Query 010123
Match_columns 517
No_of_seqs 365 out of 2567
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 20:24:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010123.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010123hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lhh_A CBS domain protein; str 99.9 1.2E-27 4.3E-32 222.1 13.1 140 182-327 4-144 (172)
2 3oi8_A Uncharacterized protein 99.9 6.7E-26 2.3E-30 206.9 14.3 138 184-327 2-140 (156)
3 3ocm_A Putative membrane prote 99.9 2.4E-25 8.3E-30 208.0 14.4 124 201-327 13-137 (173)
4 3lv9_A Putative transporter; C 99.9 2.7E-24 9.1E-29 193.7 12.6 123 203-327 2-125 (148)
5 3oco_A Hemolysin-like protein 99.9 3.3E-24 1.1E-28 194.7 7.7 120 206-327 2-123 (153)
6 3lfr_A Putative metal ION tran 99.9 6.1E-22 2.1E-26 176.4 11.0 103 223-327 2-107 (136)
7 3jtf_A Magnesium and cobalt ef 99.9 1.9E-21 6.5E-26 171.4 13.6 105 221-327 2-106 (129)
8 3hf7_A Uncharacterized CBS-dom 99.9 2.1E-21 7.2E-26 171.8 10.9 103 223-327 1-107 (130)
9 3k6e_A CBS domain protein; str 99.8 2.8E-21 9.5E-26 177.5 11.9 110 214-327 4-122 (156)
10 3kxr_A Magnesium transporter, 99.8 2.5E-20 8.4E-25 179.0 17.2 127 185-327 25-154 (205)
11 3i8n_A Uncharacterized protein 99.8 2.4E-21 8.4E-26 170.7 9.4 106 220-327 2-109 (130)
12 3nqr_A Magnesium and cobalt ef 99.8 1.3E-20 4.4E-25 165.4 11.9 104 222-327 1-106 (127)
13 4esy_A CBS domain containing m 99.8 4.2E-20 1.4E-24 170.5 13.2 111 211-327 7-143 (170)
14 2yvy_A MGTE, Mg2+ transporter 99.8 3.9E-19 1.3E-23 177.7 14.4 117 205-327 116-237 (278)
15 2zy9_A Mg2+ transporter MGTE; 99.8 1.1E-18 3.7E-23 187.8 16.3 134 184-327 110-257 (473)
16 2oux_A Magnesium transporter; 99.7 1.2E-17 4E-22 168.1 15.7 116 206-327 119-239 (286)
17 4gqw_A CBS domain-containing p 99.7 8.4E-18 2.9E-22 150.0 12.9 104 222-327 3-123 (152)
18 3ctu_A CBS domain protein; str 99.7 5E-18 1.7E-22 153.6 11.3 109 215-327 6-122 (156)
19 3kpb_A Uncharacterized protein 99.7 9.1E-18 3.1E-22 145.1 10.9 100 224-327 1-100 (122)
20 3lqn_A CBS domain protein; csg 99.7 8.5E-18 2.9E-22 150.9 10.7 106 218-327 9-123 (150)
21 2emq_A Hypothetical conserved 99.7 1.9E-17 6.3E-22 149.6 12.6 108 216-327 3-119 (157)
22 3k2v_A Putative D-arabinose 5- 99.7 1.8E-17 6.3E-22 149.2 10.6 102 224-327 28-133 (149)
23 3sl7_A CBS domain-containing p 99.7 2.1E-17 7.2E-22 152.1 11.1 103 223-327 3-136 (180)
24 2rc3_A CBS domain; in SITU pro 99.7 4.8E-17 1.6E-21 143.4 13.0 100 225-327 7-112 (135)
25 2ef7_A Hypothetical protein ST 99.7 5.5E-17 1.9E-21 142.4 13.2 102 221-327 1-105 (133)
26 3fhm_A Uncharacterized protein 99.7 4.5E-17 1.5E-21 149.3 12.2 110 216-327 16-131 (165)
27 3gby_A Uncharacterized protein 99.7 6.3E-17 2.1E-21 141.8 12.4 101 222-327 3-106 (128)
28 2yzi_A Hypothetical protein PH 99.7 1.3E-16 4.3E-21 141.0 14.2 104 219-327 2-109 (138)
29 2rih_A Conserved protein with 99.7 1.1E-16 3.7E-21 142.4 11.8 99 224-327 5-108 (141)
30 4fry_A Putative signal-transdu 99.7 1.7E-16 5.8E-21 143.6 13.3 101 224-327 7-116 (157)
31 2qrd_G Protein C1556.08C; AMPK 99.7 7.6E-17 2.6E-21 163.3 12.2 123 206-329 3-149 (334)
32 1yav_A Hypothetical protein BS 99.7 8.2E-17 2.8E-21 146.3 10.8 104 220-327 10-122 (159)
33 2p9m_A Hypothetical protein MJ 99.7 1.8E-16 6.3E-21 139.7 12.5 103 221-327 5-116 (138)
34 3fv6_A YQZB protein; CBS domai 99.7 3E-16 1E-20 142.9 13.8 102 221-327 14-121 (159)
35 2v8q_E 5'-AMP-activated protei 99.7 5.1E-17 1.7E-21 164.5 9.2 123 202-327 15-156 (330)
36 1o50_A CBS domain-containing p 99.7 3.1E-16 1.1E-20 142.3 13.0 102 220-327 12-133 (157)
37 1pbj_A Hypothetical protein; s 99.7 2.5E-16 8.6E-21 136.3 11.6 99 224-327 1-103 (125)
38 2nyc_A Nuclear protein SNF4; b 99.7 3.1E-16 1.1E-20 138.8 11.9 104 220-327 4-121 (144)
39 2pfi_A Chloride channel protei 99.7 2.9E-16 1E-20 142.2 11.7 110 215-327 4-128 (164)
40 2j9l_A Chloride channel protei 99.7 2.6E-16 9E-21 145.5 11.3 106 221-327 8-146 (185)
41 1y5h_A Hypothetical protein RV 99.7 1.8E-16 6.3E-21 139.1 9.8 103 221-327 5-112 (133)
42 2o16_A Acetoin utilization pro 99.7 3.7E-16 1.3E-20 142.6 12.1 102 222-327 3-116 (160)
43 1pvm_A Conserved hypothetical 99.6 5.3E-16 1.8E-20 144.8 11.5 100 224-327 9-113 (184)
44 3t4n_C Nuclear protein SNF4; C 99.6 1.6E-16 5.4E-21 160.2 8.2 125 203-328 8-153 (323)
45 2uv4_A 5'-AMP-activated protei 99.6 7.6E-16 2.6E-20 139.0 11.8 101 221-327 20-131 (152)
46 3kh5_A Protein MJ1225; AMPK, A 99.6 2.2E-15 7.7E-20 147.6 11.0 133 184-327 51-186 (280)
47 3ddj_A CBS domain-containing p 99.6 5.6E-15 1.9E-19 147.0 13.0 129 184-327 64-194 (296)
48 1zfj_A Inosine monophosphate d 99.6 6.6E-15 2.2E-19 158.6 14.3 131 184-327 54-191 (491)
49 1vr9_A CBS domain protein/ACT 99.6 1.4E-14 4.6E-19 139.2 14.5 99 223-327 12-110 (213)
50 3org_A CMCLC; transporter, tra 99.6 4.7E-16 1.6E-20 172.8 4.7 104 222-327 451-606 (632)
51 3t4n_C Nuclear protein SNF4; C 99.6 1.2E-14 4E-19 146.5 13.2 104 220-327 183-300 (323)
52 3usb_A Inosine-5'-monophosphat 99.6 1.6E-14 5.4E-19 156.8 13.8 132 183-328 76-215 (511)
53 3ddj_A CBS domain-containing p 99.6 1.2E-14 4.2E-19 144.5 11.4 103 221-327 153-265 (296)
54 3kh5_A Protein MJ1225; AMPK, A 99.5 3.5E-14 1.2E-18 139.1 13.9 100 225-327 4-122 (280)
55 4fxs_A Inosine-5'-monophosphat 99.5 2.1E-15 7.3E-20 163.0 4.6 142 183-338 52-200 (496)
56 3l2b_A Probable manganase-depe 99.5 1.9E-14 6.5E-19 140.2 10.5 101 223-327 6-224 (245)
57 3pc3_A CG1753, isoform A; CBS, 99.5 1.9E-14 6.4E-19 156.6 11.0 103 221-328 381-488 (527)
58 2yzq_A Putative uncharacterize 99.5 6.9E-14 2.4E-18 137.5 12.7 102 222-327 124-259 (282)
59 2d4z_A Chloride channel protei 99.5 1E-13 3.6E-18 137.3 12.5 60 220-282 9-69 (250)
60 2yzq_A Putative uncharacterize 99.5 3.4E-14 1.2E-18 139.7 8.5 99 224-328 1-99 (282)
61 1me8_A Inosine-5'-monophosphat 99.5 7.1E-15 2.4E-19 159.2 2.0 144 184-336 61-210 (503)
62 2qrd_G Protein C1556.08C; AMPK 99.5 3E-13 1E-17 136.8 13.3 102 222-327 180-295 (334)
63 2cu0_A Inosine-5'-monophosphat 99.4 1.2E-14 4.1E-19 156.7 1.9 136 184-336 57-197 (486)
64 4avf_A Inosine-5'-monophosphat 99.4 1.8E-14 6.1E-19 155.6 1.3 140 183-337 51-197 (490)
65 2v8q_E 5'-AMP-activated protei 99.4 9.4E-13 3.2E-17 133.1 12.9 102 223-327 189-303 (330)
66 1vrd_A Inosine-5'-monophosphat 99.3 8.2E-13 2.8E-17 142.5 1.8 120 207-336 82-204 (494)
67 4af0_A Inosine-5'-monophosphat 99.1 1.6E-11 5.4E-16 132.0 1.3 120 210-339 129-250 (556)
68 1jcn_A Inosine monophosphate d 99.1 3E-12 1E-16 138.9 -5.6 110 224-336 108-222 (514)
69 3ghd_A A cystathionine beta-sy 98.7 4.7E-08 1.6E-12 77.9 7.6 65 235-302 1-70 (70)
70 3fio_A A cystathionine beta-sy 98.5 2.6E-07 8.8E-12 71.8 7.6 64 236-302 2-70 (70)
71 1vr9_A CBS domain protein/ACT 98.5 8.5E-08 2.9E-12 91.6 5.8 103 223-330 71-174 (213)
72 4esy_A CBS domain containing m 98.2 8E-07 2.8E-11 81.2 4.8 40 288-327 17-56 (170)
73 4fry_A Putative signal-transdu 98.1 4.2E-06 1.4E-10 74.9 6.5 61 221-286 75-135 (157)
74 3l2b_A Probable manganase-depe 98.1 7.4E-06 2.5E-10 79.1 8.4 40 288-327 6-45 (245)
75 3ghd_A A cystathionine beta-sy 98.0 8.6E-06 2.9E-10 64.6 6.6 29 299-327 2-30 (70)
76 3fv6_A YQZB protein; CBS domai 98.0 7.6E-06 2.6E-10 73.7 6.5 64 220-285 77-143 (159)
77 3kpb_A Uncharacterized protein 98.0 9.5E-06 3.3E-10 69.0 6.8 59 223-285 61-119 (122)
78 3fio_A A cystathionine beta-sy 97.9 1.9E-05 6.4E-10 61.0 6.9 30 298-327 1-30 (70)
79 3lv9_A Putative transporter; C 97.9 1.6E-05 5.3E-10 70.5 7.3 40 288-327 22-63 (148)
80 2yzi_A Hypothetical protein PH 97.9 1.7E-05 5.9E-10 69.0 7.3 40 288-327 6-45 (138)
81 2ef7_A Hypothetical protein ST 97.9 9.2E-06 3.1E-10 70.3 5.4 59 223-285 66-124 (133)
82 3gby_A Uncharacterized protein 97.9 1.3E-05 4.4E-10 69.3 6.2 40 288-327 4-43 (128)
83 3k2v_A Putative D-arabinose 5- 97.9 1.7E-05 5.9E-10 70.4 7.2 39 289-327 28-68 (149)
84 2rc3_A CBS domain; in SITU pro 97.9 1.8E-05 6.2E-10 68.7 7.0 60 221-285 71-130 (135)
85 2o16_A Acetoin utilization pro 97.9 2E-05 6.9E-10 71.0 7.6 40 288-327 4-43 (160)
86 3ctu_A CBS domain protein; str 97.9 1.8E-05 6.2E-10 70.6 6.7 39 289-327 15-55 (156)
87 4gqw_A CBS domain-containing p 97.9 1E-05 3.5E-10 71.2 5.0 61 221-285 82-142 (152)
88 1pbj_A Hypothetical protein; s 97.9 2.1E-05 7.2E-10 67.0 6.7 61 220-285 61-121 (125)
89 3lfr_A Putative metal ION tran 97.9 2E-05 7E-10 69.0 6.5 60 221-285 67-126 (136)
90 2p9m_A Hypothetical protein MJ 97.8 3.1E-05 1.1E-09 67.2 7.5 40 288-327 7-46 (138)
91 1pvm_A Conserved hypothetical 97.8 3.3E-05 1.1E-09 71.2 8.0 61 221-285 72-132 (184)
92 2rih_A Conserved protein with 97.8 2.7E-05 9.2E-10 68.3 7.0 39 289-327 5-43 (141)
93 3lhh_A CBS domain protein; str 97.8 4.5E-05 1.5E-09 69.8 8.5 59 222-285 105-163 (172)
94 3lqn_A CBS domain protein; csg 97.8 2.2E-05 7.5E-10 69.5 6.2 40 288-327 14-55 (150)
95 3jtf_A Magnesium and cobalt ef 97.8 2.6E-05 9E-10 67.6 6.4 58 222-284 67-124 (129)
96 1o50_A CBS domain-containing p 97.8 2.3E-05 7.7E-10 70.3 6.1 61 220-285 92-152 (157)
97 3fhm_A Uncharacterized protein 97.8 3.4E-05 1.2E-09 69.7 7.2 61 220-285 89-149 (165)
98 3oco_A Hemolysin-like protein 97.8 3.6E-05 1.2E-09 68.7 7.2 58 223-285 85-142 (153)
99 3sl7_A CBS domain-containing p 97.8 2E-05 7E-10 71.5 5.6 61 220-284 94-154 (180)
100 2emq_A Hypothetical conserved 97.8 3.4E-05 1.2E-09 68.6 6.8 40 288-327 10-51 (157)
101 2pfi_A Chloride channel protei 97.8 3.7E-05 1.3E-09 68.6 7.0 40 288-327 12-51 (164)
102 2nyc_A Nuclear protein SNF4; b 97.8 5.3E-05 1.8E-09 66.0 7.7 40 288-327 7-49 (144)
103 2uv4_A 5'-AMP-activated protei 97.8 2.9E-05 1E-09 69.1 6.0 60 223-284 86-149 (152)
104 1y5h_A Hypothetical protein RV 97.7 2.4E-05 8.3E-10 67.6 5.1 59 221-284 71-129 (133)
105 3nqr_A Magnesium and cobalt ef 97.7 3.2E-05 1.1E-09 66.8 5.8 58 222-284 67-124 (127)
106 1yav_A Hypothetical protein BS 97.7 3.2E-05 1.1E-09 69.3 6.0 40 288-327 13-54 (159)
107 3i8n_A Uncharacterized protein 97.7 4.9E-05 1.7E-09 65.8 6.9 58 222-284 70-127 (130)
108 3k6e_A CBS domain protein; str 97.7 4.8E-05 1.6E-09 68.9 7.0 38 290-327 16-55 (156)
109 3hf7_A Uncharacterized CBS-dom 97.7 4.1E-05 1.4E-09 66.6 6.3 58 222-284 68-125 (130)
110 2d4z_A Chloride channel protei 97.7 5.4E-05 1.8E-09 74.6 7.4 40 288-327 12-51 (250)
111 3usb_A Inosine-5'-monophosphat 97.7 9.1E-05 3.1E-09 80.2 9.3 112 221-336 172-285 (511)
112 3oi8_A Uncharacterized protein 97.7 4.2E-05 1.4E-09 68.7 5.6 55 222-281 101-155 (156)
113 3kxr_A Magnesium transporter, 97.7 4.9E-05 1.7E-09 72.2 6.1 61 221-285 113-173 (205)
114 1me8_A Inosine-5'-monophosphat 97.6 2.4E-05 8.3E-10 84.5 3.9 100 222-325 159-260 (503)
115 2j9l_A Chloride channel protei 97.6 7.7E-05 2.6E-09 68.0 6.6 40 288-327 10-55 (185)
116 3ocm_A Putative membrane prote 97.6 0.00011 3.7E-09 67.7 6.9 41 287-327 34-76 (173)
117 2yvy_A MGTE, Mg2+ transporter 97.4 0.00015 5.2E-09 71.7 5.6 61 221-285 196-256 (278)
118 2oux_A Magnesium transporter; 97.3 0.00019 6.5E-09 71.6 4.9 61 221-285 198-258 (286)
119 3pc3_A CG1753, isoform A; CBS, 97.3 0.0003 1E-08 76.2 6.8 40 288-327 383-423 (527)
120 3org_A CMCLC; transporter, tra 97.1 0.00039 1.3E-08 77.1 5.4 56 225-285 569-624 (632)
121 2zy9_A Mg2+ transporter MGTE; 97.0 0.00053 1.8E-08 73.4 5.7 61 221-285 216-276 (473)
122 4avf_A Inosine-5'-monophosphat 96.9 0.00051 1.8E-08 73.9 4.6 101 222-327 145-248 (490)
123 1vrd_A Inosine-5'-monophosphat 96.9 0.00053 1.8E-08 73.6 4.1 101 222-325 153-255 (494)
124 4fxs_A Inosine-5'-monophosphat 96.7 0.00068 2.3E-08 73.1 3.7 61 222-284 147-207 (496)
125 2cu0_A Inosine-5'-monophosphat 96.6 0.0011 3.8E-08 71.1 3.8 107 222-336 148-257 (486)
126 1zfj_A Inosine monophosphate d 96.5 0.0088 3E-07 63.9 10.2 101 222-327 150-252 (491)
127 1jcn_A Inosine monophosphate d 96.4 0.0011 3.8E-08 71.5 3.0 98 222-323 171-271 (514)
128 4af0_A Inosine-5'-monophosphat 96.3 0.0016 5.6E-08 70.3 3.3 99 222-327 198-300 (556)
No 1
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.95 E-value=1.2e-27 Score=222.14 Aligned_cols=140 Identities=24% Similarity=0.438 Sum_probs=93.7
Q ss_pred CccccHHHHHHHHHhhhhhcccCCCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEE
Q 010123 182 DALFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRV 261 (517)
Q Consensus 182 ~~~~s~eEL~~lv~~~~~e~~~~G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~ 261 (517)
.+.+|++||+.+++ ++.+.|.++++|+++++++++|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++
T Consensus 4 ~~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~ 78 (172)
T 3lhh_A 4 DDNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRF 78 (172)
T ss_dssp -------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEE
T ss_pred cccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEE
Confidence 46789999999998 45567999999999999999999999999999988999999999999 99999999999999
Q ss_pred EEEeCCCCCEEEEEEhhhHhcccccC-CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 262 PIYSGNPKNIIGLLLVKSLLTVRAET-ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 262 PV~ddd~d~iVGiV~~kDLl~~~~~~-~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
||++++.++++|+|+.+|++...... +.+++++| +++++|++++++.++++.|.+++.+++||+|
T Consensus 79 pVvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd 144 (172)
T 3lhh_A 79 PVCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVD 144 (172)
T ss_dssp EEESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEEC
T ss_pred EEEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEe
Confidence 99986547999999999999765433 57899998 9999999999999999999999999999999
No 2
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.93 E-value=6.7e-26 Score=206.94 Aligned_cols=138 Identities=21% Similarity=0.322 Sum_probs=126.2
