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+G FGEV R + + A+K + E L E +L + IV+L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
+Y++ME + GGD +T L E L + ++ + + +HRD+
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
N ++ + LK+SDFG+ + EA+G
Sbjct: 240 AARNCLVTEKNVLKISDFGMSR----------------------EEADG----------- 266
Query: 293 WKRNRRALAYSTVGTL-----DYMAPEVLLKKGYGMECDWWSLGAIMYEML-IGYPPF 344
Y+ G L + APE L Y E D WS G +++E +G P+
Sbjct: 267 --------VYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 101/235 (42%), Gaps = 49/235 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 17 LGAGQFGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 70
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HR+
Sbjct: 71 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRN 130
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
++ N+++ K++DFGL + +ED N+ T E P
Sbjct: 131 LRAANILVSDTLSCKIADFGLARLIED-------------NEYTAREGAK---FP----- 169
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----IGYP 342
+ + APE + + ++ D WS G ++ E++ I YP
Sbjct: 170 ----------------IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYP 208
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 57/245 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEVDSRCIVQ 170
+G GA+G V + A+KKL + + H R E LL + ++
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQ----SLIHARRTYRELRLLKHLKHENVIG 91
Query: 171 LF------YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
L S +D +YL+ L G D+ ++ + LS++ +F + + + + IH
Sbjct: 92 LLDVFTPATSIEDFSEVYLVTT-LMGADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRD+KP N+ ++++ L++ DFGL + +++ +
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGY--------------------- 188
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPP 343
V T Y APE++L Y D WS+G IM E+L G
Sbjct: 189 --------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 228
Query: 344 FCSDD 348
F D
Sbjct: 229 FPGSD 233
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 54/263 (20%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK-KSEMLKRGQVEHVRSERNLLAEV 163
+D +E +LIGKG+FG+V + E A+K +K K L + Q+E E L+ +
Sbjct: 34 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKH 91
Query: 164 DSRC---IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAE--SV 216
D+ IV L F + L L+ E L ++ LL + +S ++ R + + +
Sbjct: 92 DTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA 150
Query: 217 LAIHSIHQHNYVHRDIKPDNLIL--DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
L + + + +H D+KP+N++L K +K+ DFG SS L
Sbjct: 151 LLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG---------SSCQL--------- 192
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIM 334
GQ + Y + + Y +PEVLL Y + D WSLG I+
Sbjct: 193 ------GQRI-----------------YQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCIL 229
Query: 335 YEMLIGYPPFCSDDPRITCRKIV 357
EM G P F + KIV
Sbjct: 230 VEMHTGEPLFSGANEVDQMNKIV 252
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 40/254 (15%)
Query: 108 FEQLTLIGKGAFGEVRLC-RAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS- 165
+E + +G+GAFG+V C K G A+K +K + E RSE +L +++
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY----CEAARSEIQVLEHLNTT 71
Query: 166 ------RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE--DVARFYIAESVL 217
RC VQ+ F+ + ++ E L G + L D R +
Sbjct: 72 DPNSTFRC-VQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDE-DIINQETV 276
+++ +H + H D+KP+N++ + SD+ + Y+ + DE +IN +
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQ------SDY------TEAYNPKIKRDERTLINPDIK 177
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G E + V T Y APEV+L G+ CD WS+G I+ E
Sbjct: 178 VVDFGSATYDDEHHS-----------TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIE 226
Query: 337 MLIGYPPFCSDDPR 350
+G+ F + D +
Sbjct: 227 YYLGFTVFPTHDSK 240
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 92/233 (39%), Gaps = 40/233 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG+G FGEV R + + A+K + E L E +L + IV+L
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCR--ETLPPDLKAKFLQEARILKQYSHPNIVRLIG 179
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDI-LSEDVARFYIAESVLAIHSIHQHNYVHRDI 232
+Y++ME + GGD +T L E L + ++ + + +HRD+
Sbjct: 180 VCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDL 239
Query: 233 KPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQ 292
N ++ + LK+SDFG+ + E+ D + + + G +P
Sbjct: 240 AARNCLVTEKNVLKISDFGMSR-----------EEADGVX----AASGGLRQVP------ 278
Query: 293 WKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML-IGYPPF 344
+ + APE L Y E D WS G +++E +G P+
Sbjct: 279 ---------------VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPY 316
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 54/263 (20%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK-KSEMLKRGQVEHVRSERNLLAEV 163
+D +E +LIGKG+FG+V + E A+K +K K L + Q+E E L+ +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKH 110
Query: 164 DSRC---IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAE--SV 216
D+ IV L F + L L+ E L ++ LL + +S ++ R + + +
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA 169
Query: 217 LAIHSIHQHNYVHRDIKPDNLIL--DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
L + + + +H D+KP+N++L K +K+ DFG SS L
Sbjct: 170 LLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFG---------SSCQL--------- 211
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIM 334
GQ + Y + + Y +PEVLL Y + D WSLG I+
Sbjct: 212 ------GQRI-----------------YQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCIL 248
Query: 335 YEMLIGYPPFCSDDPRITCRKIV 357
EM G P F + KIV
Sbjct: 249 VEMHTGEPLFSGANEVDQMNKIV 271
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 107/264 (40%), Gaps = 45/264 (17%)
Query: 94 EYMRLQRRKIGIDDFEQLTL--IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVE 151
E + Q + ID+ L + +G+G F V L G +A+K++ E R E
Sbjct: 15 ENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDR---E 71
Query: 152 HVRSERNLLAEVDSRCIVQLF-YSFQDSDF---LYLIMEYLPGG----DIMTLLMREDIL 203
+ E ++ + I++L Y ++ +L++ + G +I L + + L
Sbjct: 72 EAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFL 131
Query: 204 SEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSI 263
+ED + + + +IH Y HRD+KP N++L G L D G
Sbjct: 132 TEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLG------------ 179
Query: 264 LLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGM 323
+NQ + EG LQ W R T+ Y APE+ + + +
Sbjct: 180 ------SMNQACI-HVEGS--RQALTLQDWAAQR--------CTISYRAPELFSVQSHCV 222
Query: 324 ---ECDWWSLGAIMYEMLIGYPPF 344
D WSLG ++Y M+ G P+
Sbjct: 223 IDERTDVWSLGCVLYAMMFGEGPY 246
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 106/259 (40%), Gaps = 56/259 (21%)
Query: 103 IGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+ + + + L IGKG FG+V L G A+K +K + +E +++ +
Sbjct: 9 LNMKELKLLQTIGKGEFGDVML--GDYRGNKVAVKCIKND-----ATAQAFLAEASVMTQ 61
Query: 163 VDSRCIVQLF-YSFQDSDFLYLIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAI 219
+ +VQL ++ LY++ EY+ G ++ L +L D + + A+
Sbjct: 62 LRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAM 121
Query: 220 HSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+ +N+VHRD+ N+++ ++ K+SDFGL K S
Sbjct: 122 EYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTK--------------------EASST 161
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML- 338
+ +P + + APE L + + + D WS G +++E+
Sbjct: 162 QDTGKLP---------------------VKWTAPEALREAAFSTKSDVWSFGILLWEIYS 200
Query: 339 IGYPPFCSDDPRITCRKIV 357
G P+ PRI + +V
Sbjct: 201 FGRVPY----PRIPLKDVV 215
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I+E++ G+++ L R+++ + V Y+A + A+ + + N++H
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLEKKNFIH 134
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 176 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 113/263 (42%), Gaps = 54/263 (20%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK-KSEMLKRGQVEHVRSERNLLAEV 163
+D +E +LIGKG+FG+V + E A+K +K K L + Q+E E L+ +
Sbjct: 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLE--LMNKH 110
Query: 164 DSRC---IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI--LSEDVARFYIAE--SV 216
D+ IV L F + L L+ E L ++ LL + +S ++ R + + +
Sbjct: 111 DTEMKYYIVHLKRHFMFRNHLCLVFEML-SYNLYDLLRNTNFRGVSLNLTRKFAQQMCTA 169
Query: 217 LAIHSIHQHNYVHRDIKPDNLIL--DKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
L + + + +H D+KP+N++L K +K+ DFG SS L
Sbjct: 170 LLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFG---------SSCQL--------- 211
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIM 334
GQ + Y + + Y +PEVLL Y + D WSLG I+
Sbjct: 212 ------GQRI-----------------YQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCIL 248
Query: 335 YEMLIGYPPFCSDDPRITCRKIV 357
EM G P F + KIV
Sbjct: 249 VEMHTGEPLFSGANEVDQMNKIV 271
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 57/245 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRS---ERNLLAEVDSRCIVQ 170
+G GA+G V + A+KKL + + H R E LL + ++
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQ----SLIHARRTYRELRLLKHLKHENVIG 83
Query: 171 LF------YSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ 224
L S +D +YL+ L G D+ ++ + LS++ +F + + + + IH
Sbjct: 84 LLDVFTPATSIEDFSEVYLVTT-LMGADLNNIV-KCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRD+KP N+ ++++ L++ DFGL + +++ +
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGY--------------------- 180
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPP 343
V T Y APE++L Y D WS+G IM E+L G
Sbjct: 181 --------------------VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKAL 220
Query: 344 FCSDD 348
F D
Sbjct: 221 FPGSD 225
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 103/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I+E++ G+++ L R+++ + V Y+A + A+ + + N++H
Sbjct: 77 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLEKKNFIH 134
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 176 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 96/237 (40%), Gaps = 53/237 (22%)
Query: 115 GKGAFGEVRLCRAKTTGEIFAMKKLKK-----SEMLKRGQVEHVRSERNLLAEVDSRCIV 169
G+G FG V + A+KKL +E LK + E + A+ +V
Sbjct: 31 GEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELK----QQFDQEIKVXAKCQHENLV 84
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED---ILSEDVARFYIAESVL-AIHSIHQH 225
+L D D L L+ Y P G ++ L D LS R IA+ I+ +H++
Sbjct: 85 ELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWH-XRCKIAQGAANGINFLHEN 143
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
+++HRDIK N++LD+ K+SDFGL +
Sbjct: 144 HHIHRDIKSANILLDEAFTAKISDFGLAR------------------------------- 172
Query: 286 PKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYP 342
E+ Q R VGT Y APE L+ + D +S G ++ E++ G P
Sbjct: 173 ASEKFAQXVXXSR-----IVGTTAYXAPEA-LRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I+E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 78 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTXTAHAGA-KFP--- 176
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 177 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 218
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G FGEV + ++ A+K +K M VE +E N++ + +V+L +
Sbjct: 190 LGAGQFGEVWMATYNKHTKV-AVKTMKPGSM----SVEAFLAEANVMKTLQHDKLVKL-H 243
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF--YIAESVLAIHSIHQHNYVHRD 231
+ + +Y+I E++ G ++ L ++ + + + + A+ + I Q NY+HRD
Sbjct: 244 AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRD 303
Query: 232 IKPDNLILDKNGHLKLSDFGLCK 254
++ N+++ + K++DFGL +
Sbjct: 304 LRAANILVSASLVCKIADFGLAR 326
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 98/236 (41%), Gaps = 54/236 (22%)
Query: 114 IGKGAFGEVRL-CRAKT---TGEIFAMKKLKK--SEMLKRGQVEHVRSERNLLAEVDSRC 167
+G+G FG+V L C T TGE+ A+K LK + G + + R L E
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEH---- 77
Query: 168 IVQLFYSFQDSD--FLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIH 223
I++ +D L L+MEY+P G + L R I + F I E + +HS H
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHSQH 137
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSI-LLEDEDIINQETVSEAEGQ 282
Y+HR++ N++LD + +K+ DFGL K + + + + ED D
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD------------- 181
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ + APE L + + D WS G +YE+L
Sbjct: 182 -----------------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEA-------------------- 203
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 204 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I+E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 82 VCTREPPFYIIIEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 180
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 181 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 77
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 78 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 135
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 136 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAPAGA-KFP--- 176
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 177 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 218
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 74/147 (50%), Gaps = 8/147 (5%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G GEV + ++ A+K LK+ M + +E NL+ ++ + +V+L Y
Sbjct: 21 LGAGQAGEVWMGYYNGHTKV-AVKSLKQGSM----SPDAFLAEANLMKQLQHQRLVRL-Y 74
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIHQHNYVHRD 231
+ + +Y+I EY+ G ++ L + + + A+ + I + NY+HRD
Sbjct: 75 AVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRD 134
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLED 258
++ N+++ K++DFGL + +ED
Sbjct: 135 LRAANILVSDTLSCKIADFGLARLIED 161
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ + V Y+A + A+ + + N++H
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLEKKNFIH 134
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 176 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 203
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 204 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 203
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 204 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 203
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 204 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ + V Y+A + A+ + + N++H
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLEKKNFIH 139
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 180
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 181 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 80
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQ----- 224
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 134
Query: 225 --HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 174
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 175 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAPAGA-KFP--- 177
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 178 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 97
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 151
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 152 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 191
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 192 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 232
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 107
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 161
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 162 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 201
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 202 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 242
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 102/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ + V Y+A + A+ + + N++H
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLEKKNFIH 134
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 176 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 203
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 204 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 101/240 (42%), Gaps = 59/240 (24%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVR----SERNLLAEVDSRCI 168
+IG G FGEV R K G+ + +K LK G E R SE +++ + + I
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKT---LKGGYTERQRREFLSEASIMGQFEHPNI 79
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIH----- 223
++L +S + ++ E++ G + + L D +F + + V + I
Sbjct: 80 IRLEGVVTNSMPVMILTEFMENGALDSFLRLND------GQFTVIQLVGMLRGIASGMRY 133
Query: 224 --QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ +YVHRD+ N++++ N K+SDFGL + LE+ S
Sbjct: 134 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSD------------------- 174
Query: 282 QWMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
P E S++G + + APE + + + D WS G +M+E++
Sbjct: 175 ----PTET-------------SSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 180
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 181 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 98/247 (39%), Gaps = 62/247 (25%)
Query: 114 IGKGAFGEVRLCRAKTTGE-----IFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCI 168
+G+GAFG+V L + A+K LK + R + + E LL + I
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAAR---KDFQREAELLTNLQHEHI 79
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILSEDVAR-----------FYIA 213
V+ + D D L ++ EY+ GD+ L IL + R +IA
Sbjct: 80 VKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIA 139
Query: 214 ESVLA--IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
+ + ++ QH +VHRD+ N ++ N +K+ DFG+ + D YS+
Sbjct: 140 SQIASGMVYLASQH-FVHRDLATRNCLVGANLLVKIGDFGMSR---DVYST--------- 186
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
G M+P + +M PE ++ + + E D WS G
Sbjct: 187 ---DYYRVGGHTMLP---------------------IRWMPPESIMYRKFTTESDVWSFG 222
Query: 332 AIMYEML 338
I++E+
Sbjct: 223 VILWEIF 229
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 107/252 (42%), Gaps = 59/252 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG----QVEHVRSERNLLAEVDSR-CI 168
+G GAFG+V A G+ A+ K+ +MLK + E + SE +++ + I
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVA-VKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA----IHSIHQ 224
V L + + +I EY GD++ L R+ + E F IA S L+ +H Q
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQ 172
Query: 225 ----------HNYVHRDIKPDNLILDKNGHL-KLSDFGLCKPLEDKYSSILLEDEDIINQ 273
N +HRD+ N++L NGH+ K+ DFGL + DI+N
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLAR--------------DIMND 217
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAI 333
+G +P + +MAPE + Y ++ D WS G +
Sbjct: 218 SNYI-VKGNARLP---------------------VKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 334 MYEML-IGYPPF 344
++E+ +G P+
Sbjct: 256 LWEIFSLGLNPY 267
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 177
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 178 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 180
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 181 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 81
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 82 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 139
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 140 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTXTAHAGA-KFP--- 180
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 181 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 222
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 78
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 79 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 136
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 137 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 177
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 178 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 219
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 89
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 90 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 147
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 148 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 188
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 189 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 230
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 176 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 124/312 (39%), Gaps = 74/312 (23%)
Query: 113 LIGKGAFGEVR-------LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
L+G+G++G+V+ LCR + K KK + G+ +V+ E LL +
Sbjct: 12 LLGEGSYGKVKEVLDSETLCR-----RAVKILKKKKLRRIPNGEA-NVKKEIQLLRRLRH 65
Query: 166 RCIVQL---FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-------YIAES 215
+ ++QL Y+ ++ +Y++MEY G M+E + S RF Y +
Sbjct: 66 KNVIQLVDVLYN-EEKQKMYMVMEYCVCG------MQEMLDSVPEKRFPVCQAHGYFCQL 118
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + +H VH+DIKP NL+L G LK+S G+ + L +D
Sbjct: 119 IDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP------FAADDTCR--- 169
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL--LKKGYGMECDWWSLGAI 333
++ G+ + PE+ L G + D WS G
Sbjct: 170 ---------------------------TSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVT 202
Query: 334 MYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFPEEPKISDEARDLICHLLCDVETRLGTR 393
+Y + G PF D+ I + P +SD + ++ + + R R
Sbjct: 203 LYNITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLSDLLKGMLEY---EPAKRFSIR 259
Query: 394 GVEELKEHPWFR 405
++++H WFR
Sbjct: 260 ---QIRQHSWFR 268
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEA-------------------- 203
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 204 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 54/236 (22%)
Query: 114 IGKGAFGEVRL-CRAKT---TGEIFAMKKLKK--SEMLKRGQVEHVRSERNLLAEVDSRC 167
+G+G FG+V L C T TGE+ A+K LK + G + + R L E
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEH---- 77
Query: 168 IVQLFYSFQDSD--FLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIH 223
I++ +D L L+MEY+P G + L R I + F I E + +H+ H
Sbjct: 78 IIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQH 137
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSI-LLEDEDIINQETVSEAEGQ 282
Y+HR++ N++LD + +K+ DFGL K + + + + ED D
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD------------- 181
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ + APE L + + D WS G +YE+L
Sbjct: 182 -----------------------SPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 80
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 81 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 138
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 139 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 179
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 180 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 221
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 102/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 283
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ + V Y+A + A+ + + N++H
Sbjct: 284 VCTREPPFYIITEFMTYGNLLDYLRECNRQEVSA--VVLLYMATQISSAMEYLEKKNFIH 341
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
R++ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 342 RNLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 382
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 383 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 424
