Query 010125
Match_columns 517
No_of_seqs 315 out of 3085
Neff 8.9
Searched_HMMs 46136
Date Thu Mar 28 21:21:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010125.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010125hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 2.6E-96 6E-101 768.5 54.7 481 18-513 51-535 (539)
2 PLN02880 tyrosine decarboxylas 100.0 5.4E-91 1.2E-95 729.6 53.8 482 18-514 7-488 (490)
3 KOG0628 Aromatic-L-amino-acid/ 100.0 3.3E-89 7.1E-94 664.9 40.9 464 21-513 1-474 (511)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 8.1E-75 1.7E-79 608.0 47.1 467 24-504 22-519 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 7.8E-75 1.7E-79 588.7 30.4 370 55-429 1-373 (373)
6 KOG0629 Glutamate decarboxylas 100.0 2.1E-73 4.5E-78 548.2 30.6 471 24-510 31-509 (510)
7 TIGR03811 tyr_de_CO2_Ent tyros 100.0 3.2E-69 6.9E-74 569.1 50.6 464 19-512 12-604 (608)
8 COG0076 GadB Glutamate decarbo 100.0 1.7E-59 3.7E-64 483.7 38.7 442 37-512 4-451 (460)
9 PLN02263 serine decarboxylase 100.0 5.8E-58 1.2E-62 467.6 37.8 361 72-511 74-444 (470)
10 TIGR01788 Glu-decarb-GAD gluta 100.0 1.1E-56 2.3E-61 462.3 38.7 399 64-511 15-430 (431)
11 PLN03032 serine decarboxylase; 100.0 4.2E-50 9.1E-55 405.1 35.0 356 73-506 8-372 (374)
12 PRK02769 histidine decarboxyla 100.0 1.6E-48 3.4E-53 396.7 36.7 355 74-509 8-371 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 1.1E-44 2.4E-49 368.4 34.9 340 96-506 1-344 (345)
14 KOG1383 Glutamate decarboxylas 100.0 4.1E-35 8.9E-40 287.7 33.4 394 64-516 54-452 (491)
15 PRK13520 L-tyrosine decarboxyl 100.0 8E-35 1.7E-39 298.9 34.9 367 71-509 2-370 (371)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 2.6E-34 5.5E-39 295.4 35.6 366 73-506 2-372 (373)
17 COG1104 NifS Cysteine sulfinat 100.0 2.3E-33 5E-38 276.3 32.2 342 94-513 2-380 (386)
18 COG0520 csdA Selenocysteine ly 100.0 2.6E-33 5.6E-38 286.3 33.3 352 95-509 24-404 (405)
19 TIGR00461 gcvP glycine dehydro 100.0 1E-30 2.3E-35 285.0 37.1 384 72-513 467-870 (939)
20 PRK04366 glycine dehydrogenase 100.0 1.2E-30 2.6E-35 274.9 35.9 402 54-515 34-453 (481)
21 PRK05367 glycine dehydrogenase 100.0 6.7E-30 1.5E-34 283.7 35.8 383 71-513 478-878 (954)
22 TIGR03402 FeS_nifS cysteine de 100.0 1.6E-28 3.5E-33 252.9 33.3 341 96-512 2-374 (379)
23 PRK00451 glycine dehydrogenase 100.0 1.5E-28 3.2E-33 258.5 32.6 382 53-508 30-446 (447)
24 cd06453 SufS_like Cysteine des 100.0 2E-28 4.2E-33 251.8 31.6 346 96-504 2-373 (373)
25 TIGR01979 sufS cysteine desulf 100.0 2.9E-28 6.2E-33 253.1 32.6 355 95-511 20-402 (403)
26 TIGR01977 am_tr_V_EF2568 cyste 100.0 3E-28 6.5E-33 250.7 31.3 347 96-506 2-375 (376)
27 PRK09295 bifunctional cysteine 100.0 5E-28 1.1E-32 251.4 32.8 352 95-509 25-403 (406)
28 PRK10874 cysteine sulfinate de 100.0 6.6E-28 1.4E-32 250.2 33.5 355 94-511 20-399 (401)
29 TIGR03392 FeS_syn_CsdA cystein 100.0 5.5E-28 1.2E-32 250.5 32.5 355 95-511 18-396 (398)
30 TIGR03531 selenium_SpcS O-phos 100.0 7.7E-28 1.7E-32 247.0 32.9 301 64-419 28-356 (444)
31 TIGR02006 IscS cysteine desulf 100.0 3.8E-28 8.3E-33 251.8 28.4 347 94-512 4-379 (402)
32 PLN02651 cysteine desulfurase 100.0 7.4E-28 1.6E-32 246.5 29.9 288 96-430 2-304 (364)
33 PLN02855 Bifunctional selenocy 100.0 1.1E-26 2.3E-31 242.8 33.2 359 94-516 33-423 (424)
34 cd06451 AGAT_like Alanine-glyo 100.0 4.2E-27 9.2E-32 240.3 29.2 343 98-508 2-355 (356)
35 TIGR03403 nifS_epsilon cystein 100.0 3.9E-26 8.4E-31 235.4 34.3 344 96-512 2-377 (382)
36 cd00613 GDC-P Glycine cleavage 100.0 1.9E-26 4.2E-31 239.1 30.5 369 75-504 3-398 (398)
37 PF00266 Aminotran_5: Aminotra 100.0 2E-26 4.4E-31 236.6 29.9 344 96-500 2-371 (371)
38 PRK02948 cysteine desulfurase; 100.0 5.2E-26 1.1E-30 234.4 31.1 344 96-514 3-378 (381)
39 PRK14012 cysteine desulfurase; 100.0 3E-26 6.6E-31 237.8 28.0 347 95-512 5-381 (404)
40 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 2.8E-25 6E-30 229.1 34.9 316 134-512 64-383 (387)
41 TIGR01814 kynureninase kynuren 99.9 2.7E-25 5.9E-30 230.8 31.3 372 73-508 6-405 (406)
42 PLN02409 serine--glyoxylate am 99.9 3.1E-25 6.6E-30 229.7 29.9 351 98-512 12-374 (401)
43 TIGR01976 am_tr_V_VC1184 cyste 99.9 4.5E-25 9.8E-30 228.7 31.3 340 95-504 19-397 (397)
44 KOG1549 Cysteine desulfurase N 99.9 1.2E-25 2.5E-30 222.4 24.5 349 92-512 42-420 (428)
45 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.7E-24 1.4E-28 217.1 35.2 310 136-508 47-360 (361)
46 TIGR02326 transamin_PhnW 2-ami 99.9 2.2E-24 4.8E-29 220.8 29.4 343 99-508 7-360 (363)
47 PLN02414 glycine dehydrogenase 99.9 1.8E-24 4E-29 239.2 30.5 330 128-513 563-910 (993)
48 PRK12566 glycine dehydrogenase 99.9 1.8E-23 3.9E-28 227.0 34.4 381 69-512 477-878 (954)
49 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 1.4E-23 3.1E-28 215.2 31.0 309 137-510 55-368 (370)
50 TIGR03235 DNA_S_dndA cysteine 99.9 6.5E-24 1.4E-28 216.5 28.1 288 96-429 1-301 (353)
51 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.9E-23 4.2E-28 213.1 30.6 341 100-507 4-354 (355)
52 COG0436 Aspartate/tyrosine/aro 99.9 3.9E-23 8.5E-28 211.8 29.6 344 97-510 33-391 (393)
53 PRK13479 2-aminoethylphosphona 99.9 9.7E-23 2.1E-27 209.1 29.3 349 99-511 9-364 (368)
54 COG0075 Serine-pyruvate aminot 99.9 1.1E-22 2.4E-27 202.5 27.3 326 126-513 31-366 (383)
55 PLN02721 threonine aldolase 99.9 7.2E-23 1.6E-27 208.8 26.8 305 127-509 38-351 (353)
56 COG2008 GLY1 Threonine aldolas 99.9 7.9E-23 1.7E-27 197.6 24.2 308 120-508 26-341 (342)
57 PTZ00094 serine hydroxymethylt 99.9 1.3E-22 2.8E-27 213.0 27.5 340 96-510 36-408 (452)
58 PLN02724 Molybdenum cofactor s 99.9 3.1E-22 6.7E-27 223.1 29.5 309 94-431 35-394 (805)
59 cd06502 TA_like Low-specificit 99.9 1.6E-22 3.5E-27 205.0 24.1 295 135-506 34-337 (338)
60 cd00609 AAT_like Aspartate ami 99.9 6.7E-22 1.5E-26 200.8 28.7 318 116-505 23-349 (350)
61 PRK08361 aspartate aminotransf 99.9 4.7E-22 1E-26 205.7 27.6 331 107-510 48-390 (391)
62 PRK06108 aspartate aminotransf 99.9 6.7E-22 1.5E-26 203.9 28.4 329 107-509 39-381 (382)
63 TIGR01822 2am3keto_CoA 2-amino 99.9 2.2E-21 4.8E-26 200.9 32.2 300 132-511 82-390 (393)
64 PRK03080 phosphoserine aminotr 99.9 2.8E-22 6.1E-27 205.8 24.7 343 98-513 15-376 (378)
65 PRK07179 hypothetical protein; 99.9 1.8E-21 3.8E-26 202.4 30.4 292 129-510 99-398 (407)
66 COG0156 BioF 7-keto-8-aminopel 99.9 1.6E-21 3.4E-26 196.1 27.9 337 87-507 40-387 (388)
67 PRK05764 aspartate aminotransf 99.9 3.1E-21 6.6E-26 199.8 30.7 334 108-510 47-391 (393)
68 cd06454 KBL_like KBL_like; thi 99.9 1.6E-20 3.4E-25 191.2 30.8 299 131-507 44-348 (349)
69 PTZ00377 alanine aminotransfer 99.9 5.1E-20 1.1E-24 195.1 34.9 339 122-516 108-481 (481)
70 TIGR01437 selA_rel uncharacter 99.9 1.4E-20 3E-25 192.0 28.8 319 104-507 23-362 (363)
71 PRK06207 aspartate aminotransf 99.9 3.3E-20 7.2E-25 192.4 32.0 331 109-511 57-403 (405)
72 KOG1368 Threonine aldolase [Am 99.9 1.1E-21 2.3E-26 182.6 18.2 309 122-506 49-364 (384)
73 PRK13580 serine hydroxymethylt 99.9 9.2E-21 2E-25 194.9 26.8 326 125-510 87-445 (493)
74 PRK07324 transaminase; Validat 99.9 1.5E-20 3.2E-25 193.0 28.4 319 112-510 45-370 (373)
75 PTZ00433 tyrosine aminotransfe 99.9 7.2E-20 1.6E-24 190.5 33.7 356 93-511 32-409 (412)
76 PLN00145 tyrosine/nicotianamin 99.9 2.3E-20 5E-25 194.7 29.8 341 108-513 72-427 (430)
77 PLN02656 tyrosine transaminase 99.9 1E-19 2.2E-24 189.2 33.2 340 105-511 48-404 (409)
78 PRK07682 hypothetical protein; 99.9 2.1E-20 4.5E-25 192.5 27.4 327 110-510 38-376 (378)
79 PLN02483 serine palmitoyltrans 99.9 8.6E-20 1.9E-24 192.7 32.1 342 89-512 103-468 (489)
80 PRK06939 2-amino-3-ketobutyrat 99.9 1.4E-19 3E-24 187.6 33.1 303 130-511 84-394 (397)
81 cd00611 PSAT_like Phosphoserin 99.9 3.4E-21 7.5E-26 196.2 20.6 337 98-507 2-353 (355)
82 cd00378 SHMT Serine-glycine hy 99.9 1.4E-20 2.9E-25 195.5 25.5 342 95-509 20-384 (402)
83 PLN00175 aminotransferase fami 99.9 3.9E-20 8.4E-25 192.2 28.8 329 107-509 69-412 (413)
84 PLN02187 rooty/superroot1 99.9 2E-19 4.3E-24 189.1 34.3 344 107-514 85-442 (462)
85 PLN02822 serine palmitoyltrans 99.9 4.7E-19 1E-23 186.7 36.4 337 107-513 125-480 (481)
86 PRK13355 bifunctional HTH-doma 99.9 1E-19 2.2E-24 194.5 31.1 333 107-510 164-514 (517)
87 PLN02231 alanine transaminase 99.9 4.6E-19 1E-23 188.4 35.7 338 122-516 161-533 (534)
88 PRK07681 aspartate aminotransf 99.9 1.5E-19 3.3E-24 187.3 30.8 328 106-507 46-385 (399)
89 cd00616 AHBA_syn 3-amino-5-hyd 99.9 4.6E-20 9.9E-25 188.0 26.2 307 126-505 15-352 (352)
90 PRK05957 aspartate aminotransf 99.9 1.7E-19 3.7E-24 186.3 30.3 334 106-512 41-387 (389)
91 PLN00143 tyrosine/nicotianamin 99.9 3E-19 6.5E-24 185.6 32.1 347 105-513 49-407 (409)
92 PRK00011 glyA serine hydroxyme 99.9 5.3E-20 1.2E-24 191.9 26.3 307 128-509 66-388 (416)
93 PRK05937 8-amino-7-oxononanoat 99.9 1.9E-19 4.2E-24 184.6 29.7 338 88-512 6-352 (370)
94 COG1168 MalY Bifunctional PLP- 99.9 1.9E-19 4.2E-24 174.5 27.7 335 105-510 38-386 (388)
95 PRK13034 serine hydroxymethylt 99.9 9.8E-20 2.1E-24 189.0 27.0 307 128-509 69-391 (416)
96 TIGR01265 tyr_nico_aTase tyros 99.9 1.1E-18 2.4E-23 181.1 34.7 342 107-510 50-401 (403)
97 PRK06225 aspartate aminotransf 99.9 1.6E-19 3.5E-24 186.0 28.0 327 107-513 43-379 (380)
98 PRK08912 hypothetical protein; 99.9 5.3E-19 1.1E-23 182.7 31.0 314 123-509 57-385 (387)
99 PLN03226 serine hydroxymethylt 99.9 1.4E-19 3E-24 189.6 26.8 352 97-510 37-419 (475)
100 PRK05958 8-amino-7-oxononanoat 99.9 4.2E-19 9E-24 183.2 29.6 294 132-507 83-384 (385)
101 PRK08363 alanine aminotransfer 99.9 5.6E-19 1.2E-23 183.1 30.5 334 107-510 48-394 (398)
102 PRK07777 aminotransferase; Val 99.9 4.1E-19 8.9E-24 183.5 29.1 326 111-508 43-384 (387)
103 TIGR01821 5aminolev_synth 5-am 99.9 5.9E-19 1.3E-23 183.2 30.3 297 134-511 91-397 (402)
104 PRK05355 3-phosphoserine/phosp 99.9 3.1E-20 6.7E-25 188.9 20.3 335 99-509 7-357 (360)
105 PRK12414 putative aminotransfe 99.9 2.9E-19 6.3E-24 184.3 27.5 328 107-506 44-383 (384)
106 PRK08960 hypothetical protein; 99.9 4.4E-19 9.6E-24 183.2 28.9 328 106-508 46-385 (387)
107 cd00615 Orn_deC_like Ornithine 99.9 3.4E-20 7.5E-25 184.0 19.7 228 136-409 62-294 (294)
108 PRK05942 aspartate aminotransf 99.9 8.2E-19 1.8E-23 181.6 30.6 313 122-506 66-388 (394)
109 PLN02414 glycine dehydrogenase 99.9 6.6E-19 1.4E-23 195.4 31.5 367 55-506 68-465 (993)
110 PRK09082 methionine aminotrans 99.8 2.2E-19 4.7E-24 185.4 25.8 325 108-506 46-385 (386)
111 PRK06107 aspartate aminotransf 99.8 5.6E-19 1.2E-23 183.3 28.6 342 108-511 49-401 (402)
112 PRK13392 5-aminolevulinate syn 99.8 8.9E-19 1.9E-23 182.3 30.2 296 136-511 94-398 (410)
113 PRK06290 aspartate aminotransf 99.8 1.1E-18 2.5E-23 180.9 30.7 338 108-512 60-407 (410)
114 PRK05367 glycine dehydrogenase 99.8 1.1E-18 2.3E-23 194.7 32.4 365 54-505 42-437 (954)
115 PLN02376 1-aminocyclopropane-1 99.8 9.5E-19 2.1E-23 184.9 30.5 325 124-511 89-439 (496)
116 PRK07309 aromatic amino acid a 99.8 1.6E-18 3.5E-23 179.2 30.7 335 107-511 45-389 (391)
117 PRK06348 aspartate aminotransf 99.8 1E-18 2.2E-23 180.3 29.1 326 107-507 45-382 (384)
118 TIGR03537 DapC succinyldiamino 99.8 1.1E-18 2.4E-23 177.7 29.2 323 109-506 17-349 (350)
119 TIGR01264 tyr_amTase_E tyrosin 99.8 2.1E-18 4.7E-23 178.9 31.6 340 106-510 49-399 (401)
120 TIGR01141 hisC histidinol-phos 99.8 8.6E-19 1.9E-23 178.3 28.0 284 137-505 58-346 (346)
121 PRK07550 hypothetical protein; 99.8 1.7E-18 3.6E-23 178.9 30.1 329 107-507 44-384 (386)
122 PRK07568 aspartate aminotransf 99.8 2.9E-18 6.3E-23 177.8 31.9 333 107-512 45-394 (397)
123 PRK09265 aminotransferase AlaT 99.8 1.8E-18 4E-23 179.6 30.4 318 123-510 66-401 (404)
124 PF00155 Aminotran_1_2: Aminot 99.8 2.9E-19 6.3E-24 183.0 24.0 318 121-504 36-363 (363)
125 TIGR03540 DapC_direct LL-diami 99.8 2.2E-18 4.7E-23 177.9 30.4 328 107-506 44-382 (383)
126 PRK13238 tnaA tryptophanase/L- 99.8 3.1E-18 6.8E-23 179.0 31.7 371 71-510 22-433 (460)
127 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 4.6E-20 1E-24 186.6 17.3 288 76-419 3-329 (417)
128 PRK09064 5-aminolevulinate syn 99.8 1.7E-18 3.6E-23 180.1 29.1 297 134-511 92-398 (407)
129 PRK07337 aminotransferase; Val 99.8 2.3E-18 4.9E-23 178.0 29.7 329 107-507 45-386 (388)
130 TIGR01825 gly_Cac_T_rel pyrido 99.8 3.4E-18 7.4E-23 176.5 30.7 305 124-510 69-381 (385)
131 COG1103 Archaea-specific pyrid 99.8 3.6E-18 7.9E-23 157.1 26.9 302 140-510 68-380 (382)
132 PRK14807 histidinol-phosphate 99.8 5E-18 1.1E-22 173.0 31.2 288 130-507 60-349 (351)
133 COG0399 WecE Predicted pyridox 99.8 1.6E-18 3.4E-23 173.1 26.7 334 108-509 15-372 (374)
134 PLN02955 8-amino-7-oxononanoat 99.8 2.2E-18 4.7E-23 177.4 28.4 308 130-512 144-463 (476)
135 PLN02450 1-aminocyclopropane-1 99.8 3.4E-18 7.4E-23 180.0 30.1 327 125-512 82-432 (468)
136 KOG2862 Alanine-glyoxylate ami 99.8 2.3E-18 4.9E-23 161.5 25.2 346 99-510 21-382 (385)
137 PRK08068 transaminase; Reviewe 99.8 3.8E-18 8.3E-23 176.3 29.7 323 109-506 49-385 (389)
138 PRK08056 threonine-phosphate d 99.8 5.4E-18 1.2E-22 173.1 30.3 289 136-508 58-353 (356)
139 PRK06358 threonine-phosphate d 99.8 6.5E-18 1.4E-22 172.3 30.6 310 107-508 34-353 (354)
140 PRK07683 aminotransferase A; V 99.8 6E-18 1.3E-22 174.7 30.2 328 107-509 43-382 (387)
141 TIGR01364 serC_1 phosphoserine 99.8 4.8E-19 1.1E-23 179.3 21.5 307 128-509 32-347 (349)
142 TIGR01366 serC_3 phosphoserine 99.8 7E-19 1.5E-23 179.3 22.8 309 127-511 35-361 (361)
143 PLN03227 serine palmitoyltrans 99.8 1.4E-17 3.1E-22 171.6 32.7 311 128-512 42-384 (392)
144 PRK15029 arginine decarboxylas 99.8 5.4E-18 1.2E-22 183.4 30.6 175 137-334 209-402 (755)
145 KOG0259 Tyrosine aminotransfer 99.8 5.6E-18 1.2E-22 163.1 27.0 382 71-512 42-435 (447)
146 PRK09276 LL-diaminopimelate am 99.8 5E-18 1.1E-22 175.2 29.1 326 107-506 46-384 (385)
147 PRK09147 succinyldiaminopimela 99.8 6.6E-18 1.4E-22 175.0 29.7 327 107-508 44-394 (396)
148 PRK06855 aminotransferase; Val 99.8 1.1E-17 2.4E-22 174.9 31.6 360 105-512 48-431 (433)
149 PRK05387 histidinol-phosphate 99.8 8E-18 1.7E-22 171.7 29.5 310 108-509 40-352 (353)
150 PRK11658 UDP-4-amino-4-deoxy-L 99.8 2.7E-18 5.9E-23 176.4 25.9 318 127-508 31-377 (379)
151 PRK13393 5-aminolevulinate syn 99.8 1.4E-17 3E-22 173.1 31.5 298 134-511 91-397 (406)
152 PRK06836 aspartate aminotransf 99.8 1.9E-17 4.1E-22 171.4 32.0 332 106-510 47-391 (394)
153 TIGR00858 bioF 8-amino-7-oxono 99.8 8.5E-18 1.8E-22 171.7 29.0 290 134-505 62-360 (360)
154 TIGR03588 PseC UDP-4-keto-6-de 99.8 7.1E-18 1.5E-22 173.7 28.3 335 111-507 13-379 (380)
155 PRK08636 aspartate aminotransf 99.8 2.2E-17 4.7E-22 171.4 31.6 340 107-510 49-400 (403)
156 PRK07366 succinyldiaminopimela 99.8 1.5E-17 3.2E-22 172.0 28.8 328 107-507 45-387 (388)
157 PRK00950 histidinol-phosphate 99.8 1.1E-17 2.4E-22 171.1 27.7 283 137-508 73-360 (361)
158 PRK04870 histidinol-phosphate 99.8 1.6E-17 3.5E-22 169.6 28.8 312 105-507 39-355 (356)
159 cd00614 CGS_like CGS_like: Cys 99.8 3.8E-18 8.2E-23 174.8 24.1 234 127-430 38-294 (369)
160 PRK10534 L-threonine aldolase; 99.8 4.1E-18 8.8E-23 172.4 23.9 311 106-508 13-331 (333)
161 PLN02607 1-aminocyclopropane-1 99.8 2.7E-17 5.9E-22 172.0 30.6 324 128-512 94-439 (447)
162 PRK01688 histidinol-phosphate 99.8 2.5E-18 5.5E-23 175.1 22.3 283 136-505 60-351 (351)
163 TIGR03538 DapC_gpp succinyldia 99.8 3.1E-17 6.7E-22 169.8 30.3 327 105-507 41-392 (393)
164 COG1003 GcvP Glycine cleavage 99.8 3.3E-17 7.2E-22 160.5 28.2 327 128-514 104-451 (496)
165 PRK06767 methionine gamma-lyas 99.8 1.3E-17 2.8E-22 171.6 26.6 234 127-430 59-309 (386)
166 PRK03158 histidinol-phosphate 99.8 2.5E-17 5.4E-22 168.4 28.5 306 110-507 47-358 (359)
167 PRK08861 cystathionine gamma-s 99.8 2.4E-17 5.2E-22 168.7 27.6 235 126-430 50-307 (388)
168 PRK05968 hypothetical protein; 99.8 1.5E-17 3.3E-22 171.1 26.3 231 128-429 62-310 (389)
169 PRK02731 histidinol-phosphate 99.8 3.3E-17 7.1E-22 168.1 28.6 288 138-509 72-365 (367)
170 PRK15481 transcriptional regul 99.8 3.2E-17 6.9E-22 171.7 28.9 302 124-508 116-429 (431)
171 PRK08133 O-succinylhomoserine 99.8 3.1E-17 6.7E-22 168.9 28.1 234 127-430 59-314 (390)
172 TIGR01328 met_gam_lyase methio 99.8 1.8E-17 4E-22 170.5 26.1 235 127-430 57-314 (391)
173 KOG0257 Kynurenine aminotransf 99.8 2.8E-18 6.1E-23 168.0 18.3 307 75-428 18-343 (420)
174 PRK07504 O-succinylhomoserine 99.8 4.3E-17 9.4E-22 168.1 28.3 235 127-430 63-319 (398)
175 PRK09148 aminotransferase; Val 99.8 1E-16 2.2E-21 166.5 30.9 333 109-512 47-392 (405)
176 PRK08134 O-acetylhomoserine am 99.8 4.6E-17 1E-21 169.0 28.1 241 127-416 62-319 (433)
177 cd00617 Tnase_like Tryptophana 99.8 3.3E-17 7.1E-22 169.1 26.6 349 96-510 22-408 (431)
178 PRK04635 histidinol-phosphate 99.8 1.6E-17 3.4E-22 169.5 23.8 283 131-506 62-351 (354)
179 PRK05166 histidinol-phosphate 99.8 7.6E-17 1.6E-21 165.5 28.9 288 137-508 75-369 (371)
180 PRK03317 histidinol-phosphate 99.8 1.4E-16 3E-21 163.5 30.5 316 106-509 40-363 (368)
181 TIGR01329 cysta_beta_ly_E cyst 99.8 2.9E-17 6.4E-22 168.3 25.4 212 136-414 50-267 (378)
182 PRK07908 hypothetical protein; 99.8 7E-17 1.5E-21 164.4 27.9 305 104-508 34-345 (349)
183 TIGR03576 pyridox_MJ0158 pyrid 99.8 1.1E-16 2.3E-21 162.0 28.5 331 72-507 6-344 (346)
184 PF01041 DegT_DnrJ_EryC1: DegT 99.8 6.2E-17 1.3E-21 165.5 27.0 320 112-505 9-363 (363)
185 PLN02509 cystathionine beta-ly 99.8 4.5E-17 9.7E-22 169.5 25.9 215 134-415 134-354 (464)
186 PRK05613 O-acetylhomoserine am 99.8 7.1E-17 1.5E-21 167.4 27.3 241 127-415 67-327 (437)
187 PLN03026 histidinol-phosphate 99.8 9.4E-17 2E-21 165.2 27.5 287 137-507 90-379 (380)
188 PRK07811 cystathionine gamma-s 99.8 6.1E-17 1.3E-21 166.6 26.1 234 127-430 59-315 (388)
189 PRK08776 cystathionine gamma-s 99.8 1.2E-16 2.6E-21 164.9 28.0 219 127-415 58-282 (405)
190 PRK07812 O-acetylhomoserine am 99.8 6.4E-17 1.4E-21 167.7 25.8 241 128-416 68-323 (436)
191 PLN02242 methionine gamma-lyas 99.8 1.5E-16 3.2E-21 164.7 28.4 223 127-417 74-303 (418)
192 PRK08114 cystathionine beta-ly 99.8 7.4E-17 1.6E-21 164.5 25.5 234 126-430 59-317 (395)
193 TIGR01324 cysta_beta_ly_B cyst 99.8 5.9E-17 1.3E-21 165.6 24.8 234 126-430 47-303 (377)
194 PRK08175 aminotransferase; Val 99.8 4.7E-16 1E-20 161.0 31.9 320 121-510 59-389 (395)
195 PLN02271 serine hydroxymethylt 99.8 9.2E-17 2E-21 166.0 26.1 356 96-509 150-539 (586)
196 PRK07050 cystathionine beta-ly 99.8 1.1E-16 2.4E-21 164.8 26.8 220 127-416 63-288 (394)
197 PRK08045 cystathionine gamma-s 99.8 9.8E-17 2.1E-21 164.6 26.0 223 127-416 50-275 (386)
198 PLN02368 alanine transaminase 99.8 1.5E-16 3.3E-21 164.2 27.4 281 106-427 82-393 (407)
199 PRK09028 cystathionine beta-ly 99.8 1.6E-16 3.4E-21 162.6 27.0 232 127-429 59-313 (394)
200 PRK09105 putative aminotransfe 99.8 3.1E-16 6.7E-21 160.7 29.4 280 138-508 83-368 (370)
201 PLN02672 methionine S-methyltr 99.8 2.3E-16 5E-21 175.7 30.4 348 104-509 709-1079(1082)
202 PRK02610 histidinol-phosphate 99.8 3.6E-16 7.8E-21 160.7 29.7 318 107-510 43-371 (374)
203 PRK08249 cystathionine gamma-s 99.8 2.1E-16 4.5E-21 162.9 27.9 221 126-416 61-286 (398)
204 PRK15400 lysine decarboxylase 99.8 1.4E-16 3E-21 170.7 27.4 316 137-509 199-558 (714)
205 PRK08153 histidinol-phosphate 99.8 3.7E-16 7.9E-21 160.3 29.4 295 131-512 69-367 (369)
206 PF02347 GDC-P: Glycine cleava 99.8 1.9E-16 4.2E-21 160.2 26.6 371 52-504 29-429 (429)
207 PRK15399 lysine decarboxylase 99.8 4.9E-16 1.1E-20 166.5 31.2 315 138-509 200-558 (713)
208 PRK01533 histidinol-phosphate 99.8 1.6E-16 3.6E-21 162.4 26.4 307 107-512 44-357 (366)
209 PRK08248 O-acetylhomoserine am 99.8 1.8E-16 3.9E-21 164.6 26.6 241 127-416 62-319 (431)
210 PRK08064 cystathionine beta-ly 99.8 1.5E-16 3.2E-21 163.9 25.5 217 127-414 52-274 (390)
211 PRK08574 cystathionine gamma-s 99.8 1.7E-16 3.7E-21 162.9 25.7 218 126-414 50-273 (385)
212 PRK05994 O-acetylhomoserine am 99.8 3E-16 6.6E-21 163.1 27.6 238 128-416 62-318 (427)
213 PRK13578 ornithine decarboxyla 99.8 6.2E-16 1.3E-20 165.9 30.4 232 137-417 178-446 (720)
214 PRK06234 methionine gamma-lyas 99.8 2.8E-16 6E-21 162.4 26.8 220 127-416 62-290 (400)
215 PRK04781 histidinol-phosphate 99.8 4.7E-16 1E-20 159.1 28.2 290 137-508 63-361 (364)
216 TIGR01140 L_thr_O3P_dcar L-thr 99.8 2.1E-16 4.5E-21 159.6 25.1 273 136-504 50-329 (330)
217 TIGR02080 O_succ_thio_ly O-suc 99.8 3.8E-16 8.2E-21 160.2 26.4 237 127-430 49-305 (382)
218 PRK07810 O-succinylhomoserine 99.8 7.2E-16 1.6E-20 159.1 28.4 235 126-430 67-324 (403)
219 PRK06084 O-acetylhomoserine am 99.8 6.2E-16 1.4E-20 160.4 28.1 241 127-416 56-314 (425)
220 PRK08247 cystathionine gamma-s 99.8 1.5E-16 3.2E-21 162.7 23.1 232 127-429 50-288 (366)
221 PRK03321 putative aminotransfe 99.8 3.9E-16 8.5E-21 159.2 26.2 305 109-508 39-349 (352)
222 PRK07590 L,L-diaminopimelate a 99.7 6.9E-16 1.5E-20 160.5 28.2 356 72-507 16-408 (409)
223 PRK07503 methionine gamma-lyas 99.7 5.9E-16 1.3E-20 160.0 27.2 221 127-416 63-289 (403)
224 TIGR01325 O_suc_HS_sulf O-succ 99.7 5.7E-16 1.2E-20 159.2 26.5 217 128-415 53-275 (380)
225 PRK03244 argD acetylornithine 99.7 2.1E-15 4.5E-20 156.4 31.0 294 136-512 88-396 (398)
226 PRK00854 rocD ornithine--oxo-a 99.7 2.3E-15 5E-20 156.3 31.3 297 136-508 86-399 (401)
227 cd00610 OAT_like Acetyl ornith 99.7 1E-15 2.2E-20 159.6 28.8 316 131-507 77-412 (413)
228 TIGR00461 gcvP glycine dehydro 99.7 2.8E-15 6E-20 164.8 32.5 364 55-505 31-426 (939)
229 PRK06425 histidinol-phosphate 99.7 1.3E-15 2.8E-20 154.0 28.0 277 137-507 44-330 (332)
230 PRK07269 cystathionine gamma-s 99.7 1.9E-16 4.2E-21 161.2 21.9 234 126-429 51-288 (364)
231 TIGR02379 ECA_wecE TDP-4-keto- 99.7 8.6E-16 1.9E-20 157.3 26.7 310 137-508 35-375 (376)
232 PRK15407 lipopolysaccharide bi 99.7 1.5E-15 3.2E-20 158.3 28.6 253 128-412 62-330 (438)
233 PRK07582 cystathionine gamma-l 99.7 4.3E-16 9.2E-21 159.2 23.5 229 127-429 49-300 (366)
234 cd01494 AAT_I Aspartate aminot 99.7 4.8E-17 1E-21 147.2 14.6 166 137-332 4-170 (170)
235 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.7 9.4E-16 2E-20 157.5 25.2 305 135-508 33-374 (375)
236 PRK06176 cystathionine gamma-s 99.7 7.2E-16 1.6E-20 158.0 23.9 220 126-416 47-272 (380)
237 PRK14809 histidinol-phosphate 99.7 4.6E-15 1E-19 151.6 29.9 302 110-508 48-355 (357)
238 PRK05839 hypothetical protein; 99.7 3.7E-15 8.1E-20 153.1 29.2 318 107-509 39-373 (374)
239 PRK05939 hypothetical protein; 99.7 6.3E-16 1.4E-20 159.1 23.4 239 127-415 45-289 (397)
240 PRK07671 cystathionine beta-ly 99.7 1.3E-15 2.8E-20 156.1 25.4 219 127-416 48-272 (377)
241 PTZ00376 aspartate aminotransf 99.7 5.1E-15 1.1E-19 153.7 30.0 327 108-509 50-402 (404)
242 PRK09275 aspartate aminotransf 99.7 2.3E-15 4.9E-20 158.4 27.4 372 105-515 113-522 (527)
243 PF01212 Beta_elim_lyase: Beta 99.7 1.6E-17 3.5E-22 162.8 10.3 263 106-423 8-282 (290)
244 PRK07865 N-succinyldiaminopime 99.7 3.2E-15 6.9E-20 153.2 27.2 308 108-505 43-363 (364)
245 PRK07392 threonine-phosphate d 99.7 1.1E-14 2.4E-19 148.9 31.0 309 108-507 38-356 (360)
246 PRK04073 rocD ornithine--oxo-a 99.7 9.1E-15 2E-19 151.4 30.6 294 134-508 83-395 (396)
247 PRK09257 aromatic amino acid a 99.7 5E-15 1.1E-19 153.4 28.6 326 108-507 47-395 (396)
248 PRK06460 hypothetical protein; 99.7 2.9E-15 6.4E-20 153.5 25.8 234 126-430 42-298 (376)
249 TIGR03801 asp_4_decarbox aspar 99.7 7E-15 1.5E-19 154.5 28.8 366 107-514 109-520 (521)
250 TIGR03539 DapC_actino succinyl 99.7 1.5E-14 3.2E-19 147.8 30.5 308 107-504 36-356 (357)
251 PLN02452 phosphoserine transam 99.7 3.6E-15 7.8E-20 151.2 25.3 340 95-510 7-363 (365)
252 KOG1359 Glycine C-acetyltransf 99.7 2.2E-15 4.7E-20 140.4 21.5 298 130-511 109-413 (417)
253 TIGR01365 serC_2 phosphoserine 99.7 1.5E-15 3.3E-20 154.0 22.1 340 105-509 14-372 (374)
254 COG1167 ARO8 Transcriptional r 99.7 1.5E-14 3.3E-19 151.7 30.3 319 122-512 125-457 (459)
255 PRK06702 O-acetylhomoserine am 99.7 3.3E-15 7.3E-20 154.1 24.8 256 127-430 59-348 (432)
256 PRK04311 selenocysteine syntha 99.7 1.3E-14 2.9E-19 151.0 29.2 194 104-334 96-308 (464)
257 PRK05967 cystathionine beta-ly 99.7 5.1E-15 1.1E-19 151.2 25.0 232 127-429 62-316 (395)
258 TIGR02618 tyr_phenol_ly tyrosi 99.7 2.9E-14 6.3E-19 145.1 30.1 349 95-510 39-426 (450)
259 PRK14808 histidinol-phosphate 99.7 1.4E-14 3E-19 146.6 27.9 298 106-506 33-333 (335)
260 PTZ00125 ornithine aminotransf 99.7 3.8E-14 8.2E-19 147.2 31.7 305 134-511 74-396 (400)
261 PRK07505 hypothetical protein; 99.7 1.9E-14 4.1E-19 149.4 29.3 300 131-510 89-399 (402)
262 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 7E-15 1.5E-19 152.8 26.0 239 127-416 55-311 (418)
263 PRK09440 avtA valine--pyruvate 99.7 1.2E-14 2.6E-19 151.6 28.0 340 107-514 47-415 (416)
264 TIGR03246 arg_catab_astC succi 99.7 5.4E-14 1.2E-18 145.6 31.9 302 135-511 79-396 (397)
265 PRK03967 histidinol-phosphate 99.7 3.2E-14 6.8E-19 144.1 29.5 295 110-509 36-333 (337)
266 PF00464 SHMT: Serine hydroxym 99.7 5.3E-15 1.1E-19 149.4 23.3 337 96-503 22-398 (399)
267 PRK06434 cystathionine gamma-l 99.7 6.5E-15 1.4E-19 150.3 23.9 233 124-429 59-308 (384)
268 PRK08637 hypothetical protein; 99.7 3.4E-14 7.3E-19 146.8 29.2 335 108-511 23-387 (388)
269 KOG0256 1-aminocyclopropane-1- 99.7 1.8E-14 3.8E-19 140.4 24.8 328 128-511 120-462 (471)
270 TIGR00474 selA seryl-tRNA(sec) 99.7 3E-14 6.4E-19 148.1 28.0 164 136-334 125-303 (454)
271 TIGR00707 argD acetylornithine 99.7 6.3E-14 1.4E-18 144.4 30.0 300 133-507 69-378 (379)
272 COG0079 HisC Histidinol-phosph 99.7 1E-13 2.3E-18 139.9 29.9 284 138-509 62-353 (356)
273 COG2873 MET17 O-acetylhomoseri 99.7 1.1E-13 2.3E-18 133.8 27.2 316 122-509 55-424 (426)
274 TIGR01885 Orn_aminotrans ornit 99.7 2.9E-13 6.2E-18 140.5 32.9 305 133-508 79-400 (401)
275 KOG1360 5-aminolevulinate synt 99.7 4.3E-14 9.4E-19 136.8 24.4 299 130-511 217-525 (570)
276 PRK02936 argD acetylornithine 99.7 1E-13 2.2E-18 142.8 28.9 291 131-507 69-376 (377)
277 PRK08354 putative aminotransfe 99.6 5.1E-14 1.1E-18 141.0 25.4 170 108-331 23-196 (311)
278 COG0112 GlyA Glycine/serine hy 99.6 3.3E-14 7E-19 138.8 22.8 256 124-430 63-323 (413)
279 PLN02397 aspartate transaminas 99.6 2.4E-13 5.2E-18 141.8 31.0 323 109-509 70-420 (423)
280 PRK13237 tyrosine phenol-lyase 99.6 1.8E-13 3.9E-18 139.7 29.1 347 95-510 46-433 (460)
281 TIGR03542 DAPAT_plant LL-diami 99.6 1.3E-13 2.8E-18 143.2 28.4 310 124-507 70-401 (402)
282 PRK01278 argD acetylornithine 99.6 2.9E-13 6.2E-18 140.0 30.7 298 135-510 75-388 (389)
283 PRK02627 acetylornithine amino 99.6 3.2E-13 6.9E-18 140.0 30.1 301 132-511 80-395 (396)
284 PF01053 Cys_Met_Meta_PP: Cys/ 99.6 7.3E-14 1.6E-18 142.3 24.6 237 126-431 52-312 (386)
285 COG3844 Kynureninase [Amino ac 99.6 5.3E-14 1.1E-18 133.3 21.7 311 131-511 74-403 (407)
286 PLN02624 ornithine-delta-amino 99.6 9.3E-13 2E-17 138.9 33.1 310 133-511 117-445 (474)
287 PRK05093 argD bifunctional N-s 99.6 9.8E-13 2.1E-17 136.6 32.7 301 136-511 85-401 (403)
288 PRK12462 phosphoserine aminotr 99.6 8.7E-14 1.9E-18 139.7 23.5 340 96-510 5-362 (364)
289 COG0403 GcvP Glycine cleavage 99.6 1.8E-12 3.8E-17 127.8 31.5 360 69-507 55-447 (450)
290 PRK05664 threonine-phosphate d 99.6 5.4E-13 1.2E-17 134.8 27.5 268 138-510 54-328 (330)
291 KOG1357 Serine palmitoyltransf 99.6 4E-14 8.7E-19 139.4 18.2 342 92-511 142-503 (519)
292 PRK06959 putative threonine-ph 99.6 7E-13 1.5E-17 134.3 27.5 274 136-513 56-336 (339)
293 PRK12381 bifunctional succinyl 99.6 1.2E-12 2.6E-17 135.9 29.3 304 135-514 83-403 (406)
294 PRK07049 methionine gamma-lyas 99.6 1.6E-12 3.4E-17 135.3 28.6 225 127-416 81-317 (427)
295 PRK04260 acetylornithine amino 99.6 4.6E-12 9.9E-17 130.4 29.8 294 130-507 67-374 (375)
296 PRK03715 argD acetylornithine 99.6 4.3E-12 9.2E-17 131.0 29.2 308 131-511 76-394 (395)
297 PRK05964 adenosylmethionine--8 99.6 5.2E-12 1.1E-16 131.8 30.1 320 132-511 84-423 (423)
298 KOG0630 Predicted pyridoxal-de 99.5 1.4E-13 3E-18 136.2 16.0 205 191-417 230-440 (838)
299 PRK11522 putrescine--2-oxoglut 99.5 2E-11 4.3E-16 128.0 31.8 316 132-515 123-456 (459)
300 PF05889 SLA_LP_auto_ag: Solub 99.5 2.3E-12 4.9E-17 127.7 21.4 312 132-509 55-389 (389)
301 KOG0634 Aromatic amino acid am 99.5 5.1E-11 1.1E-15 117.5 30.0 331 123-510 94-466 (472)
302 PRK09264 diaminobutyrate--2-ox 99.5 3.3E-11 7.1E-16 125.8 30.8 317 132-513 81-419 (425)
303 PRK12566 glycine dehydrogenase 99.5 2.5E-11 5.4E-16 133.1 30.5 363 54-505 45-439 (954)
304 PRK08117 4-aminobutyrate amino 99.5 6.6E-11 1.4E-15 123.9 32.2 319 132-513 85-432 (433)
305 COG0626 MetC Cystathionine bet 99.5 2.5E-11 5.4E-16 122.4 26.7 236 126-430 60-319 (396)
306 COG1982 LdcC Arginine/lysine/o 99.5 9.2E-12 2E-16 128.8 23.7 234 137-419 74-321 (557)
307 TIGR03372 putres_am_tran putre 99.5 1.1E-10 2.4E-15 121.5 31.8 307 132-507 116-441 (442)
308 PLN02760 4-aminobutyrate:pyruv 99.5 1.1E-10 2.5E-15 123.5 31.9 335 132-512 132-493 (504)
309 TIGR00713 hemL glutamate-1-sem 99.4 3.1E-11 6.8E-16 126.2 26.2 309 136-510 91-422 (423)
310 KOG0258 Alanine aminotransfera 99.4 2.5E-10 5.5E-15 110.9 30.0 357 113-515 97-474 (475)
311 COG4992 ArgD Ornithine/acetylo 99.4 8.7E-11 1.9E-15 116.7 26.9 302 133-513 84-401 (404)
312 PRK08088 4-aminobutyrate amino 99.4 2.1E-10 4.6E-15 119.9 31.5 314 135-511 86-424 (425)
313 PRK12403 putative aminotransfe 99.4 5.6E-10 1.2E-14 117.4 34.3 333 132-516 97-458 (460)
314 PRK04612 argD acetylornithine 99.4 4.7E-10 1E-14 116.2 33.2 309 132-513 81-406 (408)
315 TIGR02407 ectoine_ectB diamino 99.4 2.4E-10 5.1E-15 118.8 30.4 313 132-509 77-411 (412)
316 TIGR00700 GABAtrnsam 4-aminobu 99.4 4.4E-10 9.6E-15 117.2 32.3 310 135-508 78-418 (420)
317 PRK06541 hypothetical protein; 99.4 5.7E-10 1.2E-14 117.2 33.1 332 133-513 95-458 (460)
318 PRK08360 4-aminobutyrate amino 99.4 7.2E-10 1.6E-14 116.0 33.8 321 132-513 83-429 (443)
319 PRK05769 4-aminobutyrate amino 99.4 1.1E-09 2.3E-14 114.7 34.5 315 132-511 96-440 (441)
320 KOG2040 Glycine dehydrogenase 99.4 3.9E-11 8.4E-16 122.8 22.6 330 127-512 576-920 (1001)
321 PRK06058 4-aminobutyrate amino 99.4 8E-10 1.7E-14 116.0 32.8 318 132-510 98-442 (443)
322 COG0160 GabT 4-aminobutyrate a 99.4 6.6E-10 1.4E-14 113.6 30.4 320 134-511 100-446 (447)
323 TIGR02617 tnaA_trp_ase tryptop 99.4 2.8E-10 6.1E-15 115.1 26.6 352 94-510 41-441 (467)
324 PLN00144 acetylornithine trans 99.4 9.2E-10 2E-14 113.3 30.7 303 132-511 56-381 (382)
325 PRK06062 hypothetical protein; 99.4 1.2E-09 2.5E-14 114.7 31.7 322 132-513 94-448 (451)
326 PRK06105 aminotransferase; Pro 99.4 1.4E-09 3E-14 114.4 32.0 335 132-513 91-452 (460)
327 PRK09221 beta alanine--pyruvat 99.4 9E-10 1.9E-14 115.3 30.2 326 133-511 92-444 (445)
328 PRK05639 4-aminobutyrate amino 99.4 1.1E-09 2.3E-14 115.0 30.5 319 133-512 96-445 (457)
329 KOG0053 Cystathionine beta-lya 99.4 1.6E-10 3.5E-15 115.2 22.5 218 128-415 76-299 (409)
330 COG0001 HemL Glutamate-1-semia 99.4 7.4E-10 1.6E-14 111.3 27.2 341 93-513 63-431 (432)
331 PRK00062 glutamate-1-semialdeh 99.3 6.8E-10 1.5E-14 116.0 27.3 314 132-511 89-425 (426)
332 PRK13360 omega amino acid--pyr 99.3 2E-09 4.2E-14 112.7 30.7 326 133-511 89-441 (442)
333 PRK06777 4-aminobutyrate amino 99.3 3.4E-09 7.4E-14 110.5 32.3 315 134-508 84-419 (421)
334 TIGR00709 dat 2,4-diaminobutyr 99.3 3.1E-09 6.6E-14 111.5 32.1 332 132-516 81-441 (442)
335 PRK05965 hypothetical protein; 99.3 4E-09 8.6E-14 110.9 32.1 338 132-515 89-452 (459)
336 PRK06082 4-aminobutyrate amino 99.3 3.7E-09 8E-14 111.1 31.7 319 132-516 112-457 (459)
337 PRK06173 adenosylmethionine--8 99.3 3.9E-09 8.4E-14 110.0 31.4 318 133-513 87-428 (429)
338 PRK08593 4-aminobutyrate amino 99.3 1.1E-08 2.4E-13 107.2 34.9 322 132-513 84-432 (445)
339 PRK07495 4-aminobutyrate amino 99.3 1.4E-08 3E-13 105.9 35.3 320 132-513 82-424 (425)
340 PRK07678 aminotransferase; Val 99.3 8.5E-09 1.8E-13 108.3 33.9 328 133-511 89-450 (451)
341 COG3977 Alanine-alpha-ketoisov 99.3 7.5E-10 1.6E-14 104.2 22.4 333 110-514 54-415 (417)
342 PRK06918 4-aminobutyrate amino 99.3 7.1E-09 1.5E-13 109.1 32.4 326 132-516 96-449 (451)
343 PLN02482 glutamate-1-semialdeh 99.3 2.1E-09 4.5E-14 113.0 27.9 313 131-510 137-473 (474)
344 PRK07480 putative aminotransfe 99.3 5.1E-09 1.1E-13 109.9 30.8 333 132-515 93-453 (456)
345 PRK07482 hypothetical protein; 99.3 1.3E-08 2.8E-13 107.2 33.5 336 132-514 93-458 (461)
346 TIGR00508 bioA adenosylmethion 99.3 3.8E-09 8.2E-14 110.2 29.3 311 135-509 90-425 (427)
347 PRK04013 argD acetylornithine/ 99.3 4E-09 8.6E-14 107.4 28.5 278 137-512 70-362 (364)
348 PRK07036 hypothetical protein; 99.3 1.2E-08 2.6E-13 107.4 33.0 329 132-514 94-456 (466)
349 PRK00615 glutamate-1-semialdeh 99.3 3E-09 6.4E-14 110.8 27.9 323 132-512 92-430 (433)
350 PRK12389 glutamate-1-semialdeh 99.3 9E-09 1.9E-13 107.6 31.0 310 132-510 92-427 (428)
351 KOG1358 Serine palmitoyltransf 99.3 7.6E-10 1.6E-14 107.8 20.7 304 140-511 146-466 (467)
352 PRK09792 4-aminobutyrate trans 99.3 1.1E-08 2.4E-13 106.6 31.2 312 132-509 82-420 (421)
353 PRK06943 adenosylmethionine--8 99.3 2.2E-08 4.7E-13 105.1 33.4 323 133-514 97-450 (453)
354 PRK07483 hypothetical protein; 99.2 3.8E-08 8.3E-13 103.0 34.0 336 132-515 72-442 (443)
355 PRK06917 hypothetical protein; 99.2 5.4E-08 1.2E-12 102.1 34.6 338 132-515 73-442 (447)
356 PRK07986 adenosylmethionine--8 99.2 1.5E-08 3.3E-13 105.5 30.2 315 132-509 85-422 (428)
357 PRK07481 hypothetical protein; 99.2 2.2E-08 4.7E-13 105.2 31.6 336 132-511 85-446 (449)
358 PRK06149 hypothetical protein; 99.2 1.3E-08 2.7E-13 116.5 31.5 321 133-510 624-970 (972)
359 PRK07030 adenosylmethionine--8 99.2 3.3E-08 7.1E-13 104.1 32.2 328 132-511 89-447 (466)
360 PRK06916 adenosylmethionine--8 99.2 2.6E-08 5.5E-13 104.9 29.3 333 132-512 98-457 (460)
361 PRK08742 adenosylmethionine--8 99.2 1E-07 2.2E-12 100.4 32.7 331 133-512 107-469 (472)
362 TIGR00699 GABAtrns_euk 4-amino 99.2 4.2E-08 9E-13 102.6 29.1 312 129-507 101-463 (464)
363 PRK06938 diaminobutyrate--2-ox 99.1 1.2E-07 2.7E-12 99.7 32.1 331 133-513 106-463 (464)
364 PRK06931 diaminobutyrate--2-ox 99.1 1.5E-07 3.2E-12 99.0 32.5 330 132-513 100-457 (459)
365 PRK07046 aminotransferase; Val 99.1 4.5E-08 9.9E-13 102.7 28.5 312 131-512 113-452 (453)
366 PRK05630 adenosylmethionine--8 99.1 6.9E-08 1.5E-12 100.5 29.4 310 133-509 83-419 (422)
367 PRK08297 L-lysine aminotransfe 99.1 6.3E-08 1.4E-12 101.4 29.2 311 136-511 95-442 (443)
368 PRK06148 hypothetical protein; 99.1 7.4E-08 1.6E-12 110.4 31.3 324 132-512 662-1012(1013)
369 KOG2467 Glycine/serine hydroxy 99.1 6.8E-08 1.5E-12 93.5 25.7 291 108-433 54-363 (477)
370 COG1932 SerC Phosphoserine ami 99.1 1.8E-08 3.9E-13 98.3 21.7 305 128-510 45-363 (365)
371 PRK06209 glutamate-1-semialdeh 99.1 6E-08 1.3E-12 101.4 26.7 303 132-512 87-407 (431)
372 TIGR03251 LAT_fam L-lysine 6-t 99.1 1.6E-07 3.4E-12 98.3 28.7 291 159-506 105-430 (431)
373 KOG1404 Alanine-glyoxylate ami 99.1 3.6E-07 7.8E-12 89.5 28.7 288 159-504 111-432 (442)
374 KOG0633 Histidinol phosphate a 99.0 3E-08 6.5E-13 91.7 16.5 252 193-506 112-373 (375)
375 COG0161 BioA Adenosylmethionin 99.0 7.5E-07 1.6E-11 90.9 27.6 322 138-514 92-447 (449)
376 KOG1401 Acetylornithine aminot 98.9 1.8E-06 3.9E-11 85.3 27.6 224 159-412 118-354 (433)
377 KOG1402 Ornithine aminotransfe 98.9 1.4E-06 3E-11 83.5 24.3 304 133-508 101-425 (427)
378 PLN02974 adenosylmethionine-8- 98.8 1.1E-05 2.4E-10 89.7 31.8 234 235-508 567-816 (817)
379 COG1921 SelA Selenocysteine sy 98.8 5E-07 1.1E-11 90.1 18.7 148 159-334 85-238 (395)
380 KOG3846 L-kynurenine hydrolase 98.8 1.3E-06 2.9E-11 82.8 19.7 323 135-512 113-463 (465)
381 COG1448 TyrB Aspartate/tyrosin 98.8 4.9E-06 1.1E-10 81.9 24.4 281 159-507 96-395 (396)
382 PF00202 Aminotran_3: Aminotra 98.7 4.2E-06 9.1E-11 84.8 23.1 189 132-334 58-262 (339)
383 COG3033 TnaA Tryptophanase [Am 98.6 8.7E-06 1.9E-10 79.1 21.8 336 123-510 73-444 (471)
384 PF12897 Aminotran_MocR: Alani 98.6 2.6E-05 5.7E-10 77.1 25.3 304 137-509 73-414 (425)
385 KOG3843 Predicted serine hydro 98.5 3.8E-06 8.3E-11 78.1 14.4 233 131-409 55-295 (432)
386 PF03841 SelA: L-seryl-tRNA se 98.3 7.6E-07 1.6E-11 88.1 4.3 162 137-334 51-228 (367)
387 PF06838 Met_gamma_lyase: Meth 98.1 0.00027 5.8E-09 69.7 19.1 225 140-418 61-303 (403)
388 KOG2790 Phosphoserine aminotra 98.1 0.0011 2.3E-08 62.9 20.9 342 99-509 11-367 (370)
389 KOG2040 Glycine dehydrogenase 98.0 0.0039 8.4E-08 65.4 26.1 367 55-506 85-479 (1001)
390 KOG1412 Aspartate aminotransfe 97.8 0.0056 1.2E-07 58.9 20.7 288 159-512 101-407 (410)
391 KOG1403 Predicted alanine-glyo 97.8 0.0074 1.6E-07 57.7 20.5 302 159-509 104-436 (452)
392 KOG1405 4-aminobutyrate aminot 97.1 0.024 5.3E-07 55.6 15.9 219 233-509 254-482 (484)
393 PF04864 Alliinase_C: Allinase 97.1 0.018 4E-07 56.6 15.0 295 131-507 45-362 (363)
394 COG4100 Cystathionine beta-lya 97.0 0.019 4.2E-07 55.1 13.6 150 140-322 72-237 (416)
395 KOG1411 Aspartate aminotransfe 93.8 0.42 9E-06 47.1 9.4 259 191-508 145-423 (427)
396 PLN02994 1-aminocyclopropane-1 92.9 0.22 4.8E-06 44.1 5.6 63 125-203 88-152 (153)
397 COG0386 BtuE Glutathione perox 75.5 17 0.00036 31.9 7.7 95 219-322 28-134 (162)
398 cd01455 vWA_F11C1-5a_type Von 72.7 8.9 0.00019 35.1 5.7 52 235-286 95-148 (191)
399 PF07071 DUF1341: Protein of u 71.1 28 0.00062 31.9 8.3 69 204-285 136-207 (218)
400 TIGR03679 arCOG00187 arCOG0018 59.8 1.2E+02 0.0025 28.5 10.8 67 203-283 46-115 (218)
401 TIGR03573 WbuX N-acetyl sugar 58.8 2.1E+02 0.0045 28.9 13.3 104 159-291 62-171 (343)
402 PF06506 PrpR_N: Propionate ca 57.8 37 0.00079 30.6 6.8 69 192-284 79-147 (176)
403 COG2515 Acd 1-aminocyclopropan 56.5 1.3E+02 0.0029 29.6 10.5 137 129-291 47-191 (323)
404 COG0108 RibB 3,4-dihydroxy-2-b 52.8 32 0.0007 31.6 5.4 48 236-284 142-189 (203)
405 COG3453 Uncharacterized protei 49.8 64 0.0014 27.1 6.1 77 198-281 43-127 (130)
406 COG0300 DltE Short-chain dehyd 48.6 2E+02 0.0044 27.9 10.5 79 191-277 30-113 (265)
407 cd00951 KDGDH 5-dehydro-4-deox 46.2 39 0.00084 33.3 5.4 62 222-285 10-74 (289)
408 COG0367 AsnB Asparagine syntha 46.2 1.5E+02 0.0032 32.2 10.2 128 131-292 212-349 (542)
409 PRK13397 3-deoxy-7-phosphohept 45.6 1.6E+02 0.0035 28.3 9.2 84 200-293 109-197 (250)
410 PF00926 DHBP_synthase: 3,4-di 45.4 49 0.0011 30.5 5.5 50 234-284 136-185 (194)
411 cd00950 DHDPS Dihydrodipicolin 45.1 31 0.00068 33.7 4.6 58 220-279 8-65 (284)
412 PF00106 adh_short: short chai 44.9 1.8E+02 0.0039 25.1 9.2 55 218-277 53-109 (167)
413 COG0329 DapA Dihydrodipicolina 44.6 30 0.00064 34.3 4.3 56 222-279 14-69 (299)
414 COG1954 GlpP Glycerol-3-phosph 44.6 27 0.00058 31.2 3.4 49 233-292 12-62 (181)
415 TIGR02189 GlrX-like_plant Glut 44.4 1.3E+02 0.0028 24.1 7.4 72 191-272 8-81 (99)
416 cd00952 CHBPH_aldolase Trans-o 44.2 39 0.00084 33.6 5.1 51 229-279 23-73 (309)
417 smart00642 Aamy Alpha-amylase 44.0 42 0.00092 30.0 4.9 29 261-289 64-92 (166)
418 KOG1394 3-oxoacyl-(acyl-carrie 43.5 2.8E+02 0.006 28.2 10.5 85 193-282 260-352 (440)
419 cd01994 Alpha_ANH_like_IV This 43.2 2.7E+02 0.0058 25.6 11.4 103 160-284 3-118 (194)
420 PF01972 SDH_sah: Serine dehyd 43.2 1.1E+02 0.0024 29.7 7.6 74 233-321 76-152 (285)
421 COG2870 RfaE ADP-heptose synth 42.7 84 0.0018 32.3 7.0 97 196-301 95-198 (467)
422 TIGR01361 DAHP_synth_Bsub phos 42.6 1.9E+02 0.0041 28.0 9.5 82 201-292 120-206 (260)
423 PRK03170 dihydrodipicolinate s 42.2 38 0.00082 33.3 4.7 58 220-279 9-66 (292)
424 TIGR01536 asn_synth_AEB aspara 41.8 4.4E+02 0.0095 27.8 13.0 122 131-287 235-363 (467)
425 TIGR00674 dapA dihydrodipicoli 41.4 44 0.00096 32.8 5.0 59 219-279 5-63 (285)
426 TIGR01244 conserved hypothetic 41.2 81 0.0017 27.0 6.0 70 205-282 49-127 (135)
427 COG1748 LYS9 Saccharopine dehy 41.1 1.8E+02 0.0038 30.1 9.3 132 159-316 3-155 (389)
428 TIGR03249 KdgD 5-dehydro-4-deo 40.1 42 0.00091 33.1 4.6 57 221-279 14-70 (296)
429 PF08659 KR: KR domain; Inter 39.9 2.5E+02 0.0055 25.1 9.5 70 191-268 25-99 (181)
430 PRK12595 bifunctional 3-deoxy- 39.7 1.8E+02 0.0039 29.7 9.1 82 201-292 213-299 (360)
431 COG1066 Sms Predicted ATP-depe 39.5 3.3E+02 0.0071 28.3 10.6 131 192-335 121-274 (456)
432 PRK10638 glutaredoxin 3; Provi 38.7 1.7E+02 0.0038 22.2 7.1 68 192-272 3-72 (83)
433 PF03162 Y_phosphatase2: Tyros 38.3 62 0.0013 28.9 5.0 72 192-266 34-108 (164)
434 TIGR00506 ribB 3,4-dihydroxy-2 37.3 81 0.0018 29.2 5.6 49 235-284 142-190 (199)
435 TIGR03581 EF_0839 conserved hy 36.6 1.4E+02 0.0029 28.0 6.8 74 203-289 135-211 (236)
436 PRK04147 N-acetylneuraminate l 36.1 54 0.0012 32.3 4.7 57 221-279 12-69 (293)
437 TIGR02313 HpaI-NOT-DapA 2,4-di 35.9 57 0.0012 32.2 4.8 57 220-278 8-64 (294)
438 PLN02417 dihydrodipicolinate s 35.8 54 0.0012 32.1 4.6 57 221-279 10-66 (280)
439 cd00886 MogA_MoaB MogA_MoaB fa 35.6 1.9E+02 0.0041 25.2 7.6 62 202-273 22-83 (152)
440 PRK13396 3-deoxy-7-phosphohept 35.4 2.5E+02 0.0054 28.6 9.2 84 201-293 196-284 (352)
441 cd00408 DHDPS-like Dihydrodipi 35.2 54 0.0012 32.0 4.5 58 220-279 5-62 (281)
442 TIGR00959 ffh signal recogniti 34.8 5.6E+02 0.012 26.9 12.5 87 193-289 130-224 (428)
443 PF06415 iPGM_N: BPG-independe 34.4 55 0.0012 30.8 4.1 52 233-284 12-66 (223)
444 KOG0630 Predicted pyridoxal-de 34.1 2.8E+02 0.0061 29.3 9.2 59 451-512 637-696 (838)
445 PRK03620 5-dehydro-4-deoxygluc 34.1 56 0.0012 32.4 4.4 62 222-285 17-81 (303)
446 TIGR00381 cdhD CO dehydrogenas 33.6 2E+02 0.0044 29.4 8.2 60 210-285 185-245 (389)
447 PRK00910 ribB 3,4-dihydroxy-2- 32.8 1E+02 0.0022 28.9 5.6 47 237-284 155-201 (218)
448 PRK05872 short chain dehydroge 32.5 4.4E+02 0.0095 25.6 10.6 66 194-266 36-101 (296)
449 KOG3974 Predicted sugar kinase 32.5 51 0.0011 31.7 3.5 61 218-287 79-139 (306)
450 cd00758 MoCF_BD MoCF_BD: molyb 32.5 2.1E+02 0.0046 24.2 7.2 62 201-274 20-81 (133)
451 COG1105 FruK Fructose-1-phosph 32.2 60 0.0013 32.2 4.1 59 230-289 109-168 (310)
452 PRK11633 cell division protein 32.1 2E+02 0.0043 27.2 7.4 49 457-507 163-213 (226)
453 TIGR01275 ACC_deam_rel pyridox 31.8 2.6E+02 0.0056 27.6 8.9 54 160-224 58-113 (311)
454 PF05368 NmrA: NmrA-like famil 31.7 2.6E+02 0.0057 25.9 8.5 76 192-285 24-99 (233)
455 TIGR00683 nanA N-acetylneurami 31.4 71 0.0015 31.5 4.6 57 221-279 9-66 (290)
456 PRK00014 ribB 3,4-dihydroxy-2- 31.2 1.1E+02 0.0024 28.9 5.5 45 238-283 160-204 (230)
457 PF10022 DUF2264: Uncharacteri 31.1 3.5E+02 0.0075 27.6 9.5 125 22-149 2-148 (361)
458 PRK01792 ribB 3,4-dihydroxy-2- 31.0 1.1E+02 0.0025 28.5 5.5 48 236-284 153-200 (214)
459 cd00954 NAL N-Acetylneuraminic 30.8 76 0.0016 31.1 4.7 57 221-279 9-66 (288)
460 PF04273 DUF442: Putative phos 30.6 56 0.0012 27.0 3.1 50 204-260 48-97 (110)
461 cd07021 Clp_protease_NfeD_like 30.3 1E+02 0.0023 27.9 5.1 75 234-321 15-92 (178)
462 TIGR00177 molyb_syn molybdenum 30.2 3.1E+02 0.0067 23.6 8.0 63 200-274 27-89 (144)
463 PF00128 Alpha-amylase: Alpha 30.1 33 0.00071 33.4 2.0 32 259-290 44-75 (316)
464 KOG0622 Ornithine decarboxylas 30.0 2.7E+02 0.0058 28.8 8.2 81 191-285 123-216 (448)
465 PRK03353 ribB 3,4-dihydroxy-2- 30.0 1.2E+02 0.0026 28.5 5.6 46 237-283 154-199 (217)
466 PRK08057 cobalt-precorrin-6x r 29.8 41 0.00089 32.3 2.5 30 263-292 48-77 (248)
467 CHL00073 chlN photochlorophyll 29.5 93 0.002 32.8 5.2 51 233-285 81-133 (457)
468 PLN00125 Succinyl-CoA ligase [ 29.4 65 0.0014 31.9 3.9 76 198-290 54-131 (300)
469 COG2102 Predicted ATPases of P 29.4 4.9E+02 0.011 24.5 9.8 101 159-283 3-115 (223)
470 PLN02672 methionine S-methyltr 29.3 5.1E+02 0.011 30.7 11.5 142 119-288 416-565 (1082)
471 COG0296 GlgB 1,4-alpha-glucan 29.1 37 0.00081 37.1 2.3 99 213-331 176-275 (628)
472 TIGR02026 BchE magnesium-proto 28.9 3.4E+02 0.0073 29.0 9.6 63 218-291 39-103 (497)
473 PF02603 Hpr_kinase_N: HPr Ser 28.9 60 0.0013 27.5 3.1 47 231-285 64-110 (127)
474 COG1184 GCD2 Translation initi 28.5 4.1E+02 0.0089 26.3 9.1 100 158-286 120-227 (301)
475 COG0552 FtsY Signal recognitio 28.5 57 0.0012 32.6 3.3 61 233-294 205-274 (340)
476 PRK05876 short chain dehydroge 28.4 5.3E+02 0.012 24.7 10.5 44 218-266 56-99 (275)
477 TIGR00334 5S_RNA_mat_M5 ribonu 28.0 64 0.0014 29.1 3.2 53 230-293 10-62 (174)
478 PLN02331 phosphoribosylglycina 28.0 4.9E+02 0.011 24.2 9.4 72 161-243 5-76 (207)
479 PF03435 Saccharop_dh: Sacchar 28.0 3.1E+02 0.0067 28.0 8.9 71 194-286 25-96 (386)
480 PF01301 Glyco_hydro_35: Glyco 27.9 91 0.002 31.2 4.8 20 267-286 63-82 (319)
481 cd01991 Asn_Synthase_B_C The C 27.5 5.4E+02 0.012 24.4 11.8 104 159-289 18-125 (269)
482 PF00701 DHDPS: Dihydrodipicol 27.4 99 0.0022 30.3 4.9 62 222-285 11-75 (289)
483 TIGR01019 sucCoAalpha succinyl 27.3 71 0.0015 31.4 3.8 73 200-290 50-124 (286)
484 PF06620 DUF1150: Protein of u 27.1 2.2E+02 0.0048 21.8 5.6 64 211-282 8-71 (76)
485 PF12818 Tegument_dsDNA: dsDNA 27.0 6.1E+02 0.013 24.9 11.4 53 234-286 217-273 (282)
486 KOG2865 NADH:ubiquinone oxidor 26.5 5.1E+02 0.011 25.6 9.0 59 218-287 110-177 (391)
487 PF05913 DUF871: Bacterial pro 26.1 70 0.0015 32.6 3.5 56 233-288 12-68 (357)
488 PF03599 CdhD: CO dehydrogenas 26.0 2.1E+02 0.0045 29.4 6.8 43 233-285 107-149 (386)
489 PRK09441 cytoplasmic alpha-amy 25.6 44 0.00096 35.5 2.1 30 260-289 74-103 (479)
490 COG0656 ARA1 Aldo/keto reducta 25.6 6E+02 0.013 24.9 9.7 66 204-284 121-187 (280)
491 PF02571 CbiJ: Precorrin-6x re 25.5 52 0.0011 31.6 2.4 29 263-291 49-77 (249)
492 KOG1201 Hydroxysteroid 17-beta 25.2 6.7E+02 0.015 24.8 10.4 104 159-280 40-145 (300)
493 KOG0369 Pyruvate carboxylase [ 25.2 56 0.0012 35.6 2.7 32 263-294 167-198 (1176)
494 PRK08265 short chain dehydroge 25.0 5.9E+02 0.013 24.0 10.2 59 194-261 33-91 (261)
495 smart00852 MoCF_biosynth Proba 24.8 3.4E+02 0.0074 22.9 7.2 62 200-273 18-79 (135)
496 PRK00724 formate dehydrogenase 24.5 2E+02 0.0043 27.9 6.2 65 201-284 180-247 (263)
497 PRK05678 succinyl-CoA syntheta 24.4 92 0.002 30.7 4.0 72 200-289 52-125 (291)
498 TIGR01274 ACC_deam 1-aminocycl 24.4 4.2E+02 0.0091 26.6 8.9 56 160-225 68-131 (337)
499 PF13460 NAD_binding_10: NADH( 24.2 4.9E+02 0.011 22.8 8.6 52 218-282 40-91 (183)
500 COG1504 Uncharacterized conser 24.0 1.3E+02 0.0028 24.9 3.9 48 230-285 47-94 (121)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=2.6e-96 Score=768.51 Aligned_cols=481 Identities=58% Similarity=1.072 Sum_probs=449.8
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCC
Q 010125 18 TNPLDSEEFRRQGHMIIDFIADYYKNVEK----YPVRSQVEPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQS 93 (517)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~ 93 (517)
+.+|++++||+++++++|++.+|++++.+ +||.+...|++|++.++..+|++|++++++|+++.+.+.|+.++|+|
T Consensus 51 ~~~m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~~~~~~i~p~~~~~~h 130 (539)
T PLN02590 51 MKPMDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLDDVSKKIMPGITHWQS 130 (539)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHHHHHHHHhccCCcCCC
Confidence 55699999999999999999999999887 79999999999999999999999999999999999999999999999
Q ss_pred CccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHH
Q 010125 94 PNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCT 173 (517)
Q Consensus 94 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a 173 (517)
|+||||++++++++++++|++++++|++...|..+|+++++|+++++|+++++|+|+.+..++.++|+||+|||+||++|
T Consensus 131 P~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~a 210 (539)
T PLN02590 131 PSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVV 210 (539)
T ss_pred CCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999865433346899999999999999
Q ss_pred HHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceE
Q 010125 174 LTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLF 253 (517)
Q Consensus 174 l~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~ 253 (517)
|.+||++..++.|..+.++.+||+|+++|+|+.|||+++|+|.++++.||+|..++++||+++|+++|++++++|..|++
T Consensus 211 l~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~ 290 (539)
T PLN02590 211 VLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF 290 (539)
T ss_pred HHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEE
Confidence 99999988776676667889999999999999999999999999999999986557899999999999999999999999
Q ss_pred EEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeC
Q 010125 254 LCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKD 333 (517)
Q Consensus 254 vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~ 333 (517)
||+|+|||.+|+||||++|+++|++||+||||||||||++++++++++++.|+++|||+++|+|||+++|++||++++|+
T Consensus 291 VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~ 370 (539)
T PLN02590 291 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKD 370 (539)
T ss_pred EEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010125 334 PRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRF 413 (517)
Q Consensus 334 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~ 413 (517)
+..+.+++...++|+..........+++.+|++++|||++++++|++|+.+|.+|+++++++++++|++|.+.|++.|+|
T Consensus 371 ~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~f 450 (539)
T PLN02590 371 RYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSF 450 (539)
T ss_pred HHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 98888889999999965433334467899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCc
Q 010125 414 EIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTE 493 (517)
Q Consensus 414 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 493 (517)
+++.+|.+++||||+.|.. ...+..+.+|.+|.++|+++|.++++++.++|+.+||+|++|+.|+
T Consensus 451 el~~~~~l~iVcFr~~~~~---------------~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~ 515 (539)
T PLN02590 451 EVVTTRYFSLVCFRLAPVD---------------GDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTE 515 (539)
T ss_pred EEecCCceEEEEEEecCCC---------------CCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCC
Confidence 9999999999999998752 1234568899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 010125 494 KRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 494 ~~di~~l~~~l~~~~~~l~~ 513 (517)
++||+.+++.|.+.++++-+
T Consensus 516 ~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 516 EKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999887754
No 2
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=5.4e-91 Score=729.59 Aligned_cols=482 Identities=60% Similarity=1.089 Sum_probs=449.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccc
Q 010125 18 TNPLDSEEFRRQGHMIIDFIADYYKNVEKYPVRSQVEPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYF 97 (517)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~ 97 (517)
+..||.++||++++++++++.+|++++.++||.|...|+++++.++..+|++|.+++++++++.+.+.|+.++|+||+||
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f~ 86 (490)
T PLN02880 7 LRPMDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLDDVQAKILPGVTHWQSPNYF 86 (490)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCee
Confidence 34589999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHH
Q 010125 98 AYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAA 177 (517)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a 177 (517)
||++++++++++++|++++.+|+++..|..+|.++++|+++++|+++++|+|+.+..++.++|++|+|||+||++||++|
T Consensus 87 ~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~A 166 (490)
T PLN02880 87 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAA 166 (490)
T ss_pred EeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998754334568999999999999999999
Q ss_pred HHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEee
Q 010125 178 RDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCAT 257 (517)
Q Consensus 178 r~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t 257 (517)
|++.+++.|..+.++.+||+|+.+|+|+.|||+++|+|.++++.||+|.+++++||+++|+++|++++++|..|++||+|
T Consensus 167 R~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvat 246 (490)
T PLN02880 167 RDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCAT 246 (490)
T ss_pred HHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEe
Confidence 99887776766667899999999999999999999999999999999865578999999999999999999999999999
Q ss_pred ccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhH
Q 010125 258 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRAL 337 (517)
Q Consensus 258 ~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~ 337 (517)
+|||.+|++|||++|+++|++||+|+|||||||+++++++++++.+.|+++|||+++|+|||+++|++||++++|++..+
T Consensus 247 aGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l 326 (490)
T PLN02880 247 VGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNAL 326 (490)
T ss_pred cCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred HhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 338 VSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 338 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
.+.+...++|+...........++.+|++++|||++++++|++++.+|.+|+++++++++++++++.+.|++.|+|+++.