Q ss_pred cccHHHHHHHHHhhhhhcccCCCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEE
Q 010123 184 LFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPI 263 (517)
Q Consensus 184 ~~s~eEL~~lv~~~~~e~~~~G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV 263 (517)
.+|++||+.+++. +.+.|.++++|+++++++++|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 4799999999984 4567999999999999999999999999999988999999999999 9999999999999999
Q ss_pred EeCCCCCEEEEEEhhhHhccccc-CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 264 YSGNPKNIIGLLLVKSLLTVRAE-TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 264 ~ddd~d~iVGiV~~kDLl~~~~~-~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++++.++++|+|+.+|++....+ .+.+++++| +++++|++++++.++++.|.+++.+++||+|
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 140 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVID 140 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEEC
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEEC
Confidence 98764599999999999987543 467899987 6689999999999999999999999999999
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.93 E-value=2.4e-25 Score=208.02 Aligned_cols=124 Identities=16% Similarity=0.274 Sum_probs=110.0
Q ss_pred cccCCCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhH
Q 010123 201 AGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSL 280 (517)
Q Consensus 201 ~~~~G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDL 280 (517)
+.++|.|+++|+++++++++|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 3457999999999999999999999999999988999999999999 999999999999999998655799999999999
Q ss_pred hccccc-CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 281 LTVRAE-TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 281 l~~~~~-~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+..... ...+++ |++++++|++++++.++++.|.+++.+++||+|
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvd 137 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVAD 137 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEEC
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEe
Confidence 876432 356777 568999999999999999999999999999999
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.91 E-value=2.7e-24 Score=193.69 Aligned_cols=123 Identities=16% Similarity=0.361 Sum_probs=99.6
Q ss_pred cCCCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhc
Q 010123 203 KGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLT 282 (517)
Q Consensus 203 ~~G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~ 282 (517)
+.|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++.
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 45899999999999999999999999999988999999999999 99999999999999999865479999999999987
Q ss_pred ccccC-CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 283 VRAET-ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 283 ~~~~~-~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
...+. +.+++++| +++++|++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 125 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVD 125 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEe
Confidence 64433 67899998 9999999999999999999999999999999
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.90 E-value=3.3e-24 Score=194.65 Aligned_cols=120 Identities=21% Similarity=0.362 Sum_probs=105.3
Q ss_pred CCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEE-eCCCCCEEEEEEhhhHhccc
Q 010123 206 ELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIY-SGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 206 ~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~-ddd~d~iVGiV~~kDLl~~~ 284 (517)
.++++|+++++++++|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||+ +++.++++|+|+.+|++...
T Consensus 2 ~l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~ 80 (153)
T 3oco_A 2 NADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQA 80 (153)
T ss_dssp ------CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHH
T ss_pred CcCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHH
Confidence 36788999999999999999999999988999999999999 99999999999999999 54447999999999998764
Q ss_pred cc-CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 285 AE-TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 285 ~~-~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.. ...+++++| +++++|++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 123 (153)
T 3oco_A 81 RIDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVID 123 (153)
T ss_dssp HHHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEEC
T ss_pred hcCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEe
Confidence 32 267899998 9999999999999999999999999999999
No 6
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.86 E-value=6.1e-22 Score=176.41 Aligned_cols=103 Identities=25% Similarity=0.422 Sum_probs=92.8
Q ss_pred ccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc---cCCcccccccccCC
Q 010123 223 EKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA---ETETPVSAVSIRRM 299 (517)
Q Consensus 223 ~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~---~~~~~V~dim~r~v 299 (517)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++.... ....+++++| +++
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~~ 79 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RPA 79 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BCC
T ss_pred CCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CCC
Confidence 678999999988999999999999 99999999999999999865479999999999997643 2356899987 568
Q ss_pred cccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 300 PRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 300 ~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++|++++++.++++.|.+++.+++||+|
T Consensus 80 ~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 107 (136)
T 3lfr_A 80 TFVPESKRLNVLLREFRANHNHMAIVID 107 (136)
T ss_dssp CEEETTCBHHHHHHHHHHHTCCEEEEEC
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 9999999999999999999999999999
No 7
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.86 E-value=1.9e-21 Score=171.44 Aligned_cols=105 Identities=30% Similarity=0.492 Sum_probs=95.4
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMP 300 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~ 300 (517)
..+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++......+.+++++| ++++
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999988999999999999 999999999999999998654799999999999987655677899986 6788
Q ss_pred ccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 301 RVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 301 ~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+|++++++.++++.|.+++.+.+||+|
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd 106 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVID 106 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEEC
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 999999999999999999999999999
No 8
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.85 E-value=2.1e-21 Score=171.79 Aligned_cols=103 Identities=19% Similarity=0.361 Sum_probs=93.0
Q ss_pred ccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccC----CcccccccccC
Q 010123 223 EKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAET----ETPVSAVSIRR 298 (517)
Q Consensus 223 ~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~----~~~V~dim~r~ 298 (517)
+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++....++ ..+++++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999988999999999999 9999999999999999976558999999999998765543 24688887 88
Q ss_pred CcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 299 MPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 299 v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++|++++++.++++.|.+++.+.+||+|
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 107 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVD 107 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEEC
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEc
Confidence 99999999999999999999999999999
No 9
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.85 E-value=2.8e-21 Score=177.52 Aligned_cols=110 Identities=18% Similarity=0.298 Sum_probs=94.7
Q ss_pred HHHHhh-cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc------
Q 010123 214 IISGAL-DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE------ 286 (517)
Q Consensus 214 iI~~vl-~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~------ 286 (517)
||.+.+ +|-..+++++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.....
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccc
Confidence 444444 355678999999999999999999999 99999999999999999765 899999999999764322
Q ss_pred --CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 287 --TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 287 --~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.+.+++++|.+++++|++++++.++++.|.+++ ++||||
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd 122 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEEC
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEe
Confidence 257899999999999999999999999998775 599999
No 10
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.84 E-value=2.5e-20 Score=179.02 Aligned_cols=127 Identities=8% Similarity=0.072 Sum_probs=113.6
Q ss_pred ccHHHHHHHHHhhhhhcccCCCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHc---CCcEE
Q 010123 185 FRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILAR---GHSRV 261 (517)
Q Consensus 185 ~s~eEL~~lv~~~~~e~~~~G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~---g~Sr~ 261 (517)
+..++.+.++. .++++|++++++++.|.+.+|+++|++ +++++++++++. ++++.|.++ +++.+
T Consensus 25 l~~~~~~~~l~----------~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~ 91 (205)
T 3kxr_A 25 LPESFTDRALA----------QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNL 91 (205)
T ss_dssp SCHHHHHHHHH----------HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEE
T ss_pred CCHHHHHHHHH----------cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEE
Confidence 44555556654 368999999999999999999999996 899999999999 999999987 78999
Q ss_pred EEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 262 PIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 262 PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
||++++ ++++|+|+.+|++.... +.+++++|.+++++|++++++.++++.|.+++.+.+||||
T Consensus 92 ~Vvd~~-~~lvGivt~~dll~~~~--~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD 154 (205)
T 3kxr_A 92 FIVDEA-DKYLGTVRRYDIFKHEP--HEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVID 154 (205)
T ss_dssp EEECTT-CBEEEEEEHHHHTTSCT--TSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC
T ss_pred EEEcCC-CeEEEEEEHHHHHhCCC--cchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc
Confidence 999865 89999999999987543 6789999989999999999999999999999999999999
No 11
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.84 E-value=2.4e-21 Score=170.72 Aligned_cols=106 Identities=23% Similarity=0.341 Sum_probs=92.5
Q ss_pred cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc--CCccccccccc
Q 010123 220 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE--TETPVSAVSIR 297 (517)
Q Consensus 220 ~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~--~~~~V~dim~r 297 (517)
+|.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++..... .+.+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 478899999999988999999999999 999999999999999998655799999999999876533 257899997 7
Q ss_pred CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 298 RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 298 ~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 109 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVD 109 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEc
Confidence 789999999999999999999999999999
No 12
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.84 E-value=1.3e-20 Score=165.42 Aligned_cols=104 Identities=29% Similarity=0.466 Sum_probs=92.4
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc--cCCcccccccccCC
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA--ETETPVSAVSIRRM 299 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~--~~~~~V~dim~r~v 299 (517)
++.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++.... ..+.+++++| +++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~ 78 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTA 78 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCC
Confidence 3678999999977899999999999 99999999999999999865479999999999987643 2357899997 668
Q ss_pred cccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 300 PRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 300 ~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++++++++.++++.|.+++.+.+||+|
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd 106 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVID 106 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEEC
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEe
Confidence 8999999999999999999999999999
No 13
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.82 E-value=4.2e-20 Score=170.55 Aligned_cols=111 Identities=15% Similarity=0.259 Sum_probs=96.7
Q ss_pred HHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc----
Q 010123 211 ETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE---- 286 (517)
Q Consensus 211 E~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~---- 286 (517)
+++.+.+. +.+.+|+|+|++ +++++++++++. ++++.|.+++++++||++++ |+++|+|+.+|++.....