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 76
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 77 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 134
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RD+ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 135 RDLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 175
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 176 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 217
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 54/236 (22%)
Query: 114 IGKGAFGEVRL-CRAKT---TGEIFAMKKLKKS--EMLKRGQVEHVRSERNLLAEVDSRC 167
+G+G FG+V L C T TGE+ A+K LK+ L+ G + R L E
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEH---- 71
Query: 168 IVQLFYSFQDSD--FLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIH 223
IV+ +D + L+MEY+P G + L R + + F I E + +H+ H
Sbjct: 72 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH 131
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSI-LLEDEDIINQETVSEAEGQ 282
Y+HR + N++LD + +K+ DFGL K + + + + ED D
Sbjct: 132 ---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD------------- 175
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ + APE L + + D WS G +YE+L
Sbjct: 176 -----------------------SPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 98/236 (41%), Gaps = 54/236 (22%)
Query: 114 IGKGAFGEVRL-CRAKT---TGEIFAMKKLKKS--EMLKRGQVEHVRSERNLLAEVDSRC 167
+G+G FG+V L C T TGE+ A+K LK+ L+ G + R L E
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEH---- 72
Query: 168 IVQLFYSFQDSD--FLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIH 223
IV+ +D + L+MEY+P G + L R + + F I E + +H+ H
Sbjct: 73 IVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLHAQH 132
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSI-LLEDEDIINQETVSEAEGQ 282
Y+HR + N++LD + +K+ DFGL K + + + + ED D
Sbjct: 133 ---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD------------- 176
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ + APE L + + D WS G +YE+L
Sbjct: 177 -----------------------SPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 53/237 (22%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVR----SERNLLAEVDSRCI 168
+IG G FGEV R K G+ + +K LK G E R SE +++ + + I
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKT---LKGGYTERQRREFLSEASIMGQFEHPNI 77
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIH----- 223
++L +S + ++ E++ G + + L D +F + + V + I
Sbjct: 78 IRLEGVVTNSMPVMILTEFMENGALDSFLRLND------GQFTVIQLVGMLRGIASGMRY 131
Query: 224 --QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ +YVHRD+ N++++ N K+SDFGL + LE+ S + S G
Sbjct: 132 LAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS----------DPTYTSSLGG 181
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ +P + + APE + + + D WS G +M+E++
Sbjct: 182 K--IP---------------------IRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 280
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 281 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 338
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
R++ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 339 RNLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 379
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 380 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 421
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 101/240 (42%), Gaps = 48/240 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G +GEV K A+K LK+ M +VE E ++ E+ +VQL
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM----EVEEFLKEAAVMKEIKHPNLVQLLG 322
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLM---REDILSEDVARFYIAESVL-AIHSIHQHNYVH 229
Y+I E++ G+++ L R+++ V Y+A + A+ + + N++H
Sbjct: 323 VCTREPPFYIITEFMTYGNLLDYLRECNRQEV--NAVVLLYMATQISSAMEYLEKKNFIH 380
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
R++ N ++ +N +K++DFGL + ++ +T + G P
Sbjct: 381 RNLAARNCLVGENHLVKVADFGLSR---------------LMTGDTYTAHAGA-KFP--- 421
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPFCSDD 348
+ + APE L + ++ D W+ G +++E+ G P+ D
Sbjct: 422 ------------------IKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID 463
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 101/243 (41%), Gaps = 50/243 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G+FG V RA+ G A+K L + + E +R E ++ + IV
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFLR-EVAIMKRLRHPNIVLFMG 101
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLL----MREDILSEDVARFYIAESVL-AIHSIHQHN-- 226
+ L ++ EYL G + LL RE + ++ R +A V ++ +H N
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL--DERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
VHR++K NL++DK +K+ DFGL + + S
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLS------------------------ 195
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
+ S GT ++MAPEVL + + D +S G I++E+ P+ +
Sbjct: 196 --------------SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241
Query: 347 DDP 349
+P
Sbjct: 242 LNP 244
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 40/244 (16%)
Query: 108 FEQLTLIGKGA--FGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+E LT+IGKG V L R K TGE ++++ E V ++ E ++ +
Sbjct: 11 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL-EACSNEMVTFLQGELHVSKLFNH 69
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVL-AIHSI 222
IV +F + L+++ ++ G L+ D ++E +A YI + VL A+ I
Sbjct: 70 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNE-LAIAYILQGVLKALDYI 128
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H YVHR +K ++++ +G + LS GL N +S + Q
Sbjct: 129 HHMGYVHRSVKASHILISVDGKVYLS--GLRS-----------------NLSMISHGQRQ 169
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK--KGYGMECDWWSLGAIMYEMLIG 340
R +V L +++PEVL + +GY + D +S+G E+ G
Sbjct: 170 ------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 217
Query: 341 YPPF 344
+ PF
Sbjct: 218 HVPF 221
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 93/233 (39%), Gaps = 47/233 (20%)
Query: 113 LIGKGAFGEVRLCRAKTTGE---IFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
+IG G FGEV R K G+ A+K LK K Q E +++ + D +V
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEK--QRRDFLCEASIMGQFDHPNVV 107
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA-IHSIHQHNYV 228
L + +++E++ G + L + D + + + A + + YV
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYV 167
Query: 229 HRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKE 288
HRD+ N++++ N K+SDFGL + +ED ++
Sbjct: 168 HRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAV------------------------- 202
Query: 289 RLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
Y+T G + + APE + + + D WS G +M+E++
Sbjct: 203 -------------YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVM 242
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 102/244 (41%), Gaps = 59/244 (24%)
Query: 114 IGKGAFGEVRLCRAKTTGE-----IFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCI 168
+G+GAFG+V L + A+K LK + R + E LL + I
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNAR---KDFHREAELLTNLQHEHI 77
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIM---------TLLMREDILSEDVAR---FYIAESV 216
V+ + + D L ++ EY+ GD+ +LM E ++ + +IA+ +
Sbjct: 78 VKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 217 LA--IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
A ++ QH +VHRD+ N ++ +N +K+ DFG+ + D YS+
Sbjct: 138 AAGMVYLASQH-FVHRDLATRNCLVGENLLVKIGDFGMSR---DVYST------------ 181
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIM 334
G M+P + +M PE ++ + + E D WSLG ++
Sbjct: 182 DYYRVGGHTMLP---------------------IRWMPPESIMYRKFTTESDVWSLGVVL 220
Query: 335 YEML 338
+E+
Sbjct: 221 WEIF 224
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 98/239 (41%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ EY+ G + + L + D A+F + + V + I
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
+VHRD+ N++++ N K+SDFGL + LED +
Sbjct: 164 SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 203
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 204 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 106/244 (43%), Gaps = 40/244 (16%)
Query: 108 FEQLTLIGKGA--FGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
+E LT+IGKG V L R K TGE ++++ E V ++ E ++ +
Sbjct: 27 YELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINL-EACSNEMVTFLQGELHVSKLFNH 85
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVL-AIHSI 222
IV +F + L+++ ++ G L+ D ++E +A YI + VL A+ I
Sbjct: 86 PNIVPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDGMNE-LAIAYILQGVLKALDYI 144
Query: 223 HQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
H YVHR +K ++++ +G + LS GL N +S + Q
Sbjct: 145 HHMGYVHRSVKASHILISVDGKVYLS--GLRS-----------------NLSMISHGQRQ 185
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK--KGYGMECDWWSLGAIMYEMLIG 340
R +V L +++PEVL + +GY + D +S+G E+ G
Sbjct: 186 ------------RVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANG 233
Query: 341 YPPF 344
+ PF
Sbjct: 234 HVPF 237
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 107/247 (43%), Gaps = 53/247 (21%)
Query: 112 TLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQL 171
T IG G+FG V + K G++ A+K LK + Q + R+E +L + I+ L
Sbjct: 42 TRIGSGSFGTV--YKGKWHGDV-AVKILKVVDPTPE-QFQAFRNEVAVLRKTRHVNIL-L 96
Query: 172 FYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE-----DVARFYIAESVLAIHSIHQHN 226
F + D L ++ ++ G + L ++ + D+AR ++ + +H N
Sbjct: 97 FMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIAR----QTAQGMDYLHAKN 152
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
+HRD+K +N+ L + +K+ DFGL + + +W
Sbjct: 153 IIHRDMKSNNIFLHEGLTVKIGDFGL------------------------ATVKSRWSGS 188
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG---YGMECDWWSLGAIMYEMLIGYPP 343
++ Q G++ +MAPEV+ + + + D +S G ++YE++ G P
Sbjct: 189 QQVEQ------------PTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
Query: 344 FCSDDPR 350
+ + R
Sbjct: 237 YSHINNR 243
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 106/254 (41%), Gaps = 40/254 (15%)
Query: 108 FEQLTLIGKGAFGEVRLC-RAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS- 165
+E + +G+GAFG+V C K G A+K +K + E RSE +L +++
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRY----CEAARSEIQVLEHLNTT 71
Query: 166 ------RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE--DVARFYIAESVL 217
RC VQ+ F+ + ++ E L G + L D R +
Sbjct: 72 DPNSTFRC-VQMLEWFEHHGHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICK 129
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDE-DIINQETV 276
+++ +H + H D+KP+N++ + SD+ + Y+ + DE +IN +
Sbjct: 130 SVNFLHSNKLTHTDLKPENILFVQ------SDY------TEAYNPKIKRDERTLINPDIK 177
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G E + V Y APEV+L G+ CD WS+G I+ E
Sbjct: 178 VVDFGSATYDDEHHS-----------TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIE 226
Query: 337 MLIGYPPFCSDDPR 350
+G+ F + D +
Sbjct: 227 YYLGFTVFPTHDSK 240
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 94/223 (42%), Gaps = 51/223 (22%)
Query: 139 LKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY--------------SFQDSDFLYLI 184
+KK + V+H E ++ +D IV++F S + + +Y++
Sbjct: 41 IKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIV 100
Query: 185 MEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-KNG 243
EY+ D+ +L + +L E AR ++ + + + IH N +HRD+KP NL ++ ++
Sbjct: 101 QEYMET-DLANVLEQGPLLEEH-ARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDL 158
Query: 244 HLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYS 303
LK+ DFGL + ++ YS ++ +SE + +W R+ R L
Sbjct: 159 VLKIGDFGLARIMDPHYS----------HKGHLSEG---------LVTKWYRSPRLL--- 196
Query: 304 TVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
L Y D W+ G I EML G F
Sbjct: 197 ------------LSPNNYTKAIDMWAAGCIFAEMLTGKTLFAG 227
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 105/244 (43%), Gaps = 52/244 (21%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
D L +G G FG V+ + + ++ A+K +K+ M + +E + NL E
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 80
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESVLAIHSIHQ 224
+VQL+ +++I EY+ G ++ L MR ++ + + A+ +
Sbjct: 81 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 138
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWM 284
++HRD+ N +++ G +K+SDFGL S +L+DE+
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGL--------SRYVLDDEET-------------- 176
Query: 285 MPKERLQQWKRNRRALAYSTVGT---LDYMAPEVLLKKGYGMECDWWSLGAIMYEML-IG 340
S+VG+ + + PEVL+ + + D W+ G +M+E+ +G
Sbjct: 177 ------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLG 218
Query: 341 YPPF 344
P+
Sbjct: 219 KMPY 222
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 109/276 (39%), Gaps = 87/276 (31%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
+G G+FG V +G+ FA+KK+ + K +++ ++ +L V+ +V FY
Sbjct: 15 LGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMK----VLDHVNIIKLVDYFY 70
Query: 174 SFQDSD-----------------------------------FLYLIMEYLPGGDIMTLLM 198
+ D + +L +IMEY+P D + ++
Sbjct: 71 TTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP--DTLHKVL 128
Query: 199 REDILSE-----DVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-KNGHLKLSDFGL 252
+ I S ++ YI + A+ IH HRDIKP NL+++ K+ LKL DFG
Sbjct: 129 KSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGS 188
Query: 253 CKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMA 312
K L +P E + + + + Y A
Sbjct: 189 AKKL----------------------------IPSEP-----------SVAXICSRFYRA 209
Query: 313 PEVLLKKG-YGMECDWWSLGAIMYEMLIGYPPFCSD 347
PE++L Y D WS+G + E+++G P F +
Sbjct: 210 PELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGE 245
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 101/243 (41%), Gaps = 50/243 (20%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G+FG V RA+ G A+K L + + E +R E ++ + IV
Sbjct: 45 IGAGSFGTVH--RAEWHGSDVAVKILMEQDFHAERVNEFLR-EVAIMKRLRHPNIVLFMG 101
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLL----MREDILSEDVARFYIAESVL-AIHSIHQHN-- 226
+ L ++ EYL G + LL RE + ++ R +A V ++ +H N
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQL--DERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
VHRD+K NL++DK +K+ DFGL + K S L
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSR---LKASXFL---------------------- 194
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCS 346
+ GT ++MAPEVL + + D +S G I++E+ P+ +
Sbjct: 195 -------------XSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGN 241
Query: 347 DDP 349
+P
Sbjct: 242 LNP 244
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 101/243 (41%), Gaps = 52/243 (21%)
Query: 109 EQLTLI---GKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
E L LI G G FGEV + ++ A+K LK M E E ++ ++
Sbjct: 9 ESLQLIKRLGNGQFGEVWMGTWNGNTKV-AIKTLKPGTM----SPESFLEEAQIMKKLKH 63
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFY--IAESVLAIHSIH 223
+VQL Y+ + +Y++ EY+ G ++ L + + + A+ + I
Sbjct: 64 DKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 122
Query: 224 QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQW 283
+ NY+HRD++ N+++ K++DFGL + +ED N+ T
Sbjct: 123 RMNYIHRDLRSANILVGNGLICKIADFGLARLIED-------------NEXTA------- 162
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML----I 339
R+ + + + APE L + ++ D WS G ++ E++ +
Sbjct: 163 -------------RQGAKFP----IKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRV 205
Query: 340 GYP 342
YP
Sbjct: 206 PYP 208
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 97/236 (41%), Gaps = 52/236 (22%)
Query: 113 LIGKGAFGEVRLCRAKTTG---EIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
+IG G FGEV KT+ E+ K K+ ++ +V+ + E ++ + I+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFL-GEAGIMGQFSHHNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIH------ 223
+L + +I EY+ G + L +D F + + V + I
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLREKD------GEFSVLQLVGMLRGIAAGMKYL 163
Query: 224 -QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
NYVHRD+ N++++ N K+SDFGL + LED + T + + G+
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD------------PEATYTTSGGK 211
Query: 283 WMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+P + + APE + + + D WS G +M+E++
Sbjct: 212 --IP---------------------IRWTAPEAISYRKFTSASDVWSFGIVMWEVM 244
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 106/252 (42%), Gaps = 59/252 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG----QVEHVRSERNLLAEVDSR-CI 168
+G GAFG+V A G+ A+ K+ +MLK + E + SE +++ + I
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVA-VKMLKSTAHADEKEALMSELKIMSHLGQHENI 112
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLA----IHSIHQ 224
V L + + +I EY GD++ L R+ + E F IA S + +H Q
Sbjct: 113 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 225 ----------HNYVHRDIKPDNLILDKNGHL-KLSDFGLCKPLEDKYSSILLEDEDIINQ 273
N +HRD+ N++L NGH+ K+ DFGL + DI+N
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLAR--------------DIMND 217
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAI 333
+G +P + +MAPE + Y ++ D WS G +
Sbjct: 218 SNYI-VKGNARLP---------------------VKWMAPESIFDCVYTVQSDVWSYGIL 255
Query: 334 MYEML-IGYPPF 344
++E+ +G P+
Sbjct: 256 LWEIFSLGLNPY 267
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 54/245 (22%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
D L +G G FG V+ + + ++ A+K +K+ M + +E + NL E
Sbjct: 9 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 64
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESVLAIHSIHQ 224
+VQL+ +++I EY+ G ++ L MR ++ + + A+ +
Sbjct: 65 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 122
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQW 283
++HRD+ N +++ G +K+SDFGL + L+D+Y+
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT---------------------- 160
Query: 284 MMPKERLQQWKRNRRALAYSTVGT---LDYMAPEVLLKKGYGMECDWWSLGAIMYEML-I 339
S+VG+ + + PEVL+ + + D W+ G +M+E+ +
Sbjct: 161 -------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 201
Query: 340 GYPPF 344
G P+
Sbjct: 202 GKMPY 206
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 79/158 (50%), Gaps = 13/158 (8%)
Query: 105 IDDFEQLT-LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER--NLLA 161
IDD++ + ++G G G+V K T E FA+K L+ +R H R+ + +++
Sbjct: 16 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 75
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLAI 219
VD + + Y+ + L ++ME L GG++ + + + +E A + AI
Sbjct: 76 IVD---VYENLYAGRKC--LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 130
Query: 220 HSIHQHNYVHRDIKPDNLILDK---NGHLKLSDFGLCK 254
+H N HRD+KP+NL+ N LKL+DFG K
Sbjct: 131 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 321 YGMECDWWSLGAIMYEMLIGYPPFCSD-----DPRITCRKIVNWKTCLKFPEEPKISDEA 375
Y CD WSLG IMY +L GYPPF S+ P + R I + PE ++S+E
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTR-IRMGQYEFPNPEWSEVSEEV 233
Query: 376 RDLICHLLCDVETRLGTRGVEELKEHPWF 404
+ LI +LL T+ T + E HPW
Sbjct: 234 KMLIRNLLKTEPTQRMT--ITEFMNHPWI 260
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 54/245 (22%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
D L +G G FG V+ + + ++ A+K +K+ M + +E + NL E
Sbjct: 25 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 80
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESVLAIHSIHQ 224
+VQL+ +++I EY+ G ++ L MR ++ + + A+ +
Sbjct: 81 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 138
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQW 283
++HRD+ N +++ G +K+SDFGL + L+D+Y+
Sbjct: 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT---------------------- 176
Query: 284 MMPKERLQQWKRNRRALAYSTVGT---LDYMAPEVLLKKGYGMECDWWSLGAIMYEML-I 339
S+VG+ + + PEVL+ + + D W+ G +M+E+ +
Sbjct: 177 -------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 217
Query: 340 GYPPF 344
G P+
Sbjct: 218 GKMPY 222
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 80
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ E + G + + L + D A+F + + V + I
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 134
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 135 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 174
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 175 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 215
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 54/245 (22%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
D L +G G FG V+ + + ++ A+K +K+ M + +E + NL E
Sbjct: 5 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 60
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESVLAIHSIHQ 224
+VQL+ +++I EY+ G ++ L MR ++ + + A+ +
Sbjct: 61 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 118
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQW 283
++HRD+ N +++ G +K+SDFGL + L+D+Y+
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT---------------------- 156
Query: 284 MMPKERLQQWKRNRRALAYSTVGT---LDYMAPEVLLKKGYGMECDWWSLGAIMYEML-I 339
S+VG+ + + PEVL+ + + D W+ G +M+E+ +
Sbjct: 157 -------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 197
Query: 340 GYPPF 344
G P+
Sbjct: 198 GKMPY 202
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 54/245 (22%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
D L +G G FG V+ + + ++ A+K +K+ M + +E + NL E
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 65
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESVLAIHSIHQ 224
+VQL+ +++I EY+ G ++ L MR ++ + + A+ +
Sbjct: 66 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 123
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQW 283
++HRD+ N +++ G +K+SDFGL + L+D+Y+
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT---------------------- 161
Query: 284 MMPKERLQQWKRNRRALAYSTVGT---LDYMAPEVLLKKGYGMECDWWSLGAIMYEML-I 339
S+VG+ + + PEVL+ + + D W+ G +M+E+ +
Sbjct: 162 -------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 202
Query: 340 GYPPF 344
G P+
Sbjct: 203 GKMPY 207
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 97/239 (40%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ E + G + + L + D A+F + + V + I
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
YVHRD+ N++++ N K+SDFGL + LED +
Sbjct: 164 SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 203
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 204 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%), Gaps = 54/245 (22%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
D L +G G FG V+ + + ++ A+K +K+ M + +E + NL E
Sbjct: 16 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 71
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESVLAIHSIHQ 224
+VQL+ +++I EY+ G ++ L MR ++ + + A+ +
Sbjct: 72 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 129
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQW 283
++HRD+ N +++ G +K+SDFGL + L+D+Y+
Sbjct: 130 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT---------------------- 167
Query: 284 MMPKERLQQWKRNRRALAYSTVGT---LDYMAPEVLLKKGYGMECDWWSLGAIMYEML-I 339
S+VG+ + + PEVL+ + + D W+ G +M+E+ +
Sbjct: 168 -------------------SSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSL 208
Query: 340 GYPPF 344
G P+
Sbjct: 209 GKMPY 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 128/318 (40%), Gaps = 65/318 (20%)
Query: 102 KIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK---KSEMLKRGQVEHVRSERN 158
++ DD E + +G+GA+G V R +G+I A+K+++ S+ KR + S R
Sbjct: 30 EVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRT 89