T Consensus 327 ~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~ 406 (490)
T PLN02880 327 IQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT 406 (490)
T ss_pred HHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 77888889999764333334578889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHH
Q 010125 418 PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 418 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 497 (517)
+|.+++||||+.|.. .+.+..+.+|.+++++|+++|.++++.+.+.|+.++|+|+++++|+++|+
T Consensus 407 ~~~~~iv~Fr~~~~~---------------~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di 471 (490)
T PLN02880 407 PRIFSLVCFRLVPPK---------------NNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHV 471 (490)
T ss_pred CCceEEEEEEEeCCC---------------CChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHH
Confidence 999999999998752 13455688999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 010125 498 VVAWTVVQQHLEAFQSA 514 (517)
Q Consensus 498 ~~l~~~l~~~~~~l~~~ 514 (517)
+.+++.|.++++++..+
T Consensus 472 ~~~~~~i~~~~~~~~~~ 488 (490)
T PLN02880 472 TAAWKVLQDEASKLLGK 488 (490)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999988754
No 3
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.3e-89 Score=664.95 Aligned_cols=464 Identities=48% Similarity=0.892 Sum_probs=443.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeC
Q 010125 21 LDSEEFRRQGHMIIDFIADYYKNVEKYPVRSQVEPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYF 100 (517)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~ 100 (517)
|+.++||+.+++++|+|+||+++++++||.|.++|++++.++|...|++|+++++|++|+.+.++||++||+||+||+|+
T Consensus 1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~fhAyf 80 (511)
T KOG0628|consen 1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILGDLEKIIMPGITHWQHPHFHAYF 80 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHHHHHHHccCCCcccCCCceeeEc
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCccccc--CCCCceEEcCCchHHHHHHHHHHH
Q 010125 101 PSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLF--SGNGGGVIQGTTCEAILCTLTAAR 178 (517)
Q Consensus 101 ~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~--~~~~~g~~t~ggt~a~~~al~~ar 178 (517)
|++.+++++++|+|+..++.-++.|.++|++++||..+.+||++++++|..|.. .+.|+|++.+++|++++.++++||
T Consensus 81 pa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR 160 (511)
T KOG0628|consen 81 PAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAAR 160 (511)
T ss_pred cCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999864 357899999999999999999999
Q ss_pred HHHHHHhccc--------CCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCc
Q 010125 179 DRVLNKIGRE--------NISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLI 250 (517)
Q Consensus 179 ~~~~~~~g~~--------~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~ 250 (517)
...+++.+.. -..+.|+|+|+++|.|++|+|.+.|+ +++.+|+|. ++.|+.+.|+++|++|.++|.+
T Consensus 161 ~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~--n~~mr~~~L~~AIe~D~arGlI 235 (511)
T KOG0628|consen 161 TEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDE--NFGMRGDTLRKAIEEDIARGLI 235 (511)
T ss_pred HHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeeccc--CcCCCHHHHHHHHHHHHhCCCc
Confidence 9888765432 23689999999999999999999999 999999985 8999999999999999999999
Q ss_pred ceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEE
Q 010125 251 PLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLW 330 (517)
Q Consensus 251 p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~ 330 (517)
||+|++|.|||.++++|+|++|..||+++|+||||||||+|.++.||+++.++.|++.|||+.+++|||+.+-++|+.+|
T Consensus 236 Pf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lW 315 (511)
T KOG0628|consen 236 PFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLW 315 (511)
T ss_pred cEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeeecce
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010125 331 VKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD 410 (517)
Q Consensus 331 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~ 410 (517)
+||...+.++++..+-||.+.... ...||.+|.+..+|||+++++|+.+|.+|.+++++.++++.++++.+.+.+.+.
T Consensus 316 vkd~~~~~~~~~vdp~yL~h~~~~--~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d 393 (511)
T KOG0628|consen 316 VKDGTKLSRAFNVDPLYLKHAYQG--SAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRAD 393 (511)
T ss_pred eecCceeeeeeecChHhhcchhhc--cCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999988888999999999887653 378999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCC
Q 010125 411 KRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGAT 490 (517)
Q Consensus 411 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 490 (517)
+.||+.++..+++||||..+. |+.|++|+++++.+|.+++.+..+.|+.+||++++++
T Consensus 394 ~~FE~~~~~~lgLvcFRlk~~----------------------N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~ 451 (511)
T KOG0628|consen 394 PRFEIVNKRILGLVCFRLKGD----------------------NEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSP 451 (511)
T ss_pred CcceeecccccceeEEeecCC----------------------cHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCC
Confidence 999999999999999999886 7899999999999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHh
Q 010125 491 LTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 491 ~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
.|+++||++.++.|.+.+.++..
T Consensus 452 ~t~~~di~~a~~~I~~~a~~l~~ 474 (511)
T KOG0628|consen 452 LTNESDIDEAWKIIFEAADELFE 474 (511)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999988653
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=8.1e-75 Score=608.00 Aligned_cols=467 Identities=22% Similarity=0.318 Sum_probs=392.9
Q ss_pred HHHHHHHHHHHHHHHHHHHh--cCCCCCCCCCChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCC
Q 010125 24 EEFRRQGHMIIDFIADYYKN--VEKYPVRSQVEPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFP 101 (517)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~ 101 (517)
..+.++.+++.+.+++|+.+ ....|+.+.+.++.. ...+|++|.+.+++++++.+.+.++.++|+||+||||++
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f~g~~~ 97 (522)
T TIGR03799 22 STLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDFS----SAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSFIGHMT 97 (522)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhccc----ccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCeEEecc
Confidence 56777777777777777766 344466666555443 346899999999999999999999999999999999999
Q ss_pred CC-CChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCC-Ccccc-----cCCCCceEEcCCchHHHHHHH
Q 010125 102 SS-GSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKL-PKSFL-----FSGNGGGVIQGTTCEAILCTL 174 (517)
Q Consensus 102 ~~-~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~-~~~~~-----~~~~~~g~~t~ggt~a~~~al 174 (517)
++ +.....+++ +.+.+|+|...|+.||++++||+++++|++++++. ++.++ ..+.++|+||+|||+||++||
T Consensus 98 ~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al 176 (522)
T TIGR03799 98 SALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITAL 176 (522)
T ss_pred CCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHH
Confidence 86 333344677 67789999999999999999999999999999963 32221 112357999999999999999
Q ss_pred HHHHHHHHHHhcc------c---------CCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH
Q 010125 175 TAARDRVLNKIGR------E---------NISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMA 239 (517)
Q Consensus 175 ~~ar~~~~~~~g~------~---------~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~ 239 (517)
++||++.++..+. + +.++++||+|+.+|+|+.|+++++|+|..+++.||+|. +|+||+++|++
T Consensus 177 ~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~ 254 (522)
T TIGR03799 177 WVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRD 254 (522)
T ss_pred HHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHH
Confidence 9999987643221 1 12578999999999999999999999998999999985 67999999999
Q ss_pred HHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccc
Q 010125 240 QINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKW 319 (517)
Q Consensus 240 ~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~ 319 (517)
+|+++.++|.+|++|++++|||.+|++|||++|+++|++||+|+|||||||++.++++++++++.+++++||+++|+|||
T Consensus 255 ~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~ 334 (522)
T TIGR03799 255 KCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQ 334 (522)
T ss_pred HHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhc
Confidence 99999888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHH
Q 010125 320 FFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNM 399 (517)
Q Consensus 320 l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~ 399 (517)
+++|++||++++|++..+ +.+...++|+.... ..++.++++++||++.++++|++++.+|.+|+++++++.+++
T Consensus 335 l~~P~g~G~llvr~~~~~-~~~~~~~~Yl~~~~-----~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~l 408 (522)
T TIGR03799 335 LYVPMGAGMVLFKDPALM-SAIEHHAEYILRKG-----SKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEK 408 (522)
T ss_pred CCcCcccEEEEEeCHHHH-HHhccCcchhcCCC-----CCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999998654 56777788985421 245678899999999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-
Q 010125 400 AKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG- 478 (517)
Q Consensus 400 a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~- 478 (517)
+++|.+.|++.|+|+++.+|.+++||||+.|...+.... .++++......+..|.+|+++.++++++|.+|++.+.+.
T Consensus 409 a~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~-~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~ 487 (522)
T TIGR03799 409 AKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALA-KADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTP 487 (522)
T ss_pred HHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhccccc-ccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecc
Confidence 999999999999999999999999999998864332111 011111111234568899999999999999999998875
Q ss_pred ------CEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 479 ------GIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 479 ------g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
+..+||+|++||.|+++||+.+++.=
T Consensus 488 ~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~~ 519 (522)
T TIGR03799 488 AQYDHQPTVVFRVVLANPLTTHEILQDILDEQ 519 (522)
T ss_pred cccCCCCcEEEEEEecCCCCCHHHHHHHHHHh
Confidence 45789999999999999999988653
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=7.8e-75 Score=588.72 Aligned_cols=370 Identities=39% Similarity=0.723 Sum_probs=332.2
Q ss_pred hhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHH
Q 010125 55 PGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATEL 134 (517)
Q Consensus 55 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~l 134 (517)
|++|++.++..+|++|.++++|++++.+.+.++..+|+||+||+|+++++++++++++++++.+|+|...|..+|.++++
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~~~~ 80 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAATEI 80 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHHHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhcccccccccccccccc
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccC---CCCeEEEeCCCCchHHHHHHHH
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN---ISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~---~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
|+++++|+++++|+|..+...+.++|++|+|||+||++|+++||++..++.+..+ .++++||+|+.+|||+.|+|++
T Consensus 81 E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~ 160 (373)
T PF00282_consen 81 EREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARI 160 (373)
T ss_dssp HHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHH
T ss_pred hHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcce
Confidence 9999999999999997654333468999999999999999999999877654444 4689999999999999999999
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccc
Q 010125 212 VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 291 (517)
Q Consensus 212 ~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~ 291 (517)
+|+ .++.||+|+ +++||+++|+++|+++.++|..|++|++|+|||.+|++||+++|+++|++||+|+||||||||
T Consensus 161 lGl---g~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg 235 (373)
T PF00282_consen 161 LGL---GVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGG 235 (373)
T ss_dssp TTS---EEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGG
T ss_pred eee---EEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccc
Confidence 999 599999986 679999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC
Q 010125 292 SACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR 371 (517)
Q Consensus 292 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 371 (517)
+++++++++++..++++||||++|+|||+++|++||++++|++..+...+...++|+.+...+.....++.++++++||+
T Consensus 236 ~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~ 315 (373)
T PF00282_consen 236 SALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGSRR 315 (373)
T ss_dssp GGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGH
T ss_pred cccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhccccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999888888888999986554445567788999999999
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEec
Q 010125 372 FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVS 429 (517)
Q Consensus 372 ~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~ 429 (517)
++++++|++|+.+|.+|+++++++.++++++|++.|++.++|+++.+|.+++||||++
T Consensus 316 ~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 316 FRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred chHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999984
No 6
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=2.1e-73 Score=548.25 Aligned_cols=471 Identities=21% Similarity=0.334 Sum_probs=426.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCC--CCCCCCCChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCC
Q 010125 24 EEFRRQGHMIIDFIADYYKNVEK--YPVRSQVEPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFP 101 (517)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~ 101 (517)
+..+.++.++++.+.+|...--+ ..|.+.+.|++|+..++.++|++++++++|+.+.++.+ ...+...|||||+.+.
T Consensus 31 ~~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~~cr~tl-~y~vKTgHprffNQl~ 109 (510)
T KOG0629|consen 31 EVTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILEDCRDTL-KYSVKTGHPRFFNQLS 109 (510)
T ss_pred hhhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHHHHHHHH-HhhhccCCCcchhhhc
Confidence 33478889999999999665433 46889999999999999999999999999999999875 5556778999999999
Q ss_pred CCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHH
Q 010125 102 SSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRV 181 (517)
Q Consensus 102 ~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~ 181 (517)
++..+.++.++++++..|+|.+.|+.+|+...+|.+|...+.++.|++.+ ++|+|++||+.+|+.|+.+||.+.
T Consensus 110 ~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~------~DgIf~pggsisn~Ya~~~Aryk~ 183 (510)
T KOG0629|consen 110 SGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG------GDGIFAPGGSISNMYAMNCARYKN 183 (510)
T ss_pred cCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC------CCceecCCchhHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999975 489999999999999999999876
Q ss_pred HHH---hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeec
Q 010125 182 LNK---IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATI 258 (517)
Q Consensus 182 ~~~---~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~ 258 (517)
+++ .|..+.|..++|+|+++|||+.|+|..+|+|.++++.|++++ .|+|++++||+.|.+.+++|..|++|.+|+
T Consensus 184 ~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e--~Gkm~~~dLe~kile~k~kg~~Pf~vnaTa 261 (510)
T KOG0629|consen 184 FPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDE--RGKMIPDDLEKKILEAKAKGGVPFFVNATA 261 (510)
T ss_pred CchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccc--cCccchHHHHHHHHHHHhcCCCCeEEEecC
Confidence 654 466678999999999999999999999999999999999986 679999999999999999999999999999
Q ss_pred cCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHH
Q 010125 259 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALV 338 (517)
Q Consensus 259 gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~ 338 (517)
|||..|++|||+.|+++|++|++|+||||||||+.+.+..+++++.|++++||+++++||++++|..||.+++|....+.
T Consensus 262 GTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~ 341 (510)
T KOG0629|consen 262 GTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQ 341 (510)
T ss_pred CceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 339 SSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 339 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
+..+..+.|+++........+|.+++.++|+|+...+++|..|++-|.+|+++.++++.++|+||.++|++.++++++..
T Consensus 342 ~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~ 421 (510)
T KOG0629|consen 342 RCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFE 421 (510)
T ss_pred hhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhc
Confidence 88899999999877656667788999999999999999999999999999999999999999999999999999887754
Q ss_pred --CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECC-EeEEEEEecCCCCcHH
Q 010125 419 --CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGG-IYAIRFATGATLTEKR 495 (517)
Q Consensus 419 --~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lR~~~~~~~t~~~ 495 (517)
|+..+|||++.|+.+|..... ......+..+.-.+.+++.++|..+++...... ..++|..+.++..+.+
T Consensus 422 ~~pe~~nv~fw~vp~~lR~~~~~-------~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~a 494 (510)
T KOG0629|consen 422 LEPEHVNVCFWYVPPSLRGWQEN-------PERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEA 494 (510)
T ss_pred CCCceEEEeeccCchHhccCccc-------chhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhh
Confidence 788899999999877654332 112345566777889999999999888876643 5699999999999999
Q ss_pred HHHHHHHHHHHHHHH
Q 010125 496 HVVVAWTVVQQHLEA 510 (517)
Q Consensus 496 di~~l~~~l~~~~~~ 510 (517)
|+|.+++.|..+++.
T Consensus 495 d~dflldEIerlgq~ 509 (510)
T KOG0629|consen 495 DLDFLLDEIERLGQD 509 (510)
T ss_pred hHHHHHHHHHHhccC
Confidence 999999999888754
No 7
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=3.2e-69 Score=569.06 Aligned_cols=464 Identities=17% Similarity=0.239 Sum_probs=387.7
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCC-ccc
Q 010125 19 NPLDSEEFRRQGHMIIDFIADYYKNVEKYPVRSQVEPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSP-NYF 97 (517)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p-~~~ 97 (517)
...+.+.|++++.++++.+.+++++..... -+..+|++++. ..+.+...+++++|+++.+.+.+++++|+|| ||+
T Consensus 12 k~en~~~~~~~~~~~~~~~~~~r~~~~p~d-~~~~~~~~~~~---~~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry~ 87 (608)
T TIGR03811 12 KAENGQLYKDLLNKLVDEHLGWRQNYMPQD-KPVISPQERTS---KSFTKTVNNMKDVLDELSSRLRTESVPWHSAGRYW 87 (608)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHhcCCCC-CCCCCHHHhcc---cccccCccCHHHHHHHHHHHHhcCCCCCCCccceE
Confidence 346788999999999999999999844321 13566776654 3455666789999999999999999999999 999
Q ss_pred eeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHH
Q 010125 98 AYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAA 177 (517)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a 177 (517)
||+++++++|++++++++..+|+|...|+.||+++.+|+++.+|+++++|+++. +|+||+|||+||+.||++|
T Consensus 88 ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-------~G~~TsGGT~ANl~aL~~A 160 (608)
T TIGR03811 88 GHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-------WGHIVADGSLANLEGLWYA 160 (608)
T ss_pred EECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-------CeEEeCChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999864 6899999999999999999
Q ss_pred HHHHH-----HHh---------ccc--------------------------------CCCCe-EEEeCCCCchHHHHHHH
Q 010125 178 RDRVL-----NKI---------GRE--------------------------------NISKL-IVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 178 r~~~~-----~~~---------g~~--------------------------------~~~~~-~v~~s~~~H~s~~kaa~ 210 (517)
|+.+. +.. +++ ...+. ++++|+.+|||+.|+|.
T Consensus 161 R~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ 240 (608)
T TIGR03811 161 RNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAAD 240 (608)
T ss_pred HHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHH
Confidence 98641 110 000 01122 79999999999999999
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHH---HHhCC--eEEc
Q 010125 211 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVA---KQFGI--WVHV 285 (517)
Q Consensus 211 ~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~---~~~gi--~lhv 285 (517)
++|+|.++++.||+|. +++||+++|+++|+++.++|.+|++||+|+|||.+|+||||++|+++| ++||+ |+||
T Consensus 241 ilGlG~~~vv~VpvD~--~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHV 318 (608)
T TIGR03811 241 IIGIGLDQVIPVPVDS--NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHV 318 (608)
T ss_pred HcCCCcccEEEeecCC--CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEee
Confidence 9999999999999985 689999999999999999999999999999999999999999999999 67898 6999
Q ss_pred cccccccc--ccC------------------------------ccccccccCCCCCCeeeeccccccCCCCcceEEEEeC
Q 010125 286 DAAYAGSA--CIC------------------------------PEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKD 333 (517)
Q Consensus 286 DaA~g~~~--~~~------------------------------~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~ 333 (517)
||||||++ +++ +++++.+.++++||||++|+|||+++|++||++++|+
T Consensus 319 DAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd 398 (608)
T TIGR03811 319 DAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQD 398 (608)
T ss_pred eccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeC
Confidence 99999975 222 3456678899999999999999999999999999999
Q ss_pred chhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhc-
Q 010125 334 PRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSG- 409 (517)
Q Consensus 334 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~- 409 (517)
+. +.+.+...++|+...... .....+.++++++|+ ++++++|++++.+ |.+||++++++++++|+++.+.|++
T Consensus 399 ~~-~~~~~~~~a~Yl~~~~~~--~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 399 IR-MRDVISYFATYVFEKGAD--IPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HH-HHHHHhcCcchhcccccc--CcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 96 566788899999753221 112456778899986 6789999999998 9999999999999999999999988
Q ss_pred -----CCCeEE--ecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcC-----cEEEeeee
Q 010125 410 -----DKRFEI--VFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASG-----KAYMTHAV 476 (517)
Q Consensus 410 -----~~~~~l--~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g-----~~~~~~~~ 476 (517)
.+.|++ +.+|++++|||++.+.+ +.+.+..|.+|+++.+++. ..| .+.++.|.
T Consensus 476 ~~~~~~~~~el~~~~~pdlniV~Fr~~~~g--------------~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~ 541 (608)
T TIGR03811 476 EFKVGDKEIEVHPLTKPDFNMVDYVFNEKG--------------NDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTD 541 (608)
T ss_pred ccccCCCCeeEEecCCCCcceEEEEEecCC--------------CccHHHHHHHHHHHHHhhccccCCCCCcceEeeecc
Confidence 466777 77899999999998763 1234668999999999886 222 24555553
Q ss_pred E--------------------------CCEeEEEEEecCCCCcH-HHHHHHHHHHHHHHHHHH
Q 010125 477 L--------------------------GGIYAIRFATGATLTEK-RHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 477 ~--------------------------~g~~~lR~~~~~~~t~~-~di~~l~~~l~~~~~~l~ 512 (517)
+ .+..+||.++|+|..++ +.++.+++.|++...+..
T Consensus 542 ~~~~~yg~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~ 604 (608)
T TIGR03811 542 FAIPDYGDSPFAFVNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKL 604 (608)
T ss_pred cccchhhhhHHHHHHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHH
Confidence 3 13468999999998666 668888888888776544
No 8
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-59 Score=483.70 Aligned_cols=442 Identities=24% Similarity=0.312 Sum_probs=364.4
Q ss_pred HHHHHHhcCCCCCCCCCChhhHhhhCCCCCCCCCCCHHHHHHHHHHh-hcCCCCCCCCCccceeCCCCCChHHHHHHHHH
Q 010125 37 IADYYKNVEKYPVRSQVEPGYLQKVLPESAPNNPESMETILQDVQQH-IVPGITHWQSPNYFAYFPSSGSIAGFLGEMLS 115 (517)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~ 115 (517)
+.++.......+..+...|-+-.......+|+.+.+.++++.++... +.+...++.||+++.|..+.+.++..+.+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~ 83 (460)
T COG0076 4 LIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLV 83 (460)
T ss_pred HHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHH
Confidence 44444444555555566666655566678999999999999999987 55666666799999999999999999999999
Q ss_pred hcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhccc---CCCC
Q 010125 116 SGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE---NISK 192 (517)
Q Consensus 116 ~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~---~~~~ 192 (517)
..+|+|...|..+|+++++|+++++|+++++|++... .|+||+|||+||++|++++|++..+..+.+ ....
T Consensus 84 ~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~~------~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~ 157 (460)
T COG0076 84 SALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEEA------SGTFTSGGTEANLLALLAARERWRKRALAESGKPGGK 157 (460)
T ss_pred HHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCCC------ceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCC
Confidence 9999999999999999999999999999999998653 799999999999999999999887543321 1134
Q ss_pred eEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHH
Q 010125 193 LIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPL 272 (517)
Q Consensus 193 ~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI 272 (517)
++|++|+.+|+|+.|+|+++|+ .++.+|+++. +++||+++|+++|++++..| +||+++|||++|.+|||++|
T Consensus 158 P~ii~s~~aH~s~~Kaa~~lG~---~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDdi~~i 229 (460)
T COG0076 158 PNIVCSETAHFSFEKAARYLGL---GLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDDIEEL 229 (460)
T ss_pred CeEEecCcchhHHHHHHHHhCC---CceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCCHHHH
Confidence 5899999999999999999999 7777777754 68999999999999999766 79999999999999999999
Q ss_pred HHHHHHhCCeEEcccccccccccCcccccc-ccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCc
Q 010125 273 CDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNK 351 (517)
Q Consensus 273 ~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~ 351 (517)
++||++|++|+||||||||+.+++.+.... ..++++||||++|+|||+++|++||++++||++.+.+.......|+...
T Consensus 230 a~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~ 309 (460)
T COG0076 230 ADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGG 309 (460)
T ss_pred HHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCC
Confidence 999999999999999999999988877776 5789999999999999999999999999999987777777777777542
Q ss_pred cccccccccCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecC
Q 010125 352 ATESMQVVDYKDWQITLSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSP 430 (517)
Q Consensus 352 ~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~ 430 (517)
....+++.++|.. .++++|+.++.+|.+||+++++++.++++++++.|++.+.|+++.+|.+++|||++++
T Consensus 310 --------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~fr~~~ 381 (460)
T COG0076 310 --------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAFRLKD 381 (460)
T ss_pred --------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEEEcCC
Confidence 2345677788876 7789999999999999999999999999999999999988999999999999999954
Q ss_pred CCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 431 SPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
..- ......+..+..+..+.......|..++..+.+.++.++++.+.++.++.++ +.+...+....++
T Consensus 382 ~~~-----------~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 449 (460)
T COG0076 382 DED-----------TLADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLLALIEEPGRE 449 (460)
T ss_pred ccc-----------chhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHHHHhhhhhhh
Confidence 310 0001122223344445555555676677777788888899988888777766 6666666655544
Q ss_pred HH
Q 010125 511 FQ 512 (517)
Q Consensus 511 l~ 512 (517)
+.
T Consensus 450 ~~ 451 (460)
T COG0076 450 IE 451 (460)
T ss_pred hh
Confidence 43
No 9
>PLN02263 serine decarboxylase
Probab=100.00 E-value=5.8e-58 Score=467.60 Aligned_cols=361 Identities=19% Similarity=0.251 Sum_probs=307.8
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCCh-HHHHHHHHHhcccccccccccCh---hhHHHHHHHHHHHHHHcC
Q 010125 72 SMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSI-AGFLGEMLSSGFNIVGFNWISSP---AATELENIVMDWLGQMLK 147 (517)
Q Consensus 72 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~sp---~~~~lE~~v~~~l~~l~g 147 (517)
.++++|+++.+.+.++..+ |||| |.+.++ ++.+++++...+|+-+..|..+| .+.++|+++++|+++++|
T Consensus 74 ~~~~~l~~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g 147 (470)
T PLN02263 74 YMASVLARYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE 147 (470)
T ss_pred hHHHHHHHHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhC
Confidence 3689999999999887543 9999 666667 89999999999999999999998 799999999999999999
Q ss_pred CCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCC
Q 010125 148 LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKS 227 (517)
Q Consensus 148 ~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~ 227 (517)
++++. .+|++|+||||||++||++||+.. ++.++|+|+++|+|+.||++++|+ +++.||+++
T Consensus 148 ~p~~~-----~~G~vtsGGTEaNL~Al~aARe~~---------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d~- 209 (470)
T PLN02263 148 IEKNE-----YWGYITNCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---ECVKVDTLV- 209 (470)
T ss_pred CCCCC-----CeEEEeCcHHHHHHHHHHHHHhhc---------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccCC-
Confidence 98631 279999999999999999999963 556899999999999999999999 999999975
Q ss_pred CCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC-----eEEcccccccccccCcccccc
Q 010125 228 SSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI-----WVHVDAAYAGSACICPEFRHF 302 (517)
Q Consensus 228 ~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi-----~lhvDaA~g~~~~~~~~~~~~ 302 (517)
+|+||+++|+++|.+++ .+|++|++|+|||++|++|||++|+++|++||+ |+||||||||+++++.+....
T Consensus 210 -~g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~ 285 (470)
T PLN02263 210 -SGEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPK 285 (470)
T ss_pred -CCcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccc
Confidence 67999999999998764 479999999999999999999999999999997 999999999998865444445
Q ss_pred ccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCC-CchHHHHHH
Q 010125 303 IDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRF-RSLKLWFVI 381 (517)
Q Consensus 303 ~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l 381 (517)
+++.+.+|||++|+|||+++|++||++++|++. .+.+...++|+... +.+++++|++ .++++|++|
T Consensus 286 ~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~~~~Yl~~~-----------d~ti~gSR~g~~al~lW~~L 352 (470)
T PLN02263 286 VTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR-----------DATIMGSRNGHAPIFLWYTL 352 (470)
T ss_pred cCCCcCccEEEECCccccCCCcCEEEEEEehhh--HhhhccChHhhCCC-----------CCCcCCCCCcHHHHHHHHHH
Confidence 667777999999999999999999999999753 35678888998753 2478899997 579999999
Q ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHH
Q 010125 382 RNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELL 461 (517)
Q Consensus 382 ~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 461 (517)
+.+|.+|++++++++.++|+++.+.|++. +++++.+|.+++|+|+.+.. . .
T Consensus 353 ~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~~-----------------------~---~-- 403 (470)
T PLN02263 353 NRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPKD-----------------------E---E-- 403 (470)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCch-----------------------H---H--
Confidence 99999999999999999999999999998 77777788899999984321 1 0
Q ss_pred HHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 462 ESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 462 ~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
..+|+. ++.. ...+|++++ ++.+.+.+|++++.|++.....
T Consensus 404 ---~~~gW~-L~~~----~~~~Hivvm-phv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 404 ---FVRRWQ-LACQ----GNIAHVVVM-PSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred ---hhcceE-EccC----CCcEEEEEc-CCCCHHHHHHHHHHHHHHHhhh
Confidence 124552 2221 136999997 6667789999999998886643
No 10
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=1.1e-56 Score=462.34 Aligned_cols=399 Identities=15% Similarity=0.207 Sum_probs=330.7
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHH
Q 010125 64 ESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLG 143 (517)
Q Consensus 64 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~ 143 (517)
..+|++|.+.+++++++...+.. .+..||+|++|+.+++.+. +.+++...+|++...+..+|..+++|+++++|++
T Consensus 15 ~~~p~~~~~~~~~~~~~~~~iyl--d~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~~~la 90 (431)
T TIGR01788 15 YRMPEEEMPPDAAYQLIHDELSL--DGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCVNMLA 90 (431)
T ss_pred ccCCCCCCCHHHHHHHHHHHhhh--cCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHH
Confidence 47899999999999999987643 4456899999997655444 6888888898887788888988899999999999
Q ss_pred HHcCCC-c-ccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccC--CCCeEEEeCCCCchHHHHHHHHcCCCCCCE
Q 010125 144 QMLKLP-K-SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN--ISKLIVYGSDQTHCALQKAAQIVGIDVKNF 219 (517)
Q Consensus 144 ~l~g~~-~-~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~--~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v 219 (517)
+++|++ + .. ..|++|+||||||++|+.++|++...+...++ ..+.+||+|+.+|+|+.|+++.+|+ ++
T Consensus 91 ~llg~~~~~~~-----~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~---~v 162 (431)
T TIGR01788 91 DLWHAPAKDAE-----AVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV---EL 162 (431)
T ss_pred HHhCCCCCCCC-----CeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc---ee
Confidence 999998 2 21 26788999999999999999865322211111 1356899999999999999999999 99
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh------CCeEEccccccccc
Q 010125 220 RAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF------GIWVHVDAAYAGSA 293 (517)
Q Consensus 220 ~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~------gi~lhvDaA~g~~~ 293 (517)
+.||+|+ ++++||+++|+++|++++ ++|+++++||.+|++||+++|+++|++| |+|+||||||||++
T Consensus 163 ~~i~~d~-~~~~vd~~~L~~~i~~~t------~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~ 235 (431)
T TIGR01788 163 REVPMDP-GRYVIDPEQVVEAVDENT------IGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFI 235 (431)
T ss_pred EEEecCC-CceeeCHHHHHHHHhhCC------eEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHH
Confidence 9999986 346999999999998764 5899999999999999999999999999 99999999999987
Q ss_pred cc--CccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC
Q 010125 294 CI--CPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR 371 (517)
Q Consensus 294 ~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 371 (517)
++ .++.+..+. ++++||+++|+|||+++|+|||++++|++..+...+...++|+.... .+++++++|+
T Consensus 236 ~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~---------~~~t~~~sR~ 305 (431)
T TIGR01788 236 APFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDE---------PTFTLNFSRP 305 (431)
T ss_pred HHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCC---------CCcceecCch
Confidence 64 334443343 67999999999999999999999999998666566777778886421 2357889998
Q ss_pred C-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEecCCCcchhhhhhhhhccccch
Q 010125 372 F-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP-CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSE 449 (517)
Q Consensus 372 ~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 449 (517)
+ +++++|+.++.+|.+|++++++++++++++|.++|++.|+|+++.+ |.+++|||++.+..
T Consensus 306 g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~----------------- 368 (431)
T TIGR01788 306 ANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDA----------------- 368 (431)
T ss_pred HHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCC-----------------
Confidence 6 7789999999999999999999999999999999999999999987 78999999998641
Q ss_pred HHHHHHHHHHHHHHHHhcCcEE---EeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 450 EEQINEFNRELLESINASGKAY---MTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 450 ~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
+.+..+.++.++|.++|+++ .+++.+.|..++|++++ ++++.+.++++++.|.++...+
T Consensus 369 --~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~~-~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 369 --DPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIVVR-EGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred --CCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEEec-CCCCHHHHHHHHHHHHHHHHhh
Confidence 00123677888999999864 55666889999999985 6777889999999999987654
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=4.2e-50 Score=405.10 Aligned_cols=356 Identities=21% Similarity=0.252 Sum_probs=286.5
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhccccccccccc---ChhhHHHHHHHHHHHHHHcCCC
Q 010125 73 METILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWIS---SPAATELENIVMDWLGQMLKLP 149 (517)
Q Consensus 73 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~---sp~~~~lE~~v~~~l~~l~g~~ 149 (517)
..++|+.+.+.+.. ++..|+||......-++.+..++....|+.+..+.. +..+.++|+++++|+++++|++
T Consensus 8 ~~~~~~~~~~~~~~-----~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~ 82 (374)
T PLN03032 8 MADILASYDKLLAE-----KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELE 82 (374)
T ss_pred HHHHHHHHHHHHHH-----hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCC
Confidence 45677777776543 356789998776666667777776655443433333 3468999999999999999998
Q ss_pred cccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCC
Q 010125 150 KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSS 229 (517)
Q Consensus 150 ~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~ 229 (517)
++. .+|+||+||||||++|++++|+.. ++.+|++|+.+|+|+.|+++++|+ .++.||+++ +
T Consensus 83 ~~~-----~~G~fTsGGTEaNl~al~~ar~~~---------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~--~ 143 (374)
T PLN03032 83 KDE-----YWGYITTCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLP--S 143 (374)
T ss_pred Ccc-----CCEEEeCchHHHHHHHHHHHHHhC---------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCC--C
Confidence 642 268999999999999999998752 345899999999999999999999 789999986 5
Q ss_pred cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhC-----CeEEcccccccccccCcccccccc
Q 010125 230 YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFG-----IWVHVDAAYAGSACICPEFRHFID 304 (517)
Q Consensus 230 ~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~g-----i~lhvDaA~g~~~~~~~~~~~~~~ 304 (517)
|+||+++|+++|++++ ..|++|++++|||.+|++||+++|+++|++|| +|+|||||||++.+++......++
T Consensus 144 g~id~~~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~ 220 (374)
T PLN03032 144 GEIDYDDLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVT 220 (374)
T ss_pred CcCcHHHHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccC
Confidence 7999999999998653 25889999999999999999999999999996 599999999998876543333344
Q ss_pred CCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHH
Q 010125 305 GVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRN 383 (517)
Q Consensus 305 g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~ 383 (517)
....+||+++|+|||+++|+|||++++|++. .+.+...++|+... ++++++||+ +.++++|++|+.
T Consensus 221 ~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~--~~~~~~~~~Yl~~~-----------d~ti~gSR~g~~~l~~w~~l~~ 287 (374)
T PLN03032 221 FRKPIGSVSVSGHKFLGCPMPCGVALTRKKH--VKALSQNVEYLNSR-----------DATIMGSRNGHAPLYLWYTLRR 287 (374)
T ss_pred CCcCCcEEEECcccccCCCcCeEEEEEEchh--hHhhccCCcccCCC-----------CCcccCCCchHHHHHHHHHHHH
Confidence 4457999999999999999999999999753 24567778898642 368899997 678999999999
Q ss_pred hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHH
Q 010125 384 YGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLES 463 (517)
Q Consensus 384 ~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 463 (517)
+|.+|++++++++.++++++.+.|++. +++++..|.+++|+|+-+.. + .+.
T Consensus 288 ~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~----------------------~----~~~-- 338 (374)
T PLN03032 288 KGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD----------------------E----AFI-- 338 (374)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc----------------------H----hHh--
Confidence 999999999999999999999999986 88887788899999986532 1 111
Q ss_pred HHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 464 INASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 464 l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
+|+. ++.. +.++|+++| ++.+++.+|++++.|++
T Consensus 339 ---~~w~-l~~~----~~~~hi~vm-~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 339 ---KKWQ-LACE----GDIAHVVVM-PNVTVEKLDEFVEELVE 372 (374)
T ss_pred ---heee-eccc----CCEEEEEEC-CCCCHHHHHHHHHHHhc
Confidence 2432 2321 137999997 67778899999998875
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=1.6e-48 Score=396.74 Aligned_cols=355 Identities=21% Similarity=0.286 Sum_probs=287.6
Q ss_pred HHHHHHHHHhhcCCCCCCCCCccceeCCCCCCh-HHHHHHHHHhcccccccccccCh----hhHHHHHHHHHHHHHHcCC
Q 010125 74 ETILQDVQQHIVPGITHWQSPNYFAYFPSSGSI-AGFLGEMLSSGFNIVGFNWISSP----AATELENIVMDWLGQMLKL 148 (517)
Q Consensus 74 ~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~sp----~~~~lE~~v~~~l~~l~g~ 148 (517)
.+.|+++...+. +||+||.+++..... ++.+.+++....|+.+.. ...+ .+.++|+++++|+++++|+
T Consensus 8 ~~~~~~~~~~~~------~~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp-~~~~~~g~~~~~~e~~~~~~~a~l~g~ 80 (380)
T PRK02769 8 QKEIEDFWLYLR------HNQYFNVGYPEAADFDYSALKRFFSFSINNCGDP-YSKSNYPLNSFDFERDVMNFFAELFKI 80 (380)
T ss_pred HHHHHHHHHHHH------HhhhcccCCCchhhcCHHHHHHHHHhhhccCCCc-cccCCCCCChHHHHHHHHHHHHHHhCC
Confidence 566777776553 478777777766655 688888888877764433 3333 4789999999999999999
Q ss_pred CcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCC
Q 010125 149 PKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSS 228 (517)
Q Consensus 149 ~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~ 228 (517)
++.. ..|+||+||||||+.|++++|++. ++.+|++|+.+|+|+.|+++.+|+ ..+.||+++
T Consensus 81 ~~~~-----~~G~~TsGgTean~~a~~~ar~~~---------~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~-- 141 (380)
T PRK02769 81 PFNE-----SWGYITNGGTEGNLYGCYLARELF---------PDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLP-- 141 (380)
T ss_pred CCCC-----CCEEEecChHHHHHHHHHHHHHhC---------CCcEEEeCCCceehHHHHHHHcCC---CCceeccCC--
Confidence 7542 268999999999999999998752 456899999999999999999999 788899875
Q ss_pred CcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhC---CeEEcccccccccccCccccccccC
Q 010125 229 SYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFG---IWVHVDAAYAGSACICPEFRHFIDG 305 (517)
Q Consensus 229 ~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~g---i~lhvDaA~g~~~~~~~~~~~~~~g 305 (517)
+|+||+++|+++|+++ +.+|++|++++|||.+|++||+++|+++|++|| +|+|||||||++.+++.+....++.
T Consensus 142 ~g~id~~~L~~~i~~~---~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~ 218 (380)
T PRK02769 142 NGEIDYDDLISKIKEN---KNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSF 218 (380)
T ss_pred CCcCcHHHHHHHHHhC---CCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCc
Confidence 6799999999999875 567889999999999999999999999999998 6999999999988876554444555
Q ss_pred CCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHh
Q 010125 306 VEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNY 384 (517)
Q Consensus 306 ~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~ 384 (517)
.+++||+++|+|||+++|+|||++++|++.. ..+....+|+.. .++++++||+ +.++++|++++.+
T Consensus 219 ~~~vDsis~s~HK~~~~P~g~G~l~~r~~~~--~~~~~~~~yl~~-----------~d~t~~GSR~g~~~l~lw~aL~~l 285 (380)
T PRK02769 219 ADGIDSIAISGHKFIGSPMPCGIVLAKKKYV--ERISVDVDYIGS-----------RDQTISGSRNGHTALLLWAAIRSL 285 (380)
T ss_pred cCCCCEEEECCcccCCCCCCcEEEEEehhhh--hhcccCccccCC-----------CCCCccCCCCcHHHHHHHHHHHHH
Confidence 5589999999999999999999999997542 234455667643 2357889997 5789999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH
Q 010125 385 GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI 464 (517)
Q Consensus 385 g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 464 (517)
|.+|++++++++.++++++.++|++. +++++.+|.+++|+|+.+.. .+.
T Consensus 286 g~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~~v~f~~~~~---------------------------~~~--- 334 (380)
T PRK02769 286 GSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSITVVFPCPSE---------------------------RIW--- 334 (380)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCceEEEEcCCCH---------------------------HHH---
Confidence 99999999999999999999999885 89999899999999975421 111
Q ss_pred HhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 465 NASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 465 ~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
+|+ .++.. +.++|+++| ++.+++.||++++.|.+...
T Consensus 335 --~~w-~l~~~----~~~~hi~~~-~~~~~~~~~~f~~dl~~~~~ 371 (380)
T PRK02769 335 --KKW-HLATS----GNQAHIITM-PHHNKQQIDSLIDELIFDLK 371 (380)
T ss_pred --hCe-eEccc----CCEEEEEEC-CCCCHHHHHHHHHHHHHHHh
Confidence 243 22322 137999997 67778899999998887755
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=1.1e-44 Score=368.37 Aligned_cols=340 Identities=34% Similarity=0.596 Sum_probs=289.8
Q ss_pred cceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCC-cccccCCCCceEEcCCchHHHHHHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTL 174 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al 174 (517)
||+++++++++++.++|+++..+|++...|..+|...++|+++++|+++++|++ +. ..++||+|||+||+.++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~------~~~~~t~ggt~a~~~al 74 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSED------ADGVFTSGGSESNLLAL 74 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCC------CCEEEeCChhHHHHHHH
Confidence 688888999999999999999999998889999999999999999999999997 32 27899999999999999
Q ss_pred HHHHHHHHHHhcc---cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcc
Q 010125 175 TAARDRVLNKIGR---ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIP 251 (517)
Q Consensus 175 ~~ar~~~~~~~g~---~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p 251 (517)
.+++.+..++... ...++.+|++++.+|+++.++++.+|. +++.||+++ ++.+|+++|+++|++..++|.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~ 149 (345)
T cd06450 75 LAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDE--DGRMDPEALEAAIDEDKAEGLNP 149 (345)
T ss_pred HHHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCC--CCCcCHHHHHHHHHHHHHCCCCc
Confidence 9998754322111 111356899999999999999999999 999999975 45999999999998877777778
Q ss_pred eEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEE
Q 010125 252 LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWV 331 (517)
Q Consensus 252 ~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~ 331 (517)
.+|+++.++|++|.++|+++|+++|++||+|+|+|+||+.+....+.......++.++|++++++|||+++|+++|++++
T Consensus 150 ~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~ 229 (345)
T cd06450 150 IMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLV 229 (345)
T ss_pred EEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHH
Confidence 88999999999999999999999999999999999999988876544443334456899999999999999999998765
Q ss_pred eCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC
Q 010125 332 KDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK 411 (517)
Q Consensus 332 ~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~ 411 (517)
+ ++++|++++.++.+++++++++..++++++.+.|++++
T Consensus 230 ~-----------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~ 268 (345)
T cd06450 230 R-----------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADP 268 (345)
T ss_pred H-----------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4 56789999999999999999999999999999999999
Q ss_pred CeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCC
Q 010125 412 RFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATL 491 (517)
Q Consensus 412 ~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 491 (517)
+++++.+++.++++|++.+.. +.+..+.++.++|.++|.+++++..+.+..++|+++++++
T Consensus 269 ~~~~~~~~~~~iv~f~~~~~~-------------------~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~ 329 (345)
T cd06450 269 GFELLGEPNLSLVCFRLKPSV-------------------KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPL 329 (345)
T ss_pred CeEEecCCceeEEEEEECCcc-------------------hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCC
Confidence 999887788999999986520 0123456788888888877777766667789999998777
Q ss_pred CcHHHHHHHHHHHHH
Q 010125 492 TEKRHVVVAWTVVQQ 506 (517)
Q Consensus 492 t~~~di~~l~~~l~~ 506 (517)
++++|++++++.|++
T Consensus 330 ~t~~di~~l~~~l~~ 344 (345)
T cd06450 330 TTRDDADALLEDIER 344 (345)
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999999999875
No 14
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.1e-35 Score=287.69 Aligned_cols=394 Identities=16% Similarity=0.188 Sum_probs=309.1
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCc-cceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHH
Q 010125 64 ESAPNNPESMETILQDVQQHIVPGITHWQSPN-YFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWL 142 (517)
Q Consensus 64 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l 142 (517)
..+|++|.+-+++++.+.+..+-+...+..+. +.-|. ..+..-..+.+.+... |...-+..|+.+.+|.++++++
T Consensus 54 ~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~-~~~~~~~l~~~~~~k~---N~l~~d~fp~~~~~e~~~Vnm~ 129 (491)
T KOG1383|consen 54 FTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYW-GEPELDKLIMEAYNKF---NPLHPDEFPVVRKLEAECVNMI 129 (491)
T ss_pred ecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEec-CCcchhhHHHHHHhhc---CccCccccchhHHHHHHHHHHH
Confidence 46899999999999999987665544222221 22222 2333333333333333 5556677899999999999999
Q ss_pred HHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEE
Q 010125 143 GQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAI 222 (517)
Q Consensus 143 ~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~v 222 (517)
+.||+.+++ ..|..|+|||+|.+.+....+++.... .++..+.++++...|.+++|+++.+++ .++.|
T Consensus 130 ~~L~~~~~~------~~g~~t~G~Ses~l~~~k~~~~~r~~~---k~I~~p~iv~~~~v~~a~eK~a~yf~v---~l~~V 197 (491)
T KOG1383|consen 130 ANLFNAPSD------SCGCGTVGGSESGLAAKKSYRNRRKAQ---KGIDKPNIVTPQNVHAAFEKAARYFEV---ELREV 197 (491)
T ss_pred HHHhcCCcc------ccCccccccchHHHHHHHHHHHHHHhc---cCCCCccccchHHHHHHHHHHHhhEEE---EEEee
Confidence 999999865 378999999999888888888765443 344677888899999999999999999 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHH-hCCeEEccccccccccc-Ccccc
Q 010125 223 KTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQ-FGIWVHVDAAYAGSACI-CPEFR 300 (517)
Q Consensus 223 p~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~-~gi~lhvDaA~g~~~~~-~~~~~ 300 (517)
|+++ +++++|+..+.+.+++++. +|++++|++++|.+||+++|+++.-+ +++.+|||+|-||+..+ .....