T Consensus 7 ~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~~ 80 (170)
T 4esy_A 7 RRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWIY 80 (170)
T ss_dssp HHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTHH
T ss_pred HHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhcccc
Confidence 34444444 468899999995 899999999999 99999999999999999875 899999999999864221
Q ss_pred ----------------------CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 287 ----------------------TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 287 ----------------------~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
...+++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd 143 (170)
T 4esy_A 81 EASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQ 143 (170)
T ss_dssp HHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEE
T ss_pred chhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEE
Confidence 13578999999999999999999999999999999999998
No 14
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.80 E-value=3.9e-19 Score=177.68 Aligned_cols=117 Identities=14% Similarity=0.147 Sum_probs=108.1
Q ss_pred CCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHc-----CCcEEEEEeCCCCCEEEEEEhhh
Q 010123 205 GELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILAR-----GHSRVPIYSGNPKNIIGLLLVKS 279 (517)
Q Consensus 205 G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~-----g~Sr~PV~ddd~d~iVGiV~~kD 279 (517)
+.++.+++..+.+++.+.+.+|+++|++ +++++++++++. ++++.|.++ +++++||++++ ++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 4678899999999999999999999996 899999999999 999999987 78999999865 89999999999
Q ss_pred HhcccccCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 280 LLTVRAETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 280 Ll~~~~~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++... .+.+++++|.+++++|++++++.++++.|++++.+.+||||
T Consensus 192 ll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 237 (278)
T 2yvy_A 192 LIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 237 (278)
T ss_dssp HHHSC--TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HhcCC--CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 98753 36789999989999999999999999999999999999999
No 15
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.78 E-value=1.1e-18 Score=187.80 Aligned_cols=134 Identities=13% Similarity=0.129 Sum_probs=120.4
Q ss_pred cccHHHHHHHHHhhhhhcccC---------CCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHH
Q 010123 184 LFRRAQLKALVSIHSQEAGKG---------GELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKIL 254 (517)
Q Consensus 184 ~~s~eEL~~lv~~~~~e~~~~---------G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~ 254 (517)
.++.+|+..+++.. .+. +.+++++++.+++++++.+.+|+++|++ +++++++++++. ++++.++
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 46788888888732 234 7899999999999999999999999996 899999999999 9999999
Q ss_pred Hc-----CCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 255 AR-----GHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 255 ~~-----g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++ +++++||++++ ++++|+|+.+|++... .+.+++++|.+++++|++++++.++++.|++++.+.+||||
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVD 257 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVD 257 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEc
Confidence 86 47999999875 8999999999998753 36789999989999999999999999999999999999999
No 16
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.75 E-value=1.2e-17 Score=168.09 Aligned_cols=116 Identities=16% Similarity=0.187 Sum_probs=107.6
Q ss_pred CCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHc-----CCcEEEEEeCCCCCEEEEEEhhhH
Q 010123 206 ELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILAR-----GHSRVPIYSGNPKNIIGLLLVKSL 280 (517)
Q Consensus 206 ~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~-----g~Sr~PV~ddd~d~iVGiV~~kDL 280 (517)
.++.+++..+.+++.+.+.+|+++|++ +++++++++++. ++++.|.++ +++++||++++ ++++|+|+.+|+
T Consensus 119 ~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~dl 194 (286)
T 2oux_A 119 LLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRDL 194 (286)
T ss_dssp TSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHHH
T ss_pred cCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHHH
Confidence 578889999999999999999999995 799999999999 999999987 89999999865 899999999999
Q ss_pred hcccccCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 281 LTVRAETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 281 l~~~~~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+... .+.+++++|.+++++|++++++.++++.|.+++.+.+||||
T Consensus 195 l~~~--~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd 239 (286)
T 2oux_A 195 IVND--DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTD 239 (286)
T ss_dssp TTSC--TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HcCC--CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 8764 36789999999999999999999999999999999999999
No 17
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.75 E-value=8.4e-18 Score=150.05 Aligned_cols=104 Identities=18% Similarity=0.174 Sum_probs=92.8
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc----------------
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA---------------- 285 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~---------------- 285 (517)
...+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4678999999877899999999999 99999999999999999865 79999999999985421
Q ss_pred -cCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 286 -ETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 286 -~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
....++.++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd 123 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVD 123 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEEC
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 124689999988899999999999999999999999999999
No 18
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.75 E-value=5e-18 Score=153.62 Aligned_cols=109 Identities=17% Similarity=0.255 Sum_probs=96.1
Q ss_pred HHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc--------
Q 010123 215 ISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE-------- 286 (517)
Q Consensus 215 I~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~-------- 286 (517)
-....++...+|+|+|+|..+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.....
T Consensus 6 ~~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~ 83 (156)
T 3ctu_A 6 AKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIM 83 (156)
T ss_dssp HHHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHH
T ss_pred cHHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhcccccccc
Confidence 34555678889999999988999999999999 99999999999999999865 899999999999876432
Q ss_pred CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 287 TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 287 ~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
...+++++|.++++++++++++.++++.|.+++ .+||+|
T Consensus 84 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd 122 (156)
T 3ctu_A 84 ADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVD 122 (156)
T ss_dssp TTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEEC
T ss_pred ccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEc
Confidence 157899999899999999999999999999886 699998
No 19
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.73 E-value=9.1e-18 Score=145.07 Aligned_cols=100 Identities=13% Similarity=0.231 Sum_probs=92.1
Q ss_pred cccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCcccC
Q 010123 224 KTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRVP 303 (517)
Q Consensus 224 ~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~~V~ 303 (517)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++........+++++|.+++++++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 478999996 688999999999 99999999999999999865 89999999999998766656789999989999999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 304 ADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 304 ~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++++.++++.|.+++.+.+||+|
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd 100 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVD 100 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCCCHHHHHHHHHHhCCCeEEEEC
Confidence 999999999999999999999999
No 20
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.73 E-value=8.5e-18 Score=150.90 Aligned_cols=106 Identities=15% Similarity=0.186 Sum_probs=94.2
Q ss_pred hhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc---------CC
Q 010123 218 ALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE---------TE 288 (517)
Q Consensus 218 vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~---------~~ 288 (517)
.-.|.+.+|+++|+|..+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... ..
T Consensus 9 ~~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~ 86 (150)
T 3lqn_A 9 KDEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEE 86 (150)
T ss_dssp HHHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGG
T ss_pred HHhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhc
Confidence 34467889999999877899999999999 99999999999999999865 899999999999865421 35
Q ss_pred cccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 289 TPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 289 ~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.+++++|.++++++++++++.++++.|.+++. +||+|
T Consensus 87 ~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd 123 (150)
T 3lqn_A 87 MKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN 123 (150)
T ss_dssp CBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC
T ss_pred CCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC
Confidence 68999999999999999999999999999986 99998
No 21
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.73 E-value=1.9e-17 Score=149.56 Aligned_cols=108 Identities=17% Similarity=0.229 Sum_probs=91.6
Q ss_pred HHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc---------
Q 010123 216 SGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE--------- 286 (517)
Q Consensus 216 ~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~--------- 286 (517)
++...+.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.....
T Consensus 3 ~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~ 80 (157)
T 2emq_A 3 WEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFERL 80 (157)
T ss_dssp -------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGGG
T ss_pred hhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHHh
Confidence 4556678899999999866889999999999 99999999999999999865 899999999999875432
Q ss_pred CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 287 TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 287 ~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
...+++++|.++++++++++++.++++.|.+++. +||+|
T Consensus 81 ~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd 119 (157)
T 2emq_A 81 ETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEN 119 (157)
T ss_dssp GTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEEC
T ss_pred cCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEc
Confidence 3568999999999999999999999999999986 99998
No 22
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.72 E-value=1.8e-17 Score=149.16 Aligned_cols=102 Identities=19% Similarity=0.198 Sum_probs=93.3
Q ss_pred cccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc----CCcccccccccCC
Q 010123 224 KTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE----TETPVSAVSIRRM 299 (517)
Q Consensus 224 ~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~----~~~~V~dim~r~v 299 (517)
.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... .+.++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999877899999999999 99999999999999999865 899999999999875433 3568999998999
Q ss_pred cccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 300 PRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 300 ~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++|++++++.++++.|.+++.+.+||+|
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVAD 133 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEec
Confidence 9999999999999999999999999999
No 23
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.72 E-value=2.1e-17 Score=152.07 Aligned_cols=103 Identities=17% Similarity=0.196 Sum_probs=92.4
Q ss_pred ccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc------------------
Q 010123 223 EKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR------------------ 284 (517)
Q Consensus 223 ~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~------------------ 284 (517)
..+|+++|+|+.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999877899999999999 99999999999999999865 8999999999998531
Q ss_pred -------------ccCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 285 -------------AETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 285 -------------~~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.....+++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 136 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVD 136 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEEC
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 1125689999998899999999999999999999999999999
No 24
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.72 E-value=4.8e-17 Score=143.41 Aligned_cols=100 Identities=12% Similarity=0.180 Sum_probs=90.4
Q ss_pred ccccccccc-cceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhc-ccc----cCCcccccccccC
Q 010123 225 TAEEAMTPI-ESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLT-VRA----ETETPVSAVSIRR 298 (517)
Q Consensus 225 tV~dIMtPr-~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~-~~~----~~~~~V~dim~r~ 298 (517)
+|+++|+|+ .+++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++. ... ..+.+++++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999976 6899999999999 999999999999999998 4 89999999999985 222 1357899999899
Q ss_pred CcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 299 MPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 299 v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++++++++++.++++.|.+++.+.+||+|
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 112 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLD 112 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEe
Confidence 99999999999999999999999999998
No 25
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.71 E-value=5.5e-17 Score=142.43 Aligned_cols=102 Identities=15% Similarity=0.241 Sum_probs=92.1
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc---CCccccccccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE---TETPVSAVSIR 297 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~---~~~~V~dim~r 297 (517)
|.+.+|+++|++ +++++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++..... .+.+++++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999996 688999999999 999999999999999998 4 899999999999865432 25689999988
Q ss_pred CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 298 RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 298 ~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 105 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVD 105 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEEC
Confidence 999999999999999999999999999999
No 26
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=4.5e-17 Score=149.29 Aligned_cols=110 Identities=12% Similarity=0.176 Sum_probs=98.0
Q ss_pred HHhhcccccccccccccc-cceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc-----cCCc
Q 010123 216 SGALDLTEKTAEEAMTPI-ESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA-----ETET 289 (517)
Q Consensus 216 ~~vl~L~~~tV~dIMtPr-~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~-----~~~~ 289 (517)
.....+...+|+|+|+|+ .+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.... ....
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 93 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQ 93 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTS
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccC
Confidence 345567889999999974 5788999999999 99999999999999999865 89999999999986532 2357
Q ss_pred ccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 290 PVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 290 ~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 94 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (165)
T 3fhm_A 94 SVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEE 131 (165)
T ss_dssp BGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred CHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 89999999999999999999999999999999999999
No 27
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.71 E-value=6.3e-17 Score=141.78 Aligned_cols=101 Identities=13% Similarity=0.188 Sum_probs=91.7
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCC---cccccccccC
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETE---TPVSAVSIRR 298 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~---~~V~dim~r~ 298 (517)
.+.+|+++|++ ++.++++++++. ++++.|.+++++.+||+++ ++++|+|+.+|++....+.. .+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 46799999995 688999999999 9999999999999999986 89999999999997654332 5699999999
Q ss_pred CcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 299 MPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 299 v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++++++++++.++++.|.+++.+.+||+|
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd 106 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLAD 106 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEEC
Confidence 99999999999999999999999999998
No 28
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.70 E-value=1.3e-16 Score=141.01 Aligned_cols=104 Identities=13% Similarity=0.243 Sum_probs=92.2
Q ss_pred hcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhc-ccc---cCCcccccc
Q 010123 219 LDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLT-VRA---ETETPVSAV 294 (517)
Q Consensus 219 l~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~-~~~---~~~~~V~di 294 (517)
+.|...+|+++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++. ... ....++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999984 788999999999 99999999999999999865 89999999999973 322 135689999
Q ss_pred cccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 295 SIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 295 m~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
|.++++++++++++.++++.|.+++.+.+ |+|
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd 109 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIE 109 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEE
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EEC
Confidence 98999999999999999999999999999 999
No 29
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.69 E-value=1.1e-16 Score=142.41 Aligned_cols=99 Identities=11% Similarity=0.188 Sum_probs=89.8
Q ss_pred cccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCC--CEEEEEEhhhHhccccc---CCcccccccccC
Q 010123 224 KTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPK--NIIGLLLVKSLLTVRAE---TETPVSAVSIRR 298 (517)
Q Consensus 224 ~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d--~iVGiV~~kDLl~~~~~---~~~~V~dim~r~ 298 (517)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ + +++|+|+.+|++..... .+.++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999995 789999999999 99999999999999999875 5 89999999999875422 257899999999
Q ss_pred CcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 299 MPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 299 v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++++++ ++.++++.|.+++.+.+||+|
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd 108 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVN 108 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEEC
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEc
Confidence 9999999 999999999999999999999
No 30
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.69 E-value=1.7e-16 Score=143.64 Aligned_cols=101 Identities=11% Similarity=0.167 Sum_probs=91.0
Q ss_pred cccccccccc----cceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc-----CCcccccc
Q 010123 224 KTAEEAMTPI----ESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE-----TETPVSAV 294 (517)
Q Consensus 224 ~tV~dIMtPr----~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~-----~~~~V~di 294 (517)
++|+|+|+|+ ++++++++++++. ++++.|.+++++++||.+ + ++++|+|+.+|++..... .+.+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD-G-DDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES-S-SSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee-C-CEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999987 6789999999999 999999999999999954 3 899999999999875321 35789999
Q ss_pred cccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 295 SIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 295 m~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 116 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD 116 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 999999999999999999999999999999999
No 31
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.69 E-value=7.6e-17 Score=163.26 Aligned_cols=123 Identities=11% Similarity=0.163 Sum_probs=105.2
Q ss_pred CCChhHHHHHHHhhcc-cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc
Q 010123 206 ELTHDETTIISGALDL-TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 206 ~L~~eE~~iI~~vl~L-~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~ 284 (517)
.++++|+++++++++| .+.+|+|+|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|++...