Query: 159 LLAEVDSRCIVQLFYS-FQDSDFLYLIMEYLPGG---DIMTLLMREDILSEDVARFYIAE 214
VD V + + F++ D +++ E ++ + + ED+
Sbjct: 90 ----VDCPFTVTFYGALFREGD-VWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVS 144
Query: 215 SVLAIHSIHQH-NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
V A+ +H + +HRD+KP N++++ G +K DFG+ L D + +DI
Sbjct: 145 IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVA------KDI--- 195
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEV----LLKKGYGMECDWWS 329
G Y APE L +KGY ++ D WS
Sbjct: 196 ------------------------------DAGCKPYXAPERINPELNQKGYSVKSDIWS 225
Query: 330 LGAIMYEMLIGYPPFCS-DDPRITCRKIVNWKTCLKFPEEP--KISDEARDLICHLLCDV 386
LG E+ I P+ S P +++V + P+ P K S E D L
Sbjct: 226 LGITXIELAILRFPYDSWGTPFQQLKQVVEEPS----PQLPADKFSAEFVDFTSQCLKKN 281
Query: 387 ETRLGTRGVEELKEHPWF 404
T EL +HP+F
Sbjct: 282 SKERPT--YPELXQHPFF 297
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 60/260 (23%)
Query: 106 DDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
DD+E Q+T+ IG G+FG V + K G++ A+K L + + Q++ ++E
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVG 72
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE-----DVARFYIA 213
+L + I+ LF + + L ++ ++ G + L + E D+AR
Sbjct: 73 VLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR---- 127
Query: 214 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
++ + +H + +HRD+K +N+ L ++ +K+ DFGL
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-------------------- 167
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG---YGMECDWWSL 330
K R W + + S G++ +MAPEV+ + Y + D ++
Sbjct: 168 -----------TEKSR---WSGSHQFEQLS--GSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 331 GAIMYEMLIGYPPFCSDDPR 350
G ++YE++ G P+ + + R
Sbjct: 212 GIVLYELMTGQLPYSNINNR 231
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 115/260 (44%), Gaps = 60/260 (23%)
Query: 106 DDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
DD+E Q+T+ IG G+FG V + K G++ A+K L + + Q++ ++E
Sbjct: 5 DDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVG 60
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE-----DVARFYIA 213
+L + I+ LF + L ++ ++ G + L + E D+AR
Sbjct: 61 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR---- 115
Query: 214 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
++ + +H + +HRD+K +N+ L ++ +K+ DFGL
Sbjct: 116 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-------------------- 155
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG---YGMECDWWSL 330
TV +W + + S G++ +MAPEV+ + Y + D ++
Sbjct: 156 -TVKS-------------RWSGSHQFEQLS--GSILWMAPEVIRMQDSNPYSFQSDVYAF 199
Query: 331 GAIMYEMLIGYPPFCSDDPR 350
G ++YE++ G P+ + + R
Sbjct: 200 GIVLYELMTGQLPYSNINNR 219
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 115/256 (44%), Gaps = 52/256 (20%)
Query: 106 DDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
DD+E Q+T+ IG G+FG V + K G++ A+K L + + Q++ ++E
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVG 56
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA-ESVL 217
+L + I+ LF + + L ++ ++ G + L + E + IA ++
Sbjct: 57 VLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+ +H + +HRD+K +N+ L ++ +K+ DFGL TV
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---------------------TVK 154
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGMECDWWSLGAIM 334
+W + + S G++ +MAPEV+ K Y + D ++ G ++
Sbjct: 155 S-------------RWSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 335 YEMLIGYPPFCSDDPR 350
YE++ G P+ + + R
Sbjct: 200 YELMTGQLPYSNINNR 215
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 52/266 (19%)
Query: 96 MRLQRRKIGIDDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG 148
M+ R+ DD+E Q+T+ IG G+FG V + K G++ A+K L + +
Sbjct: 18 MKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ- 73
Query: 149 QVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVA 208
Q++ ++E +L + I+ LF + L ++ ++ G + L + E +
Sbjct: 74 QLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 132
Query: 209 RFYIA-ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
IA ++ + +H + +HRD+K +N+ L ++ +K+ DFGL
Sbjct: 133 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------- 178
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGME 324
TV +W + + S G++ +MAPEV+ K Y +
Sbjct: 179 -------TVKS-------------RWSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQ 216
Query: 325 CDWWSLGAIMYEMLIGYPPFCSDDPR 350
D ++ G ++YE++ G P+ + + R
Sbjct: 217 SDVYAFGIVLYELMTGQLPYSNINNR 242
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 118/266 (44%), Gaps = 52/266 (19%)
Query: 96 MRLQRRKIGIDDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG 148
M+ R+ DD+E Q+T+ IG G+FG V + K G++ A+K L + +
Sbjct: 19 MKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ- 74
Query: 149 QVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVA 208
Q++ ++E +L + I+ LF + L ++ ++ G + L + E +
Sbjct: 75 QLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 133
Query: 209 RFYIA-ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
IA ++ + +H + +HRD+K +N+ L ++ +K+ DFGL
Sbjct: 134 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA-------------- 179
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGME 324
TV +W + + S G++ +MAPEV+ K Y +
Sbjct: 180 -------TVKS-------------RWSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQ 217
Query: 325 CDWWSLGAIMYEMLIGYPPFCSDDPR 350
D ++ G ++YE++ G P+ + + R
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNR 243
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 114/260 (43%), Gaps = 60/260 (23%)
Query: 106 DDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
DD+E Q+T+ IG G+FG V + K G++ A+K L + + Q++ ++E
Sbjct: 17 DDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVG 72
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSE-----DVARFYIA 213
+L + I+ LF + L ++ ++ G + L + E D+AR
Sbjct: 73 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIAR---- 127
Query: 214 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
++ + +H + +HRD+K +N+ L ++ +K+ DFGL
Sbjct: 128 QTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA-------------------- 167
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG---YGMECDWWSL 330
K R W + + S G++ +MAPEV+ + Y + D ++
Sbjct: 168 -----------TEKSR---WSGSHQFEQLS--GSILWMAPEVIRMQDSNPYSFQSDVYAF 211
Query: 331 GAIMYEMLIGYPPFCSDDPR 350
G ++YE++ G P+ + + R
Sbjct: 212 GIVLYELMTGQLPYSNINNR 231
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 103/242 (42%), Gaps = 48/242 (19%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
D L +G G FG V+ + + ++ A+K +K+ M + +E + NL E
Sbjct: 10 DLTFLKELGTGQFGVVKYGKWRGQYDV-AIKMIKEGSMSEDEFIEEAKVMMNLSHEK--- 65
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL--MREDILSEDVARFYIAESVLAIHSIHQ 224
+VQL+ +++I EY+ G ++ L MR ++ + + A+ +
Sbjct: 66 -LVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM-CKDVCEAMEYLES 123
Query: 225 HNYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQW 283
++HRD+ N +++ G +K+SDFGL + L+D+Y+S
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS--------------------- 162
Query: 284 MMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML-IGYP 342
+ + + + PEVL+ + + D W+ G +M+E+ +G
Sbjct: 163 -----------------SRGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKM 205
Query: 343 PF 344
P+
Sbjct: 206 PY 207
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 113/268 (42%), Gaps = 61/268 (22%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKL------KKSEMLK 146
+E+ + + + ++ E IGKG FG V R + A+K L ++EM++
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 147 RGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMT-LLMREDILSE 205
+ Q + E +++ ++ IV+L+ + ++ME++P GD+ LL + +
Sbjct: 66 KFQ--EFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 206 DVARFYIAESVLAIHSIHQHN--YVHRDIKPDNLI---LDKNGHL--KLSDFGLCKPLED 258
V + + L I + N VHRD++ N+ LD+N + K++DFGL
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGL------ 175
Query: 259 KYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL- 317
+Q++V G +G +MAPE +
Sbjct: 176 -------------SQQSVHSVSG----------------------LLGNFQWMAPETIGA 200
Query: 318 -KKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ Y + D +S I+Y +L G PF
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 52/266 (19%)
Query: 96 MRLQRRKIGIDDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG 148
M+ R+ DD+E Q+T+ IG G+FG V + K G++ A+K L + +
Sbjct: 11 MKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ- 66
Query: 149 QVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVA 208
Q++ ++E +L + I+ LF + L ++ ++ G + L + E +
Sbjct: 67 QLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 125
Query: 209 RFYIA-ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
IA ++ + +H + +HRD+K +N+ L ++ +K+ DFGL
Sbjct: 126 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT------------- 172
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGME 324
K R W + + S G++ +MAPEV+ K Y +
Sbjct: 173 ------------------EKSR---WSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQ 209
Query: 325 CDWWSLGAIMYEMLIGYPPFCSDDPR 350
D ++ G ++YE++ G P+ + + R
Sbjct: 210 SDVYAFGIVLYELMTGQLPYSNINNR 235
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 117/266 (43%), Gaps = 52/266 (19%)
Query: 96 MRLQRRKIGIDDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG 148
M+ R+ DD+E Q+T+ IG G+FG V + K G++ A+K L + +
Sbjct: 19 MKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ- 74
Query: 149 QVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVA 208
Q++ ++E +L + I+ LF + L ++ ++ G + L + E +
Sbjct: 75 QLQAFKNEVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIK 133
Query: 209 RFYIA-ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
IA ++ + +H + +HRD+K +N+ L ++ +K+ DFGL
Sbjct: 134 LIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT------------- 180
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGME 324
K R W + + S G++ +MAPEV+ K Y +
Sbjct: 181 ------------------EKSR---WSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQ 217
Query: 325 CDWWSLGAIMYEMLIGYPPFCSDDPR 350
D ++ G ++YE++ G P+ + + R
Sbjct: 218 SDVYAFGIVLYELMTGQLPYSNINNR 243
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 52/256 (20%)
Query: 106 DDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
DD+E Q+T+ IG G+FG V + K G++ A+K L + + Q++ ++E
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVG 61
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA-ESVL 217
+L + I+ LF + L ++ ++ G + L + E + IA ++
Sbjct: 62 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 120
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+ +H + +HRD+K +N+ L ++ +K+ DFGL TV
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---------------------TVK 159
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGMECDWWSLGAIM 334
+W + + S G++ +MAPEV+ K Y + D ++ G ++
Sbjct: 160 S-------------RWSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 335 YEMLIGYPPFCSDDPR 350
YE++ G P+ + + R
Sbjct: 205 YELMTGQLPYSNINNR 220
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 40/153 (26%)
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
A+ +H +HRD+KP N+ + +K+ DFGL ++ +DE+ ++TV
Sbjct: 176 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD--------QDEE---EQTVL 224
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYST----VGTLDYMAPEVLLKKGYGMECDWWSLGAI 333
MP AY+T VGT YM+PE + Y + D +SLG I
Sbjct: 225 TP-----MP--------------AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLI 265
Query: 334 MYEMLIGYPPFCSDDPRITCRKIVNWKTCLKFP 366
++E+L F + R+ +I+ LKFP
Sbjct: 266 LFELLYS---FSTQMERV---RIITDVRNLKFP 292
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 105 IDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK-KSEMLKRGQVEHVRSERNLLAEV 163
+ DFE + +G+G FG V + K +A+K+++ + L R E V E LA++
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR---EKVMREVKALAKL 61
Query: 164 DSRCIVQLFYSFQDS 178
+ IV+ F ++ ++
Sbjct: 62 EHPGIVRYFNAWLET 76
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 52/256 (20%)
Query: 106 DDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
DD+E Q+T+ IG G+FG V + K G++ A+K L + + Q++ ++E
Sbjct: 3 DDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVG 58
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA-ESVL 217
+L + I+ LF + L ++ ++ G + L + E + IA ++
Sbjct: 59 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 117
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+ +H + +HRD+K +N+ L ++ +K+ DFGL TV
Sbjct: 118 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---------------------TVK 156
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGMECDWWSLGAIM 334
+W + + S G++ +MAPEV+ K Y + D ++ G ++
Sbjct: 157 S-------------RWSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 201
Query: 335 YEMLIGYPPFCSDDPR 350
YE++ G P+ + + R
Sbjct: 202 YELMTGQLPYSNINNR 217
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 40/159 (25%)
Query: 181 LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD 240
LYL+ E + + + ++S ++++ +L +H +H+ VHRD+ P N++L
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 241 KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRAL 300
N + + DF L + ED + +W
Sbjct: 169 DNNDITICDFNLAR-------------EDTADANKTHYVTHRW----------------- 198
Query: 301 AYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
Y APE++++ KG+ D WS G +M EM
Sbjct: 199 ---------YRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 40/159 (25%)
Query: 181 LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD 240
LYL+ E + + + ++S ++++ +L +H +H+ VHRD+ P N++L
Sbjct: 109 LYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 241 KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRAL 300
N + + DF L + ED + +W
Sbjct: 169 DNNDITICDFNLAR-------------EDTADANKTHYVTHRW----------------- 198
Query: 301 AYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEML 338
Y APE++++ KG+ D WS G +M EM
Sbjct: 199 ---------YRAPELVMQFKGFTKLVDMWSAGCVMAEMF 228
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 52/256 (20%)
Query: 106 DDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
DD+E Q+T+ IG G+FG V + K G++ A+K L + + Q++ ++E
Sbjct: 6 DDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVG 61
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA-ESVL 217
+L + I+ LF + L ++ ++ G + L + E + IA ++
Sbjct: 62 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 120
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+ +H + +HRD+K +N+ L ++ +K+ DFGL TV
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---------------------TVK 159
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGMECDWWSLGAIM 334
+W + + S G++ +MAPEV+ K Y + D ++ G ++
Sbjct: 160 S-------------RWSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 335 YEMLIGYPPFCSDDPR 350
YE++ G P+ + + R
Sbjct: 205 YELMTGQLPYSNINNR 220
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 52/256 (20%)
Query: 106 DDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
DD+E Q+T+ IG G+FG V + K G++ A+K L + + Q++ ++E
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTVY--KGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVG 56
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA-ESVL 217
+L + I+ LF + L ++ ++ G + L + E + IA ++
Sbjct: 57 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+ +H + +HRD+K +N+ L ++ +K+ DFGL TV
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA---------------------TVK 154
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGMECDWWSLGAIM 334
+W + + S G++ +MAPEV+ K Y + D ++ G ++
Sbjct: 155 S-------------RWSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 335 YEMLIGYPPFCSDDPR 350
YE++ G P+ + + R
Sbjct: 200 YELMTGQLPYSNINNR 215
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 66/167 (39%), Gaps = 37/167 (22%)
Query: 181 LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD 240
LY+ + G D+ L R+ L+ A + + A+ + H HRD+KP+N+++
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS 168
Query: 241 KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRAL 300
+ L DFG+ D E+L Q
Sbjct: 169 ADDFAYLVDFGIASATTD-----------------------------EKLTQLG------ 193
Query: 301 AYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIGYPPFCSD 347
+TVGTL Y APE + D ++L ++YE L G PP+ D
Sbjct: 194 --NTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 113/256 (44%), Gaps = 52/256 (20%)
Query: 106 DDFE----QLTL---IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN 158
DD+E Q+T+ IG G+FG V + K G++ A+K L + + Q++ ++E
Sbjct: 1 DDWEIPDGQITVGQRIGSGSFGTV--YKGKWHGDV-AVKMLNVTAPTPQ-QLQAFKNEVG 56
Query: 159 LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIA-ESVL 217
+L + I+ LF + L ++ ++ G + L + E + IA ++
Sbjct: 57 VLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+ +H + +HRD+K +N+ L ++ +K+ DFGL
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLAT----------------------- 152
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL---KKGYGMECDWWSLGAIM 334
K R W + + S G++ +MAPEV+ K Y + D ++ G ++
Sbjct: 153 --------EKSR---WSGSHQFEQLS--GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 335 YEMLIGYPPFCSDDPR 350
YE++ G P+ + + R
Sbjct: 200 YELMTGQLPYSNINNR 215
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 30/153 (19%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
+F +L IG G FG V C + G I+A+K+ KK G V+ E+N L EV +
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVD----EQNALREVYAH 62
Query: 167 C-------IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVL- 217
+V+ F ++ + D + + EY GG + D +SE+ Y E+ L
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA------DAISENYRIMSYFKEAELK 116
Query: 218 --------AIHSIHQHNYVHRDIKPDNLILDKN 242
+ IH + VH DIKP N+ + +
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT 149
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 30/153 (19%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
+F +L IG G FG V C + G I+A+K+ KK G V+ E+N L EV +
Sbjct: 12 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVD----EQNALREVYAH 64
Query: 167 C-------IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVL- 217
+V+ F ++ + D + + EY GG + D +SE+ Y E+ L
Sbjct: 65 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA------DAISENYRIMSYFKEAELK 118
Query: 218 --------AIHSIHQHNYVHRDIKPDNLILDKN 242
+ IH + VH DIKP N+ + +
Sbjct: 119 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT 151
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 30/153 (19%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
+F +L IG G FG V C + G I+A+K+ KK G V+ E+N L EV +
Sbjct: 10 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVD----EQNALREVYAH 62
Query: 167 C-------IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVL- 217
+V+ F ++ + D + + EY GG + D +SE+ Y E+ L
Sbjct: 63 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA------DAISENYRIMSYFKEAELK 116
Query: 218 --------AIHSIHQHNYVHRDIKPDNLILDKN 242
+ IH + VH DIKP N+ + +
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT 149
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 69/153 (45%), Gaps = 30/153 (19%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
+F +L IG G FG V C + G I+A+K+ KK G V+ E+N L EV +
Sbjct: 8 EFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKP---LAGSVD----EQNALREVYAH 60
Query: 167 C-------IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF-YIAESVL- 217
+V+ F ++ + D + + EY GG + D +SE+ Y E+ L
Sbjct: 61 AVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLA------DAISENYRIMSYFKEAELK 114
Query: 218 --------AIHSIHQHNYVHRDIKPDNLILDKN 242
+ IH + VH DIKP N+ + +
Sbjct: 115 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT 147
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/256 (21%), Positives = 111/256 (43%), Gaps = 57/256 (22%)
Query: 95 YMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVR 154
+M L+R +I + L +G G FG V+L + K ++ A+K +K+ M + +
Sbjct: 2 HMELKREEITL-----LKELGSGQFGVVKLGKWKGQYDV-AVKMIKEGSMSE----DEFF 51
Query: 155 SERNLLAEVDSRCIVQLFYSFQDSDF-LYLIMEYLPGGDIMTLLMREDILSEDVARFYIA 213
E + ++ +V+ FY ++ +Y++ EY+ G ++ L E +
Sbjct: 52 QEAQTMMKLSHPKLVK-FYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMC 110
Query: 214 ESVL-AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
V + + H ++HRD+ N ++D++ +K+SDFG+ + +L+D+ +
Sbjct: 111 YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTR--------YVLDDQYV-- 160
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGT---LDYMAPEVLLKKGYGMECDWWS 329
S+VGT + + APEV Y + D W+
Sbjct: 161 ------------------------------SSVGTKFPVKWSAPEVFHYFKYSSKSDVWA 190
Query: 330 LGAIMYEML-IGYPPF 344
G +M+E+ +G P+
Sbjct: 191 FGILMWEVFSLGKMPY 206
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 74
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 75 VDNPHVCRLL-GICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 179
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 180 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 341 YPPF 344
P+
Sbjct: 218 SKPY 221
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 96/239 (40%), Gaps = 59/239 (24%)
Query: 113 LIGKGAFGEVRLCRAK--TTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G G FGEV R K + EI A+K LK K Q E +++ + D I+
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEK--QRRDFLGEASIMGQFDHPNII 109
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQH---- 225
+L S + ++ E + G + + L + D A+F + + V + I
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQLVGMLRGIASGMKYL 163
Query: 226 ---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQ 282
VHRD+ N++++ N K+SDFGL + LED +
Sbjct: 164 SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-------------------- 203
Query: 283 WMMPKERLQQWKRNRRALAYSTVG---TLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
AY+T G + + +PE + + + D WS G +++E++
Sbjct: 204 ------------------AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVM 244
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 65/248 (26%)
Query: 114 IGKGAFGEVRLCRAKTT-----GEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCI 168
+G+GAFG+V L + A+K LK++ R + + E LL + + I
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLTMLQHQHI 105
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILS--EDVA------------RF 210
V+ F + L ++ EY+ GD+ L +L+ EDVA
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 211 YIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDI 270
+A ++ + +H +VHRD+ N ++ + +K+ DFG+ + D YS+
Sbjct: 166 QVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSR---DIYST-------- 211
Query: 271 INQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSL 330
G+ M+P + +M PE +L + + E D WS
Sbjct: 212 ----DYYRVGGRTMLP---------------------IRWMPPESILYRKFTTESDVWSF 246
Query: 331 GAIMYEML 338
G +++E+
Sbjct: 247 GVVLWEIF 254
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 65/248 (26%)
Query: 114 IGKGAFGEVRLCRAKTT-----GEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCI 168
+G+GAFG+V L + A+K LK++ R + + E LL + + I
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLTMLQHQHI 76
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILS--EDVA------------RF 210
V+ F + L ++ EY+ GD+ L +L+ EDVA
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 211 YIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDI 270
+A ++ + +H +VHRD+ N ++ + +K+ DFG+ + D YS+
Sbjct: 137 QVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSR---DIYST-------- 182
Query: 271 INQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSL 330