T Consensus 198 ~~~~-~~~~~D~~k~~~~i~eNti------~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 198 PLDE-GDYRVDPGKVVRMIDENTI------MLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred eccc-cceEecHHHHHHHhccceE------EEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 9997 5799999999999999874 89999999999999999999999998 99999999999999875 21111
Q ss_pred cccc-CCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCc-hHHH
Q 010125 301 HFID-GVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRS-LKLW 378 (517)
Q Consensus 301 ~~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~ 378 (517)
..++ +..++.|++.|.||++.+|.|.|+++.|++..+...+.....|+.+- +..+|+.+||.... ...|
T Consensus 271 ~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~---------y~s~TlngSR~g~~va~~w 341 (491)
T KOG1383|consen 271 EEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI---------YASPTLNGSRPGSQVAAQW 341 (491)
T ss_pred cccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCcc---------ccCcccccCCcccHHHHHH
Confidence 1122 34589999999999999999999999999988766677777787643 45678999998544 6889
Q ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHH
Q 010125 379 FVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNR 458 (517)
Q Consensus 379 ~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (517)
+++..+|.+||.+..+++.+.++.|++.|++++++.++.+|..+++.|.-..- + --
T Consensus 342 a~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~----------------------~--i~ 397 (491)
T KOG1383|consen 342 AALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDV----------------------N--IF 397 (491)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCcc----------------------c--hh
Confidence 99999999999999999999999999999999999999887755555532211 1 24
Q ss_pred HHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhhcC
Q 010125 459 ELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQSAFK 516 (517)
Q Consensus 459 ~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~~~~ 516 (517)
++.+.|.+.|+..-..+-. ..+.+|++-.++.++-.++++..|+++.+++...++
T Consensus 398 elsd~l~~~GW~lnalq~P---~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~ 452 (491)
T KOG1383|consen 398 ELSDLLRKKGWILNALQFP---AAIHICVTRVHAREDVADRFVADIRKVVEELKSLPE 452 (491)
T ss_pred hhhHHHHhcCcCccccCCC---CceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 6677788889875443322 256777765566776689999999999999887654
No 15
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=8e-35 Score=298.93 Aligned_cols=367 Identities=20% Similarity=0.267 Sum_probs=269.5
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCc
Q 010125 71 ESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPK 150 (517)
Q Consensus 71 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~ 150 (517)
.+.+++|+.+++...++.. .. +||+...+. ..|.++ +.+...+..+.......+....+++++.+++++++|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~-~~~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~ 76 (371)
T PRK13520 2 LSEEEILEELEEYRSEDLK-YE--RILSSMCTE-PHPIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPD 76 (371)
T ss_pred CCHHHHHHHHHHHHhcCCC-HH--HeeeeeecC-chHHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC
Confidence 4678999999987666543 33 578876543 444443 445444433222212235677888999999999999976
Q ss_pred ccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCc
Q 010125 151 SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSY 230 (517)
Q Consensus 151 ~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~ 230 (517)
. .+++++|||++|..++.+++... . .+++.|++++.+|+++.++++..|+ +++.||++. ++
T Consensus 77 ~-------~~~~~~ggt~a~~~a~~~~~~~~-----~--~~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~--~~ 137 (371)
T PRK13520 77 A-------YGYITSGGTEANIQAVRAARNLA-----K--AEKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDD--DY 137 (371)
T ss_pred C-------CeEEecCcHHHHHHHHHHHHhhc-----c--CCCceEEecCcchHHHHHHHHHcCc---eEEEecCCC--CC
Confidence 4 57899999999999988876531 0 1356789999999999999999999 999999875 56
Q ss_pred ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCcccccccc-CCCCC
Q 010125 231 GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVEGA 309 (517)
Q Consensus 231 ~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~-g~~~a 309 (517)
.+|+++|+++|++++ .+|+++.++|++|.++|+++|+++|++||+++|||+||+++.+........++ ...++
T Consensus 138 ~~d~~~l~~~i~~~~------~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~v 211 (371)
T PRK13520 138 RVDVKAVEDLIDDNT------IGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGV 211 (371)
T ss_pred cCCHHHHHHHHhhCC------EEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCC
Confidence 899999999997653 36777888999999999999999999999999999999887643211110011 13479
Q ss_pred CeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHHH
Q 010125 310 DSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVAN 388 (517)
Q Consensus 310 Dsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g 388 (517)
|++++++|||+.+|.++|+++++++.... .+....+|+.... .+...+++. ...+++|.+++.++.+|
T Consensus 212 d~~~~s~~K~~~a~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~al~~l~~~g 280 (371)
T PRK13520 212 DSITIDPHKMGLAPIPAGGILFRDESYLD-ALAVDTPYLTSKK----------QATLTGTRSGAGVAATYAVMKYLGREG 280 (371)
T ss_pred ceEEECCccccCccCCceEEEEcCHHHHH-hhcccCccccCCC----------CcceEeeccChHHHHHHHHHhhhcHhH
Confidence 99999999999999999999998775433 3333334543221 112233443 24568899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcC
Q 010125 389 LRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASG 468 (517)
Q Consensus 389 ~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 468 (517)
++++.++..++++++.+.|+++ +++++.++..++++|.+.+ ..++.++|.++|
T Consensus 281 ~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~--------------------------~~~v~~~L~~~g 333 (371)
T PRK13520 281 YRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN--------------------------PDEVREKLRERG 333 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC--------------------------HHHHHHHHHHCC
Confidence 9999999999999999999987 8885556677888887642 245666676778
Q ss_pred cEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 469 KAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 469 ~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
+.. ... .+..++|++++ +.++++||+++++.|+++.+
T Consensus 334 i~v-~~~--~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 334 WRV-SVT--RCPEALRIVCM-PHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred cee-ccC--CCCCEEEEEEE-CCCCHHHHHHHHHHHHHHhh
Confidence 643 322 23457999985 57889999999999987654
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=2.6e-34 Score=295.43 Aligned_cols=366 Identities=18% Similarity=0.243 Sum_probs=266.2
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCccc
Q 010125 73 METILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSF 152 (517)
Q Consensus 73 ~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~ 152 (517)
.+++|+.+.+ ++.+.++.++++++..+...+.++. .+.+..++..+.......|....+++++.+++++++|+++.
T Consensus 2 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~- 77 (373)
T TIGR03812 2 EEEVLEELKE-YRSEDLKYSDGRILGSMCTNPHPIA--VKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPDA- 77 (373)
T ss_pred HHHHHHHHHH-HHhcCCCCCCCcEEEEEeCCchHHH--HHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC-
Confidence 5789999998 5778888889998888766544442 22233332222111112356778889999999999999765
Q ss_pred ccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCccc
Q 010125 153 LFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGL 232 (517)
Q Consensus 153 ~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~ 232 (517)
.+++++|||++++.++.+++..... +.+++.|++++.+|+++.++++..|+ +++.+|++. ++.+
T Consensus 78 ------~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~--~~~~ 141 (373)
T TIGR03812 78 ------YGYIVSGGTEANIQAVRAAKNLARE-----EKRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDE--DYTV 141 (373)
T ss_pred ------CeEEeccHHHHHHHHHHHHHHHHhc-----cCCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCC--CCCc
Confidence 5788999999998887766542111 01446788999999999999999999 999999874 5789
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccc---ccccc-CCCC
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF---RHFID-GVEG 308 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~---~~~~~-g~~~ 308 (517)
|+++|++++++++ ..++.+.++|++|.++|+++|+++|++||+|+|||+||+++.+..... ...++ ...+
T Consensus 142 d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~ 215 (373)
T TIGR03812 142 DVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPG 215 (373)
T ss_pred CHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCC
Confidence 9999999997653 245555589999999999999999999999999999998775432110 00111 1237
Q ss_pred CCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHH
Q 010125 309 ADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVA 387 (517)
Q Consensus 309 aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~ 387 (517)
+|++++++|||+.+|.++|.+++++++.+. .+....+|+.... .+...++|. ...+++|.+++.++.+
T Consensus 216 ~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~~l~~l~~~ 284 (373)
T TIGR03812 216 VQSITIDPHKMGLSPIPAGGILFRSKSYLK-YLSVDAPYLTVKK----------QATITGTRSGASAAATYAVIKYLGRE 284 (373)
T ss_pred CCEEEECccccCCCcCCceEEEEeCHHHHh-hhcccCcccCCCC----------CcceEeechhHHHHHHHHHHHHhCHH
Confidence 899999999999899999988887765442 3333334543211 112234554 3456888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhc
Q 010125 388 NLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINAS 467 (517)
Q Consensus 388 g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 467 (517)
+++++.++..+++++|++.|+++ +++.+.++..++++|+.... ..+.++|.++
T Consensus 285 g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~~--------------------------~~v~~~L~~~ 337 (373)
T TIGR03812 285 GYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDDP--------------------------EEVRKKLRDR 337 (373)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCCH--------------------------HHHHHHHHHC
Confidence 99999999999999999999998 56555467788888876421 3567777777
Q ss_pred CcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 468 GKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 468 g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
|+. +... .+..++|++++ ..++++|+++++++|++
T Consensus 338 gi~-v~~~--~~~~~iRis~~-~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 338 GWY-VSVT--RCPKALRIVVM-PHVTREHIEEFLEDLKE 372 (373)
T ss_pred Cce-eccC--CCCCEEEEEEE-CCCCHHHHHHHHHHHhh
Confidence 764 3332 23468999996 46788899999999975
No 17
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-33 Score=276.25 Aligned_cols=342 Identities=14% Similarity=0.098 Sum_probs=256.8
Q ss_pred CccceeCCCCCChHHHHHHHHHh---c-ccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHH
Q 010125 94 PNYFAYFPSSGSIAGFLGEMLSS---G-FNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 169 (517)
Q Consensus 94 p~~~~~~~~~~~~~~~~~~~l~~---~-~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 169 (517)
+-||+|..+++..|.++..|+.. . .|+++ .+..+..+..+-++.++.+++++|.++. .++|||||||+
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS-~H~~G~~A~~~ve~AR~~iA~llga~~~-------eIiFTSG~TEs 73 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSS-LHSFGREARKAVEEAREQIAKLLGADPE-------EIIFTSGATES 73 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccc-hhHhHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEecCCcHH
Confidence 45899998888888887665433 3 36655 4445666666667889999999999885 79999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHh
Q 010125 170 ILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV---GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVE 246 (517)
Q Consensus 170 ~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~---G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~ 246 (517)
|++|+..+.....++ ..+-.|++|...|.++...++.+ |+ .|.++|++. +|.+|+++|+++|++++
T Consensus 74 nNlaI~g~~~a~~~~-----~~~~HIIts~iEH~aVl~~~~~Le~~g~---~Vtyl~V~~--~G~v~~e~L~~al~~~T- 142 (386)
T COG1104 74 NNLAIKGAALAYRNA-----QKGKHIITSAIEHPAVLNTCRYLERQGF---EVTYLPVDS--NGLVDLEQLEEALRPDT- 142 (386)
T ss_pred HHHHHHhhHHhhhcc-----cCCCeEEEcccccHHHHHHHHHHHhcCC---eEEEeCCCC--CCeEcHHHHHHhcCCCc-
Confidence 999998753332111 13446999999999999999999 88 999999986 67999999999999887
Q ss_pred cCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcc
Q 010125 247 VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDC 326 (517)
Q Consensus 247 ~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 326 (517)
.+|.+.+.++.+|.+.||++|+++|+++|+++|||++++.+-++.+-.. . .+|.++++.||+. +|.|+
T Consensus 143 -----~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~-~-----~vD~ls~SaHK~~-GpkGi 210 (386)
T COG1104 143 -----ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEE-L-----GVDLLSFSAHKFG-GPKGI 210 (386)
T ss_pred -----eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccc-c-----CcceEEeehhhcc-CCCce
Confidence 4899999999999999999999999999999999999999887765321 1 5999999999986 59999
Q ss_pred eEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHH------HHHHHhcHHHHHHHHHHHHHHH
Q 010125 327 CCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLW------FVIRNYGVANLRHFLRSHVNMA 400 (517)
Q Consensus 327 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~------~~l~~~g~~g~~~~i~~~~~~a 400 (517)
|++|+|+.-.+ .+.+.++ +.+.++|.....+. .+++ +..+.+.....+...++
T Consensus 211 GaLyv~~~~~~-------~p~i~GG-------------gQE~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr 269 (386)
T COG1104 211 GALYVRPGVRL-------EPLIHGG-------------GQERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLRKLR 269 (386)
T ss_pred EEEEECCCCcc-------CceeccC-------------cCCCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 99999654322 1233332 33556665543322 2222 24566777888899999
Q ss_pred HHHHHHHhcC-CCeEEecCC---CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeee
Q 010125 401 KLFERLVSGD-KRFEIVFPC---HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAV 476 (517)
Q Consensus 401 ~~l~~~l~~~-~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 476 (517)
++|.+.|.+. |++.+...+ --++++|.+.... .+.+.-.|...|+.. +.+.
T Consensus 270 ~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~------------------------gE~ll~~L~~~gI~v-StGS 324 (386)
T COG1104 270 DRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE------------------------GESLLLALDLAGIAV-STGS 324 (386)
T ss_pred HHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc------------------------HHHHHHhccccCeEE-eccc
Confidence 9999999865 888876542 2356667665431 244555555556532 2211
Q ss_pred E--------------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 477 L--------------------GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 477 ~--------------------~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
- .-...||||+ +..|+++||+++++.++++.+++++
T Consensus 325 ACsS~~~~pShVL~AmG~~~e~a~~siR~S~-g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 325 ACSSGSLEPSHVLRAMGISEELAHGSIRFSL-GRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred cccCCCCCccHHHHHcCCChHHhCccEEEEc-CCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 0 1246899999 5788999999999999999998865
No 18
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-33 Score=286.33 Aligned_cols=352 Identities=17% Similarity=0.158 Sum_probs=264.8
Q ss_pred ccceeCCCCCChHHHHHHHHHhcc---cccc--cccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHH
Q 010125 95 NYFAYFPSSGSIAGFLGEMLSSGF---NIVG--FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 169 (517)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~---n~~~--~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 169 (517)
.||++..++. .|..+.+.+..++ |.|. ..+..+..+++.++++++.+++++|.++. ..++||.|+|+|
T Consensus 24 vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~------~eIvft~~tT~a 96 (405)
T COG0520 24 VYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS------DEIVFTRGTTEA 96 (405)
T ss_pred EEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC------CeEEEeCChhHH
Confidence 5777765555 6777777776653 3332 35556667788899999999999999852 279999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhH
Q 010125 170 ILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA----LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDV 245 (517)
Q Consensus 170 ~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s----~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~ 245 (517)
+.......... .+ +++.|++|+..|+| |...++..|+ +++.+|+++ ++.++.+++++.+++.+
T Consensus 97 ln~va~~l~~~-~~-------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~--~g~~~~~~~~~~i~~~T 163 (405)
T COG0520 97 LNLVARGLGRS-LK-------PGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDD--DGLLDLDALEKLITPKT 163 (405)
T ss_pred HHHHHHHhhhh-hc-------CCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCC--CCCcCHHHHHHhcCCCc
Confidence 87655544221 11 56789999999987 5566777799 999999984 67999999999888877
Q ss_pred hcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc
Q 010125 246 EVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD 325 (517)
Q Consensus 246 ~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~ 325 (517)
+ +|.+++.+|.+|.+.|+++|+++||++|+|+.|||||+.+.+..+- +.+ ++|++.+++|||+++|.|
T Consensus 164 k------lvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv-~~l-----~~Df~afsgHKwl~gP~G 231 (405)
T COG0520 164 K------LVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDV-QEL-----GCDFLAFSGHKWLLGPTG 231 (405)
T ss_pred e------EEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCc-hhc-----CCCEEEEcccccccCCCc
Confidence 5 8999999999999999999999999999999999999999887753 222 899999999999999999
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccc-c-----ccccccCCCccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHH
Q 010125 326 CCCLWVKDPRALVSSLSTNPEYLKNKAT-E-----SMQVVDYKDWQITLSRR--FRSLKLWFVIRNYGVANLRHFLRSHV 397 (517)
Q Consensus 326 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~-~-----~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~i~~~~ 397 (517)
+|++++|+.... + + .++..+... + ....+....+.++.+.. ...+.+-++++.+...|+.++.++..
T Consensus 232 iGvLy~r~~~l~-~-l---~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 232 IGVLYVRKELLE-E-L---EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER 306 (405)
T ss_pred eEEEEEchHHHh-h-c---CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence 999999876432 1 1 233322211 0 01111222333343333 23356777888888888999999999
Q ss_pred HHHHHHHHHHhcCCCeEEecCC---CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEee
Q 010125 398 NMAKLFERLVSGDKRFEIVFPC---HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTH 474 (517)
Q Consensus 398 ~~a~~l~~~l~~~~~~~l~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 474 (517)
.+++++.+.|+++|+++++.++ ..++++|.+.... ...+...|.++|++ +..
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~------------------------~~dv~~~L~~~gI~-vr~ 361 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH------------------------PHDVATLLDEKGIA-VRA 361 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC------------------------HHHHHHHHHhCCeE-EEe
Confidence 9999999999999999999865 5889999997642 46677778888843 332
Q ss_pred eeEC--------C-EeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 475 AVLG--------G-IYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 475 ~~~~--------g-~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
.... + ...+|+|+ ++++|++|||+++++|+++.+
T Consensus 362 g~~ca~p~~~~~~~~~~iR~S~-~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 362 GHHCAQPLHRLLGVDATIRASL-HLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred ccccccHHHHhcCCCCceEEEE-eecCCHHHHHHHHHHHHHHhh
Confidence 2111 1 23399999 578889999999999998754
No 19
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=1e-30 Score=284.96 Aligned_cols=384 Identities=14% Similarity=0.113 Sum_probs=274.1
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcccccccccc-----cChhhHHHHHHHHHHHHHHc
Q 010125 72 SMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWI-----SSPAATELENIVMDWLGQML 146 (517)
Q Consensus 72 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~-----~sp~~~~lE~~v~~~l~~l~ 146 (517)
+..++++.+.++-..+..- .+ .|++--.. ......+.+++...++....... .+.+..+++.++..||++++
T Consensus 467 sE~e~~r~~~~L~~kn~~~-~~-~fi~lGsc-tmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~elt 543 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLAL-NN-SMIPLGSC-TMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSIT 543 (939)
T ss_pred CHHHHHHHHHHHHhcCCCc-cc-cCCCCccC-CCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHH
Confidence 8889999999875555332 12 34332222 33344566677555544333222 34458899999999999999
Q ss_pred CCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCC
Q 010125 147 KLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTK 226 (517)
Q Consensus 147 g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~ 226 (517)
|++. .++..++|++|++++++++|... ...|.. ++.+|++|+.+|.+..+++...|+ +++.||+++
T Consensus 544 Gmd~--------~Sl~p~aGA~gE~agL~aiR~y~-~~rge~--~R~~vlip~saHgtnPasa~~~G~---~Vv~V~~d~ 609 (939)
T TIGR00461 544 GFDA--------ISLQPNSGAQGEYAGLRVIRSYH-ESRGEN--HRNICLIPVSAHGTNPASAAMAGM---QVVPVNCDQ 609 (939)
T ss_pred CCCC--------cccCCchHHHHHHHHHHHHHHHH-HhcCCC--CCCEEEEEccccCcCHHHHHHCCC---EEEEeccCC
Confidence 9994 46788889999999999988643 222332 577899999999999999999999 999999974
Q ss_pred CCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC-hhHHHHHHHHhCCeEEcccccccccccCccccccccC
Q 010125 227 SSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP-LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG 305 (517)
Q Consensus 227 ~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp-l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g 305 (517)
+|.+|+++|+++|++ .+..+.+|++++++| +|.++| +++|+++||++|.|++||||+.......... +
T Consensus 610 --~G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~P-----g 678 (939)
T TIGR00461 610 --DGNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSP-----G 678 (939)
T ss_pred --CCCcCHHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCc-----c
Confidence 579999999999975 223467899999998 799977 9999999999999999999996644333222 2
Q ss_pred CCCCCeeeeccccccCCCCcc-----eEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCc----hH
Q 010125 306 VEGADSFSLNAHKWFFATLDC-----CCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRS----LK 376 (517)
Q Consensus 306 ~~~aDsi~~~~hK~l~~p~~~-----g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a----l~ 376 (517)
..++|++++|.||+|+.|.|+ |++.+|+. +...+... . +.......+.. .+.....++.+++ ++
T Consensus 679 ~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~-~-v~~t~d~~gre---q~Iga~s~~~~g~a~~~l~ 751 (939)
T TIGR00461 679 DLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKH-D-VVSMITGIGGS---KSIGSVSAAPYGSASILPI 751 (939)
T ss_pred ccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCC-c-ccccccCCCCc---cccccccccccCcHHHHHH
Confidence 238999999999999977666 99999864 32222111 1 11100000000 0112223344555 89
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCeeEEEEEecCCCcchhhhhhhhhccccchHHH
Q 010125 377 LWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP----CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQ 452 (517)
Q Consensus 377 ~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (517)
.|+.++.+|.+|+++..+....+|+|++++|++ +++++.+ +.+.-++|++.+.. +.
T Consensus 752 a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~------------------~~ 811 (939)
T TIGR00461 752 SWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK------------------AK 811 (939)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh------------------hh
Confidence 999999999999999999999999999999987 5677654 34556888886531 12
Q ss_pred HHHHHHHHHHHHHhcCcEEEeee-eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 453 INEFNRELLESINASGKAYMTHA-VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 453 ~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
.+..+.++.++|.+.|....+.+ ...|...+|.+- .++++|||++++++.++.+++.+
T Consensus 812 ~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE---~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 812 TGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTE---SESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred cCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeec---cCCHHHHHHHHHHHHHHHHHHHH
Confidence 23456788999999998654432 334544555543 67889999999999999888765
No 20
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=1.2e-30 Score=274.91 Aligned_cols=402 Identities=15% Similarity=0.098 Sum_probs=266.1
Q ss_pred ChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhc-cccccccc---ccCh
Q 010125 54 EPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSG-FNIVGFNW---ISSP 129 (517)
Q Consensus 54 ~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~~~---~~sp 129 (517)
-|..++..-+..+|+ .+..++++++.+....+.... ..|.|.-.+...+|..+.+.+... ...+.+.| ..+.
T Consensus 34 ip~~~~~~~~~~~~~--~se~~~~~~~~~l~~~n~~~~--~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sq 109 (481)
T PRK04366 34 LPEELLRKEPPELPE--VSELEVVRHYTRLSQKNYGVD--TGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQ 109 (481)
T ss_pred CCHHHhcCCCCCCCC--CCHHHHHHHHHHHHhcCCCCC--cceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhh
Confidence 355565433445677 899999999998766664322 256666533433444444444433 22345566 4567
Q ss_pred hhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH
Q 010125 130 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA 209 (517)
Q Consensus 130 ~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa 209 (517)
+..++..++.+|+++++|+++. .+..++|+.+.+.++.+++....++ |+ .++..|++++..|.++..++
T Consensus 110 G~lel~~~~~~~la~l~G~~~~--------~l~~~~GA~a~~~~l~~~r~~~~~~-Gd--~~~~~Vlv~~~~hp~~~~~~ 178 (481)
T PRK04366 110 GALELMYELQEWLKEITGMDAV--------TLQPAAGAHGELTGLLMIRAYHEAR-GD--TKRTEVIVPDSAHGTNPASA 178 (481)
T ss_pred HHHHHHHHHHHHHHHHhCCCce--------EEEeCcHHHHHHHHHHHHHHHhhcc-Cc--CCCCEEEEcCCccHhHHHHH
Confidence 7889999999999999999742 4555677777776666554322111 11 13457889999999999999
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc-cChhHHHHHHHHhCCeEEcccc
Q 010125 210 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAA 288 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i-dpl~eI~~i~~~~gi~lhvDaA 288 (517)
+..|+ +++.+|++. +|.+|+++|+++++++++ +|+++.++ ++|.+ +|+++|+++|+++|+|+|||+|
T Consensus 179 ~~~G~---~vv~v~~~~--~~~~D~e~L~~~i~~~t~------~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a 246 (481)
T PRK04366 179 AMAGF---KVVEIPSNE--DGLVDLEALKAAVGEDTA------ALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGA 246 (481)
T ss_pred HHcCC---EEEEeecCC--CCCcCHHHHHhhcccCCe------EEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEec
Confidence 99999 999999964 579999999999976653 67778877 89988 6899999999999999999999
Q ss_pred cccccccCccccccccCCCCCCeeeeccccccCCCCcc-----eEEEEeCchhHHhhhcCCccccCCccccccccccC-C
Q 010125 289 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDC-----CCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDY-K 362 (517)
Q Consensus 289 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~-----g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~-~ 362 (517)
+..+.+..... +-.++|++++++||||++|.++ |+++++++. .+.+ ++.+...... .....+ .
T Consensus 247 ~~~~~~g~~~~-----~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~~--~~~l---p~~~v~~~g~-~~~l~~~r 315 (481)
T PRK04366 247 NLNAILGKARP-----GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEEL--APFL---PVPVVEKDGD-RYRLDYDR 315 (481)
T ss_pred ChhhhcccCCc-----cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhhh--HhhC---CCCeeeccCC-ceeecccc
Confidence 96553321111 1237999999999999988766 488887642 2222 1111110000 000001 1
Q ss_pred CccccCCCCCC-----chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEecCCCcchh
Q 010125 363 DWQITLSRRFR-----SLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP-CHFAVVCFRVSPSPVLMD 436 (517)
Q Consensus 363 ~~~~~~sr~~~-----al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~ 436 (517)
...+...+.+. ++++|..+..+|.+|++++.++...++++|+++|+++ +++..+ +....+.|....-..
T Consensus 316 ~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~--- 390 (481)
T PRK04366 316 PKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKE--- 390 (481)
T ss_pred cccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccc---
Confidence 11111222222 3688889999999999999999999999999999887 444322 333334443221000
Q ss_pred hhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhhc
Q 010125 437 KLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAV-LGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQSAF 515 (517)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~~~ 515 (517)
. +....++.++|.++|+....... ......+|+|++ ..++++|||+++++|.++.+++.++.
T Consensus 391 ------------~----g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is~~-e~~t~edid~l~~~l~~i~~~~~~~~ 453 (481)
T PRK04366 391 ------------T----GVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIEPT-ETESKETLDAFIAAMKQIAEEAKENP 453 (481)
T ss_pred ------------c----CCCHHHHHHHHHHCCccCCccccccccCCeEEEccc-CCCCHHHHHHHHHHHHHHHHHHHhCc
Confidence 0 11246678888888875321110 111347999984 67888999999999999998877643
No 21
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.98 E-value=6.7e-30 Score=283.71 Aligned_cols=383 Identities=13% Similarity=0.098 Sum_probs=262.4
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhccccc--cccc---ccChhhHHHHHHHHHHHHHH
Q 010125 71 ESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIV--GFNW---ISSPAATELENIVMDWLGQM 145 (517)
Q Consensus 71 ~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~--~~~~---~~sp~~~~lE~~v~~~l~~l 145 (517)
.+..++++.++++-..+.....+..++|.. .....|.. ++....++.. .+.| +.+.+..+++.++.+|++++
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGsc-t~~~~p~~--~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~el 554 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGSC-TMKLNAAA--EMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEI 554 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCcC-CCcCCHHH--HHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 488899999999876665544455567763 22222322 2333333322 2222 23456889999999999999
Q ss_pred cCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecC
Q 010125 146 LKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTT 225 (517)
Q Consensus 146 ~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d 225 (517)
+|++.. .+..+||++|++.+|+++|.... +.|+. ++.+|++|+.+|.|+.+++..+|+ +++.||++
T Consensus 555 tG~d~~--------sl~~~~ga~ge~agL~a~r~~~~-~~G~~--~r~~vlis~~aH~snp~sa~~~G~---~vv~v~~d 620 (954)
T PRK05367 555 TGYDAV--------SLQPNAGAQGEYAGLLAIRAYHE-SRGEG--HRDVCLIPSSAHGTNPASAVMAGM---KVVVVACD 620 (954)
T ss_pred HCCCCE--------EECccHHHHHHHHHHHHHHHHhh-ccCCC--CCCEEEEEchhhhhhHHHHHHCCC---EEEEECCC
Confidence 999842 34456788999888887775322 22332 456899999999999999999999 99999998
Q ss_pred CCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccC
Q 010125 226 KSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG 305 (517)
Q Consensus 226 ~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g 305 (517)
. +|++|+++|++++++. +..+++|+++.++|..+..+|+++|+++||++|+|+|||||+.++.+..... +
T Consensus 621 ~--~G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~p-----g 690 (954)
T PRK05367 621 E--NGNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARP-----G 690 (954)
T ss_pred C--CCCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCCh-----h
Confidence 5 5799999999999753 1246788999999874445899999999999999999999997664433221 2
Q ss_pred CCCCCeeeeccccccCCCCcce-----EEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCC----CchH
Q 010125 306 VEGADSFSLNAHKWFFATLDCC-----CLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRF----RSLK 376 (517)
Q Consensus 306 ~~~aDsi~~~~hK~l~~p~~~g-----~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~----~al~ 376 (517)
..++|++++|+||||+.|.|+| ++++|+. +. +|+......... +-...+...+.++ .++.
T Consensus 691 ~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~-------p~lpg~~v~~~~--~~~~~g~v~ta~~g~al~~~~ 759 (954)
T PRK05367 691 DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LA-------PFLPGHPVQIAG--GETGIGAVSAAPFGSASILPI 759 (954)
T ss_pred hcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--cc-------ccCCCCccCcCC--CCCCcCcchhHHHHHHHHHHH
Confidence 2389999999999999888755 8988742 22 222211100000 0000111122222 3356
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--C--CCeeEEEEEecCCCcchhhhhhhhhccccchHHH
Q 010125 377 LWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF--P--CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQ 452 (517)
Q Consensus 377 ~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~--~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (517)
.|+.++.+|.+|++++.++.+.+|+|++++|++. +++.. + +...-++|.+.+... .
T Consensus 760 a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~------------------~ 819 (954)
T PRK05367 760 SWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKE------------------S 819 (954)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccc------------------c
Confidence 8999999999999999999999999999999874 44432 1 223445565543210 0
Q ss_pred HHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 453 INEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 453 ~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
.+..+..+.++|.+.|....+. .+.....+|++++ ..++++|||+++++|+++.+++.+
T Consensus 820 ~g~~~~di~krL~d~G~~~~t~-~~pv~~~l~i~pt-E~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 820 TGITVDDIAKRLIDYGFHAPTM-SFPVAGTLMVEPT-ESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CCCCHHHHHHHHHHCCCeEeec-CCccCCEEEEEee-ecCCHHHHHHHHHHHHHHHHHHHH
Confidence 0112467888888889765442 2323456899985 578889999999999999888765
No 22
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=1.6e-28 Score=252.92 Aligned_cols=341 Identities=12% Similarity=0.074 Sum_probs=234.8
Q ss_pred cceeCCCCCChHHHHHHHHHhcccc---c-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGFNI---V-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL 171 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~n~---~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~ 171 (517)
||++...++.++.+ .+.+...+.. + ...+..++....+.+++++++++++|.+++ .++||+|+|+++.
T Consensus 2 yld~aa~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~t~~~t~a~~ 73 (379)
T TIGR03402 2 YLDNNATTRVDPEV-LEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-------EIIFTSGGTESDN 73 (379)
T ss_pred cCCCcCCCCCCHHH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence 67777666665554 4444333321 1 112223345566777899999999998754 6899999999999
Q ss_pred HHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcC
Q 010125 172 CTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI---VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVG 248 (517)
Q Consensus 172 ~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~---~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g 248 (517)
.++....... .++.+|+++..+|+++...+.. .|+ +++.+|++. ++.+|+++|++++++++
T Consensus 74 ~al~~~~~~~--------~~~~~vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~--~g~~~~~~l~~~i~~~~--- 137 (379)
T TIGR03402 74 TAIKSALAAQ--------PEKRHIITTAVEHPAVLSLCQHLEKQGY---KVTYLPVDE--EGRLDLEELRAAITDDT--- 137 (379)
T ss_pred HHHHHHHHhc--------CCCCeEEEcccccHHHHHHHHHHHHcCC---EEEEEccCC--CCcCCHHHHHHhcCCCc---
Confidence 8887664310 0346788889999987765443 487 999999874 46899999999997644
Q ss_pred CcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceE
Q 010125 249 LIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC 328 (517)
Q Consensus 249 ~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 328 (517)
.+|++++.++++|.+.|+++|+++|++||+++|+|++|+.+....+- .. .++|++++++|| +++|.|+|+
T Consensus 138 ---~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~-~~-----~~~D~~~~s~~K-~~gp~G~g~ 207 (379)
T TIGR03402 138 ---ALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDL-KE-----MNIDMLSLSGHK-LHGPKGVGA 207 (379)
T ss_pred ---EEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCc-cc-----CCCCEEEEcHHH-cCCCCceEE
Confidence 47888999999999999999999999999999999999876554431 11 279999999999 667999999
Q ss_pred EEEeCchhHHhhhcCCccccCCccccccccccCCCccccCC-CCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010125 329 LWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLS-RRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERL 406 (517)
Q Consensus 329 l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s-r~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~ 406 (517)
+++++... ..+ ++..... ....+.+ ... ..+.+..+++.. .++++++.++..++++++.+.
T Consensus 208 l~v~~~~~------~~p-~~~g~~~---------~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~ 270 (379)
T TIGR03402 208 LYIRKGTR------FRP-LLRGGHQ---------ERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAG 270 (379)
T ss_pred EEECCCCC------CCC-cccCCcc---------CCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHH
Confidence 99986531 111 2211100 0001111 111 113444445443 456788888999999999999
Q ss_pred Hhc-CCCeEEecCCC---eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-----
Q 010125 407 VSG-DKRFEIVFPCH---FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL----- 477 (517)
Q Consensus 407 l~~-~~~~~l~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----- 477 (517)
|++ ++++++..++. .+++.|.+.... ..++.+.|.++|+..-++...
T Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~gI~v~~g~~c~~~~~ 326 (379)
T TIGR03402 271 LLARIPDARLNGDPTKRLPNTVNISFEYIE------------------------GEAILLLLDMEGICASSGSACTSGSL 326 (379)
T ss_pred HHhhCCCEEEeCCCccCCCCEEEEEecCCC------------------------HHHHHHhhccCCEEEEchhhcCCCCC
Confidence 985 88998876432 347777765331 235566666667543322110
Q ss_pred --------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 478 --------------GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 478 --------------~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
.....+|+|+ ++.+|++||+++++.|+++.+++.
T Consensus 327 ~~~~~~~~lg~~~~~~~~~vR~S~-~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 327 EPSHVLRAMGVPHTAAHGSIRFSL-SRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred CcCHHHHHcCCChhhcCceEEEEc-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0135899998 678899999999999999887754
No 23
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.97 E-value=1.5e-28 Score=258.51 Aligned_cols=382 Identities=12% Similarity=0.081 Sum_probs=250.4
Q ss_pred CChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHH------Hhcccccccccc
Q 010125 53 VEPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEML------SSGFNIVGFNWI 126 (517)
Q Consensus 53 ~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l------~~~~n~~~~~~~ 126 (517)
.-|++++...+..+|+.+ +.+++++++.+....+.....|++++|.-..+...|..+.+.+ +. +|++...
T Consensus 30 ~~p~~~~~~~~~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~-y~~~~~~-- 105 (447)
T PRK00451 30 DIPEELRLKRPLDLPPGL-SEMELLRHLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTA-YTPYQPE-- 105 (447)
T ss_pred hCCHHHHhCCCCCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHh-cCCCCCc--
Confidence 347888888888899975 9999999999877555544457888874333333343433332 22 4443322
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
.+++..+...+...|+++++|++.+ .+++|+|||+++..++. ++... ++..|++++..|.++.
T Consensus 106 ~~~g~~~~~~e~~~~la~l~g~~~~-------~v~~~~g~t~~~~~~~~-a~~~~---------~g~~Vlv~~~~~~~~~ 168 (447)
T PRK00451 106 ISQGTLQAIFEYQTMICELTGMDVA-------NASMYDGATALAEAALM-AVRIT---------KRKKVLVSGAVHPEYR 168 (447)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCcc-------eEEecCcHHHHHHHHHH-HHHhc---------CCCEEEEeCccCHHHH
Confidence 2456666777778899999999865 68899999976654443 33210 4567889999999999
Q ss_pred HHHHH----cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KAAQI----VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 kaa~~----~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
++++. .|+ +++.+|+++ + ++|+++|+++|+++++ +|+++.+ |++|.++|+++|+++|+++|+|
T Consensus 169 ~~~~~~~~~~G~---~~~~v~~~~--~-~~d~~~l~~~i~~~t~------~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~ 235 (447)
T PRK00451 169 EVLKTYLKGQGI---EVVEVPYED--G-VTDLEALEAAVDDDTA------AVVVQYP-NFFGVIEDLEEIAEIAHAGGAL 235 (447)
T ss_pred HHHHHHHHhCCc---EEEEecCCC--C-CCCHHHHHHhcCCCeE------EEEEECC-CCCCeeCCHHHHHHHHHHCCCE
Confidence 88765 577 999999875 4 8999999999976543 6777777 7899999999999999999999
Q ss_pred EEc--ccccccccccCccccccccCCCCCCeeeeccccc-----cCCCCcceEEEEeCchhHHhhhcCCccccCCccccc
Q 010125 283 VHV--DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKW-----FFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATES 355 (517)
Q Consensus 283 lhv--DaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~-----l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 355 (517)
++| |+.. .+.+..+ +-.++|.++.+.||| ++.| ++|+++++++. .. .+. +.+.......
T Consensus 236 ~iv~~d~~~-~g~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~~-~~-~~~---~~~~g~~~~~ 301 (447)
T PRK00451 236 FIVGVDPVS-LGLLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKKL-VR-QMP---GRLVGETVDA 301 (447)
T ss_pred EEEEcChHH-hccCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHHH-Hh-hCC---CCEeeeeccc
Confidence 998 6443 2222111 112899999999997 4445 79998886532 22 221 1110000000
Q ss_pred cccccC----------CCcccc----CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 010125 356 MQVVDY----------KDWQIT----LSRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCH 420 (517)
Q Consensus 356 ~~~~~~----------~~~~~~----~sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~ 420 (517)
.+...+ ..+... +++. ..+++.+.+++.++.+|++++.++..++++++.+.|+++++++++..+.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 381 (447)
T PRK00451 302 DGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPF 381 (447)
T ss_pred CCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCe
Confidence 000000 000000 0000 1113444456778899999999999999999999999998898874343
Q ss_pred eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEE-EeeeeE--CCEeEEEEEecCCCCcHHHH
Q 010125 421 FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAY-MTHAVL--GGIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 421 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~--~g~~~lR~~~~~~~t~~~di 497 (517)
+..+++++... ..++.++|.++|++. +....+ ....++|++++ ..++++|+
T Consensus 382 ~~~~~v~~~~~-------------------------~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~~-~~~t~e~i 435 (447)
T PRK00451 382 FNEFVVRLPKP-------------------------AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCVT-EKRTKEDI 435 (447)
T ss_pred EEEEEEecCCC-------------------------HHHHHHHHHhcCCCCCcccccccCCcCCEEEEecC-CCCCHHHH
Confidence 44445554211 245677777777641 111111 11358999984 46788899
Q ss_pred HHHHHHHHHHH
Q 010125 498 VVAWTVVQQHL 508 (517)
Q Consensus 498 ~~l~~~l~~~~ 508 (517)
+++++.|+++.
T Consensus 436 ~~l~~~L~~~~ 446 (447)
T PRK00451 436 DALVAALGEVL 446 (447)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
No 24
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=2e-28 Score=251.76 Aligned_cols=346 Identities=14% Similarity=0.116 Sum_probs=236.6
Q ss_pred cceeCCCCCChHHHHHHHHHhcc-----cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGF-----NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 170 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 170 (517)
||++-..++.++.++..+. ..+ |+....+..++...+...++++++++++|.+.. ..+++|+|+|+++
T Consensus 2 yl~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~------~~v~~~~g~t~a~ 74 (373)
T cd06453 2 YLDNAATSQKPQPVIDAIV-DYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSP------DEIIFTRNTTEAI 74 (373)
T ss_pred cccCccccCCCHHHHHHHH-HHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC------CeEEEeCCHHHHH
Confidence 5666555555555443332 222 222234555667788888899999999998732 1688999999998
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH----HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHh
Q 010125 171 LCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL----QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVE 246 (517)
Q Consensus 171 ~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~----~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~ 246 (517)
..++.+.... ..++..|++++.+|++. .+.++..|+ +++.||++. ++.+|+++|++++.+++
T Consensus 75 ~~~~~~l~~~--------~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~- 140 (373)
T cd06453 75 NLVAYGLGRA--------NKPGDEIVTSVMEHHSNIVPWQQLAERTGA---KLKVVPVDD--DGQLDLEALEKLLTERT- 140 (373)
T ss_pred HHHHHHhhhc--------CCCCCEEEECcchhHHHHHHHHHHHhhcCc---EEEEeecCC--CCCcCHHHHHHHhcCCc-
Confidence 8777665431 01445688899999885 345567788 999999874 57899999999997643
Q ss_pred cCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcc
Q 010125 247 VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDC 326 (517)
Q Consensus 247 ~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 326 (517)
.+|++++++|++|.++|+++|+++|++||+|+|+|++|+.+....+ ... .++|++++++|||++. .++
T Consensus 141 -----~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~~~-~g~ 208 (373)
T cd06453 141 -----KLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVD-VQD-----LGCDFLAFSGHKMLGP-TGI 208 (373)
T ss_pred -----eEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeee-ccc-----cCCCEEEeccccccCC-CCc
Confidence 3788999999999999999999999999999999999976654332 111 1689999999999987 788
Q ss_pred eEEEEeCchhHHhhhcCCccccCCcccccc-----ccccCCCccccC-CCC-CCchHHHHHHHHhcHHHHHHHHHHHHHH
Q 010125 327 CCLWVKDPRALVSSLSTNPEYLKNKATESM-----QVVDYKDWQITL-SRR-FRSLKLWFVIRNYGVANLRHFLRSHVNM 399 (517)
Q Consensus 327 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~-----~~~~~~~~~~~~-sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~ 399 (517)
|++++++.. . +.+. .+..+...... ..+......+.. +.. ...+++|.+++.+..++++++.++..++
T Consensus 209 g~~~~~~~~-~-~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~ 283 (373)
T cd06453 209 GVLYGKEEL-L-EEMP---PYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHEL 283 (373)
T ss_pred EEEEEchHH-h-hcCC---CeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 988886542 2 2221 11111000000 000000011111 111 2346788889888888999999999999
Q ss_pred HHHHHHHHhcCCCeEEecCC--CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-
Q 010125 400 AKLFERLVSGDKRFEIVFPC--HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAV- 476 (517)
Q Consensus 400 a~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~- 476 (517)
++++.+.|+++++++++.++ ..++++|.+... ...++.++|.++|+.+.++..
T Consensus 284 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~i~~~l~~~gi~i~~g~~~ 339 (373)
T cd06453 284 TAYALERLSEIPGVRVYGDAEDRAGVVSFNLEGI------------------------HPHDVATILDQYGIAVRAGHHC 339 (373)
T ss_pred HHHHHHHHhcCCCeEEeCCccccCCeEEEEECCc------------------------CHHHHHHHHHHCCEEeccCccc
Confidence 99999999999999987432 456788876432 124667777777865422211
Q ss_pred -------ECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 477 -------LGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 477 -------~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.....++|+++ ++.++++|+|++++.|
T Consensus 340 ~~~~~~~~~~~~~iRis~-~~~~t~~di~~~~~~l 373 (373)
T cd06453 340 AQPLMRRLGVPGTVRASF-GLYNTEEEIDALVEAL 373 (373)
T ss_pred hhHHHHHhCCCCeEEEEe-cCCCCHHHHHHHHhhC
Confidence 11245899998 4678889999998764
No 25
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=2.9e-28 Score=253.13 Aligned_cols=355 Identities=15% Similarity=0.123 Sum_probs=239.2
Q ss_pred ccceeCCCCCChHHHHHHHHHhcc-----cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHH
Q 010125 95 NYFAYFPSSGSIAGFLGEMLSSGF-----NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 169 (517)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 169 (517)
.||++-..++.+.. +.+.+...+ |++...+..++.....-.++++.+++++|.++. ..+++|+|+|++
T Consensus 20 ~yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~------~~v~~~~g~t~~ 92 (403)
T TIGR01979 20 VYLDSAATSQKPQQ-VIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD------EEIVFTRGTTES 92 (403)
T ss_pred EEEeCccccCCCHH-HHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC------CeEEEeCCHHHH
Confidence 47777765554443 445554443 222222333344555566888999999999732 168999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH----HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhH
Q 010125 170 ILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL----QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDV 245 (517)
Q Consensus 170 ~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~----~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~ 245 (517)
+..++.+...... .+++.|++++..|.|. .++++..|+ +++.+|+++ ++.+|+++|++++.+++
T Consensus 93 l~~~~~~~~~~~~-------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~~ 160 (403)
T TIGR01979 93 INLVAYSWGDSNL-------KAGDEIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDD--DGTLDLDDLEKLLTEKT 160 (403)
T ss_pred HHHHHHHhhhhcC-------CCCCEEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCC--CCCCCHHHHHHHhccCC
Confidence 7766654422110 1566799999999874 356677898 999999874 57899999999997644
Q ss_pred hcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc
Q 010125 246 EVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD 325 (517)
Q Consensus 246 ~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~ 325 (517)
.+|+++++++++|.+.|+++|+++|++||+++|||+||+.+....+ ... .++|++++++||++ +|.|
T Consensus 161 ------~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~-~~~-----~~~d~~~~s~~K~~-gp~G 227 (403)
T TIGR01979 161 ------KLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVD-VQA-----LDCDFYVFSGHKMY-GPTG 227 (403)
T ss_pred ------eEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccC-ccc-----cCCCEEEEeccccc-CCCC
Confidence 4888999999999999999999999999999999999987654332 111 16899999999976 5889
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCcccc-c--c--ccccCCCccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 010125 326 CCCLWVKDPRALVSSLSTNPEYLKNKATE-S--M--QVVDYKDWQITLSRR-F-RSLKLWFVIRNYGVANLRHFLRSHVN 398 (517)
Q Consensus 326 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~~-~--~--~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~i~~~~~ 398 (517)
+|++++++. .. +.+ .++..+.... . . ..+....+.++.+.. . ..++++.+++.+...|++++.++..+
T Consensus 228 ~g~l~~~~~-~~-~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 228 IGVLYGKEE-LL-EQM---PPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred ceEEEEchH-HH-hcC---CCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999998754 22 222 1121111000 0 0 000000111222221 1 23566777777766678888999999
Q ss_pred HHHHHHHHHhcCCCeEEecCC----CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEee
Q 010125 399 MAKLFERLVSGDKRFEIVFPC----HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTH 474 (517)
Q Consensus 399 ~a~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 474 (517)
+++++.+.|+++++++++.++ ..++++|.+.+.. ..++.+.|.+.|+...++
T Consensus 303 l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~------------------------~~~~~~~L~~~gI~v~~g 358 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH------------------------PHDVGTILDEEGIAVRSG 358 (403)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC------------------------HHHHHHHHhhCCEEEcch
Confidence 999999999999999998643 3678999875321 234566677777643221
Q ss_pred e--------eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 475 A--------VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 475 ~--------~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
. .+....++|+|+ ++.++++|+++++++|+++.+.+
T Consensus 359 ~~~~~~~~~~~~~~~~iRiS~-~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 359 HHCAQPLMRRFGVPATCRASF-YIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred hhhhHHHHHHhCCCCEEEEEe-ccCCCHHHHHHHHHHHHHHHHHh
Confidence 1 111135899998 57788999999999998876654
No 26
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=3e-28 Score=250.65 Aligned_cols=347 Identities=12% Similarity=0.120 Sum_probs=235.3
Q ss_pred cceeCCCCCChHHHHHHHHHhccccc-----ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGFNIV-----GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 170 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~n~~-----~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 170 (517)
||++...+..+|..+.+.+...+..+ ...|...........++++++++++|.++.. .+++|+|+|+++
T Consensus 2 yld~a~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~------~v~~~~g~t~al 75 (376)
T TIGR01977 2 YFDNAATTYPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSSA------HVVFTNNATTAL 75 (376)
T ss_pred CccCcccCCCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCCC------eEEEeCCHHHHH
Confidence 45554433234444555554444322 1123222233456677889999999986532 689999999998
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHh
Q 010125 171 LCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK----AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVE 246 (517)
Q Consensus 171 ~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k----aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~ 246 (517)
..++.+..+ ++..|+++..+|.++.. .++..|+ +++.++++. ++.+|+++|+++++++
T Consensus 76 ~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~-- 137 (376)
T TIGR01977 76 NIALKGLLK-----------EGDHVITTPMEHNSVARPLECLKEQIGV---EITIVKCDN--EGLISPERIKRAIKTN-- 137 (376)
T ss_pred HHHHHhccC-----------CCCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCC--CCCcCHHHHHHhcCCC--
Confidence 776654211 45678888889988653 4556688 999999874 4689999999998653
Q ss_pred cCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcc
Q 010125 247 VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDC 326 (517)
Q Consensus 247 ~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 326 (517)
+.+|++++++|++|.+.|+++|.++|++||+++|||+|++.+....+-. -.++|++++++|||+++|.|+
T Consensus 138 ----~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~------~~~~D~~~~s~~K~l~~p~g~ 207 (376)
T TIGR01977 138 ----TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMT------ELAIDMLAFTGHKGLLGPQGT 207 (376)
T ss_pred ----CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCch------hcCCCEEEecccccccCCCCc
Confidence 3478899999999999999999999999999999999998877654321 127999999999999999999
Q ss_pred eEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCC-CC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHH
Q 010125 327 CCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLS-RR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFE 404 (517)
Q Consensus 327 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s-r~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~ 404 (517)
|++++++...+.........+ ...... ........++.+ .. ....+++.+++.+...|++.+.++..++++++.
T Consensus 208 g~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~ 283 (376)
T TIGR01977 208 GGLYIREGIKLKPLKSGGTGS-HSALID---QPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLL 283 (376)
T ss_pred eEEEEcCCcCcCceecCCCcc-cccccc---ccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHH
Confidence 999998775321111100000 000000 000000011111 11 122567778888888899999999999999999
Q ss_pred HHHhcCCCeEEecCC----CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeE--
Q 010125 405 RLVSGDKRFEIVFPC----HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINAS-GKAYMTHAVL-- 477 (517)
Q Consensus 405 ~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~-- 477 (517)
+.|.+.++++++.+. ..++++|...... ..++.+.|.+. |+. +....+
T Consensus 284 ~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~~------------------------~~~~~~~L~~~~gi~-v~~g~~~~ 338 (376)
T TIGR01977 284 NGLREINKVKIYGPADPANRVGVVSFTVEGID------------------------SEEVADILDEKFDIA-TRTGLHCA 338 (376)
T ss_pred HHHhcCCCeEEeCCCCccccCCeEEEEECCCC------------------------HHHHHHHHhccCCEE-EEcccccc
Confidence 999999999987542 3578888874321 24567777766 643 332211
Q ss_pred ---------CCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 478 ---------GGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 478 ---------~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
....++|+++ +..++++||++++++|++
T Consensus 339 ~~~~~~~g~~~~~~iRis~-~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 339 PLAHKTIGTFATGTIRLSL-GYFNTEEEIEKLLEALSE 375 (376)
T ss_pred hHHHHHhCCCCCCeEEEec-CCCCCHHHHHHHHHHHhh
Confidence 1235899997 578888999999999875
No 27
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=5e-28 Score=251.40 Aligned_cols=352 Identities=16% Similarity=0.118 Sum_probs=241.4
Q ss_pred ccceeCCCCCChHHHHHHHHHhcc-----cccccccccChhhHHHHHHHHHHHHHHcCCC-cccccCCCCceEEcCCchH
Q 010125 95 NYFAYFPSSGSIAGFLGEMLSSGF-----NIVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCE 168 (517)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~ 168 (517)
.||++...++.+..++ +.+...+ |.....+..++.......++++.+++++|.+ ++ ..+||+|+|+
T Consensus 25 iYld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-------~v~~t~g~t~ 96 (406)
T PRK09295 25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAE-------ELVFVRGTTE 96 (406)
T ss_pred EEEeCcccccCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCC-------eEEEeCCHHH
Confidence 6888887766655554 4443333 3222334445556676778899999999984 33 6899999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH----HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHh
Q 010125 169 AILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL----QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSD 244 (517)
Q Consensus 169 a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~----~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~ 244 (517)
++..++........ .+++.|++++..|.+. ...++..|+ +++.+|++. ++.+|+++|+++++++
T Consensus 97 ~l~~~~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~ 164 (406)
T PRK09295 97 GINLVANSWGNSNV-------RAGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNP--DGTLQLETLPALFDER 164 (406)
T ss_pred HHHHHHHHhhhhcC-------CCcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCC--CCCCCHHHHHHhcCCC
Confidence 98766654321111 1556788999998764 456677899 999999875 4689999999998765
Q ss_pred HhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC
Q 010125 245 VEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL 324 (517)
Q Consensus 245 ~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~ 324 (517)
+ .+|++++++|++|.+.|+++|+++|+++|++++||++|+.+....+ ... .++|++++++||++ +|.
T Consensus 165 t------~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~-~~~-----~~~D~~~~s~~K~~-gp~ 231 (406)
T PRK09295 165 T------RLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVD-VQA-----LDCDFYVFSGHKLY-GPT 231 (406)
T ss_pred c------EEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccC-chh-----cCCCEEEeehhhcc-CCC
Confidence 4 3899999999999999999999999999999999999987765432 111 26899999999954 588
Q ss_pred cceEEEEeCchhHHhhhcCCccccCCccc-cc---cccccC--CCccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHH
Q 010125 325 DCCCLWVKDPRALVSSLSTNPEYLKNKAT-ES---MQVVDY--KDWQITLSRR-F-RSLKLWFVIRNYGVANLRHFLRSH 396 (517)
Q Consensus 325 ~~g~l~~~~~~~~~~~~~~~~~yl~~~~~-~~---~~~~~~--~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~i~~~ 396 (517)
|+|+++++++. +. .+ +++..+... .. .....+ ....++.+.+ . ..+++..+++.+...|++++.++.
T Consensus 232 G~G~l~~~~~~-~~-~~---~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~ 306 (406)
T PRK09295 232 GIGILYVKEAL-LQ-EM---PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYE 306 (406)
T ss_pred CcEEEEEchHh-Hh-hC---CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 99999997652 21 11 222222110 00 000000 0111222222 1 235777788777666888888999
Q ss_pred HHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeee
Q 010125 397 VNMAKLFERLVSGDKRFEIVFP-CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHA 475 (517)
Q Consensus 397 ~~~a~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 475 (517)
..+++++.+.|+++++++++.+ ...++++|.+.... ...+.+.|.+.|+..-++.
T Consensus 307 ~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~------------------------~~~~~~~L~~~gI~v~~g~ 362 (406)
T PRK09295 307 QNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH------------------------AYDVGSFLDNYGIAVRTGH 362 (406)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcC------------------------HHHHHHHHHhCCeEEeccc
Confidence 9999999999999999998864 34678999875321 2345556666675432221
Q ss_pred --------eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 476 --------VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 476 --------~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
.+....++|+|+ +++++++|||+++++|+++..
T Consensus 363 ~c~~~~~~~~~~~~~iRiS~-~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 363 HCAMPLMAYYNVPAMCRASL-AMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred cchHHHHHHHCCCCEEEEEc-cCCCCHHHHHHHHHHHHHHHH
Confidence 011124799998 688899999999999988754
No 28
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=6.6e-28 Score=250.23 Aligned_cols=355 Identities=14% Similarity=0.083 Sum_probs=244.3
Q ss_pred CccceeCCCCCChHHHHHHHHHhcccc-----cccccccChhhHHHHHHHHHHHHHHcCC-CcccccCCCCceEEcCCch
Q 010125 94 PNYFAYFPSSGSIAGFLGEMLSSGFNI-----VGFNWISSPAATELENIVMDWLGQMLKL-PKSFLFSGNGGGVIQGTTC 167 (517)
Q Consensus 94 p~~~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~sp~~~~lE~~v~~~l~~l~g~-~~~~~~~~~~~g~~t~ggt 167 (517)
..||++...++.+..+ .+.+...+.. ....+..+....+...++++.+++++|. +++ .+++++|+|
T Consensus 20 ~~yld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-------~i~~~~~~t 91 (401)
T PRK10874 20 GVYLDSAATALKPQAV-IEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK-------NIVWTRGTT 91 (401)
T ss_pred eEEEeCCcccCCCHHH-HHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC-------EEEEECCHH
Confidence 3588888766655544 4444444421 1122333445566677889999999999 443 689999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 010125 168 EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA----LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINS 243 (517)
Q Consensus 168 ~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s----~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~ 243 (517)
+++..++.+.... .. .+++.|++++..|+| +.+.++..|+ +++.||++. ++.+|+++|++++++
T Consensus 92 ~~i~~~~~~~~~~-----~~--~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~ 159 (401)
T PRK10874 92 ESINLVAQSYARP-----RL--QPGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGA--DRLPDVDLLPELITP 159 (401)
T ss_pred HHHHHHHHHhhhc-----cC--CCcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCC--CCcCCHHHHHHhcCc
Confidence 9987766554211 00 155679999999976 4556788899 999999874 578999999999976
Q ss_pred hHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC
Q 010125 244 DVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT 323 (517)
Q Consensus 244 ~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p 323 (517)
+++ +|++++++++||.+.|+++|+++|+++|++++||++|+.+....+ .. .+ ++|.+++++||++ +|
T Consensus 160 ~t~------lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~-~~----~~-~~d~~~~s~~K~~-gp 226 (401)
T PRK10874 160 RTR------ILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPAD-VQ----AL-DIDFYAFSGHKLY-GP 226 (401)
T ss_pred CcE------EEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCC-ch----hc-CCCEEEEeccccc-CC
Confidence 543 788999999999999999999999999999999999976654432 11 12 5899999999955 68
Q ss_pred CcceEEEEeCchhHHhhhcCCccccCCccc-cccc--cccC--CCccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHH
Q 010125 324 LDCCCLWVKDPRALVSSLSTNPEYLKNKAT-ESMQ--VVDY--KDWQITLSRR--FRSLKLWFVIRNYGVANLRHFLRSH 396 (517)
Q Consensus 324 ~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~-~~~~--~~~~--~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~i~~~ 396 (517)
.|+|+++++++. +. .+ .++...... .... .+.+ ..+.++.+.. ...+++..+++.+...|+.++.++.
T Consensus 227 ~G~G~l~~~~~~-~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~ 301 (401)
T PRK10874 227 TGIGVLYGKSEL-LE-AM---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWS 301 (401)
T ss_pred CccEEEEEchHH-Hh-cC---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 899999987542 22 22 122211100 0000 0000 1112222211 1335677777777677778888888
Q ss_pred HHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeee
Q 010125 397 VNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAV 476 (517)
Q Consensus 397 ~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 476 (517)
.++++++.+.|+++|+++++.++..++++|.+.... ..++.+.|.++|+++.++..
T Consensus 302 ~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~~------------------------~~~~~~~L~~~gI~v~~g~~ 357 (401)
T PRK10874 302 RSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGVH------------------------HSDLVTLLAEYGIALRAGQH 357 (401)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCcC------------------------HHHHHHHHHHCCcEEecccc
Confidence 999999999999999999887777788898864321 24566677777876544332
Q ss_pred E--------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 477 L--------GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 477 ~--------~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
. ....++|+|+. +.++++||++++++|++++.++
T Consensus 358 ~~~~~~~~~g~~~~iRiS~~-~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 358 CAQPLLAALGVTGTLRASFA-PYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred chHHHHHHhCCCCEEEEEec-ccCCHHHHHHHHHHHHHHHHHh
Confidence 1 12468999995 5678889999999999987654
No 29
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=5.5e-28 Score=250.54 Aligned_cols=355 Identities=14% Similarity=0.078 Sum_probs=242.0
Q ss_pred ccceeCCCCCChHHHHHHHHHhcccc---c--ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHH
Q 010125 95 NYFAYFPSSGSIAGFLGEMLSSGFNI---V--GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEA 169 (517)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~--~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a 169 (517)
.||++...++.+. .+.+.+...++. + ...+..++...+...++++.+++++|.++. ..+++|+|+|++
T Consensus 18 iyld~a~~~~~p~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~------~~i~~t~g~t~~ 90 (398)
T TIGR03392 18 VYLDSAATALKPQ-AVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA------ENIVWTRGTTES 90 (398)
T ss_pred EEeeCccccCCCH-HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC------CeEEEeCChHHH
Confidence 5888876665444 455555554421 1 122333444556667889999999998532 168999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhH
Q 010125 170 ILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA----LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDV 245 (517)
Q Consensus 170 ~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s----~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~ 245 (517)
+..++.+.... .. .+++.|++++..|++ +...++..|+ +++.+|++. ++.+|+++|++++++++
T Consensus 91 l~~~~~~~~~~-----~~--~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~--~~~~~~~~l~~~i~~~t 158 (398)
T TIGR03392 91 INLVAQSYARP-----RL--QPGDEIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGA--DLLPDIRQLPELLTPRT 158 (398)
T ss_pred HHHHHHHhhhc-----cC--CCCCEEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCC--CCCcCHHHHHHHhccCc
Confidence 88776654211 00 155678999999977 3456788899 999999975 46899999999997654
Q ss_pred hcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc
Q 010125 246 EVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD 325 (517)
Q Consensus 246 ~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~ 325 (517)
+ +|+++++++++|.+.|+++|+++|++||++++||++|+.+....+ ... . ++|.+++++||++ +|.|
T Consensus 159 ~------lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~~----~-~~d~~~~s~~K~~-gp~G 225 (398)
T TIGR03392 159 R------ILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPD-VQA----L-DIDFYAFSGHKLY-GPTG 225 (398)
T ss_pred e------EEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC-hhh----c-CCCEEEEeccccc-CCCc
Confidence 3 788899999999999999999999999999999999976654332 111 1 6899999999955 5889
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccc-cccccccC----CCccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHH
Q 010125 326 CCCLWVKDPRALVSSLSTNPEYLKNKAT-ESMQVVDY----KDWQITLSRR-F-RSLKLWFVIRNYGVANLRHFLRSHVN 398 (517)
Q Consensus 326 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~-~~~~~~~~----~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~i~~~~~ 398 (517)
+|++++++.. .. .+ .++...... ......++ ..+.++.+.. . ..+++..+++.+...|++++.++..+
T Consensus 226 ~G~l~~~~~~-~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~ 300 (398)
T TIGR03392 226 IGVLYGKTEL-LE-AM---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVS 300 (398)
T ss_pred eEEEEEcHHH-Hh-hC---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 9999876542 22 22 122211100 00000000 0112222222 1 33567777877766778888899999
Q ss_pred HHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-
Q 010125 399 MAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL- 477 (517)
Q Consensus 399 ~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~- 477 (517)
+++++.+.|+++|++++..++...+++|.+.+.. ...+.+.|.++|+...++...
T Consensus 301 l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~~------------------------~~~l~~~L~~~gI~v~~g~~~~ 356 (398)
T TIGR03392 301 LADLAEERLAQLPGFRSFRCPGSSLLAFDFAGVH------------------------HSDLAALLAESGIALRAGQHCA 356 (398)
T ss_pred HHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCcC------------------------HHHHHHHHHhCCEEEecCccch
Confidence 9999999999999999876667788888864321 245666677777644332211
Q ss_pred -------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 478 -------GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 478 -------~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
....++|+|++ +.++++||++++++|+++++++
T Consensus 357 ~~~~~~~g~~~~iRvS~~-~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 357 QPLMAALGVSGTLRASFA-PYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred HHHHHHhCCCCEEEEEee-ccCCHHHHHHHHHHHHHHHHHh
Confidence 11358999994 6788999999999999887653
No 30
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.97 E-value=7.7e-28 Score=247.01 Aligned_cols=301 Identities=15% Similarity=0.142 Sum_probs=212.5
Q ss_pred CCCCCCCCCHHHHHHHHHHhhcCCCCCCC--------CC---------ccceeCCC---CCChHHHHHHHHHhccccccc
Q 010125 64 ESAPNNPESMETILQDVQQHIVPGITHWQ--------SP---------NYFAYFPS---SGSIAGFLGEMLSSGFNIVGF 123 (517)
Q Consensus 64 ~~~p~~~~~~~~il~~~~~~~~~~~~~~~--------~p---------~~~~~~~~---~~~~~~~~~~~l~~~~n~~~~ 123 (517)
..+|++|.+.+.|...|.++-.-...+|. .. |+|++..+ +... . ..+.