T Consensus 3 ~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~~ 81 (334)
T 2qrd_G 3 DVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNVI 81 (334)
T ss_dssp SHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHHH
Confidence 4567899999999995 4599999999999999999999999 9999999999999999997668999999999998643
Q ss_pred c--------cC------Ccccc-------cccccCC--cccCCCCCHHHHHHHHHhCCCcEEEEEeeC
Q 010123 285 A--------ET------ETPVS-------AVSIRRM--PRVPADMPLYDILNEFQKGSSHMAAVVKVK 329 (517)
Q Consensus 285 ~--------~~------~~~V~-------dim~r~v--~~V~~~~~l~daL~~m~~~~~~~apVVDEy 329 (517)
. .. ..++. ++|.+++ +++++++++.++++.|.+++.+.+||+|++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~ 149 (334)
T 2qrd_G 82 KYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVD 149 (334)
T ss_dssp HHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEE
T ss_pred HHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCC
Confidence 1 11 22333 2366777 899999999999999999999999999953
No 32
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.69 E-value=8.2e-17 Score=146.25 Aligned_cols=104 Identities=16% Similarity=0.262 Sum_probs=92.5
Q ss_pred cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc---------CCcc
Q 010123 220 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE---------TETP 290 (517)
Q Consensus 220 ~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~---------~~~~ 290 (517)
.+...+|+++|+++.+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 577899999999866899999999999 99999999999999999865 799999999999875432 3568
Q ss_pred cccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 291 VSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 291 V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+.++|.+++++|++++++.++++.|.+++. +||+|
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd 122 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEN 122 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEEC
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEe
Confidence 999998899999999999999999999876 99998
No 33
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.68 E-value=1.8e-16 Score=139.71 Aligned_cols=103 Identities=17% Similarity=0.311 Sum_probs=91.4
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhH-hccccc---CCcccccccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSL-LTVRAE---TETPVSAVSI 296 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDL-l~~~~~---~~~~V~dim~ 296 (517)
|.+.+|+++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|+ +..... .+.+++++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 568899999985 788899999999 99999999999999999865 899999999999 764322 3568999998
Q ss_pred cCCcccCCCCCHHHHHHHHHhCC-----CcEEEEEe
Q 010123 297 RRMPRVPADMPLYDILNEFQKGS-----SHMAAVVK 327 (517)
Q Consensus 297 r~v~~V~~~~~l~daL~~m~~~~-----~~~apVVD 327 (517)
++++++++++++.++++.|.+++ .+.+||+|
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd 116 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVD 116 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEEC
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEEC
Confidence 89999999999999999999999 99999999
No 34
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.68 E-value=3e-16 Score=142.93 Aligned_cols=102 Identities=17% Similarity=0.222 Sum_probs=91.2
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc----cCCcccccccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA----ETETPVSAVSI 296 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~----~~~~~V~dim~ 296 (517)
+...+|+++|++ .+++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.... ....+++++|.
T Consensus 14 l~~~~v~~im~~---~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI---PVVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC---CCEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC---CEEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 567899999984 35899999999 99999999999999999865 89999999999987531 13578999998
Q ss_pred c--CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 297 R--RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 297 r--~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+ ++++|++++++.++++.|.+++.+.+||+|
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 121 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIK 121 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEe
Confidence 7 889999999999999999999999999999
No 35
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.68 E-value=5.1e-17 Score=164.49 Aligned_cols=123 Identities=11% Similarity=0.281 Sum_probs=99.7
Q ss_pred ccCCCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHh
Q 010123 202 GKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLL 281 (517)
Q Consensus 202 ~~~G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl 281 (517)
++.|.+++.+++.+++. |.+.+|+|+|+|+.++++++.++++. ++++.|.+++++++||++++.++++|+|+.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 34567777777778887 57889999999999999999999999 9999999999999999997667899999999998
Q ss_pred ccccc----C--------Cc-------ccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 282 TVRAE----T--------ET-------PVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 282 ~~~~~----~--------~~-------~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..... . .. .++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 156 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVID 156 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEEC
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEe
Confidence 64211 0 11 12456788999999999999999999999999999999
No 36
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.67 E-value=3.1e-16 Score=142.28 Aligned_cols=102 Identities=20% Similarity=0.280 Sum_probs=91.5
Q ss_pred cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcE-EEEEeCCCCCEEEEEEhhhHhccc--------------
Q 010123 220 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSR-VPIYSGNPKNIIGLLLVKSLLTVR-------------- 284 (517)
Q Consensus 220 ~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr-~PV~ddd~d~iVGiV~~kDLl~~~-------------- 284 (517)
.+...+|+++|++ +++++++++++. ++++.|.++++++ +||++++ +++|+|+.+|++...
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4678899999985 789999999999 9999999999999 9999864 899999999998642
Q ss_pred -----ccCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 285 -----AETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 285 -----~~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.....+++++|.+ +++|++++++.++++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 133 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVD 133 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEc
Confidence 1235789999888 99999999999999999999999999999
No 37
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.67 E-value=2.5e-16 Score=136.28 Aligned_cols=99 Identities=14% Similarity=0.210 Sum_probs=89.0
Q ss_pred cccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc----CCcccccccccCC
Q 010123 224 KTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE----TETPVSAVSIRRM 299 (517)
Q Consensus 224 ~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~----~~~~V~dim~r~v 299 (517)
++|+++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++....+ .+.+++++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 478999985 788999999999 999999999999999998 4 899999999999865422 2568999998899
Q ss_pred cccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 300 PRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 300 ~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++++++++.++++.|.+++.+.+||+|
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd 103 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEE 103 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEE
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEE
Confidence 9999999999999999999999999999
No 38
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.67 E-value=3.1e-16 Score=138.76 Aligned_cols=104 Identities=16% Similarity=0.180 Sum_probs=89.5
Q ss_pred ccccccccc---ccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc-----CCccc
Q 010123 220 DLTEKTAEE---AMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE-----TETPV 291 (517)
Q Consensus 220 ~L~~~tV~d---IMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~-----~~~~V 291 (517)
++-+.++++ +|+ .+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... .+.++
T Consensus 4 ~~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v 79 (144)
T 2nyc_A 4 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 79 (144)
T ss_dssp GGGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBH
T ss_pred chhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccH
Confidence 355678888 787 4788999999999 99999999999999999865 899999999999875432 25689
Q ss_pred cccccc------CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 292 SAVSIR------RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 292 ~dim~r------~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 80 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 121 (144)
T 2nyc_A 80 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 121 (144)
T ss_dssp HHHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEEC
Confidence 998876 688999999999999999999999999999
No 39
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.66 E-value=2.9e-16 Score=142.22 Aligned_cols=110 Identities=13% Similarity=0.170 Sum_probs=91.8
Q ss_pred HHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeC-CCCCEEEEEEhhhHhccccc-------
Q 010123 215 ISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSG-NPKNIIGLLLVKSLLTVRAE------- 286 (517)
Q Consensus 215 I~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~dd-d~d~iVGiV~~kDLl~~~~~------- 286 (517)
..+.+.+...+|+++|++ +++++++++++. ++++.|.+++++++||+++ +.++++|+|+.+|++.....
T Consensus 4 ~~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~ 80 (164)
T 2pfi_A 4 LGRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAP 80 (164)
T ss_dssp ------CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------
T ss_pred ccccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCC
Confidence 345567788999999996 788899999999 9999999999999999986 24899999999999865422
Q ss_pred -CCcccccccccC------CcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 287 -TETPVSAVSIRR------MPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 287 -~~~~V~dim~r~------v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
...++.++|.++ ++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd 128 (164)
T 2pfi_A 81 GHQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS 128 (164)
T ss_dssp CCCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred cccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE
Confidence 135788888766 78899999999999999999999999999
No 40
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.66 E-value=2.6e-16 Score=145.54 Aligned_cols=106 Identities=13% Similarity=0.169 Sum_probs=91.8
Q ss_pred ccccccccccccccc--eEEe--cCCCChhHHHHHHHHHcCCcEEEEEe-CCCCCEEEEEEhhhHhcccc----------
Q 010123 221 LTEKTAEEAMTPIES--TFSL--DVNSKLDWEAIGKILARGHSRVPIYS-GNPKNIIGLLLVKSLLTVRA---------- 285 (517)
Q Consensus 221 L~~~tV~dIMtPr~~--vv~v--~~d~tl~~eal~~l~~~g~Sr~PV~d-dd~d~iVGiV~~kDLl~~~~---------- 285 (517)
+...+|+++|++..+ ++++ ++++++. ++++.|.+++++++||++ ++.++++|+|+.+|++....
T Consensus 8 ~~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 8 AHKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRESQRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp -CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred hccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCCCeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 367899999998543 7778 9999999 999999999999999994 23489999999999986532
Q ss_pred ------------------cCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 286 ------------------ETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 286 ------------------~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
....+++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 146 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH 146 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE
Confidence 234679999989999999999999999999999999999998
No 41
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.66 E-value=1.8e-16 Score=139.07 Aligned_cols=103 Identities=16% Similarity=0.239 Sum_probs=89.7
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHh-ccccc----CCccccccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLL-TVRAE----TETPVSAVS 295 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl-~~~~~----~~~~V~dim 295 (517)
+.-.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++ ..... .+.+++++|
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m 80 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELA 80 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHH
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHh
Confidence 345689999985 788899999999 99999999999999999765 8999999999998 34322 246899999
Q ss_pred ccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 296 IRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 296 ~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.++++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 112 (133)
T 1y5h_A 81 RDSIYYVDANASIQEMLNVMEEHQVRRVPVIS 112 (133)
T ss_dssp TTCCCCEETTCCHHHHHHHHHHHTCSEEEEEE
T ss_pred cCCCEEECCCCCHHHHHHHHHHcCCCEEEEEE
Confidence 89999999999999999999999999999999
No 42
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.66 E-value=3.7e-16 Score=142.59 Aligned_cols=102 Identities=25% Similarity=0.253 Sum_probs=91.4
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc------------cCCc
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA------------ETET 289 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~------------~~~~ 289 (517)
...+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.... ....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999985 788999999999 99999999999999999865 89999999999986532 2357
Q ss_pred ccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 290 PVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 290 ~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++.++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 116 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVA 116 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEE
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEE
Confidence 89999988999999999999999999999999999999
No 43
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.65 E-value=5.3e-16 Score=144.78 Aligned_cols=100 Identities=20% Similarity=0.263 Sum_probs=90.8
Q ss_pred cccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc-----cCCcccccccccC
Q 010123 224 KTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA-----ETETPVSAVSIRR 298 (517)
Q Consensus 224 ~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~-----~~~~~V~dim~r~ 298 (517)
.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.... ....+++++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 789999984 788999999999 99999999999999999865 89999999999987533 2356899999889
Q ss_pred CcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 299 MPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 299 v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++|++++++.++++.|.+++.+.+||+|
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 113 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVD 113 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEc
Confidence 99999999999999999999999999999
No 44
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.64 E-value=1.6e-16 Score=160.17 Aligned_cols=125 Identities=11% Similarity=0.212 Sum_probs=106.2
Q ss_pred cCCCCChhHHHHHHHhhcc-cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHh
Q 010123 203 KGGELTHDETTIISGALDL-TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLL 281 (517)
Q Consensus 203 ~~G~L~~eE~~iI~~vl~L-~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl 281 (517)
+.+.++++|+++++++++| .+.+|.|+|+|+.++++++.++++. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4567889999999999998 9999999999999999999999999 9999999999999999997767999999999998
Q ss_pred cccc----cC----------Cccccc------ccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEee
Q 010123 282 TVRA----ET----------ETPVSA------VSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVKV 328 (517)
Q Consensus 282 ~~~~----~~----------~~~V~d------im~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDE 328 (517)
.... .. ...+++ +|.++++++++++++.++++.|.+++.+.+||+|+
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~ 153 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQ 153 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEE
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEec
Confidence 6421 00 112333 34678899999999999999999999999999995
No 45
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.64 E-value=7.6e-16 Score=139.00 Aligned_cols=101 Identities=15% Similarity=0.192 Sum_probs=89.3
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc-----CCccccccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE-----TETPVSAVS 295 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~-----~~~~V~dim 295 (517)
+.+.+|+++ .+++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++..... .+.++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 467788888 3688899999999 99999999999999999865 899999999999875432 246789988
Q ss_pred c------cCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 296 I------RRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 296 ~------r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
. ++++++++++++.++++.|.+++.+.+||+|
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 131 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVD 131 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEEC
Confidence 5 7899999999999999999999999999999
No 46
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.60 E-value=2.2e-15 Score=147.60 Aligned_cols=133 Identities=15% Similarity=0.216 Sum_probs=105.5
Q ss_pred cccHHHHHHHHHhhhhhcccCCCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEE
Q 010123 184 LFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPI 263 (517)
Q Consensus 184 ~~s~eEL~~lv~~~~~e~~~~G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV 263 (517)
.+|..||...+... ...+.+... ...++++..+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 51 ivt~~di~~~~~~~----~~~~~~~~~---~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGGG----SKYNLIREK---HERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTTS----GGGHHHHTT---STTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhccc----chhhhhhhc---cccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 57889998877421 111111111 1223344447899999996 788999999999 9999999999999999
Q ss_pred EeCCCCCEEEEEEhhhHhccccc---CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 264 YSGNPKNIIGLLLVKSLLTVRAE---TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 264 ~ddd~d~iVGiV~~kDLl~~~~~---~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++++ ++++|+++.+|++..... ...+++++|.++++++++++++.++++.|.+++.+.+||++
T Consensus 121 vd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~ 186 (280)
T 3kh5_A 121 VNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVS 186 (280)
T ss_dssp ECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred EcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 9865 899999999999875432 23479999989999999999999999999999999999996
No 47
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.59 E-value=5.6e-15 Score=146.98 Aligned_cols=129 Identities=15% Similarity=0.209 Sum_probs=107.3
Q ss_pred cccHHHHHHHHHhhhhhcccCCCCChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEE
Q 010123 184 LFRRAQLKALVSIHSQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPI 263 (517)
Q Consensus 184 ~~s~eEL~~lv~~~~~e~~~~G~L~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV 263 (517)
.+|..||...+.. ... ......+.+++.+.+|+++|++ +++++++++++. ++++.|.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~-------~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCK-------DSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----ccc-------ccccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 4688888776641 100 0234556667778999999996 788999999999 9999999999999999
Q ss_pred EeCCCCCEEEEEEhhhHhccccc--CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 264 YSGNPKNIIGLLLVKSLLTVRAE--TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 264 ~ddd~d~iVGiV~~kDLl~~~~~--~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++++ ++++|+++.+|++..... ...+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 130 vd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd 194 (296)
T 3ddj_A 130 VDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVID 194 (296)
T ss_dssp ECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred EcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEc
Confidence 9765 899999999999875432 24689999999999999999999999999999999999999
No 48
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.59 E-value=6.6e-15 Score=158.62 Aligned_cols=131 Identities=13% Similarity=0.177 Sum_probs=110.5
Q ss_pred cccHHHHHHHHHhhhhhcccCCCCC-----hhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCC
Q 010123 184 LFRRAQLKALVSIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGH 258 (517)
Q Consensus 184 ~~s~eEL~~lv~~~~~e~~~~G~L~-----~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~ 258 (517)
.++.+||...+... +..|.|. +++++++++++++ +++|++ +++++++++++. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~~----Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIARA----GGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHHc----CCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 57888999888732 2223344 5778888888654 789996 788999999999 99999999999
Q ss_pred cEEEEEeC-CCCCEEEEEEhhhHhcccccCCccccccccc-CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 259 SRVPIYSG-NPKNIIGLLLVKSLLTVRAETETPVSAVSIR-RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 259 Sr~PV~dd-d~d~iVGiV~~kDLl~~~~~~~~~V~dim~r-~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++||+++ +.++++|+|+.+|++... +.+.+++++|.+ ++++|++++++.++++.|.+++.+.+||||
T Consensus 122 ~~~pVvd~~~~~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd 191 (491)
T 1zfj_A 122 SGVPIVETLANRKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVD 191 (491)
T ss_dssp SEEEEESCTTTCBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEEC
T ss_pred CEEEEEEeCCCCEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEc
Confidence 99999982 348999999999998643 346789999887 899999999999999999999999999999
No 49
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.58 E-value=1.4e-14 Score=139.17 Aligned_cols=99 Identities=11% Similarity=0.065 Sum_probs=90.3
Q ss_pred ccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCccc
Q 010123 223 EKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRV 302 (517)
Q Consensus 223 ~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~~V 302 (517)
.-+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.... +.+++++|.++++++
T Consensus 12 ~~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v 85 (213)
T 1vr9_A 12 HMKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFV 85 (213)
T ss_dssp -CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCE
T ss_pred ccCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEE
Confidence 4578999984 788999999999 99999999999999999865 89999999999987654 568999999999999
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 303 PADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 303 ~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++++++.++++.|.+++.+.+||+|
T Consensus 86 ~~~~~l~~a~~~m~~~~~~~lpVvd 110 (213)
T 1vr9_A 86 HEEDNITHALLLFLEHQEPYLPVVD 110 (213)
T ss_dssp ETTSBHHHHHHHHHHCCCSEEEEEC
T ss_pred CCCCcHHHHHHHHHHhCCCEEEEEc
Confidence 9999999999999999999999999
No 50
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.58 E-value=4.7e-16 Score=172.77 Aligned_cols=104 Identities=18% Similarity=0.118 Sum_probs=91.6
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHH-HcCCcEEEEEeCCCCCEEEEEEhhhHhcccccC-------------
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKIL-ARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAET------------- 287 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~-~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~------------- 287 (517)
.+.+|+|+|+|++++.++++++++. |+.+.|. +++++++||+|++ ++++|+|+.+|++......