G+ M+P + +M PE +L + + E D WS
Sbjct: 183 ----DYYRVGGRTMLP---------------------IRWMPPESILYRKFTTESDVWSF 217
Query: 331 GAIMYEML 338
G +++E+
Sbjct: 218 GVVLWEIF 225
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 101/248 (40%), Gaps = 65/248 (26%)
Query: 114 IGKGAFGEVRLCRAKTT-----GEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCI 168
+G+GAFG+V L + A+K LK++ R + + E LL + + I
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESAR---QDFQREAELLTMLQHQHI 82
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILS--EDVA------------RF 210
V+ F + L ++ EY+ GD+ L +L+ EDVA
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 211 YIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDI 270
+A ++ + +H +VHRD+ N ++ + +K+ DFG+ + D YS+
Sbjct: 143 QVAAGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSR---DIYST-------- 188
Query: 271 INQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSL 330
G+ M+P + +M PE +L + + E D WS
Sbjct: 189 ----DYYRVGGRTMLP---------------------IRWMPPESILYRKFTTESDVWSF 223
Query: 331 GAIMYEML 338
G +++E+
Sbjct: 224 GVVLWEIF 231
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 61/268 (22%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKL------KKSEMLK 146
+E+ + + + ++ E IGKG FG V R + A+K L ++EM++
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 147 RGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMT-LLMREDILSE 205
+ Q + E +++ ++ IV+L+ + ++ME++P GD+ LL + +
Sbjct: 66 KFQ--EFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 206 DVARFYIAESVLAIHSIHQHN--YVHRDIKPDNLI---LDKNGHL--KLSDFGLCKPLED 258
V + + L I + N VHRD++ N+ LD+N + K++DFG
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG------- 174
Query: 259 KYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL- 317
+Q++V G +G +MAPE +
Sbjct: 175 ------------TSQQSVHSVSG----------------------LLGNFQWMAPETIGA 200
Query: 318 -KKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ Y + D +S I+Y +L G PF
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 100/253 (39%), Gaps = 52/253 (20%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
++F+ LIG G FG+V + ++ ++ +S +G E L S
Sbjct: 39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS---QGIEEFETEIETL-----S 90
Query: 166 RC----IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVA---RFYIA-ESVL 217
C +V L + + + LI +Y+ G++ L D+ + ++ R I +
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+H +H +HRD+K N++LD+N K++DFG+ K
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK----------------------- 187
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
+ + ++ L GTL Y+ PE +K + D +S G +++E+
Sbjct: 188 -------------KGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 338 LIGYPPFCSDDPR 350
L PR
Sbjct: 235 LCARSAIVQSLPR 247
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 103/257 (40%), Gaps = 67/257 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV-------DSR 166
+G GAFG+V A G+ A+ K+ +MLK H + L++E+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVA-VKMLK--STAHADEKEALMSELKIMSHLGQHE 110
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR-----------------EDILSEDVAR 209
IV L + + +I EY GD++ L R E + S D+
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLH 170
Query: 210 FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHL-KLSDFGLCKPLEDKYSSILLEDE 268
F ++ + + N +HRD+ N++L NGH+ K+ DFGL +
Sbjct: 171 F-SSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLAR-------------- 214
Query: 269 DIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWW 328
DI+N +G +P + +MAPE + Y ++ D W
Sbjct: 215 DIMNDSNYI-VKGNARLP---------------------VKWMAPESIFDCVYTVQSDVW 252
Query: 329 SLGAIMYEML-IGYPPF 344
S G +++E+ +G P+
Sbjct: 253 SYGILLWEIFSLGLNPY 269
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 101/261 (38%), Gaps = 65/261 (24%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAK--TTGEIFAMKKLK--KSEMLKRGQVEHVRSERNLLA 161
++ E + IG+GAFG V RA E F M +K K E Q + R E L+A
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQR-EAALMA 105
Query: 162 EVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLL-----------------MREDILS 204
E D+ IV+L + L+ EY+ GD+ L R + S
Sbjct: 106 EFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 205 EDVARFYIAESVL-------AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLE 257
AE + + + + +VHRD+ N ++ +N +K++DFGL +
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSR--- 222
Query: 258 DKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL 317
+ YS+ +A+G +P + +M PE +
Sbjct: 223 NIYSA------------DYYKADGNDAIP---------------------IRWMPPESIF 249
Query: 318 KKGYGMECDWWSLGAIMYEML 338
Y E D W+ G +++E+
Sbjct: 250 YNRYTTESDVWAYGVVLWEIF 270
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 17 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 74
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 75 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 179
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 180 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 217
Query: 341 YPPF 344
P+
Sbjct: 218 SKPY 221
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 103/250 (41%), Gaps = 59/250 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEV-------DSR 166
+G GAFG+V A G+ A+ K+ +MLK H + L++E+
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVA-VKMLK--STAHADEKEALMSELKIMSHLGQHE 110
Query: 167 CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRE---DILSEDVARF-------YIAESV 216
IV L + + +I EY GD++ L R+ D+ ED + ++
Sbjct: 111 NIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVA 170
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHL-KLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + N +HRD+ N++L NGH+ K+ DFGL + DI+N
Sbjct: 171 QGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLAR--------------DIMNDSN 215
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
+G +P + +MAPE + Y ++ D WS G +++
Sbjct: 216 YI-VKGNARLP---------------------VKWMAPESIFDCVYTVQSDVWSYGILLW 253
Query: 336 EML-IGYPPF 344
E+ +G P+
Sbjct: 254 EIFSLGLNPY 263
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 77
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 78 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 182
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 183 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 341 YPPF 344
P+
Sbjct: 221 SKPY 224
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAK-TTGEIFAMKKLKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + K+ K+E + + +E
Sbjct: 365 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 420
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 421 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 479
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 480 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENYYKAQT- 530
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 531 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 564
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 565 AFSYGQKPY 573
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 76 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 180
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 181 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 341 YPPF 344
P+
Sbjct: 219 SKPY 222
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAK-TTGEIFAMKKLKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + K+ K+E + + +E
Sbjct: 366 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 421
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 422 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 480
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 481 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENYYKAQT- 531
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 532 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 565
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 566 AFSYGQKPY 574
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 181
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 182 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 341 YPPF 344
P+
Sbjct: 220 SKPY 223
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 112/268 (41%), Gaps = 61/268 (22%)
Query: 93 TEYMRLQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKL------KKSEMLK 146
+E+ + + + ++ E IGKG FG V R + A+K L ++EM++
Sbjct: 6 SEFPKSRLPTLADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIE 65
Query: 147 RGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMT-LLMREDILSE 205
+ Q + E +++ ++ IV+L+ + ++ME++P GD+ LL + +
Sbjct: 66 KFQ--EFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVMEFVPCGDLYHRLLDKAHPIKW 121
Query: 206 DVARFYIAESVLAIHSIHQHN--YVHRDIKPDNLI---LDKNGHL--KLSDFGLCKPLED 258
V + + L I + N VHRD++ N+ LD+N + K++DF L
Sbjct: 122 SVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSL------ 175
Query: 259 KYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLL- 317
+Q++V G +G +MAPE +
Sbjct: 176 -------------SQQSVHSVSG----------------------LLGNFQWMAPETIGA 200
Query: 318 -KKGYGMECDWWSLGAIMYEMLIGYPPF 344
++ Y + D +S I+Y +L G PF
Sbjct: 201 EEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 99/253 (39%), Gaps = 52/253 (20%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS 165
++F+ LIG G FG+V + ++ ++ +S +G E L S
Sbjct: 39 NNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESS---QGIEEFETEIETL-----S 90
Query: 166 RC----IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVA---RFYIA-ESVL 217
C +V L + + + LI +Y+ G++ L D+ + ++ R I +
Sbjct: 91 FCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAAR 150
Query: 218 AIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+H +H +HRD+K N++LD+N K++DFG+ K
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK----------------------- 187
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
+ + + L GTL Y+ PE +K + D +S G +++E+
Sbjct: 188 -------------KGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEV 234
Query: 338 LIGYPPFCSDDPR 350
L PR
Sbjct: 235 LCARSAIVQSLPR 247
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 103/244 (42%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 179 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 341 YPPF 344
P+
Sbjct: 217 SKPY 220
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 105/248 (42%), Gaps = 55/248 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG----QVEHVRSERNLLAEVDSR-CI 168
+G GAFG+V A G+ A+ K+ +MLK + E + SE +++ + I
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVA-VKMLKSTAHADEKEALMSELKIMSHLGQHENI 104
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRE---DILSEDVARF-------YIAESVLA 218
V L + + +I EY GD++ L R+ D+ ED + ++
Sbjct: 105 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQG 164
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHL-KLSDFGLCKPLEDKYSSILLEDEDIINQETVS 277
+ + N +HRD+ N++L NGH+ K+ DFGL + DI+N
Sbjct: 165 MAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLAR--------------DIMNDSNYI 209
Query: 278 EAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEM 337
+G +P + +MAPE + Y ++ D WS G +++E+
Sbjct: 210 -VKGNARLP---------------------VKWMAPESIFDCVYTVQSDVWSYGILLWEI 247
Query: 338 L-IGYPPF 344
+G P+
Sbjct: 248 FSLGLNPY 255
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 129/351 (36%), Gaps = 109/351 (31%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLK--KSEMLKR--GQVEHVRSERNLLA 161
DD++ + +G+G + EV T E +K LK K +KR +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIIT 96
Query: 162 EVD------SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
D SR +F ++DF L + L DI RFY+ E
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQL-YQTLTDYDI---------------RFYMYEI 140
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILD-KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
+ A+ H +HRD+KP N+++D ++ L+L D+GL
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA--------------------- 179
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAI 333
++ P + V + + PE+L+ + Y D WSLG +
Sbjct: 180 -------EFYHPGQEYN-----------VRVASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 334 MYEMLIGYPPFCSD------------------------------DPRIT------CRKIV 357
+ M+ PF DPR RK
Sbjct: 222 LASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK-- 279
Query: 358 NWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFRGI 407
W+ + + +S EA D + LL D ++RL R E EHP+F +
Sbjct: 280 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR---EAMEHPYFYTV 327
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAK-TTGEIFAMKKLKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + K+ K+E + + +E
Sbjct: 23 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 78
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 79 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 137
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 138 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENYYKAQT- 188
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 189 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 223 AFSYGQKPY 231
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAK-TTGEIFAMKKLKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + K+ K+E + + +E
Sbjct: 23 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 78
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 79 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 137
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 138 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENYYKAQT- 188
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 189 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 222
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 223 AFSYGQKPY 231
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 99/260 (38%), Gaps = 80/260 (30%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCI----- 168
+G G FG V LC+ + +A+K ++ + R + E ++L ++ + I
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRS----AKIEADILKKIQNDDINNNNI 98
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED---ILSEDVARFYIAESVLAIHSIHQH 225
V+ F D + LI E L G + ++ R + ED+ + Y E + A++ + +
Sbjct: 99 VKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDI-KLYCIEILKALNYLRKM 156
Query: 226 NYVHRDIKPDNLILD-------------------------KNGHLKLSDFGLCKPLEDKY 260
+ H D+KP+N++LD K+ +KL DFG C + Y
Sbjct: 157 SLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG-CATFKSDY 215
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG 320
S + T Y APEV+L G
Sbjct: 216 HG----------------------------------------SIINTRQYRAPEVILNLG 235
Query: 321 YGMECDWWSLGAIMYEMLIG 340
+ + D WS G ++ E+ G
Sbjct: 236 WDVSSDMWSFGCVLAELYTG 255
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAK-TTGEIFAMKKLKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + K+ K+E + + +E
Sbjct: 21 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 76
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 77 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 135
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 136 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENYYKAQT- 186
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 187 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 220
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 221 AFSYGQKPY 229
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 108/252 (42%), Gaps = 60/252 (23%)
Query: 113 LIGKGAFGEV-----------RL-CRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLL 160
+IGKG FG V R+ C K+ I M++++ L+ G + + N+L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEA--FLREGLLMRGLNHPNVL 85
Query: 161 AEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM--REDILSEDVARFYIAESVLA 218
A + ++++ Y+ GD++ + + + +D+ F + +
Sbjct: 86 ALIG--------IMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGL-QVARG 136
Query: 219 IHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSE 278
+ + + +VHRD+ N +LD++ +K++DFGL + DI+++E S
Sbjct: 137 MEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLAR--------------DILDREYYS- 181
Query: 279 AEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+QQ + R + ++ + E L + + D WS G +++E+L
Sbjct: 182 -----------VQQHRHARLPVKWTAL--------ESLQTYRFTTKSDVWSFGVLLWELL 222
Query: 339 I-GYPPFCSDDP 349
G PP+ DP
Sbjct: 223 TRGAPPYRHIDP 234
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 104/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKK-LKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + + + + K+E + + +E
Sbjct: 13 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 68
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 69 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 127
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 128 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENYYKAQT- 178
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 179 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 212
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 213 AFSYGQKPY 221
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/249 (21%), Positives = 103/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAK-TTGEIFAMKKLKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + K+ K+E + + +E
Sbjct: 7 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 62
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 63 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 121
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 122 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENYYKAQT- 172
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 173 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 207 AFSYGQKPY 215
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 104/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKK-LKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + + + + K+E + + +E
Sbjct: 7 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 62
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 63 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 121
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 122 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENXYKAQT- 172
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 173 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 206
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 207 AFSYGQKPY 215
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 104/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKK-LKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + + + + K+E + + +E
Sbjct: 1 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 56
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 57 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 115
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 116 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENYYKAQT- 166
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 167 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 200
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 201 AFSYGQKPY 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 103 IGIDDFEQLTLIGKGAFGEVR-----LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
IG D L +G G+FG VR KT A+K LK + + ++ E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 66
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED--ILSEDVARFYIAES 215
N + +D R +++L Y + + ++ E P G ++ L + L ++R Y +
Sbjct: 67 NAMHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQV 124
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + ++HRD+ NL+L +K+ DFGL + L D+ + QE
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-------DDHYVMQE- 176
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
R + ++ + APE L + + D W G ++
Sbjct: 177 ---------------------HRKVPFA------WCAPESLKTRTFSHASDTWMFGVTLW 209
Query: 336 EML 338
EM
Sbjct: 210 EMF 212
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
L+ ++ D+F ++G+G FG+V R G + A+K+LK+ E + G+++ ++E
Sbjct: 30 LRELQVASDNFSNKNILGRGGFGKVYKGRL-ADGTLVAVKRLKE-ERXQGGELQ-FQTEV 86
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV----ARFYIA 213
+++ R +++L L+ Y+ G + + L RE S+ R IA
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPESQPPLDWPKRQRIA 145
Query: 214 -ESVLAIHSIHQH---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDED 269
S + +H H +HRD+K N++LD+ + DFGL K ++ K +
Sbjct: 146 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHV------ 199
Query: 270 IINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWS 329
+ GT+ ++APE L + D +
Sbjct: 200 -------------------------------XXAVRGTIGHIAPEYLSTGKSSEKTDVFG 228
Query: 330 LGAIMYEMLIGYPPF 344
G ++ E++ G F
Sbjct: 229 YGVMLLELITGQRAF 243
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 104/249 (41%), Gaps = 42/249 (16%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKK-LKKSEMLKRGQVEHVRSE 156
L R+ + ++D E +G G FG V+ + + + + K+E + + +E
Sbjct: 3 LDRKLLTLEDKE----LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAE 58
Query: 157 RNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESV 216
N++ ++D+ IV++ +++ L+ME G + L + + + + +
Sbjct: 59 ANVMQQLDNPYIVRMI-GICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 117
Query: 217 LAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETV 276
+ + + + N+VHRD+ N++L + K+SDFGL K L DE+ +T
Sbjct: 118 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALR--------ADENYYKAQT- 168
Query: 277 SEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE 336
G+W + + APE + + + D WS G +M+E
Sbjct: 169 ---HGKW-----------------------PVKWYAPECINYYKFSSKSDVWSFGVLMWE 202
Query: 337 ML-IGYPPF 344
G P+
Sbjct: 203 AFSYGQKPY 211
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 56/250 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 35 LGRGAFGQVIEADAFGIDKT-ATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 169 VQLFYS-FQDSDFLYLIMEYLPGGDIMTLL------------MREDILSEDVARFYIAES 215
V L + + L +I+E+ G++ T L + +D L+ + Y +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + +HRD+ N++L + +K+ DFGL + D Y +D D + +
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLAR---DIY-----KDPDYVRK-- 203
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
G +P L +MAPE + + Y ++ D WS G +++
Sbjct: 204 -----GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 336 EML-IGYPPF 344
E+ +G P+
Sbjct: 238 EIFSLGASPY 247
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 103 IGIDDFEQLTLIGKGAFGEVR-----LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
IG D L +G G+FG VR KT A+K LK + + ++ E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 72
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED--ILSEDVARFYIAES 215
N + +D R +++L Y + + ++ E P G ++ L + L ++R Y +
Sbjct: 73 NAMHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQV 130
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + ++HRD+ NL+L +K+ DFGL + L D+ + QE
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-------DDHXVMQE- 182
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
R + ++ + APE L + + D W G ++
Sbjct: 183 ---------------------HRKVPFA------WCAPESLKTRTFSHASDTWMFGVTLW 215
Query: 336 EML 338
EM
Sbjct: 216 EMF 218
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 103 IGIDDFEQLTLIGKGAFGEVR-----LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
IG D L +G G+FG VR KT A+K LK + + ++ E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 62
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED--ILSEDVARFYIAES 215