T Consensus 28 ~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~rv~~~~~~~~~~~~~hgigr~~~l-----------~-~~q~ 95 (444)
T TIGR03531 28 RKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGEREGRVFSKLVARRHYRFCHGIGRSGDL-----------V-APQP 95 (444)
T ss_pred CcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccceeechhhhhcccceecCCCCcccc-----------c-ccCc
Confidence 46799999988888887775443444443 11 22222222 1111 0 0011
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCch-HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCc
Q 010125 124 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC-EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTH 202 (517)
Q Consensus 124 ~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H 202 (517)
.-..++....+..++..|+++++|.+... .++++++|| +++.+++.+++.. ..++..|+++..+|
T Consensus 96 ka~gss~~~~l~~~~e~~~~~~~G~~~~~------~a~~v~~~Tg~al~laL~alr~~--------~~~gd~VI~p~~th 161 (444)
T TIGR03531 96 KAAGSSLLYKLTNKLVKDFLKLLGLRSIK------SAFVVPLATGMSLSLCLSALRHK--------RPKAKYVIWPRIDQ 161 (444)
T ss_pred cccCccHHHHHHHHHHHHHHHHcCCCCCC------EEEEECCHHHHHHHHHHHHcCCc--------CCCCCEEEEECcCh
Confidence 22345667889999999999999997432 478899999 7888888877532 11234566666889
Q ss_pred hHHHHHHHHcCCCCCCEEEEecC-CCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC
Q 010125 203 CALQKAAQIVGIDVKNFRAIKTT-KSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 281 (517)
Q Consensus 203 ~s~~kaa~~~G~g~~~v~~vp~d-~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi 281 (517)
.|+.|++.++|+ +++.||+. .++++.||+++|+++|++.+. ..+++|+.+.+++..|..||+++|+++|++||+
T Consensus 162 ~S~~kAi~~~G~---~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI 236 (444)
T TIGR03531 162 KSCIKAISTAGF---EPRVIETVLDGDELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDIEEIAKICANYDI 236 (444)
T ss_pred HHHHHHHHHcCC---eEEEeeeeecCcCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCC
Confidence 999999999999 99999952 234699999999999985321 234455555556667789999999999999999
Q ss_pred eEEcccccccccccCccccccc-cCC--CCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 282 WVHVDAAYAGSACICPEFRHFI-DGV--EGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~-~g~--~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
|+|||+|||... +...+.. .++ +++|++++|+||++.+|.++|++++++++... .+.. .|...
T Consensus 237 ~lIvDaAyg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~-~i~~--~y~g~-------- 302 (444)
T TIGR03531 237 PHIVNNAYGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQ-EISK--SYPGR-------- 302 (444)
T ss_pred EEEEECcCcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHH-HHHH--hccCC--------
Confidence 999999998643 2222222 232 35899999999999999999999998887653 2221 12110
Q ss_pred ccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCC
Q 010125 359 VDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK---RFEIVFPC 419 (517)
Q Consensus 359 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~---~~~l~~~~ 419 (517)
.....++.+|+++..+|.+++++++++..++++++.+.|+++. |.+++..|
T Consensus 303 ----------~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~ 356 (444)
T TIGR03531 303 ----------ASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTP 356 (444)
T ss_pred ----------CCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCC
Confidence 0112457899999999999999999999999999999997642 45666433
No 31
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.96 E-value=3.8e-28 Score=251.82 Aligned_cols=347 Identities=13% Similarity=0.115 Sum_probs=229.5
Q ss_pred CccceeCCCCCChHHHHHHHHHhcc-----cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchH
Q 010125 94 PNYFAYFPSSGSIAGFLGEMLSSGF-----NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 168 (517)
Q Consensus 94 p~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 168 (517)
+.||++...++.++.++ +.+...+ |+....+..+.......+++++.+++++|.+++ .++|++|+|+
T Consensus 4 ~~yld~aa~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~ 75 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVA-EKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-------EIVFTSGATE 75 (402)
T ss_pred cEEeeCCcCCCCCHHHH-HHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHH
Confidence 46888887766666654 4333333 211111111223345566788999999998765 6899999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhH
Q 010125 169 AILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI---VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDV 245 (517)
Q Consensus 169 a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~---~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~ 245 (517)
++..++.+...... .++..|+++..+|.++..++.. .|+ +++.||+++ ++.+|+++|++++++++
T Consensus 76 a~~~~l~~l~~~~~-------~~g~~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~~ 143 (402)
T TIGR02006 76 SNNLAIKGIAHFYK-------SKGNHIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKS--NGLIDLEELKAAIRDDT 143 (402)
T ss_pred HHHHHHHHHHHhhc-------CCCCEEEECCCccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCCC
Confidence 99888766543211 1456788999999998876644 477 999999875 56899999999987543
Q ss_pred hcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc
Q 010125 246 EVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD 325 (517)
Q Consensus 246 ~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~ 325 (517)
.+|+++++++++|.+.|+++|+++|++||+|+|||++++.+..+.+- . . .++|++++++||++ +|.|
T Consensus 144 ------~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~-~----~-~~~D~~~~s~~K~~-gp~G 210 (402)
T TIGR02006 144 ------ILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINV-N----E-LKVDLMSISGHKIY-GPKG 210 (402)
T ss_pred ------EEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCc-c----c-cCCCEEEEehhhhc-CCCc
Confidence 38889999999999999999999999999999999999887665431 1 1 27999999999976 5999
Q ss_pred ceEEEEeCchhHHhhhcCCccccCCccccccccccCCCcccc-CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010125 326 CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQIT-LSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLF 403 (517)
Q Consensus 326 ~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~-~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l 403 (517)
+|+++++++.... + .+ .+..... ...++ ++... ..+.+..+++.+ .++++++.++...+++++
T Consensus 211 ~G~l~~~~~~~~~--~--~~-~~~g~~~---------~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l 275 (402)
T TIGR02006 211 IGALYVRRKPRVR--L--EA-LIHGGGH---------ERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRL 275 (402)
T ss_pred eEEEEEccCCCCC--C--Cc-eecCCCc---------cCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 9999998654321 1 11 1111000 00111 11111 123444555544 356788889999999999
Q ss_pred HHHHhcCCCeEEecCC--Ce---eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-
Q 010125 404 ERLVSGDKRFEIVFPC--HF---AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL- 477 (517)
Q Consensus 404 ~~~l~~~~~~~l~~~~--~~---~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~- 477 (517)
.+.|+++++++++.++ .. .+++|...+. +.+...+.+.....|..+ ++...
T Consensus 276 ~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~~----------------------~~~~~~l~~i~v~~G~~c-~~~~~~ 332 (402)
T TIGR02006 276 LNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVEG----------------------ESLIMALKDLAVSSGSAC-TSASLE 332 (402)
T ss_pred HHHHhcCCCEEEeCCccccCCCeEEEEEeCcCH----------------------HHHHHhcCCEEEechhhc-CCCCCC
Confidence 9999999898887432 12 2455553221 122222211111233332 21110
Q ss_pred -------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 478 -------------GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 478 -------------~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
....++|+|+ ++.+|++|||++++.|+++.+++.
T Consensus 333 ~~~~l~~lg~~~~~~~~~vR~S~-~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 333 PSYVLRALGINDELAHSSIRFTI-GRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred ccHHHHHcCCChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0136899999 577999999999999999987753
No 32
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=7.4e-28 Score=246.50 Aligned_cols=288 Identities=11% Similarity=0.076 Sum_probs=203.1
Q ss_pred cceeCCCCCChHHHHHHHHHhcc-----cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGF-----NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 170 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 170 (517)
||++...++.++.++ +.+...+ |+....+..++...++.+++++.+++++|.+++ ..+||+|+|+++
T Consensus 2 Yld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~t~~~t~a~ 73 (364)
T PLN02651 2 YLDMQATTPIDPRVL-DAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-------EIIFTSGATESN 73 (364)
T ss_pred cccCcCCCCCCHHHH-HHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHH
Confidence 667765555555544 3333322 221112223355667777889999999998764 689999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH---HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhc
Q 010125 171 LCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ---IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEV 247 (517)
Q Consensus 171 ~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~---~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~ 247 (517)
+.++..+.....+ +++.|+++...|+++...+. ..|+ +++.+|+++ ++.+|+++|+++|+++++
T Consensus 74 ~~~l~~~~~~~~~-------~g~~vl~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~i~~~t~- 140 (364)
T PLN02651 74 NLAIKGVMHFYKD-------KKKHVITTQTEHKCVLDSCRHLQQEGF---EVTYLPVKS--DGLVDLDELAAAIRPDTA- 140 (364)
T ss_pred HHHHHHHHHhccC-------CCCEEEEcccccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhcCCCcE-
Confidence 9888776543211 45678899999998766554 3477 899999874 578999999999976543
Q ss_pred CCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcce
Q 010125 248 GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCC 327 (517)
Q Consensus 248 g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g 327 (517)
+|++++.++++|.+.|+++|+++||+||+|+|||++++.+....+- .. + ++|++++++||| ++|.|+|
T Consensus 141 -----lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~-~~----~-~~D~~~~s~hK~-~gp~G~g 208 (364)
T PLN02651 141 -----LVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDV-DD----L-GVDLMSISGHKI-YGPKGVG 208 (364)
T ss_pred -----EEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCc-cc----C-CCCEEEechhhh-CCCCceE
Confidence 8899999999999999999999999999999999999988766542 11 1 689999999998 6899999
Q ss_pred EEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010125 328 CLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERL 406 (517)
Q Consensus 328 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~ 406 (517)
+++++++... ...+.+.. .... ..+. .++... ..+.+..+++.+-. +.+++.++..++++++.+.
T Consensus 209 ~l~v~~~~~~----~l~p~~~g-~~~~-------~~~~-~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~ 274 (364)
T PLN02651 209 ALYVRRRPRV----RLEPLMSG-GGQE-------RGRR-SGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNG 274 (364)
T ss_pred EEEEcCCCCC----CCCccccC-CCcc-------CCcc-CCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHH
Confidence 9999876321 11122111 1100 0001 122222 23466667776643 4578889999999999999
Q ss_pred Hhc-CCCeEEecC--CC---eeEEEEEecC
Q 010125 407 VSG-DKRFEIVFP--CH---FAVVCFRVSP 430 (517)
Q Consensus 407 l~~-~~~~~l~~~--~~---~~~v~f~~~~ 430 (517)
|++ +|+++++.+ +. .++++|.+.+
T Consensus 275 l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~ 304 (364)
T PLN02651 275 LRAKLGGVRVNGPRDPEKRYPGTLNLSFAY 304 (364)
T ss_pred HHhhCCCEEEECCCCcccCcCCEEEEEeCC
Confidence 985 689999874 22 3588888854
No 33
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=1.1e-26 Score=242.80 Aligned_cols=359 Identities=18% Similarity=0.117 Sum_probs=239.4
Q ss_pred CccceeCCCCCChHHHHHHHHHhcccc---cc--cccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchH
Q 010125 94 PNYFAYFPSSGSIAGFLGEMLSSGFNI---VG--FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 168 (517)
Q Consensus 94 p~~~~~~~~~~~~~~~~~~~l~~~~n~---~~--~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 168 (517)
..||++-..++ +|..+.+.+...+.. +. ..+..+........++++.+++++|.++.. .+++|+|+|+
T Consensus 33 ~iyLd~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~------~v~~t~g~t~ 105 (424)
T PLN02855 33 LVYLDNAATSQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTSR------EIVFTRNATE 105 (424)
T ss_pred eEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCCC------EEEEeCCHHH
Confidence 46888865554 444455555544321 21 111222334445567889999999985421 6899999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH----HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHh
Q 010125 169 AILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL----QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSD 244 (517)
Q Consensus 169 a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~----~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~ 244 (517)
++..++.......+ .+++.|+++...|.|. ...++..|+ +++.+|++. ++.+|+++|+++|+++
T Consensus 106 al~~i~~~~~~~~~-------~~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~--~~~~~~~~l~~~i~~~ 173 (424)
T PLN02855 106 AINLVAYTWGLANL-------KPGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTP--DEVLDVEQLKELLSEK 173 (424)
T ss_pred HHHHHHHHhhhhcC-------CCcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCC--CCCcCHHHHHHHhccC
Confidence 98766543210000 1456788998988764 445677798 999999875 3479999999999764
Q ss_pred HhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC
Q 010125 245 VEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL 324 (517)
Q Consensus 245 ~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~ 324 (517)
+ .+|+++++++++|.+.|+++|+++|++||++++||++|+.+....+ ... .++|++++++||+ ++|.
T Consensus 174 t------~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-~~~-----~~~d~~~~s~~K~-~gp~ 240 (424)
T PLN02855 174 T------KLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-VQT-----LGADFLVASSHKM-CGPT 240 (424)
T ss_pred c------eEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-chh-----cCCCEEEeecccc-cCCC
Confidence 4 3889999999999999999999999999999999999976654332 111 1589999999995 5688
Q ss_pred cceEEEEeCchhHHhhhcCCccccCCcccccc---ccccCC--CccccCC-CC-CCchHHHHHHHHhcHHHHHHHHHHHH
Q 010125 325 DCCCLWVKDPRALVSSLSTNPEYLKNKATESM---QVVDYK--DWQITLS-RR-FRSLKLWFVIRNYGVANLRHFLRSHV 397 (517)
Q Consensus 325 ~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~---~~~~~~--~~~~~~s-r~-~~al~~~~~l~~~g~~g~~~~i~~~~ 397 (517)
|+|++++++.. +. .+ .+++.+...... ....+. ...++.+ .. ...+.++.+++.+...|++++.++..
T Consensus 241 G~G~l~~~~~~-~~-~~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 241 GIGFLWGKSDL-LE-SM---PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV 315 (424)
T ss_pred ccEEEEEchhh-hh-cC---CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99999997542 21 22 222221110000 000000 0011111 11 12246667777776678899999999
Q ss_pred HHHHHHHHHHhcCCCeEEecCC------CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhc-CcE
Q 010125 398 NMAKLFERLVSGDKRFEIVFPC------HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINAS-GKA 470 (517)
Q Consensus 398 ~~a~~l~~~l~~~~~~~l~~~~------~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~ 470 (517)
++++++++.|+++++++++.+. ..++++|.+.... ..++.+.|.++ |+.
T Consensus 316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~------------------------~~~v~~~L~~~~gI~ 371 (424)
T PLN02855 316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH------------------------PTDLSTFLDQQHGVA 371 (424)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC------------------------HHHHHHHhcccCCEE
Confidence 9999999999999999998542 3478899875321 24566667666 654
Q ss_pred EEeeee---------ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhhcC
Q 010125 471 YMTHAV---------LGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQSAFK 516 (517)
Q Consensus 471 ~~~~~~---------~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~~~~ 516 (517)
+.... ..-..++|+|+ +++++++||++++++|+++...+ ++++
T Consensus 372 -v~~g~~c~~~~~~~~g~~~~iRiS~-~~ynt~~di~~l~~~l~~~~~~~-~~~~ 423 (424)
T PLN02855 372 -IRSGHHCAQPLHRYLGVNASARASL-YFYNTKEEVDAFIHALKDTIAFF-SSFK 423 (424)
T ss_pred -EechhhhhHHHHHHhCCCCeEEEEe-ccCCCHHHHHHHHHHHHHHHHHH-Hhhc
Confidence 33211 11135799998 68889999999999999998774 4553
No 34
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=4.2e-27 Score=240.30 Aligned_cols=343 Identities=12% Similarity=0.055 Sum_probs=233.1
Q ss_pred eeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHH
Q 010125 98 AYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAA 177 (517)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a 177 (517)
.|.+++...+..+.+.+...... ..++...++.+++++++++++|.++.. ..++++|||+|+..++.+.
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~~-----~~~~~~~~~~~~~~~~la~~~g~~~~~------~~~~~~~~t~al~~~~~~~ 70 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPMLG-----HRSPEFLALMDEILEGLRYVFQTENGL------TFLLSGSGTGAMEAALSNL 70 (356)
T ss_pred cccCCCcCCCHHHHHHhCCCccC-----CCCHHHHHHHHHHHHHHHHHhcCCCCC------EEEEecCcHHHHHHHHHHh
Confidence 35566666667777766543311 235667777888999999999995432 5788999999988777654
Q ss_pred HHHHHHHhcccCCCCeEEEeCCCCchH--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-hHhcCCcceEE
Q 010125 178 RDRVLNKIGRENISKLIVYGSDQTHCA--LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINS-DVEVGLIPLFL 254 (517)
Q Consensus 178 r~~~~~~~g~~~~~~~~v~~s~~~H~s--~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~-~~~~g~~p~~v 254 (517)
.. ++..|+++...|++ +...++..|+ +++.+|+++ ++.+|+++|++++++ ++ .+|
T Consensus 71 ~~-----------~g~~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~i~~~~~------~~v 128 (356)
T cd06451 71 LE-----------PGDKVLVGVNGVFGDRWADMAERYGA---DVDVVEKPW--GEAVSPEEIAEALEQHDI------KAV 128 (356)
T ss_pred CC-----------CCCEEEEecCCchhHHHHHHHHHhCC---CeEEeecCC--CCCCCHHHHHHHHhccCC------CEE
Confidence 21 44567777788887 4567888999 999999875 468999999999975 33 378
Q ss_pred EeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCc
Q 010125 255 CATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDP 334 (517)
Q Consensus 255 v~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~ 334 (517)
+++.++|++|.+.|+++|+++|++||+++++|++|+.+....+- . -.++|.++.++|||++.|.|+|+++++++
T Consensus 129 ~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~-~-----~~~~d~~~~s~~K~l~~p~g~G~l~~~~~ 202 (356)
T cd06451 129 TLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRM-D-----EWGVDVAYTGSQKALGAPPGLGPIAFSER 202 (356)
T ss_pred EEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccc-c-----ccCccEEEecCchhccCCCCcceeEECHH
Confidence 88889999999999999999999999999999998654432211 1 11689999999999999999999999764
Q ss_pred hhHHhhhc--CCccccCCccccccccccCCCcc-cc-CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010125 335 RALVSSLS--TNPEYLKNKATESMQVVDYKDWQ-IT-LSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG 409 (517)
Q Consensus 335 ~~~~~~~~--~~~~yl~~~~~~~~~~~~~~~~~-~~-~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~ 409 (517)
. ...... ....+...... ...+.... .. ++-.. ...++.++++.+...+++++.++..++++++.+.|.+
T Consensus 203 ~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 277 (356)
T cd06451 203 A-LERIKKKTKPKGFYFDLLL----LLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEA 277 (356)
T ss_pred H-HHHHHhcCCCCceeecHHH----HHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3 222211 11111110000 00000000 01 11111 1245667777777788999999999999999999998
Q ss_pred CCCeEEecCC--CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEE
Q 010125 410 DKRFEIVFPC--HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINAS-GKAYMTHAVLGGIYAIRFA 486 (517)
Q Consensus 410 ~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~ 486 (517)
. +++++.++ ..+.++|...+.. ....++.++|.++ |+...++.......++|++
T Consensus 278 ~-g~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis 334 (356)
T cd06451 278 L-GLKLLAKPELRSPTVTAVLVPEG----------------------VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIG 334 (356)
T ss_pred c-CCeeccCcccCCCceEEEECCCC----------------------CCHHHHHHHHHHhCCEEEecccccccCCEEEEe
Confidence 7 88886533 2444433222321 0134667777777 7654333222223589999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHH
Q 010125 487 TGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 487 ~~~~~t~~~di~~l~~~l~~~~ 508 (517)
++ +.++++||++++++|+++.
T Consensus 335 ~~-~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 335 HM-GEATREDVLGVLSALEEAL 355 (356)
T ss_pred cC-CCCCHHHHHHHHHHHHHHh
Confidence 85 5688889999999998764
No 35
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=3.9e-26 Score=235.41 Aligned_cols=344 Identities=13% Similarity=0.136 Sum_probs=226.3
Q ss_pred cceeCCCCCChHHHHHHHHHhcc-----cccccccccChhhHHHHHHHHHHHHHHcCC-CcccccCCCCceEEcCCchHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGF-----NIVGFNWISSPAATELENIVMDWLGQMLKL-PKSFLFSGNGGGVIQGTTCEA 169 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~-~~~~~~~~~~~g~~t~ggt~a 169 (517)
||++..+++.++. +.+.+..++ |+........+....+++...++ .+.+|. +++ ..++|+|+|++
T Consensus 2 yld~aa~~~~~~~-v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~~~~-------~i~~t~g~tea 72 (382)
T TIGR03403 2 YLDNNATTMLDPK-VKELMDPFFCDIYGNPNSLHQFGTATHPAIAEALDKL-YKGINARDLD-------DIIITSCATES 72 (382)
T ss_pred cccCcCCCCCCHH-HHHHHHHHHHhcCcCCccccHHHHHHHHHHHHHHHHH-HHHcCcCCCC-------eEEEeCCHHHH
Confidence 6777666665554 555544433 33221111123445565554444 445665 333 68999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHh
Q 010125 170 ILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA---QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVE 246 (517)
Q Consensus 170 ~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa---~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~ 246 (517)
+..++.+.....+.+ .++..|+++...|+++..+. +..|+ +++.||+++ ++.+|+++|++++++++
T Consensus 73 l~~~~~~~~~~~~~~-----~~~~~vi~~~~e~ps~~~~~~~~~~~G~---~v~~v~~~~--~g~~d~~~l~~~i~~~t- 141 (382)
T TIGR03403 73 NNWVLKGVYFDEILK-----GGKNHIITTEVEHPAVRATCAFLESLGV---EVTYLPINE--QGTITAEQVREAITEKT- 141 (382)
T ss_pred HHHHHHHHHHhhccc-----CCCCEEEEcCCccHHHHHHHHHHHHCCC---EEEEEecCC--CCCCCHHHHHHhcccCC-
Confidence 988776542110000 13456888889998877664 44677 999999975 46899999999997654
Q ss_pred cCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcc
Q 010125 247 VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDC 326 (517)
Q Consensus 247 ~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 326 (517)
.+|++++++|++|.+.|+++|+++|++||+++|||++++.+....+- .. .++|++++++|||+ +|.|+
T Consensus 142 -----~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~-~~-----~~~D~~~~s~~K~~-gp~G~ 209 (382)
T TIGR03403 142 -----ALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDV-QK-----AGVDFLSFSAHKFH-GPKGV 209 (382)
T ss_pred -----eEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCc-cc-----cCCCEEEEcchhhC-CCCce
Confidence 37888999999999999999999999999999999999876554331 11 27999999999985 58899
Q ss_pred eEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010125 327 CCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRS-LKLWFVIRNYGVANLRHFLRSHVNMAKLFER 405 (517)
Q Consensus 327 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~ 405 (517)
|++++|+...+ .+ .+...... .... .++....+ +.+..+++.. .+.++...++...+++++.+
T Consensus 210 g~l~vr~~~~~------~p-~~~g~~~~----~~~~----~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~ 273 (382)
T TIGR03403 210 GGLYIRKGVEL------TP-LFHGGEHM----GGRR----SGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLED 273 (382)
T ss_pred EEEEECCCCCC------CC-cccCCCCC----CCcc----cCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHH
Confidence 99999875321 11 22111000 0000 11111122 2445555543 34577778889999999999
Q ss_pred HHhcCCCeEEecCC--C-eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeee------
Q 010125 406 LVSGDKRFEIVFPC--H-FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAV------ 476 (517)
Q Consensus 406 ~l~~~~~~~l~~~~--~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------ 476 (517)
.|+++++++++.+. . .+++.|.+.... ...+...|.++|+..-++..
T Consensus 274 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~L~~~gI~v~~g~~c~~~~~ 329 (382)
T TIGR03403 274 ALLELPDVFVVGDREHRVPNTILISIKGVE------------------------GEAMLWDLNKAGIAASTGSACASEDL 329 (382)
T ss_pred HHhcCCCEEEECCCCCCcCCEEEEEeCCCC------------------------HHHHHHhhccCCEEEEchhccCCCCC
Confidence 99999999988643 2 346777765321 23455556666754332110
Q ss_pred --------E--C---CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 477 --------L--G---GIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 477 --------~--~---g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
. . ....+|+|+ ++.++++|||+++++|+++.+++.
T Consensus 330 ~~~~v~~~~g~~~~~~~~~iR~s~-~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 330 EANPVMVAIGADKELAHTAIRLSL-SRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred CcCHHHHHcCCChHHhCeeEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0 125799998 468899999999999999887754
No 36
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=1.9e-26 Score=239.07 Aligned_cols=369 Identities=13% Similarity=0.063 Sum_probs=233.8
Q ss_pred HHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhccccccccccc-----ChhhHHHHHHHHHHHHHHcCCC
Q 010125 75 TILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWIS-----SPAATELENIVMDWLGQMLKLP 149 (517)
Q Consensus 75 ~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~-----sp~~~~lE~~v~~~l~~l~g~~ 149 (517)
+||+++...-.++...-.+-..++-...+..+|.++.+..... . ....|.. ..+..++.+++.+++++++|.+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~ 80 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-E-FYTAYTPYQPEISQGRLQALFELQTMLCELTGMD 80 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence 7888877642222211111134554445566677766655544 1 1122332 5677889999999999999987
Q ss_pred cccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC----CCCCCEEEEecC
Q 010125 150 KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG----IDVKNFRAIKTT 225 (517)
Q Consensus 150 ~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G----~g~~~v~~vp~d 225 (517)
.+ ..+++.+|+.+...++..++.. . .++++|++++..|.+...++..+| + +++.+|++
T Consensus 81 ~~-------~v~~~~~g~~~~~~~~~~~~~~--~------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~---~~~~v~~~ 142 (398)
T cd00613 81 VA-------NASLQDEATAAAEAAGLAAIRA--Y------HKRNKVLVPDSAHPTNPAVARTRGEPLGI---EVVEVPSD 142 (398)
T ss_pred cc-------ceeccCchHHHHHHHHHHHHhc--c------cCCCEEEEcCccCcchHHHHHHhcccCCc---EEEEeccC
Confidence 54 3556665565544555444322 0 036678899999999999988887 7 89999986
Q ss_pred CCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccCh-hHHHHHHHHhCCeEEcccccccccccCcccccccc
Q 010125 226 KSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPL-KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID 304 (517)
Q Consensus 226 ~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl-~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~ 304 (517)
. ++.+|+++|++++.++++ +|+++.++ ++|.+.|+ ++|+++|++||+|+|+|++|+.+.......
T Consensus 143 ~--~~~~d~~~l~~~i~~~t~------~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~----- 208 (398)
T cd00613 143 E--GGTVDLEALKEEVSEEVA------ALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPG----- 208 (398)
T ss_pred C--CCCcCHHHHHHhcCCCeE------EEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChH-----
Confidence 4 458999999999865543 67777776 68999885 999999999999999999987554333211
Q ss_pred CCCCCCeeeeccccccCCCC-----cceEEEEeCchhHHhhhcCCccccCCccccc-cccccCC-----------Ccccc
Q 010125 305 GVEGADSFSLNAHKWFFATL-----DCCCLWVKDPRALVSSLSTNPEYLKNKATES-MQVVDYK-----------DWQIT 367 (517)
Q Consensus 305 g~~~aDsi~~~~hK~l~~p~-----~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~-~~~~~~~-----------~~~~~ 367 (517)
..++|+++.++|||+ .|. ++|++++++. .. +.+.....+........ ....++. ...+.
T Consensus 209 -~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~ 284 (398)
T cd00613 209 -EYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNIC 284 (398)
T ss_pred -HcCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhcccccccccce
Confidence 126999999999999 664 4667877643 22 22211100000000000 0000000 00000
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhcccc
Q 010125 368 LSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLL 447 (517)
Q Consensus 368 ~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 447 (517)
.+....+...|.++..++.++++++.++..++++++.+.|+++++......+...+++|++....
T Consensus 285 ~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~~--------------- 349 (398)
T cd00613 285 TGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLY--------------- 349 (398)
T ss_pred ecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCcc---------------
Confidence 01111224567777778899999999999999999999999886554222344556677664310
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 448 SEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 448 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
+....++.++|.++|+.+ ....+.+...+|+++ +..++++|||++++.|
T Consensus 350 ------~~~~~~~~~~L~~~gi~~-~~~~~~~~~~lRis~-~~~~t~edid~~~~~L 398 (398)
T cd00613 350 ------GIRAEDLAKALIDGGFHA-PTMYLPVDGTLMIEP-TETETKEELDALLEAL 398 (398)
T ss_pred ------hHHHHHHHHhhhhcCccc-cccccCCCCeEEEEc-CCCCCHHHHHHHHHhC
Confidence 112356777777778643 222123456899998 6788999999998764
No 37
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=2e-26 Score=236.60 Aligned_cols=344 Identities=15% Similarity=0.128 Sum_probs=235.1
Q ss_pred cceeCCCCCChHHHHHHHHHhcc-----cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGF-----NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 170 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 170 (517)
||++..+++.+.. +.+.+...+ |+....+..+....++-+++++.+++++|.++.. ..+|++|+|+++
T Consensus 2 Yld~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~~------~v~~~~~~t~a~ 74 (371)
T PF00266_consen 2 YLDNAGTGPMPKS-VLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPDE------EVVFTSNGTEAL 74 (371)
T ss_dssp EEBTSSS-B-BHH-HHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTTE------EEEEESSHHHHH
T ss_pred EeeCCCccCCCHH-HHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCcccc------ccccccccchhh
Confidence 5555544444444 444444332 3322344455666777778999999999998832 689999999988
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHh
Q 010125 171 LCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ----KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVE 246 (517)
Q Consensus 171 ~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~----kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~ 246 (517)
..++...+... + ++..|+++...|+|.. ..++..|+ +++.+|.+. ++.+|+++++++|+++++
T Consensus 75 ~~~~~~l~~~~-~-------~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~i~~~~--~~~~~~~~~~~~l~~~~~ 141 (371)
T PF00266_consen 75 NAVASSLLNPL-K-------PGDEVLVTSNEHPSNRYPWEEIAKRKGA---EVRVIPADP--GGSLDLEDLEEALNPDTR 141 (371)
T ss_dssp HHHHHHHHHHG-T-------TTCEEEEEESSHHHHHHHHHHHHHHTTE---EEEEEEEGT--TSSCSHHHHHHHHHTTES
T ss_pred hhhhhcccccc-c-------cccccccccccccccccccccccccchh---hhccccccc--cchhhhhhhhhhhccccc
Confidence 87777764321 1 5567888889999876 34456688 999999875 458999999999976654
Q ss_pred cCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcc
Q 010125 247 VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDC 326 (517)
Q Consensus 247 ~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 326 (517)
+|++++.+|.+|.+.|+++|+++||++|++++||++++.+....+- ... ++|.+++++|| +++|.|+
T Consensus 142 ------lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~-~~~-----~~D~~~~s~~K-l~gp~G~ 208 (371)
T PF00266_consen 142 ------LVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDL-DEL-----GADFLVFSSHK-LGGPPGL 208 (371)
T ss_dssp ------EEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--T-TTT-----TESEEEEESTS-TTSSSTE
T ss_pred ------eEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccc-ccc-----ccceeeecccc-cCCCCch
Confidence 8999999999999999999999999999999999999988876642 221 79999999999 8889999
Q ss_pred eEEEEeCchhHHhhhcCCcc--ccCCccccccccccCCCccccCCCC-C-CchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010125 327 CCLWVKDPRALVSSLSTNPE--YLKNKATESMQVVDYKDWQITLSRR-F-RSLKLWFVIRNYGVANLRHFLRSHVNMAKL 402 (517)
Q Consensus 327 g~l~~~~~~~~~~~~~~~~~--yl~~~~~~~~~~~~~~~~~~~~sr~-~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~ 402 (517)
|+++++++... +.-..... +...... .........+.++.+.. . ..+.+..+++.+...|++++.++..+++++
T Consensus 209 g~l~v~~~~~~-~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 286 (371)
T PF00266_consen 209 GFLYVRPEAIE-RLRPAKPGGGYLDFPSL-QEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEY 286 (371)
T ss_dssp EEEEEEHHHHH-HHHTSSSSSSTTTHHHH-HHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhheehhhhhh-ccccccccccccccccc-hhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHH
Confidence 99999986432 22111111 1110000 00000011112222211 1 124566677777778999999999999999
Q ss_pred HHHHHhcCCCeEEecC----CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC
Q 010125 403 FERLVSGDKRFEIVFP----CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG 478 (517)
Q Consensus 403 l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 478 (517)
+.+.|+++++++++.+ ...++++|.+.... ...+.+.|.++|+.... ....
T Consensus 287 ~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------------------~~~~~~~L~~~~I~~~~-G~~~ 341 (371)
T PF00266_consen 287 LREALEELPGIEVLGPDDEPRRPSIVSFNLPGSD------------------------ADDVVKYLEERGIAVST-GSAC 341 (371)
T ss_dssp HHHHHHHTTTEEESSSSCGGBGTTEEEEEETTSS------------------------HHHHHHHHHHHTEEEEE-STTT
T ss_pred HHhhhhcCCceeEeeecccccccceEEEeecCCC------------------------HHHHHHHHhhcCEEEec-cCcc
Confidence 9999999999988652 24678999985441 25666777777754433 2111
Q ss_pred ---------CEeEEEEEecCCCCcHHHHHHH
Q 010125 479 ---------GIYAIRFATGATLTEKRHVVVA 500 (517)
Q Consensus 479 ---------g~~~lR~~~~~~~t~~~di~~l 500 (517)
-..++|+|+ ++.+|++|||++
T Consensus 342 ~~~~~~~~~~~~~iRvS~-~~~nt~~dv~~l 371 (371)
T PF00266_consen 342 AGPSLDILGMGGVIRVSL-HYYNTEEDVDRL 371 (371)
T ss_dssp CHHHHHHHHTTTEEEEE--GTTSSHHHHHHH
T ss_pred cHHHHHHhCCCCEEEEec-cCCCCHHHHhhC
Confidence 126899997 678889999986
No 38
>PRK02948 cysteine desulfurase; Provisional
Probab=99.95 E-value=5.2e-26 Score=234.45 Aligned_cols=344 Identities=13% Similarity=0.110 Sum_probs=229.7
Q ss_pred cceeCCCCCChHHHHHHHHHhcc----cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGF----NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL 171 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~ 171 (517)
||++-..++.++.+ .+.+..++ .+....+..+.....+.+++++.+++++|.+++ .+++++|+|+++.
T Consensus 3 yld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~~~g~t~a~~ 74 (381)
T PRK02948 3 YLDYAATTPMSKEA-LQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-------GIYFTSGGTESNY 74 (381)
T ss_pred eccCCCCCCCCHHH-HHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence 66666555555544 33333332 222233444556667778899999999998765 6899999999998
Q ss_pred HHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcC
Q 010125 172 CTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA---QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVG 248 (517)
Q Consensus 172 ~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa---~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g 248 (517)
.++.+..... . .++.+|+++...|+|+..+. +..|+ +++.+|+++ ++.+|+++|++++++++
T Consensus 75 ~~~~~~~~~~-~------~~g~~vv~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~--~~~~d~~~l~~~l~~~~--- 139 (381)
T PRK02948 75 LAIQSLLNAL-P------QNKKHIITTPMEHASIHSYFQSLESQGY---TVTEIPVDK--SGLIRLVDLERAITPDT--- 139 (381)
T ss_pred HHHHHHHHhc-c------CCCCEEEECCcccHHHHHHHHHHHhCCC---EEEEEeeCC--CCCCCHHHHHHhcCCCC---
Confidence 8877664321 0 14567888999999876654 45577 999999874 46899999999986543
Q ss_pred CcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceE
Q 010125 249 LIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC 328 (517)
Q Consensus 249 ~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 328 (517)
.+|++++++|++|.+.|+++|+++|+++|+++|||++++.+....+ ... .++|++++++||+++ |.|+|+
T Consensus 140 ---~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~-~~~-----~~~d~~~~s~~K~~g-p~G~G~ 209 (381)
T PRK02948 140 ---VLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPID-VFE-----MGIDSLSVSAHKIYG-PKGVGA 209 (381)
T ss_pred ---EEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccC-ccc-----CCCCEEEecHHhcCC-CCcEEE
Confidence 4899999999999999999999999999999999998866544332 111 269999999999765 889999
Q ss_pred EEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH
Q 010125 329 LWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLV 407 (517)
Q Consensus 329 l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l 407 (517)
+++++...+. + ....... ...+. .++-. ....++..+++.. .+..+++.++..++++++.+.|
T Consensus 210 l~~~~~~~~~------~-~~~~~~~----~~~~~----~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L 273 (381)
T PRK02948 210 VYINPQVRWK------P-VFPGTTH----EKGFR----PGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQI 273 (381)
T ss_pred EEEcCCCCCC------C-cccCCCC----CCCcC----CCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHH
Confidence 9987652111 0 0000000 00000 01111 1223444455443 3567888899999999999999
Q ss_pred hcCCCeEEecC--C---CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeee----E-
Q 010125 408 SGDKRFEIVFP--C---HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAV----L- 477 (517)
Q Consensus 408 ~~~~~~~l~~~--~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----~- 477 (517)
+++ ++++... + ...++.|...... ..++...|.++|+....+.. +
T Consensus 274 ~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~------------------------~~~~~~~l~~~gI~v~~g~~c~~~~~ 328 (381)
T PRK02948 274 QTL-PLPIEVEGHSTSCLPHIIGVTIKGIE------------------------GQYTMLECNRRGIAISTGSACQVGKQ 328 (381)
T ss_pred hcC-CCCEEEeCCCccCcCCEEEEEeCCCC------------------------HHHHHHhcccCCEEEEchHhcCCCCC
Confidence 987 5544321 1 1235666654321 23445556667765432210 1
Q ss_pred --------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Q 010125 478 --------------GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQSA 514 (517)
Q Consensus 478 --------------~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~~ 514 (517)
....++|+|++ +.++++|++++++.|+++.+++.+-
T Consensus 329 ~p~~~~~~~~~~~~~~~~~lRis~~-~~~t~~di~~l~~~l~~~~~~~~~~ 378 (381)
T PRK02948 329 EPSKTMLAIGKTYEEAKQFVRFSFG-QQTTKDQIDTTIHALETIGNQFYRG 378 (381)
T ss_pred CCCHHHHHcCCChHHhCceEEEEcC-CCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 12468999984 6788899999999999998877653
No 39
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=3e-26 Score=237.83 Aligned_cols=347 Identities=13% Similarity=0.087 Sum_probs=222.5
Q ss_pred ccceeCCCCCChHHHHHHHHHhccc---ccccccc----cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCch
Q 010125 95 NYFAYFPSSGSIAGFLGEMLSSGFN---IVGFNWI----SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC 167 (517)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~n---~~~~~~~----~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt 167 (517)
.||++...++.++.+ .+.+..++. ....... .+-.....-+++.+++++++|.+++ .+++++|||
T Consensus 5 iyld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-------~v~~~~g~t 76 (404)
T PRK14012 5 IYLDYSATTPVDPRV-AEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-------EIVFTSGAT 76 (404)
T ss_pred EEecCcCCCCCCHHH-HHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-------eEEEeCCHH
Confidence 578887666655554 444433332 1111111 1111223445678899999998765 589999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHh
Q 010125 168 EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI---VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSD 244 (517)
Q Consensus 168 ~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~---~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~ 244 (517)
+|+..++.+......+ +++.|+++..+|+++..+++. .|+ +++.+++++ ++.+|+++|+++|+++
T Consensus 77 ~al~~~l~~l~~~~~~-------~gd~Vi~~~~~~~s~~~~~~~~~~~g~---~~~~v~~~~--~g~~d~~~l~~~i~~~ 144 (404)
T PRK14012 77 ESDNLAIKGAAHFYQK-------KGKHIITSKTEHKAVLDTCRQLEREGF---EVTYLDPQS--NGIIDLEKLEAAMRDD 144 (404)
T ss_pred HHHHHHHHHHHHhhcC-------CCCEEEEecCccHHHHHHHHHHHhCCC---EEEEEccCC--CCcCCHHHHHHhcCCC
Confidence 9999888766432111 456788999999998776654 488 999999874 5789999999999765
Q ss_pred HhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC
Q 010125 245 VEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL 324 (517)
Q Consensus 245 ~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~ 324 (517)
+ .+|++++.++++|.+.|+++|.++|++||+++|+|+|++.+....+- .. ..+|++++++||++ +|.
T Consensus 145 t------~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~-~~-----~~~D~~~~s~~K~~-gp~ 211 (404)
T PRK14012 145 T------ILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDL-SK-----LKVDLMSFSAHKIY-GPK 211 (404)
T ss_pred C------EEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCc-cc-----CCCCEEEEehhhcc-CCC
Confidence 4 38899999999999999999999999999999999999877654331 11 16999999999965 578
Q ss_pred cceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCC-CCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHH
Q 010125 325 DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLS-RRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKL 402 (517)
Q Consensus 325 ~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s-r~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~ 402 (517)
|+|+++++++... ...+.+...... ..++.+ ... ..+.+-.++... ..++.++.++...++++
T Consensus 212 g~G~l~~~~~~~~----~~~~~~~g~~~~----------~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~ 276 (404)
T PRK14012 212 GIGALYVRRKPRV----RLEAQMHGGGHE----------RGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDR 276 (404)
T ss_pred ceEEEEEecCCCC----CCCceecCCCcc----------CCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHH
Confidence 9999999876421 111111111000 001111 110 112222344333 34567778899999999
Q ss_pred HHHHHhcCCCeEEecC-----CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeee--
Q 010125 403 FERLVSGDKRFEIVFP-----CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHA-- 475 (517)
Q Consensus 403 l~~~l~~~~~~~l~~~-----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-- 475 (517)
+.+.|++++++.+... +....++|...+. +.+...+.+.....|..|.+..
T Consensus 277 l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~l~~~~i~~g~~~~~~~~~ 334 (404)
T PRK14012 277 LWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVEG----------------------ESLIMALKDLAVSSGSACTSASLE 334 (404)
T ss_pred HHHHHhcCCCEEEeCCccccCCCEEEEEEeCcCH----------------------HHHHHhCCCeEEEchhhhCCCCCC
Confidence 9999999988887643 1222355554321 1222222111111222221110
Q ss_pred -----------eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 476 -----------VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 476 -----------~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
.......+|+++ ++.++++|++++++.|+++.+++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~iRls~-~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 335 PSYVLRALGLNDELAHSSIRFSL-GRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred CCHHHHHcCCChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 001136899998 567899999999999999887763
No 40
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=2.8e-25 Score=229.12 Aligned_cols=316 Identities=15% Similarity=0.108 Sum_probs=215.0
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG 213 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G 213 (517)
...++.+.+++++|.+ ..++++|+|+||..++.+... ++..|+++..+|++...+++..|
T Consensus 64 ~~~~l~~~lA~~~g~~---------~~~~~~g~t~a~~~al~~l~~-----------~gd~Vlv~~~~h~s~~~~~~~~G 123 (387)
T PRK09331 64 PIADFHEDLAEFLGMD---------EARVTHGAREGKFAVMHSLCK-----------KGDYVVLDGLAHYTSYVAAERAG 123 (387)
T ss_pred HHHHHHHHHHHHhCCC---------cEEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcC
Confidence 3445667788888875 357899999999888776532 56678899999999999999999
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHhHh-cCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccc
Q 010125 214 IDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVE-VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 214 ~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~-~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~ 292 (517)
+ +++.+|++.+.++.+|+++|++++++..+ .+..+.+|+++++++++|.+.|+++|+++|++||+++|||+||+.+
T Consensus 124 ~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g 200 (387)
T PRK09331 124 L---NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVG 200 (387)
T ss_pred C---EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccC
Confidence 9 99999983223578999999999976422 2234668999999999999999999999999999999999999887
Q ss_pred cccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-
Q 010125 293 ACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR- 371 (517)
Q Consensus 293 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~- 371 (517)
.+..+.. . .++|.+++++|||+++|.+.|+++++++ ...........|..... . .+.++.+
T Consensus 201 ~~~~~~~-~-----~g~D~~~~s~~K~l~~~~~~G~l~~~~~-~i~~~~~~~~~~~~~~~-------~----~~~~~~~~ 262 (387)
T PRK09331 201 RMPVDGK-K-----LGADFIVGSGHKSMAASAPSGVLATTEE-YADKVFRTSRKFGVKEV-------E----LLGCTLRG 262 (387)
T ss_pred CcCCCHH-H-----cCCCEEEeeCcccccCCCCEEEEEECHH-HHhhcccccCCCcccce-------e----eeceecCc
Confidence 6544321 1 1689999999999999999999888653 22222222222221100 0 0111111
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEecCCCcchhhhhhhhhccccch
Q 010125 372 FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP--CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSE 449 (517)
Q Consensus 372 ~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 449 (517)
..+..+++++..+- +. .++.++..++++++++.|++++|++++.+ ...+++.|...... . .
T Consensus 263 ~~~~~~~aal~~~~-~~-~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~--~-------------~ 325 (387)
T PRK09331 263 APLVTLMASFPHVV-ER-VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFD--E-------------I 325 (387)
T ss_pred hHHHHHHHHHHHHH-HH-HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchh--H-------------H
Confidence 23345555554432 11 24567778899999999999999998842 23455666543110 0 0
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 450 EEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 450 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
.........++.+.|.++|+..+. .....++|+..+. .+++|+++++++|+++.+++.
T Consensus 326 ~~~~~~~~~~~~~~L~~~gI~~~~---~~~~~i~ri~~~g--~t~~di~~l~~aL~~i~~~~~ 383 (387)
T PRK09331 326 AKKHKRRGFFLYEELKKRGIHGIK---PGATKEFKLSTYG--LTWEQVEYVADAFKEIAEKYG 383 (387)
T ss_pred hhhccccchhHHHHHHHcCceEEc---cCCceEEEEEecc--CCHHHHHHHHHHHHHHHHhcC
Confidence 000011234677888888874222 2234567777644 577899999999998877643
No 41
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.95 E-value=2.7e-25 Score=230.81 Aligned_cols=372 Identities=11% Similarity=0.046 Sum_probs=233.0
Q ss_pred HHHHHHHHHHhhcCCCCCC--CCCccceeCCCCCChHHHHHHHHHhcccc----cccccccC-hhhHHHHHHHHHHHHHH
Q 010125 73 METILQDVQQHIVPGITHW--QSPNYFAYFPSSGSIAGFLGEMLSSGFNI----VGFNWISS-PAATELENIVMDWLGQM 145 (517)
Q Consensus 73 ~~~il~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~~~~~~~l~~~~n~----~~~~~~~s-p~~~~lE~~v~~~l~~l 145 (517)
.++.++.+++. +|-.... .+..||++...++. |..+.+++..+++. ....+..+ .....++++..+ + ++
T Consensus 6 ~~~~~~~~r~~-f~~~~~~~~~~~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l 81 (406)
T TIGR01814 6 EADPLRALRDE-FHLPKIGDENAVIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RL 81 (406)
T ss_pred ccChHHHHHHh-cCCCcccCCCCcEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cc
Confidence 34455555554 3321100 23467887666654 66666666554422 11122221 122334444333 4 88
Q ss_pred cCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH----HHHHcCCCCCCE--
Q 010125 146 LKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK----AAQIVGIDVKNF-- 219 (517)
Q Consensus 146 ~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k----aa~~~G~g~~~v-- 219 (517)
+|.+++ ..+|++|+|+++..++...... + .++.+|+++..+|.|... .++..|+ ++
T Consensus 82 ~g~~~~-------~v~~~~~~t~~l~~~~~~~~~~-----~---~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~ 143 (406)
T TIGR01814 82 VGAKED-------EVVVMNTLTINLHLLLASFYKP-----T---PKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEE 143 (406)
T ss_pred cCCCCC-------cEEEeCCchHHHHHHHHHhcCC-----c---CCccEEEecCCCCChHHHHHHHHHHhcCC---Cccc
Confidence 998765 6899999999987766543110 1 123478888899988544 4456687 66
Q ss_pred --EEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCc
Q 010125 220 --RAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICP 297 (517)
Q Consensus 220 --~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~ 297 (517)
+.++.+. ++.+|++++++.++... ..+.+|++++.++.+|.+.|+++|+++|++||++++||++++.+....+
T Consensus 144 ~~~~~~~~~--~g~~~~~~l~~~~~~~~---~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id 218 (406)
T TIGR01814 144 SMVQIEPRE--EETLRLEDILDTIEKNG---DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLD 218 (406)
T ss_pred ceEEeccCC--CCccCHHHHHHHHHhcC---CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccc
Confidence 4566543 46889999999886421 1245899999999999999999999999999999999999999887654
Q ss_pred cccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccc---ccccCCCccccCCC-CC-
Q 010125 298 EFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESM---QVVDYKDWQITLSR-RF- 372 (517)
Q Consensus 298 ~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~---~~~~~~~~~~~~sr-~~- 372 (517)
- .. .++|.+++++|||++.|.| |+++++.+... ........|......... .........++.+. ..
T Consensus 219 ~-~~-----~gvD~~~~s~hK~l~g~pG-~~l~v~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~ 290 (406)
T TIGR01814 219 L-HD-----WGVDFACWCTYKYLNAGPG-AGAFVHEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPIL 290 (406)
T ss_pred c-cc-----CCCCEEEEcCccccCCCCC-eEEEEehhhhh-hcCCCCCcccCCCCccccccccccCCCccceeeCCccHH
Confidence 2 11 1799999999999986768 66776554321 111111122111000000 00000000111111 11
Q ss_pred CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCC----CeeEEEEEecCCCcchhhhhhhhhc
Q 010125 373 RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD----KRFEIVFPC----HFAVVCFRVSPSPVLMDKLKTKYVN 444 (517)
Q Consensus 373 ~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~ 444 (517)
..+.+..+++.+...|++++.++...+++++++.|++. ++++++.+. ..++++|.+. ..
T Consensus 291 ~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~------------ 357 (406)
T TIGR01814 291 SVAALRGSLDIFDQAGMEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP------------ 357 (406)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC------------
Confidence 22345556766666788889999999999999999875 468887642 2457888775 21
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 445 CLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 445 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
...+.+.|.++|++ +. ..+...+|+|+++.+++++||++++++|+++.
T Consensus 358 ------------~~~~~~~L~~~gi~-v~---~~~~~~iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 358 ------------GKAVFQALIKRGVI-GD---KREPSVIRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred ------------HHHHHHHHHHCCEE-Ee---ccCCCeEEEechhccCCHHHHHHHHHHHHHHh
Confidence 24566677777764 32 22335899998667889999999999998753
No 42
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.95 E-value=3.1e-25 Score=229.67 Aligned_cols=351 Identities=12% Similarity=0.035 Sum_probs=237.4
Q ss_pred eeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHH
Q 010125 98 AYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAA 177 (517)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~a 177 (517)
=+.+++...+..+.+.+....... .++...++.+++++++++++|.+... ..+++++||.++..++...
T Consensus 12 l~~pGP~~~~~~V~~a~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~g~~~~~------~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 12 LFVPGPVNIPERVLRAMNRPNEDH-----RSPAFPALTKELLEDVKYIFKTKSGT------PFIFPTTGTGAWESALTNT 80 (401)
T ss_pred eccCCCCCCCHHHHHHhcCCCCCC-----CCHHHHHHHHHHHHHHHHHhCCCCCC------EEEEeCCcHHHHHHHHHhc
Confidence 355777777667666665544221 36778888999999999999997542 5789999998887666543
Q ss_pred HHHHHHHhcccCCCCeEEEeCCCCchHH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEE
Q 010125 178 RDRVLNKIGRENISKLIVYGSDQTHCAL--QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLC 255 (517)
Q Consensus 178 r~~~~~~~g~~~~~~~~v~~s~~~H~s~--~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv 255 (517)
.+ +++.|++++..|++. ...++..|+ +++.++.+.+ ..+|+++|++++++++. ..+.+|+
T Consensus 81 ~~-----------~Gd~Vlv~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~--~~~~~~~l~~~l~~~~~--~~~k~v~ 142 (401)
T PLN02409 81 LS-----------PGDKVVSFRIGQFSLLWIDQMQRLNF---DVDVVESPWG--QGADLDILKSKLRQDTN--HKIKAVC 142 (401)
T ss_pred CC-----------CCCEEEEeCCCchhHHHHHHHHHcCC---ceEEEECCCC--CCCCHHHHHHHHhhCcC--CCccEEE
Confidence 21 556688888889765 467788899 9999998753 35899999999986320 1234888
Q ss_pred eeccCCccccccChhHHHHH--HHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeC
Q 010125 256 ATIGTTAITAVDPLKPLCDV--AKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKD 333 (517)
Q Consensus 256 ~t~gtt~~G~idpl~eI~~i--~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~ 333 (517)
+++.+|+||.+.|+++|+++ |+++|++++||++++.+....+- .. -++|.+++++|||+++|.|+|++++++
T Consensus 143 ~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~-~~-----~~~D~~~~s~~K~l~~P~G~G~l~~~~ 216 (401)
T PLN02409 143 VVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRM-DE-----WGVDVALTGSQKALSLPTGLGIVCASP 216 (401)
T ss_pred EEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccc-cc-----cCccEEEEcCccccCcCCCcceeEECH
Confidence 99999999999999999999 99999999999999766544321 11 178999999999999999999999876
Q ss_pred chhHHhhhcC--CccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC
Q 010125 334 PRALVSSLST--NPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD 410 (517)
Q Consensus 334 ~~~~~~~~~~--~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~ 410 (517)
+. +.+.... .+.|+...... .....+.+. ..+-. ...+.+..+++.+...|++++.+++.++++++++.|++.
T Consensus 217 ~~-~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~-~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~ 292 (401)
T PLN02409 217 KA-LEASKTAKSPRVFFDWADYL--KFYKLGTYW-PYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW 292 (401)
T ss_pred HH-HHHHhcCCCCCeecCHHHHH--HHHhcCCCC-CCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 53 2222111 11222110000 000000000 00111 012355566776677899999999999999999999887
Q ss_pred CCeEEecCC---Ce-eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-CEeEEEE
Q 010125 411 KRFEIVFPC---HF-AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG-GIYAIRF 485 (517)
Q Consensus 411 ~~~~l~~~~---~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~ 485 (517)
+++++.+. .+ .+++|+++.. . ...++.+.+.++..+.+.+.... ...++|+
T Consensus 293 -g~~~~~~~~~~~s~~v~~~~~p~~-~----------------------~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Ri 348 (401)
T PLN02409 293 -GLKLCTKKPEWRSDTVTAVVVPEG-I----------------------DSAEIVKNAWKKYNLSLGLGLNKVAGKVFRI 348 (401)
T ss_pred -CCeeccCChhhcccceEEEeCCCC-C----------------------CHHHHHHHHHHhCCEEEEcCCCcccCCEEEE
Confidence 89887642 23 3455665421 0 12345555544433444443322 3468999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 486 ATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 486 ~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
+.+. +++.+|+.+++++|.++..++.
T Consensus 349 g~~g-~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 349 GHLG-NVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred cCCC-CCCHHHHHHHHHHHHHHHHHcC
Confidence 9987 5688899999999998876543
No 43
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=4.5e-25 Score=228.71 Aligned_cols=340 Identities=14% Similarity=0.112 Sum_probs=225.2
Q ss_pred ccceeCCCCCChHHHHHHHHHhcccc---c-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHH
Q 010125 95 NYFAYFPSSGSIAGFLGEMLSSGFNI---V-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 170 (517)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 170 (517)
.||++...++.++. +.+.+...+.. + ...|..+....++.+++++.+++++|.++. ..++++|+|+++
T Consensus 19 ~yl~~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-------~v~~~~~~t~~l 90 (397)
T TIGR01976 19 VFFDNPAGTQIPQS-VADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-------EVVFGANATSLT 90 (397)
T ss_pred EEecCCccCCCCHH-HHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCHHHHH
Confidence 67877655544444 44444444321 1 123443445566777889999999998754 578899999887
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHh
Q 010125 171 LCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ----KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVE 246 (517)
Q Consensus 171 ~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~----kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~ 246 (517)
..++.+.... ..+++.|++++..|+|.. ..++..|+ +++.++++++ ++.+|+++|+++|++++
T Consensus 91 ~~~~~~~~~~--------~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~i~~~~- 157 (397)
T TIGR01976 91 FLLSRAISRR--------WGPGDEVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEA-TGELHPDDLASLLSPRT- 157 (397)
T ss_pred HHHHHHHHhc--------CCCCCEEEEcCCchHhHHHHHHHHHHhcCC---EEEEEecccc-CCCcCHHHHHHhcCCCc-
Confidence 6544433211 015567888889998754 55677899 9999998753 47899999999997544
Q ss_pred cCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcc
Q 010125 247 VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDC 326 (517)
Q Consensus 247 ~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~ 326 (517)
.+|+++++++++|.+.|+++|+++|++||++++||+||+.+....+ ... .++|.+++++|||++ | ++
T Consensus 158 -----~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~g-~-~~ 224 (397)
T TIGR01976 158 -----RLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-VQA-----TGADFLTCSAYKFFG-P-HM 224 (397)
T ss_pred -----eEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-HHH-----cCCCEEEEechhhcC-C-ce
Confidence 3899999999999999999999999999999999999965543221 111 168999999999986 4 38
Q ss_pred eEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccC-CCCC-CchHHHHHHHHhcHH--------------HHH
Q 010125 327 CCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITL-SRRF-RSLKLWFVIRNYGVA--------------NLR 390 (517)
Q Consensus 327 g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~-sr~~-~al~~~~~l~~~g~~--------------g~~ 390 (517)
|+++++++. ..........|..... ...++. ++.+ ..+.+..+++.+... +++
T Consensus 225 G~l~~~~~~-~~~l~~~~~~~~~~~~----------~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~ 293 (397)
T TIGR01976 225 GILWGRPEL-LMNLPPYKLTFSYDTG----------PERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQ 293 (397)
T ss_pred EEEEEcHHH-HhhCCCccccCccCCC----------cchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHH
Confidence 998886542 2211111111111100 001122 2222 224556666655322 367
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecC----CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHh
Q 010125 391 HFLRSHVNMAKLFERLVSGDKRFEIVFP----CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINA 466 (517)
Q Consensus 391 ~~i~~~~~~a~~l~~~l~~~~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 466 (517)
+..++..++++++++.|+++++++++.+ +..+++.|..... ....+.++|.+
T Consensus 294 ~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~l~~~L~~ 349 (397)
T TIGR01976 294 AIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGL------------------------PPQRVVRRLAD 349 (397)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCc------------------------CHHHHHHHHHH
Confidence 7788888999999999999888998754 2567888776432 12457777777
Q ss_pred cCcEEEeeee----------E-CCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 467 SGKAYMTHAV----------L-GGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 467 ~g~~~~~~~~----------~-~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
+|+..-.... . .+..++|+|++ +.++++|++++++.|
T Consensus 350 ~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~t~~di~~l~~~l 397 (397)
T TIGR01976 350 QGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLA-HYNTAEEVDRLLEAL 397 (397)
T ss_pred CCeEEEeCccchHHHHHHhCCCCCCCeEEEEee-ccCCHHHHHHHHHhC
Confidence 7865433211 1 13458999995 577888999998764
No 44
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.94 E-value=1.2e-25 Score=222.42 Aligned_cols=349 Identities=15% Similarity=0.136 Sum_probs=226.5
Q ss_pred CCCccceeCCCCCChHHHHHHHH---Hhcc-cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCch
Q 010125 92 QSPNYFAYFPSSGSIAGFLGEML---SSGF-NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC 167 (517)
Q Consensus 92 ~~p~~~~~~~~~~~~~~~~~~~l---~~~~-n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt 167 (517)
..|-|+++...++..+.++..++ ..++ |++.. +.....-..+| +.++.+++++|.++. +++||+|+|
T Consensus 42 ~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~-~y~w~~~~~~E-~aR~~VAklInAd~~-------dIiFts~AT 112 (428)
T KOG1549|consen 42 TRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR-SYGWKAEDAVE-AAREQVAKLINADPS-------DIVFTSGAT 112 (428)
T ss_pred CccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc-ccchhhhHHHH-HHHHHHHHHhCCCCC-------cEEEeCCch
Confidence 46778998888888887775543 3333 44332 12222333455 578999999999987 699999999
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHHh
Q 010125 168 EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV---GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSD 244 (517)
Q Consensus 168 ~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~---G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~ 244 (517)
|||.+++...-.. ..+ + .+-.|++.+.+|.|+..+++.+ |+ .|+.+|++. ++..|++.+++.|+.+
T Consensus 113 Es~Nlvl~~v~~~-~~~-~----~~k~iitl~~eH~~v~~s~~~l~~~g~---~Vt~lpv~~--~~~~d~~~~~~~i~~~ 181 (428)
T KOG1549|consen 113 ESNNLVLKGVARF-FGD-K----TKKHIITLQTEHPCVLDSCRALQEEGL---EVTYLPVED--SGLVDISKLREAIRSK 181 (428)
T ss_pred HHHHHHHHHhhcc-ccc-c----ccceEEEecccCcchhHHHHHHHhcCe---EEEEeccCc--cccccHHHHHHhcCCC
Confidence 9998887654221 111 1 1226888889999999888766 77 999999983 5799999999999998
Q ss_pred HhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC
Q 010125 245 VEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL 324 (517)
Q Consensus 245 ~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~ 324 (517)
++ +|.+.+.++.+|.+.|++||+.+|+++|+.+|+|+||+.+....+ .+.+ ++|.++++.|||++.|.