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999999999999999999 9999999 7999999999875 8999999999998653211
Q ss_pred --------------------------------------CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 --------------------------------------ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 --------------------------------------~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|.+++++|++++++.++++.|++++.+++||+|
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVve 606 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVTE 606 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEEE
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEEE
Confidence 0137789999999999999999999999999999999996
No 51
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.57 E-value=1.2e-14 Score=146.50 Aligned_cols=104 Identities=16% Similarity=0.179 Sum_probs=92.2
Q ss_pred cccccccccc---cccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccC-----Cccc
Q 010123 220 DLTEKTAEEA---MTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAET-----ETPV 291 (517)
Q Consensus 220 ~L~~~tV~dI---MtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~-----~~~V 291 (517)
.+.+.+|+++ |+ .+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...... +.++
T Consensus 183 ~~~~~~v~~~~~~m~--~~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v 258 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 258 (323)
T ss_dssp GGCCSBGGGTTCSBC--TTCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETTHHHHHHHTTHHHHTTSBH
T ss_pred hhhhCcHHHcCCCCC--CCcEEECCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHHHHHHhhchhhhccCCH
Confidence 3556789999 76 4788999999999 99999999999999999865 8999999999998754332 4689
Q ss_pred cccccc------CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 292 SAVSIR------RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 292 ~dim~r------~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 259 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 300 (323)
T 3t4n_C 259 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVD 300 (323)
T ss_dssp HHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEEC
T ss_pred HHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEEC
Confidence 999887 789999999999999999999999999999
No 52
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.56 E-value=1.6e-14 Score=156.80 Aligned_cols=132 Identities=13% Similarity=0.188 Sum_probs=107.7
Q ss_pred ccccHHHHHHHHHhhhhhcccCCCCC-----hhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcC
Q 010123 183 ALFRRAQLKALVSIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARG 257 (517)
Q Consensus 183 ~~~s~eEL~~lv~~~~~e~~~~G~L~-----~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g 257 (517)
..+|++++...+...+. -|.|. +++.++++.++. ++++|++ +++++++++++. ++++.|.+++
T Consensus 76 dtvTe~~lAia~a~~Gg----iGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~ 143 (511)
T 3usb_A 76 DTVTEADMAIAMARQGG----LGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYR 143 (511)
T ss_dssp TTTCSHHHHHHHHHHTC----EEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHC
T ss_pred hhhcHHHHHHHHHhcCC----ceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcC
Confidence 35688998777753221 13332 345567777764 5577874 788999999999 9999999999
Q ss_pred CcEEEEEeC--CCCCEEEEEEhhhHhcccccCCccccccccc-CCcccCCCCCHHHHHHHHHhCCCcEEEEEee
Q 010123 258 HSRVPIYSG--NPKNIIGLLLVKSLLTVRAETETPVSAVSIR-RMPRVPADMPLYDILNEFQKGSSHMAAVVKV 328 (517)
Q Consensus 258 ~Sr~PV~dd--d~d~iVGiV~~kDLl~~~~~~~~~V~dim~r-~v~~V~~~~~l~daL~~m~~~~~~~apVVDE 328 (517)
++++||+++ + ++++|+|+.+|++.. ...+.+++++|.+ ++++|++++++.++++.|++++.+.+||||+
T Consensus 144 ~s~~pVvd~g~~-~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe 215 (511)
T 3usb_A 144 ISGVPVVNNLDE-RKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN 215 (511)
T ss_dssp CSEEEEESCTTT-CBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT
T ss_pred CcEEEEEecCCC-CEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC
Confidence 999999986 4 899999999999763 3346789999987 9999999999999999999999999999993
No 53
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.55 E-value=1.2e-14 Score=144.51 Aligned_cols=103 Identities=15% Similarity=0.207 Sum_probs=92.4
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc----------CCcc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE----------TETP 290 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~----------~~~~ 290 (517)
..+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++....+ .+.+
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 228 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLD-QAVKLMLRRGFRRLPVIDDD-NKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKV 228 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCB
T ss_pred cccccHHHhhcC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHHHhhcChhhhcCcC
Confidence 346689999984 788999999999 99999999999999999865 899999999999876431 2568
Q ss_pred cccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 291 VSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 291 V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+.++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 229 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 265 (296)
T 3ddj_A 229 VKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILN 265 (296)
T ss_dssp HHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 9999999999999999999999999999999999999
No 54
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.55 E-value=3.5e-14 Score=139.11 Aligned_cols=100 Identities=10% Similarity=0.220 Sum_probs=87.4
Q ss_pred cccc-ccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc-----------------
Q 010123 225 TAEE-AMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE----------------- 286 (517)
Q Consensus 225 tV~d-IMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~----------------- 286 (517)
++++ +|++ +++++++++++. ++++.|.+++++++||++++.++++|+++.+|++.....
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 4445 4553 899999999999 999999999999999998645899999999999865421
Q ss_pred -CCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 287 -TETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 287 -~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.+.+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 122 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVN 122 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEEC
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEc
Confidence 14589999999999999999999999999999999999999
No 55
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.54 E-value=2.1e-15 Score=163.04 Aligned_cols=142 Identities=13% Similarity=0.198 Sum_probs=111.4
Q ss_pred ccccHHHHHHHHHhhhhhcccCCCC-----ChhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcC
Q 010123 183 ALFRRAQLKALVSIHSQEAGKGGEL-----THDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARG 257 (517)
Q Consensus 183 ~~~s~eEL~~lv~~~~~e~~~~G~L-----~~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g 257 (517)
..+|++++...+..++ .-|.| .++++++++++ ++++++|+ .+++++++++++. ++++.|.+++
T Consensus 52 dtVTe~~ma~a~a~~G----GiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~--~d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQEG----GIGFIHKNMSIEQQAAQVHQV-----KIFEAGVV--THPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHHT----CEEEECSSSCHHHHHHHHHHH-----HHCCC--C--BCCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHcC----CcceecCCCCHHHHHHHHHhc-----cccccccc--cCceEECCCCCHH-HHHHHHHHcC
Confidence 4578999988886322 22334 55678889888 56789999 4889999999999 9999999999
Q ss_pred CcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccc-c-CCcccCCCCCHHHHHHHHHhCCCcEEEEEeeCCCCccc
Q 010123 258 HSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSI-R-RMPRVPADMPLYDILNEFQKGSSHMAAVVKVKGKSKKS 335 (517)
Q Consensus 258 ~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~-r-~v~~V~~~~~l~daL~~m~~~~~~~apVVDEyG~~~G~ 335 (517)
|+++||++++ ++++|+|+.+||+.. ...+.+++++|. + +++++++++++.++++.|++++.+.+|||||+|...|+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~-~~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~Gi 197 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFV-TDLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGM 197 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTC-CCTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEE
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhc-ccCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEe
Confidence 9999999875 899999999999743 334678999987 4 59999999999999999999999999999999999999
Q ss_pred ccc
Q 010123 336 QSI 338 (517)
Q Consensus 336 ~~~ 338 (517)
+..
T Consensus 198 IT~ 200 (496)
T 4fxs_A 198 ITA 200 (496)
T ss_dssp ECC
T ss_pred ehH
Confidence 833
No 56
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.53 E-value=1.9e-14 Score=140.19 Aligned_cols=101 Identities=16% Similarity=0.222 Sum_probs=89.0
Q ss_pred ccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc----------------
Q 010123 223 EKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE---------------- 286 (517)
Q Consensus 223 ~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~---------------- 286 (517)
..+|+|+|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++.....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999984 788999999999 99999999999999999865 899999999999864311
Q ss_pred --------------------------------------------------------------------------------
Q 010123 287 -------------------------------------------------------------------------------- 286 (517)
Q Consensus 287 -------------------------------------------------------------------------------- 286 (517)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------CCcccccccc-cCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 287 ---------------------TETPVSAVSI-RRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 287 ---------------------~~~~V~dim~-r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
...+++++|. +++.++++++++.++++.|.+++.+.+||+|
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd 224 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVID 224 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEEC
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEc
Confidence 0235778888 8999999999999999999999999999999
No 57
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.53 E-value=1.9e-14 Score=156.55 Aligned_cols=103 Identities=13% Similarity=0.163 Sum_probs=89.6
Q ss_pred ccccccccccccccceEEecCC-CChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc----cCCccccccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVN-SKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA----ETETPVSAVS 295 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d-~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~----~~~~~V~dim 295 (517)
|.+.+|+|+|++ ++++++++ +++. ++++.|.+++++++||++++.++++|+|+.+||+.... ..+.+|+++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 557899999994 78899999 9999 99999999999999999833489999999999986532 2357899999
Q ss_pred ccCCcccCCCCCHHHHHHHHHhCCCcEEEEEee
Q 010123 296 IRRMPRVPADMPLYDILNEFQKGSSHMAAVVKV 328 (517)
Q Consensus 296 ~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDE 328 (517)
.+++++|++++++.++++.|.+++ ++||||+
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~ 488 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILGK 488 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEEE
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEeC
Confidence 999999999999999999997765 5799993
No 58
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.51 E-value=6.9e-14 Score=137.51 Aligned_cols=102 Identities=16% Similarity=0.210 Sum_probs=89.5
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHh------cccc----------
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLL------TVRA---------- 285 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl------~~~~---------- 285 (517)
.+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++ ....
T Consensus 124 ~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~~~~~~~ 199 (282)
T 2yzq_A 124 KGVEIEPYYQR--YVSIVWEGTPLK-AALKALLLSNSMALPVVDSE-GNLVGIVDETDLLRDSEIVRIMKSTELAASSEE 199 (282)
T ss_dssp GGCBSTTTSBS--CCCCEETTSBHH-HHHHHHHTCSSSEEEEECTT-SCEEEEEEGGGGGGCGGGCC-------------
T ss_pred ccCcHHHHhCC--CCEEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHhhhhhhhhhhccchhhhhhhh
Confidence 46789999974 788999999999 99999999999999999865 7899999999998 4321
Q ss_pred ------------------cCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 286 ------------------ETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 286 ------------------~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
....+++++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd 259 (282)
T 2yzq_A 200 EWILESHPTLLFEKFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPVIR 259 (282)
T ss_dssp -------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred hhhcccchHHHHhHhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEEEC
Confidence 024679999999999999999999999999999999999999
No 59
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.49 E-value=1e-13 Score=137.29 Aligned_cols=60 Identities=8% Similarity=0.082 Sum_probs=53.4
Q ss_pred cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCC-CCCEEEEEEhhhHhc
Q 010123 220 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGN-PKNIIGLLLVKSLLT 282 (517)
Q Consensus 220 ~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd-~d~iVGiV~~kDLl~ 282 (517)
...+++|+|+|++ +++++.+++++. ++.+.|.+++++++||++++ .++++|+|+.+||+.