N + +D R +++L Y + + ++ E P G ++ L + L ++R Y +
Sbjct: 63 NAMHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQV 120
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + ++HRD+ NL+L +K+ DFGL + L D+ + QE
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-------DDHXVMQE- 172
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
R + ++ + APE L + + D W G ++
Sbjct: 173 ---------------------HRKVPFA------WCAPESLKTRTFSHASDTWMFGVTLW 205
Query: 336 EML 338
EM
Sbjct: 206 EMF 208
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 120/304 (39%), Gaps = 76/304 (25%)
Query: 79 EEQEEMLRNLERRETEYMRLQRRKIGID--------DFEQLTLIGKGAFGEVRLCRA--- 127
E Q +M++ + EY + R+ D + E ++G GAFG+V A
Sbjct: 10 ESQLQMVQVTGSSDNEYFYVDFREYEYDLKWEFPRENLEFGKVLGSGAFGKVMNATAYGI 69
Query: 128 -KTTGEI-FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR-CIVQLFYSFQDSDFLYLI 184
KT I A+K LK E + E + SE ++ ++ S IV L + S +YLI
Sbjct: 70 SKTGVSIQVAVKMLK--EKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLI 127
Query: 185 MEYLPGGDIMTLL-MREDILSEDVARF----------------------YIAESVLAIHS 221
EY GD++ L + + SED + + + +
Sbjct: 128 FEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEF 187
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ + VHRD+ N+++ +K+ DFGL + ++ D + + G
Sbjct: 188 LEFKSCVHRDLAARNVLVTHGKVVKICDFGLARD--------IMSDSNYV-------VRG 232
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML-IG 340
+P + +MAPE L + Y ++ D WS G +++E+ +G
Sbjct: 233 NARLP---------------------VKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLG 271
Query: 341 YPPF 344
P+
Sbjct: 272 VNPY 275
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 32/250 (12%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+E + +G+G FG+V C G+ K+ ++ R E R E N+L ++ +
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR---EAARLEINVLKKIKEKD 77
Query: 168 IVQLFYSFQDSDFLYL-----IMEYLPGGDIMTLLMREDILSEDV--ARFYIAESVLAIH 220
F SD+ I L G + L + + R + A+
Sbjct: 78 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 137
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H++ H D+KP+N++ S+F + L +++ S E++ + N
Sbjct: 138 FLHENQLTHTDLKPENILFVN------SEF---ETLYNEHKSC--EEKSVKNTSIRVADF 186
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
G E + V T Y PEV+L+ G+ CD WS+G I++E G
Sbjct: 187 GSATFDHEH-----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 235
Query: 341 YPPFCSDDPR 350
+ F + + R
Sbjct: 236 FTLFQTHENR 245
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 103 IGIDDFEQLTLIGKGAFGEVR-----LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
IG D L +G G+FG VR KT A+K LK + + ++ E
Sbjct: 15 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 72
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED--ILSEDVARFYIAES 215
N + +D R +++L Y + + ++ E P G ++ L + L ++R Y +
Sbjct: 73 NAMHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQV 130
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + ++HRD+ NL+L +K+ DFGL + L D+ + QE
Sbjct: 131 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-------DDHYVMQE- 182
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
R + ++ + APE L + + D W G ++
Sbjct: 183 ---------------------HRKVPFA------WCAPESLKTRTFSHASDTWMFGVTLW 215
Query: 336 EML 338
EM
Sbjct: 216 EMF 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 103 IGIDDFEQLTLIGKGAFGEVR-----LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
IG D L +G G+FG VR KT A+K LK + + ++ E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 62
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED--ILSEDVARFYIAES 215
N + +D R +++L Y + + ++ E P G ++ L + L ++R Y +
Sbjct: 63 NAMHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQV 120
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + ++HRD+ NL+L +K+ DFGL + L D+ + QE
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-------DDHYVMQE- 172
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
R + ++ + APE L + + D W G ++
Sbjct: 173 ---------------------HRKVPFA------WCAPESLKTRTFSHASDTWMFGVTLW 205
Query: 336 EML 338
EM
Sbjct: 206 EMF 208
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 32/250 (12%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+E + +G+G FG+V C G+ K+ ++ R E R E N+L ++ +
Sbjct: 30 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR---EAARLEINVLKKIKEKD 86
Query: 168 IVQLFYSFQDSDFLYL-----IMEYLPGGDIMTLLMREDILSEDV--ARFYIAESVLAIH 220
F SD+ I L G + L + + R + A+
Sbjct: 87 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 146
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H++ H D+KP+N++ S+F + L +++ S E++ + N
Sbjct: 147 FLHENQLTHTDLKPENILFVN------SEF---ETLYNEHKSC--EEKSVKNTSIRVADF 195
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
G E + V T Y PEV+L+ G+ CD WS+G I++E G
Sbjct: 196 GSATFDHEH-----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 244
Query: 341 YPPFCSDDPR 350
+ F + + R
Sbjct: 245 FTLFQTHENR 254
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 32/250 (12%)
Query: 108 FEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRC 167
+E + +G+G FG+V C G+ K+ ++ R E R E N+L ++ +
Sbjct: 53 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYR---EAARLEINVLKKIKEKD 109
Query: 168 IVQLFYSFQDSDFLYL-----IMEYLPGGDIMTLLMREDILSEDV--ARFYIAESVLAIH 220
F SD+ I L G + L + + R + A+
Sbjct: 110 KENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALR 169
Query: 221 SIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAE 280
+H++ H D+KP+N++ S+F + L +++ S E++ + N
Sbjct: 170 FLHENQLTHTDLKPENILFVN------SEF---ETLYNEHKSC--EEKSVKNTSIRVADF 218
Query: 281 GQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLIG 340
G E + V T Y PEV+L+ G+ CD WS+G I++E G
Sbjct: 219 GSATFDHEH-----------HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRG 267
Query: 341 YPPFCSDDPR 350
+ F + + R
Sbjct: 268 FTLFQTHENR 277
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 179 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 341 YPPF 344
P+
Sbjct: 217 SKPY 220
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 103 IGIDDFEQLTLIGKGAFGEVR-----LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
IG D L +G G+FG VR KT A+K LK + + ++ E
Sbjct: 5 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 62
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED--ILSEDVARFYIAES 215
N + +D R +++L Y + + ++ E P G ++ L + L ++R Y +
Sbjct: 63 NAMHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQV 120
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + ++HRD+ NL+L +K+ DFGL + L D+ + QE
Sbjct: 121 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-------DDHYVMQE- 172
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
R + ++ + APE L + + D W G ++
Sbjct: 173 ---------------------HRKVPFA------WCAPESLKTRTFSHASDTWMFGVTLW 205
Query: 336 EML 338
EM
Sbjct: 206 EMF 208
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 104/250 (41%), Gaps = 56/250 (22%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 35 LGRGAFGQVIEADAFGIDKT-ATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLL------------MREDILSEDVARFYIAES 215
V L + + L +I+E+ G++ T L + +D L+ + Y +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + +HRD+ N++L + +K+ DFGL + D Y +D D + +
Sbjct: 154 AKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLAR---DIY-----KDPDYVRK-- 203
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
G +P L +MAPE + + Y ++ D WS G +++
Sbjct: 204 -----GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFGVLLW 237
Query: 336 EML-IGYPPF 344
E+ +G P+
Sbjct: 238 EIFSLGASPY 247
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 95/243 (39%), Gaps = 46/243 (18%)
Query: 103 IGIDDFEQLTLIGKGAFGEVR-----LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
IG D L +G G+FG VR KT A+K LK + + ++ E
Sbjct: 9 IGEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVS--VAVKCLKPDVLSQPEAMDDFIREV 66
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED--ILSEDVARFYIAES 215
N + +D R +++L Y + + ++ E P G ++ L + L ++R Y +
Sbjct: 67 NAMHSLDHRNLIRL-YGVVLTPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSR-YAVQV 124
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQET 275
+ + ++HRD+ NL+L +K+ DFGL + L D+ + QE
Sbjct: 125 AEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN-------DDHYVMQE- 176
Query: 276 VSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMY 335
R + ++ + APE L + + D W G ++
Sbjct: 177 ---------------------HRKVPFA------WCAPESLKTRTFSHASDTWMFGVTLW 209
Query: 336 EML 338
EM
Sbjct: 210 EMF 212
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/252 (21%), Positives = 103/252 (40%), Gaps = 58/252 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 37 LGRGAFGQVIEADAFGIDKT-ATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLL--------------MREDILSEDVARFYIA 213
V L + + L +I+E+ G++ T L + +D L+ + Y
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 214 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
+ + + +HRD+ N++L + +K+ DFGL + + +D D + +
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIX--------KDPDXVRK 207
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAI 333
G +P L +MAPE + + Y ++ D WS G +
Sbjct: 208 -------GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFGVL 239
Query: 334 MYEML-IGYPPF 344
++E+ +G P+
Sbjct: 240 LWEIFSLGASPY 251
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 179 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 341 YPPF 344
P+
Sbjct: 217 SKPY 220
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 76 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 180
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 181 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 341 YPPF 344
P+
Sbjct: 219 SKPY 222
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 76 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFG K L +E AEG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--------------AEEKEYHAEG 180
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 181 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 341 YPPF 344
P+
Sbjct: 219 SKPY 222
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 181
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 182 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 341 YPPF 344
P+
Sbjct: 220 SKPY 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 26 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 83
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 84 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 188
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 189 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 226
Query: 341 YPPF 344
P+
Sbjct: 227 SKPY 230
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 41 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 98
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 99 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 203
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 204 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 241
Query: 341 YPPF 344
P+
Sbjct: 242 SKPY 245
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 181
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 182 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 341 YPPF 344
P+
Sbjct: 220 SKPY 223
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 84/170 (49%), Gaps = 12/170 (7%)
Query: 98 LQRRKIGIDDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSER 157
L+ ++ D+F ++G+G FG+V R G + A+K+LK+ E + G+++ ++E
Sbjct: 22 LRELQVASDNFXNKNILGRGGFGKVYKGRL-ADGXLVAVKRLKE-ERTQGGELQ-FQTEV 78
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDV----ARFYIA 213
+++ R +++L L+ Y+ G + + L RE S+ R IA
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL-RERPESQPPLDWPKRQRIA 137
Query: 214 -ESVLAIHSIHQH---NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDK 259
S + +H H +HRD+K N++LD+ + DFGL K ++ K
Sbjct: 138 LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYK 187
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 80
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 81 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 185
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 186 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 341 YPPF 344
P+
Sbjct: 224 SKPY 227
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 96/239 (40%), Gaps = 51/239 (21%)
Query: 114 IGKGAFGEVR---LCRAKTTGEIFAMKKLKK--SEMLKRGQVEHVRSERNLLAEVDSRCI 168
IG+G FG+V + A+K K S+ ++ E E + + D I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 453
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF--YIAESVLAIHSIHQHN 226
V+L ++ +++IME G++ + L S D+A Y + A+ +
Sbjct: 454 VKLIGVITENP-VWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKR 511
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
+VHRDI N+++ N +KL DFGL + +ED
Sbjct: 512 FVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDS--------------------------- 544
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 545 ----TYYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 19 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 76
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 77 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 181
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 182 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 219
Query: 341 YPPF 344
P+
Sbjct: 220 SKPY 223
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 22 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 79
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 80 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 184
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 185 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 222
Query: 341 YPPF 344
P+
Sbjct: 223 SKPY 226
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 76 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFG K L +E AEG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--------------AEEKEYHAEG 180
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 181 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 341 YPPF 344
P+
Sbjct: 219 SKPY 222
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 19/154 (12%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMK----KLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
IG G+FG++ L +GE A+K K K ++ H+ S+ + + I
Sbjct: 17 IGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQL-------HIESKFYKMMQ-GGVGIP 68
Query: 170 QLFYSFQDSDFLYLIMEYLPGG--DIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+ + + D+ ++ME L D+ R+ S + + I IH N+
Sbjct: 69 SIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHSKNF 126
Query: 228 VHRDIKPDNLI--LDKNGHL-KLSDFGLCKPLED 258
+HRD+KPDN + L K G+L + DFGL K D
Sbjct: 127 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++ GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 80
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 81 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 185
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 186 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 341 YPPF 344
P+
Sbjct: 224 SKPY 227
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 20 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 77
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LIM+ +P G ++ + +D + + + ++
Sbjct: 78 VDNPHVCRLL-GICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFG K L +E AEG
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--------------AEEKEYHAEG 182
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 183 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 220
Query: 341 YPPF 344
P+
Sbjct: 221 SKPY 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 67
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 68 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 172
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 173 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 210
Query: 341 YPPF 344
P+
Sbjct: 211 SKPY 214
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 179 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 341 YPPF 344
P+
Sbjct: 217 SKPY 220
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 113 LIGKGAFGEVR---LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G+G FGEV K A+K KK L E SE ++ +D IV
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIV 72
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILSEDVARFYIAESVLAIHSIHQH 225
+L + + ++IME P G++ L R +L+ + I +++ + SI
Sbjct: 73 KLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI--- 128
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
N VHRDI N+++ +KL DFGL + +EDED + +V+ +WM
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSR---------YIEDEDYY-KASVTRLPIKWMS 178
Query: 286 PK 287
P+
Sbjct: 179 PE 180
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 113 LIGKGAFGEVR---LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G+G FGEV K A+K KK L E SE ++ +D IV
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIV 88
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILSEDVARFYIAESVLAIHSIHQH 225
+L + + ++IME P G++ L R +L+ + I +++ + SI
Sbjct: 89 KLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI--- 144
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
N VHRDI N+++ +KL DFGL + +EDED + +V+ +WM
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSR---------YIEDEDYY-KASVTRLPIKWMS 194
Query: 286 PK 287
P+
Sbjct: 195 PE 196
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 83/182 (45%), Gaps = 23/182 (12%)
Query: 113 LIGKGAFGEVR---LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
++G+G FGEV K A+K KK L E SE ++ +D IV
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNK--EKFMSEAVIMKNLDHPHIV 76
Query: 170 QLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED----ILSEDVARFYIAESVLAIHSIHQH 225
+L + + ++IME P G++ L R +L+ + I +++ + SI
Sbjct: 77 KLI-GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI--- 132
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMM 285
N VHRDI N+++ +KL DFGL + +EDED + +V+ +WM
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSR---------YIEDEDYY-KASVTRLPIKWMS 182
Query: 286 PK 287
P+
Sbjct: 183 PE 184
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV-EHVRSERNLLAEVDSRCIVQLF 172
IG+G FG+V + +K + V E E + + D IV+L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIHQHNYVHRD 231
++ +++IME G++ + L +R+ L Y + A+ + +VHRD
Sbjct: 80 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 138
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
I N+++ N +KL DFGL + +ED
Sbjct: 139 IAARNVLVSSNDCVKLGDFGLSRYMEDS-------------------------------T 167
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 168 YYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 215
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 45/236 (19%)
Query: 114 IGKGAFGEVR---LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQ 170
IG+G FG+V + A+K K E E + + D IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVK 75
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIHQHNYVH 229
L ++ +++IME G++ + L +R+ L Y + A+ + +VH
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RDI N+++ N +KL DFGL + +ED
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDS------------------------------ 164
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 165 -TYYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 45/236 (19%)
Query: 114 IGKGAFGEVR---LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQ 170
IG+G FG+V + A+K K E E + + D IV+
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVK 103
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIHQHNYVH 229
L ++ +++IME G++ + L +R+ L Y + A+ + +VH
Sbjct: 104 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 162
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RDI N+++ N +KL DFGL + +ED
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYMEDS------------------------------ 192
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 193 -TYYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 241
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV-EHVRSERNLLAEVDSRCIVQLF 172
IG+G FG+V + +K + V E E + + D IV+L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIHQHNYVHRD 231
++ +++IME G++ + L +R+ L Y + A+ + +VHRD
Sbjct: 81 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 139
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
I N+++ N +KL DFGL + +ED
Sbjct: 140 IAARNVLVSSNDCVKLGDFGLSRYMEDS-------------------------------T 168
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 169 YYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 216
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 102/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 13 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 70
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 71 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 175
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 176 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 213
Query: 341 YPPF 344
P+
Sbjct: 214 SKPY 217
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 93/237 (39%), Gaps = 47/237 (19%)
Query: 114 IGKGAFGEVR---LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQ 170
IG+G FG+V + A+K K E E + + D IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVK 75
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF--YIAESVLAIHSIHQHNYV 228
L ++ +++IME G++ + L S D+A Y + A+ + +V
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 229 HRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKE 288
HRDI N+++ N +KL DFGL + +ED T +A K
Sbjct: 134 HRDIAARNVLVSSNDCVKLGDFGLSRYMED---------------STXXKAS------KG 172
Query: 289 RLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 173 KL----------------PIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 54/100 (54%), Gaps = 8/100 (8%)
Query: 157 RNLLAEVDSRCIVQLFYSFQDSD-----FLYLIMEYLPGGDIMTLLMREDILSEDVARFY 211
R LAEV IVQ+F + +D Y++MEY+ G + ++ ++E +A Y
Sbjct: 130 RQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIA--Y 187
Query: 212 IAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFG 251
+ E + A+ +H V+ D+KP+N++L + LKL D G
Sbjct: 188 LLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLG 226
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 45/236 (19%)
Query: 114 IGKGAFGEVR---LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQ 170
IG+G FG+V + A+K K E E + + D IV+
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVK 72
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIHQHNYVH 229
L ++ +++IME G++ + L +R+ L Y + A+ + +VH
Sbjct: 73 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 131
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RDI N+++ N +KL DFGL + +ED
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYMEDS------------------------------ 161
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 162 -TYYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 210
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 92/236 (38%), Gaps = 45/236 (19%)
Query: 114 IGKGAFGEVR---LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQ 170
IG+G FG+V + A+K K E E + + D IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVK 75
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIHQHNYVH 229
L ++ +++IME G++ + L +R+ L Y + A+ + +VH
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 230 RDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKER 289