T Consensus 182 T~------lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vD-V~el-----n~D~~s~s~HK~ygp~~ 249 (428)
T KOG1549|consen 182 TR------LVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVD-VQEL-----NADFLSISAHKIYGPPG 249 (428)
T ss_pred ce------EEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCcccc-HHHc-----CchheeeecccccCCCc
Confidence 75 899999999999999999999999999999999999999987765 2333 89999999999998765
Q ss_pred cceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC--CCchHHHHHHHHhc--HHHHHHHHHHHHHHH
Q 010125 325 DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR--FRSLKLWFVIRNYG--VANLRHFLRSHVNMA 400 (517)
Q Consensus 325 ~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~--~~al~~~~~l~~~g--~~g~~~~i~~~~~~a 400 (517)
+|+||+|.... .....+++..+... .+ +..+.. ..++.+-.+.+... ..+...++.+ +.
T Consensus 250 -iGaLYvr~~~~---~~~~~p~~~GGgq~-----r~-----~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~---~~ 312 (428)
T KOG1549|consen 250 -IGALYVRRKRP---RLRVEPPLSGGGQE-----RG-----LRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKR---LS 312 (428)
T ss_pred -ceEEEEccCCC---cccccCcccCCccc-----cc-----cccCCcCchhhhhhHHHHHHHHhhcchhHHHHHH---HH
Confidence 99999986211 12334555443321 11 111111 12233444444432 1223333333 45
Q ss_pred HHHHHHH-hcCCCeEEecC-----CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEee
Q 010125 401 KLFERLV-SGDKRFEIVFP-----CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTH 474 (517)
Q Consensus 401 ~~l~~~l-~~~~~~~l~~~-----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 474 (517)
..+...+ ...+...+... +.+..+.|.+.... .+-..+.+.-...|..+.+.
T Consensus 313 ~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~g~----------------------~~~~~~~~~~l~s~~a~~~~ 370 (428)
T KOG1549|consen 313 EKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVEGE----------------------SLLMDLKDVALSSGSACTSA 370 (428)
T ss_pred HHHHHHHhhhCchhhccCCcccccccceeeecccccCc----------------------chhhhhhhhhhcccchhhcC
Confidence 5555554 33555544432 33444555532210 00111111112223222111
Q ss_pred e-------------eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 475 A-------------VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 475 ~-------------~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
. ....+..+||++. .+|+++|++++++.+.+.+..+.
T Consensus 371 ~~epsy~l~~~G~~~~~~~~~iRis~G-~y~t~~di~~~~~~i~~~v~~~~ 420 (428)
T KOG1549|consen 371 SLEPSYVLRAIGVDEDLAHSSIRISIG-RYTTEEDIDYLVDAIKKLVSLLR 420 (428)
T ss_pred CCCcchhhhhcCcchhhhcceeEEeee-eeCcHHHHHHHHHHHHHHHHhcc
Confidence 1 0123578999995 67888899999999999887654
No 45
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=6.7e-24 Score=217.07 Aligned_cols=310 Identities=15% Similarity=0.116 Sum_probs=207.6
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCC
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
+++.+.+++++|.+ ..++++|+|+++..++.+... ++..|+++..+|++...+++..|+
T Consensus 47 ~~l~~~la~~~g~~---------~i~~~~g~t~al~~~l~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~- 105 (361)
T cd06452 47 KDFHHDLAEFLGMD---------EARVTPGAREGKFAVMHSLCE-----------KGDWVVVDGLAHYTSYVAAERAGL- 105 (361)
T ss_pred HHHHHHHHHHcCCc---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcchHHHHHHHhcCC-
Confidence 34456677888872 578999999998877766432 566788898999999999999999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHhHhc-CCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccc
Q 010125 216 VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEV-GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC 294 (517)
Q Consensus 216 ~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~-g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~ 294 (517)
+++.||++.++++.+|+++|++++++..+. +..+.+|+++++++++|.++|+++|+++|++||+++|+|+||+.+..
T Consensus 106 --~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~ 183 (361)
T cd06452 106 --NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRM 183 (361)
T ss_pred --EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCc
Confidence 999999986445699999999999754322 22456888899999999999999999999999999999999986544
Q ss_pred cCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CC
Q 010125 295 ICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FR 373 (517)
Q Consensus 295 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~ 373 (517)
..+. .. . ++|.++.++||+++.|.++|+++++++ ...+..... .++.... .. .+..+.+ ..
T Consensus 184 ~~~~-~~----~-~~d~~~~s~~K~l~~~~~~G~l~~~~~-~~~~l~~~~-~~~~~~~------~~----~~~~~~~~~~ 245 (361)
T cd06452 184 PVSG-KE----L-GADFIVGSGHKSMAASAPIGVLATTEE-WADIVFRTS-QMFKIKE------VE----LLGCTLRGAP 245 (361)
T ss_pred CCCH-HH----c-CCCEEEecCCccccCCCCeEEEEECHH-HHHHHhccc-cccccce------ee----eeccccCchH
Confidence 3221 11 1 589999999999998889998888643 222221211 1111000 00 0111111 22
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEecCCCcchhhhhhhhhccccchHH
Q 010125 374 SLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF--PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEE 451 (517)
Q Consensus 374 al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (517)
+..++.++..+ .+. .+..++..++++++++.|+++|+++++. +...+++.|+..... . ...
T Consensus 246 ~~~~~~al~~~-~~~-~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~--~-------------~~~ 308 (361)
T cd06452 246 LVTLMASFPHV-KER-VKRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFD--E-------------IAK 308 (361)
T ss_pred HHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcc--h-------------hhh
Confidence 34455555433 222 3455666677899999999999999873 334566777653110 0 000
Q ss_pred HHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 452 QINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 452 ~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
.......++.+.|.++|+.. .. .....++|++++. .+++|++.++++|+++.
T Consensus 309 ~~~~~~~~~~~~L~~~gI~~-~~--~~~~~~~ri~~~g--~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 309 KHKRRGYFLYSELKKRGIHG-IK--PGLTRYFKLSTYG--LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred hccccchhHHHHHHHcCceE-Ec--CCCceEEEEEecC--CCHHHHHHHHHHHHHHh
Confidence 00011135778887788752 11 1223488998743 47789999999998654
No 46
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.94 E-value=2.2e-24 Score=220.81 Aligned_cols=343 Identities=11% Similarity=0.076 Sum_probs=227.7
Q ss_pred eCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHH
Q 010125 99 YFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 178 (517)
Q Consensus 99 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar 178 (517)
+.|++......+.+.+...+. .+ .+....+-+++++.+++++|.+++. ...++|+|||+|+..++....
T Consensus 7 ~~pgp~~~~~~v~~~~~~~~~----~~--~~~~~~~~~~~r~~la~l~~~~~~~-----~~i~~t~~~t~al~~~~~~l~ 75 (363)
T TIGR02326 7 LTPGPLTTSRTVKEAMLFDWC----TW--DSDYNIVVEQIRQQLLALATAEEGY-----TSVLLQGSGTFAVEAVIGSAV 75 (363)
T ss_pred ecCCCCCCCHHHHHHhCCCCC----CC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCCHHHHHHHHHhcC
Confidence 455555555555555444332 22 2455566677899999999997531 157899999999987776543
Q ss_pred HHHHHHhcccCCCCeEEEeCCCCchH-HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEee
Q 010125 179 DRVLNKIGRENISKLIVYGSDQTHCA-LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCAT 257 (517)
Q Consensus 179 ~~~~~~~g~~~~~~~~v~~s~~~H~s-~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t 257 (517)
.. ++.+|+++...|.+ +.+.++..|+ +++.+|+++ ++.+|+++|+++++++++ +.+|.++
T Consensus 76 ~~----------~~~vlv~~~~~~~~~~~~~a~~~g~---~~~~v~~~~--~~~~d~~~l~~~l~~~~~----~~~v~~~ 136 (363)
T TIGR02326 76 PK----------DGKLLVVINGAYGARIVQIAEYLGI---PHHVVDTGE--VEPPDVVEVEAILAADPA----ITHIALV 136 (363)
T ss_pred CC----------CCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCC--CCCCCHHHHHHHHhhCCC----ccEEEEE
Confidence 21 44556666666655 3577888999 999999875 468999999999876432 2367788
Q ss_pred ccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhH
Q 010125 258 IGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRAL 337 (517)
Q Consensus 258 ~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~ 337 (517)
+.+|++|.+.|+++|+++|++||++++||++++.+....+ ... + ++|.++.++|||+++|.|.|+++++++..
T Consensus 137 ~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~-~~~----~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~~- 209 (363)
T TIGR02326 137 HCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPID-IAE----L-HIDYLISSANKCIQGVPGFGFVIARQAEL- 209 (363)
T ss_pred eecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccc-hhh----c-CccEEEecCccccccCCcceEEEECHHHH-
Confidence 8899999999999999999999999999998876554332 111 1 68999999999999999999999976532
Q ss_pred HhhhcCCcc-ccCCccccccccccCCCccccCCCCC-----CchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcC
Q 010125 338 VSSLSTNPE-YLKNKATESMQVVDYKDWQITLSRRF-----RSLKLWFVIRNYGVA-NLRHFLRSHVNMAKLFERLVSGD 410 (517)
Q Consensus 338 ~~~~~~~~~-yl~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~i~~~~~~a~~l~~~l~~~ 410 (517)
........+ |+.... .+....+ ....+++ ..+++..+++.+..+ +++++.+++.++++++++.|++.
T Consensus 210 ~~~~~~~~~~~~~~~~-----~~~~~~~-~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~ 283 (363)
T TIGR02326 210 AACKGNARSLSLDLYD-----QWRCMED-NHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL 283 (363)
T ss_pred HHhhcCCCceeecHHH-----HHHHHhc-cCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc
Confidence 221111111 110000 0000000 0011222 224556667666555 58888899999999999999887
Q ss_pred CCeEEecCC--CeeE-EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEe
Q 010125 411 KRFEIVFPC--HFAV-VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFAT 487 (517)
Q Consensus 411 ~~~~l~~~~--~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~ 487 (517)
+++++.++ .+++ ++|++.+.. ......+.+.|.++|+...++.. .+..++|+++
T Consensus 284 -g~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~v~~~L~~~gi~v~~g~~-~~~~~iRi~~ 340 (363)
T TIGR02326 284 -GFEPLLDDEIQSPIITSFYSPEDP---------------------DYRFADFYQRLKEQGFVIYPGKV-SQVDCFRIGN 340 (363)
T ss_pred -CCeeccCcccCCceEEEEECCCCC---------------------CCCHHHHHHHHHHCCEEEECCcC-CCCCEEEEec
Confidence 78876543 3444 466664320 00124567777777865433322 2346899997
Q ss_pred cCCCCcHHHHHHHHHHHHHHH
Q 010125 488 GATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 488 ~~~~t~~~di~~l~~~l~~~~ 508 (517)
+. +.+.+|+++++++|+++.
T Consensus 341 ~~-~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 341 IG-EVDAADITRLLTAIGKAM 360 (363)
T ss_pred CC-CCCHHHHHHHHHHHHHHh
Confidence 65 457889999999998764
No 47
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.94 E-value=1.8e-24 Score=239.25 Aligned_cols=330 Identities=14% Similarity=0.019 Sum_probs=230.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCch----HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCch
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC----EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHC 203 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt----~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~ 203 (517)
..+..++-.++.+|+++++|++ ..+|++++| +|+++++....+ ..|+. .+.+|+++..+|.
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~~---------~v~f~pnaga~ge~a~~~vi~~~~~----~~Gd~--~r~~vli~~~aH~ 627 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGFD---------SFSLQPNAGAAGEYAGLMVIRAYHL----SRGDH--HRNVCIIPVSAHG 627 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCCC---------eEEEcCCCcHHHHHHHHHHHHHHHh----ccCCC--CCCEEEeCCCcCc
Confidence 3467778889999999999993 579999988 787777766532 11321 4568999999999
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 204 ALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 204 s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
++...+.+.|+ +++.||+|+ +|.+|+++|+++|++.+. ...+|++++++|..|.++|+++|+++||++|+.+
T Consensus 628 sn~a~a~~~G~---~vv~v~~d~--~G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv 699 (993)
T PLN02414 628 TNPASAAMCGM---KIVVVGTDA--KGNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQV 699 (993)
T ss_pred cCHHHHHHCCC---EEEEeccCC--CCCcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCEE
Confidence 99999999999 999999975 579999999999985321 1348999999999999999999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCCCc-----ceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD-----CCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-----~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
+||||+..+......... -++|+++++.||||+.|.| +|++.+++. +... .|..+..... +.
T Consensus 700 ~vDgAq~~a~~~l~~p~~-----~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~p~---lPg~~v~~~~---~~ 766 (993)
T PLN02414 700 YMDGANMNAQVGLTSPGF-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LAPF---LPSHPVVPTG---GI 766 (993)
T ss_pred EEEecCHHhccCcCCccc-----cCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hccc---CCCCccccCC---Cc
Confidence 999999766533222112 2899999999999998876 999988763 2211 2222211100 00
Q ss_pred ccCCCccccCCCCC-------CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEec
Q 010125 359 VDYKDWQITLSRRF-------RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP--CHFAVVCFRVS 429 (517)
Q Consensus 359 ~~~~~~~~~~sr~~-------~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~ 429 (517)
......+-.++++. .++..|..++.+|.+|+++..++...+++|++++|++..++....+ +.+.-+.+.+.
T Consensus 767 ~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~ 846 (993)
T PLN02414 767 PRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLR 846 (993)
T ss_pred ccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEecc
Confidence 00000011233332 2246688888899999999999999999999999987433332222 22233333333
Q ss_pred CCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 430 PSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
+.. ...+ .....+.++|.+.|..... ..+.....+|++.+ ...+++|||+++++|..+.+
T Consensus 847 ~l~-----------~~~g-------~~~~di~krL~d~Gihapt-~~~pv~~~lmiepT-E~~skeelDrf~~al~~i~~ 906 (993)
T PLN02414 847 PFK-----------NTAG-------IEPEDVAKRLMDYGFHAPT-MSWPVPGTLMIEPT-ESESKAELDRFCDALISIRE 906 (993)
T ss_pred ccc-----------cccC-------CCHHHHHHHHHHcCcEEee-eccccCCEEEEEee-eeCCHHHHHHHHHHHHHHHH
Confidence 110 0000 1125577777777864332 22344668999995 56788899999999999988
Q ss_pred HHHh
Q 010125 510 AFQS 513 (517)
Q Consensus 510 ~l~~ 513 (517)
++.+
T Consensus 907 e~~~ 910 (993)
T PLN02414 907 EIAD 910 (993)
T ss_pred HHHH
Confidence 8764
No 48
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.93 E-value=1.8e-23 Score=227.03 Aligned_cols=381 Identities=14% Similarity=0.055 Sum_probs=250.0
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCCCCcccee-----CCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHH
Q 010125 69 NPESMETILQDVQQHIVPGITHWQSPNYFAY-----FPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLG 143 (517)
Q Consensus 69 ~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~ 143 (517)
.+.+.-++++.+.++-..+..-..+..|+|- .+..-..|....++++. .+. ...+.+.+.-++-.+..+|++
T Consensus 477 ~~~SE~el~r~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~--hPy-qp~e~sQG~lq~i~elq~~l~ 553 (954)
T PRK12566 477 AHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL--HPF-APREQAEGYRAMIDELEAWLC 553 (954)
T ss_pred cCCCHHHHHHHHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC--CCC-CchhhhcCHHHHHHHHHHHHH
Confidence 4578999999999876666543344455553 22222223333444443 111 122346666666677789999
Q ss_pred HHcCCCcccccCCCCceEEcC-CchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEE
Q 010125 144 QMLKLPKSFLFSGNGGGVIQG-TTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAI 222 (517)
Q Consensus 144 ~l~g~~~~~~~~~~~~g~~t~-ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~v 222 (517)
+++|++.. .+.. +|+++++.++++.|... ...|.. .+.+|+++...|.+....+...|+ +++.|
T Consensus 554 eLtGmd~~---------Sl~p~sGA~gE~A~Lmair~yh-~~~Ge~--~r~~vLIp~saHgtNpasa~~~Gi---eVv~V 618 (954)
T PRK12566 554 AITGFDAI---------CMQPNSGAQGEYAGLLAIRRYH-RSRGQS--QRDICLIPSSAHGTNPASAQMAGM---RVVIV 618 (954)
T ss_pred HHHCCCeE---------eecCCchHHHHHHHHHHHHHHH-HhcCCC--CCCEEEecccccccCHHHHHHCCC---EEEEe
Confidence 99999853 4444 77888888888876532 222433 567899999999877777888899 99999
Q ss_pred ecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCcccccc
Q 010125 223 KTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF 302 (517)
Q Consensus 223 p~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~ 302 (517)
|+|+ +|.+|+++|+++|++.. ....+|+++.+++..+..+|+++|+++||++|++++||||+..+.........
T Consensus 619 p~D~--~G~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~- 692 (954)
T PRK12566 619 ECDP--DGNVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPAD- 692 (954)
T ss_pred ccCC--CCCcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhh-
Confidence 9985 57999999999997321 12457888999887777788999999999999999999999654443332222
Q ss_pred ccCCCCCCeeeeccccccCCCCcceEEEEeC---chhHHhhhcCCccccCCcc-ccccccccCCCccccCCCC----CC-
Q 010125 303 IDGVEGADSFSLNAHKWFFATLDCCCLWVKD---PRALVSSLSTNPEYLKNKA-TESMQVVDYKDWQITLSRR----FR- 373 (517)
Q Consensus 303 ~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~---~~~~~~~~~~~~~yl~~~~-~~~~~~~~~~~~~~~~sr~----~~- 373 (517)
-++|++++++||||+.|.|.|..+++. ++.+. +|+.... .+..+.. .. +.+.. ..
T Consensus 693 ----~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~-------pfLp~~P~~d~~G~~-~r----~ga~S~~~~gsa 756 (954)
T PRK12566 693 ----IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLA-------PFVANHPVVPVEGPD-PN----NGAVSAAPWGSA 756 (954)
T ss_pred ----cCCCEEEecCCcccCcCccCCCCccchhhhhhhhh-------hhccCCCCcCCCCCC-CC----CCceeecccchH
Confidence 289999999999999999999988765 12121 2332211 0000000 00 11111 12
Q ss_pred --chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----CeeEEEEEecCCCcchhhhhhhhhcccc
Q 010125 374 --SLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC----HFAVVCFRVSPSPVLMDKLKTKYVNCLL 447 (517)
Q Consensus 374 --al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 447 (517)
++..|..++.+|.+ +.+.-.....+++|++++|.+. +++...+ .+.-+.+...+.. ...
T Consensus 757 ~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~-----------~~~- 821 (954)
T PRK12566 757 SILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLK-----------AQT- 821 (954)
T ss_pred HHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccc-----------ccc-
Confidence 35778888888998 8887787899999999999763 4443322 1222233322110 000
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 448 SEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 448 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
......+.++|.+.|+.... ..+.....+|++.+ ...+++|||+++++|+++.+++.
T Consensus 822 ------g~~~~dvakRL~d~Gihapt-~~fPv~~~LmIepT-E~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 822 ------GISEEDVAKRLMDYGFHAPT-MSFPVPGTLMVEPT-ESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred ------CCCHHHHHHHHHHCCcEEeE-EeeccCCEEEEEee-eeCCHHHHHHHHHHHHHHHHHHH
Confidence 01124567777777764322 23445668999985 57788899999999999988864
No 49
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.93 E-value=1.4e-23 Score=215.17 Aligned_cols=309 Identities=14% Similarity=0.117 Sum_probs=206.6
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
++.+.+++++|.++ ..+++||++++..++.+... +++.|+++...|+|...+++..|+
T Consensus 55 ~~~e~lA~~~g~~~---------~~i~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~h~s~~~~~~~~g~-- 112 (370)
T TIGR02539 55 DFLEDLAEFLGMDE---------ARVTHGAREGKFAVMHALCK-----------EGDWVVLDGLAHYTSYVAAERAGL-- 112 (370)
T ss_pred HHHHHHHHHhCCCc---------eEEECChHHHHHHHHHHhhC-----------CCCEEEECCcccHHHHHHHHHcCC--
Confidence 44566899999874 46789999998776665532 556788889999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHhHhc-CCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccccc
Q 010125 217 KNFRAIKTTKSSSYGLSPDSLMAQINSDVEV-GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 295 (517)
Q Consensus 217 ~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~-g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~ 295 (517)
+++.+|.+.+.++.+|+++|++++++.++. +..+.+|+++++++++|.+.|+++|+++|++||++++||+||+.+.+.
T Consensus 113 -~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~ 191 (370)
T TIGR02539 113 -NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP 191 (370)
T ss_pred -EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC
Confidence 999999875446899999999999764322 124568888999999999999999999999999999999999876432
Q ss_pred CccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccccccccCCCccccCCCC-CC
Q 010125 296 CPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTN-PEYLKNKATESMQVVDYKDWQITLSRR-FR 373 (517)
Q Consensus 296 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~ 373 (517)
.+. .. .++|.++.++|||++.+.++|++++++. .. +.+... .+|..... . .+..+.. ..
T Consensus 192 ~~~-~~-----~~~di~v~s~sK~~~~~g~~G~l~~~~~-~i-~~l~~~~~~~~~~~~-------~----~~~~~~~~~~ 252 (370)
T TIGR02539 192 VSA-KE-----IGADFIVGSGHKSMAASGPCGVLGMSEE-WE-DIVLRKSRYSPVKEV-------E----LLGCTSRGAP 252 (370)
T ss_pred CCH-HH-----cCCCEEEeeCcccccCCCCEEEEEECHH-HH-hhhcccccCCcccee-------e----eecccccccH
Confidence 211 11 1589999999999987777898887643 22 233222 22221110 0 0111111 12
Q ss_pred chHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cCCCeeEEEEEecCCCcchhhhhhhhhccccchHH
Q 010125 374 SLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV--FPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEE 451 (517)
Q Consensus 374 al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (517)
+..++.++... .+.+ +..++..++++++++.|+++ +++++ .++..+++.+++..... ...
T Consensus 253 ~~~~~~al~~~-~~~l-~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~---------------~~~ 314 (370)
T TIGR02539 253 IVTMMASFPHV-VERV-KRWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHE---------------IAQ 314 (370)
T ss_pred HHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhH---------------Hhh
Confidence 23334444321 2222 23445566678999999987 78874 35667788777532100 000
Q ss_pred HHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 452 QINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 452 ~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
..+.....+.++|.++|+..+.+ ....++|++++ ..+++|++++++.|+++.++
T Consensus 315 ~~~~~~~~~~~~L~e~GI~~ir~---~~~~~iRis~~--~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 315 KHKRRGYFLYEELKKRGIHGIRS---GQTKYFKLSVY--GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred hhccccHHHHHHHHhCCCccccC---CcceEEEEEec--CCCHHHHHHHHHHHHHHHHh
Confidence 00112356788888888752222 22458999984 34778999999999887654
No 50
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=6.5e-24 Score=216.54 Aligned_cols=288 Identities=11% Similarity=0.064 Sum_probs=197.7
Q ss_pred cceeCCCCCChHHHHHHHHHhccc---cccc--ccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGFN---IVGF--NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 170 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~n---~~~~--~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 170 (517)
||++...++.++.+ .+.+...+. .+.. .+..+.....+.+++++++++++|.+++ .+++++|+|+++
T Consensus 1 yld~a~~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~a~ 72 (353)
T TIGR03235 1 YLDHNATTPIDPAV-AEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-------EVIFTSGATESN 72 (353)
T ss_pred CCCCCCCCCCCHHH-HHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHH
Confidence 56666555554544 444443331 1111 1222334556677899999999999765 689999999999
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH---HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhc
Q 010125 171 LCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA---QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEV 247 (517)
Q Consensus 171 ~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa---~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~ 247 (517)
..++.+.... +.. .++..|+++...|+|+.... +..|+ +++.||+++ ++.+|+++|++++++++
T Consensus 73 ~~~l~~l~~~-----~~~-~g~~~vi~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~--~~~~d~~~l~~~l~~~~-- 139 (353)
T TIGR03235 73 NLAILGLARA-----GEQ-KGKKHIITSAIEHPAVLEPIRALERNGF---TVTYLPVDE--SGRIDVDELADAIRPDT-- 139 (353)
T ss_pred HHHHHHHHHh-----ccc-CCCCeeeEcccccHHHHHHHHHHHhcCC---EEEEEccCC--CCcCCHHHHHHhCCCCC--
Confidence 8877665432 110 12367889999999876654 34577 999999875 46899999999986543
Q ss_pred CCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcce
Q 010125 248 GLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCC 327 (517)
Q Consensus 248 g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g 327 (517)
.+|++++++|++|.+.|+++|+++|++||+|+|||++++.+....+- . ..++|++++++|||+ +|.|+|
T Consensus 140 ----~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~-~-----~~~~D~~~~s~~K~~-gp~g~g 208 (353)
T TIGR03235 140 ----LLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDL-S-----ADRIDLISCSGHKIY-GPKGIG 208 (353)
T ss_pred ----EEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccc-c-----ccCCCEEEeehhhcC-CCCceE
Confidence 48889999999999999999999999999999999999887765432 1 127999999999995 688999
Q ss_pred EEEEeCchhHHhhhcCCccccCCccccccccccCCCcccc-CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHH
Q 010125 328 CLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQIT-LSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFER 405 (517)
Q Consensus 328 ~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~-~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~ 405 (517)
+++++++.... ....+ ++..... . ..++ ++... ..+.+..+++.+ .++.+++.+++.++++++++
T Consensus 209 ~l~~~~~~~~~--~~~~~-~~~~~~~--------~-~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~ 275 (353)
T TIGR03235 209 ALVIRKRGKPK--APLKP-IMFGGGQ--------E-RGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRD 275 (353)
T ss_pred EEEEccCcccc--cccCc-eeeCCCC--------c-CccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHH
Confidence 99998763211 11122 1111100 0 0111 11111 224555566654 35788889999999999999
Q ss_pred HHhcCCCeEEecCCC---eeEEEEEec
Q 010125 406 LVSGDKRFEIVFPCH---FAVVCFRVS 429 (517)
Q Consensus 406 ~l~~~~~~~l~~~~~---~~~v~f~~~ 429 (517)
.|++ ++++++.++. ..+++|.+.
T Consensus 276 ~l~~-~g~~~~~~~~~~~~~i~~~~~~ 301 (353)
T TIGR03235 276 ALQT-LGVKLNGDPAETIPHILNFSID 301 (353)
T ss_pred Hhcc-CCeEEeCCcccccCCEEEEEeC
Confidence 9988 7999875432 456788764
No 51
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.93 E-value=1.9e-23 Score=213.05 Aligned_cols=341 Identities=13% Similarity=0.107 Sum_probs=222.9
Q ss_pred CCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHH
Q 010125 100 FPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARD 179 (517)
Q Consensus 100 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~ 179 (517)
.|++..++..+.+.+...++. | ++....+..++++.+++++|.++.. ...++++|||+++..++.....
T Consensus 4 ~p~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~-----~~i~~~~~gt~~l~~~~~~~~~ 72 (355)
T TIGR03301 4 TPGPLSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNH-----TCVLLQGSGTFAVEATIGSLVP 72 (355)
T ss_pred cCCCCCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCC-----cEEEEeCCcHHHHHHHHHhccC
Confidence 455566666666666553332 2 2233466778899999999998642 1467899999999877765532
Q ss_pred HHHHHhcccCCCCeEEEeCCCCchH-HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeec
Q 010125 180 RVLNKIGRENISKLIVYGSDQTHCA-LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATI 258 (517)
Q Consensus 180 ~~~~~~g~~~~~~~~v~~s~~~H~s-~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~ 258 (517)
. ++.+++++...|.+ +..+++..|+ +++.++.+. ++.+|+++|++++++++ ...+|+.++
T Consensus 73 ~----------~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~----~~~~v~~~~ 133 (355)
T TIGR03301 73 R----------DGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSE--YEPPDLNRIEEALAADP----DITHVATVH 133 (355)
T ss_pred C----------CCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCC--CCCCCHHHHHHHHHhCC----CceEEEEEe
Confidence 1 33455555555544 5678888999 999999864 46899999999997542 234677788
Q ss_pred cCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHH
Q 010125 259 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALV 338 (517)
Q Consensus 259 gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~ 338 (517)
.+|++|.+.|+++|+++|++||++++||++++.+....+ ... -++|+++.++|||+++|.|+|+++++++. +.
T Consensus 134 ~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-~~~-----~~~d~~~~s~~K~l~~~~G~g~~~~~~~~-~~ 206 (355)
T TIGR03301 134 HETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-IEE-----LDVDALIASANKCLEGVPGFGFVIARRDL-LE 206 (355)
T ss_pred cCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-hhh-----cCccEEEecCCcccccCCceeEEEECHHH-HH
Confidence 899999999999999999999999999998765433221 111 16899999999999888899999987653 22
Q ss_pred hhhcCCccccCCccccccccccCCCccccCCCCC-----CchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCC
Q 010125 339 SSLSTNPEYLKNKATESMQVVDYKDWQITLSRRF-----RSLKLWFVIRNYGVAN-LRHFLRSHVNMAKLFERLVSGDKR 412 (517)
Q Consensus 339 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~g-~~~~i~~~~~~a~~l~~~l~~~~~ 412 (517)
.......++..+... ...+. ......++ ...++..+++.+..+| +.+..++..++++++.+.|++. +
T Consensus 207 ~~~~~~~~~~~~~~~----~~~~~--~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g 279 (355)
T TIGR03301 207 ASAGNARSLYLDLYD----QWAYM--EKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-G 279 (355)
T ss_pred HhhCCCCCceeeHHH----HHHHh--hhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 211111111111000 00000 00011111 1134455676665565 8888999999999999999887 7
Q ss_pred eEEecCCC--ee-EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecC
Q 010125 413 FEIVFPCH--FA-VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGA 489 (517)
Q Consensus 413 ~~l~~~~~--~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~ 489 (517)
++++.++. .+ +++|++++.. .....++.++|.++|.+.... ......++|+++.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~l~~~gi~i~~~-~~~~~~~iRis~~- 336 (355)
T TIGR03301 280 FQPLLPERWQSPIIVSFLYPDDP---------------------DFDFDDFYQELKERGFVIYPG-KLTLADTFRIGTI- 336 (355)
T ss_pred CeeecCCCCCCCcEEEEECCCCC---------------------cchHHHHHHHHHHCCEEEECC-ccccccEEEEecC-
Confidence 88764432 23 3556654310 011346777787888654333 2222368999984
Q ss_pred CCCcHHHHHHHHHHHHHH
Q 010125 490 TLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 490 ~~t~~~di~~l~~~l~~~ 507 (517)
..++++|++++++.|+++
T Consensus 337 ~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 337 GEIDAADIERLLEAIKDA 354 (355)
T ss_pred CCCCHHHHHHHHHHHHhh
Confidence 456788999999999764
No 52
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=3.9e-23 Score=211.76 Aligned_cols=344 Identities=13% Similarity=0.105 Sum_probs=245.5
Q ss_pred ceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHH
Q 010125 97 FAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTA 176 (517)
Q Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ 176 (517)
++.-.+....|..+.+.+...++.....|..+.+..+|.+.+++++.+.+|++... ..++++|+|+++|+..++.+
T Consensus 33 l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~----~~eiivt~Ga~~al~~~~~a 108 (393)
T COG0436 33 LSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP----EEEIIVTAGAKEALFLAFLA 108 (393)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCCHHHHHHHHHHH
Confidence 33333345667777777777665543266688899999999999999999854321 12599999999999998887
Q ss_pred HHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHhHhcCCcceEEE
Q 010125 177 ARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAQINSDVEVGLIPLFLC 255 (517)
Q Consensus 177 ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~-~~~~~d~~~Le~~i~~~~~~g~~p~~vv 255 (517)
..+ +++.|++.++.+.++...+.++|. +++.||++.+ .+|.+|++.|+++++++++ +|+
T Consensus 109 ~~~-----------pGDeVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk------~i~ 168 (393)
T COG0436 109 LLN-----------PGDEVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITPKTK------AII 168 (393)
T ss_pred hcC-----------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCccce------EEE
Confidence 765 667789999999999999999999 9999998654 3799999999999999765 899
Q ss_pred eeccCCcccccc---ChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCC-eeee-ccccccC-CCCcceEE
Q 010125 256 ATIGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD-SFSL-NAHKWFF-ATLDCCCL 329 (517)
Q Consensus 256 ~t~gtt~~G~id---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aD-si~~-~~hK~l~-~p~~~g~l 329 (517)
++.|+||||++- .+++|+++|++||+|++.|.+|....+....+.+.+.-....| .+++ +++|.++ +.+.+|++
T Consensus 169 ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~ 248 (393)
T COG0436 169 LNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWV 248 (393)
T ss_pred EeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEe
Confidence 999999999984 4899999999999999999999887654322222222111122 5566 5999997 55889999
Q ss_pred EEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc----HHHHHHHHHHHHHHHHHHHH
Q 010125 330 WVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG----VANLRHFLRSHVNMAKLFER 405 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g----~~g~~~~i~~~~~~a~~l~~ 405 (517)
...++... +.+.....|+. .|. ..+...++..++. .+..+.+.+...++++.+.+
T Consensus 249 v~~~~~l~-~~~~~~~~~~~-----------------~~~---~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~ 307 (393)
T COG0436 249 VGPPEELI-AALRKLKSYLT-----------------SCA---PTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVE 307 (393)
T ss_pred ecChHHHH-HHHHHHHHhcc-----------------cCC---CHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHH
Confidence 88754332 22221111211 111 2233344444442 23566666788999999999
Q ss_pred HHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeEC---CEe
Q 010125 406 LVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINAS-GKAYMTHAVLG---GIY 481 (517)
Q Consensus 406 ~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~---g~~ 481 (517)
.|.+++++++..+|+..++.|.-.+.. ....++.++|.++ |++.+++..++ |.+
T Consensus 308 ~l~~~~g~~~~~~p~Ga~Y~~~~i~~~----------------------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~ 365 (393)
T COG0436 308 ALNEIGGLSVVKPPEGAFYLFPKIPEL----------------------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEG 365 (393)
T ss_pred HHHhcCCeeeccCCCeeEEEEeecCCC----------------------CCHHHHHHHHHHhCCEEEecccccCCCCCCC
Confidence 999998899987688888877655431 1124455555444 55555555553 457
Q ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 482 AIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 482 ~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
++|+++.. +.++++++++.|.+..+.
T Consensus 366 ~vRis~~~---~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 366 YVRLSLAT---SEETLEEALRRLARFLAE 391 (393)
T ss_pred eEEEEEec---CHHHHHHHHHHHHHHHHh
Confidence 99999854 447899999888877654
No 53
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.92 E-value=9.7e-23 Score=209.10 Aligned_cols=349 Identities=13% Similarity=0.102 Sum_probs=225.2
Q ss_pred eCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHH
Q 010125 99 YFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 178 (517)
Q Consensus 99 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar 178 (517)
+.|++......+.+.+...+ ..| ++...+...++++.+++++|.+++. ...+++++||+++..++....
T Consensus 9 ~~pgP~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~-----~~i~~~~~gt~~l~~~~~~l~ 77 (368)
T PRK13479 9 LTPGPLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY-----TCVPLQGSGTFSVEAAIGSLV 77 (368)
T ss_pred ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCcHHHHHHHHHhcc
Confidence 44555555555555554433 222 2445567788999999999986531 147799999999987776653
Q ss_pred HHHHHHhcccCCCCeEEEeCCCCchHH--HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEe
Q 010125 179 DRVLNKIGRENISKLIVYGSDQTHCAL--QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCA 256 (517)
Q Consensus 179 ~~~~~~~g~~~~~~~~v~~s~~~H~s~--~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~ 256 (517)
. ++..|++....++.. .+.++..|+ +++.||.+. ++.+|+++|++++++.++ ..+|.+
T Consensus 78 ~-----------~~~~vlv~~~~~~~~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~l~~~~~----~~~v~~ 137 (368)
T PRK13479 78 P-----------RDGKVLVPDNGAYGARIAQIAEYLGI---AHVVLDTGE--DEPPDAAEVEAALAADPR----ITHVAL 137 (368)
T ss_pred C-----------CCCeEEEEeCCchHHHHHHHHHHcCC---cEEEEECCC--CCCCCHHHHHHHHHhCCC----CcEEEE
Confidence 2 233344444555543 578888999 999999874 458999999999875432 236788
Q ss_pred eccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchh
Q 010125 257 TIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRA 336 (517)
Q Consensus 257 t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~ 336 (517)
++++|++|.+.|+++|+++|+++|++++||++++.+....+ .. . .++|.+++++|||+++|.|+|+++++++.
T Consensus 138 ~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~-~~----~-~~~d~~v~s~~K~l~g~~G~G~l~~~~~~- 210 (368)
T PRK13479 138 VHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPID-IA----E-LGIDALISSANKCIEGVPGFGFVIARRSE- 210 (368)
T ss_pred EcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcccc-cc----c-cCceEEEecCccccccCCCceEEEECHHH-
Confidence 99999999999999999999999999999987755433221 11 1 16899999999999999999999997543
Q ss_pred HHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 337 LVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVA-NLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 337 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
+........+|..+.............+.+ +.. .....+..+++.+..+ ++++++++..++++++.+.|++. +++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 287 (368)
T PRK13479 211 LEACKGNSRSLSLDLYDQWAYMEKTGQWRF--TPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFE 287 (368)
T ss_pred HHHhhcCCCCeeecHHHHHhhhcccCCCCC--CCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 222111112221110000000000000000 111 1223556677666444 47888899999999999999887 788
Q ss_pred EecCC--Ce-eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCC
Q 010125 415 IVFPC--HF-AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATL 491 (517)
Q Consensus 415 l~~~~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~ 491 (517)
++.++ .. .+++|.+.... .....++.++|.++|++... .......++|++++. .
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~l~~~L~~~gi~v~~-g~~~~~~~iRis~~~-~ 344 (368)
T PRK13479 288 PLLDAEIQSPIIVTFHAPADP---------------------AYDFKEFYERLKEQGFVIYP-GKLTQVDTFRIGCIG-D 344 (368)
T ss_pred ccCCchhcCceEEEEECCCCC---------------------CcCHHHHHHHHHHCCEEEec-CCCCCCCEEEEecCC-C
Confidence 76443 22 34667654320 01124677888888875433 222223579998754 5
Q ss_pred CcHHHHHHHHHHHHHHHHHH
Q 010125 492 TEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 492 t~~~di~~l~~~l~~~~~~l 511 (517)
++++|++++++.|+++.+++
T Consensus 345 ~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 345 VDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CCHHHHHHHHHHHHHHHHHc
Confidence 67889999999999887765
No 54
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.1e-22 Score=202.47 Aligned_cols=326 Identities=13% Similarity=0.090 Sum_probs=230.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCch--
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHC-- 203 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~-- 203 (517)
.-+|....+-+++.+.|..+++.+... -.+++++||.+...++..... +++.|++....-+
T Consensus 31 h~s~~F~~~~~~~~~~L~~v~~t~~~~------~~ll~gsGt~amEAav~sl~~-----------pgdkVLv~~nG~FG~ 93 (383)
T COG0075 31 HRSPDFVGIMKEVLEKLRKVFGTENGD------VVLLSGSGTLAMEAAVASLVE-----------PGDKVLVVVNGKFGE 93 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCc------EEEEcCCcHHHHHHHHHhccC-----------CCCeEEEEeCChHHH
Confidence 356889999999999999999988532 568889999887776665543 4445555555554
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 204 ALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 204 s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
-+.+.++..|. +++.+...+.. .+|+++++++|+++.. ..+|.++++.|+||..+|+++|+++|++||..+
T Consensus 94 R~~~ia~~~g~---~v~~~~~~wg~--~v~p~~v~~~L~~~~~----~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~ 164 (383)
T COG0075 94 RFAEIAERYGA---EVVVLEVEWGE--AVDPEEVEEALDKDPD----IKAVAVVHNETSTGVLNPLKEIAKAAKEHGALL 164 (383)
T ss_pred HHHHHHHHhCC---ceEEEeCCCCC--CCCHHHHHHHHhcCCC----ccEEEEEeccCcccccCcHHHHHHHHHHcCCEE
Confidence 47889999999 99999988643 8899999999985432 238999999999999999999999999999999
Q ss_pred Ecccccccccc--cCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC-Cc-cccCCcccc-cccc
Q 010125 284 HVDAAYAGSAC--ICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST-NP-EYLKNKATE-SMQV 358 (517)
Q Consensus 284 hvDaA~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~-~yl~~~~~~-~~~~ 358 (517)
+||+.-+.+.. ..+++ ++|.+....+|+|++|.|.|++.++++.... .... .+ -|+.-.... ....
T Consensus 165 iVDaVsS~Gg~~~~vd~w--------giDv~itgSQK~l~~PPGla~v~~S~~a~e~-~~~~~~~~~ylDL~~~~~~~~~ 235 (383)
T COG0075 165 IVDAVSSLGGEPLKVDEW--------GIDVAITGSQKALGAPPGLAFVAVSERALEA-IEERKHPSFYLDLKKWLKYMEK 235 (383)
T ss_pred EEEecccCCCcccchhhc--------CccEEEecCchhccCCCccceeEECHHHHHH-HhcCCCCceeecHHHHHHHHhh
Confidence 99985543333 33332 8999999999999999999999998776432 2222 22 233211100 0000
Q ss_pred ccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEecCCCcchh
Q 010125 359 VDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC--HFAVVCFRVSPSPVLMD 436 (517)
Q Consensus 359 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~ 436 (517)
....++|...+ .-+++..+++.+-.+|++++++|+..+++++++.++++ ||+++.++ .+++|+-...|.+.
T Consensus 236 ~~~~p~Tppv~---~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g~--- 308 (383)
T COG0075 236 KGSTPYTPPVN---LIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEGV--- 308 (383)
T ss_pred cCCCCCCCCHH---HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCCC---
Confidence 01111111111 22577778888889999999999999999999999998 89988633 34444444444421
Q ss_pred hhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeee-eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 437 KLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHA-VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
+ ..++...+.+++.+.+++. ......++||..|+ ..+..|+..++.+|..+.+++..
T Consensus 309 -----------------~--~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG-~~~~~dv~~~l~ale~~L~~~g~ 366 (383)
T COG0075 309 -----------------D--DKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMG-NVRPEDVLAALAALEAALRELGV 366 (383)
T ss_pred -----------------C--cHHHHHHHHHhCCEEecccccccCccEEEEecCc-cCCHHHHHHHHHHHHHHHHHcCC
Confidence 1 1222334445544444443 22334589999998 78888999999999999887643
No 55
>PLN02721 threonine aldolase
Probab=99.92 E-value=7.2e-23 Score=208.77 Aligned_cols=305 Identities=17% Similarity=0.126 Sum_probs=193.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
.+|...++|+.+.+| +|.+ .++++++||++++.++.+.... +++.|++++.+|+++.
T Consensus 38 ~~~~~~~l~~~la~~----~~~~---------~~~~~~~Gs~a~~~~l~~~~~~----------~gd~Vl~~~~~~~~~~ 94 (353)
T PLN02721 38 YDPTALRLEEEMAKI----FGKE---------AALFVPSGTMGNLISVLVHCDV----------RGSEVILGDNSHIHLY 94 (353)
T ss_pred CCHHHHHHHHHHHHH----hCCc---------eeEEecCccHHHHHHHHHHccC----------CCCeEEEcCccceehh
Confidence 356666777665555 5543 3588888999988777664321 4567888999998887
Q ss_pred H---HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcC-CcceEEEeec-cCCccccccC---hhHHHHHHHH
Q 010125 207 K---AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVG-LIPLFLCATI-GTTAITAVDP---LKPLCDVAKQ 278 (517)
Q Consensus 207 k---aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g-~~p~~vv~t~-gtt~~G~idp---l~eI~~i~~~ 278 (517)
+ .+...|+ +++.+|.++ ++.+|+++|+++|++....+ ..+.+|+++. .++++|.+.| +++|+++|++
T Consensus 95 ~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~ 169 (353)
T PLN02721 95 ENGGISTLGGV---HPRTVKNNE--DGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR 169 (353)
T ss_pred cccchhhhcCc---eeEecCCCc--CCCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH
Confidence 7 4677788 999999864 57899999999997432111 1234666655 5667887644 8899999999
Q ss_pred hCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 279 FGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
||+|+|+|+||..+....... .......++|++++++|||++.|. |.+++.+++... .+.....+..
T Consensus 170 ~g~~livD~a~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~-~~~~~~~~~~--------- 236 (353)
T PLN02721 170 HGLKLHIDGARIFNASVALGV-PVHRLVKAADSVSVCLSKGLGAPV--GSVIVGSKSFIR-KAKRLRKTLG--------- 236 (353)
T ss_pred cCCEEEEEchhhhcchhhhCC-CHHHHhhhCCEEEEecccccCCce--eeEEecCHHHHH-hHHHHHHhcC---------
Confidence 999999999885332111111 111113478999999999998774 444445554322 1111000000
Q ss_pred ccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCCeeEEEEEecCCCcchhh
Q 010125 359 VDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEI-VFPCHFAVVCFRVSPSPVLMDK 437 (517)
Q Consensus 359 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l-~~~~~~~~v~f~~~~~~~~~~~ 437 (517)
++.+........++. +.+...+.+++..++++++.+.|++++++++ +.++..+++.|++....
T Consensus 237 ---------~~~~~~~~~~~~~~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----- 300 (353)
T PLN02721 237 ---------GGMRQVGVLAAAALV--ALQENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS----- 300 (353)
T ss_pred ---------CCeehhHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc-----
Confidence 000001111111221 1122233445556788899999999888865 55666777777764310
Q ss_pred hhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 438 LKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
......+.++|.+.|+..... +..++|+++ ++.++++|+++++++|+++..
T Consensus 301 ----------------~~~~~~~~~~L~~~gi~v~~~----~~~~lR~~~-~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 301 ----------------RITAEKLCKSLEEHGVLLMPG----NSSRIRVVT-HHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred ----------------cccHHHHHHHHHhCCcEEecC----CCceEEEEe-cCcCCHHHHHHHHHHHHHHhh
Confidence 011356778888778765433 346899998 467789999999999988764
No 56
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=7.9e-23 Score=197.63 Aligned_cols=308 Identities=19% Similarity=0.173 Sum_probs=203.9
Q ss_pred ccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCC
Q 010125 120 IVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSD 199 (517)
Q Consensus 120 ~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~ 199 (517)
.....|..+|....+| +++++++|. . .++|+++||+||..+|.+..+ +.-.|+|.+
T Consensus 26 ~~~~~YG~D~~~~~~e----~~~ae~~g~-~--------a~~Fv~sGT~aN~lal~~~~~-----------~~~~vi~~~ 81 (342)
T COG2008 26 VGDDVYGEDPTTNALE----QRIAELFGK-E--------AALFVPSGTQANQLALAAHCQ-----------PGESVICHE 81 (342)
T ss_pred cCCCCCCCCHHHHHHH----HHHHHHhCC-c--------eEEEecCccHHHHHHHHHhcC-----------CCCeEEEec
Confidence 3356788888777666 567788877 2 589999999999999988763 566799999
Q ss_pred CCchHHHH--HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhH-hcCCcceEEEeeccCCccccccC---hhHHH
Q 010125 200 QTHCALQK--AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDV-EVGLIPLFLCATIGTTAITAVDP---LKPLC 273 (517)
Q Consensus 200 ~~H~s~~k--aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~-~~g~~p~~vv~t~gtt~~G~idp---l~eI~ 273 (517)
.+|..... +...++- +.+++..++.+|.|++++|+..|..+. -...+|.++..+..| ..|.+-| |++|.
T Consensus 82 ~aHi~~~E~Ga~~~~~~----~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~ 156 (342)
T COG2008 82 TAHIYTDECGAPEFFGG----GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAIS 156 (342)
T ss_pred cccceecccCcHHHHcC----CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHH
Confidence 99988776 3455552 344555554578999999999998632 223456666666655 7798855 66777
Q ss_pred HHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 010125 274 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKAT 353 (517)
Q Consensus 274 ~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 353 (517)
++||+||+.||+|||.-+.++.... .....--.++||+++.+.|.++.| .|.+++-+.....++ .|......
T Consensus 157 ~~~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D~v~~~~tK~g~~~--~gAiv~gn~~~~~~a-----~~~rK~~G 228 (342)
T COG2008 157 AVCKEHGLPLHMDGARLANALVALG-VALKTIKSYVDSVSFCLTKGGGAP--VGAIVFGNRDFAKRA-----RRWRKRAG 228 (342)
T ss_pred HHHHHhCCceeechHHHHHHHHHcC-CCHHHHHhhCCEEEEecccCCcce--eeeEEEcCHHHHHHH-----HHHHHHhc
Confidence 8899999999999987554443322 111111248999999999999987 455666565543322 22211100
Q ss_pred cccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCc
Q 010125 354 ESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPV 433 (517)
Q Consensus 354 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~ 433 (517)
++-|..+-+++ ..+-++..+-+...-++..++|++|.+.+.+.||+++..+++.|+|..++...
T Consensus 229 -------------gl~~k~r~laA-~~~~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~-- 292 (342)
T COG2008 229 -------------GLMRKARFLAA-QGLYALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPES-- 292 (342)
T ss_pred -------------ccHhhhhHHHH-HHHHHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECChH--
Confidence 11122222211 11122333445556677777899999999988999998888999888777532
Q ss_pred chhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCE--eEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 434 LMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGI--YAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~--~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
. .+.+...|..+... .+.+. ..+|++. ++.|+++||++++..++++.
T Consensus 293 -------------------------~-i~~l~~~~~~~~~~-~~~~~~~~~vRfvt-s~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 293 -------------------------A-IEALRLAGALFYRG-VLIGAHGEIVRFVT-SWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -------------------------H-HHHHHhhchhheee-eeccCCCceEEEEe-eccCCHHHHHHHHHHHHHhh
Confidence 1 13333344433221 22221 4799986 89999999999999888763
No 57
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.91 E-value=1.3e-22 Score=212.98 Aligned_cols=340 Identities=12% Similarity=0.086 Sum_probs=216.7
Q ss_pred cceeCCCCCChHHHHHHHHHhcc-------cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEc---CC
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGF-------NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ---GT 165 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~-------n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t---~g 165 (517)
.+...++-...+..+.+.+.+.+ |+....+........+|+.+++.++++||.+++ ...++ +|
T Consensus 36 ~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~-------~~~~~~~~~s 108 (452)
T PTZ00094 36 GLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPE-------EWGVNVQPYS 108 (452)
T ss_pred CeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcc-------cceeecCCCc
Confidence 45555554444444444444433 222233333445678888889999999998754 23344 78
Q ss_pred chHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc--------CCCCCCEEEEecCCCCCcccCHHHH
Q 010125 166 TCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV--------GIDVKNFRAIKTTKSSSYGLSPDSL 237 (517)
Q Consensus 166 gt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~--------G~g~~~v~~vp~d~~~~~~~d~~~L 237 (517)
||+||+.++.+..+ +++.|++++..|.+....+..+ |.+ -.+..++++. +|.+|+++|
T Consensus 109 gt~an~~v~~al~~-----------~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~-~~~~~~~~~~--~g~id~~~L 174 (452)
T PTZ00094 109 GSPANFAVYTALLQ-----------PHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIY-FESLPYQVNE--KGLIDYDKL 174 (452)
T ss_pred hHHHHHHHHHHhcC-----------CCCEEEecccccCCcccccccccccccccceee-eeeeecccCC--CCCcCHHHH
Confidence 99999887766522 5567888888997765433211 110 0344555664 479999999
Q ss_pred HHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccc
Q 010125 238 MAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAH 317 (517)
Q Consensus 238 e~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~h 317 (517)
++++++.+ |.+|+++ .+.+|.+.|+++|+++|+++|+++|||+||+.+.+..+-... .+.++|.+++++|
T Consensus 175 ~~~l~~~~-----~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~h 244 (452)
T PTZ00094 175 EELAKAFR-----PKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTH 244 (452)
T ss_pred HHHHHHhC-----CCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCc
Confidence 99997532 2244443 446899999999999999999999999999998876532221 1237999999999
Q ss_pred cccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHH
Q 010125 318 KWFFATLDCCCLWVKDPRALVSSLSTN-PEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVANLRHFLRS 395 (517)
Q Consensus 318 K~l~~p~~~g~l~~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~i~~ 395 (517)
|||++|.| |++++++... . .+... ...++. .++++-. ....++..+++.+...+++++.++
T Consensus 245 K~l~GP~G-g~l~~~~~~~-~-~l~~~~~~~~~p--------------~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~ 307 (452)
T PTZ00094 245 KSLRGPRS-GLIFYRKKVK-P-DIENKINEAVFP--------------GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQ 307 (452)
T ss_pred cCCCCCCc-eEEEEecccc-h-HHHHhhccccCC--------------CCCCCchHHHHHHHHHHHHHHhChhHHHHHHH
Confidence 99999996 8888765421 1 11000 001110 0111211 133456667777655677888899
Q ss_pred HHHHHHHHHHHHhcCCCeEEecC---CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEE
Q 010125 396 HVNMAKLFERLVSGDKRFEIVFP---CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYM 472 (517)
Q Consensus 396 ~~~~a~~l~~~l~~~~~~~l~~~---~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~ 472 (517)
..+++++|.+.|++. ++++..+ ....++.|...+. ....+...|.+.|+. +
T Consensus 308 i~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~~~------------------------~~~~~~~~L~~~gI~-v 361 (452)
T PTZ00094 308 VLKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPFGI------------------------TGSKMEKLLDAVNIS-V 361 (452)
T ss_pred HHHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcCCC------------------------CHHHHHHHHHHCCcE-E
Confidence 999999999999886 8888742 2233444443221 124555666566764 3
Q ss_pred eee-eEC-----CEeEEEEEecCCCCc----HHHHHHHHHHHHHHHHH
Q 010125 473 THA-VLG-----GIYAIRFATGATLTE----KRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 473 ~~~-~~~-----g~~~lR~~~~~~~t~----~~di~~l~~~l~~~~~~ 510 (517)
+.. ... ...++|+++ +..|+ ++||+++++.|.++...
T Consensus 362 s~~~~p~~~~~~~~~~vRis~-~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 362 NKNTIPGDKSALNPSGVRLGT-PALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred ecccCCCCCcCCCCCeEEECC-HHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 321 111 136899998 45555 89999999999988764
No 58
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.91 E-value=3.1e-22 Score=223.07 Aligned_cols=309 Identities=13% Similarity=0.002 Sum_probs=202.0
Q ss_pred CccceeCCCCCChHHHHHHHHHhcc-----cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchH
Q 010125 94 PNYFAYFPSSGSIAGFLGEMLSSGF-----NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 168 (517)
Q Consensus 94 p~~~~~~~~~~~~~~~~~~~l~~~~-----n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 168 (517)
-.||++..+++.++..+.+++...+ |+. ..+..+..++++-+++++.+++++|.++.. -.++||+|+|+
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~-s~~~~s~~~~~~~e~aR~~ia~~lga~~~~-----~~VvFtsnaT~ 108 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPH-SQSDSSMRSSDTIESARQQVLEYFNAPPSD-----YACVFTSGATA 108 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCC-cCcchhhhHHHHHHHHHHHHHHHhCCCccc-----eEEEEeCChHH
Confidence 3589988777766667766654432 333 233345556767778999999999996541 14799999999
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHH---HHHcCCCCCCEEEEecCCC------CCcccCH--HHH
Q 010125 169 AILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKA---AQIVGIDVKNFRAIKTTKS------SSYGLSP--DSL 237 (517)
Q Consensus 169 a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ka---a~~~G~g~~~v~~vp~d~~------~~~~~d~--~~L 237 (517)
|+..+..... +. ++..|+++...|.|+... ++..|+ +++.+|++.. +.+.+++ ++|
T Consensus 109 alnlva~~l~--------~~--~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~~~~~~~~g~~~~~~~~l 175 (805)
T PLN02724 109 ALKLVGETFP--------WS--SESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAANQPTNSQGSVVVKSRGL 175 (805)
T ss_pred HHHHHHHHCC--------CC--CCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhccccccccccccccchhhh
Confidence 9876543321 11 455678888899876543 344588 8999988621 1234443 667
Q ss_pred HHHHHHhH----hcCCcceEEEeeccCCccccccChhHHHHHHHHh-------C-CeEEcccccccccccCccccccccC
Q 010125 238 MAQINSDV----EVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF-------G-IWVHVDAAYAGSACICPEFRHFIDG 305 (517)
Q Consensus 238 e~~i~~~~----~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~-------g-i~lhvDaA~g~~~~~~~~~~~~~~g 305 (517)
++.++... ..+....+|++++.++.+|.+.|+++|..+++.. | ++++||||++.+....+- ..+
T Consensus 176 ~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv-~~~--- 251 (805)
T PLN02724 176 QRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDL-SRY--- 251 (805)
T ss_pred hhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCCh-hhc---
Confidence 76643110 1112235899999999999999999876655542 3 579999999988877642 221
Q ss_pred CCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccc---cc-c---cccCCCccccCCC-CC-CchH
Q 010125 306 VEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATE---SM-Q---VVDYKDWQITLSR-RF-RSLK 376 (517)
Q Consensus 306 ~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~---~~-~---~~~~~~~~~~~sr-~~-~al~ 376 (517)
++|++++++|||++.|.|+|+|++|++.. . .+ .+.|..+.... .. . ........++.+. .+ ..++
T Consensus 252 --~~Dfl~~S~HK~~GgP~G~G~L~vr~~~~-~-~l--~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~ 325 (805)
T PLN02724 252 --PADFVVVSFYKIFGYPTGLGALLVRRDAA-K-LL--KKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAA 325 (805)
T ss_pred --CCCEEEEecceeccCCCCceEEEEehhhh-h-hh--cCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHH
Confidence 79999999999999999999999986532 1 11 23333321100 00 0 0000011222222 22 2356
Q ss_pred HHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC------CeEEecCC--------CeeEEEEEecCC
Q 010125 377 LWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK------RFEIVFPC--------HFAVVCFRVSPS 431 (517)
Q Consensus 377 ~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~------~~~l~~~~--------~~~~v~f~~~~~ 431 (517)
+..+++.+-.-|++++.++...+++++.+.|++++ +++++.+. ..++|+|.+...
T Consensus 326 l~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~ 394 (805)
T PLN02724 326 LRHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRA 394 (805)
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcC
Confidence 66777777666788888999999999999999886 57787532 467999998754
No 59
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=1.6e-22 Score=204.96 Aligned_cols=295 Identities=16% Similarity=0.090 Sum_probs=192.6
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH---HHHH
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK---AAQI 211 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k---aa~~ 211 (517)
.+++.+++++++| ++ .+++++|||+++..++.+... +++.|++++++|.++.+ .+++
T Consensus 34 ~~~l~~~~a~~~g-~~--------~~~~~~~gt~a~~~~~~~l~~-----------~gd~v~~~~~~~~~~~~~~~~~~~ 93 (338)
T cd06502 34 TAKLEARAAELFG-KE--------AALFVPSGTAANQLALAAHTQ-----------PGGSVICHETAHIYTDEAGAPEFL 93 (338)
T ss_pred HHHHHHHHHHHhC-CC--------eEEEecCchHHHHHHHHHhcC-----------CCCeEEEecCcceeeecCCcHHHH
Confidence 4455678888888 32 578999999998877765432 55678889999988765 3556
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhc-CCcceEEEeeccCCccc--cccChhHHHHHHHHhCCeEEcccc
Q 010125 212 VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEV-GLIPLFLCATIGTTAIT--AVDPLKPLCDVAKQFGIWVHVDAA 288 (517)
Q Consensus 212 ~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~-g~~p~~vv~t~gtt~~G--~idpl~eI~~i~~~~gi~lhvDaA 288 (517)
.|+ +++.+|.+ ++.+|+++|++++++..++ ...+.+|+++.++++.| ..+++++|+++|++||+++|||+|
T Consensus 94 ~g~---~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea 167 (338)
T cd06502 94 SGV---KLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGA 167 (338)
T ss_pred cCc---eEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechH
Confidence 788 99999875 3689999999999753211 11345788888887633 247788999999999999999999
Q ss_pred cccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccC
Q 010125 289 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITL 368 (517)
Q Consensus 289 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 368 (517)
|..+....... ........+|+++.++|||++.|. |.+++.+++...........+ ..
T Consensus 168 ~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~-------------------~~ 225 (338)
T cd06502 168 RLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQA-------------------GG 225 (338)
T ss_pred HHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHh-------------------CC
Confidence 85443211111 111112378999999999999874 345544554332211100000 00
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccc
Q 010125 369 SRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLS 448 (517)
Q Consensus 369 sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 448 (517)
+.+..++..++++..+...++.+++++..++++++.+.|+++ ++.+ .++..++++++....
T Consensus 226 ~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~v~~~~~----------------- 286 (338)
T cd06502 226 GMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-SEVQTNIVLLDPVEA----------------- 286 (338)
T ss_pred ChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-ccccCCeEEEecCCc-----------------
Confidence 111223344555555555567778889999999999999987 4543 356778888876432
Q ss_pred hHHHHHHHHHHHHHHHH---hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 449 EEEQINEFNRELLESIN---ASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 449 ~~~~~~~~~~~l~~~l~---~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
.....++.+.+. +.|..+ ... .+ .++|+++ +..++++|++++++.+++
T Consensus 287 -----~~~~~~l~~~l~~~~~~gi~~-~~~--~~-~~lRi~~-~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 287 -----NAVFVELSKEAIERRGEGVLF-YAW--GE-GGVRFVT-HWDTTEEDVDELLSALKA 337 (338)
T ss_pred -----cHHHHHHHHHHHHhhhCCEEE-Eec--CC-CeEEEEe-ecCCCHHHHHHHHHHHhc
Confidence 122333444443 567543 222 22 6899998 567788899999998864
No 60
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=6.7e-22 Score=200.77 Aligned_cols=318 Identities=15% Similarity=0.085 Sum_probs=214.6
Q ss_pred hcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEE
Q 010125 116 SGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIV 195 (517)
Q Consensus 116 ~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v 195 (517)
...+.+...|...++..++++.+.+++...+|.+.. ....++++|+|+++..++.+... ++..|
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~-----~~~~~~~~~~t~a~~~~~~~~~~-----------~g~~v 86 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVP-----PEEIVVTNGAQEALSLLLRALLN-----------PGDEV 86 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----cceEEEecCcHHHHHHHHHHhCC-----------CCCEE
Confidence 345556667777788999999999999998876432 13688999999998777665532 45678
Q ss_pred EeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCH--HHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHH
Q 010125 196 YGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSP--DSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLC 273 (517)
Q Consensus 196 ~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~--~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~ 273 (517)
+++..+|.++..+++.+|. +++.+|++.. +.++. +.+++.+.. .+.+|+++.+++++|.+.|++++.