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~ 69 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEG 69 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHH
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHH
Confidence 3567899999995 899999999999 99999999999999999864 257999999999975
No 60
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.49 E-value=3.4e-14 Score=139.74 Aligned_cols=99 Identities=15% Similarity=0.201 Sum_probs=71.2
Q ss_pred cccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCcccC
Q 010123 224 KTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRVP 303 (517)
Q Consensus 224 ~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~~V~ 303 (517)
++|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+++.+|++.... +.+++++|.+++++++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 478999994 788999999999 99999999999999999864 89999999999986643 5689999888899999
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEee
Q 010123 304 ADMPLYDILNEFQKGSSHMAAVVKV 328 (517)
Q Consensus 304 ~~~~l~daL~~m~~~~~~~apVVDE 328 (517)
+++++.++++.|.+++.+.+||+|+
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~ 99 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDS 99 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcC
Confidence 9999999999999999999999993
No 61
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.47 E-value=7.1e-15 Score=159.24 Aligned_cols=144 Identities=10% Similarity=0.076 Sum_probs=19.8
Q ss_pred cccHHHHHHHHHhhhhhcccCCCCC-hhHHHHHHHhhcccccccccc-cccccceEEecCCCChhHHHHHHHHHcCCcEE
Q 010123 184 LFRRAQLKALVSIHSQEAGKGGELT-HDETTIISGALDLTEKTAEEA-MTPIESTFSLDVNSKLDWEAIGKILARGHSRV 261 (517)
Q Consensus 184 ~~s~eEL~~lv~~~~~e~~~~G~L~-~eE~~iI~~vl~L~~~tV~dI-MtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~ 261 (517)
.++++++...+...+..+--...++ +++++++.++.. .++ |++ +++++++++++. ++++.|.+++++++
T Consensus 61 ~vt~~~la~~la~~gg~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~~s~~ 131 (503)
T 1me8_A 61 SVSGEKMAIALAREGGISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTTHNTV 131 (503)
T ss_dssp TTCSHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHT------TTC---------------------------------
T ss_pred hhhHHHHHHHHHhCCCcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcCceEE
Confidence 4677888877763211000001122 456677766543 456 996 889999999999 99999999999999
Q ss_pred EEEeCC--CCCEEEEEEhhhHhcccccCCcccccccccC--CcccCCCCCHHHHHHHHHhCCCcEEEEEeeCCCCcccc
Q 010123 262 PIYSGN--PKNIIGLLLVKSLLTVRAETETPVSAVSIRR--MPRVPADMPLYDILNEFQKGSSHMAAVVKVKGKSKKSQ 336 (517)
Q Consensus 262 PV~ddd--~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~--v~~V~~~~~l~daL~~m~~~~~~~apVVDEyG~~~G~~ 336 (517)
||++++ .++++|+|+.+|++......+.+++++|.++ +++|++++++.++++.|++++.+.+||||++|...|++
T Consensus 132 pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lvGiI 210 (503)
T 1me8_A 132 AVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLRYIV 210 (503)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred EEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEEEEE
Confidence 999864 3789999999999853223467899998876 99999999999999999999999999999887777777
No 62
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.46 E-value=3e-13 Score=136.79 Aligned_cols=102 Identities=13% Similarity=0.189 Sum_probs=89.4
Q ss_pred ccccccc---ccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc-----CCccccc
Q 010123 222 TEKTAEE---AMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE-----TETPVSA 293 (517)
Q Consensus 222 ~~~tV~d---IMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~-----~~~~V~d 293 (517)
...++++ +|+ .+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++..... .+.++.+
T Consensus 180 ~~~~v~~l~~~m~--~~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTW--SNLATASMETKVY-DVIKMLAEKNISAVPIVNSE-GTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCccc--CCceEECCCCcHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 4578899 487 4788999999999 99999999999999999865 799999999999875432 2467889
Q ss_pred cccc------CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 294 VSIR------RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 294 im~r------~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+|.+ ++++|++++++.++++.|.+++.+.+||+|
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd 295 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVD 295 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEEC
T ss_pred HHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEC
Confidence 9874 889999999999999999999999999999
No 63
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.45 E-value=1.2e-14 Score=156.73 Aligned_cols=136 Identities=13% Similarity=0.210 Sum_probs=23.0
Q ss_pred cccHHHHHHHHHhhhhhcccCCCCC-----hhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCC
Q 010123 184 LFRRAQLKALVSIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGH 258 (517)
Q Consensus 184 ~~s~eEL~~lv~~~~~e~~~~G~L~-----~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~ 258 (517)
.++.+|+...+... +..|.+. +++++++++++++. ++|+ .+++++++++++. ++++.|.++++
T Consensus 57 ~vt~~ela~ava~~----GglG~i~~~~~~e~~~~~I~~v~~~~-----~~m~--~~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMARE----GGLGVIHRNMGIEEQVEQVKRVKRAE-----RLIV--EDVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHhc----CCceeecCCCCHHHHHHHHHhhcchh-----hccc--cCceEECCCCCHH-HHHHHHHHcCC
Confidence 46778988888632 2223343 56788999998764 4788 4899999999999 99999999999
Q ss_pred cEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEeeCCCCcccc
Q 010123 259 SRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVKVKGKSKKSQ 336 (517)
Q Consensus 259 Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDEyG~~~G~~ 336 (517)
+++||+++ ++++|+|+.+|++. +.+.+++++|.++++++++++++.++++.|++++.+.+||||++|...|++
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGii 197 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLI 197 (486)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEE
Confidence 99999986 89999999999986 346789999988999999999999999999999999999999999999988
No 64
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.43 E-value=1.8e-14 Score=155.64 Aligned_cols=140 Identities=14% Similarity=0.190 Sum_probs=23.2
Q ss_pred ccccHHHHHHHHHhhhhhcccCCCCC-----hhHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcC
Q 010123 183 ALFRRAQLKALVSIHSQEAGKGGELT-----HDETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARG 257 (517)
Q Consensus 183 ~~~s~eEL~~lv~~~~~e~~~~G~L~-----~eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g 257 (517)
..+|++++...+...+ .-|.|. +++++++.++ ++++++|++ +++++++++++. ++++.|.+++
T Consensus 51 ~tVTe~~lA~ala~~G----GiGvI~~~~~~e~~a~~v~~v-----k~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQEG----GIGIIHKNMGIEQQAAEVRKV-----KKHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHHT----SEEEECCSSCHHHHHHHHHHH-----HHCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHcC----CCccccCCCCHHHHHHHhhhh-----cccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 3578899988886322 123333 4557777776 457899984 788999999999 9999999999
Q ss_pred CcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccc-c-CCcccCCCCCHHHHHHHHHhCCCcEEEEEeeCCCCccc
Q 010123 258 HSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSI-R-RMPRVPADMPLYDILNEFQKGSSHMAAVVKVKGKSKKS 335 (517)
Q Consensus 258 ~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~-r-~v~~V~~~~~l~daL~~m~~~~~~~apVVDEyG~~~G~ 335 (517)
++++||++ + ++++|+|+.+|+... ...+.+++++|. + +++++++++++.++++.|++++.+.+||||++|...|+
T Consensus 119 ~s~~pVvd-~-g~lvGIVt~rDl~~~-~~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGi 195 (490)
T 4avf_A 119 FSGFPVVE-Q-GELVGIVTGRDLRVK-PNAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGL 195 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEE-C-CEEEEEEEhHHhhhc-cccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEE
Confidence 99999998 3 899999999999643 334678999987 4 69999999999999999999999999999999999998
Q ss_pred cc
Q 010123 336 QS 337 (517)
Q Consensus 336 ~~ 337 (517)
+.
T Consensus 196 IT 197 (490)
T 4avf_A 196 VT 197 (490)
T ss_dssp --
T ss_pred Ee
Confidence 83
No 65
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.41 E-value=9.4e-13 Score=133.06 Aligned_cols=102 Identities=17% Similarity=0.225 Sum_probs=87.6
Q ss_pred ccccccc--cccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccC-----Cccccccc
Q 010123 223 EKTAEEA--MTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAET-----ETPVSAVS 295 (517)
Q Consensus 223 ~~tV~dI--MtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~-----~~~V~dim 295 (517)
..+++++ |+ ..+++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...... +.++.++|
T Consensus 189 ~~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~ 265 (330)
T 2v8q_E 189 SKSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 265 (330)
T ss_dssp GSBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHG
T ss_pred cCCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECCC-CcEEEEEEHHHHHHHHhccccccccCcHHHHH
Confidence 3456666 54 24788999999999 99999999999999999865 8999999999998765432 46788887
Q ss_pred ------ccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 296 ------IRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 296 ------~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 266 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd 303 (330)
T 2v8q_E 266 QHRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVD 303 (330)
T ss_dssp GGCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEc
Confidence 47899999999999999999999999999999
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.26 E-value=8.2e-13 Score=142.49 Aligned_cols=120 Identities=15% Similarity=0.182 Sum_probs=7.3
Q ss_pred CChhH-HHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 207 LTHDE-TTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 207 L~~eE-~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
++.++ ++.+.+++ +++++|++ +++++++++++. ++++.|.+++++.+||++++ ++++|+|+.+|++.. .
T Consensus 82 ~~~e~~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~-~ 151 (494)
T 1vrd_A 82 LTPDEQARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFE-K 151 (494)
T ss_dssp SCHHHHHHHHHHHH-----TC-----------------------------------------------------------
T ss_pred CChHHHHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhh-c
Confidence 44433 44555554 46789985 789999999999 99999999999999999865 799999999999863 2
Q ss_pred cCCccccccccc--CCcccCCCCCHHHHHHHHHhCCCcEEEEEeeCCCCcccc
Q 010123 286 ETETPVSAVSIR--RMPRVPADMPLYDILNEFQKGSSHMAAVVKVKGKSKKSQ 336 (517)
Q Consensus 286 ~~~~~V~dim~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVDEyG~~~G~~ 336 (517)
+.+.+++++|.+ ++++|++++++.++++.|.+++.+.+||||+.|...|++
T Consensus 152 ~~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiI 204 (494)
T 1vrd_A 152 NLSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLI 204 (494)
T ss_dssp -----------------------------------------------------
T ss_pred CCCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEE
Confidence 345789999987 899999999999999999999999999999655555544
No 67
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.08 E-value=1.6e-11 Score=131.99 Aligned_cols=120 Identities=12% Similarity=0.206 Sum_probs=8.6
Q ss_pred hHHHHHHHhhcccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCC--CCCEEEEEEhhhHhcccccC
Q 010123 210 DETTIISGALDLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGN--PKNIIGLLLVKSLLTVRAET 287 (517)
Q Consensus 210 eE~~iI~~vl~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd--~d~iVGiV~~kDLl~~~~~~ 287 (517)
++.++++.+-.+. ..|. .+++++.++.++. ++.+++.+++||.+||+++. .++++|||+-+|+... +.
T Consensus 129 ~Qa~~V~~VKr~e-----~g~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d~ 198 (556)
T 4af0_A 129 EQAAMVRRVKKYE-----NGFI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--DA 198 (556)
T ss_dssp HHHHHHHHHHHCC-----C-------------------------------------------------------------
T ss_pred HHHHHHHHHHhcc-----cCcc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--cc
Confidence 4567777775544 4565 4788999999999 99999999999999999852 3689999999998754 44
Q ss_pred CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEeeCCCCccccccc
Q 010123 288 ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVKVKGKSKKSQSIS 339 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVDEyG~~~G~~~~~ 339 (517)
+++|+++|..+++++++++++.++.+.|++++...+||||+.|...|++...
T Consensus 199 ~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~k 250 (556)
T 4af0_A 199 ETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARS 250 (556)
T ss_dssp ----------------------------------------------------
T ss_pred ceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEec
Confidence 7899999999999999999999999999999999999999999999998443
No 68
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.06 E-value=3e-12 Score=138.88 Aligned_cols=110 Identities=15% Similarity=0.215 Sum_probs=64.7
Q ss_pred cccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCC--CCCEEEEEEhhhHhcccc-cCCccccccccc--C
Q 010123 224 KTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGN--PKNIIGLLLVKSLLTVRA-ETETPVSAVSIR--R 298 (517)
Q Consensus 224 ~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd--~d~iVGiV~~kDLl~~~~-~~~~~V~dim~r--~ 298 (517)
++++++|++ +++++++++++. ++++.|.+++++.+||++++ .++++|+|+.+|+..... ..+.+++++|.+ +
T Consensus 108 ~~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~ 184 (514)
T 1jcn_A 108 KNFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIE 184 (514)
T ss_dssp HTCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBC
T ss_pred hhhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCC
Confidence 378899984 688999999999 99999999999999999863 378999999999976421 235789999987 8
Q ss_pred CcccCCCCCHHHHHHHHHhCCCcEEEEEeeCCCCcccc
Q 010123 299 MPRVPADMPLYDILNEFQKGSSHMAAVVKVKGKSKKSQ 336 (517)
Q Consensus 299 v~~V~~~~~l~daL~~m~~~~~~~apVVDEyG~~~G~~ 336 (517)
+++|++++++.++++.|.+++.+.+||||+.|...|++
T Consensus 185 ~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiI 222 (514)
T 1jcn_A 185 LVVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAII 222 (514)
T ss_dssp CCCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC---
T ss_pred CeEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEE
Confidence 99999999999999999999999999999999999998
No 69
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.67 E-value=4.7e-08 Score=77.86 Aligned_cols=65 Identities=11% Similarity=0.247 Sum_probs=55.2
Q ss_pred ceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc-c----CCcccccccccCCccc
Q 010123 235 STFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA-E----TETPVSAVSIRRMPRV 302 (517)
Q Consensus 235 ~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~-~----~~~~V~dim~r~v~~V 302 (517)
+++++++++++. ++++.|.+++++++||+++ ++++|+++.+|++.... . .+.+++++|.+++.+|
T Consensus 1 k~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 1 KAIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp CEEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CCEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 367899999999 9999999999999999985 78999999999975321 1 2468999999988765
No 70
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.51 E-value=2.6e-07 Score=71.77 Aligned_cols=64 Identities=11% Similarity=0.244 Sum_probs=54.5
Q ss_pred eEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc-----CCcccccccccCCccc
Q 010123 236 TFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE-----TETPVSAVSIRRMPRV 302 (517)
Q Consensus 236 vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~-----~~~~V~dim~r~v~~V 302 (517)
++++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++..... .+.+++++|.+++++|
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~v 70 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeEC
Confidence 57899999999 9999999999999999986 899999999999876322 2567999998877654
No 71
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.51 E-value=8.5e-08 Score=91.61 Aligned_cols=103 Identities=11% Similarity=0.182 Sum_probs=53.7
Q ss_pred ccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCc-c
Q 010123 223 EKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMP-R 301 (517)
Q Consensus 223 ~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~-~ 301 (517)
+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++...... ..+.+.+.+-.+ .
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~ 145 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLL 145 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC------------
T ss_pred CCcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEe
Confidence 4569999996 788999999999 99999999999999999865 8999999999998765421 222333322111 1
Q ss_pred cCCCCCHHHHHHHHHhCCCcEEEEEeeCC
Q 010123 302 VPADMPLYDILNEFQKGSSHMAAVVKVKG 330 (517)
Q Consensus 302 V~~~~~l~daL~~m~~~~~~~apVVDEyG 330 (517)
.....++.++.+.|.+++.+.++|++..|
T Consensus 146 ~~~~~~l~~~~~~l~~~~~~~l~V~~~~~ 174 (213)
T 1vr9_A 146 EDKPGELRKVVDALALSNINILSVITTRS 174 (213)
T ss_dssp -----------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEEEEec
Confidence 23445699999999999999999987544
No 72
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.22 E-value=8e-07 Score=81.17 Aligned_cols=40 Identities=18% Similarity=0.206 Sum_probs=38.6
Q ss_pred CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+.+|+++|.+++++|++++++.++++.|.+++.+.+||+|
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd 56 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVD 56 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEEC
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEc
Confidence 5789999999999999999999999999999999999999
No 73
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.08 E-value=4.2e-06 Score=74.85 Aligned_cols=61 Identities=18% Similarity=0.299 Sum_probs=54.5
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAE 286 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~ 286 (517)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++.....