RDI N+++ N +KL DFGL + +ED
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDS------------------------------ 164
Query: 290 LQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 165 -TYYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 92/234 (39%), Gaps = 41/234 (17%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV-EHVRSERNLLAEVDSRCIVQLF 172
IG+G FG+V + +K + V E E + + D IV+L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 173 YSFQDSDFLYLIMEYLPGGDIMTLL-MREDILSEDVARFYIAESVLAIHSIHQHNYVHRD 231
++ +++IME G++ + L +R+ L Y + A+ + +VHRD
Sbjct: 83 GVITENP-VWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRD 141
Query: 232 IKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQ 291
I N+++ N +KL DFGL + +ED
Sbjct: 142 IAARNVLVSSNDCVKLGDFGLSRYMEDS-------------------------------T 170
Query: 292 QWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 171 YYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 218
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMK----KLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
IG G+FG++ L GE A+K K K ++ H+ S+ + + I
Sbjct: 17 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL-------HIESKIYKMMQ-GGVGIP 68
Query: 170 QLFYSFQDSDFLYLIMEYLPGG--DIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+ + + D+ ++ME L D+ R+ S + + I IH N+
Sbjct: 69 TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHSKNF 126
Query: 228 VHRDIKPDNLI--LDKNGHL-KLSDFGLCKPLED 258
+HRD+KPDN + L K G+L + DFGL K D
Sbjct: 127 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+GAFG+V + A K + K+ K + ++ + + SE +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 94 MKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 151
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------ 205
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + +K+ +T G L +MAPE L
Sbjct: 206 --------DINN-----------------IDYYKK-------TTNGRLPVKWMAPEALFD 233
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 60/254 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 35 LGRGAFGQVIEADAFGIDKT-ATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLLMRE-------DILSEDVARFYIAESVLAIH 220
V L + + L +I+E+ G++ T L + + ED+ + ++ L +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 221 SIH---------QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
S +HRD+ N++L + +K+ DFGL + D Y +D D +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIY-----KDPDXV 205
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+ G +P L +MAPE + + Y ++ D WS G
Sbjct: 206 RK-------GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFG 237
Query: 332 AIMYEML-IGYPPF 344
+++E+ +G P+
Sbjct: 238 VLLWEIFSLGASPY 251
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/253 (21%), Positives = 103/253 (40%), Gaps = 59/253 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 36 LGRGAFGQVIEADAFGIDKT-ATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 94
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLL---------------MREDILSEDVARFYI 212
V L + + L +I+E+ G++ T L + +D L+ + Y
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 213 AESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIIN 272
+ + + +HRD+ N++L + +K+ DFGL + + +D D +
Sbjct: 155 FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX--------KDPDXVR 206
Query: 273 QETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGA 332
+ G +P L +MAPE + + Y ++ D WS G
Sbjct: 207 K-------GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFGV 238
Query: 333 IMYEML-IGYPPF 344
+++E+ +G P+
Sbjct: 239 LLWEIFSLGASPY 251
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 60/254 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 26 LGRGAFGQVIEADAFGIDKT-ATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLLMRE-------DILSEDVARFYIAESVLAIH 220
V L + + L +I+E+ G++ T L + + ED+ + ++ L +
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 221 SIH---------QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
S +HRD+ N++L + +K+ DFGL + + +D D +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX--------KDPDXV 196
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+ G +P L +MAPE + + Y ++ D WS G
Sbjct: 197 RK-------GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFG 228
Query: 332 AIMYEML-IGYPPF 344
+++E+ +G P+
Sbjct: 229 VLLWEIFSLGASPY 242
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+GAFG+V + A K + K+ K + ++ + + SE +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 151
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------ 205
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + + +T G L +MAPE L
Sbjct: 206 --------DINNIDXXKK------------------------TTNGRLPVKWMAPEALFD 233
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+GAFG+V + A K + K+ K + ++ + + SE +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINR--VPE 151
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------ 205
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + + +T G L +MAPE L
Sbjct: 206 --------DINNIDXXKK------------------------TTNGRLPVKWMAPEALFD 233
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 60/254 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 72 LGRGAFGQVIEADAFGIDKT-ATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 130
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLLMRE-------DILSEDVARFYIAESVLAIH 220
V L + + L +I+E+ G++ T L + + ED+ + ++ L +
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 221 SIH---------QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
S +HRD+ N++L + +K+ DFGL + D Y +D D +
Sbjct: 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIY-----KDPDYV 242
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+ G +P L +MAPE + + Y ++ D WS G
Sbjct: 243 RK-------GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFG 274
Query: 332 AIMYEML-IGYPPF 344
+++E+ +G P+
Sbjct: 275 VLLWEIFSLGASPY 288
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 105/254 (41%), Gaps = 60/254 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 35 LGRGAFGQVIEADAFGIDKT-ATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLLMRE-------DILSEDVARFYIAESVLAIH 220
V L + + L +I+E+ G++ T L + + ED+ + ++ L +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 221 SIH---------QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
S +HRD+ N++L + +K+ DFGL + D Y +D D +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIY-----KDPDYV 205
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+ G +P L +MAPE + + Y ++ D WS G
Sbjct: 206 RK-------GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFG 237
Query: 332 AIMYEML-IGYPPF 344
+++E+ +G P+
Sbjct: 238 VLLWEIFSLGASPY 251
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 109/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+GAFG+V + A K + K+ K + ++ + + SE +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 94 MKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 151
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------ 205
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + +K+ +T G L +MAPE L
Sbjct: 206 --------DINN-----------------IDYYKK-------TTNGRLPVKWMAPEALFD 233
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 104/254 (40%), Gaps = 60/254 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 35 LGRGAFGQVIEADAFGIDKT-ATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLLMRE-------DILSEDVARFYIAESVLAIH 220
V L + + L +I+E+ G++ T L + + ED+ + ++ L +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 221 SIH---------QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
S +HRD+ N++L + +K+ DFGL + + +D D +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX--------KDPDXV 205
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+ G +P L +MAPE + + Y ++ D WS G
Sbjct: 206 RK-------GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFG 237
Query: 332 AIMYEML-IGYPPF 344
+++E+ +G P+
Sbjct: 238 VLLWEIFSLGASPY 251
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 104/254 (40%), Gaps = 60/254 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 37 LGRGAFGQVIEADAFGIDKT-ATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLL----------------MREDILSEDVARFY 211
V L + + L +I+E+ G++ T L + +D L+ + Y
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 212 IAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
+ + + +HRD+ N++L + +K+ DFGL + D Y +D D +
Sbjct: 156 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIY-----KDPDYV 207
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+ G +P L +MAPE + + Y ++ D WS G
Sbjct: 208 RK-------GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFG 239
Query: 332 AIMYEML-IGYPPF 344
+++E+ +G P+
Sbjct: 240 VLLWEIFSLGASPY 253
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 103/265 (38%), Gaps = 68/265 (25%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+GAFG+V + A K + K+ K + ++ + + SE +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 151
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL + + +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI- 210
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG 320
D T +W MAPE L +
Sbjct: 211 --------DYYKNTTNGRLPVKW---------------------------MAPEALFDRV 235
Query: 321 YGMECDWWSLGAIMYEML-IGYPPF 344
Y + D WS G +M+E+ +G P+
Sbjct: 236 YTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMK----KLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
IG G+FG++ L GE A+K K K ++ H+ S+ + + I
Sbjct: 15 IGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQL-------HIESKIYKMMQ-GGVGIP 66
Query: 170 QLFYSFQDSDFLYLIMEYLPGG--DIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+ + + D+ ++ME L D+ R+ S + + I IH N+
Sbjct: 67 TIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRK--FSLKTVLLLADQMISRIEYIHSKNF 124
Query: 228 VHRDIKPDNLI--LDKNGHL-KLSDFGLCKPLED 258
+HRD+KPDN + L K G+L + DFGL K D
Sbjct: 125 IHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 158
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 105/261 (40%), Gaps = 68/261 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRG----QVEHVRSERNLLAEVDSR-CI 168
+G GAFG+V A G+ A+ K+ +MLK + E + SE +++ + I
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVA-VKMLKSTAHADEKEALMSELKIMSHLGQHENI 97
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMR--EDILSEDVAR----------------- 209
V L + + +I EY GD++ L R E +L +A
Sbjct: 98 VNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLEL 157
Query: 210 ----FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHL-KLSDFGLCKPLEDKYSSIL 264
+ ++ + + N +HRD+ N++L NGH+ K+ DFGL +
Sbjct: 158 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFGLAR---------- 206
Query: 265 LEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGME 324
DI+N +G +P + +MAPE + Y ++
Sbjct: 207 ----DIMNDSNYI-VKGNARLP---------------------VKWMAPESIFDCVYTVQ 240
Query: 325 CDWWSLGAIMYEML-IGYPPF 344
D WS G +++E+ +G P+
Sbjct: 241 SDVWSYGILLWEIFSLGLNPY 261
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 104/254 (40%), Gaps = 60/254 (23%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQV--EH--VRSERNLLAEVDSRC-I 168
+G+GAFG+V A + A + +MLK G EH + SE +L + +
Sbjct: 26 LGRGAFGQVIEADAFGIDKT-ATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 169 VQLFYSF-QDSDFLYLIMEYLPGGDIMTLLMRE-------DILSEDVARFYIAESVLAIH 220
V L + + L +I E+ G++ T L + + ED+ + ++ L +
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 221 SIH---------QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDII 271
S +HRD+ N++L + +K+ DFGL + D Y +D D +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIY-----KDPDYV 196
Query: 272 NQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLG 331
+ G +P L +MAPE + + Y ++ D WS G
Sbjct: 197 RK-------GDARLP---------------------LKWMAPETIFDRVYTIQSDVWSFG 228
Query: 332 AIMYEML-IGYPPF 344
+++E+ +G P+
Sbjct: 229 VLLWEIFSLGASPY 242
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 104/259 (40%), Gaps = 70/259 (27%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-----EMLKRGQV--EH--VRSERNLLAEVD 164
+G+GAFG+V + F + K +MLK G EH + SE +L +
Sbjct: 26 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 165 SRC-IVQLFYSF-QDSDFLYLIMEYLPGGDIMTLLMRE-------DILSEDVARFYIAES 215
+V L + + L +I E+ G++ T L + + ED+ + ++
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 216 VLAIHSIH---------QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
L +S +HRD+ N++L + +K+ DFGL + D Y +
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLAR---DIY-----K 191
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D D + + G +P L +MAPE + + Y ++ D
Sbjct: 192 DPDYVRK-------GDARLP---------------------LKWMAPETIFDRVYTIQSD 223
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 224 VWSFGVLLWEIFSLGASPY 242
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 103/259 (39%), Gaps = 70/259 (27%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-----EMLKRGQV--EH--VRSERNLLAEVD 164
+G+GAFG+V + F + K +MLK G EH + SE +L +
Sbjct: 26 LGRGAFGQV------IEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIG 79
Query: 165 SRC-IVQLFYSF-QDSDFLYLIMEYLPGGDIMTLLMRE-------DILSEDVARFYIAES 215
+V L + + L +I E+ G++ T L + + ED+ + ++
Sbjct: 80 HHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLE 139
Query: 216 VLAIHSIH---------QHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
L +S +HRD+ N++L + +K+ DFGL + + +
Sbjct: 140 HLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIX--------K 191
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D D + + G +P L +MAPE + + Y ++ D
Sbjct: 192 DPDXVRK-------GDARLP---------------------LKWMAPETIFDRVYTIQSD 223
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 224 VWSFGVLLWEIFSLGASPY 242
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 109/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+GAFG+V + A K + K+ K + ++ + + SE +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 151
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N ++++DFGL +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLAR------ 205
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + +K+ +T G L +MAPE L
Sbjct: 206 --------DINN-----------------IDYYKK-------TTNGRLPVKWMAPEALFD 233
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 108/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+GAFG+V + A K + K+ K + + + + SE +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEE-DLSDLVSEMEM 93
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 151
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------ 205
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + +K+ +T G L +MAPE L
Sbjct: 206 --------DINN-----------------IDYYKK-------TTNGRLPVKWMAPEALFD 233
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 18 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 75
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 76 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFG K L +E AEG
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--------------AEEKEYHAEG 180
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 181 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 218
Query: 341 YPPF 344
P+
Sbjct: 219 SKPY 222
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+ +L+++ K + + E ++A
Sbjct: 50 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANK--EILDEAYVMAS 107
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 108 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 212
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 213 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 250
Query: 341 YPPF 344
P+
Sbjct: 251 SKPY 254
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++ GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 16 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 179 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 341 YPPF 344
P+
Sbjct: 217 SKPY 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 95/239 (39%), Gaps = 51/239 (21%)
Query: 114 IGKGAFGEVR---LCRAKTTGEIFAMKKLKK--SEMLKRGQVEHVRSERNLLAEVDSRCI 168
IG+G FG+V + A+K K S+ ++ E E + + D I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVR----EKFLQEALTMRQFDHPHI 453
Query: 169 VQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF--YIAESVLAIHSIHQHN 226
V+L ++ +++IME G++ + L S D+A Y + A+ +
Sbjct: 454 VKLIGVITENP-VWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKR 511
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
+VHRDI N+++ +KL DFGL + +ED
Sbjct: 512 FVHRDIAARNVLVSATDCVKLGDFGLSRYMEDS--------------------------- 544
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 545 ----TYYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 593
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 23 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 80
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 81 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFG K L +E AEG
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--------------AEEKEYHAEG 185
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 186 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 341 YPPF 344
P+
Sbjct: 224 SKPY 227
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 111/267 (41%), Gaps = 55/267 (20%)
Query: 113 LIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLK-RGQVEHVRSERNLLAEVDSRCIVQL 171
++ +G F V + +G +A+K+L +E K R ++ V + L + IVQ
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPN---IVQF 91
Query: 172 FYSF----QDSDFL---YLIMEYLPGGDIMTLLMREDI---LSEDVARFYIAESVLAIHS 221
+ ++SD +L++ L G ++ L + + LS D ++ A+
Sbjct: 92 CSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQH 151
Query: 222 IHQHN--YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEA 279
+H+ +HRD+K +NL+L G +KL DFG + T+S
Sbjct: 152 MHRQKPPIIHRDLKVENLLLSNQGTIKLCDFG--------------------SATTISHY 191
Query: 280 EGQWMMPKERLQQWKRNRRALAYSTV---GTLDYMAPEVL-LKKGY--GMECDWWSLGAI 333
W RRAL + T Y PE++ L + G + D W+LG I
Sbjct: 192 PD---------YSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCI 242
Query: 334 MYEMLIGYPPFCSDDPRITCRKIVNWK 360
+Y + PF D ++ +IVN K
Sbjct: 243 LYLLCFRQHPF-EDGAKL---RIVNGK 265
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++ GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 23 EFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 80
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 81 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFGL K L +E AEG
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--------------AEEKEYHAEG 185
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 186 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 223
Query: 341 YPPF 344
P+
Sbjct: 224 SKPY 227
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 101/244 (41%), Gaps = 45/244 (18%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGE----IFAMKKLKKSEMLKRGQVEHVRSERNLLAE 162
+F+++ ++G GAFG V GE A+K+L+++ K + + E ++A
Sbjct: 16 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANK--EILDEAYVMAS 73
Query: 163 VDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIAESVLAIHS 221
VD+ + +L + + LI + +P G ++ + +D + + + ++
Sbjct: 74 VDNPHVCRLL-GICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 222 IHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEG 281
+ VHRD+ N+++ H+K++DFG K L +E AEG
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--------------AEEKEYHAEG 178
Query: 282 QWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYE-MLIG 340
+ + +MA E +L + Y + D WS G ++E M G
Sbjct: 179 GKV----------------------PIKWMALESILHRIYTHQSDVWSYGVTVWELMTFG 216
Query: 341 YPPF 344
P+
Sbjct: 217 SKPY 220
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 86/182 (47%), Gaps = 8/182 (4%)
Query: 81 QEEMLRNLERRETEYMRLQRRKIGIDDFEQLTLIGKGAFGEVR----LCRAKTTGEIFAM 136
+ E++ L T + Q R + + +++ ++G GAFG V + +T A+
Sbjct: 13 ETELVEPLTPSGTAPNQAQLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAI 72
Query: 137 KKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTL 196
K L ++ K VE + E ++A +D +V+L S + L+ + +P G ++
Sbjct: 73 KILNETTGPK-ANVEFM-DEALIMASMDHPHLVRLL-GVCLSPTIQLVTQLMPHGCLLEY 129
Query: 197 LM-REDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKP 255
+ +D + + + + + + + VHRD+ N+++ H+K++DFGL +
Sbjct: 130 VHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARL 189
Query: 256 LE 257
LE
Sbjct: 190 LE 191
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/265 (21%), Positives = 103/265 (38%), Gaps = 68/265 (25%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+G FG+V + A K + K+ K + ++ + V SE +
Sbjct: 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLV-SEMEM 139
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 140 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 197
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL + + +
Sbjct: 198 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNI- 256
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKG 320
D + T +W MAPE L +
Sbjct: 257 --------DYYKKTTNGRLPVKW---------------------------MAPEALFDRV 281
Query: 321 YGMECDWWSLGAIMYEML-IGYPPF 344
Y + D WS G +M+E+ +G P+
Sbjct: 282 YTHQSDVWSFGVLMWEIFTLGGSPY 306
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 91/237 (38%), Gaps = 47/237 (19%)
Query: 114 IGKGAFGEVR---LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQ 170
IG+G FG+V + A+K K E E + + D IV+
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCT--SDSVREKFLQEALTMRQFDHPHIVK 75
Query: 171 LFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF--YIAESVLAIHSIHQHNYV 228
L ++ +++IME G++ + L S D+A Y + A+ + +V
Sbjct: 76 LIGVITENP-VWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFV 133
Query: 229 HRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKE 288
HRDI N+++ +KL DFGL + +ED
Sbjct: 134 HRDIAARNVLVSATDCVKLGDFGLSRYMEDS----------------------------- 164
Query: 289 RLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
+K ++ L + +MAPE + + + D W G M+E+L+ G PF
Sbjct: 165 --TYYKASKGKLP------IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPF 213
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 18/113 (15%)
Query: 156 ERNLLAEVDSR-CIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF---- 210
E LL E D +++ F + +D F Y+ +E + ++E + +D A
Sbjct: 67 EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE------LCAATLQEYVEQKDFAHLGLEP 120
Query: 211 --YIAESVLAIHSIHQHNYVHRDIKPDNLILD-KNGHLK----LSDFGLCKPL 256
+ ++ + +H N VHRD+KP N+++ N H K +SDFGLCK L
Sbjct: 121 ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 66/154 (42%), Gaps = 19/154 (12%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMK----KLKKSEMLKRGQVEHVRSERNLLAEVDSRCIV 169
IG G+FGE+ L T E A+K K K ++L ++ + + V +
Sbjct: 15 IGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGV- 73
Query: 170 QLFYSFQDSDFLYLIMEYLPGG--DIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNY 227
+ D+ L+M+ L D+ R+ LS + + + +H ++
Sbjct: 74 -------EGDYNVLVMDLLGPSLEDLFNFCSRK--LSLKTVLMLADQMINRVEFVHSKSF 124
Query: 228 VHRDIKPDNLILD---KNGHLKLSDFGLCKPLED 258
+HRDIKPDN ++ + + + DFGL K D
Sbjct: 125 LHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRD 158
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+G FG+V + A K + K+ K + ++ + + SE +
Sbjct: 27 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 85
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 86 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 143
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 144 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------ 197