T Consensus 87 l~~~~~~~~~~~~~~~~~~---~~~~i~~~~~--~~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 87 LVPDPTYPGYEAAARLAGA---EVVPVPLDEE--GGFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred EEcCCCchhHHHHHHHCCC---EEEEEecccc--cCCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHH
Confidence 9999999999999999999 9999999753 35544 555554433 245788888999999998866555
Q ss_pred ---HHHHHhCCeEEcccccccccccCccccc-cccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCcccc
Q 010125 274 ---DVAKQFGIWVHVDAAYAGSACICPEFRH-FIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYL 348 (517)
Q Consensus 274 ---~i~~~~gi~lhvDaA~g~~~~~~~~~~~-~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl 348 (517)
++|+++|+|+|+|+||+++......... ...+....|.+..++||+++ .+.++|++++++..... .+.....+.
T Consensus 156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~-~~~~~~~~~ 234 (350)
T cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLE-RLKKLLPYT 234 (350)
T ss_pred HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHH-HHHHHHHhc
Confidence 8999999999999999887643221110 11122357888899999998 56678998887643332 222111110
Q ss_pred CCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEe
Q 010125 349 KNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRV 428 (517)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~ 428 (517)
. ..........++.+++... ++++++.++..++++++.+.|++.+...+..++....+++.+
T Consensus 235 ~-----------------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~ 296 (350)
T cd00609 235 T-----------------SGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL 296 (350)
T ss_pred c-----------------cCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEec
Confidence 0 0011112233444444322 678888899999999999999988655433334444555555
Q ss_pred cCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 429 SPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
... ...+.+.+.+.+.|........+. +..++|+++..+ ++|+++++++|+
T Consensus 297 ~~~-----------------------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~~~al~ 349 (350)
T cd00609 297 PEG-----------------------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEALERLA 349 (350)
T ss_pred CCC-----------------------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHHHHHhh
Confidence 432 012344555666676554443333 567999999654 789999999886
No 61
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.91 E-value=4.7e-22 Score=205.65 Aligned_cols=331 Identities=12% Similarity=0.136 Sum_probs=220.8
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+...+......|...++...+++.+++|+.+.+|.+-+ ....++|+|+++|+..++.+...
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~------- 115 (391)
T PRK08361 48 PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVD-----VDNVIVTAGAYEATYLAFESLLE------- 115 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----cccEEEeCChHHHHHHHHHHhcC-------
Confidence 455666666555444445766678899999999999988775322 12789999999998877665422
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
++..|++.+++|.++...+...|+ +++.+|++.++++.+|+++|++.+++.++ +|+++.++|+||.+
T Consensus 116 ----~g~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~~~------~v~i~~p~NPtG~~ 182 (391)
T PRK08361 116 ----EGDEVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPDELLELITKRTR------MIVINYPNNPTGAT 182 (391)
T ss_pred ----CCCEEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccccE------EEEEeCCCCCCCcC
Confidence 556788889999999999999999 99999998755678999999999876443 67788899999999
Q ss_pred cC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhc
Q 010125 267 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLS 342 (517)
Q Consensus 267 dp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~ 342 (517)
-| +++|+++|++|++++++|++|+.+.................+.++.+++|.++.| ..+|++++.+ .... .+.
T Consensus 183 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~-~~~~-~~~ 260 (391)
T PRK08361 183 LDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPE-QVIK-DMI 260 (391)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCH-HHHH-HHH
Confidence 88 8899999999999999999997664322111111111123457788999999754 4488888743 3322 221
Q ss_pred CCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cH--HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 343 TNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GV--ANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 343 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~--~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
....+... + ...+...++...+ +. +.+++..++..++++.+.+.|++.+++++. +
T Consensus 261 ~~~~~~~~--------------~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-~ 319 (391)
T PRK08361 261 KLHAYIIG--------------N------VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVF-E 319 (391)
T ss_pred HHHhhhcc--------------C------CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeec-C
Confidence 11111100 0 0122233333333 11 346677777788889999999988787765 5
Q ss_pred CCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcH
Q 010125 419 CHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEK 494 (517)
Q Consensus 419 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~ 494 (517)
|+.+.++| ++.+... ...++.+.+. +.|+...++..+. +..++|++++. ++
T Consensus 320 p~g~~~~~~~l~~~~~----------------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~ 374 (391)
T PRK08361 320 PKGAFYVFANIDETGM----------------------SSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYAT---SK 374 (391)
T ss_pred CCEEEEEEEECCCCCC----------------------CHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecC---CH
Confidence 56555444 4432110 1234555554 4576554444332 35799999863 56
Q ss_pred HHHHHHHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQQHLEA 510 (517)
Q Consensus 495 ~di~~l~~~l~~~~~~ 510 (517)
+++++.++.|+++.++
T Consensus 375 ~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 375 EKLIEAMERMEKALEE 390 (391)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 6888888888877654
No 62
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.7e-22 Score=203.90 Aligned_cols=329 Identities=12% Similarity=0.115 Sum_probs=218.8
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+...+......|....+...+++.+++|+.+.+|.+-. ..+.++|+|+++++..++.+..+
T Consensus 39 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~-----~~~i~~t~g~~~al~~~~~~l~~------- 106 (382)
T PRK06108 39 PDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATP-----PERIAVTSSGVQALMLAAQALVG------- 106 (382)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcC-----cceEEEeCChHHHHHHHHHHhcC-------
Confidence 445666666555444445777778899999999999999884322 12689999999998776665432
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~-~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++.+++|..+..+++.+|+ +++.+|.+.+ +++.+|+++|++.++..+ .+|+++.++|+||.
T Consensus 107 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~------~~i~l~~p~NPtG~ 173 (382)
T PRK06108 107 ----PGDEVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITPRT------RALFINSPNNPTGW 173 (382)
T ss_pred ----CCCEEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCccc------eEEEEECCCCCCCc
Confidence 455688888999999999999999 9999999753 357799999999886533 36778889999997
Q ss_pred cc---ChhHHHHHHHHhCCeEEccccccccccc-CccccccccCC--CCCCeeeeccccccC-CCCcceEEEEeCchhHH
Q 010125 266 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACI-CPEFRHFIDGV--EGADSFSLNAHKWFF-ATLDCCCLWVKDPRALV 338 (517)
Q Consensus 266 id---pl~eI~~i~~~~gi~lhvDaA~g~~~~~-~~~~~~~~~g~--~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~ 338 (517)
+- ++++|+++|++||+|+++|++|+.+... .........-. .....+..+++|.++ .+..+|+++.... ..
T Consensus 174 ~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~~-~~- 251 (382)
T PRK06108 174 TASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPA-LG- 251 (382)
T ss_pred ccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCHH-HH-
Confidence 74 5788999999999999999999876543 11111111111 122366778999886 4567899988532 22
Q ss_pred hhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 339 SSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 339 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
+.+.....+.. .+ ...+...++...+ +.+.++++.++..++++++.+.|++++++++.
T Consensus 252 ~~~~~~~~~~~-----------------~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 311 (382)
T PRK06108 252 QVLEKLIEYNT-----------------SC---VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGVEVA 311 (382)
T ss_pred HHHHHHHHhcc-----------------cC---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCCccc
Confidence 22211111110 00 0122222222222 44556788888889999999999888888876
Q ss_pred cCCCeeEE-EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEeEEEEEecCCCC
Q 010125 417 FPCHFAVV-CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVL--GGIYAIRFATGATLT 492 (517)
Q Consensus 417 ~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~t 492 (517)
+|+.+++ .+++.+. .....+.+.|. +.|+...++..+ .+..++|+++..
T Consensus 312 -~p~~g~~~~~~l~~~-----------------------~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--- 364 (382)
T PRK06108 312 -KPDGAMYAFFRIPGV-----------------------TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--- 364 (382)
T ss_pred -CCCeeEEEEEeCCCC-----------------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---
Confidence 4555554 4444322 01245666654 457655444433 235799999953
Q ss_pred cHHHHHHHHHHHHHHHH
Q 010125 493 EKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 493 ~~~di~~l~~~l~~~~~ 509 (517)
++++++++++.|.++.+
T Consensus 365 ~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 365 DPARLDEAVERLRRFLA 381 (382)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 67899999998887643
No 63
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.90 E-value=2.2e-21 Score=200.87 Aligned_cols=300 Identities=12% Similarity=0.079 Sum_probs=197.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
..+..++.+.+++++|.+ .+++++||++|+..++.+..+ +++.|++++..|.++..+++.
T Consensus 82 ~~~~~~le~~ia~~~g~~---------~~ii~~~~~~a~~~~~~~l~~-----------~gd~vi~~~~~~~s~~~~~~~ 141 (393)
T TIGR01822 82 QDIHKELEAKIAAFLGTE---------DTILYASCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRL 141 (393)
T ss_pred hHHHHHHHHHHHHHhCCC---------cEEEECchHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHh
Confidence 344455556777888764 357778889998865544321 567799999999999999988
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccc
Q 010125 212 VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 291 (517)
Q Consensus 212 ~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~ 291 (517)
++. +.+.++ .+|+++|+++|++..+.+.++.+|+.....+++|.+.|+++|+++|++||+|+++|++|+.
T Consensus 142 ~~~---~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~ 211 (393)
T TIGR01822 142 CKA---KRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHAT 211 (393)
T ss_pred cCC---ceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccc
Confidence 887 554442 4799999999987543333456777777889999999999999999999999999999965
Q ss_pred ccccCcccccc--ccCC-CCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCcccc
Q 010125 292 SACICPEFRHF--IDGV-EGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQIT 367 (517)
Q Consensus 292 ~~~~~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~ 367 (517)
+.+.. ..... ..++ .++|.++.++||+++.+ ..|+++.+ +... +.+.. ...|.. .
T Consensus 212 g~~~~-~~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~~-~~~~-~~l~~~~~~~~~-----------------~ 270 (393)
T TIGR01822 212 GFLGP-TGRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTAR-KEVV-ELLRQRSRPYLF-----------------S 270 (393)
T ss_pred cCcCC-CCCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEeC-HHHH-HHHHHhCcccee-----------------c
Confidence 54321 11110 1122 26899999999998754 56877654 3322 22211 111211 1
Q ss_pred CCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccc
Q 010125 368 LSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCL 446 (517)
Q Consensus 368 ~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 446 (517)
++... ...++..+++.+ +..+++.++..++++++.+.|++. ++++. ++..+++.+...+.
T Consensus 271 ~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~~--------------- 331 (393)
T TIGR01822 271 NSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYDA--------------- 331 (393)
T ss_pred CCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCCH---------------
Confidence 11111 112233344433 335567788889999999999875 77764 34445666554321
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 447 LSEEEQINEFNRELLESINASGKAYMTHAVL----GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 447 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
....++.+.|.++|+. +.+..+ .+...+|++++ ..++++||++++++|+++.+++
T Consensus 332 --------~~~~~l~~~L~~~gI~-v~~~~~~~~~~~~~~iRis~~-~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 332 --------VLAQRFARRLLEEGIY-VTGFFYPVVPKGQARIRVQIS-AAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred --------HHHHHHHHHHHHCCee-EeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 2245677788778854 333222 24457999984 6778889999999999886643
No 64
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.90 E-value=2.8e-22 Score=205.85 Aligned_cols=343 Identities=9% Similarity=-0.038 Sum_probs=217.5
Q ss_pred eeCCCCCChHHH-HHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEc-CCchHHHHHHHH
Q 010125 98 AYFPSSGSIAGF-LGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ-GTTCEAILCTLT 175 (517)
Q Consensus 98 ~~~~~~~~~~~~-~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~ 175 (517)
.|.+++...+.. +.+.+...+- .....++...++-+++++.+++++|.++.. ..+|+ ++||+++..++.
T Consensus 15 ~f~~Gp~~~~~~~v~~a~~~~~~---~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~~~~gs~T~~~~~~~~ 85 (378)
T PRK03080 15 RFSSGPCKKRPGWQLEALADALL---GRSHRQKPVKALLKRVIEGTRELLSLPEGY------EVGIVPGSDTGAWEMALW 85 (378)
T ss_pred CcCCCCcCCChHHHHHHHHhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchHHHHHHHHH
Confidence 345555444433 5555543321 111234567888889999999999996532 46666 589988876664
Q ss_pred HHHHHHHHHhcccCCCCeEEEeCCCCchHHHH--HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceE
Q 010125 176 AARDRVLNKIGRENISKLIVYGSDQTHCALQK--AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLF 253 (517)
Q Consensus 176 ~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k--aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~ 253 (517)
.... .++..+++ ...|.+-.. +++..|+ .+++.++.+. +...|+++++. ++ .
T Consensus 86 ~l~~----------~~~~~vi~-~g~f~~~~~~~~~~~~g~--~~v~~~~~~~--g~~~d~~~i~~-----~~------~ 139 (378)
T PRK03080 86 SLLG----------ARRVDHLA-WESFGSKWATDVVKQLKL--EDPRVLEADY--GSLPDLSAVDF-----DR------D 139 (378)
T ss_pred hcCC----------CCcceEEE-eCHHHHHHHHHHHhhcCC--CCceEeccCC--CCCCCHhhcCC-----CC------C
Confidence 4311 02334444 457766443 3345565 2677787764 34778776432 21 5
Q ss_pred EEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeC
Q 010125 254 LCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKD 333 (517)
Q Consensus 254 vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~ 333 (517)
|++++.+|.+|.+.|+++|++ ++||++++||++++.+....+- ..+|++.++.||||+.|.|+|++++++
T Consensus 140 V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv--------~~iD~~~~s~~K~l~~P~G~g~l~v~~ 209 (378)
T PRK03080 140 VVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDW--------SKLDVYTFSWQKVLGGEGGHGMAILSP 209 (378)
T ss_pred EEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCH--------HHCcEEEEehhhhCCCCCceEEEEECH
Confidence 889999999999999999999 8899999999999988876642 147999999999999999999999986
Q ss_pred chhHHhhhcCC-----ccccCCccccccccccCCCccccCCCCC--C---chHHHHHHHHhcHH-HHHHHHHHHHHHHHH
Q 010125 334 PRALVSSLSTN-----PEYLKNKATESMQVVDYKDWQITLSRRF--R---SLKLWFVIRNYGVA-NLRHFLRSHVNMAKL 402 (517)
Q Consensus 334 ~~~~~~~~~~~-----~~yl~~~~~~~~~~~~~~~~~~~~sr~~--~---al~~~~~l~~~g~~-g~~~~i~~~~~~a~~ 402 (517)
+.. .+.-... +.|+.-.. .........+.+... . ...+..+++.+-.. |++++.+++.+++++
T Consensus 210 ~~~-~~~~p~~~~~~~~~~~~~~~-----~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~ 283 (378)
T PRK03080 210 RAV-ERLESYTPARPIPKFFRLTK-----GGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASV 283 (378)
T ss_pred HHH-HhhhcccCCCCCchhheecc-----chHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 543 2111111 11211000 000000011111111 1 12345677877776 899999999999999
Q ss_pred HHHHHhcCCCeEEecC-C--Ce-eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC
Q 010125 403 FERLVSGDKRFEIVFP-C--HF-AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG 478 (517)
Q Consensus 403 l~~~l~~~~~~~l~~~-~--~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 478 (517)
+++.|++.++++++.+ + .. .+++|++.... .....++..++.++|.+...+....
T Consensus 284 l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~---------------------~~~~~~~~~~l~~~~i~v~~g~~~~ 342 (378)
T PRK03080 284 LYDWAEKTPWATPLVADPATRSNTSVTLDFVDAQ---------------------AAVDAAAVAKLLRENGAVDIEPYRD 342 (378)
T ss_pred HHHHHHhCCCcccccCCccccCccEEEEEcCCch---------------------HHHHHHHHHHHHHcCCeeccccccC
Confidence 9999999977777632 2 23 47888765310 0112334455555565432221111
Q ss_pred CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 479 GIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 479 g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
....+|+|++ .+++++||++++++|+++.++++.
T Consensus 343 ~~~~vRis~~-~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 343 APNGLRIWCG-PTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CCCcEEEecC-CCCCHHHHHHHHHHHHHHHHHHhh
Confidence 2357999974 688889999999999998877664
No 65
>PRK07179 hypothetical protein; Provisional
Probab=99.90 E-value=1.8e-21 Score=202.37 Aligned_cols=292 Identities=12% Similarity=0.098 Sum_probs=195.8
Q ss_pred hhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHH
Q 010125 129 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKA 208 (517)
Q Consensus 129 p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ka 208 (517)
+...++| +.+++++|.+ ..++++||++||..++.+... ++..|+++...|.|+...
T Consensus 99 ~~~~~le----~~la~~~g~~---------~~~~~~sG~~An~~~l~~l~~-----------~g~~v~~~~~~h~s~~~~ 154 (407)
T PRK07179 99 SPKPQFE----KKLAAFTGFE---------SCLLCQSGWAANVGLLQTIAD-----------PNTPVYIDFFAHMSLWEG 154 (407)
T ss_pred hHHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHhCC-----------CCCEEEEECCcCHHHHHH
Confidence 3455555 4566767764 358899999999888776532 445688899999999999
Q ss_pred HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccc
Q 010125 209 AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 288 (517)
Q Consensus 209 a~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA 288 (517)
++..|+ +++.++ ..|+++|++++++.. +.+|++...++++|.+.|+++|.++|++||+++|+|++
T Consensus 155 ~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~-----~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea 219 (407)
T PRK07179 155 VRAAGA---QAHPFR-------HNDVDHLRRQIERHG-----PGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDES 219 (407)
T ss_pred HHHCCC---eEEEec-------CCCHHHHHHHHHhcC-----CeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECc
Confidence 888888 665543 358999999997531 34788888999999999999999999999999999999
Q ss_pred cccccccCcccccccc--CC-CCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCc
Q 010125 289 YAGSACICPEFRHFID--GV-EGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDW 364 (517)
Q Consensus 289 ~g~~~~~~~~~~~~~~--g~-~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~ 364 (517)
|+.+... +.....+. ++ ..+|+++.++||+++. .+|++++++. . .+.+.. ..+++..
T Consensus 220 ~~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~~-~-~~~~~~~~~~~~~~-------------- 280 (407)
T PRK07179 220 HSLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAG--RAGIITCPRE-L-AEYVPFVSYPAIFS-------------- 280 (407)
T ss_pred ccccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhc--cCeEEEeCHH-H-HHHHHHhCcCeeeC--------------
Confidence 9755431 11111111 22 3579999999999975 3888887543 2 222211 1111110
Q ss_pred cccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhh
Q 010125 365 QITLSRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYV 443 (517)
Q Consensus 365 ~~~~sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 443 (517)
++.. .....+.++++.+ +...++.++..+++++|++.|+++ ++++. ...+++.+.+...
T Consensus 281 ---~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~v~--~~~~i~~l~~~~~------------ 340 (407)
T PRK07179 281 ---STLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYNIR--SESQIIALETGSE------------ 340 (407)
T ss_pred ---CCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC--CCCCEEEEEeCCH------------
Confidence 1111 1112233445443 222457788899999999999987 77765 3346676665321
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcE---EEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 444 NCLLSEEEQINEFNRELLESINASGKA---YMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 444 ~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.....+.+.|.++|+. +..+....+..++|++++ ..++++||++++++|+++.++
T Consensus 341 -----------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~-~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 341 -----------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLN-ADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred -----------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHh
Confidence 1235667777788874 222222234578999995 567888999999999887665
No 66
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.90 E-value=1.6e-21 Score=196.09 Aligned_cols=337 Identities=15% Similarity=0.123 Sum_probs=228.1
Q ss_pred CCCCCCCCccceeCCCCCChHHHHHHHHHhc-ccc--cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEc
Q 010125 87 GITHWQSPNYFAYFPSSGSIAGFLGEMLSSG-FNI--VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ 163 (517)
Q Consensus 87 ~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~--~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t 163 (517)
..+.|.+-.|+|.-..+. ....+.+.+... ... .-......+...+||++ +++++|.+ ..++.
T Consensus 40 ~~~nf~SNdYLGLa~~~~-~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~----lA~f~g~e---------~al~f 105 (388)
T COG0156 40 KVLNFCSNDYLGLASHPE-LIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEE----LADFLGAE---------AALLF 105 (388)
T ss_pred eeEeeeccCcccccCCHH-HHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHH----HHHHhCCC---------cEEEE
Confidence 345667777888764322 222222222221 111 11123334455566655 66666766 35677
Q ss_pred CCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH
Q 010125 164 GTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINS 243 (517)
Q Consensus 164 ~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~ 243 (517)
++|-.||+.++.+... ++++|+..+..|.|+..++++.+. +++..+. .|+++||+.+++
T Consensus 106 ~SGy~AN~~~i~~l~~-----------~~dli~~D~lnHASiidG~rls~a---~~~~f~H-------nD~~~Le~~l~~ 164 (388)
T COG0156 106 SSGFVANLGLLSALLK-----------KGDLIFSDELNHASIIDGIRLSRA---EVRRFKH-------NDLDHLEALLEE 164 (388)
T ss_pred cccchhHHHHHHHhcC-----------CCcEEEEechhhhhHHHHHHhCCC---cEEEecC-------CCHHHHHHHHHh
Confidence 7778899766655432 578899999999999999999999 8888875 489999999998
Q ss_pred hHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCcccccccc--CC--CCCCeeeeccccc
Q 010125 244 DVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GV--EGADSFSLNAHKW 319 (517)
Q Consensus 244 ~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~--g~--~~aDsi~~~~hK~ 319 (517)
....+.++.+|+.....++.|.+.||++|+++|++||+|+.||.||+.+.+- +..+.... |+ ..+|+++.++.|.
T Consensus 165 ~~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G-~~GrG~~e~~g~~~~~vdi~~gTlsKA 243 (388)
T COG0156 165 ARENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLG-PNGRGLAEHFGLEPEEVDIIVGTLGKA 243 (388)
T ss_pred hhccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEccccccccC-CCCccHHHHhCCCCccceEEEEEchhh
Confidence 6544335667888888999999999999999999999999999999888753 33333322 33 3468999999999
Q ss_pred cCCCCcceEEEEeCchhHHhhh-cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHH
Q 010125 320 FFATLDCCCLWVKDPRALVSSL-STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVN 398 (517)
Q Consensus 320 l~~p~~~g~l~~~~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~ 398 (517)
|++ .|.++..+... .+.+ ....+|++.... .+..+.+.-.+++.+ +...++.++..+
T Consensus 244 lGs---~Gg~v~g~~~~-~d~L~~~ar~~ifStal----------------pP~~aaa~~~al~~l--~~~~~~r~~L~~ 301 (388)
T COG0156 244 LGS---SGGYIAGSAAL-IDYLRNRARPFIFSTAL----------------PPAVAAAALAALRIL--EEGPERRERLQE 301 (388)
T ss_pred hcc---cCceeeCcHHH-HHHHHHhCCceeccCCC----------------CHHHHHHHHHHHHHH--HhCHHHHHHHHH
Confidence 984 56666555543 3333 334566654321 112233444555554 344677888889
Q ss_pred HHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcE---EEeee
Q 010125 399 MAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKA---YMTHA 475 (517)
Q Consensus 399 ~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~ 475 (517)
++.+++..++.. ++.+ .+..+.++.+.+.+. ....++.+.|.++|+. +..|+
T Consensus 302 ~~~~~~~~~~~~-~~~~-~~s~s~I~pv~~gd~-----------------------~~a~~~s~~l~~~Gi~v~~i~~PT 356 (388)
T COG0156 302 LAAFFRSLLKAL-GLVL-LPSESPIIPVILGDE-----------------------ERALEASRALLEEGIYVSAIRPPT 356 (388)
T ss_pred HHHHHHHHHHhc-CCcc-CCCCCCeeeeEeCCH-----------------------HHHHHHHHHHHHCCeeEeeecCCC
Confidence 999999777664 6654 356677887777543 3356677777777763 34566
Q ss_pred eECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 476 VLGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 476 ~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
+..|...||+|++. ..+++||+++++.+.++
T Consensus 357 Vp~gtarlRi~lta-~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 357 VPKGTARLRITLTA-AHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCcceEEEEecC-CCCHHHHHHHHHHHHhh
Confidence 77888999999964 55777999999998765
No 67
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.90 E-value=3.1e-21 Score=199.78 Aligned_cols=334 Identities=13% Similarity=0.072 Sum_probs=221.5
Q ss_pred HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 108 GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 108 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
..+.+.+...+......|....+...+++.+++|+.+..|..-. ....++|+|+++|+..++.+..+
T Consensus 47 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~a~~~~~~~~~~-------- 113 (393)
T PRK05764 47 EHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYD-----PSQVIVTTGAKQALYNAFMALLD-------- 113 (393)
T ss_pred HHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCC-----HHHEEEeCCcHHHHHHHHHHhcC--------
Confidence 45666666655444445776777899999999999888765321 12689999999998776665432
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD 267 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id 267 (517)
++..|++++++|..+..+++..|+ +++.+|+++++++.+|+++|++++++.+ .+|+++.++|++|.+-
T Consensus 114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~------~~v~~~~p~NPtG~~~ 181 (393)
T PRK05764 114 ---PGDEVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITPKT------KALILNSPSNPTGAVY 181 (393)
T ss_pred ---CCCEEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCccc------eEEEEECCCCCCCccc
Confidence 455688899999999999999999 9999999865567899999999986543 2677888999999984
Q ss_pred ---ChhHHHHHHHHhCCeEEcccccccccccCcc---ccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhh
Q 010125 268 ---PLKPLCDVAKQFGIWVHVDAAYAGSACICPE---FRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSS 340 (517)
Q Consensus 268 ---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~---~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~ 340 (517)
++++|+++|++||+|+++|.+|+.+.+.... ...........+.+..+++|.++.| ..+|+++.. +.... .
T Consensus 182 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~~-~~~~~-~ 259 (393)
T PRK05764 182 SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAGP-KELIK-A 259 (393)
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEecC-HHHHH-H
Confidence 5889999999999999999999765432111 1111112223456777899999744 457877743 33222 2
Q ss_pred hcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 341 LSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG--VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 341 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
+.. +... .+.....+..+++.+.+. .+.+.+..++..++++++.+.|++++++++. .
T Consensus 260 ~~~---~~~~-----------------~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~ 318 (393)
T PRK05764 260 MSK---LQSH-----------------STSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECP-K 318 (393)
T ss_pred HHH---HHhh-----------------cccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCccc-C
Confidence 211 0000 000113344455555542 4556667777788899999999988888875 4
Q ss_pred CCeeEE-EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHH
Q 010125 419 CHFAVV-CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFATGATLTEKRH 496 (517)
Q Consensus 419 ~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 496 (517)
|..+.+ .+.+.+... . ......++.+.+. +.|+.+.++..+....++|++++. ++++
T Consensus 319 ~~g~~~~~~~~~~~~~---------------~---~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~---~~~~ 377 (393)
T PRK05764 319 PEGAFYVFPNVSKLLG---------------K---SITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYAT---SLED 377 (393)
T ss_pred CCcceEEEEecccccc---------------c---ccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecC---CHHH
Confidence 554443 334432100 0 0001245566654 457665555444445789999863 5789
Q ss_pred HHHHHHHHHHHHHH
Q 010125 497 VVVAWTVVQQHLEA 510 (517)
Q Consensus 497 i~~l~~~l~~~~~~ 510 (517)
+++++++|.++.++
T Consensus 378 ~~~~i~~l~~~~~~ 391 (393)
T PRK05764 378 LEEGLERIERFLES 391 (393)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999887664
No 68
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.89 E-value=1.6e-20 Score=191.16 Aligned_cols=299 Identities=10% Similarity=0.001 Sum_probs=195.5
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
......++.+++++++|.+ ..+++++||++++.++.+... +++.|++++..|.++..+++
T Consensus 44 ~~~~~~~l~~~la~~~~~~---------~~iv~~sg~~a~~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~ 103 (349)
T cd06454 44 TSDLHEELEEELAEFHGKE---------AALVFSSGYAANDGVLSTLAG-----------KGDLIISDSLNHASIIDGIR 103 (349)
T ss_pred CchHHHHHHHHHHHHhCCC---------CEEEeccHHHHHHHHHHHhcC-----------CCCEEEEehhhhHHHHHHHH
Confidence 3445556667788888865 246777788888877655432 55678889999999999999
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccc
Q 010125 211 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 290 (517)
Q Consensus 211 ~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g 290 (517)
..|+ +++.++ .+|.+.+++++++.. ...++.+|+++.+++++|.+.|+++|+++|++||+++++|++|+
T Consensus 104 ~~g~---~~~~~~-------~~~~~~le~~i~~~~-~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~ 172 (349)
T cd06454 104 LSGA---KKRIFK-------HNDMEDLEKLLREAR-RPYGKKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHS 172 (349)
T ss_pred HcCC---ceEEec-------CCCHHHHHHHHHHhh-ccCCCeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEcccc
Confidence 9998 888775 247889999987643 12345688888899999999999999999999999999999997
Q ss_pred cccccCcc-cccccc-CCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccC
Q 010125 291 GSACICPE-FRHFID-GVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITL 368 (517)
Q Consensus 291 ~~~~~~~~-~~~~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 368 (517)
.+.+.... ...... ...++|+++.++||+++.+ + |+++.+ +............+.. ..
T Consensus 173 ~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g-G~i~~~-~~~~~~~~~~~~~~~~-----------------~~ 232 (349)
T cd06454 173 VGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAV-G-GYIAGS-KELIDYLRSYARGFIF-----------------ST 232 (349)
T ss_pred ccccCCCCCChhhhccccccCcEEEeechhhhccc-C-CEEECC-HHHHHHHHHhchhhhc-----------------cC
Confidence 54432110 000111 1236899999999999863 2 655543 3332221111111110 01
Q ss_pred CCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhcccc
Q 010125 369 SRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLL 447 (517)
Q Consensus 369 sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 447 (517)
+.. .....+..+++.... +.++.++..++++++.+.|++. +++++.++...++++...+.
T Consensus 233 ~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~~~~~~---------------- 293 (349)
T cd06454 233 SLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVGGSPSHIIPPLIGDDP---------------- 293 (349)
T ss_pred CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCcccCCCCCcEEEEeCCCh----------------
Confidence 111 112234444544322 4567788889999999999886 77766544444444433211
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeee---ECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 448 SEEEQINEFNRELLESINASGKAYMTHAV---LGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 448 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
....++.+.|.++|+....... ..+..++|+++. ...+++|+++++++|+++
T Consensus 294 -------~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 294 -------AKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLS-AAHTKEDIDRLLEALKEV 348 (349)
T ss_pred -------HHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEe-CCCCHHHHHHHHHHHHHh
Confidence 2246778888888875433211 112468999984 567888999999999875
No 69
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.89 E-value=5.1e-20 Score=195.13 Aligned_cols=339 Identities=13% Similarity=0.100 Sum_probs=220.5
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC
Q 010125 122 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT 201 (517)
Q Consensus 122 ~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~ 201 (517)
...|....+..++.+.+++|+.+..|++.+ ...+++|+|+++|+..++.+.... +++.|++..++
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-----~~~I~it~Ga~~al~~~~~~l~~~----------~gD~Vlv~~P~ 172 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKD-----PSDIFLTDGASSGIKLLLQLLIGD----------PSDGVMIPIPQ 172 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcCCCCC-----hhhEEEcCCHHHHHHHHHHHhccC----------CCCEEEECCCC
Confidence 456777778999999999999988786533 137899999999988777665311 56779999999
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHH
Q 010125 202 HCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQ 278 (517)
Q Consensus 202 H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~ 278 (517)
|..+..+++..|. +++.||+++++++.+|+++|++++++..+++..+.+|+++.++||||.+-+ +++|+++|++
T Consensus 173 y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~ 249 (481)
T PTZ00377 173 YPLYSAAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE 249 (481)
T ss_pred chhHHHHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 999999986556899999999999865444444556777789999999977 8899999999
Q ss_pred hCCeEEcccccccccccC-ccccc---cccCCCC-----CCeee-ecccccc-C-CCCcceEEEEe--CchhHHhhhcC-
Q 010125 279 FGIWVHVDAAYAGSACIC-PEFRH---FIDGVEG-----ADSFS-LNAHKWF-F-ATLDCCCLWVK--DPRALVSSLST- 343 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~-~~~~~---~~~g~~~-----aDsi~-~~~hK~l-~-~p~~~g~l~~~--~~~~~~~~~~~- 343 (517)
||+|+++|.+|+...+.. ..+.. ...++.. ...++ -++.|.+ + ..+.+|++.+. +++.. +.+..
T Consensus 250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li-~~l~~~ 328 (481)
T PTZ00377 250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVR-EQIYKL 328 (481)
T ss_pred CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHH-HHHHHH
Confidence 999999999997654311 11111 1111111 12344 4699975 4 56889998763 33332 22211
Q ss_pred CccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh-----cHH---HH----HHHHHHHHHHHHHHHHHHhcCC
Q 010125 344 NPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY-----GVA---NL----RHFLRSHVNMAKLFERLVSGDK 411 (517)
Q Consensus 344 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~---g~----~~~i~~~~~~a~~l~~~l~~~~ 411 (517)
...++ + ...+...++...+ +.. .+ ++..++..++++.+.+.|++++
T Consensus 329 ~~~~~-------------------~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~ 386 (481)
T PTZ00377 329 ASINL-------------------C---SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIE 386 (481)
T ss_pred hheec-------------------C---CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 10010 0 0122223333222 111 12 2222345677888899999888
Q ss_pred CeEEecCCCeeEEEE-Eec-CCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC---CEeEEEEE
Q 010125 412 RFEIVFPCHFAVVCF-RVS-PSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG---GIYAIRFA 486 (517)
Q Consensus 412 ~~~l~~~~~~~~v~f-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lR~~ 486 (517)
++++. +|+.+++.| ++. +...... . ...........+...+.+.|+.++++..+. +..++|++
T Consensus 387 g~~~~-~p~gg~fl~~~~~l~~~~~~~------~-----~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls 454 (481)
T PTZ00377 387 GVSCQ-PVEGAMYAFPRIELPEKAIQE------A-----KERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRIT 454 (481)
T ss_pred CcEee-cCCeeEEEEeeccCchhhHHH------H-----HhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEE
Confidence 88875 566666655 332 2110000 0 000000011122344556787777666554 34689999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHHHHhhcC
Q 010125 487 TGATLTEKRHVVVAWTVVQQHLEAFQSAFK 516 (517)
Q Consensus 487 ~~~~~t~~~di~~l~~~l~~~~~~l~~~~~ 516 (517)
+. ++++++++++++|.++.++..++|+
T Consensus 455 ~~---~~~e~l~~~l~rl~~~~~~~~~~~~ 481 (481)
T PTZ00377 455 IL---PPEEQIEEMVKKIKEFHESFMKKYG 481 (481)
T ss_pred EC---CCHHHHHHHHHHHHHHHHHHHHhhC
Confidence 85 4678999999999999998888764
No 70
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.88 E-value=1.4e-20 Score=192.05 Aligned_cols=319 Identities=14% Similarity=0.107 Sum_probs=199.1
Q ss_pred CChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 104 GSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 104 ~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
+.+|..+.+.+..+.+. |. ....+.+++.+++++++|.+ .+++|+|+|+|+..++.+....
T Consensus 23 s~~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~~---------~~~~~~g~t~al~~al~al~~~--- 83 (363)
T TIGR01437 23 STVSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGVE---------DAVIVSSASAGIAQSVAAVITR--- 83 (363)
T ss_pred CCCCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCCC---------eEEEEcCHHHHHHHHHHHHhcC---
Confidence 34556666666555432 21 24567788899999999975 4699999999999888876432
Q ss_pred Hhccc---------CCCCeEEEeCCCCchH-----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCC
Q 010125 184 KIGRE---------NISKLIVYGSDQTHCA-----LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGL 249 (517)
Q Consensus 184 ~~g~~---------~~~~~~v~~s~~~H~s-----~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~ 249 (517)
|++ ..++..|+++. .|+. +..++.+.|+ +++.++++ +.+|+++|+++|+++++
T Consensus 84 --Gd~~~~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~---~~v~v~~~----~~~d~~~le~ai~~~t~--- 150 (363)
T TIGR01437 84 --GNRYLVENLHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGG---KVVEAGYA----NECSAEQLEAAITEKTA--- 150 (363)
T ss_pred --CCcchhhcccccccccceEEEEC-ccchhcCCchHHHHHhcCC---eEEEEcCC----CCCCHHHHHHhcChhce---
Confidence 210 01223566665 4443 3456778898 88888763 47999999999988764
Q ss_pred cceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEE
Q 010125 250 IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 329 (517)
Q Consensus 250 ~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l 329 (517)
.++.++.+++++|.+.|+++|+++|++||+++|+|+||+... ..... + ++|.+++++||++.+|. .|++
T Consensus 151 --ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~---~~~~~----~-g~D~~~~S~~K~l~gp~-~G~l 219 (363)
T TIGR01437 151 --AILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL---QKYYR----L-GADLVIYSGAKAIEGPT-SGLV 219 (363)
T ss_pred --EEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch---HHHHH----c-CCCEEEEeCCcccCCCc-eEEE
Confidence 244456667789999999999999999999999999996211 11011 1 58999999999999886 7877
Q ss_pred EEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010125 330 WVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG 409 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~ 409 (517)
+.+ +..+.. ... +..... . .++.+. ...+.+..++..+-..+ .+.++...++++++.+.|++
T Consensus 220 ~~~-~~~i~~-~~~---~~~~~~----~-------~~~~~~-~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~ 281 (363)
T TIGR01437 220 LGK-KKYIEW-VKL---QSKGIG----R-------AMKVGK-ENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNT 281 (363)
T ss_pred EEc-HHHHHH-HHh---ccCCCc----c-------eeccCH-HHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhc
Confidence 754 333321 110 110000 0 000000 11245555665543222 23344445567789999999
Q ss_pred CCCeEEecCCC-------eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeE
Q 010125 410 DKRFEIVFPCH-------FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYA 482 (517)
Q Consensus 410 ~~~~~l~~~~~-------~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 482 (517)
+|++++..++. ...+.|.....+ ....++.+.|.+.+.-............
T Consensus 282 i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g----------------------~~~~~l~~~L~~~~~~I~~r~~~~~~~~ 339 (363)
T TIGR01437 282 LKGVSASIVQDEAGRDIARAEIRFDESELG----------------------MTAADVVQALRQGEPAIYTRGYKANEGI 339 (363)
T ss_pred CCCeEEEEecCCCCCcCceEEEEEeccCCC----------------------CCHHHHHHHHhcCCCCEEEeeeeecCCe
Confidence 99998874221 123444432111 1235677777666642223322333456
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 483 IRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 483 lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
+|+... ..+++|++.++++|.++
T Consensus 340 ~~l~~~--~~~~~e~~~~~~~l~~~ 362 (363)
T TIGR01437 340 IEIDPR--SVTGGQLDIIVERIREI 362 (363)
T ss_pred EEEEee--cCCHHHHHHHHHHHHHh
Confidence 777774 34588999999999875
No 71
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.88 E-value=3.3e-20 Score=192.44 Aligned_cols=331 Identities=12% Similarity=0.102 Sum_probs=216.4
Q ss_pred HHHHHHHhcccc-cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 109 FLGEMLSSGFNI-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 109 ~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
.+.+.+...++. ....|....+...+.+.+++|+++.+|.+... ....++|+|+++++..++.+..+
T Consensus 57 ~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~----~~~I~it~Ga~~al~~~~~~l~~-------- 124 (405)
T PRK06207 57 GAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDA----ADELIITPGTQGALFLAVAATVA-------- 124 (405)
T ss_pred HHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCcHHHHHHHHHHhcC--------
Confidence 444444444433 23457666778899999999999999964220 02689999999998776665432
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecC---CCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTT---KSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d---~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
+++.|++.+++|..+...++.+|. +++.||++ .++++.+|+++|++++++.++ +|+++.++|+||
T Consensus 125 ---~Gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k------~v~l~~P~NPTG 192 (405)
T PRK06207 125 ---RGDKVAIVQPDYFANRKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKAGVR------VFLFSNPNNPAG 192 (405)
T ss_pred ---CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhhcCe------EEEECCCCCCCC
Confidence 567788888999999999999999 99999986 223578999999999876443 788899999999
Q ss_pred cccC---hhHHHHHHHHhCCeEEcccccccccccCcccccccc-CCCCCC-eeeeccccccC-CCCcceEEEEeCchhHH
Q 010125 265 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVEGAD-SFSLNAHKWFF-ATLDCCCLWVKDPRALV 338 (517)
Q Consensus 265 ~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~-g~~~aD-si~~~~hK~l~-~p~~~g~l~~~~~~~~~ 338 (517)
.+-+ +++|+++|++||+|+++|.+|+.+.+.......... ....-. .++.+++|.++ ....+|+++.. +...
T Consensus 193 ~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~-~~l~- 270 (405)
T PRK06207 193 VVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGS-PAII- 270 (405)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcC-HHHH-
Confidence 9976 778899999999999999999766532211111111 011112 46667999998 44668988753 3322
Q ss_pred hhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 339 SSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 339 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
+.+.....+.. +. ...+...++...+ +...+++++++..+.++.+.+.|++.+++++.
T Consensus 271 ~~~~~~~~~~~----------------~~----~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 330 (405)
T PRK06207 271 DRMEKLQAIVS----------------LR----AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFVR 330 (405)
T ss_pred HHHHHHHhHhc----------------cC----CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 22221111110 00 0111222222223 33446777888888889999999888788765
Q ss_pred cCCCee-EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCC
Q 010125 417 FPCHFA-VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLT 492 (517)
Q Consensus 417 ~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t 492 (517)
+|+.+ .+.+++.+... ....+.+.|. +.|+.+.++..+. +..++|++++.
T Consensus 331 -~p~gg~fl~~~l~~~~~----------------------~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~--- 384 (405)
T PRK06207 331 -APQAGSYLFPRLPRLAV----------------------SLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQ--- 384 (405)
T ss_pred -CCCeeEEEEEeCcccCC----------------------CHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecC---
Confidence 45444 44444432110 1234666665 5687666555442 35799999963
Q ss_pred cHHHHHHHHHHHHHHHHHH
Q 010125 493 EKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 493 ~~~di~~l~~~l~~~~~~l 511 (517)
+.+++++.+++|.++.++.
T Consensus 385 ~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 385 DHAAAVAAAERIAQLIERY 403 (405)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 5678999999888877654
No 72
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=1.1e-21 Score=182.56 Aligned_cols=309 Identities=16% Similarity=0.163 Sum_probs=206.4
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC
Q 010125 122 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT 201 (517)
Q Consensus 122 ~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~ 201 (517)
...|...|.+..||+++++.+++ + .|+|+++||++|+.|++...+. ++..|++.+.+
T Consensus 49 DdVyGeD~tt~rLE~~vA~l~GK----E---------AgLFv~SGTmgNllaIm~Hc~~----------rg~eii~gd~~ 105 (384)
T KOG1368|consen 49 DDVYGEDPTTNRLEQRVAELFGK----E---------AGLFVPSGTMGNLLAIMVHCHQ----------RGSEIIVGDRA 105 (384)
T ss_pred cccccCCccHHHHHHHHHHHhCc----c---------ceeeecccccccHHHHHHHhcC----------CCceEEeccch
Confidence 45888899999999886655444 2 6899999999999999998775 66779999999
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhH-hcCCcc-eEEEeeccCCccc-cccCh---hHHHHH
Q 010125 202 HCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDV-EVGLIP-LFLCATIGTTAIT-AVDPL---KPLCDV 275 (517)
Q Consensus 202 H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~-~~g~~p-~~vv~t~gtt~~G-~idpl---~eI~~i 275 (517)
|.-.+++..+.-++...++.|... +++.|+++++|++|.... .-...| .+|++..-.+.+| .+-|| ++|.++
T Consensus 106 HI~~~E~gg~s~l~gv~~~tv~~e--~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~l 183 (384)
T KOG1368|consen 106 HIHRYEQGGISQLAGVHVRTVKNE--NDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKAL 183 (384)
T ss_pred heeehhccChhhhccceeEeeeeC--CCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHH
Confidence 976665544333332277777654 467999999999998543 112223 3666665555556 66665 566778
Q ss_pred HHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccc
Q 010125 276 AKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATES 355 (517)
Q Consensus 276 ~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 355 (517)
|++||+.||+|||.-..+..... -+.-.-.+.+||+++.++|.+++|.| -+++.++....++ .+++
T Consensus 184 ak~~glkLH~DGARi~NAavasg-V~vk~i~~~fDSVsiCLSKglgAPVG--SViVG~k~FI~kA-----~~~R------ 249 (384)
T KOG1368|consen 184 AKRHGLKLHMDGARIFNAAVASG-VPVKKICSAFDSVSICLSKGLGAPVG--SVIVGSKDFIDKA-----RHFR------ 249 (384)
T ss_pred HhccCCeeecchhhhhhHHHHcC-CCHHHHHHhhhhhhhhhhccCCCCcc--cEEEccHHHHHHH-----HHHH------
Confidence 99999999999986332221100 00001124799999999999999954 4555555444332 2222
Q ss_pred cccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEecCCCcc
Q 010125 356 MQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP-CHFAVVCFRVSPSPVL 434 (517)
Q Consensus 356 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~ 434 (517)
+.+.++.|-...-..+++-.+ .+.+. .+++.++.|+.+++.+++.+++++-.+ .++|++...+...+
T Consensus 250 --------KalGGGmRQsGvLaaaaLval-~~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~-- 317 (384)
T KOG1368|consen 250 --------KALGGGMRQSGVLAAAALVAL-DENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQAR-- 317 (384)
T ss_pred --------HHhcCchhHHHHHHHHHHHHh-hcchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeeccccc--
Confidence 123344332222222233322 23333 677888899999999998877887444 67888776664432
Q ss_pred hhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 435 MDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
...+.|.+.+.+.|+..+.... ..+|+++ +++.+.++++.++..+++
T Consensus 318 --------------------~~~~~l~~~~~k~gi~lm~~~s----~r~Rivl-h~Qvt~~~ve~~~~~~~k 364 (384)
T KOG1368|consen 318 --------------------LTAEELCKFLEKNGILLMGGAS----RRIRIVL-HHQVTDEDVEYVKSVLSK 364 (384)
T ss_pred --------------------CCHHHHHHHHHHCCeEEeeccc----cceEEEE-EEecCHHHHHHHHHHHHH
Confidence 2246778888889987766543 3489998 788999999999999953
No 73
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=9.2e-21 Score=194.94 Aligned_cols=326 Identities=13% Similarity=0.066 Sum_probs=209.8
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHH-----HHHhc-----------cc
Q 010125 125 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRV-----LNKIG-----------RE 188 (517)
Q Consensus 125 ~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~-----~~~~g-----------~~ 188 (517)
|.......++|..+.+...++||.+.. -+=.-+|+.||+.+..+..... +.+.| |+
T Consensus 87 y~g~~~~d~ie~l~~~ra~~lf~a~~a--------nvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~ 158 (493)
T PRK13580 87 YAGCQNVDTVEWEAAEHAKELFGAEHA--------YVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWE 158 (493)
T ss_pred cCCCchHHHHHHHHHHHHHHHhCCCcc--------cccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhh
Confidence 344556789999999999999998754 2445678999988877765421 11111 00
Q ss_pred C----CCCeEEE---eCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCC
Q 010125 189 N----ISKLIVY---GSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTT 261 (517)
Q Consensus 189 ~----~~~~~v~---~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt 261 (517)
. ..++.|+ .+.-.|.+......+.|... .++..++++ .++.+|.+++++.+++.+ | .|++++.++
T Consensus 159 ~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~-~~~~y~vd~-~~g~iD~d~l~~~~~~~~-----p-lvii~g~S~ 230 (493)
T PRK13580 159 ALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMF-HQRSYGVDP-DTGLLDYDEIAALAREFK-----P-LILVAGYSA 230 (493)
T ss_pred hhhccCCCCEEEeecCCCCCeeecCcccchhhhee-eeEecccCc-ccCccCHHHHHHHHhhcC-----C-EEEEeCccc
Confidence 0 0123333 22335555433334444311 566677774 357999999999998765 3 466666666
Q ss_pred ccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhh
Q 010125 262 AITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSL 341 (517)
Q Consensus 262 ~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~ 341 (517)
. |.+.|+++|+++|++||++++||+||+.+.+....+........++|++++++||+|.+|.| |++++++. +.+.+
T Consensus 231 ~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~--l~~~L 306 (493)
T PRK13580 231 Y-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE--YADAV 306 (493)
T ss_pred c-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH--HHHHH
Confidence 6 55779999999999999999999999998876433221112245899999999999988874 77777644 22223
Q ss_pred cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCC
Q 010125 342 STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF-PCH 420 (517)
Q Consensus 342 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~-~~~ 420 (517)
....+|+.+.. -.....+...+++......++++.++..+++++|++.|.+. ||.++. ..+
T Consensus 307 ~~a~P~i~gg~-----------------l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTd 368 (493)
T PRK13580 307 DKGCPLVLGGP-----------------LPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTD 368 (493)
T ss_pred hhCCCcccCCC-----------------ccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCC
Confidence 22224554321 01111222233444433445778899999999999999887 888763 245
Q ss_pred eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEE---EeeeeECC---EeEEEEEecCCC---
Q 010125 421 FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAY---MTHAVLGG---IYAIRFATGATL--- 491 (517)
Q Consensus 421 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g---~~~lR~~~~~~~--- 491 (517)
+.+|.+.+.+. +.....+.+.|.+.|+.. ..|++..+ ...||+++...+
T Consensus 369 shIV~V~lg~~----------------------~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg 426 (493)
T PRK13580 369 NHLVLIDVTSF----------------------GLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLG 426 (493)
T ss_pred CCEEEEEeCCH----------------------HHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcC
Confidence 67887777543 112235566777888643 22333344 678999985422
Q ss_pred CcHHHHHHHHHHHHHHHHH
Q 010125 492 TEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 492 t~~~di~~l~~~l~~~~~~ 510 (517)
.+++|++++++.|.++.+.
T Consensus 427 ~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 427 MGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred CCHHHHHHHHHHHHHHHHh
Confidence 2588999999999887654
No 74
>PRK07324 transaminase; Validated
Probab=99.88 E-value=1.5e-20 Score=193.01 Aligned_cols=319 Identities=10% Similarity=0.059 Sum_probs=206.6
Q ss_pred HHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCC
Q 010125 112 EMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENIS 191 (517)
Q Consensus 112 ~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~ 191 (517)
+.+...++.....|....+..++++.+++|+. +++++ ..++|+|+++|+..++.+..+ +
T Consensus 45 ~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~~-------~vi~t~G~~~al~~~~~~l~~-----------~ 103 (373)
T PRK07324 45 EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKPE-------NILQTNGATGANFLVLYALVE-----------P 103 (373)
T ss_pred HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCChh-------hEEEcCChHHHHHHHHHHhCC-----------C
Confidence 33334444444566665667778887777764 34443 689999999999887766532 5
Q ss_pred CeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---
Q 010125 192 KLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP--- 268 (517)
Q Consensus 192 ~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp--- 268 (517)
++.|+++.++|.++...++..|+ +++.+|++.++++.+|+++|+++++++++ +|+++.++|+||.+-+
T Consensus 104 gd~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~~k------li~i~~p~NPtG~~~~~~~ 174 (373)
T PRK07324 104 GDHVISVYPTYQQLYDIPESLGA---EVDYWQLKEENGWLPDLDELRRLVRPNTK------LICINNANNPTGALMDRAY 174 (373)
T ss_pred CCEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhCCCCCc------EEEEeCCCCCCCCCCCHHH
Confidence 56788889999999999999999 99999998655578999999988865443 7888999999999877
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
+++|+++|++||+++++|++|...... ........ ...-.....+++|.++ ....+|+++. ++... +.+.....+
T Consensus 175 l~~i~~~a~~~~~~ii~De~y~~l~~~-~~~~s~~~-~~~~~I~~~s~SK~~~~~G~RiG~i~~-~~~li-~~~~~~~~~ 250 (373)
T PRK07324 175 LEEIVEIARSVDAYVLSDEVYRPLDED-GSTPSIAD-LYEKGISTNSMSKTYSLPGIRVGWIAA-NEEVI-DILRKYRDY 250 (373)
T ss_pred HHHHHHHHHHCCCEEEEEccccccccC-CCCCChhh-ccCCEEEEecchhhcCCccceeEEEec-CHHHH-HHHHHHhCc
Confidence 899999999999999999999765431 11111111 1111244567999987 4466888877 34332 222211111
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG--VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVC 425 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~ 425 (517)
.. + ....+..+++...+. ..-++++.+...++.+.+.+.|++.+++..+ .|..+...
T Consensus 251 ~~----------------~----~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~-~p~gg~~~ 309 (373)
T PRK07324 251 TM----------------I----CAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYV-KPKAVSTS 309 (373)
T ss_pred EE----------------e----cCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEE-CCCceEEE
Confidence 10 0 012233334433332 2234455555666788888888887777765 44444433
Q ss_pred EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 426 FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 426 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
|-..+.. ....++.+++. +.|+...++..+....++|+++.. +++.+++.+++|
T Consensus 310 ~i~~~~~----------------------~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~---~~~~l~~~l~rl 364 (373)
T PRK07324 310 FVKLDVD----------------------MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCC---DTETLKKGLKKL 364 (373)
T ss_pred EEEeCCC----------------------CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecC---CHHHHHHHHHHH
Confidence 3332221 01234555554 557766665555556799999853 567888888888
Q ss_pred HHHHHH
Q 010125 505 QQHLEA 510 (517)
Q Consensus 505 ~~~~~~ 510 (517)
.+..++
T Consensus 365 ~~~l~~ 370 (373)
T PRK07324 365 SEFLRE 370 (373)
T ss_pred HHHHHh
Confidence 777653
No 75
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.88 E-value=7.2e-20 Score=190.50 Aligned_cols=356 Identities=11% Similarity=0.027 Sum_probs=225.6
Q ss_pred CCccceeCCCCC------ChHHHHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccc-cCCCCceEEcC
Q 010125 93 SPNYFAYFPSSG------SIAGFLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFL-FSGNGGGVIQG 164 (517)
Q Consensus 93 ~p~~~~~~~~~~------~~~~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~-~~~~~~g~~t~ 164 (517)
.+..+.+..+.+ .++..+.+.+...++.. ...|....+..++.+.+++|+.+.++.++... .......++|+
T Consensus 32 ~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~ 111 (412)
T PTZ00433 32 PKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCS 111 (412)
T ss_pred CCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeC
Confidence 445555554433 25667777777666543 34566555788999999999988664110000 00113789999
Q ss_pred CchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHh
Q 010125 165 TTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSD 244 (517)
Q Consensus 165 ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~ 244 (517)
|+++++..++.+..+ +++.|+++.++|..+...++..|+ +++.+|+++++++.+|+++|++++++.
T Consensus 112 G~~~al~~~~~~~~~-----------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~ 177 (412)
T PTZ00433 112 GVSHAILMALTALCD-----------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDDR 177 (412)
T ss_pred ChHHHHHHHHHHhcC-----------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhccC
Confidence 999999877765532 566788889999999999999999 999999976556799999999888654
Q ss_pred HhcCCcceEEEeeccCCcccccc---ChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCC-eeeecccccc
Q 010125 245 VEVGLIPLFLCATIGTTAITAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD-SFSLNAHKWF 320 (517)
Q Consensus 245 ~~~g~~p~~vv~t~gtt~~G~id---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aD-si~~~~hK~l 320 (517)
+ .+|+++.++|+||.+- .+++|+++|++||+++++|.+|..+......+.....-....+ .+..++.|.+
T Consensus 178 ~------~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~ 251 (412)
T PTZ00433 178 T------KALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNL 251 (412)
T ss_pred c------eEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhc
Confidence 3 3677889999999864 5788899999999999999999765432111111111011112 4566799998
Q ss_pred -CCCCcceEEEEeCch----hHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--c-HHHHHHH
Q 010125 321 -FATLDCCCLWVKDPR----ALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--G-VANLRHF 392 (517)
Q Consensus 321 -~~p~~~g~l~~~~~~----~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g-~~g~~~~ 392 (517)
.....+|++++.++. .+.+.+.... +.. + ....+...++...+ + ...+++.
T Consensus 252 ~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~-~~~--------------~------~~~~~~q~a~~~~l~~~~~~~~~~~ 310 (412)
T PTZ00433 252 VVPGWRLGWLLLVDPHGNGGDFLDGMKRLG-MLV--------------C------GPCSVVQAALGEALLNTPQEHLEQI 310 (412)
T ss_pred CCCCeeEEEEEEeCCcccHHHHHHHHHHHh-hcc--------------C------CCChHHHHHHHHHHhcCcHHHHHHH
Confidence 466889999874321 1211211100 000 0 01222222222222 1 3456666
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEecCCCee-EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcE
Q 010125 393 LRSHVNMAKLFERLVSGDKRFEIVFPCHFA-VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKA 470 (517)
Q Consensus 393 i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~ 470 (517)
.++..+..+.+.+.|++..++.+. .|+.+ .+.+++....+. + .....++.+.|. +.|+.
T Consensus 311 ~~~~~~~r~~l~~~L~~~~~~~~~-~p~gg~f~~~~l~~~~~~--------------~----~~~~~~~~~~ll~~~gV~ 371 (412)
T PTZ00433 311 VAKLEEGAMVLYNHIGECIGLSPT-MPRGSMFLMSRLDLEKFR--------------D----IKSDVEFYEKLLEEENVQ 371 (412)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccc-CCCeeEEEEEEechhhcC--------------C----CCCHHHHHHHHHHhcCEE
Confidence 677788888899999876677654 45544 444455321000 0 001245666665 46876
Q ss_pred EEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 471 YMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 471 ~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
...+..+....++|++++. .++++++.++.|.++.+..
T Consensus 372 v~pg~~f~~~~~iRis~~~---~~e~l~~al~~l~~~~~~~ 409 (412)
T PTZ00433 372 VLPGEIFHMPGFTRLTISR---PVEVLREAVERIKAFCERH 409 (412)
T ss_pred EeCccccCCCCeEEEEecC---CHHHHHHHHHHHHHHHHHh
Confidence 6655555445799999953 4678999999988877654
No 76
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.88 E-value=2.3e-20 Score=194.73 Aligned_cols=341 Identities=10% Similarity=0.051 Sum_probs=222.0
Q ss_pred HHHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 108 GFLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 108 ~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
..+.+.+...+... ...|....+..++++.+.+++.+..|++-. ...+++|+|+++|+..++.+..+
T Consensus 72 ~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~-----~~~v~it~G~~~al~l~~~~l~~------- 139 (430)
T PLN00145 72 PEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELS-----TDDIYLTAGCAQAIEIIMSVLAQ------- 139 (430)
T ss_pred HHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCC-----hhhEEEeCCHHHHHHHHHHHhcC-------
Confidence 34445555544332 335666677889999999999887776432 13789999999999877765432
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|++++++|..+...+...|+ +++.+++.++.++.+|+++|+++++++++ +++++.++|+||.+
T Consensus 140 ----~Gd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~~------~i~i~~P~NPtG~v 206 (430)
T PLN00145 140 ----PGANILLPRPGYPLYEARAVFSGL---EVRHFDLLPERGWEVDLEGVEALADENTV------AMVIINPNNPCGSV 206 (430)
T ss_pred ----CCCEEEEcCCCCccHHHHHHHcCC---EEEEeeCCcccCCcCCHHHHHHHhCcCce------EEEEeCCCCCCCCC
Confidence 566788999999999889999999 99999886555689999999998876543 78888899999999
Q ss_pred cC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCC-CCC-eeeecccccc-CCCCcceEEEEeCchhHHhh
Q 010125 267 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-GAD-SFSLNAHKWF-FATLDCCCLWVKDPRALVSS 340 (517)
Q Consensus 267 dp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l-~~p~~~g~l~~~~~~~~~~~ 340 (517)
-+ +++|+++|++||+++++|++|+.+.+....+... ..+. ... .+..++.|.+ ...+.+|+++..++..+...
T Consensus 207 ~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~ 285 (430)
T PLN00145 207 YSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPM-GVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKE 285 (430)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccch-hhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhh
Confidence 87 8889999999999999999997654322111111 1111 122 3445599995 45588999987544321110
Q ss_pred ---hcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 341 ---LSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 341 ---~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
......+.. + +.....+...++...+ ..+.++++++...++++.+.+.|++++++.
T Consensus 286 ~~~~~~~~~~~~----------------~--~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~ 347 (430)
T PLN00145 286 TKVVDSIRNYLN----------------I--STDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCIT 347 (430)
T ss_pred hHHHHHHHHHhc----------------c--cCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 000000100 0 0001122223333333 235677888888899999999999988887
Q ss_pred EecCCCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeECCEeEEEEEecCCCC
Q 010125 415 IVFPCHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI-NASGKAYMTHAVLGGIYAIRFATGATLT 492 (517)
Q Consensus 415 l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~t 492 (517)
+...|+.+++.| .+..... .... ...++..++ .+.|++.+++..+....++|+++..