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHT
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHHHH
Confidence 367899999996 788999999999 999999999999999998 4 899999999999986543
No 74
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.07 E-value=7.4e-06 Score=79.13 Aligned_cols=40 Identities=10% Similarity=0.177 Sum_probs=38.2
Q ss_pred CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd 45 (245)
T 3l2b_A 6 KLKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVAD 45 (245)
T ss_dssp CCBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEEC
T ss_pred cCcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 4689999999999999999999999999999999999999
No 75
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.03 E-value=8.6e-06 Score=64.63 Aligned_cols=29 Identities=10% Similarity=0.082 Sum_probs=27.6
Q ss_pred CcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 299 MPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 299 v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+++|.+++++.+|++.|.+++...+||+|
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d 30 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 56899999999999999999999999998
No 76
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.00 E-value=7.6e-06 Score=73.66 Aligned_cols=64 Identities=11% Similarity=0.197 Sum_probs=56.4
Q ss_pred cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCC---CEEEEEEhhhHhcccc
Q 010123 220 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPK---NIIGLLLVKSLLTVRA 285 (517)
Q Consensus 220 ~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d---~iVGiV~~kDLl~~~~ 285 (517)
...+.+|+++|+++.+++++++++++. ++++.|.+++++++||++++ + +++|+|+.+|++....
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~l~ 143 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKILV 143 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHHHH
Confidence 346789999999766889999999999 99999999999999999865 5 8999999999987643
No 77
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.00 E-value=9.5e-06 Score=69.02 Aligned_cols=59 Identities=20% Similarity=0.312 Sum_probs=52.4
Q ss_pred ccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 223 EKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 223 ~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
..+++++|++ ++.++++++++. ++++.|.+++++++||++++ |+++|+|+.+|++....
T Consensus 61 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt~~dl~~~l~ 119 (122)
T 3kpb_A 61 KKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVTSEDISRLFG 119 (122)
T ss_dssp CCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHC
T ss_pred ccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEeHHHHHHHhh
Confidence 4489999985 678899999999 99999999999999999865 89999999999987643
No 78
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=97.94 E-value=1.9e-05 Score=61.00 Aligned_cols=30 Identities=10% Similarity=0.109 Sum_probs=27.9
Q ss_pred CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 298 RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 298 ~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
++.++++++++.++++.|.+++.+.+||+|
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d 30 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVME 30 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEE
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEE
Confidence 356799999999999999999999999999
No 79
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=97.93 E-value=1.6e-05 Score=70.49 Aligned_cols=40 Identities=13% Similarity=0.113 Sum_probs=37.8
Q ss_pred Cccccccccc--CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIR--RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+.+++++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 22 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd 63 (148)
T 3lv9_A 22 EKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCR 63 (148)
T ss_dssp TCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEES
T ss_pred CCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEc
Confidence 5689999987 899999999999999999999999999998
No 80
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.93 E-value=1.7e-05 Score=69.03 Aligned_cols=40 Identities=8% Similarity=0.125 Sum_probs=37.6
Q ss_pred CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 6 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 45 (138)
T 2yzi_A 6 KAPIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIN 45 (138)
T ss_dssp TSBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hhhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 4578999999999999999999999999999999999999
No 81
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=97.92 E-value=9.2e-06 Score=70.31 Aligned_cols=59 Identities=20% Similarity=0.331 Sum_probs=52.8
Q ss_pred ccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 223 EKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 223 ~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
+.+++++|++ ++.++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++....
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~~ 124 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDDK-GNLKGIISIRDITRAID 124 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHHH
Confidence 5789999985 678899999999 99999999999999999865 89999999999987643
No 82
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=97.92 E-value=1.3e-05 Score=69.25 Aligned_cols=40 Identities=13% Similarity=0.089 Sum_probs=38.3
Q ss_pred CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+.+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 4 s~~v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 43 (128)
T 3gby_A 4 SVTFSYLAETDYPVFTLGGSTADAARRLAASGCACAPVLD 43 (128)
T ss_dssp TCBGGGGCBCCSCCEETTSBHHHHHHHHHHHTCSEEEEEE
T ss_pred ceEHHHhhcCCcceECCCCCHHHHHHHHHHCCCcEEEEEE
Confidence 5689999999999999999999999999999999999999
No 83
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.91 E-value=1.7e-05 Score=70.41 Aligned_cols=39 Identities=23% Similarity=0.298 Sum_probs=37.0
Q ss_pred ccccccccc--CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 289 TPVSAVSIR--RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 289 ~~V~dim~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.+++++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd 68 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICD 68 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEEC
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEEC
Confidence 479999988 899999999999999999999999999999
No 84
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=97.91 E-value=1.8e-05 Score=68.72 Aligned_cols=60 Identities=20% Similarity=0.360 Sum_probs=53.9
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||++ + ++++|+|+.+|++....
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~~ 130 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDAI 130 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHHH
Confidence 467899999985 788999999999 999999999999999998 4 89999999999987643
No 85
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.91 E-value=2e-05 Score=71.02 Aligned_cols=40 Identities=13% Similarity=0.050 Sum_probs=37.5
Q ss_pred CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 4 ~~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd 43 (160)
T 2o16_A 4 MIKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVD 43 (160)
T ss_dssp CCBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred cCcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 4578999989999999999999999999999999999999
No 86
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.88 E-value=1.8e-05 Score=70.61 Aligned_cols=39 Identities=5% Similarity=-0.088 Sum_probs=36.6
Q ss_pred cccccccc--cCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 289 TPVSAVSI--RRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 289 ~~V~dim~--r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.+++++|. ++++++++++++.++++.|.+++.+.+||+|
T Consensus 15 ~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd 55 (156)
T 3ctu_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT 55 (156)
T ss_dssp TTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEEC
T ss_pred HHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEEC
Confidence 46899998 7899999999999999999999999999999
No 87
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=97.88 E-value=1e-05 Score=71.18 Aligned_cols=61 Identities=16% Similarity=0.381 Sum_probs=53.2
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
..+.+|+++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++....
T Consensus 82 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 82 TNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAAL 142 (152)
T ss_dssp --CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred hccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHHH
Confidence 456789999996 677899999999 99999999999999999865 89999999999997654
No 88
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=97.87 E-value=2.1e-05 Score=67.01 Aligned_cols=61 Identities=21% Similarity=0.314 Sum_probs=54.2
Q ss_pred cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 220 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 220 ~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
.+.+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++....
T Consensus 61 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l~ 121 (125)
T 1pbj_A 61 DLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAKM 121 (125)
T ss_dssp CTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHHC
T ss_pred cccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3467899999985 688999999999 9999999999999999986 89999999999987643
No 89
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=97.86 E-value=2e-05 Score=69.04 Aligned_cols=60 Identities=10% Similarity=0.165 Sum_probs=52.6
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
..+.+++++|+| +.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++....
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l~ 126 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQIV 126 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC-
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHHh
Confidence 356789999974 78899999999 99999999999999999865 89999999999997643
No 90
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.85 E-value=3.1e-05 Score=67.23 Aligned_cols=40 Identities=10% Similarity=0.090 Sum_probs=37.5
Q ss_pred CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+.+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 7 ~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 46 (138)
T 2p9m_A 7 NIKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVID 46 (138)
T ss_dssp TCBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEEC
T ss_pred cCCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEEC
Confidence 4678999988999999999999999999999999999998
No 91
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=97.84 E-value=3.3e-05 Score=71.20 Aligned_cols=61 Identities=10% Similarity=0.170 Sum_probs=54.2
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
..+.+++++|++ +++++++++++. ++++.|.+++++++||++++ ++++|+|+.+|++....
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTSC
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 467789999985 678999999999 99999999999999999865 89999999999987543
No 92
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=97.84 E-value=2.7e-05 Score=68.26 Aligned_cols=39 Identities=15% Similarity=0.221 Sum_probs=37.0
Q ss_pred cccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 289 TPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 289 ~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 43 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTA 43 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEE
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 578899999999999999999999999999999999999
No 93
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=97.83 E-value=4.5e-05 Score=69.76 Aligned_cols=59 Identities=8% Similarity=0.071 Sum_probs=52.4
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
.+.+|+++| + +++++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++....
T Consensus 105 ~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dil~~l~ 163 (172)
T 3lhh_A 105 ERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVTLQDMMDALT 163 (172)
T ss_dssp CCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred CcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEeeHHHHHHHHh
Confidence 367899999 3 678999999999 99999999999999999865 89999999999997643
No 94
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.82 E-value=2.2e-05 Score=69.47 Aligned_cols=40 Identities=18% Similarity=0.136 Sum_probs=36.7
Q ss_pred Ccccccccc--cCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSI--RRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~--r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|. ++++++++++++.++++.|.+++.+.+||+|
T Consensus 14 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd 55 (150)
T 3lqn_A 14 QIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLD 55 (150)
T ss_dssp HCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred cCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEEC
Confidence 357899987 5699999999999999999999999999999
No 95
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=97.81 E-value=2.6e-05 Score=67.57 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=51.2
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~ 284 (517)
.+.+++++|++ ++++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++...
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~~-g~~~Giit~~Dil~~l 124 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDEH-GGISGLVTMEDVLEQI 124 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 46789999974 67899999999 99999999999999999865 8999999999998754
No 96
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=97.81 E-value=2.3e-05 Score=70.26 Aligned_cols=61 Identities=21% Similarity=0.303 Sum_probs=53.9
Q ss_pred cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 220 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 220 ~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
...+.+++++|++ ++++++++++. ++++.|.++++.++||++++ ++++|+|+.+|++....
T Consensus 92 ~~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~l~ 152 (157)
T 1o50_A 92 RLIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLALW 152 (157)
T ss_dssp CCSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHH
T ss_pred HHcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHHHH
Confidence 3467889999995 77899999999 99999999999999999855 89999999999987643
No 97
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=97.80 E-value=3.4e-05 Score=69.75 Aligned_cols=61 Identities=16% Similarity=0.271 Sum_probs=54.5
Q ss_pred cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 220 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 220 ~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
...+.+|+++|++ +++++++++++. ++++.|.+++++++||+++ |+++|+|+.+|++....
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3457899999984 788999999999 9999999999999999986 89999999999997654
No 98
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=97.80 E-value=3.6e-05 Score=68.74 Aligned_cols=58 Identities=12% Similarity=0.105 Sum_probs=52.2
Q ss_pred ccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 223 EKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 223 ~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
+.+|+++| + ++.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++....
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l~ 142 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEELF 142 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHHH
T ss_pred CCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHHh
Confidence 67899999 3 688999999999 99999999999999999865 89999999999997643
No 99
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=97.79 E-value=2e-05 Score=71.48 Aligned_cols=61 Identities=21% Similarity=0.393 Sum_probs=54.3
Q ss_pred cccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc
Q 010123 220 DLTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 220 ~L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~ 284 (517)
...+.+|+++|++ +++++++++++. ++++.|.++++.++||++++ ++++|+|+.+|++...
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~~ 154 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRAA 154 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 4567889999995 678899999999 99999999999999999865 8999999999998764
No 100
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.78 E-value=3.4e-05 Score=68.63 Aligned_cols=40 Identities=18% Similarity=0.139 Sum_probs=37.1
Q ss_pred Cccccccccc--CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIR--RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 10 ~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd 51 (157)
T 2emq_A 10 QMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLD 51 (157)
T ss_dssp CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEEC
T ss_pred hCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEc
Confidence 4678999876 899999999999999999999999999999
No 101
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.78 E-value=3.7e-05 Score=68.63 Aligned_cols=40 Identities=13% Similarity=0.194 Sum_probs=38.0
Q ss_pred CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 12 ~~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd 51 (164)
T 2pfi_A 12 HVRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVE 51 (164)
T ss_dssp SCBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEES
T ss_pred CCCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEe
Confidence 5689999999999999999999999999999999999998
No 102
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=97.77 E-value=5.3e-05 Score=65.97 Aligned_cols=40 Identities=13% Similarity=0.405 Sum_probs=36.0
Q ss_pred Cccccc---ccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSA---VSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~d---im~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
+.++++ +|.++++++++++++.++++.|.+++.+.+||+|
T Consensus 7 ~~~v~~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 49 (144)
T 2nyc_A 7 KIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIID 49 (144)
T ss_dssp GSBGGGSSCCBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEC
T ss_pred hcchhhcCCCCCCCceEECCCCcHHHHHHHHHHcCcceeeEEc
Confidence 346677 7778999999999999999999999999999999
No 103
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.76 E-value=2.9e-05 Score=69.11 Aligned_cols=60 Identities=13% Similarity=0.280 Sum_probs=52.6
Q ss_pred ccccccccccc----cceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc
Q 010123 223 EKTAEEAMTPI----ESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 223 ~~tV~dIMtPr----~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~ 284 (517)
+.+++++|.++ .++.++++++++. ++++.|.+++.+++||++++ ++++|+|+.+|++...
T Consensus 86 ~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 56799999743 4788999999999 99999999999999999865 8999999999998754
No 104
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=97.75 E-value=2.4e-05 Score=67.61 Aligned_cols=59 Identities=20% Similarity=0.317 Sum_probs=53.0
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~ 284 (517)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||+++ ++++|+|+.+|++...
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTC
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 356789999985 778899999999 9999999999999999986 7999999999998764
No 105
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=97.75 E-value=3.2e-05 Score=66.78 Aligned_cols=58 Identities=7% Similarity=0.181 Sum_probs=51.4
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~ 284 (517)
.+.+++++|++ +.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++...
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDEF-GGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECTT-SCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 56789999964 56899999999 99999999999999999865 8999999999998753
No 106
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.74 E-value=3.2e-05 Score=69.26 Aligned_cols=40 Identities=20% Similarity=0.196 Sum_probs=37.2
Q ss_pred Cccccccccc--CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIR--RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r--~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|
T Consensus 13 ~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd 54 (159)
T 1yav_A 13 EATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLD 54 (159)
T ss_dssp TCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEEC
T ss_pred HhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEEC
Confidence 4678999877 899999999999999999999999999999
No 107
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=97.74 E-value=4.9e-05 Score=65.81 Aligned_cols=58 Identities=12% Similarity=0.216 Sum_probs=51.4
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~ 284 (517)
.+.+++++|+| +.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++...
T Consensus 70 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt~~dil~~l 127 (130)
T 3i8n_A 70 GQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVTLEDIFEHL 127 (130)
T ss_dssp TTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred CcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEEHHHHHHHH
Confidence 36789999963 67899999999 99999999999999999865 8999999999998753
No 108
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.73 E-value=4.8e-05 Score=68.93 Aligned_cols=38 Identities=5% Similarity=-0.081 Sum_probs=34.9
Q ss_pred ccccccc--cCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 290 PVSAVSI--RRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 290 ~V~dim~--r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.++++|. .++++|++++++.+|++.|.+++...+||+|
T Consensus 16 ~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd 55 (156)
T 3k6e_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVT 55 (156)
T ss_dssp TGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEEC
T ss_pred cHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEc
Confidence 5778885 5789999999999999999999999999999
No 109
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.73 E-value=4.1e-05 Score=66.62 Aligned_cols=58 Identities=16% Similarity=0.148 Sum_probs=50.9
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~ 284 (517)
...+++++|. ++.++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++...