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + +K+ +T G L +MAPE L
Sbjct: 198 --------DINN-----------------IDYYKK-------TTNGRLPVKWMAPEALFD 225
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 226 RVYTHQSDVWSFGVLMWEIFTLGGSPY 252
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+G FG+V + A K + K+ K + ++ + + SE +
Sbjct: 24 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 82
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 83 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 140
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 141 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------ 194
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + +K+ +T G L +MAPE L
Sbjct: 195 --------DINN-----------------IDYYKK-------TTNGRLPVKWMAPEALFD 222
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 223 RVYTHQSDVWSFGVLMWEIFTLGGSPY 249
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+G FG+V + A K + K+ K + ++ + + SE +
Sbjct: 22 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 80
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+EY G++ L S D+ R + E
Sbjct: 81 MKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINR--VPE 138
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 139 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLAR------ 192
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + +K+ +T G L +MAPE L
Sbjct: 193 --------DINN-----------------IDYYKK-------TTNGRLPVKWMAPEALFD 220
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 221 RVYTHQSDVWSFGVLMWEIFTLGGSPY 247
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 96/259 (37%), Gaps = 82/259 (31%)
Query: 183 LIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-K 241
L+ EY+ D L IL++ RFY+ E + A+ H +HRD+KP N+++D +
Sbjct: 112 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 168
Query: 242 NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALA 301
L+L D+GL ++ P + + N R
Sbjct: 169 QKKLRLIDWGLA----------------------------EFYHPAQ-----EYNVR--- 192
Query: 302 YSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPPFCSD----DPRITCRKI 356
V + + PE+L+ + Y D WSLG ++ M+ PF D + K+
Sbjct: 193 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKV 249
Query: 357 VN------------------------------WKTCLKFPEEPKISDEARDLICHLL-CD 385
+ W+ + +S EA DL+ LL D
Sbjct: 250 LGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYD 309
Query: 386 VETRLGTRGVEELKEHPWF 404
+ RL + E EHP+F
Sbjct: 310 HQQRLTAK---EAMEHPYF 325
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 98/255 (38%), Gaps = 56/255 (21%)
Query: 109 EQLTL---IGKGAFGEVRLCRAKTTGEIFA--MKKLKKSEMLKRGQVEHVRSERNLLAEV 163
+Q TL +GKG FG VR + K F K+ K++++ +E E + E
Sbjct: 23 QQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEF 82
Query: 164 DSRCIVQLFYSFQDS------DFLYLIMEYLPGGDIMTLLMREDILS-------EDVARF 210
D + +L S +I+ ++ GD+ L+ I + + RF
Sbjct: 83 DHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRF 142
Query: 211 YIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDI 270
+ + + + N++HRD+ N +L ++ + ++DFGL + + YS D
Sbjct: 143 MV-DIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKI---YSG------DY 192
Query: 271 INQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSL 330
Q S+ +W +A E L Y + D W+
Sbjct: 193 YRQGCASKLPVKW---------------------------LALESLADNLYTVHSDVWAF 225
Query: 331 GAIMYEMLI-GYPPF 344
G M+E++ G P+
Sbjct: 226 GVTMWEIMTRGQTPY 240
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+GAFG+V + A K + K+ K + ++ + + SE +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+ Y G++ L S D+ R + E
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINR--VPE 151
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------ 205
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + +K+ +T G L +MAPE L
Sbjct: 206 --------DINN-----------------IDYYKK-------TTNGRLPVKWMAPEALFD 233
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 96/259 (37%), Gaps = 82/259 (31%)
Query: 183 LIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-K 241
L+ EY+ D L IL++ RFY+ E + A+ H +HRD+KP N+++D +
Sbjct: 117 LVFEYINNTDFKQLYQ---ILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 242 NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALA 301
L+L D+GL ++ P + + N R
Sbjct: 174 QKKLRLIDWGLA----------------------------EFYHPAQ-----EYNVR--- 197
Query: 302 YSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPPFCSD----DPRITCRKI 356
V + + PE+L+ + Y D WSLG ++ M+ PF D + K+
Sbjct: 198 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKV 254
Query: 357 VN------------------------------WKTCLKFPEEPKISDEARDLICHLL-CD 385
+ W+ + +S EA DL+ LL D
Sbjct: 255 LGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRYD 314
Query: 386 VETRLGTRGVEELKEHPWF 404
+ RL + E EHP+F
Sbjct: 315 HQQRLTAK---EAMEHPYF 330
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 108/312 (34%), Gaps = 100/312 (32%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQL-- 171
IGKG FGEV R K GE A+K R ER+ E + V L
Sbjct: 17 IGKGRFGEV--WRGKWRGEEVAVKIFSS------------REERSWFREAEIYQTVMLRH 62
Query: 172 -----FYSFQDSDF-----LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
F + + D L+L+ +Y G + L R + E + + ++ + H
Sbjct: 63 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH- 121
Query: 222 IHQH--------NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
+H HRD+K N+++ KNG ++D GL + +I DI
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI-----DI--- 173
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL-----------LKKG-- 320
P R VGT YMAPEVL K+
Sbjct: 174 -----------APNHR---------------VGTKRYMAPEVLDDSINMKHFESFKRADI 207
Query: 321 YGMECDWW------SLGAIMYEMLIGYPPFCSDDPRI-TCRKIV-----------NWKTC 362
Y M +W S+G I + + Y DP + RK+V W++C
Sbjct: 208 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC 267
Query: 363 LKFPEEPKISDE 374
KI E
Sbjct: 268 EALRVMAKIMRE 279
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 108/312 (34%), Gaps = 100/312 (32%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQL-- 171
IGKG FGEV R K GE A+K R ER+ E + V L
Sbjct: 12 IGKGRFGEV--WRGKWRGEEVAVKIFSS------------REERSWFREAEIYQTVMLRH 57
Query: 172 -----FYSFQDSDF-----LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
F + + D L+L+ +Y G + L R + E + + ++ + H
Sbjct: 58 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH- 116
Query: 222 IHQH--------NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
+H HRD+K N+++ KNG ++D GL + +I DI
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI-----DI--- 168
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL-----------LKKG-- 320
P R VGT YMAPEVL K+
Sbjct: 169 -----------APNHR---------------VGTKRYMAPEVLDDSINMKHFESFKRADI 202
Query: 321 YGMECDWW------SLGAIMYEMLIGYPPFCSDDPRI-TCRKIV-----------NWKTC 362
Y M +W S+G I + + Y DP + RK+V W++C
Sbjct: 203 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC 262
Query: 363 LKFPEEPKISDE 374
KI E
Sbjct: 263 EALRVMAKIMRE 274
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 108/312 (34%), Gaps = 100/312 (32%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQL-- 171
IGKG FGEV R K GE A+K R ER+ E + V L
Sbjct: 37 IGKGRFGEV--WRGKWRGEEVAVKIFSS------------REERSWFREAEIYQTVMLRH 82
Query: 172 -----FYSFQDSDF-----LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
F + + D L+L+ +Y G + L R + E + + ++ + H
Sbjct: 83 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH- 141
Query: 222 IHQH--------NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
+H HRD+K N+++ KNG ++D GL + +I DI
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI-----DI--- 193
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL-----------LKKG-- 320
P R VGT YMAPEVL K+
Sbjct: 194 -----------APNHR---------------VGTKRYMAPEVLDDSINMKHFESFKRADI 227
Query: 321 YGMECDWW------SLGAIMYEMLIGYPPFCSDDPRI-TCRKIV-----------NWKTC 362
Y M +W S+G I + + Y DP + RK+V W++C
Sbjct: 228 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC 287
Query: 363 LKFPEEPKISDE 374
KI E
Sbjct: 288 EALRVMAKIMRE 299
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 108/267 (40%), Gaps = 72/267 (26%)
Query: 109 EQLTL---IGKGAFGEVRLCRA------KTTGEIFAMKKLKKSEMLKRGQVEHVRSERNL 159
++LTL +G+GAFG+V + A K + K+ K + ++ + + SE +
Sbjct: 35 DKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEK-DLSDLVSEMEM 93
Query: 160 LAEVDS-RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDI----LSEDVARFYIAE 214
+ + + I+ L + LY+I+ Y G++ L S D+ R + E
Sbjct: 94 MKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINR--VPE 151
Query: 215 SVLAIHSIHQHNY--------------VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKY 260
+ + Y +HRD+ N+++ +N +K++DFGL +
Sbjct: 152 EQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLAR------ 205
Query: 261 SSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTL--DYMAPEVLLK 318
DI N + +K+ +T G L +MAPE L
Sbjct: 206 --------DINN-----------------IDYYKK-------TTNGRLPVKWMAPEALFD 233
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
+ Y + D WS G +M+E+ +G P+
Sbjct: 234 RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 108/312 (34%), Gaps = 100/312 (32%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQL-- 171
IGKG FGEV R K GE A+K R ER+ E + V L
Sbjct: 14 IGKGRFGEV--WRGKWRGEEVAVKIFSS------------REERSWFREAEIYQTVMLRH 59
Query: 172 -----FYSFQDSDF-----LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
F + + D L+L+ +Y G + L R + E + + ++ + H
Sbjct: 60 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH- 118
Query: 222 IHQH--------NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
+H HRD+K N+++ KNG ++D GL + +I DI
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI-----DI--- 170
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL-----------LKKG-- 320
P R VGT YMAPEVL K+
Sbjct: 171 -----------APNHR---------------VGTKRYMAPEVLDDSINMKHFESFKRADI 204
Query: 321 YGMECDWW------SLGAIMYEMLIGYPPFCSDDPRI-TCRKIV-----------NWKTC 362
Y M +W S+G I + + Y DP + RK+V W++C
Sbjct: 205 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC 264
Query: 363 LKFPEEPKISDE 374
KI E
Sbjct: 265 EALRVMAKIMRE 276
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 108/312 (34%), Gaps = 100/312 (32%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQL-- 171
IGKG FGEV R K GE A+K R ER+ E + V L
Sbjct: 50 IGKGRFGEV--WRGKWRGEEVAVKIFSS------------REERSWFREAEIYQTVMLRH 95
Query: 172 -----FYSFQDSDF-----LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
F + + D L+L+ +Y G + L R + E + + ++ + H
Sbjct: 96 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH- 154
Query: 222 IHQH--------NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
+H HRD+K N+++ KNG ++D GL + +I DI
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI-----DI--- 206
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL-----------LKKG-- 320
P R VGT YMAPEVL K+
Sbjct: 207 -----------APNHR---------------VGTKRYMAPEVLDDSINMKHFESFKRADI 240
Query: 321 YGMECDWW------SLGAIMYEMLIGYPPFCSDDPRI-TCRKIV-----------NWKTC 362
Y M +W S+G I + + Y DP + RK+V W++C
Sbjct: 241 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC 300
Query: 363 LKFPEEPKISDE 374
KI E
Sbjct: 301 EALRVMAKIMRE 312
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 75/312 (24%), Positives = 108/312 (34%), Gaps = 100/312 (32%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQL-- 171
IGKG FGEV R K GE A+K R ER+ E + V L
Sbjct: 11 IGKGRFGEV--WRGKWRGEEVAVKIFSS------------REERSWFREAEIYQTVMLRH 56
Query: 172 -----FYSFQDSDF-----LYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHS 221
F + + D L+L+ +Y G + L R + E + + ++ + H
Sbjct: 57 ENILGFIAADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAH- 115
Query: 222 IHQH--------NYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQ 273
+H HRD+K N+++ KNG ++D GL + +I DI
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTI-----DI--- 167
Query: 274 ETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVL-----------LKKG-- 320
P R VGT YMAPEVL K+
Sbjct: 168 -----------APNHR---------------VGTKRYMAPEVLDDSINMKHFESFKRADI 201
Query: 321 YGMECDWW------SLGAIMYEMLIGYPPFCSDDPRI-TCRKIV-----------NWKTC 362
Y M +W S+G I + + Y DP + RK+V W++C
Sbjct: 202 YAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSC 261
Query: 363 LKFPEEPKISDE 374
KI E
Sbjct: 262 EALRVMAKIMRE 273
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 35/119 (29%)
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
+VHRD+ N +LD+ +K++DFGL + + DK + D ++ +T ++ +W
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK-------EFDSVHNKTGAKLPVKW--- 201
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 202 ------------------------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 183 LIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD 240
+++ Y+ GD+ + E + +D+ F + + + + +VHRD+ N +LD
Sbjct: 110 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLD 168
Query: 241 KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRAL 300
+ +K++DFGL + + DK + D ++ +T ++ +W
Sbjct: 169 EKFTVKVADFGLARDMYDK-------EFDSVHNKTGAKLPVKW----------------- 204
Query: 301 AYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 205 ----------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 35/119 (29%)
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
+VHRD+ N +LD+ +K++DFGL + + DK + D ++ +T ++ +W
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK-------EFDSVHNKTGAKLPVKW--- 203
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 204 ------------------------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 8/164 (4%)
Query: 99 QRRKIGIDDFEQLTLIGKGAFGEVR----LCRAKTTGEIFAMKKLKKSEMLKRGQVEHVR 154
Q R + + +++ ++G GAFG V + +T A+K L ++ K VE +
Sbjct: 8 QLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPK-ANVEFM- 65
Query: 155 SERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-REDILSEDVARFYIA 213
E ++A +D +V+L S + L+ + +P G ++ + +D + + +
Sbjct: 66 DEALIMASMDHPHLVRLL-GVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCV 124
Query: 214 ESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLE 257
+ + + + VHRD+ N+++ H+K++DFGL + LE
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 168
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 183 LIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD 240
+++ Y+ GD+ + E + +D+ F + + + + +VHRD+ N +LD
Sbjct: 168 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLD 226
Query: 241 KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRAL 300
+ +K++DFGL + + DK + D ++ +T ++ +W
Sbjct: 227 EKFTVKVADFGLARDMYDK-------EFDSVHNKTGAKLPVKW----------------- 262
Query: 301 AYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 263 ----------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 73/165 (44%), Gaps = 38/165 (23%)
Query: 183 LIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD 240
+++ Y+ GD+ + E + +D+ F + + + + +VHRD+ N +LD
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKFLASKKFVHRDLAARNCMLD 167
Query: 241 KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRAL 300
+ +K++DFGL + + DK + D ++ +T ++ +W
Sbjct: 168 EKFTVKVADFGLARDMYDK-------EFDSVHNKTGAKLPVKW----------------- 203
Query: 301 AYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 204 ----------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 35/119 (29%)
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
+VHRD+ N +LD+ +K++DFGL + + DK + D ++ +T ++ +W
Sbjct: 159 FVHRDLAARNCMLDEKFTVKVADFGLARDMYDK-------EFDSVHNKTGAKLPVKW--- 208
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 209 ------------------------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 96/234 (41%), Gaps = 59/234 (25%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G FG V L ++ A+K +++ M + +E E ++ ++ +VQL+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 69
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI--------HSIHQH 225
+ + L+ E++ G + L + L + AE++L + + +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL-------FAAETLLGMCLDVCEGMAYLEEA 122
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+ +HRD+ N ++ +N +K+SDFG+ + L+D+Y+S
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS---------------------- 160
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ T + + +PEV Y + D WS G +M+E+
Sbjct: 161 ----------------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 99/268 (36%), Gaps = 86/268 (32%)
Query: 183 LIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-K 241
L+ E++ D L R+ + D+ RFY+ E + A+ H +HRD+KP N+++D +
Sbjct: 111 LVFEHVNNTDFKQL--RQTLTDYDI-RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 242 NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALA 301
+ L+L D+GL ++ P +
Sbjct: 168 HRKLRLIDWGLA----------------------------EFYHPGQEYN---------- 189
Query: 302 YSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPPFCSD------------- 347
V + + PE+L+ + Y D WSLG ++ M+ PF
Sbjct: 190 -VRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 348 -----------------DPRIT------CRKIVNWKTCLKFPEEPKISDEARDLICHLL- 383
DPR RK W+ + + +S EA D + LL
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQWDK 411
D ++RL R E EHP+F + D+
Sbjct: 307 YDHQSRLTAR---EAMEHPYFYTVVKDQ 331
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 133/355 (37%), Gaps = 109/355 (30%)
Query: 106 DDFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQ----VEHVRSERNLLA 161
DD++ + +G+G + EV T E A+K LK + K + +E++R N++
Sbjct: 37 DDYQLVRKLGRGKYSEVFEAINITNNEKVAVKILKPVKKKKIKREIKILENLRGGPNIIT 96
Query: 162 EVD------SRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAES 215
D SR +F ++DF L L++ RFY+ E
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQ----------------TLTDYDIRFYMYEI 140
Query: 216 VLAIHSIHQHNYVHRDIKPDNLILD-KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQE 274
+ A+ H +HRD+KP N+++D ++ L+L D+GL
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA--------------------- 179
Query: 275 TVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAI 333
++ P + + N R V + + PE+L+ + Y D WSLG +
Sbjct: 180 -------EFYHPGQ-----EYNVR------VASRYFKGPELLVDYQMYDYSLDMWSLGCM 221
Query: 334 MYEMLIGYPPFCSD------------------------------DPRIT------CRKIV 357
+ M+ PF DPR RK
Sbjct: 222 LASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRK-- 279
Query: 358 NWKTCLKFPEEPKISDEARDLICHLL-CDVETRLGTRGVEELKEHPWFRGIQWDK 411
W+ + + +S EA D + LL D ++RL R E EHP+F + D+
Sbjct: 280 RWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR---EAMEHPYFYTVVKDQ 331
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 35/119 (29%)
Query: 227 YVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMP 286
+VHRD+ N +LD+ +K++DFGL + + DK + D ++ +T ++ +W
Sbjct: 155 FVHRDLAARNCMLDEKFTVKVADFGLARDMLDK-------EFDSVHNKTGAKLPVKW--- 204
Query: 287 KERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 205 ------------------------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 95/234 (40%), Gaps = 59/234 (25%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G FG V L ++ A+K +++ M + +E E ++ ++ +VQL+
Sbjct: 18 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 72
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI--------HSIHQH 225
+ + L+ E++ G + L + L + AE++L + + +
Sbjct: 73 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL-------FAAETLLGMCLDVCEGMAYLEEA 125
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRD+ N ++ +N +K+SDFG+ + L+D+Y+S
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS---------------------- 163
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ T + + +PEV Y + D WS G +M+E+
Sbjct: 164 ----------------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 201
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 69/259 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-EMLKRGQVEHVRSERNLLAEVD-------S 165
+G+GAFG+V L A + + K + +MLK E + +L++E++
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKH 82
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-----------------REDILSEDVA 208
+ I+ L + LY+I+EY G++ L E + S+D+
Sbjct: 83 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 142
Query: 209 R--FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ +A + + S +HRD+ N+++ ++ +K++DFGL + +
Sbjct: 143 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------- 192
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D + T +W MAPE L + Y + D
Sbjct: 193 --DYYKKTTNGRLPVKW---------------------------MAPEALFDRIYTHQSD 223
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 224 VWSFGVLLWEIFTLGGSPY 242
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/234 (20%), Positives = 95/234 (40%), Gaps = 59/234 (25%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G FG V L ++ A+K +K+ M + +E E ++ ++ +VQL+
Sbjct: 35 IGSGQFGLVHLGYWLNKDKV-AIKTIKEGSMSEDDFIE----EAEVMMKLSHPKLVQLYG 89
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI--------HSIHQH 225
+ + L+ E++ G + L + L + AE++L + + +
Sbjct: 90 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL-------FAAETLLGMCLDVCEGMAYLEEA 142
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRD+ N ++ +N +K+SDFG+ + L+D+Y+S
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS---------------------- 180
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ T + + +PEV Y + D WS G +M+E+
Sbjct: 181 ----------------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 218
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 69/259 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-EMLKRGQVEHVRSERNLLAEVD-------S 165
+G+GAFG+V L A + + K + +MLK E + +L++E++
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKH 86
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-----------------REDILSEDVA 208
+ I+ L + LY+I+EY G++ L E + S+D+
Sbjct: 87 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 146
Query: 209 R--FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ +A + + S +HRD+ N+++ ++ +K++DFGL + +
Sbjct: 147 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------- 196
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D + T +W MAPE L + Y + D
Sbjct: 197 --DYYKKTTNGRLPVKW---------------------------MAPEALFDRIYTHQSD 227
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 228 VWSFGVLLWEIFTLGGSPY 246
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 69/259 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-EMLKRGQVEHVRSERNLLAEVD-------S 165
+G+GAFG+V L A + + K + +MLK E + +L++E++
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKH 78
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-----------------REDILSEDVA 208
+ I+ L + LY+I+EY G++ L E + S+D+
Sbjct: 79 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 138
Query: 209 R--FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ +A + + S +HRD+ N+++ ++ +K++DFGL + +
Sbjct: 139 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------- 188
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D + T +W MAPE L + Y + D
Sbjct: 189 --DYYKKTTNGRLPVKW---------------------------MAPEALFDRIYTHQSD 219
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 220 VWSFGVLLWEIFTLGGSPY 238
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 103/261 (39%), Gaps = 65/261 (24%)
Query: 109 EQLTLI---GKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN------- 158
+ +TLI G GAFGEV G++ M + + V SE++
Sbjct: 30 KNITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 83
Query: 159 --LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF------ 210
++++ + + IV+ S +++ME + GGD+ + L +