T Consensus 348 ~~~~P~ga~y~~v~l~~~~~-----------------~~~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~--- 406 (430)
T PLN00145 348 CPHKPEGSMFVMVKLDLSCL-----------------SGIK-DDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAI--- 406 (430)
T ss_pred CCcCCCeeeEEEeccChhhc-----------------CCCC-CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC---
Confidence 654565555444 3321100 0000 013344444 4567766666666667899999952
Q ss_pred cHHHHHHHHHHHHHHHHHHHh
Q 010125 493 EKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 493 ~~~di~~l~~~l~~~~~~l~~ 513 (517)
+.++++..++.|.+...+..+
T Consensus 407 ~~~~l~~al~rl~~~~~~~~~ 427 (430)
T PLN00145 407 DPPSLEDGLERLKSFCLRHAK 427 (430)
T ss_pred CHHHHHHHHHHHHHHHHHhcc
Confidence 677899999888888766543
No 77
>PLN02656 tyrosine transaminase
Probab=99.88 E-value=1e-19 Score=189.19 Aligned_cols=340 Identities=10% Similarity=0.018 Sum_probs=222.2
Q ss_pred ChHHHHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 105 SIAGFLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 105 ~~~~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
.+|..+.+.+...+..+ ...|....+..++++.+++|+.+..|.+-+ ...+++|+|+++|+..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~---- 118 (409)
T PLN02656 48 HTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLS-----LDDVFITSGCTQAIDVALSMLAR---- 118 (409)
T ss_pred CCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----cccEEEeCChHHHHHHHHHHHhC----
Confidence 33566666676666543 346777778889999999999988776422 13789999999998777665432
Q ss_pred HhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcc
Q 010125 184 KIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAI 263 (517)
Q Consensus 184 ~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~ 263 (517)
+++.|++++++|..+..+++..|+ +++.+|+++++++.+|+++|++++++.+ .+|+++.++|+|
T Consensus 119 -------~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPt 182 (409)
T PLN02656 119 -------PGANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQNT------VALVIINPGNPC 182 (409)
T ss_pred -------CCCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhccCc------eEEEEECCCCCC
Confidence 566788899999988888899999 9999998654457899999999886543 367888899999
Q ss_pred ccc---cChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCC-C-eeeecccccc-CCCCcceEEEEeCc---
Q 010125 264 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA-D-SFSLNAHKWF-FATLDCCCLWVKDP--- 334 (517)
Q Consensus 264 G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~a-D-si~~~~hK~l-~~p~~~g~l~~~~~--- 334 (517)
|.+ +++++|+++|++||+|+++|++|+.+.+........ ..+... . .+..++.|.+ ...+.+|+++..++
T Consensus 183 G~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~ 261 (409)
T PLN02656 183 GNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPM-GVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGS 261 (409)
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccH-HHhcccCcEEEEcccchhccCcceeEEEEEEeCcccc
Confidence 998 579999999999999999999998665322111111 111111 1 3456699985 55588999988542
Q ss_pred ---hhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHh
Q 010125 335 ---RALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVS 408 (517)
Q Consensus 335 ---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~ 408 (517)
..+...+....... . ....+...++...+ ..+.+++..++..++++.+.+.|+
T Consensus 262 ~~~~~~~~~~~~~~~~~------------------~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~ 320 (409)
T PLN02656 262 FRDPKIVERIKKYFDIL------------------G---GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIK 320 (409)
T ss_pred cccHHHHHHHHHHHhhh------------------c---CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 11222221100000 0 01223333333333 234577777888888899999998
Q ss_pred cCCCeEEecCCCeeEEEEEecCCC-cchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEe
Q 010125 409 GDKRFEIVFPCHFAVVCFRVSPSP-VLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFAT 487 (517)
Q Consensus 409 ~~~~~~l~~~~~~~~v~f~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~ 487 (517)
+++++....+|+.+++.|--.+.. .. .. ......+.+.+.+.|+.+.++..+....++|+++
T Consensus 321 ~~~~~~~~~~p~gg~~~w~~l~~~~~~--------------~~---~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~ 383 (409)
T PLN02656 321 EIPCITCPHKPEGSMAVMVKLNLSLLE--------------DI---SDDIDFCFKLAREESVIILPGTAVGLKNWLRITF 383 (409)
T ss_pred hCCCCcCCcCCCeEEEEEEecchhhcC--------------CC---CCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEe
Confidence 876554333566555544322210 00 00 0001223345566787776665565567999999
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 488 GATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 488 ~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
+. +++++++.++.|+++..+.
T Consensus 384 ~~---~~e~l~eal~rl~~~~~~~ 404 (409)
T PLN02656 384 AA---DPSSLEEALGRIKSFYLRH 404 (409)
T ss_pred CC---CHHHHHHHHHHHHHHHHHh
Confidence 63 5778999999988876543
No 78
>PRK07682 hypothetical protein; Validated
Probab=99.88 E-value=2.1e-20 Score=192.55 Aligned_cols=327 Identities=13% Similarity=0.091 Sum_probs=217.9
Q ss_pred HHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccC
Q 010125 110 LGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 189 (517)
Q Consensus 110 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~ 189 (517)
+.+.+...+......|...++...+.+++++|+.+.+|.+-+. ....++|+|+++|+..++.+..+
T Consensus 38 ~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~---------- 103 (378)
T PRK07682 38 VREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP----NDEIIVTVGASQALDVAMRAIIN---------- 103 (378)
T ss_pred HHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC----------
Confidence 4444444443333457667788999999999999988874221 01589999999998776655432
Q ss_pred CCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc--
Q 010125 190 ISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD-- 267 (517)
Q Consensus 190 ~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id-- 267 (517)
+++.|++.+++|..+..+++..|. +++.++++.++++.+|+++|++++.+.+ .+|+++.++|+||.+-
T Consensus 104 -~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG~~~s~ 173 (378)
T PRK07682 104 -PGDEVLIVEPSFVSYAPLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITAKT------KAILLCSPNNPTGAVLNK 173 (378)
T ss_pred -CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCccc------EEEEEECCCCCcCcCcCH
Confidence 556788889999999999999998 8999998654467899999999886543 3677788999999885
Q ss_pred -ChhHHHHHHHHhCCeEEcccccccccccCcccccc--ccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcC
Q 010125 268 -PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLST 343 (517)
Q Consensus 268 -pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~ 343 (517)
.+++|+++|++||+++++|.+|+.+.... ..... +.+...-..+..+++|.++ ....+|+++..+. . .+.+..
T Consensus 174 ~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~~-~-i~~l~~ 250 (378)
T PRK07682 174 SELEEIAVIVEKHDLIVLSDEIYAELTYDE-AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPVY-F-SEAMLK 250 (378)
T ss_pred HHHHHHHHHHHHcCcEEEEehhhhhcccCC-CCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCHH-H-HHHHHH
Confidence 48899999999999999999998765421 11111 1122223466777999997 4466898887432 2 222211
Q ss_pred CccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 010125 344 NPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHF 421 (517)
Q Consensus 344 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~ 421 (517)
...+.. .....+...++...+ |...++++.++..++++++.+.|++. ++++. .|+.
T Consensus 251 ~~~~~~--------------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~p~g 308 (378)
T PRK07682 251 IHQYSM--------------------MCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH-VPGG 308 (378)
T ss_pred HHHhhc--------------------cCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCe
Confidence 101100 001223333344443 34456777788888999999999987 77654 5666
Q ss_pred eEEEEEec-CCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHH
Q 010125 422 AVVCFRVS-PSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 422 ~~v~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di 497 (517)
+.+.|... +... ...++.+.+. +.|+.+.++..+. +..++|++++. +++++
T Consensus 309 ~~~~~~~~~~~~~----------------------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~l 363 (378)
T PRK07682 309 AFYAFPSISSTGL----------------------SSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYAT---SLEQL 363 (378)
T ss_pred eEEEEEeccCCCC----------------------CHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCC---CHHHH
Confidence 65555432 2110 1234566654 5676655544332 35799999963 57799
Q ss_pred HHHHHHHHHHHHH
Q 010125 498 VVAWTVVQQHLEA 510 (517)
Q Consensus 498 ~~l~~~l~~~~~~ 510 (517)
++.+++|+++.++
T Consensus 364 ~~~l~~l~~~l~~ 376 (378)
T PRK07682 364 QEAMKRMKRFVEN 376 (378)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887654
No 79
>PLN02483 serine palmitoyltransferase
Probab=99.88 E-value=8.6e-20 Score=192.70 Aligned_cols=342 Identities=13% Similarity=0.074 Sum_probs=211.8
Q ss_pred CCCCCCccceeCCCCCChHHHHHHHHHhcccc---cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCC
Q 010125 89 THWQSPNYFAYFPSSGSIAGFLGEMLSSGFNI---VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGT 165 (517)
Q Consensus 89 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~---~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~g 165 (517)
.++.+-.|+|+....+..+..+.+.+...-.. +...|...+...++ .+.+++++|.++ .++.++
T Consensus 103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~el----e~~lA~~~g~~~---------ai~~~~ 169 (489)
T PLN02483 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHREL----EELVARFVGKPA---------AIVFGM 169 (489)
T ss_pred EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHH----HHHHHHHhCCCc---------EEEECC
Confidence 45667789998754444555566665553211 11123333444444 455666666543 355566
Q ss_pred chHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhH
Q 010125 166 TCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDV 245 (517)
Q Consensus 166 gt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~ 245 (517)
|+.+|+.++.+... +++.|++++..|.|+..+++..|+ +++.+|.+ |+++|++.+++..
T Consensus 170 G~~an~~~i~al~~-----------~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-------d~~~le~~l~~~i 228 (489)
T PLN02483 170 GYATNSTIIPALIG-----------KGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-------TPSHLEEVLREQI 228 (489)
T ss_pred HHHHHHHHHHHhCC-----------CCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-------CHHHHHHHHHhhh
Confidence 77788755544322 566788999999999999999999 99999853 5678887776532
Q ss_pred hcC-------CcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCcccccc--ccC--CCCCCeeee
Q 010125 246 EVG-------LIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDG--VEGADSFSL 314 (517)
Q Consensus 246 ~~g-------~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~--~~g--~~~aDsi~~ 314 (517)
..+ ....+|+.....+++|.+.++++|+++|++||+++++|+||+.+.+ .+..+.. ..+ ...+|.++.
T Consensus 229 ~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v~~~~~dI~~~ 307 (489)
T PLN02483 229 AEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGVDPADVDIMMG 307 (489)
T ss_pred hccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCCCcccCcEEEE
Confidence 211 1123555555668899999999999999999999999999975443 1111111 111 236789999
Q ss_pred ccccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHh----cHHH
Q 010125 315 NAHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNY----GVAN 388 (517)
Q Consensus 315 ~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~----g~~g 388 (517)
+++|+++.+ .|+++. +++.. +.+.. ...+... .+.. ..+..+.++++.+ |.+.
T Consensus 308 SfSKs~g~~--GG~i~~-~~~li-~~l~~~~~~~~~~-----------------~~~~p~~~~~~~aaL~~l~~~~g~~~ 366 (489)
T PLN02483 308 TFTKSFGSC--GGYIAG-SKELI-QYLKRTCPAHLYA-----------------TSMSPPAVQQVISAIKVILGEDGTNR 366 (489)
T ss_pred ecchhcccC--ceEEEc-CHHHH-HHHHHhCcccccc-----------------CCcCHHHHHHHHHHHHHHHhCccccc
Confidence 999999763 366554 33332 22221 1111111 0000 1111223344432 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcC
Q 010125 389 LRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASG 468 (517)
Q Consensus 389 ~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 468 (517)
..+++++..++++++.+.|+++ ++++..+....++.+.+... ....++.++|.++|
T Consensus 367 ~~~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~~-----------------------~~~~~~~~~Ll~~G 422 (489)
T PLN02483 367 GAQKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYNP-----------------------AKIPAFSRECLKQN 422 (489)
T ss_pred hHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECCH-----------------------HHHHHHHHHHHHCC
Confidence 4566788999999999999988 78776544445555554322 11235667777788
Q ss_pred cEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 469 KAYMTHAVL----GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 469 ~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
+..+. ..+ .+...+|++++ ...+++||++++++|.++.+.+.
T Consensus 423 I~v~~-~~fp~~p~~~~~vRi~is-a~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 423 VAVVV-VGFPATPLLLARARICIS-ASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred cEEee-eCCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHhC
Confidence 76553 322 23467999985 45577899999999999887654
No 80
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.87 E-value=1.4e-19 Score=187.60 Aligned_cols=303 Identities=13% Similarity=0.080 Sum_probs=196.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH
Q 010125 130 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA 209 (517)
Q Consensus 130 ~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa 209 (517)
+...+.+++.+++++++|.++ ..++|+ |++++..++.+..+ +++.|++.+++|+++..++
T Consensus 84 G~~~l~~~l~~~la~~~g~~~--------~i~~ts-G~~a~~~~~~~l~~-----------~gd~vi~~~~~~~~~~~~~ 143 (397)
T PRK06939 84 GTQDLHKELEEKLAKFLGTED--------AILYSS-CFDANGGLFETLLG-----------KEDAIISDALNHASIIDGV 143 (397)
T ss_pred CCcHHHHHHHHHHHHHhCCCc--------EEEEcC-hHHHHHHHHHHhCC-----------CCCEEEEEhhhhHHHHHHH
Confidence 456788889999999998652 345555 48888766544321 5677889999999999999
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccc
Q 010125 210 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
+.+|. +++.++. +|+++|++++++....+.++.+|+.....+++|.+.++++|.++|++||+|+++|++|
T Consensus 144 ~~~~~---~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~ 213 (397)
T PRK06939 144 RLCKA---KRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSH 213 (397)
T ss_pred HhcCC---ceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcc
Confidence 99998 7777753 4889999998764322224556666666788999999999999999999999999999
Q ss_pred ccccccCccc-cccccCC-CCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCccc
Q 010125 290 AGSACICPEF-RHFIDGV-EGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQI 366 (517)
Q Consensus 290 g~~~~~~~~~-~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~ 366 (517)
+.+.+..... .....++ ..+|.++.++||+++.+ ..|+++.+. ... +.+.. ...+..
T Consensus 214 ~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~~-~~~-~~l~~~~~~~~~----------------- 273 (397)
T PRK06939 214 AVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYTAGRK-EVI-DWLRQRSRPYLF----------------- 273 (397)
T ss_pred cccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEEEeCH-HHH-HHHHHhCccccc-----------------
Confidence 6433221100 0011122 35789999999999655 568777653 322 22321 111111
Q ss_pred cCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhcc
Q 010125 367 TLSRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNC 445 (517)
Q Consensus 367 ~~sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 445 (517)
.++.. ..+..+..+++.+. ...++.++..++++++.+.|++. ++++. ++...++.+.+.+.
T Consensus 274 ~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~-------------- 335 (397)
T PRK06939 274 SNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFTLG-PGEHPIIPVMLGDA-------------- 335 (397)
T ss_pred cCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEECCH--------------
Confidence 11111 01123333444431 22466778888999999999886 66654 34444544443211
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 446 LLSEEEQINEFNRELLESINASGKAYMTHAVL----GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 446 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
....++.+.|.++|+... +..+ .+..++|+++. ...++++|+++++.|+++.+++
T Consensus 336 ---------~~~~~~~~~L~~~gI~v~-~~~~~~~~~~~~~iRi~~~-~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 336 ---------KLAQEFADRLLEEGVYVI-GFSFPVVPKGQARIRTQMS-AAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred ---------HHHHHHHHHHHHCCceEe-eeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 123567778878886544 3222 23468999984 4456889999999998887654
No 81
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.87 E-value=3.4e-21 Score=196.20 Aligned_cols=337 Identities=12% Similarity=0.036 Sum_probs=217.2
Q ss_pred eeCCCCCChHHHHHHHHHhcc----cccccccccC---hhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCC-chHH
Q 010125 98 AYFPSSGSIAGFLGEMLSSGF----NIVGFNWISS---PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGT-TCEA 169 (517)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~s---p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~g-gt~a 169 (517)
.|.+++...|..+.+.+...+ |.....+..+ +.+.++-+++++.+++++|.+... ..+||+| ||+|
T Consensus 2 ~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~~------~vvf~~gs~T~a 75 (355)
T cd00611 2 NFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDNY------KVLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHH
Confidence 356777777777777776665 4444455555 566678889999999999985442 6788877 9999
Q ss_pred HHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccC-HHHHHHHHHHhHhcC
Q 010125 170 ILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLS-PDSLMAQINSDVEVG 248 (517)
Q Consensus 170 ~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d-~~~Le~~i~~~~~~g 248 (517)
+..++..... .+.+.++|+++...|.+ .+.++..|+ +++.++++.++. ..+ ++..+..+++++
T Consensus 76 ~~~~~~~l~~--------~~~~~~~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~-~~~~~~~~~~~~~~~~--- 139 (355)
T cd00611 76 FAAVPLNLLG--------DKGTADYVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGK-YTKIPDVETWDLAPDA--- 139 (355)
T ss_pred HHHHHHhcCC--------CCCeEEEEECCHHHHHH-HHHHHhcCC---CcEEEecccccC-CCCCCCHhhcCCCCCC---
Confidence 8776655411 01145667776556555 345677788 999999864221 113 222223343333
Q ss_pred CcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceE
Q 010125 249 LIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC 328 (517)
Q Consensus 249 ~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 328 (517)
.+|++++.+|.+|.+. . ++++.||+.++|||+++.+....+-- ..|....+.||+++ |.|.|+
T Consensus 140 ---~lV~~~h~~t~tG~~~--~---~i~~~~g~~~~VDa~qs~g~~~idv~--------~~~~~~ss~~K~lG-P~G~g~ 202 (355)
T cd00611 140 ---AYVHYCSNETIHGVEF--D---EVPDTGGVPLVADMSSNILSRPIDVS--------KFGVIYAGAQKNLG-PAGVTV 202 (355)
T ss_pred ---CEEEEeCCcccccEEc--c---eecccCCCeEEEEccccccCCCCCHH--------HhCEEEeecccccC-CCceEE
Confidence 3899999999999972 2 45556999999999999888766421 23444555999875 899999
Q ss_pred EEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHH
Q 010125 329 LWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVA-NLRHFLRSHVNMAKLFERL 406 (517)
Q Consensus 329 l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~i~~~~~~a~~l~~~ 406 (517)
++++++...+ .-...+.+..... ...... . ..+-. ...+++..+++.+-.+ |++++.+++.++++++++.
T Consensus 203 l~~~~~~~~~-~~~~~~~~~~~~~-----~~~~~~-~-~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~ 274 (355)
T cd00611 203 VIVRKDLLGK-ARKITPSMLNYKT-----HADNNS-L-YNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDT 274 (355)
T ss_pred EEECHHHHhh-cccCCCCcccHHH-----HHhcCC-C-CCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 9998764321 1111111211000 000000 0 01111 1335778888888777 7999999999999999999
Q ss_pred HhcCCCeE-EecC--CCe-eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeE
Q 010125 407 VSGDKRFE-IVFP--CHF-AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYA 482 (517)
Q Consensus 407 l~~~~~~~-l~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 482 (517)
|+++|++. ...+ ..+ .+++|.+... .+..++.+.+.++|.+ ... .....+.
T Consensus 275 l~~~~gl~~~~~~~~~rs~~vvsf~~~~~-----------------------~l~~~~~~~~~r~G~~-~~~-~~~~~g~ 329 (355)
T cd00611 275 IDNSNGFYRGPVDKRARSRMNVPFRLGKE-----------------------ELEKEFLKEAEAAGMI-GLK-GHRSVGG 329 (355)
T ss_pred HHhCccccccCCCHHHcCceEEEEEcCCh-----------------------hhhHHHHHHHHHCCCc-ccC-CCcccCe
Confidence 99998863 2111 134 4588886531 2234455566678874 322 2222357
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 483 IRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 483 lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
+|+|+. +.++++||++++++|+++
T Consensus 330 vR~S~~-~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 330 IRASIY-NALSLEGVQALADFMKEF 353 (355)
T ss_pred EEEEcc-CCCCHHHHHHHHHHHHHH
Confidence 999994 677888999999999885
No 82
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=1.4e-20 Score=195.54 Aligned_cols=342 Identities=13% Similarity=0.082 Sum_probs=209.1
Q ss_pred ccceeCCCCCChHHHHHHHHHhcc-c------ccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCch
Q 010125 95 NYFAYFPSSGSIAGFLGEMLSSGF-N------IVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC 167 (517)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~-n------~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt 167 (517)
+++...++....+..+.+.+...+ . +....|...+....+|+.+.+++++++|.+.. .++++|||
T Consensus 20 ~~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--------~v~~~sgt 91 (402)
T cd00378 20 ETLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA--------NVQPHSGS 91 (402)
T ss_pred hCeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce--------eeecCCcH
Confidence 356666665544555555554433 1 12234445567788888889999999998753 24445678
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHH-----HHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHH
Q 010125 168 EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKA-----AQIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAQI 241 (517)
Q Consensus 168 ~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ka-----a~~~G~g~~~v~~vp~d~~-~~~~~d~~~Le~~i 241 (517)
+|+..++.+... +++.|++++.+|.+.... ++..|. +++.++++.+ +++.+|+++|++++
T Consensus 92 ~a~~~~l~~l~~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i 157 (402)
T cd00378 92 QANLAVYFALLE-----------PGDTIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGLIDYDALEKMA 157 (402)
T ss_pred HHHHHHHHHhcC-----------CCCEEEEecCccCccccccccccccccce---eEEEecCCcCcccCCcCHHHHHHHH
Confidence 999877766532 556788888887654322 556676 7777877543 25799999999998
Q ss_pred HHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC
Q 010125 242 NSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF 321 (517)
Q Consensus 242 ~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~ 321 (517)
.+.. +.+|+.+.++ +|...|+++|+++|++||+++|+|++|..+.......... +..+|+++.++|||+.
T Consensus 158 ~~~~-----~~~v~~~~~~--~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~~~~dv~~~s~sK~l~ 227 (402)
T cd00378 158 LEFK-----PKLIVAGASA--YPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---LPGADVVTTTTHKTLR 227 (402)
T ss_pred HhCC-----CCEEEecCcc--cCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---ccCCcEEEeccccCCC
Confidence 6421 2356655544 4677899999999999999999999985544322111111 1257999999999996
Q ss_pred CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHH
Q 010125 322 ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAK 401 (517)
Q Consensus 322 ~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~ 401 (517)
+|. +|++++.++............+... .........+..++.......+.++.++..++++
T Consensus 228 G~~-gg~i~~~~~~~~~~l~~~~~~~~~~-----------------~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 289 (402)
T cd00378 228 GPR-GGLILTRKGELAKKINSAVFPGLQG-----------------GPHLHVIAAKAVALKEALEPEFKAYAKQVVENAK 289 (402)
T ss_pred CCC-ceEEEeccHHHHHHHHHHhCccccC-----------------CchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 665 5666665533322211111111110 0000011122223333323356778888999999
Q ss_pred HHHHHHhcCCCeEEecC-CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEe---eeeE
Q 010125 402 LFERLVSGDKRFEIVFP-CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMT---HAVL 477 (517)
Q Consensus 402 ~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~~ 477 (517)
++.+.|++. +++++.. ...+++.+.+.+... ...++.+.|.+.|+.... +...
T Consensus 290 ~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~~----------------------~~~~~~~~l~~~gI~v~~~~~p~~~ 346 (402)
T cd00378 290 ALAEALKER-GFKVVSGGTDNHLVLVDLRPKGI----------------------TGKAAEDALEEAGITVNKNTLPWDP 346 (402)
T ss_pred HHHHHHHhC-CCeEeecCCCCeEEEEeCCccCC----------------------CHHHHHHHHHHcCcEEcCCcCCCCC
Confidence 999999987 8887643 345566666643210 013444556667765421 1111
Q ss_pred ---CCEeEEEEEecCC---CCcHHHHHHHHHHHHHHHH
Q 010125 478 ---GGIYAIRFATGAT---LTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 478 ---~g~~~lR~~~~~~---~t~~~di~~l~~~l~~~~~ 509 (517)
.+..++|++++.. ..+++||+++++.|+++.+
T Consensus 347 ~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 347 SSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred CCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 1345899988432 2368899999999988653
No 83
>PLN00175 aminotransferase family protein; Provisional
Probab=99.87 E-value=3.9e-20 Score=192.24 Aligned_cols=329 Identities=12% Similarity=0.093 Sum_probs=221.3
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+...+......|....+..++++.+.+|+.+..|.+-+. ...+++|+|+++|+..++.+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~------- 137 (413)
T PLN00175 69 PDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP----EKEVTVTSGCTEAIAATILGLIN------- 137 (413)
T ss_pred CHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCHHHHHHHHHHHhCC-------
Confidence 4455666666655444567777788999999999999988864221 01588999999998766654422
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|++.++.|..+..+++..|+ +++.||++++ ++.+|+++|++++.+.++ +|+++.++|+||.+
T Consensus 138 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~~~~~l~~~~~~~~k------~i~i~~p~NPtG~~ 203 (413)
T PLN00175 138 ----PGDEVILFAPFYDSYEATLSMAGA---KIKTVTLRPP-DFAVPEDELKAAFTSKTR------AILINTPHNPTGKM 203 (413)
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEEECCcc-cCCCCHHHHHHhcCcCce------EEEecCCCCCCCcC
Confidence 566788888999999999999999 9999999754 479999999999865433 67888999999998
Q ss_pred c---ChhHHHHHHHHhCCeEEcccccccccccCcccccc--ccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhh
Q 010125 267 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSS 340 (517)
Q Consensus 267 d---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~ 340 (517)
- .+++|+++|++||+|+++|.+|..+.+.. ..... +.+...-..+..++.|.++ ....+|+++.... .. ..
T Consensus 204 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~-~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~~-l~-~~ 280 (413)
T PLN00175 204 FTREELELIASLCKENDVLAFTDEVYDKLAFEG-DHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPPH-LT-WG 280 (413)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecccCccccCC-cccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCHH-HH-HH
Confidence 5 57889999999999999999997765421 11111 1122222356677999997 5577898876432 22 22
Q ss_pred hcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 341 LSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 341 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
+.....+.. .....+..+++...+ +...+++..+++.++++.+.+.|++. ++++. +
T Consensus 281 l~~~~~~~~--------------------~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 338 (413)
T PLN00175 281 VRQAHSFLT--------------------FATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVY-P 338 (413)
T ss_pred HHHHHhhcc--------------------CCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-C
Confidence 211111110 011223333344433 34456777888888999999999887 77765 4
Q ss_pred CCeeEEE-EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC-----CEeEEEEEecCCC
Q 010125 419 CHFAVVC-FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG-----GIYAIRFATGATL 491 (517)
Q Consensus 419 ~~~~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-----g~~~lR~~~~~~~ 491 (517)
|+.+++. +++.+.+. ....++.+.|. +.|+.++++..+. +..++|++++.
T Consensus 339 p~g~~f~~~~~~~~~~---------------------~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~-- 395 (413)
T PLN00175 339 SSGTYFVMVDHTPFGF---------------------ENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCK-- 395 (413)
T ss_pred CCeeEEEEEeccccCC---------------------CCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcC--
Confidence 5555543 34332210 01245666665 4587766655442 34689999963
Q ss_pred CcHHHHHHHHHHHHHHHH
Q 010125 492 TEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 492 t~~~di~~l~~~l~~~~~ 509 (517)
+++++++.++.|.+..+
T Consensus 396 -~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 396 -DEETLRAAVERMKTKLK 412 (413)
T ss_pred -CHHHHHHHHHHHHHHHh
Confidence 57899999999887654
No 84
>PLN02187 rooty/superroot1
Probab=99.87 E-value=2e-19 Score=189.07 Aligned_cols=344 Identities=10% Similarity=0.038 Sum_probs=222.2
Q ss_pred HHHHHHHHHhcccc-cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 107 AGFLGEMLSSGFNI-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 107 ~~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
|..+.+.+...+.. ....|....+...+.+.+++|+.+.+|++-+ ...+++|+|+++++..++.+..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~------ 153 (462)
T PLN02187 85 CIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLT-----PEDIFLTAGCNQGIEIVFESLAR------ 153 (462)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCC-----cccEEEeCCHHHHHHHHHHHhcC------
Confidence 34455555554432 2346666777888999999999887765322 13789999999998877765532
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++.+++|..+...++..|+ +++.+++.+++++.+|+++|++++++.+ .+|+++.++|+||.
T Consensus 154 -----pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~~~------~~v~i~nP~NPTG~ 219 (462)
T PLN02187 154 -----PNANILLPRPGFPHYDARAAYSGL---EVRKFDLLPEKEWEIDLEGIEAIADENT------VAMVVINPNNPCGN 219 (462)
T ss_pred -----CCCEEEEeCCCCccHHHHHHHcCC---EEEEEeCccccCCccCHHHHHHhcCCCc------EEEEEeCCCCCCCC
Confidence 567788899999999889999999 9999998654568999999998886543 37888889999999
Q ss_pred ccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCee-eeccccccC-CCCcceEEEEeCchhHH--
Q 010125 266 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF-SLNAHKWFF-ATLDCCCLWVKDPRALV-- 338 (517)
Q Consensus 266 idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi-~~~~hK~l~-~p~~~g~l~~~~~~~~~-- 338 (517)
+-+ +++|+++|++||+|+++|++|+...+....+.....-.....++ ..++.|.++ ..+.+|+++..++....
T Consensus 220 v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~ 299 (462)
T PLN02187 220 VYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFET 299 (462)
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHHH
Confidence 865 88999999999999999999977554221111111101112244 456999965 55889999885543211
Q ss_pred -hhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 339 -SSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 339 -~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
+.+.....+. .+.. ....+..+++...+ ..+.+++..+...+.++++.+.|++++.+.
T Consensus 300 ~~~~~~~~~~~----------------~~~~--~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~~ 361 (462)
T PLN02187 300 TKVLQSIKQNL----------------DVTP--DPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCVV 361 (462)
T ss_pred HHHHHHHHHhc----------------cccC--CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCc
Confidence 1111100010 0000 00223333333333 345677778888889999999999886553
Q ss_pred EecCCCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHH-HHHHHhcCcEEEeeeeECCEeEEEEEecCCCC
Q 010125 415 IVFPCHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNREL-LESINASGKAYMTHAVLGGIYAIRFATGATLT 492 (517)
Q Consensus 415 l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 492 (517)
.+..|+.+++.| ++..... ... ....++ .+.+.+.|+++.++..+....++|++++.
T Consensus 362 ~~~~P~gg~fl~~~l~~~~~--------------~~~----~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~--- 420 (462)
T PLN02187 362 CPKKPESCTYLLTKLELSLM--------------DNI----KDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGV--- 420 (462)
T ss_pred CCCCCCEeEEEEeecChhhC--------------CCC----CCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCC---
Confidence 333565545444 3421100 000 001233 33445678777666666556899999963
Q ss_pred cHHHHHHHHHHHHHHHHHHHhh
Q 010125 493 EKRHVVVAWTVVQQHLEAFQSA 514 (517)
Q Consensus 493 ~~~di~~l~~~l~~~~~~l~~~ 514 (517)
.++.++..+++|.++.++..+.
T Consensus 421 ~~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 421 EAHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred CHHHHHHHHHHHHHHHHHhhhc
Confidence 5778999999999988765543
No 85
>PLN02822 serine palmitoyltransferase
Probab=99.87 E-value=4.7e-19 Score=186.74 Aligned_cols=337 Identities=11% Similarity=0.057 Sum_probs=209.4
Q ss_pred HHHHHHHHHhcccccccccccCh---hhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSP---AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp---~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
+..+.+.+...+...+..+..++ +......++.+.+++++|.++ ..++++|++ ++..++.+..+
T Consensus 125 ~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~--------~i~~s~G~~-a~~sai~a~~~---- 191 (481)
T PLN02822 125 NEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD--------SILYSYGLS-TIFSVIPAFCK---- 191 (481)
T ss_pred CHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC--------EEEECCHHH-HHHHHHHHhCC----
Confidence 44456666666654333333221 234455556666777777553 356666554 66555543321
Q ss_pred HhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhc----CCcceEEEeecc
Q 010125 184 KIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEV----GLIPLFLCATIG 259 (517)
Q Consensus 184 ~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~----g~~p~~vv~t~g 259 (517)
++++|++....|+++..++.+.|. +++.++.+ |.++|+..+++..+. .....+|++...
T Consensus 192 -------~gd~Ii~d~~~H~s~~~~~~ls~~---~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i 254 (481)
T PLN02822 192 -------KGDIIVADEGVHWGIQNGLYLSRS---TIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAI 254 (481)
T ss_pred -------CCCEEEEeCCccHHHHHHHHHcCC---eEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecC
Confidence 566788899999999999999988 88988864 556677776643322 112247778888
Q ss_pred CCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccc--cCC--CCCCeeeeccccccCCCCcceEEEEeCch
Q 010125 260 TTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGV--EGADSFSLNAHKWFFATLDCCCLWVKDPR 335 (517)
Q Consensus 260 tt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~--~g~--~~aDsi~~~~hK~l~~p~~~g~l~~~~~~ 335 (517)
.+++|.+-|+++|+++|++||+++++|++|+.+.+ ....+... -++ ...|.++.+++|.++++ .|+++.+ +.
T Consensus 255 ~~~~G~i~~L~~i~~l~~k~~~~LIvDEa~s~gvl-G~~G~G~~e~~~v~~~~~dii~~s~sKalg~~--GG~i~g~-~~ 330 (481)
T PLN02822 255 YQNSGQIAPLDEIVRLKEKYRFRVLLDESNSFGVL-GKSGRGLSEHFGVPIEKIDIITAAMGHALATE--GGFCTGS-AR 330 (481)
T ss_pred CCCCCCccCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCChHHHcCCCCCCCeEEEecchhhhhhC--CeEEEcC-HH
Confidence 88899999999999999999999999999974443 22222111 123 36789999999999753 2666543 33
Q ss_pred hHHhhhc-CCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010125 336 ALVSSLS-TNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRF 413 (517)
Q Consensus 336 ~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~ 413 (517)
.. +.+. ....|.+ ..+.+ ..+.+...+++.+ +...++.+++.+++++|++.|++.+++
T Consensus 331 ii-~~~~~~~~~~~f-----------------sa~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~ 390 (481)
T PLN02822 331 VV-DHQRLSSSGYVF-----------------SASLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGL 390 (481)
T ss_pred HH-HHHHhcCCceee-----------------ccccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 32 2222 1112221 11111 0112222344332 223568889999999999999988788
Q ss_pred EEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEee--eeEC---CEeEEEEEe
Q 010125 414 EIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTH--AVLG---GIYAIRFAT 487 (517)
Q Consensus 414 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~--~~~~---g~~~lR~~~ 487 (517)
++..++.+.++.+.+.... . ..+.......++.++|. ++|++.... ..+. ....+|+++
T Consensus 391 ~~~~~~~spi~~l~l~~~~--------------~-~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~i 455 (481)
T PLN02822 391 SIGSNTLSPIVFLHLEKST--------------G-SAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFV 455 (481)
T ss_pred ccCCCCCCCEEEEEeCCCc--------------c-cccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEE
Confidence 8765566777777774320 0 00001233467778876 667654322 1221 234799998
Q ss_pred cCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 488 GATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 488 ~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
+ ...+++||++++++|+++..++.+
T Consensus 456 s-~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 456 S-AGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred C-CCCCHHHHHHHHHHHHHHHHHHhc
Confidence 5 466888999999999999887653
No 86
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.87 E-value=1e-19 Score=194.51 Aligned_cols=333 Identities=10% Similarity=0.018 Sum_probs=217.3
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcC--CCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHH
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLK--LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 184 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g--~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~ 184 (517)
|..+.+.+...+.. ...|....+..++.+.+++|+.+..+ ++++ .+++|+|+++++..++.+..+
T Consensus 164 p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~-------~I~it~G~~eal~~~~~~l~~----- 230 (517)
T PRK13355 164 PDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVD-------DIYTGNGVSELINLSMSALLD----- 230 (517)
T ss_pred CHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCChh-------HEEEeCcHHHHHHHHHHHhCC-----
Confidence 44444545444432 34677777788999999999976543 3333 789999999998777765432
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 185 IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
+++.|++++++|..+..+++..|. +++.++++++++|.+|+++|++++++.++ +|+++.++||||
T Consensus 231 ------~Gd~Vli~~P~y~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~k------~i~i~nP~NPTG 295 (517)
T PRK13355 231 ------DGDEVLIPSPDYPLWTACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITSRTK------AIVIINPNNPTG 295 (517)
T ss_pred ------CCCEEEEcCCCCcCHHHHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCcCce------EEEEECCCCCCC
Confidence 566788999999999999999999 99999998766789999999999876543 788889999999
Q ss_pred cccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeee-eccccccC-CCCcceEEEEeC-chhH-
Q 010125 265 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFS-LNAHKWFF-ATLDCCCLWVKD-PRAL- 337 (517)
Q Consensus 265 ~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~-~~~hK~l~-~p~~~g~l~~~~-~~~~- 337 (517)
.+-+ +++|+++|++||+|+++|++|..+.+....+..........-.++ .++.|.++ ..+.+|++++.. +...
T Consensus 296 ~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~ 375 (517)
T PRK13355 296 ALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAK 375 (517)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHH
Confidence 9977 889999999999999999999765432211212111111222344 45899974 557899988643 2211
Q ss_pred --HhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHH---HHHHHHHHHHHHHHHhcCC
Q 010125 338 --VSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHF---LRSHVNMAKLFERLVSGDK 411 (517)
Q Consensus 338 --~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~---i~~~~~~a~~l~~~l~~~~ 411 (517)
...+.... ... . .......+++...+. .+.+.+. .++..+.++++.+.|+++|
T Consensus 376 ~~~~~l~~~~-~~~-----------------~---~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 434 (517)
T PRK13355 376 DYIEGLNMLA-NMR-----------------L---CSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIP 434 (517)
T ss_pred HHHHHHHHHh-cCc-----------------C---CcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 11111000 000 0 012334444444442 1112222 2345566788999999888
Q ss_pred CeEEecCCCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEec
Q 010125 412 RFEIVFPCHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATG 488 (517)
Q Consensus 412 ~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~ 488 (517)
++++. +|+.++++| ++..... . . ......+.+.|.++|++++.++.+. +..++|+++.
T Consensus 435 g~~~~-~p~g~fy~~~~l~~~~~-------------~--~---~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~ 495 (517)
T PRK13355 435 GISAV-KPKAAFYIFPKIDVKKF-------------N--I---HDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYL 495 (517)
T ss_pred CcccC-CCCeeeEEEeecCcccC-------------C--C---CCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeC
Confidence 88865 677788777 4432100 0 0 0011233445667787776666553 4679999984
Q ss_pred CCCCcHHHHHHHHHHHHHHHHH
Q 010125 489 ATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 489 ~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.+++++++.++.|.+..+.
T Consensus 496 ---~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 496 ---PRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred ---CCHHHHHHHHHHHHHHHHH
Confidence 4677999999888887654
No 87
>PLN02231 alanine transaminase
Probab=99.87 E-value=4.6e-19 Score=188.42 Aligned_cols=338 Identities=12% Similarity=0.108 Sum_probs=224.8
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC
Q 010125 122 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT 201 (517)
Q Consensus 122 ~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~ 201 (517)
...|..+.+..++.+.+++|+.+..|++.+ ..++++|+|+++|+..++.+.... +++.|++..++
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~-----pe~I~iT~Ga~~ai~~~~~~l~~~----------~gd~Vli~~P~ 225 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPAD-----PNDIFLTDGASPAVHMMMQLLIRS----------EKDGILCPIPQ 225 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCC-----cccEEEeCCHHHHHHHHHHHhccC----------CCCEEEEeCCC
Confidence 456888889999999999999998887543 237999999999988777665321 45678889999
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc---ChhHHHHHHHH
Q 010125 202 HCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD---PLKPLCDVAKQ 278 (517)
Q Consensus 202 H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id---pl~eI~~i~~~ 278 (517)
|..+..++...|. +++.+|++++++|.+|+++|++++++...++..+.+++++.++||||.+- .+++|+++|++
T Consensus 226 Y~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~ 302 (534)
T PLN02231 226 YPLYSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ 302 (534)
T ss_pred ChhHHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 99999998755689999999999987655554566777889999999984 57889999999
Q ss_pred hCCeEEcccccccccccC-ccccc---ccc--CC--CCCCeeee-ccccccC--CCCcceEEEEe--CchhHHhhhcCCc
Q 010125 279 FGIWVHVDAAYAGSACIC-PEFRH---FID--GV--EGADSFSL-NAHKWFF--ATLDCCCLWVK--DPRALVSSLSTNP 345 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~-~~~~~---~~~--g~--~~aDsi~~-~~hK~l~--~p~~~g~l~~~--~~~~~~~~~~~~~ 345 (517)
||+|+++|.+|....+.. ..+.. ... +. .....+++ ++.|.++ ..+.+|++.+. ++... +.+....
T Consensus 303 ~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~-~~l~k~~ 381 (534)
T PLN02231 303 EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVR-EQIYKVA 381 (534)
T ss_pred cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHH-HHHHHHH
Confidence 999999999997765421 11111 110 11 11224544 6999653 56889998764 33332 2221110
Q ss_pred cccCCccccccccccCCCccccCCCCCCchHHHHHHHHh-----cHHHH-------HHHHHHHHHHHHHHHHHHhcCCCe
Q 010125 346 EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY-----GVANL-------RHFLRSHVNMAKLFERLVSGDKRF 413 (517)
Q Consensus 346 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-----g~~g~-------~~~i~~~~~~a~~l~~~l~~~~~~ 413 (517)
. . . .++ ..+...++...+ |...+ .++.+.+.++++.+.+.|++++++
T Consensus 382 ~-~----------------~-~~s---~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi 440 (534)
T PLN02231 382 S-V----------------N-LCS---NISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGV 440 (534)
T ss_pred h-h----------------h-cCC---ChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 0 0 0 011 112222222222 11222 234567778899999999998888
Q ss_pred EEecCCCeeEEEE-Eec-CCCcchhhhhhhhhccccchHHHHH-HHHHHHHHHHH-hcCcEEEeeeeEC---CEeEEEEE
Q 010125 414 EIVFPCHFAVVCF-RVS-PSPVLMDKLKTKYVNCLLSEEEQIN-EFNRELLESIN-ASGKAYMTHAVLG---GIYAIRFA 486 (517)
Q Consensus 414 ~l~~~~~~~~v~f-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lR~~ 486 (517)
++. +|+.+++.| ++. +... . . ..+..+ .....+..+|. +.|++++++..+. |..++|++
T Consensus 441 ~~~-~p~Ggfylw~~l~lp~~~--~----------~-~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit 506 (534)
T PLN02231 441 TCN-KAEGAMYLFPRIHLPQKA--I----------K-AAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCT 506 (534)
T ss_pred eec-CCCeeeEEeccccCcHHH--H----------H-HHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEE
Confidence 864 677888877 222 1100 0 0 000000 00122334444 5688777776664 35579999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHHHHhhcC
Q 010125 487 TGATLTEKRHVVVAWTVVQQHLEAFQSAFK 516 (517)
Q Consensus 487 ~~~~~t~~~di~~l~~~l~~~~~~l~~~~~ 516 (517)
+. +++++++..+++|.+..+++.++|.
T Consensus 507 ~~---~~~e~l~eal~RL~~~~~~~~~~~~ 533 (534)
T PLN02231 507 IL---PQEDKIPAIVSRLTEFHKSFMDEFR 533 (534)
T ss_pred eC---CCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 83 4778999999999999998888774
No 88
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.87 E-value=1.5e-19 Score=187.34 Aligned_cols=328 Identities=11% Similarity=0.042 Sum_probs=213.3
Q ss_pred hHHHHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHH
Q 010125 106 IAGFLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 184 (517)
Q Consensus 106 ~~~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~ 184 (517)
++..+.+.+...++.. ...|. .++...+.+.+++|+.+..|++-+. ...+++|+|+++++..++.+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~~~~----- 115 (399)
T PRK07681 46 PADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA----DKEVLLLMGSQDGLVHLPMVYAN----- 115 (399)
T ss_pred CCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC-----
Confidence 3445666666655432 23333 3577889999999999888864220 02689999999988766554422
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 185 IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
+++.|++.+++|..+...++.+|+ +++.+|+++++++.+|+++|++++.+.+ .+|+++.++||||
T Consensus 116 ------~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~v~l~~P~NPTG 180 (399)
T PRK07681 116 ------PGDIILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLELIPEEIADKA------KMMILNFPGNPVP 180 (399)
T ss_pred ------CCCEEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCcC
Confidence 567788899999999999999999 9999999865567899999999886543 3788888999999
Q ss_pred cccC---hhHHHHHHHHhCCeEEcccccccccccCcccccccc--CCCCCCeeeeccccccC-CCCcceEEEEeCchhHH
Q 010125 265 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALV 338 (517)
Q Consensus 265 ~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~ 338 (517)
.+-+ +++|+++|++||+|+++|.+|+.+............ +...-..+..+++|.++ ....+|+++.. +...
T Consensus 181 ~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~~-~~l~- 258 (399)
T PRK07681 181 AMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGN-EEIV- 258 (399)
T ss_pred cCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeecccccCCccceeEEEecC-HHHH-
Confidence 9976 788999999999999999999866532211111111 11112345567999997 55778998753 3332
Q ss_pred hhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 339 SSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 339 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
+.+.....+.. + ....+..+++...+ +.+.+++..+...++++++.+.|++. ++++.
T Consensus 259 ~~~~~~~~~~~--------------~------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 317 (399)
T PRK07681 259 RALTQFKSNTD--------------Y------GVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVD 317 (399)
T ss_pred HHHHHHHhhcc--------------c------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 22321111100 0 01122223333333 33455666677778888899999887 77764
Q ss_pred cCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCc
Q 010125 417 FPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFATGATLTE 493 (517)
Q Consensus 417 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~~~~~~t~ 493 (517)
.+.....+.+++.+. ....++.+.+.+ .|+...++..+. +..++|++++. +
T Consensus 318 ~p~~g~f~~~~l~~~-----------------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~---~ 371 (399)
T PRK07681 318 KPAGSMFVWAEIPKG-----------------------WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQ---D 371 (399)
T ss_pred CCCeeeEEEEECCCC-----------------------CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecC---C
Confidence 333333344444321 012355666655 676555544332 34689999963 5
Q ss_pred HHHHHHHHHHHHHH
Q 010125 494 KRHVVVAWTVVQQH 507 (517)
Q Consensus 494 ~~di~~l~~~l~~~ 507 (517)
++++++++++|++.
T Consensus 372 ~~~~~~~l~~l~~~ 385 (399)
T PRK07681 372 EEVLQQAVENIRNS 385 (399)
T ss_pred HHHHHHHHHHHHHh
Confidence 77999999999885
No 89
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.87 E-value=4.6e-20 Score=188.03 Aligned_cols=307 Identities=14% Similarity=0.128 Sum_probs=195.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
..++...++|+ .+++++|.+ ..++++|||+|+..++.+.+.. ++..|+++..+|.+.
T Consensus 15 ~~~~~~~~~~~----~la~~~~~~---------~~~~~~sgt~al~~~l~~l~~~----------~gd~vl~~~~~~~~~ 71 (352)
T cd00616 15 TLGPKVREFEK----AFAEYLGVK---------YAVAVSSGTAALHLALRALGIG----------PGDEVIVPSFTFVAT 71 (352)
T ss_pred cCCHHHHHHHH----HHHHHhCCC---------eEEEECCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHHH
Confidence 34565666665 566666653 4688899999998887665211 566799999999999
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEc
Q 010125 206 QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 206 ~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhv 285 (517)
..++...|+ +++.+++++ +++.+|+++|++++++++ .+|++++ ++|.+.|+++|.++|++||+++++
T Consensus 72 ~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~i~~~~------~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~ 138 (352)
T cd00616 72 ANAILLLGA---TPVFVDIDP-DTYNIDPELIEAAITPRT------KAIIPVH---LYGNPADMDAIMAIAKRHGLPVIE 138 (352)
T ss_pred HHHHHHcCC---eEEEEecCC-CcCCcCHHHHHHhcCcCC------eEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEE
Confidence 999999999 999999975 357899999999886543 2555543 589999999999999999999999
Q ss_pred ccccccccccCccccccccCCCCCCeeeec--cccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCC
Q 010125 286 DAAYAGSACICPEFRHFIDGVEGADSFSLN--AHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYK 362 (517)
Q Consensus 286 DaA~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~ 362 (517)
|+||+.+...... . +.. ..|..+++ .|||+..| ..|+++++++....+.-.. ...+.... ..+.
T Consensus 139 D~a~~~g~~~~~~--~-~~~--~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 205 (352)
T cd00616 139 DAAQALGATYKGR--K-VGT--FGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDR-------FKYE 205 (352)
T ss_pred ECCCCCCCeECCE--E-ccc--CcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCC-------Cccc
Confidence 9999765543211 1 111 24555555 56999544 3566777765443221100 00000000 0000
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----CeeEEEEEecCCCcchhh
Q 010125 363 DWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----HFAVVCFRVSPSPVLMDK 437 (517)
Q Consensus 363 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----~~~~v~f~~~~~~~~~~~ 437 (517)
........+...+.....+ ...+++.++.++..++++++++.|+++++++++.++ ...+++|.+.+..
T Consensus 206 ~~~~~~~~~~~~~~aa~~~--~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----- 278 (352)
T cd00616 206 HEILGYNYRLSEIQAAIGL--AQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA----- 278 (352)
T ss_pred cceeeeccCcCHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC-----
Confidence 0011111122223333332 345677888899999999999999999999887543 2356777765310
Q ss_pred hhhhhhccccchHHHHHHHHHHHHHHHHhcCcEE---EeeeeEC--------------------CEeEEEEEecCCCCcH
Q 010125 438 LKTKYVNCLLSEEEQINEFNRELLESINASGKAY---MTHAVLG--------------------GIYAIRFATGATLTEK 494 (517)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~--------------------g~~~lR~~~~~~~t~~ 494 (517)
.....++.+.|.++|+.. ..+.... ....+|+++ ++.+++
T Consensus 279 ----------------~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~-~~~~t~ 341 (352)
T cd00616 279 ----------------GESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPL-HPSLTE 341 (352)
T ss_pred ----------------CCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccC-CCCCCH
Confidence 011345666676777621 1111100 025899997 678899
Q ss_pred HHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQ 505 (517)
Q Consensus 495 ~di~~l~~~l~ 505 (517)
+||++++++|+
T Consensus 342 ~di~~i~~~l~ 352 (352)
T cd00616 342 EEIDRVIEALR 352 (352)
T ss_pred HHHHHHHHHhC
Confidence 99999998874
No 90
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.87 E-value=1.7e-19 Score=186.28 Aligned_cols=334 Identities=14% Similarity=0.112 Sum_probs=217.2
Q ss_pred hHHHHHHHHHhccc-ccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHH
Q 010125 106 IAGFLGEMLSSGFN-IVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 184 (517)
Q Consensus 106 ~~~~~~~~l~~~~n-~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~ 184 (517)
++..+.+.+...++ .....|....+...+.+.+++++++.+|.+... ....++|+|+++++..++.+..+
T Consensus 41 ~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~----- 111 (389)
T PRK05957 41 PPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNN----EQAIVVTAGSNMAFMNAILAITD----- 111 (389)
T ss_pred CCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCChHHHHHHHHHHhcC-----
Confidence 34455666655543 333456666677889999999999999974210 02689999999888766654422
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 185 IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
+++.|+++++.|.....+++..|+ +++.+|.+. ++.+|+++|+++++++++ +|+++.++|+||
T Consensus 112 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~~k------lv~~~~p~NPtG 174 (389)
T PRK05957 112 ------PGDEIILNTPYYFNHEMAITMAGC---QPILVPTDD--NYQLQPEAIEQAITPKTR------AIVTISPNNPTG 174 (389)
T ss_pred ------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEeecCC--CCCcCHHHHHHhcCcCce------EEEEeCCCCCCC
Confidence 566788888888888778888899 999999863 578999999999875443 777888999999
Q ss_pred cccC---hhHHHHHHHHhCCeEEcccccccccccCcccccccc--CCCCCCeeeeccccccC-CCCcceEEEEeCchhHH
Q 010125 265 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALV 338 (517)
Q Consensus 265 ~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~ 338 (517)
.+-| +++|+++|++||+++++|++|+.+............ ....-..++.++.|.++ ....+|++++.+. +.
T Consensus 175 ~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~--~~ 252 (389)
T PRK05957 175 VVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIH--LL 252 (389)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCHH--HH
Confidence 9977 899999999999999999999766432111111111 11112245566899996 4456899887432 22
Q ss_pred hhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 339 SSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 339 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
+.+.....+.. . + ...+....+...+ +.+.+++..++..++++++.+.|++++++..+
T Consensus 253 ~~~~~~~~~~~----------------~-~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 312 (389)
T PRK05957 253 EAIKKIQDTIL----------------I-C---PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTL 312 (389)
T ss_pred HHHHHHHhhcc----------------c-C---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCccc
Confidence 22221111100 0 0 0122333333333 34456777778888899999999888774223
Q ss_pred cCCCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCC
Q 010125 417 FPCHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLT 492 (517)
Q Consensus 417 ~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t 492 (517)
.+|..+++++ ++.+. + ...++.+++. +.|+...++..+. +..++|+++.. .
T Consensus 313 ~~~~gg~~~~~~~~~~-~----------------------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~ 367 (389)
T PRK05957 313 HPANGAFYCFLKVNTD-L----------------------NDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA--L 367 (389)
T ss_pred cCCCeeEEEEEeCCCC-C----------------------ChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec--C
Confidence 4566555543 33221 1 1245666665 4677655544332 24589999953 3
Q ss_pred cHHHHHHHHHHHHHHHHHHH
Q 010125 493 EKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 493 ~~~di~~l~~~l~~~~~~l~ 512 (517)
+++++++.++.|.+..+++.
T Consensus 368 ~~~~l~~~~~~l~~~~~~~~ 387 (389)
T PRK05957 368 QKATAKEGIERLVQGLKTIV 387 (389)
T ss_pred CHHHHHHHHHHHHHHHHhhh
Confidence 57788898888888777654
No 91
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.87 E-value=3e-19 Score=185.55 Aligned_cols=347 Identities=9% Similarity=0.015 Sum_probs=220.7
Q ss_pred ChHHHHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 105 SIAGFLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 105 ~~~~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
.+|..+.+.+...++.. ...|....+..++.+.+++|+.+..|++-. ....++|+|+++++..++.+..+
T Consensus 49 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-----~~~I~it~G~~~al~~~~~~l~~---- 119 (409)
T PLN00143 49 RTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLS-----PDDVYLTLGCKHAAEIIIKVLAR---- 119 (409)
T ss_pred CCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----HhhEEEecChHHHHHHHHHHHcC----
Confidence 34555666666655543 345766678888999999999988776432 13789999999998777665532
Q ss_pred HhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcc
Q 010125 184 KIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAI 263 (517)
Q Consensus 184 ~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~ 263 (517)
+++.|++..++|..+...++..|+ +++.++++.++++.+|+++|++++++.+ ..++++.++|||
T Consensus 120 -------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~~~~~nP~NPT 183 (409)
T PLN00143 120 -------PEANILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADENT------IAMVIINPGNPC 183 (409)
T ss_pred -------CCCEEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhcccCC------EEEEEECCCCCC
Confidence 566788899999999999999999 9999998644467899999998876543 367777899999
Q ss_pred ccccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCC-C-eeeecccccc-CCCCcceEEEEeCchhH
Q 010125 264 TAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA-D-SFSLNAHKWF-FATLDCCCLWVKDPRAL 337 (517)
Q Consensus 264 G~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~a-D-si~~~~hK~l-~~p~~~g~l~~~~~~~~ 337 (517)
|.+-+ +++|+++|++||+++++|.+|............ +..+... . .++.++.|.+ .....+|+++..++..+
T Consensus 184 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~ 262 (409)
T PLN00143 184 GSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGL 262 (409)
T ss_pred CCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhh
Confidence 99966 788888999999999999999766542111111 1111111 2 4556799995 45588999988554322
Q ss_pred HhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 338 VSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 338 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
.+..... ..+... .... ..+ ..+...++...+ ..+.+++.+++..+..+++.+.|+++++..
T Consensus 263 ~~~~~~~-~~~~~~----------~~~~-~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 327 (409)
T PLN00143 263 LQICEIA-DSIKKA----------LNPA-PFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIM 327 (409)
T ss_pred hhhHHHH-HHHHHH----------Hhcc-CCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 1110000 000000 0000 000 122222333333 245677788888888888999998875543
Q ss_pred EecCCCeeEE-EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHH-HHHHhcCcEEEeeeeECCEeEEEEEecCCCC
Q 010125 415 IVFPCHFAVV-CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELL-ESINASGKAYMTHAVLGGIYAIRFATGATLT 492 (517)
Q Consensus 415 l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 492 (517)
....|+.+++ ++++..... . .. ....++. +.+.+.|+.+.++..+....++|++++.
T Consensus 328 ~~~~p~gg~f~w~~l~~~~~-------------~-~~----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~--- 386 (409)
T PLN00143 328 CPQKAEGAFFALVKLNLLLL-------------E-DI----EDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAV--- 386 (409)
T ss_pred CCCCCCeeEEEEEecchhhc-------------C-CC----CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcC---
Confidence 3334554444 444431100 0 00 0022333 3445678777666666556799999953
Q ss_pred cHHHHHHHHHHHHHHHHHHHh
Q 010125 493 EKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 493 ~~~di~~l~~~l~~~~~~l~~ 513 (517)
+++++++.+++|.++.++..+
T Consensus 387 ~~~~l~~al~rl~~~l~~~~~ 407 (409)
T PLN00143 387 EQSSLEDGLGRLKSFCGRHAK 407 (409)
T ss_pred CHHHHHHHHHHHHHHHHHhcc
Confidence 477999999999888765543
No 92
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=5.3e-20 Score=191.92 Aligned_cols=307 Identities=13% Similarity=0.047 Sum_probs=193.0
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
.+....+|+.+++++++++|.+.. . +++++||+|+..++.+... +++.|+++..+|.++..
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~-------~-i~~~sgt~al~~~l~~l~~-----------~gd~Vl~~~~~~~~~~~ 126 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYA-------N-VQPHSGSQANAAVYFALLK-----------PGDTILGMDLAHGGHLT 126 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCce-------e-eecCCchHHHHHHHHHhcC-----------CCCEEEEeccccCCccc
Confidence 345667888788899999998753 3 4445678888766655421 56678888888865432
Q ss_pred ---HH--HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 208 ---AA--QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 208 ---aa--~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
.. ...|+ +++.+|++.+ ++.+|+++|++++++.. +.+|+++. +.+|...|+++|+++|++||++
T Consensus 127 ~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~ 195 (416)
T PRK00011 127 HGSPVNFSGKLY---NVVSYGVDEE-TGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFKRFREIADEVGAY 195 (416)
T ss_pred ccccccccccee---eEeecCcCcc-cCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHHHHHHHHHHcCCE
Confidence 11 22244 7788888642 47899999999997521 22455442 3567778999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCC
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYK 362 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 362 (517)
+++|+||+.+.......... +..+|.++.++||++.+|. .|++++.++............+..
T Consensus 196 livD~a~~~g~~~~g~~~~~---~~~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~~~~~~~~------------- 258 (416)
T PRK00011 196 LMVDMAHIAGLVAAGVHPSP---VPHADVVTTTTHKTLRGPR-GGLILTNDEELAKKINSAVFPGIQ------------- 258 (416)
T ss_pred EEEECcchhcccccCccCCC---CCCCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHHHhCcccc-------------
Confidence 99999987554322111111 2268999999999997665 566666554433221111111110
Q ss_pred CccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCeeEEEEEecCCCcchhhhhh
Q 010125 363 DWQITLSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF-PCHFAVVCFRVSPSPVLMDKLKT 440 (517)
Q Consensus 363 ~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~-~~~~~~v~f~~~~~~~~~~~~~~ 440 (517)
.+... ...+++.++.....+++.+++++..++++++++.|++. ++++.. ....+++.+.+.+..
T Consensus 259 -----~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~-------- 324 (416)
T PRK00011 259 -----GGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKG-------- 324 (416)
T ss_pred -----CCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccC--------
Confidence 00000 11233344444445677889999999999999999986 788763 234466666664321
Q ss_pred hhhccccchHHHHHHHHHHHHHHHHhcCcEEEeee------eECCEeEEEEEecC---CCCcHHHHHHHHHHHHHHHH
Q 010125 441 KYVNCLLSEEEQINEFNRELLESINASGKAYMTHA------VLGGIYAIRFATGA---TLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~------~~~g~~~lR~~~~~---~~t~~~di~~l~~~l~~~~~ 509 (517)
.....+.+.|.+.|+..-.+. .......+|++... ...+++|++++++.|+++..
T Consensus 325 --------------~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 325 --------------LTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred --------------CCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 012456677777786542211 11123468986422 13468899999999988754
No 93
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.86 E-value=1.9e-19 Score=184.62 Aligned_cols=338 Identities=12% Similarity=0.077 Sum_probs=204.5
Q ss_pred CCCCCCCccceeCCCCCChHHHHHHHHHhccccc--c-cccccCh---hhHHHHHHHHHHHHHHcCCCcccccCCCCceE
Q 010125 88 ITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIV--G-FNWISSP---AATELENIVMDWLGQMLKLPKSFLFSGNGGGV 161 (517)
Q Consensus 88 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~--~-~~~~~sp---~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~ 161 (517)
.+.|.+-.|+|+-..++..+. +.+.+.....+. . .+...+. +...+-.++.+.+++++|.+. .+
T Consensus 6 ~~~~~s~~YL~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~---------~l 75 (370)
T PRK05937 6 SIDFVTNDFLGFSRSDTLVHE-VEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---------AF 75 (370)
T ss_pred eEEeECCCccCCCCCHHHHHH-HHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe---------EE
Confidence 345667779998765444333 344444433221 1 2222222 255666677888999999853 35
Q ss_pred EcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHH
Q 010125 162 IQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQI 241 (517)
Q Consensus 162 ~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i 241 (517)
+.++|+.||+ ++..+.. + ++.+|+++...|.|+..+++.+.. ..+.++ ..|+++|++++
T Consensus 76 ~~~sG~~a~~-~~~~~~~----~------~~d~ii~d~~~H~sv~~~~~~~~~---~~~~~~-------~~d~~~l~~~l 134 (370)
T PRK05937 76 IVPSGYMANL-GLCAHLS----S------VTDYVLWDEQVHISVVYSLSVISG---WHQSFR-------HNDLDHLESLL 134 (370)
T ss_pred EECChHHHHH-HHHHHhC----C------CCCEEEEEhhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHH
Confidence 5555667775 3322211 0 456788889999999999888653 333342 46899999999
Q ss_pred HHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccc--cCCCCCCeeeeccccc
Q 010125 242 NSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKW 319 (517)
Q Consensus 242 ~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~ 319 (517)
++..+.+....+|+++..++++|.+.|+++|+++|++||+++|||+||+.+.+..+. .... .+....+.+..+++|.