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l 125 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEEI 125 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHHH
Confidence 3467899995 467899999999 99999999999999999865 8999999999998764
No 110
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.70 E-value=5.4e-05 Score=74.59 Aligned_cols=40 Identities=13% Similarity=0.255 Sum_probs=38.3
Q ss_pred CcccccccccCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|.+++++|.+++++.++.+.|.+++.+.+||||
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd 51 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVD 51 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEES
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEe
Confidence 5679999999999999999999999999999999999998
No 111
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.67 E-value=9.1e-05 Score=80.22 Aligned_cols=112 Identities=17% Similarity=0.158 Sum_probs=84.4
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMP 300 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~ 300 (517)
-.+.+|+++|++ .++++++++.++. ++++.|.+++..++||+|++ ++++|+|+.+|++...... ..+++.+.+-.+
T Consensus 172 ~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~V 247 (511)
T 3usb_A 172 DYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLLV 247 (511)
T ss_dssp CSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBCC
T ss_pred cCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhccceee
Confidence 356789999996 5788999999999 99999999999999999876 8999999999999865432 233444333222
Q ss_pred --ccCCCCCHHHHHHHHHhCCCcEEEEEeeCCCCcccc
Q 010123 301 --RVPADMPLYDILNEFQKGSSHMAAVVKVKGKSKKSQ 336 (517)
Q Consensus 301 --~V~~~~~l~daL~~m~~~~~~~apVVDEyG~~~G~~ 336 (517)
.+.......+.++.+.+.+...+.|-...|...++.
T Consensus 248 ~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~ 285 (511)
T 3usb_A 248 GAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVI 285 (511)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHH
T ss_pred eeeeeeccchHHHHHHHHhhccceEEecccccchhhhh
Confidence 244444567778888899999887766555544443
No 112
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=97.67 E-value=4.2e-05 Score=68.73 Aligned_cols=55 Identities=7% Similarity=0.143 Sum_probs=49.9
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHh
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLL 281 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl 281 (517)
.+.+++++|+| ++++++++++. ++++.|.+++..++||++++ |+++|+|+.+|++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dil 155 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDII 155 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhc
Confidence 46789999974 77899999999 99999999999999999865 8999999999986
No 113
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.65 E-value=4.9e-05 Score=72.20 Aligned_cols=61 Identities=13% Similarity=0.194 Sum_probs=54.3
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
..+.+|+++|++ +++++++++++. ++++.|.+++...+||++++ |+++|+|+..|++....
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i~ 173 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALVR 173 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 356789999984 688999999999 99999999999999999865 89999999999987654
No 114
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.62 E-value=2.4e-05 Score=84.50 Aligned_cols=100 Identities=14% Similarity=0.221 Sum_probs=19.7
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCC--
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRM-- 299 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v-- 299 (517)
.+.+|+++|+|..+++++++++++. ++++.|.++++.++||+|++ ++++|+|+.+|++....... ...+.+.+-.
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4568999999865699999999999 99999999999999999876 89999999999997654321 1222211111
Q ss_pred cccCCCCCHHHHHHHHHhCCCcEEEE
Q 010123 300 PRVPADMPLYDILNEFQKGSSHMAAV 325 (517)
Q Consensus 300 ~~V~~~~~l~daL~~m~~~~~~~apV 325 (517)
..++. ....+.++.|.+.+.+.++|
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l~V 260 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVLCI 260 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEEEE
T ss_pred cccCc-hhHHHHHHHHHhhhccceEE
Confidence 12444 66777789999989887544
No 115
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.61 E-value=7.7e-05 Score=68.01 Aligned_cols=40 Identities=20% Similarity=0.117 Sum_probs=36.1
Q ss_pred CcccccccccC----Cccc--CCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRR----MPRV--PADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~----v~~V--~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+++++|.+. +++| ++++++.++++.|.+++.+.+||+|
T Consensus 10 ~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~ 55 (185)
T 2j9l_A 10 KTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVV 55 (185)
T ss_dssp CCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEES
T ss_pred cCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEE
Confidence 46789998776 7889 9999999999999999999999993
No 116
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.56 E-value=0.00011 Score=67.71 Aligned_cols=41 Identities=12% Similarity=0.170 Sum_probs=37.3
Q ss_pred CCcccccccc--cCCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 287 TETPVSAVSI--RRMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 287 ~~~~V~dim~--r~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.+.+++++|. ++++++++++++.++++.|.+++...+||+|
T Consensus 34 ~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd 76 (173)
T 3ocm_A 34 AERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCR 76 (173)
T ss_dssp TTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEES
T ss_pred CCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEe
Confidence 3678999986 4688999999999999999999999999998
No 117
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.37 E-value=0.00015 Score=71.66 Aligned_cols=61 Identities=15% Similarity=0.295 Sum_probs=53.9
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
..+.+++++|++ +++++++++++. ++++.|.++++..+||++++ |+++|+|+..|++....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC-
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHH
Confidence 357789999984 688999999999 99999999999999999865 89999999999997654
No 118
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.26 E-value=0.00019 Score=71.55 Aligned_cols=61 Identities=13% Similarity=0.272 Sum_probs=54.2
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
..+.+|+++|++ +++++++++++. ++++.|.+++..++||++++ |+++|+|+..|++....
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i~ 258 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVID 258 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHHH
Confidence 357789999985 688999999999 99999999999999999865 89999999999987643
No 119
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.26 E-value=0.0003 Score=76.15 Aligned_cols=40 Identities=10% Similarity=0.161 Sum_probs=37.9
Q ss_pred CcccccccccCCcccCCC-CCHHHHHHHHHhCCCcEEEEEe
Q 010123 288 ETPVSAVSIRRMPRVPAD-MPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 288 ~~~V~dim~r~v~~V~~~-~~l~daL~~m~~~~~~~apVVD 327 (517)
+.+|+++|.+++++|+++ +++.++++.|.+++.+.+||+|
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd 423 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVD 423 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEEC
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEE
Confidence 467999999999999999 9999999999999999999998
No 120
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.07 E-value=0.00039 Score=77.06 Aligned_cols=56 Identities=7% Similarity=-0.031 Sum_probs=49.0
Q ss_pred ccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 225 TAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 225 tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
+++|+|++ +++++++|+++. ++++.|.+++..++||++ + |+++|+|+.+|+++...
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVve-~-G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVTE-R-GKLVGIVEREDVAYGYS 624 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEEE-T-TEEEEEEEGGGTEECCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehhhHHHHHh
Confidence 48999995 788999999999 999999999999999994 4 89999999999987654
No 121
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.03 E-value=0.00053 Score=73.41 Aligned_cols=61 Identities=15% Similarity=0.295 Sum_probs=54.6
Q ss_pred ccccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccc
Q 010123 221 LTEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRA 285 (517)
Q Consensus 221 L~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~ 285 (517)
-.+.+++++|++ +++++++++++. ++++.|.+++...+||+|++ |+++|+|+.+|++....
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i~ 276 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 276 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHHH
Confidence 367899999984 788999999999 99999999999999999865 89999999999987643
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.93 E-value=0.00051 Score=73.94 Aligned_cols=101 Identities=14% Similarity=0.170 Sum_probs=16.0
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCC--
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRM-- 299 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v-- 299 (517)
.+.+|+++|+|+.+++++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|+++...... ..++- ...+
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~p~-a~kd~-~grl~v 220 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAKTYPL-ASKDE-QGRLRV 220 (490)
T ss_dssp ----------------------------------------------------------------CTT-CCBCT-TSCBCC
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhccCcc-hhhhc-cCccee
Confidence 4678999999755789999999999 99999999999999999865 89999999999997643211 11111 0111
Q ss_pred -cccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 300 -PRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 300 -~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
..+.......+.++.+.+.+...+ ++|
T Consensus 221 ~aavG~~~~~~~~a~~l~~aG~d~I-~id 248 (490)
T 4avf_A 221 GAAVGTGADTGERVAALVAAGVDVV-VVD 248 (490)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEE-EEE
T ss_pred eeeeccccchHHHHHHHhhcccceE-Eec
Confidence 123333344566666767777644 444
No 123
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.87 E-value=0.00053 Score=73.62 Aligned_cols=101 Identities=16% Similarity=0.261 Sum_probs=22.6
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCc-
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMP- 300 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~- 300 (517)
.+.+++++|+++.+++++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++...... ...++...+-..
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~-~~~~D~~~~l~vg 229 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVIEHP-NAARDEKGRLLVG 229 (494)
T ss_dssp ----------------------------------------------------------CHHHHTCT-TCCBCTTSCBCCE
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhhccc-cccccchhhhccc
Confidence 4578999999756789999999999 99999999999999999865 8999999999999764321 112221001001
Q ss_pred -ccCCCCCHHHHHHHHHhCCCcEEEE
Q 010123 301 -RVPADMPLYDILNEFQKGSSHMAAV 325 (517)
Q Consensus 301 -~V~~~~~l~daL~~m~~~~~~~apV 325 (517)
-+.......+.+..+.+.+...+.+
T Consensus 230 a~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 230 AAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred cccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 1333455677888888888777654
No 124
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=96.74 E-value=0.00068 Score=73.12 Aligned_cols=61 Identities=15% Similarity=0.200 Sum_probs=44.1
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhccc
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVR 284 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~ 284 (517)
.+.+++++|+|+.++++++++.++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVNDE-FQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECTT-SBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CCEEEeehHhHHHHhh
Confidence 5678999999766689999999999 99999999999999999876 8999999999999764
No 125
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.56 E-value=0.0011 Score=71.10 Aligned_cols=107 Identities=17% Similarity=0.247 Sum_probs=21.5
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCC--
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRM-- 299 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v-- 299 (517)
.+.+++++|++ +++++++++++. ++++.|.+++...+||++++ ++++|+|+.+|++....... ...+.+.+-.
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 45689999985 688999999999 99999999999999999865 89999999999997654211 1111111100
Q ss_pred cccCCCCCHHHHHHHHHhCCCcEEEEEee-CCCCcccc
Q 010123 300 PRVPADMPLYDILNEFQKGSSHMAAVVKV-KGKSKKSQ 336 (517)
Q Consensus 300 ~~V~~~~~l~daL~~m~~~~~~~apVVDE-yG~~~G~~ 336 (517)
..+..+ . .+.+..+.+.+...+ |+|. .|...+.+
T Consensus 223 ~~~~~~-~-~~~a~~l~~~gvd~l-vvdta~G~~~~~L 257 (486)
T 2cu0_A 223 AAVSPF-D-IKRAIELDKAGVDVI-VVDTAHAHNLKAI 257 (486)
T ss_dssp EEECTT-C-HHHHHHHHHTTCSEE-EEECSCCCCHHHH
T ss_pred ceechh-h-HHHHHHHHHhcCCce-EEEecCCcEeehh
Confidence 012233 3 566778888888875 5663 44444443
No 126
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.48 E-value=0.0088 Score=63.90 Aligned_cols=101 Identities=14% Similarity=0.177 Sum_probs=70.5
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCc-
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMP- 300 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~- 300 (517)
.+.+++++|++ .+++++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++....... ...+...+-..
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 56789999984 2678899999999 99999999999999999865 89999999999997654311 11111101011
Q ss_pred -ccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 301 -RVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 301 -~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
.+.......+.+..+.+.+...+. ++
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~iv-i~ 252 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAIV-ID 252 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEEE-EC
T ss_pred EeccCchhHHHHHHHHHHcCCCeEE-Ee
Confidence 133333445556667777777654 55
No 127
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.45 E-value=0.0011 Score=71.49 Aligned_cols=98 Identities=14% Similarity=0.120 Sum_probs=58.3
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCcccccccccCCc-
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETETPVSAVSIRRMP- 300 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~~V~dim~r~v~- 300 (517)
.+.+++++|++..+++++++++++. ++++.|.+++..++||++++ ++++|+|+.+|++....... ...+ +..++.
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~~-~~~~-~~~rl~v 246 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVNDC-DELVAIIARTDLKKNRDYPL-ASKD-SQKQLLC 246 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESSS-SCCC----CCCCSSCCCCTT-CCBC-TTSCBCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECCC-CeEEEEEEHHHHHHHhhCcc-hhcc-cCCceee
Confidence 4678999999655788999999999 99999999999999999865 89999999999987643221 1222 111111
Q ss_pred --ccCCCCCHHHHHHHHHhCCCcEE
Q 010123 301 --RVPADMPLYDILNEFQKGSSHMA 323 (517)
Q Consensus 301 --~V~~~~~l~daL~~m~~~~~~~a 323 (517)
.+.......+.++.+.+.+...+
T Consensus 247 ga~vG~~~~~~~~a~~~~~aG~d~v 271 (514)
T 1jcn_A 247 GAAVGTREDDKYRLDLLTQAGVDVI 271 (514)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEE
T ss_pred eeEecCchhhHHHHHHHHHcCCCEE
Confidence 13333445666677777777654
No 128
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.33 E-value=0.0016 Score=70.25 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=16.1
Q ss_pred cccccccccccccceEEecCCCChhHHHHHHHHHcCCcEEEEEeCCCCCEEEEEEhhhHhcccccCCc----cccccccc
Q 010123 222 TEKTAEEAMTPIESTFSLDVNSKLDWEAIGKILARGHSRVPIYSGNPKNIIGLLLVKSLLTVRAETET----PVSAVSIR 297 (517)
Q Consensus 222 ~~~tV~dIMtPr~~vv~v~~d~tl~~eal~~l~~~g~Sr~PV~ddd~d~iVGiV~~kDLl~~~~~~~~----~V~dim~r 297 (517)
.+.+|+++||+ ++++++.+.+++ ++.+.|.+++..++||+|++ ++++|+|+.+|+.+....... .-+.++..
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~Vg 273 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKNQNYPYASKVPESKQLYCG 273 (556)
T ss_dssp ----------------------------------------------------------------CTTCCBCTTTCCBCCE
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEEechhhhhhhCCcchhcchhhceeeE
Confidence 35689999996 799999999999 99999999999999999876 899999999999875321110 00111111
Q ss_pred CCcccCCCCCHHHHHHHHHhCCCcEEEEEe
Q 010123 298 RMPRVPADMPLYDILNEFQKGSSHMAAVVK 327 (517)
Q Consensus 298 ~v~~V~~~~~l~daL~~m~~~~~~~apVVD 327 (517)
-.+-+.+ .-.+-+..+.+.+...+ |+|
T Consensus 274 AAVgv~~--d~~eR~~aLv~AGvD~i-viD 300 (556)
T 4af0_A 274 AAIGTRP--GDKDRLKLLAEAGLDVV-VLD 300 (556)
T ss_dssp EEECSSH--HHHHHHHHHHHTTCCEE-EEC
T ss_pred EEeccCc--cHHHHHHHHHhcCCcEE-EEe
Confidence 1122333 24556667777887765 555
Done!