Sbjct: 84 ALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 143
Query: 211 YIAESV-LAIHSIHQHNYVHRDIKPDNLILDKNGH---LKLSDFGLCKPLEDKYSSILLE 266
++A + + +++++HRDI N +L G K+ DFG+ + D Y +
Sbjct: 144 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---DIYRA---- 196
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
+ G M+P + +M PE ++ + + D
Sbjct: 197 --------SYYRKGGCAMLP---------------------VKWMPPEAFMEGIFTSKTD 227
Query: 327 WWSLGAIMYEML-IGYPPFCS 346
WS G +++E+ +GY P+ S
Sbjct: 228 TWSFGVLLWEIFSLGYMPYPS 248
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 69/259 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-EMLKRGQVEHVRSERNLLAEVD-------S 165
+G+GAFG+V L A + + K + +MLK E + +L++E++
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKH 85
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-----------------REDILSEDVA 208
+ I+ L + LY+I+EY G++ L E + S+D+
Sbjct: 86 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 145
Query: 209 R--FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ +A + + S +HRD+ N+++ ++ +K++DFGL + +
Sbjct: 146 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------- 195
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D + T +W MAPE L + Y + D
Sbjct: 196 --DYYKKTTNGRLPVKW---------------------------MAPEALFDRIYTHQSD 226
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 227 VWSFGVLLWEIFTLGGSPY 245
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 95/234 (40%), Gaps = 59/234 (25%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G FG V L ++ A+K +++ M + +E E ++ ++ +VQL+
Sbjct: 13 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 67
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI--------HSIHQH 225
+ + L+ E++ G + L + L + AE++L + + +
Sbjct: 68 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL-------FAAETLLGMCLDVCEGMAYLEEA 120
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRD+ N ++ +N +K+SDFG+ + L+D+Y+S
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS---------------------- 158
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ T + + +PEV Y + D WS G +M+E+
Sbjct: 159 ----------------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 95/234 (40%), Gaps = 59/234 (25%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G FG V L ++ A+K +++ M + +E E ++ ++ +VQL+
Sbjct: 15 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 69
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI--------HSIHQH 225
+ + L+ E++ G + L + L + AE++L + + +
Sbjct: 70 VCLEQAPICLVFEFMEHGCLSDYLRTQRGL-------FAAETLLGMCLDVCEGMAYLEEA 122
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRD+ N ++ +N +K+SDFG+ + L+D+Y+S
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS---------------------- 160
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ T + + +PEV Y + D WS G +M+E+
Sbjct: 161 ----------------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 198
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 69/259 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-EMLKRGQVEHVRSERNLLAEVD-------S 165
+G+GAFG+V L A + + K + +MLK E + +L++E++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKH 93
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-----------------REDILSEDVA 208
+ I+ L + LY+I+EY G++ L E + S+D+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 209 R--FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ +A + + S +HRD+ N+++ ++ +K++DFGL + +
Sbjct: 154 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------- 203
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D + T +W MAPE L + Y + D
Sbjct: 204 --DYYKKTTNGRLPVKW---------------------------MAPEALFDRIYTHQSD 234
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPY 253
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/261 (20%), Positives = 103/261 (39%), Gaps = 65/261 (24%)
Query: 109 EQLTLI---GKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN------- 158
+ +TLI G GAFGEV G++ M + + V SE++
Sbjct: 45 KNITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 98
Query: 159 --LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF------ 210
++++ + + IV+ S +++ME + GGD+ + L +
Sbjct: 99 ALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 158
Query: 211 YIAESV-LAIHSIHQHNYVHRDIKPDNLILDKNGH---LKLSDFGLCKPLEDKYSSILLE 266
++A + + +++++HRDI N +L G K+ DFG+ + D Y +
Sbjct: 159 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---DIYRA---- 211
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
+ G M+P + +M PE ++ + + D
Sbjct: 212 --------SYYRKGGCAMLP---------------------VKWMPPEAFMEGIFTSKTD 242
Query: 327 WWSLGAIMYEML-IGYPPFCS 346
WS G +++E+ +GY P+ S
Sbjct: 243 TWSFGVLLWEIFSLGYMPYPS 263
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 102/259 (39%), Gaps = 69/259 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-EMLKRGQVEHVRSERNLLAEVD-------S 165
+G+GAFG+V L A + + K + +MLK E + +L++E++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKH 93
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-----------------REDILSEDVA 208
+ I+ L + LY+I+EY G++ L E + S+D+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLV 153
Query: 209 R--FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ +A + + +HRD+ N+++ ++ +K++DFGL + +
Sbjct: 154 SCAYQVAR---GMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------- 203
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D + T +W MAPE L + Y + D
Sbjct: 204 --DXXKKTTNGRLPVKW---------------------------MAPEALFDRIYTHQSD 234
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPY 253
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 69/259 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-EMLKRGQVEHVRSERNLLAEVD-------S 165
+G+GAFG+V L A + + K + +MLK E + +L++E++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKH 93
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-----------------REDILSEDVA 208
+ I+ L + LY+I+EY G++ L E + S+D+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLV 153
Query: 209 R--FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ +A + + S +HRD+ N+++ ++ +K++DFGL + +
Sbjct: 154 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------- 203
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D + T +W MAPE L + Y + D
Sbjct: 204 --DYYKKTTNGRLPVKW---------------------------MAPEALFDRIYTHQSD 234
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPY 253
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 89/231 (38%), Gaps = 59/231 (25%)
Query: 135 AMKKLK-KSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDI 193
A+K LK K+E R E R E L A + +V L L +I Y GD+
Sbjct: 43 AIKTLKDKAEGPLR---EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 99
Query: 194 MTLLM----REDILSEDVAR------------FYIAESVLAIHSIHQHNYVHRDIKPDNL 237
L+ D+ S D R +A+ + + H+ VH+D+ N+
Sbjct: 100 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNV 159
Query: 238 ILDKNGHLKLSDFGLCKPL-EDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRN 296
++ ++K+SD GL + + Y +L G ++P
Sbjct: 160 LVYDKLNVKISDLGLFREVYAADYYKLL----------------GNSLLP---------- 193
Query: 297 RRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML-IGYPPFCS 346
+ +MAPE ++ + ++ D WS G +++E+ G P+C
Sbjct: 194 -----------IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCG 233
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 95/234 (40%), Gaps = 59/234 (25%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFY 173
IG G FG V L ++ A+K +++ M + +E E ++ ++ +VQL+
Sbjct: 16 IGSGQFGLVHLGYWLNKDKV-AIKTIREGAMSEEDFIE----EAEVMMKLSHPKLVQLYG 70
Query: 174 SFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAI--------HSIHQH 225
+ + L+ E++ G + L + L + AE++L + + +
Sbjct: 71 VCLEQAPICLVTEFMEHGCLSDYLRTQRGL-------FAAETLLGMCLDVCEGMAYLEEA 123
Query: 226 NYVHRDIKPDNLILDKNGHLKLSDFGLCK-PLEDKYSSILLEDEDIINQETVSEAEGQWM 284
+HRD+ N ++ +N +K+SDFG+ + L+D+Y+S
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS---------------------- 161
Query: 285 MPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML 338
+ T + + +PEV Y + D WS G +M+E+
Sbjct: 162 ----------------STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 199
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 98/258 (37%), Gaps = 67/258 (25%)
Query: 114 IGKGAFGEVRLCRAKTTGEI-------FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
+G GAFG+V A G I A+K LK S L + E + SE +L+ + +
Sbjct: 47 LGAGAFGKV--VEATAYGLIKSDAAMTVAVKMLKPSAHLT--EREALMSELKVLSYLGNH 102
Query: 167 C-IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED---ILSEDVARF------------ 210
IV L + +I EY GD++ L R+ I S+
Sbjct: 103 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 162
Query: 211 ---YIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
+ + + + N +HRD+ N++L K+ DFGL + +++ + ++
Sbjct: 163 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV--- 219
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDW 327
+G +P + +MAPE + Y E D
Sbjct: 220 ------------KGNARLP---------------------VKWMAPESIFNCVYTFESDV 246
Query: 328 WSLGAIMYEML-IGYPPF 344
WS G ++E+ +G P+
Sbjct: 247 WSYGIFLWELFSLGSSPY 264
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 62/147 (42%), Gaps = 38/147 (25%)
Query: 199 REDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLED 258
+E I ED+ Y + + + +HRD+ N++L +N +K+ DFGL + D
Sbjct: 193 KEPITMEDLIS-YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLAR---D 248
Query: 259 KYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLK 318
Y ++ D + + G +P L +MAPE +
Sbjct: 249 IY-----KNPDYVRK-------GDTRLP---------------------LKWMAPESIFD 275
Query: 319 KGYGMECDWWSLGAIMYEML-IGYPPF 344
K Y + D WS G +++E+ +G P+
Sbjct: 276 KIYSTKSDVWSYGVLLWEIFSLGGSPY 302
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 72/165 (43%), Gaps = 38/165 (23%)
Query: 183 LIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD 240
+++ Y+ GD+ + E + +D+ F + + + + +VHRD+ N +LD
Sbjct: 108 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLD 166
Query: 241 KNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRAL 300
+ +K++DFGL + + DK + ++ +T ++ +W
Sbjct: 167 EKFTVKVADFGLARDMYDK-------EXXSVHNKTGAKLPVKW----------------- 202
Query: 301 AYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 203 ----------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 59/230 (25%)
Query: 135 AMKKLK-KSEMLKRGQVEHVRSERNLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDI 193
A+K LK K+E R E R E L A + +V L L +I Y GD+
Sbjct: 60 AIKTLKDKAEGPLR---EEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDL 116
Query: 194 MTLLM----REDILSEDVAR------------FYIAESVLAIHSIHQHNYVHRDIKPDNL 237
L+ D+ S D R +A+ + + H+ VH+D+ N+
Sbjct: 117 HEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNV 176
Query: 238 ILDKNGHLKLSDFGLCKPL-EDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRN 296
++ ++K+SD GL + + Y +L G ++P
Sbjct: 177 LVYDKLNVKISDLGLFREVYAADYYKLL----------------GNSLLP---------- 210
Query: 297 RRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML-IGYPPFC 345
+ +MAPE ++ + ++ D WS G +++E+ G P+C
Sbjct: 211 -----------IRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC 249
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 69/259 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-EMLKRGQVEHVRSERNLLAEVD-------S 165
+G+GAFG+V L A + + K + +MLK E + +L++E++
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKH 93
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-----------------REDILSEDVA 208
+ I+ L + LY+I+EY G++ L E + S+D+
Sbjct: 94 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLV 153
Query: 209 R--FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ +A + + S +HRD+ N+++ ++ +K++DFGL + +
Sbjct: 154 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------- 203
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D + T +W MAPE L + Y + D
Sbjct: 204 --DYYKKTTNGRLPVKW---------------------------MAPEALFDRIYTHQSD 234
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 235 VWSFGVLLWEIFTLGGSPY 253
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 100/268 (37%), Gaps = 86/268 (32%)
Query: 183 LIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-K 241
L+ E++ D L L++ RFY+ E + A+ H +HRD+KP N+++D +
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 242 NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALA 301
+ L+L D+GL ++ P + + N R
Sbjct: 168 HRKLRLIDWGLA----------------------------EFYHPGQ-----EYNVR--- 191
Query: 302 YSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPPFCSD------------- 347
V + + PE+L+ + Y D WSLG ++ M+ PF
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 348 -----------------DPRIT------CRKIVNWKTCLKFPEEPKISDEARDLICHLL- 383
DPR RK W+ + + +S EA D + LL
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQWDK 411
D ++RL R E EHP+F + D+
Sbjct: 307 YDHQSRLTAR---EAMEHPYFYTVVKDQ 331
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/259 (20%), Positives = 103/259 (39%), Gaps = 69/259 (26%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKS-EMLKRGQVEHVRSERNLLAEVD-------S 165
+G+GAFG+V L A + + K + +MLK E + +L++E++
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATE--KDLSDLISEMEMMKMIGKH 134
Query: 166 RCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLM-----------------REDILSEDVA 208
+ I+ L + LY+I+EY G++ L E + S+D+
Sbjct: 135 KNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLV 194
Query: 209 R--FYIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLE 266
+ +A + + S +HRD+ N+++ ++ +K++DFGL + +
Sbjct: 195 SCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHI------- 244
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
D + T +W MAPE L + Y + D
Sbjct: 245 --DYYKKTTNGRLPVKW---------------------------MAPEALFDRIYTHQSD 275
Query: 327 WWSLGAIMYEML-IGYPPF 344
WS G +++E+ +G P+
Sbjct: 276 VWSFGVLLWEIFTLGGSPY 294
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 100/268 (37%), Gaps = 86/268 (32%)
Query: 183 LIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-K 241
L+ E++ D L L++ RFY+ E + A+ H +HRD+KP N+++D +
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 242 NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALA 301
+ L+L D+GL ++ P + + N R
Sbjct: 168 HRKLRLIDWGLA----------------------------EFYHPGQ-----EYNVR--- 191
Query: 302 YSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPPFCSD------------- 347
V + + PE+L+ + Y D WSLG ++ M+ PF
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 348 -----------------DPRIT------CRKIVNWKTCLKFPEEPKISDEARDLICHLL- 383
DPR RK W+ + + +S EA D + LL
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQWDK 411
D ++RL R E EHP+F + D+
Sbjct: 307 YDHQSRLTAR---EAMEHPYFYTVVKDQ 331
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 100/268 (37%), Gaps = 86/268 (32%)
Query: 183 LIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-K 241
L+ E++ D L L++ RFY+ E + A+ H +HRD+KP N+++D +
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 242 NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALA 301
+ L+L D+GL ++ P + + N R
Sbjct: 168 HRKLRLIDWGLA----------------------------EFYHPGQ-----EYNVR--- 191
Query: 302 YSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPPFCSD------------- 347
V + + PE+L+ + Y D WSLG ++ M+ PF
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 348 -----------------DPRIT------CRKIVNWKTCLKFPEEPKISDEARDLICHLL- 383
DPR RK W+ + + +S EA D + LL
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQWDK 411
D ++RL R E EHP+F + D+
Sbjct: 307 YDHQSRLTAR---EAMEHPYFYTVVKDQ 331
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 98/258 (37%), Gaps = 67/258 (25%)
Query: 114 IGKGAFGEVRLCRAKTTGEI-------FAMKKLKKSEMLKRGQVEHVRSERNLLAEVDSR 166
+G GAFG+V A G I A+K LK S L + E + SE +L+ + +
Sbjct: 31 LGAGAFGKV--VEATAYGLIKSDAAMTVAVKMLKPSAHLT--EREALMSELKVLSYLGNH 86
Query: 167 C-IVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMRED---ILSEDVARF------------ 210
IV L + +I EY GD++ L R+ I S+
Sbjct: 87 MNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLED 146
Query: 211 ---YIAESVLAIHSIHQHNYVHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLED 267
+ + + + N +HRD+ N++L K+ DFGL + +++ + ++
Sbjct: 147 LLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVV--- 203
Query: 268 EDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDW 327
+G +P + +MAPE + Y E D
Sbjct: 204 ------------KGNARLP---------------------VKWMAPESIFNCVYTFESDV 230
Query: 328 WSLGAIMYEML-IGYPPF 344
WS G ++E+ +G P+
Sbjct: 231 WSYGIFLWELFSLGSSPY 248
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/261 (19%), Positives = 104/261 (39%), Gaps = 65/261 (24%)
Query: 109 EQLTLI---GKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERN------- 158
+ +TLI G GAFGEV G++ M + + V SE++
Sbjct: 31 KNITLIRGLGHGAFGEVY------EGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLME 84
Query: 159 --LLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARF------ 210
++++++ + IV+ S ++++E + GGD+ + L +
Sbjct: 85 ALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLL 144
Query: 211 YIAESV-LAIHSIHQHNYVHRDIKPDNLILDKNGH---LKLSDFGLCKPLEDKYSSILLE 266
++A + + +++++HRDI N +L G K+ DFG+ + D Y
Sbjct: 145 HVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR---DIY------ 195
Query: 267 DEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECD 326
+ + G M+P + +M PE ++ + + D
Sbjct: 196 ------RASYYRKGGCAMLP---------------------VKWMPPEAFMEGIFTSKTD 228
Query: 327 WWSLGAIMYEML-IGYPPFCS 346
WS G +++E+ +GY P+ S
Sbjct: 229 TWSFGVLLWEIFSLGYMPYPS 249
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 100/268 (37%), Gaps = 86/268 (32%)
Query: 183 LIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-K 241
L+ E++ D L L++ RFY+ E + A+ H +HRD+KP N+++D +
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 242 NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALA 301
+ L+L D+GL ++ P + + N R
Sbjct: 168 HRKLRLIDWGLA----------------------------EFYHPGQ-----EYNVR--- 191
Query: 302 YSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPPFCSD------------- 347
V + + PE+L+ + Y D WSLG ++ M+ PF
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 348 -----------------DPRIT------CRKIVNWKTCLKFPEEPKISDEARDLICHLL- 383
DPR RK W+ + + +S EA D + LL
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQWDK 411
D ++RL R E EHP+F + D+
Sbjct: 307 YDHQSRLTAR---EAMEHPYFYTVVKDQ 331
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 40/166 (24%)
Query: 183 LIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD 240
+++ Y+ GD+ + E + +D+ F + + + + +VHRD+ N +LD
Sbjct: 101 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLD 159
Query: 241 KNGHLKLSDFGLCKPLEDK-YSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRA 299
+ +K++DFGL + + DK Y S ++ +T ++ +W
Sbjct: 160 EKFTVKVADFGLARDMYDKEYYS--------VHNKTGAKLPVKW---------------- 195
Query: 300 LAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 196 -----------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 100/268 (37%), Gaps = 86/268 (32%)
Query: 183 LIMEYLPGGDIMTLLMREDILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD-K 241
L+ E++ D L L++ RFY+ E + A+ H +HRD+KP N+++D +
Sbjct: 111 LVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHE 167
Query: 242 NGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALA 301
+ L+L D+GL ++ P + + N R
Sbjct: 168 HRKLRLIDWGLA----------------------------EFYHPGQ-----EYNVR--- 191
Query: 302 YSTVGTLDYMAPEVLLK-KGYGMECDWWSLGAIMYEMLIGYPPFCSD------------- 347
V + + PE+L+ + Y D WSLG ++ M+ PF
Sbjct: 192 ---VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 348 -----------------DPRIT------CRKIVNWKTCLKFPEEPKISDEARDLICHLL- 383
DPR RK W+ + + +S EA D + LL
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRK--RWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 384 CDVETRLGTRGVEELKEHPWFRGIQWDK 411
D ++RL R E EHP+F + D+
Sbjct: 307 YDHQSRLTAR---EAMEHPYFYTVVKDQ 331
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 99/259 (38%), Gaps = 79/259 (30%)
Query: 107 DFEQLTLIGKGAFGEVRLCRAKTTGEIFAMKKL---------KKSEMLKRGQVEHVRSER 157
D L +GKG +GEV R GE A+K +++E+ + H
Sbjct: 9 DITLLECVGKGRYGEV--WRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRH----E 62
Query: 158 NLLAEVDSRCIVQLFYSFQDSDFLYLIMEYLPGGDIMTLLMREDILSEDVARFYIAESVL 217
N+L + S S S L+LI Y G + L + + R VL
Sbjct: 63 NILGFIASD-----MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRI-----VL 112
Query: 218 AIHSIHQHNYV------------HRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILL 265
+I S H ++ HRD+K N+++ KNG ++D GL
Sbjct: 113 SIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA------------ 160
Query: 266 EDEDIINQETVSEAEGQWMMPKERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMEC 325
+++ ++ ++ + N R VGT YMAPEV L + ++C
Sbjct: 161 ----VMHSQSTNQLDV------------GNNPR------VGTKRYMAPEV-LDETIQVDC 197
Query: 326 -------DWWSLGAIMYEM 337
D W+ G +++E+
Sbjct: 198 FDSYKRVDIWAFGLVLWEV 216
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 37/118 (31%)
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRD+ N++L + +K+ DFGL + D Y +D D + + G +P
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLAR---DIY-----KDPDYVRK-------GDARLP- 256
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML-IGYPPF 344
L +MAPE + + Y ++ D WS G +++E+ +G P+
Sbjct: 257 --------------------LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 294
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 18/151 (11%)
Query: 114 IGKGAFGEVRLCRAKTTGEIFAMKKLKKSEMLKRGQVEHVRSERNLLAEVDS--RCIVQL 171
IG G FGE+RL + T E A+K E +K + + E ++ S + Q+
Sbjct: 8 IGCGNFGELRLGKNLYTNEYVAIK----LEPIK-SRAPQLHLEYRFYKQLGSAGEGLPQV 62
Query: 172 FYSFQDSDFLYLIMEYLPGG--DIMTLLMREDILSEDVARFYIAESVLA-IHSIHQHNYV 228
+Y + +++E L D+ L R L + IA +L+ + +H N +
Sbjct: 63 YYFGPXGKYNAMVLELLGPSLEDLFDLCDRTFTLKTVLM---IAIQLLSRMEYVHSKNLI 119
Query: 229 HRDIKPDNLILDKNGHLK-----LSDFGLCK 254
+RD+KP+N ++ + G+ K + DFGL K
Sbjct: 120 YRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 40/166 (24%)
Query: 183 LIMEYLPGGDIMTLLMRE--DILSEDVARFYIAESVLAIHSIHQHNYVHRDIKPDNLILD 240
+++ Y+ GD+ + E + +D+ F + + + + +VHRD+ N +LD
Sbjct: 109 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGL-QVAKGMKYLASKKFVHRDLAARNCMLD 167
Query: 241 KNGHLKLSDFGLCKPLEDK-YSSILLEDEDIINQETVSEAEGQWMMPKERLQQWKRNRRA 299
+ +K++DFGL + + DK Y S ++ +T ++ +W
Sbjct: 168 EKFTVKVADFGLARDMYDKEYYS--------VHNKTGAKLPVKW---------------- 203
Query: 300 LAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLI-GYPPF 344
MA E L + + + D WS G +++E++ G PP+
Sbjct: 204 -----------MALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 37/118 (31%)
Query: 228 VHRDIKPDNLILDKNGHLKLSDFGLCKPLEDKYSSILLEDEDIINQETVSEAEGQWMMPK 287
+HRD+ N++L + +K+ DFGL + D Y +D D + + G +P
Sbjct: 215 IHRDLAARNILLSEKNVVKICDFGLAR---DIY-----KDPDYVRK-------GDARLP- 258
Query: 288 ERLQQWKRNRRALAYSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEML-IGYPPF 344
L +MAPE + + Y ++ D WS G +++E+ +G P+
Sbjct: 259 --------------------LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 296
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,562,595
Number of Sequences: 62578
Number of extensions: 661358
Number of successful extensions: 4703
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 1537
Number of HSP's gapped (non-prelim): 2075
length of query: 518
length of database: 14,973,337
effective HSP length: 103
effective length of query: 415
effective length of database: 8,527,803
effective search space: 3539038245
effective search space used: 3539038245
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)