T Consensus 135 ~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g-~g~~~~~~~~~~~~~~~tlsK~ 213 (370)
T PRK05937 135 ESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDG-KGFCHSLGYENFYAVLVTYSKA 213 (370)
T ss_pred HhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCCC-CchHHhhCCCCCcEEEEechhh
Confidence 865432223346777889999999999999999999999999999999866543321 1111 1223344566788898
Q ss_pred cCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCC-CCCCchHHHHHHHHhcHHHHHHHHHHHHH
Q 010125 320 FFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLS-RRFRSLKLWFVIRNYGVANLRHFLRSHVN 398 (517)
Q Consensus 320 l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s-r~~~al~~~~~l~~~g~~g~~~~i~~~~~ 398 (517)
++ |.|+++++.++. .........+|.+. .+ ......++..+++.+-.++ ..+.++..+
T Consensus 214 ~g-~~G~~vl~~~~~--~~~~~~~~~~~~~s-----------------~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~ 272 (370)
T PRK05937 214 LG-SMGAALLSSSEV--KQDLMLNSPPLRYS-----------------TGLPPHLLISIQVAYDFLSQEG-ELARKQLFR 272 (370)
T ss_pred hh-cCceEEEcCHHH--HHHHHHhCCCCeec-----------------CCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHH
Confidence 86 567777655331 11111111222221 11 1112234445565553334 345677788
Q ss_pred HHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC
Q 010125 399 MAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG 478 (517)
Q Consensus 399 ~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 478 (517)
+++++.+.|.... + ...+.|.+... ....+.+.|.++|+ +++.....
T Consensus 273 l~~~l~~~l~~~~-------~-~~~~~i~~~~~------------------------~~~~~~~~L~~~gi-~v~~~~~~ 319 (370)
T PRK05937 273 LKEYFAQKFSSAA-------P-GCVQPIFLPGI------------------------SEQELYSKLVETGI-RVGVVCFP 319 (370)
T ss_pred HHHHHHHhcCCCC-------C-CCEEEEEeCCh------------------------hHHHHHHHHHHCCe-eEEeeCCC
Confidence 8888888775421 0 01122333221 13466777777886 44432222
Q ss_pred CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 479 GIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 479 g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
...++|+++ +..++++||+++++.|+++.+++.
T Consensus 320 ~~~~iRis~-~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 320 TGPFLRVNL-HAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred CCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHhC
Confidence 345799998 578888899999999999877653
No 94
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.86 E-value=1.9e-19 Score=174.48 Aligned_cols=335 Identities=13% Similarity=0.063 Sum_probs=230.9
Q ss_pred ChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHH
Q 010125 105 SIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 184 (517)
Q Consensus 105 ~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~ 184 (517)
..|..+.+.+...++...++|. -...++-.++.+|.++..++.... ...++++| ++.++..+.+.+.+
T Consensus 38 ~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~-----e~i~~~p~----VVpgi~~~I~~~T~- 105 (388)
T COG1168 38 PTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKP-----EWIVFVPG----VVPGISLAIRALTK- 105 (388)
T ss_pred CCCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEcCc----chHhHHHHHHHhCc-
Confidence 3445667788887877767776 344568889999999999986542 25677776 45555555554432
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcc
Q 010125 185 IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTK-SSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAI 263 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~-~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~ 263 (517)
+++-|++..+.|+.+.++....|- +++..|+-. ++.+.||.++||+++.+.. +.+.+.+.|.||+
T Consensus 106 ------~gd~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~ 171 (388)
T COG1168 106 ------PGDGVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPT 171 (388)
T ss_pred ------CCCeeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCC
Confidence 555677777999999999999998 999999863 4568889999999998764 2378899999999
Q ss_pred ccc---cChhHHHHHHHHhCCeEEcccccccccccCcccccccc-CCCCCC-ee-eeccccccCCC-CcceEEEEeCchh
Q 010125 264 TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-GVEGAD-SF-SLNAHKWFFAT-LDCCCLWVKDPRA 336 (517)
Q Consensus 264 G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~-g~~~aD-si-~~~~hK~l~~p-~~~g~l~~~~~~~ 336 (517)
|.+ +.|.+|++||++||+.++.|..|+-..+....+-.... ....+| ++ +.++.|+++.+ ..|+.+++.|+..
T Consensus 172 Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~l 251 (388)
T COG1168 172 GRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNREL 251 (388)
T ss_pred CccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHH
Confidence 988 78999999999999999999999776654422222111 111233 44 45579999844 7788888888764
Q ss_pred HHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHH--HHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCe
Q 010125 337 LVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVI--RNYGVANLRHFLRSHVNMAKLFERLVSG-DKRF 413 (517)
Q Consensus 337 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l--~~~g~~g~~~~i~~~~~~a~~l~~~l~~-~~~~ 413 (517)
.. .+...-..... -...++++-+.. -..|.+.+.+.++...++.+++.+.+.+ +|++
T Consensus 252 r~-~~~~~l~~~~~-------------------~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v 311 (388)
T COG1168 252 RA-KFLKRLKRNGL-------------------HGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGV 311 (388)
T ss_pred HH-HHHHHHHHhcC-------------------CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCc
Confidence 22 22111111110 011334443333 3359999999999999999999999966 7899
Q ss_pred EEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---CCEeEEEEEecCC
Q 010125 414 EIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL---GGIYAIRFATGAT 490 (517)
Q Consensus 414 ~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~ 490 (517)
++..+..+.+....+.+-++ ...++.+.|.++.++.++.... .|.+++|+.+
T Consensus 312 ~v~~p~gTYL~WLD~r~l~l----------------------~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~--- 366 (388)
T COG1168 312 KVTEPQGTYLAWLDCRELGL----------------------DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNF--- 366 (388)
T ss_pred EEecCCCceeeeeeccccCC----------------------ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEec---
Confidence 98755545555555554321 1146667777777776665533 4578999876
Q ss_pred CCcHHHHHHHHHHHHHHHHH
Q 010125 491 LTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 491 ~t~~~di~~l~~~l~~~~~~ 510 (517)
.++.+-++++++.|....+.
T Consensus 367 acpr~~L~eal~ri~~al~~ 386 (388)
T COG1168 367 ACPRAILEEALERLKRALKK 386 (388)
T ss_pred CCCHHHHHHHHHHHHHHHhc
Confidence 45676778887777765543
No 95
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.86 E-value=9.8e-20 Score=188.97 Aligned_cols=307 Identities=10% Similarity=0.068 Sum_probs=193.9
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH-HH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA-LQ 206 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s-~~ 206 (517)
.|...++|+.+.+.+++++|.+.. -+++++||.||+.++.+... +++.|+++...|.+ +.
T Consensus 69 ~~~~~~lE~~~~~~la~l~g~~~a--------lv~~~SG~~A~~~~l~al~~-----------~GD~Vl~~~~~~~~~~~ 129 (416)
T PRK13034 69 CEFVDEVEALAIERAKQLFGCDYA--------NVQPHSGSQANGAVYLALLK-----------PGDTILGMSLSHGGHLT 129 (416)
T ss_pred ChHHHHHHHHHHHHHHHHhCCCce--------EEecCCcHHHHHHHHHHhcC-----------CCCEEEEcCccceeeee
Confidence 466888888777899999987632 25578899999988776522 67789999999987 33
Q ss_pred HHHHHcCCCCCCE--EEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 207 KAAQIVGIDVKNF--RAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 207 kaa~~~G~g~~~v--~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
..++....+. .+ +.++++.. ++.+|+++|++.++.. .|.+|+.+. +.+|..-|+++|.++|++||++++
T Consensus 130 ~g~~~~~~~~-~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~li 200 (416)
T PRK13034 130 HGAKVSLSGK-WYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALLM 200 (416)
T ss_pred cCCcceeccc-eeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEEE
Confidence 3333221111 22 34555432 4679999999998642 134555433 346788899999999999999999
Q ss_pred cccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCc
Q 010125 285 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDW 364 (517)
Q Consensus 285 vDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 364 (517)
||+||+.+.+..... ...+..+|.+++++|||+.+|.| |++++.++.... .... +++..
T Consensus 201 vD~Aha~G~~~~g~~---~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~-~~~~---~~~~~------------- 259 (416)
T PRK13034 201 VDMAHIAGLVAAGEH---PNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAK-KINS---AVFPG------------- 259 (416)
T ss_pred EeCcccccCcccCCC---CCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHH-HHHh---hcCCc-------------
Confidence 999998877654321 12234799999999999987765 555565543321 1111 11110
Q ss_pred cccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEecCCCcchhhhhhhh
Q 010125 365 QITLSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP-CHFAVVCFRVSPSPVLMDKLKTKY 442 (517)
Q Consensus 365 ~~~~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~ 442 (517)
++.+... ...++..++...-..+..++.++..+++++|++.|++. ||.+..+ .+++++.+.+....
T Consensus 260 -~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~---------- 327 (416)
T PRK13034 260 -LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKG---------- 327 (416)
T ss_pred -ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCC----------
Confidence 0111111 11122222322211234466789999999999999988 8988742 45667666654431
Q ss_pred hccccchHHHHHHHHHHHHHHHHhcCcEEEeeee-------ECCEeEEEEEecCC----CCcHHHHHHHHHHHHHHHH
Q 010125 443 VNCLLSEEEQINEFNRELLESINASGKAYMTHAV-------LGGIYAIRFATGAT----LTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 443 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-------~~g~~~lR~~~~~~----~t~~~di~~l~~~l~~~~~ 509 (517)
.....+.++|.+.|+.. .... ......||+++ +. ..+++||+++++.|.++..
T Consensus 328 ------------~~~~~~~~~L~~~GI~v-~~~~~p~~~~~p~~~~~lR~~~-~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 328 ------------LSGKDAEQALERAGITV-NKNTVPGDTESPFVTSGIRIGT-PAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred ------------CCHHHHHHHHHhCCcEE-eccCCCCCCcCCCCCCeeEeCc-HHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 11234456677778643 3210 11145799996 34 4558899999999987754
No 96
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.86 E-value=1.1e-18 Score=181.08 Aligned_cols=342 Identities=12% Similarity=0.060 Sum_probs=214.2
Q ss_pred HHHHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 107 AGFLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+..+.+.+...+... ...|....+...+++.+++++....|.+-. ....++|+|+|+|+..++.+..+
T Consensus 50 ~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~ii~t~G~t~al~~~~~~l~~------ 118 (403)
T TIGR01265 50 DPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLT-----ADDVVLTSGCSQAIEICIEALAN------ 118 (403)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----HHHEEEecChHHHHHHHHHHhCC------
Confidence 445555555555332 235655666777888888888765554322 12689999999999887776532
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++++++|..+..++...|+ +++.+++++++++.+|++++++++.++++ +|+++.++|++|.
T Consensus 119 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~~------~v~i~~p~NPtG~ 184 (403)
T TIGR01265 119 -----PGANILVPRPGFPLYDTRAAFSGL---EVRLYDLLPEKDWEIDLDGLEALADEKTV------AIVVINPSNPCGS 184 (403)
T ss_pred -----CCCEEEEeCCCchhHHHHHHHcCC---EEEEecCCcccCCccCHHHHHHHhCcCcc------EEEEecCCCCCCC
Confidence 556688888999998899999999 99999886555678999999998865443 6888889999999
Q ss_pred cc---ChhHHHHHHHHhCCeEEcccccccccccCccccccccCCC-CCC-eeeeccccccC-CCCcceEEEEeCch-hHH
Q 010125 266 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-GAD-SFSLNAHKWFF-ATLDCCCLWVKDPR-ALV 338 (517)
Q Consensus 266 id---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~-~p~~~g~l~~~~~~-~~~ 338 (517)
+- ++++|.++|+++|+|+++|++|+.+....+.+.. +..+. ... .++.++.|.++ ....+|++++.++. .+.
T Consensus 185 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~ 263 (403)
T TIGR01265 185 VFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFR 263 (403)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhH
Confidence 85 4899999999999999999999776542211111 11111 122 44567999865 44789999886432 111
Q ss_pred hhh-cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 339 SSL-STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 339 ~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
..+ .....+... ... ...+....+-.++......-+++..++..+.++++.+.|+..+++++..
T Consensus 264 ~~~~~~~~~~~~~--------------~~~-~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 328 (403)
T TIGR01265 264 DTVLQGLKNLLQR--------------ILG-PATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPK 328 (403)
T ss_pred HHHHHHHHHHhhh--------------hcC-CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecC
Confidence 101 000000000 000 0001111222223222234566677778888889999998887877554
Q ss_pred CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeECCEeEEEEEecCCCCcHHH
Q 010125 418 PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI-NASGKAYMTHAVLGGIYAIRFATGATLTEKRH 496 (517)
Q Consensus 418 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 496 (517)
+.....+.+++..... ... ....++.+.+ .+.|+.+.++..+....++|+++.. .++.
T Consensus 329 p~~g~f~~~~~~~~~~--------------~~~----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~---~~~~ 387 (403)
T TIGR01265 329 PEGAMYLMVKLELELF--------------PEI----KDDVDFCEKLVREESVICLPGSAFGLPNWVRITITV---PESM 387 (403)
T ss_pred CCceeEEEEecccccc--------------CCC----CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecC---CHHH
Confidence 4444455555532100 000 0123455554 4567766665555456799999963 4668
Q ss_pred HHHHHHHHHHHHHH
Q 010125 497 VVVAWTVVQQHLEA 510 (517)
Q Consensus 497 i~~l~~~l~~~~~~ 510 (517)
+++.+++|.++.++
T Consensus 388 l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 388 LEEACSRIKEFCER 401 (403)
T ss_pred HHHHHHHHHHHHHh
Confidence 88888888776643
No 97
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.6e-19 Score=186.03 Aligned_cols=327 Identities=12% Similarity=0.080 Sum_probs=201.8
Q ss_pred HHHHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 107 AGFLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+..+.+.+...++.. ...|....+.. ++++++++++|.+++ ..++|+|+|+|+..++.+...
T Consensus 43 ~~~~~~a~~~~~~~~~~~~y~~~~g~~----~lr~~ia~~l~~~~~-------~v~~~~g~t~al~~~~~~~~~------ 105 (380)
T PRK06225 43 HEEVREAMIRCIEEGEYCKYPPPEGFP----ELRELILKDLGLDDD-------EALITAGATESLYLVMRAFLS------ 105 (380)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCcchH----HHHHHHHHhcCCCCC-------cEEEeCCHHHHHHHHHHHhcC------
Confidence 344555655555432 22342222333 345667777888764 689999999998877765422
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCC-CCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTK-SSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~-~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
++..|++++++|.....++...|. +++.+|++. .+++.+|+++|++.+.++++ +|+++.+++++|
T Consensus 106 -----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~------~v~l~~p~NptG 171 (380)
T PRK06225 106 -----PGDNAVTPDPGYLIIDNFASRFGA---EVIEVPIYSEECNYKLTPELVKENMDENTR------LIYLIDPLNPLG 171 (380)
T ss_pred -----CCCEEEEcCCCCcchHHHHHHhCc---eEEeeccccccCCccCCHHHHHhhcCCCce------EEEEeCCCCCCC
Confidence 445677888888888888999999 999999753 23478999999998876443 677778999999
Q ss_pred cc---cChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCC-CCcceEEEEeCchhHHhh
Q 010125 265 AV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFA-TLDCCCLWVKDPRALVSS 340 (517)
Q Consensus 265 ~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~~~~~~~~~~ 340 (517)
.+ +++++|+++|++||+++++|++|+.+..... ...........+..+++|+++. ...+|++++++ ... +.
T Consensus 172 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~---~~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~-~l~-~~ 246 (380)
T PRK06225 172 SSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHT---LAAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATP-DLI-EV 246 (380)
T ss_pred cCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCC---chhhcCCCCEEEEeechhhcCCccceeEEEecCH-HHH-HH
Confidence 86 4599999999999999999999865432111 0000011234556688999974 35579988753 332 22
Q ss_pred hcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCC
Q 010125 341 LSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV-FPC 419 (517)
Q Consensus 341 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~-~~~ 419 (517)
+.. +... .++ .+ ......+..++.. ..+.++...+...++.+.+.+.|++++++.+. .++
T Consensus 247 ~~~---~~~~------------~~~--~~-~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 307 (380)
T PRK06225 247 VKS---IVIN------------DLG--TN-VIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPS 307 (380)
T ss_pred HHH---HHhc------------ccC--CC-HHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCC
Confidence 211 1000 000 00 0111111222222 12223334444556677788888887775432 244
Q ss_pred CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---CCEeEEEEEecCCCCcHHH
Q 010125 420 HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL---GGIYAIRFATGATLTEKRH 496 (517)
Q Consensus 420 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~d 496 (517)
..+++.+.+.+.. ....++.++|.++|+...++..+ .+..++|+++.. ++++
T Consensus 308 ~g~~~~~~~~~~~----------------------~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s~~~---~~e~ 362 (380)
T PRK06225 308 HGNMMVIDISEAG----------------------IDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVSFSI---PREQ 362 (380)
T ss_pred CCeEEEEEccccc----------------------CCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEEeCC---CHHH
Confidence 5556655554321 01245677777778654433211 235689999843 5789
Q ss_pred HHHHHHHHHHHHHHHHh
Q 010125 497 VVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 497 i~~l~~~l~~~~~~l~~ 513 (517)
++++++.|+++.+++++
T Consensus 363 l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 363 VEVFCEEFPDVVETLRT 379 (380)
T ss_pred HHHHHHHHHHHHHHhhc
Confidence 99999999999887764
No 98
>PRK08912 hypothetical protein; Provisional
Probab=99.86 E-value=5.3e-19 Score=182.65 Aligned_cols=314 Identities=12% Similarity=0.051 Sum_probs=205.9
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCcccccCCCC-ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC
Q 010125 123 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT 201 (517)
Q Consensus 123 ~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~ 201 (517)
..|....+..++++.+++|+.+.+|.+.+ .. .+++|+|+++|+..++.+..+ +++.|++.+++
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~~i~~t~G~~~al~~~~~~~~~-----------~gd~Vlv~~p~ 120 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLD-----PETEVMVTSGATEALAAALLALVE-----------PGDEVVLFQPL 120 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----CcccEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCC
Confidence 45666667789999999999988886432 12 689999999998666554322 55678889999
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHH
Q 010125 202 HCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQ 278 (517)
Q Consensus 202 H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~ 278 (517)
|..+..+++..|+ +++.+|++. +++.+|+++|++.+...+ .+|+++.++|+||.+-+ +++|+++|++
T Consensus 121 y~~~~~~~~~~g~---~~~~~~~~~-~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~ 190 (387)
T PRK08912 121 YDAYLPLIRRAGG---VPRLVRLEP-PHWRLPRAALAAAFSPRT------KAVLLNNPLNPAGKVFPREELALLAEFCQR 190 (387)
T ss_pred chhhHHHHHHcCC---EEEEEecCc-ccCcCCHHHHHHHhCccc------eEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 9999999999999 999999874 357899999999886543 36777899999999865 7779999999
Q ss_pred hCCeEEcccccccccccCcccccc--ccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccc
Q 010125 279 FGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATES 355 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 355 (517)
||+++++|.+|+.+.......... +.+....+.+..+++|.++ ....+|+++.... .. +.+.......
T Consensus 191 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-~~-~~l~~~~~~~------- 261 (387)
T PRK08912 191 HDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPP-LL-RVLAKAHQFL------- 261 (387)
T ss_pred CCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCHH-HH-HHHHHHHhhc-------
Confidence 999999999997654321111111 1222334678889999998 4466899887432 22 2221110000
Q ss_pred cccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeE-EEEEecCCC
Q 010125 356 MQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAV-VCFRVSPSP 432 (517)
Q Consensus 356 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~-v~f~~~~~~ 432 (517)
.... .+....++...+ ..+.+++..++..++++++.+.|++. ++++. +++.+. +++.+.+..
T Consensus 262 ---------~~~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~l~~~l~~~~ 326 (387)
T PRK08912 262 ---------TFTT----PPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL-PSQGTYFLTVDLAPLG 326 (387)
T ss_pred ---------cccC----ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEecccccC
Confidence 0000 111111222222 23445667777888899999999887 67765 455444 344443310
Q ss_pred cchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC----CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 433 VLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG----GIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
. .....++.+.+. +.|+...++..+. +..++|++++. .++.+++.++.|.+.
T Consensus 327 ~--------------------~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~l~rl~~~ 383 (387)
T PRK08912 327 L--------------------AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEAVERLAAA 383 (387)
T ss_pred C--------------------CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHHHHHHHHH
Confidence 0 001245566654 5677655544442 24799999974 467888888888765
Q ss_pred HH
Q 010125 508 LE 509 (517)
Q Consensus 508 ~~ 509 (517)
.+
T Consensus 384 l~ 385 (387)
T PRK08912 384 RR 385 (387)
T ss_pred Hh
Confidence 43
No 99
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=1.4e-19 Score=189.60 Aligned_cols=352 Identities=12% Similarity=0.047 Sum_probs=213.5
Q ss_pred ceeCCCCCChHHHHHHHHHhcc-ccccccc------ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCce-EEcCCchH
Q 010125 97 FAYFPSSGSIAGFLGEMLSSGF-NIVGFNW------ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGG-VIQGTTCE 168 (517)
Q Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~------~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g-~~t~ggt~ 168 (517)
+..+++-......+.+.+.+.+ |.+...| .......++|+.+.+...++|+...+.. .. +-..+|+.
T Consensus 37 l~liasen~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~~-----~~nv~~~SG~~ 111 (475)
T PLN03226 37 LELIASENFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEKW-----GVNVQPLSGSP 111 (475)
T ss_pred eeEecCCccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCccee-----EEecCcCchHH
Confidence 3334443333333444444444 4444333 3334678899989999999999876521 01 11378899
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEEeCC------CCchHHHHHHHHcCCCCC-CEEEEecCCCCCcccCHHHHHHHH
Q 010125 169 AILCTLTAARDRVLNKIGRENISKLIVYGSD------QTHCALQKAAQIVGIDVK-NFRAIKTTKSSSYGLSPDSLMAQI 241 (517)
Q Consensus 169 a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~------~~H~s~~kaa~~~G~g~~-~v~~vp~d~~~~~~~d~~~Le~~i 241 (517)
||+.++.+... +++.|++.+ .+|.+...++++.+.+.. ++...++++ +++.+|+++|++++
T Consensus 112 AN~av~~aL~~-----------pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l 179 (475)
T PLN03226 112 ANFAVYTALLQ-----------PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKA 179 (475)
T ss_pred HHHHHHHHhCC-----------CCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHH
Confidence 99877776643 566677633 344444444443333100 111334554 35799999999998
Q ss_pred HHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC
Q 010125 242 NSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF 321 (517)
Q Consensus 242 ~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~ 321 (517)
.+. +|.+|+++ .+.+|..-|+++|.++|++||++++||+||+.+.+..+..... ++.+|++++++||||.
T Consensus 180 ~~~-----~pklIv~~--~S~~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~ 249 (475)
T PLN03226 180 MLF-----RPKLIIAG--ASAYPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLR 249 (475)
T ss_pred hhc-----CCeEEEEe--cCcCCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCccccc
Confidence 653 24345443 3457888899999999999999999999999988765433222 3479999999999999
Q ss_pred CCCcceEEEEeCchhHHhhhc-CCc---cc--cCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHHHHHHHHH
Q 010125 322 ATLDCCCLWVKDPRALVSSLS-TNP---EY--LKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVANLRHFLR 394 (517)
Q Consensus 322 ~p~~~g~l~~~~~~~~~~~~~-~~~---~y--l~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~i~ 394 (517)
+|.| |++++++... . .+. ... +| ..+. ...+.++++-. ....++.++++.+-..+++++.+
T Consensus 250 GP~G-g~I~~~~~~~-~-~~~~g~~~~~d~~~~i~~---------a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~ 317 (475)
T PLN03226 250 GPRG-GMIFFRKGPK-P-PKGQGEGAVYDYEDKINF---------AVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQK 317 (475)
T ss_pred CCCc-eEEEEchhhc-c-cccCCCccHHHHHHHhcc---------ccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 8987 7777765321 0 000 000 01 0000 00011233322 12345666777776667888899
Q ss_pred HHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEe
Q 010125 395 SHVNMAKLFERLVSGDKRFEIVFP-CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMT 473 (517)
Q Consensus 395 ~~~~~a~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~ 473 (517)
+..+++++|++.|++ .||+++.. .+..++.+.+.+.++ ...++.+.|.+.|+..-.
T Consensus 318 ~~~~na~~L~~~L~~-~G~~l~~~~t~~hi~lv~~~~~gi----------------------~~~~~~~~L~~~~I~~nk 374 (475)
T PLN03226 318 QVKANAAALANRLMS-KGYKLVTGGTDNHLVLWDLRPLGL----------------------TGSRVEKVLDLAHITLNK 374 (475)
T ss_pred HHHHHHHHHHHHHHh-CCCEEEcCCCCCCEEEEEccCCCC----------------------CHHHHHHHHHHCCCEECC
Confidence 999999999999988 49999853 234566666544321 123444555566664322
Q ss_pred eeeE-----CCEeEEEEE---ecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 474 HAVL-----GGIYAIRFA---TGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 474 ~~~~-----~g~~~lR~~---~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.+.. -....+|+. +++...+++|++++.+.|.++.+.
T Consensus 375 ~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 375 NAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 1100 112357772 245667888999999999888763
No 100
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.85 E-value=4.2e-19 Score=183.20 Aligned_cols=294 Identities=12% Similarity=0.071 Sum_probs=190.0
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
..+..++.+++++++|.+ ..+++++|+++++.++.+..+ +++.|++++..|.+...++..
T Consensus 83 ~~~~~~l~~~la~~~~~~---------~~i~~~~g~~~~~~~l~~~~~-----------~gd~V~~~~~~~~~~~~~~~~ 142 (385)
T PRK05958 83 SPAHEALEEELAEWFGAE---------RALLFSSGYAANLAVLTALAG-----------KGDLIVSDKLNHASLIDGARL 142 (385)
T ss_pred cHHHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHhCC-----------CCCEEEEeCccCHHHHHHHHh
Confidence 445566777888888743 356777788888765543311 556788899999999999999
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccc
Q 010125 212 VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 291 (517)
Q Consensus 212 ~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~ 291 (517)
.|+ +++.+|. .|++.+++.++.... ...+++.....+++|.+.|+++|+++|++||+|+++|++|+.
T Consensus 143 ~g~---~~~~~~~-------~d~~~l~~~i~~~~~---~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~ 209 (385)
T PRK05958 143 SRA---RVRRYPH-------NDVDALEALLAKWRA---GRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT 209 (385)
T ss_pred cCC---ceEEeCC-------CCHHHHHHHHHhccC---CCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc
Confidence 998 8888864 378999998865311 134666666788899999999999999999999999999965
Q ss_pred ccccCcccccc-ccCCC-CCC-eeeeccccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccccccccCCCcccc
Q 010125 292 SACICPEFRHF-IDGVE-GAD-SFSLNAHKWFFATLDCCCLWVKDPRALVSSLS-TNPEYLKNKATESMQVVDYKDWQIT 367 (517)
Q Consensus 292 ~~~~~~~~~~~-~~g~~-~aD-si~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~ 367 (517)
+.+........ ..++. ..| .+..++||+++.+ | |+++. +++.. +.+. ....|.. .
T Consensus 210 g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G-g~~~~-~~~~~-~~~~~~~~~~~~-----------------~ 268 (385)
T PRK05958 210 GVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSS-G-AAVLG-SETLI-DYLINRARPFIF-----------------T 268 (385)
T ss_pred cccCCCCCchHHhhCCCCCCceEEEEechhhcccC-C-cEEEc-CHHHH-HHHHHhCcccee-----------------c
Confidence 54321110000 01121 234 6678899999753 3 55544 33322 2221 1111111 1
Q ss_pred CCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccc
Q 010125 368 LSRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCL 446 (517)
Q Consensus 368 ~sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 446 (517)
.+.. .....++.+++.+... .++.++..++++++.+.|++. ++++. ++..++++|.+...
T Consensus 269 ~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~--------------- 329 (385)
T PRK05958 269 TALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGDN--------------- 329 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCCH---------------
Confidence 1111 1222344555544221 567788889999999999876 57654 46667777776321
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeee---ECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 447 LSEEEQINEFNRELLESINASGKAYMTHAV---LGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 447 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
....++.++|.++|+....... ..+..++|+++ +..++++|++++++.|+++
T Consensus 330 --------~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~-~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 330 --------ERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITL-TAAHTEADIDRLLEALAEA 384 (385)
T ss_pred --------HHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEe-cCCCCHHHHHHHHHHHHhc
Confidence 2245677888888875532111 12456899998 4566788999999998764
No 101
>PRK08363 alanine aminotransferase; Validated
Probab=99.85 E-value=5.6e-19 Score=183.08 Aligned_cols=334 Identities=10% Similarity=0.070 Sum_probs=214.7
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+...+......|...++..++++.+.+|+....|..-+ ..+.++|+|+++|+..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~it~G~~~al~~~~~~~~~------- 115 (398)
T PRK08363 48 PEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDIT-----PDDVRVTAAVTEALQLIFGALLD------- 115 (398)
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCC-----hhhEEEeCCHHHHHHHHHHHhCC-------
Confidence 444555555544322335666678899999999999887775322 12789999999998877665422
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEE-ecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAI-KTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~v-p~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++++++|..+..+++..|. .++.+ +.++ +++.+|++.|++++++.+ .+|+++.++|+||.
T Consensus 116 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~-~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~ 181 (398)
T PRK08363 116 ----PGDEILIPGPSYPPYTGLVKFYGG---VPVEYRTIEE-EGWQPDIDDIRKKITEKT------KAIAVINPNNPTGA 181 (398)
T ss_pred ----CCCEEEEcCCCCcchHHHHHHcCC---EEEEeccccc-cCCcCCHHHHHhhCCcce------EEEEEECCCCCCCc
Confidence 566788999999999999999998 88877 5543 356899999999886543 36777899999998
Q ss_pred ccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCC-Cee-eecccccc-CCCCcceEEEEeCchhHHh
Q 010125 266 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA-DSF-SLNAHKWF-FATLDCCCLWVKDPRALVS 339 (517)
Q Consensus 266 idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~a-Dsi-~~~~hK~l-~~p~~~g~l~~~~~~~~~~ 339 (517)
+-+ +++|+++|++||+++++|++|+...+.. .... +..+... ..+ ..+++|++ ..+..+|++++.++..+..
T Consensus 182 ~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~-~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~ 259 (398)
T PRK08363 182 LYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG-KHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLA 259 (398)
T ss_pred CcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC-cccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHH
Confidence 866 8999999999999999999997654321 1111 1111122 233 56799995 5668899998843221111
Q ss_pred hhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 340 SLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 340 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
.+......+... .+ ....+...++...+ ..+.+++..++..++++++.+.|++++++++.
T Consensus 260 ~l~~~~~~~~~~-------------~~----~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~- 321 (398)
T PRK08363 260 EVREAIDKLARI-------------RL----CPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIPGISTT- 321 (398)
T ss_pred HHHHHHHHHhcc-------------cc----cCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec-
Confidence 111000000000 00 01222222222222 34567777788888899999999888887754
Q ss_pred CCCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHH-HHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCc
Q 010125 418 PCHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNREL-LESINASGKAYMTHAVLG--GIYAIRFATGATLTE 493 (517)
Q Consensus 418 ~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~ 493 (517)
+|..+++.| ++.+... ....++ .+.+.++|+...++..+. +..++|+++.. +
T Consensus 322 ~p~g~~~~~~~l~~~~~---------------------~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~---~ 377 (398)
T PRK08363 322 KPQGAFYIFPRIEEGPW---------------------KDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLP---P 377 (398)
T ss_pred CCCeEEEEEEEeccCCC---------------------CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecC---C
Confidence 566777666 4432100 001223 344567787665555443 34699999852 5
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010125 494 KRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 494 ~~di~~l~~~l~~~~~~ 510 (517)
++++++.++.|+++.++
T Consensus 378 ~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 378 VEILEEAMDRFEEFMRE 394 (398)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77899999998877654
No 102
>PRK07777 aminotransferase; Validated
Probab=99.85 E-value=4.1e-19 Score=183.45 Aligned_cols=326 Identities=13% Similarity=0.035 Sum_probs=211.4
Q ss_pred HHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCC
Q 010125 111 GEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI 190 (517)
Q Consensus 111 ~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~ 190 (517)
.+.+...+......|...++..++++.+.+|+.+.+|++... ....++|+|+++|+..++.+..+
T Consensus 43 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~----------- 107 (387)
T PRK07777 43 LEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP----DTEVLVTVGATEAIAAAVLGLVE----------- 107 (387)
T ss_pred HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhcC-----------
Confidence 344444443334567767788999999999999988875321 01589999999998766654321
Q ss_pred CCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc--
Q 010125 191 SKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKS-SSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD-- 267 (517)
Q Consensus 191 ~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~-~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id-- 267 (517)
+++.|++..++|..+..+++..|. +++.+|.+++ .++.+|+++|++++.+.+ .+|+++.++++||.+-
T Consensus 108 ~gd~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~ 178 (387)
T PRK07777 108 PGDEVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTPRT------RALIVNSPHNPTGTVLTA 178 (387)
T ss_pred CCCEEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCccc------EEEEEcCCCCCCCccCCH
Confidence 456688888999999999999999 9999998764 357899999999886543 3677788999999874
Q ss_pred -ChhHHHHHHHHhCCeEEcccccccccccCcccccc--ccCCCCCCeeeeccccccCC-CCcceEEEEeCchhHHhhhcC
Q 010125 268 -PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFA-TLDCCCLWVKDPRALVSSLST 343 (517)
Q Consensus 268 -pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~~~~~~~~~~~~~ 343 (517)
++++|+++|++||+++++|.+|+...+....+... +.+....+.+..+++|.++. ...+|+++..++ . .+.+..
T Consensus 179 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~~-l-~~~~~~ 256 (387)
T PRK07777 179 AELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPAP-L-IAAVRA 256 (387)
T ss_pred HHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCHH-H-HHHHHH
Confidence 58899999999999999999997655322111111 12223456778889999984 466788776432 2 222221
Q ss_pred CccccCCccccccccccCCCccccCCCCCCchHHHHHHHH--hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 010125 344 NPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRN--YGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHF 421 (517)
Q Consensus 344 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~--~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~ 421 (517)
...+... . . ......++... .+.+.++++.+...++++++.+.|++. ++++. +|+.
T Consensus 257 ~~~~~~~--------------~--~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~g 314 (387)
T PRK07777 257 AKQYLTY--------------V--G----GAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVH-DSAG 314 (387)
T ss_pred HHhhccc--------------C--C----CCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-CCCc
Confidence 1111110 0 0 11111111111 234556667778888999999999886 67765 4444
Q ss_pred eEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC-----CEeEEEEEecCCCCcH
Q 010125 422 AVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG-----GIYAIRFATGATLTEK 494 (517)
Q Consensus 422 ~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~-----g~~~lR~~~~~~~t~~ 494 (517)
+.+.| ++.+... ....++.+.|. +.|+...++..+. +..++|++++. .+
T Consensus 315 ~~~~~~~~~~~~~---------------------~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~---~~ 370 (387)
T PRK07777 315 TYFLCADPRPLGY---------------------DDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCK---RD 370 (387)
T ss_pred ceEEEecccccCC---------------------CCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecC---CH
Confidence 54443 4432110 01245666665 4576554444332 24589999953 57
Q ss_pred HHHHHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQQHL 508 (517)
Q Consensus 495 ~di~~l~~~l~~~~ 508 (517)
+++++.++.|.++.
T Consensus 371 ~~l~~~l~~l~~~~ 384 (387)
T PRK07777 371 DTLDEAIRRLRALR 384 (387)
T ss_pred HHHHHHHHHHHHHh
Confidence 79999998887754
No 103
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.85 E-value=5.9e-19 Score=183.20 Aligned_cols=297 Identities=13% Similarity=0.129 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG 213 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G 213 (517)
...++.+.+++++|.+ ..+++++|++||..++..++.. .++.+|+++...|.++..++...|
T Consensus 91 ~~~~Le~~la~~~g~~---------~~l~~~sG~~an~~ai~~l~~~---------~~~~~v~~~~~~h~s~~~~~~~~g 152 (402)
T TIGR01821 91 PHVELEAELADLHGKE---------SALVFTSGYVANDATLATLAKI---------IPGCVIFSDELNHASMIEGIRHSG 152 (402)
T ss_pred HHHHHHHHHHHHhCCC---------eEEEECchHHHHHHHHHHhhCC---------CCCCEEEEcchHhHHHHHHHHHcC
Confidence 3445556677777753 3577788899999888776532 045677777778999999988888
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccc
Q 010125 214 IDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 293 (517)
Q Consensus 214 ~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~ 293 (517)
. .++.++. .|+++|++.++... ...+.+|+++.+++++|.+.|+++|.++|++||++++||+||+.+.
T Consensus 153 ~---~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~ 220 (402)
T TIGR01821 153 A---EKFIFRH-------NDVAHLEKLLQSVD--PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGL 220 (402)
T ss_pred C---eEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCcccccc
Confidence 8 6666643 37788988886431 1134578889999999999999999999999999999999998443
Q ss_pred ccCcccccc--ccCC-CCCCeeeeccccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccccccccCCCccccCC
Q 010125 294 CICPEFRHF--IDGV-EGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLS-TNPEYLKNKATESMQVVDYKDWQITLS 369 (517)
Q Consensus 294 ~~~~~~~~~--~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~s 369 (517)
+ .+..... ..++ ...|.+..++.|.++.+. |+++.+ +.. .+.+. ....|.+ ..+
T Consensus 221 ~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G--G~i~~~-~~~-~~~l~~~~~~~~~-----------------t~~ 278 (402)
T TIGR01821 221 Y-GPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG--GYIAAS-RKL-IDAIRSYAPGFIF-----------------TTS 278 (402)
T ss_pred c-CCCCCccchhccCCCCCeEEEEechhhhccCC--ceeecC-HHH-HHHHHHhCcCcee-----------------cCc
Confidence 2 1211111 1122 346888889999998642 555443 332 22221 1111211 111
Q ss_pred CC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccc
Q 010125 370 RR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLS 448 (517)
Q Consensus 370 r~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 448 (517)
.. ....++.++++.+... ..+.++..++++++.+.|++. +++++ ++..+++.+.+. .
T Consensus 279 ~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~i~~~-~----------------- 336 (402)
T TIGR01821 279 LPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVI-PNPSHIVPVIIG-D----------------- 336 (402)
T ss_pred CCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeC-C-----------------
Confidence 11 1122333445443222 445556678999999999886 77765 345667666542 1
Q ss_pred hHHHHHHHHHHHHHHHHhc-CcEEEeee----eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 449 EEEQINEFNRELLESINAS-GKAYMTHA----VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 449 ~~~~~~~~~~~l~~~l~~~-g~~~~~~~----~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.....++.++|.++ |+ ++.+. ...+..++|+++. ...+++||++++++|+++.+++
T Consensus 337 -----~~~a~~~~~~L~~~~Gi-~v~~~~~p~~~~g~~~lRis~~-~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 337 -----AALCKKVSDLLLNKHGI-YVQPINYPTVPRGTERLRITPT-PAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred -----HHHHHHHHHHHHhcCCE-EEEeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 12245677777654 65 44332 2235568999984 5667889999999999887654
No 104
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.85 E-value=3.1e-20 Score=188.93 Aligned_cols=335 Identities=11% Similarity=-0.004 Sum_probs=215.4
Q ss_pred eCCCCCChHHHHHHHHHhcc----ccccccc---ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCce-EEcCCchHHH
Q 010125 99 YFPSSGSIAGFLGEMLSSGF----NIVGFNW---ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGG-VIQGTTCEAI 170 (517)
Q Consensus 99 ~~~~~~~~~~~~~~~l~~~~----n~~~~~~---~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g-~~t~ggt~a~ 170 (517)
+.|++...|..+.+.+...+ |.....+ .-++...++-+++.+.+++++|.++.. .. +++++||.++
T Consensus 7 ~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgt~~~ 80 (360)
T PRK05355 7 FSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNY------KVLFLQGGASLQF 80 (360)
T ss_pred ccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEEcCCchHHH
Confidence 44666666666655555443 1222222 234455688889999999999985432 34 4446666666
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHH-HHHHhHhcCC
Q 010125 171 LCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMA-QINSDVEVGL 249 (517)
Q Consensus 171 ~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~-~i~~~~~~g~ 249 (517)
-.+++..... +.+.++|..+...|.+ .+.++..|. . ..++.++ +.+..+..++++ +++++
T Consensus 81 Ea~~~nl~~~--------g~~~l~i~~G~fg~r~-~~~a~~~g~---~-~~~~~~~-~~g~~~~~~~~~~~l~~~----- 141 (360)
T PRK05355 81 AMVPMNLLGG--------GKKADYVDTGSWSKKA-IKEAKKYGE---V-NVAASSE-DDGFTYIPPLDEWQLSDD----- 141 (360)
T ss_pred HHHHHhcCCC--------CCeEEEEECCHHHHHH-HHHHHHhCC---c-eEEeccc-ccCCCCCCChhhccCCCC-----
Confidence 5555443221 1134556666666665 566677786 5 5555543 134555555555 56443
Q ss_pred cceEEEeeccCCcccccc-ChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceE
Q 010125 250 IPLFLCATIGTTAITAVD-PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC 328 (517)
Q Consensus 250 ~p~~vv~t~gtt~~G~id-pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~ 328 (517)
+.+|.+++..|+||... ||++| ||+.++||++.+.+....+- ...|.++++.||+++ |.|.|+
T Consensus 142 -~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv--------~~~d~~~~ssqK~lg-P~Glg~ 205 (360)
T PRK05355 142 -AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDV--------SKFGLIYAGAQKNIG-PAGLTI 205 (360)
T ss_pred -CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCH--------HHccEEEEecccccc-CCceEE
Confidence 34899999999999997 78777 89999999999888766542 145799999999986 999999
Q ss_pred EEEeCchhHHhhhcC-CccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHH
Q 010125 329 LWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVA-NLRHFLRSHVNMAKLFER 405 (517)
Q Consensus 329 l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~i~~~~~~a~~l~~ 405 (517)
++++++..- + ... .+.|+..... . .......+-. ....++..+++.+-.+ |++++.+++.++++++++
T Consensus 206 l~~s~~~l~-~-~~~~~~~~~~~~~~-----~--~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~ 276 (360)
T PRK05355 206 VIVREDLLG-R-ALPSIPSMLDYKTH-----A--DNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYD 276 (360)
T ss_pred EEECHHHHh-h-cccCCChHHHHHHH-----H--hcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHH
Confidence 999877542 1 211 1222221100 0 0000011111 2335777788888778 899999999999999999
Q ss_pred HHhcCCCeEEecC--CCe-eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeE
Q 010125 406 LVSGDKRFEIVFP--CHF-AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYA 482 (517)
Q Consensus 406 ~l~~~~~~~l~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~ 482 (517)
.|++++.+..+.+ ..+ .+++|.+... ....++++.+.++|.++ .... ...+.
T Consensus 277 ~l~~~~~~~~~~~~~~rs~~v~sf~~~~~-----------------------~~~~~~~~~~~~~Gi~~-~~~~-~~~g~ 331 (360)
T PRK05355 277 AIDSSDFYRNPVAPEDRSRMNVPFTLADE-----------------------ELDKKFLAEAKAAGLVG-LKGH-RSVGG 331 (360)
T ss_pred HHHhCCCcccCCChhhcCCcEEEEEcCCh-----------------------HHHHHHHHHHHHCCCcc-cCCC-CccCc
Confidence 9999864333322 234 4688886432 22355667777889875 2222 22357
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 483 IRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 483 lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
+|+|+. +.++.+||+++++.|+++..
T Consensus 332 vRiS~~-~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 332 MRASIY-NAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred EEEECC-CCCCHHHHHHHHHHHHHHHH
Confidence 999995 57788899999999998754
No 105
>PRK12414 putative aminotransferase; Provisional
Probab=99.85 E-value=2.9e-19 Score=184.28 Aligned_cols=328 Identities=11% Similarity=0.078 Sum_probs=211.2
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+...+......|....+...+.+.+++|+++++|.+... ....++|+|+++++..++.+..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~----~~~i~it~g~~~al~~~~~~l~~------- 112 (384)
T PRK12414 44 DPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP----ASEVTVIASASEGLYAAISALVH------- 112 (384)
T ss_pred CHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEECChHHHHHHHHHHhcC-------
Confidence 4445555544332223456666678899999999999999985210 01589999999988766655422
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|++.+++|..+...++..|+ +++.+|++.+ ++.+|++.|++++++.+ .+|+++.++|+||.+
T Consensus 113 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~~------~~v~i~~p~NPTG~~ 178 (384)
T PRK12414 113 ----PGDEVIYFEPSFDSYAPIVRLQGA---TPVAIKLSPE-DFRVNWDEVAAAITPRT------RMIIVNTPHNPSATV 178 (384)
T ss_pred ----CCCEEEEeCCCccchHHHHHHcCC---EEEEEecCcc-ccccCHHHHHhhcCccc------EEEEEcCCCCCCCcC
Confidence 556788889999999999999999 9999998753 57899999999886533 367788999999997
Q ss_pred ---cChhHHHHHHHHhCCeEEcccccccccccCccccccc--cCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhh
Q 010125 267 ---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSS 340 (517)
Q Consensus 267 ---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~ 340 (517)
+++++|+++|++||+|+++|++|.-+.+......... .....--.++.+++|.++ ....+|+++..++ .. +.
T Consensus 179 ~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~~-l~-~~ 256 (384)
T PRK12414 179 FSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAE-LM-DE 256 (384)
T ss_pred CCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCHH-HH-HH
Confidence 5789999999999999999999976443211111111 111122366777999996 5577898887533 22 22
Q ss_pred hcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 010125 341 LSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGV-ANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC 419 (517)
Q Consensus 341 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~ 419 (517)
+.....+. ......+..+++...+.. ..+.+..+...+.++++.+.|++. ++++. ++
T Consensus 257 l~~~~~~~--------------------~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~ 314 (384)
T PRK12414 257 IRKVHQFM--------------------VFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL-PS 314 (384)
T ss_pred HHHHHhhe--------------------ecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CC
Confidence 21110000 001122333444444321 234455667778888999999886 67764 56
Q ss_pred CeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--C--EeEEEEEecCCCCcH
Q 010125 420 HFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG--G--IYAIRFATGATLTEK 494 (517)
Q Consensus 420 ~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g--~~~lR~~~~~~~t~~ 494 (517)
..+++.| ++.+.. . ....+.+.+.+.+.|+.++++..+. + ..++|++++. ++
T Consensus 315 ~gg~~~~~~~~~~~----------------~----~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~---~~ 371 (384)
T PRK12414 315 EGSFFMLARFRHFS----------------D----ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSK---DD 371 (384)
T ss_pred CcceEEEEcccccC----------------C----CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecC---CH
Confidence 5666555 443210 0 0011223344556787766655442 2 4689999963 57
Q ss_pred HHHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQQ 506 (517)
Q Consensus 495 ~di~~l~~~l~~ 506 (517)
+++++.+++|.+
T Consensus 372 ~~~~~~~~rl~~ 383 (384)
T PRK12414 372 ATLVEGARRLCS 383 (384)
T ss_pred HHHHHHHHHHhh
Confidence 788888887764
No 106
>PRK08960 hypothetical protein; Provisional
Probab=99.85 E-value=4.4e-19 Score=183.19 Aligned_cols=328 Identities=13% Similarity=0.049 Sum_probs=209.6
Q ss_pred hHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 106 IAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 106 ~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+|..+.+.+...+......|....+..++++.+++|+.+..|++.. ....++|+|+++|+..++.+..+
T Consensus 46 ~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~it~G~~~al~~~~~~~~~------ 114 (387)
T PRK08960 46 TAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVD-----PERILVTPGGSGALLLASSLLVD------ 114 (387)
T ss_pred CCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCC-----hhhEEEccCcHHHHHHHHHHhcC------
Confidence 3555666666666444456777778889999999999988776432 13789999999998776654421
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++++++|.+....+...|. +++.+|++.++++.+|++.|++++++.+ .+++++.++|+||.
T Consensus 115 -----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~ 180 (387)
T PRK08960 115 -----PGKHWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGT 180 (387)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCc
Confidence 567788999999999999999998 9999999865567899999999887543 26777889999999
Q ss_pred ccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhh
Q 010125 266 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSL 341 (517)
Q Consensus 266 idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~ 341 (517)
+-+ +++|+++|++||+|+++|++|...... +...... .+..--.+..+++|.++ ....+|+++..+. .. +.+
T Consensus 181 ~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~-~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~~-~~-~~~ 256 (387)
T PRK08960 181 LLSRDELAALSQALRARGGHLVVDEIYHGLTYG-VDAASVL-EVDDDAFVLNSFSKYFGMTGWRLGWLVAPPA-AV-PEL 256 (387)
T ss_pred CcCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCChh-hccCCEEEEeecccccCCcccEEEEEEcCHH-HH-HHH
Confidence 866 567777899999999999999765431 1111111 12111245567999996 5566999887532 22 222
Q ss_pred cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 342 STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 342 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
.....+. ... ...+...++...+ ..+.+.+..+...+.++.+.+.|++. ++.+...
T Consensus 257 ~~~~~~~----------------~~~----~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~ 315 (387)
T PRK08960 257 EKLAQNL----------------YIS----ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVE 315 (387)
T ss_pred HHHHhhh----------------ccC----CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcC
Confidence 1110000 000 0122222222222 12445556666777888889999876 5654334
Q ss_pred CCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC---CEeEEEEEecCCCCc
Q 010125 419 CHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG---GIYAIRFATGATLTE 493 (517)
Q Consensus 419 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~---g~~~lR~~~~~~~t~ 493 (517)
|..+++.| ++.... ....++.+++. +.|+...++..+. +..++|++++. +
T Consensus 316 p~g~~f~~~~~~~~~----------------------~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~---~ 370 (387)
T PRK08960 316 PQGAFYLYADISAFG----------------------GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ---S 370 (387)
T ss_pred CCeeEEEEEeccccC----------------------CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC---C
Confidence 54444433 332110 01245555554 4676655444442 23589999963 4
Q ss_pred HHHHHHHHHHHHHHH
Q 010125 494 KRHVVVAWTVVQQHL 508 (517)
Q Consensus 494 ~~di~~l~~~l~~~~ 508 (517)
.+.+..+++.|.++.
T Consensus 371 ~~~l~~al~~l~~~~ 385 (387)
T PRK08960 371 LPRLQEAVERIARGL 385 (387)
T ss_pred HHHHHHHHHHHHHHH
Confidence 567777777666543
No 107
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.85 E-value=3.4e-20 Score=184.00 Aligned_cols=228 Identities=13% Similarity=0.074 Sum_probs=155.2
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCC
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
+++.+.+++++|.+.. .++++|+|+++..++.+... +++.|+++..+|.|+..++...|+
T Consensus 62 ~~~~~~~A~~~ga~~~--------~~~~~Gst~a~~~~l~al~~-----------~gd~Vlv~~~~h~s~~~~~~~~g~- 121 (294)
T cd00615 62 KEAQELAARAFGAKHT--------FFLVNGTSSSNKAVILAVCG-----------PGDKILIDRNCHKSVINGLVLSGA- 121 (294)
T ss_pred HHHHHHHHHHhCCCCE--------EEEcCcHHHHHHHHHHHcCC-----------CCCEEEEeCCchHHHHHHHHHCCC-
Confidence 4455778888887643 35688889999877765532 667899999999999999999998
Q ss_pred CCCEEEEecCCCCC----cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccc
Q 010125 216 VKNFRAIKTTKSSS----YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 291 (517)
Q Consensus 216 ~~~v~~vp~d~~~~----~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~ 291 (517)
+++.++.+.+++ +.+|+++|++++++.. .+.+|+++.+ |++|.+.|+++|+++|++||++++||+||++
T Consensus 122 --~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~ 194 (294)
T cd00615 122 --VPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGA 194 (294)
T ss_pred --EEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchh
Confidence 899988764332 4799999999997532 2447777777 5799999999999999999999999999987
Q ss_pred ccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC
Q 010125 292 SACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR 371 (517)
Q Consensus 292 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 371 (517)
.+.+.+...... ...++|+++.++||++.++.++|++++++.......+.... ++.. ..+..
T Consensus 195 ~~~~~~~~~~~~-~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~-~~~~----------------ttsps 256 (294)
T cd00615 195 HFRFHPILPSSA-AMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEAL-NLHQ----------------STSPS 256 (294)
T ss_pred hhccCcccCcch-hhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHH-HHHC----------------CCCcH
Confidence 654433222111 11379999999999998888888888876521111111000 0000 01111
Q ss_pred C-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010125 372 F-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG 409 (517)
Q Consensus 372 ~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~ 409 (517)
. ...++-.+++.+..+| .+.+++..++++++++.|++
T Consensus 257 ~~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 257 YLILASLDVARAMMALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 1 1123333344333344 44678888899999888753
No 108
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.85 E-value=8.2e-19 Score=181.57 Aligned_cols=313 Identities=12% Similarity=0.091 Sum_probs=198.2
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC
Q 010125 122 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT 201 (517)
Q Consensus 122 ~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~ 201 (517)
...|....+..++++++++|+.+.+|.+-+. ....++|+|+++++..++.+..+ +++.|++++++
T Consensus 66 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~i~vt~G~~~al~~~~~~~~~-----------~gd~Vlv~~P~ 130 (394)
T PRK05942 66 NHGYPPFEGTASFRQAITDWYHRRYGVELDP----DSEALPLLGSKEGLTHLALAYVN-----------PGDVVLVPSPA 130 (394)
T ss_pred CccCCCCCCCHHHHHHHHHHHHHHHCCCcCC----CCeEEEccChHHHHHHHHHHhCC-----------CCCEEEEcCCC
Confidence 3466655667899999999999988864221 01377899999988776654422 56778999999
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHH
Q 010125 202 HCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQ 278 (517)
Q Consensus 202 H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~ 278 (517)
|..+..++...|+ +++.+|++.++++.+|+++|++.+.+.+ .+|+++.++|+||.+-+ +++|+++|++
T Consensus 131 y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~ 201 (394)
T PRK05942 131 YPAHFRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQQA------KILYFNYPSNPTTATAPREFFEEIVAFARK 201 (394)
T ss_pred CcchHHHHHHcCC---EEEEeecCCccCCccCHHHHHHhccccc------eEEEEcCCCCCCCCcCCHHHHHHHHHHHHH
Confidence 9999888899999 9999999865567899999999886543 37777889999999976 8899999999
Q ss_pred hCCeEEcccccccccccCcccccc--ccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccc
Q 010125 279 FGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATES 355 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 355 (517)
||+|+++|++|+.+.......... +.+.........++.|.++ .+..+|+++.. +... +.+.....++.
T Consensus 202 ~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~-~~l~-~~l~~~~~~~~------ 273 (394)
T PRK05942 202 YEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN-RHII-QGLRTLKTNLD------ 273 (394)
T ss_pred cCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC-HHHH-HHHHHHHhhcc------
Confidence 999999999997654321111111 1111223345667899885 55778998764 3332 23321111110
Q ss_pred cccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEE-EEEecCCCcc
Q 010125 356 MQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVV-CFRVSPSPVL 434 (517)
Q Consensus 356 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v-~f~~~~~~~~ 434 (517)
++. + ......+-.+++ ...+.+++..++..++.+++.+.|++. ++++. +|+.+++ .+++.+. .
T Consensus 274 --------~~~--~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~f~~~~~~~~-~- 337 (394)
T PRK05942 274 --------YGI--F-SALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP-PTKATMYLWVPCPVG-M- 337 (394)
T ss_pred --------cCC--C-HHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeeEEEEECCCC-C-
Confidence 000 0 001111122222 234556677777788888899999876 67665 5555643 4444321 0
Q ss_pred hhhhhhhhhccccchHHHHHHHHHHHHHH-HHhcCcEEEeeeeE--CCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 435 MDKLKTKYVNCLLSEEEQINEFNRELLES-INASGKAYMTHAVL--GGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
+ ..++..+ +.+.|+....+..+ .+..++|+++.. +.+.+.+.++.|.+
T Consensus 338 --------------~-------~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~---~~~~l~~~l~~l~~ 388 (394)
T PRK05942 338 --------------G-------STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIA---DCDRLGEALDRLKQ 388 (394)
T ss_pred --------------C-------HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecC---CHHHHHHHHHHHHH
Confidence 0 1233333 44567765554444 235799999952 34455555555544
No 109
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.85 E-value=6.6e-19 Score=195.41 Aligned_cols=367 Identities=11% Similarity=0.011 Sum_probs=230.5
Q ss_pred hhhHhhhCCCCCCC--CCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcc--cccccccc--cC
Q 010125 55 PGYLQKVLPESAPN--NPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGF--NIVGFNWI--SS 128 (517)
Q Consensus 55 ~~~l~~~~~~~~p~--~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~--n~~~~~~~--~s 128 (517)
|..++.. +..+|. .+.+..++++++.+....+.. +..|.|--.-+--.|+.+-+.+.+.. -+..+.|. .+
T Consensus 68 P~~i~~~-~l~lp~~~~~~sE~e~~~~~~~la~kN~~---~~~fiG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEis 143 (993)
T PLN02414 68 PKSIRLD-SMKLSKYDEGLTESQMLEHMKSLASKNKV---FKSYIGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIA 143 (993)
T ss_pred CHHHhcC-CCCCCCCCCCCCHHHHHHHHHHHHhcCCc---cccccCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHH
Confidence 4445322 445672 478999999999987666543 22333311111224445533333221 12223343 23
Q ss_pred hhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHH
Q 010125 129 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKA 208 (517)
Q Consensus 129 p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ka 208 (517)
.+.-+.-.+...++++|+|++.+ +..++.++|.+...++++.+-. + | ++..|++++..|++....
T Consensus 144 QG~lqal~~~Qt~ia~LtG~~~a-------naSL~d~aTAaaea~~~a~~~~---~-g----~~~~VlVs~~~hP~~~~v 208 (993)
T PLN02414 144 QGRLESLLNYQTMITDLTGLPMS-------NASLLDEGTAAAEAMAMCNNIL---K-G----KKKKFLIASNCHPQTIDV 208 (993)
T ss_pred HHHHHHHHHHHHHHHHHhCCChh-------hEeecCChHHHHHHHHHHHhcc---c-C----CCCEEEEcCccCHhHHHH
Confidence 44444445677999999999876 7899999998776444433211 0 1 346799999999987654
Q ss_pred H----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 209 A----QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 209 a----~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
+ +-.|+ +|+.+|.+. .+ ...+ ..+.++ +.-.+.+|.+.|+++|+++||++|++++
T Consensus 209 ~~t~a~~~Gi---eV~~v~~~~-----~~------~~~~------~v~~vl-vq~P~~~G~v~dv~~I~~~ah~~GaL~i 267 (993)
T PLN02414 209 CQTRADGLGL---EVVVADEKD-----FD------YSSG------DVCGVL-VQYPATDGEVLDYAEFVKNAHANGVKVV 267 (993)
T ss_pred HHHhhhhcCC---EEEEecchh-----hc------cccC------ceEEEE-EecCCCCeEEcCHHHHHHHHHHcCCEEE
Confidence 4 45688 899998742 11 0011 122344 4444568999999999999999999999
Q ss_pred cccccccccccCccccccccCCCCCCeeeecccccc-----CCCCcceEEEEeCchhHHhhhcCCcc-ccCCcccccccc
Q 010125 285 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWF-----FATLDCCCLWVKDPRALVSSLSTNPE-YLKNKATESMQV 358 (517)
Q Consensus 285 vDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l-----~~p~~~g~l~~~~~~~~~~~~~~~~~-yl~~~~~~~~~~ 358 (517)
| +|+..+.......... +||+++.+.|||+ ++|. +|++++++.. .+. .|+ .+... .+..+.
T Consensus 268 V-aad~lal~~l~~pge~-----GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~--~r~---~PgriVG~s-~d~~g~ 334 (993)
T PLN02414 268 M-ATDLLALTMLKPPGEW-----GADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY--KRL---MPGRIIGVS-VDSSGK 334 (993)
T ss_pred E-EECHHHhcCCCCHhhc-----cCcEEEECCCccccCCCCCCCC-eeEEEECHHH--Hhh---CCCcccCcc-cCCCCC
Confidence 9 8887766655333322 8999999999998 4444 8999998753 222 232 22221 111111
Q ss_pred ccCC---CccccCCCCC-------CchHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeE
Q 010125 359 VDYK---DWQITLSRRF-------RSLKLWFVI-----RNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAV 423 (517)
Q Consensus 359 ~~~~---~~~~~~sr~~-------~al~~~~~l-----~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~ 423 (517)
..+. ..-.+-.||- ...++++++ ..+|..|++++.++...++.++++.|++. ++++..++.+.+
T Consensus 335 ~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~~~f~~ 413 (993)
T PLN02414 335 PALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSLPFFDT 413 (993)
T ss_pred cccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCCCCcCe
Confidence 1110 0011111221 123444444 24588999999999999999999999874 799887888889
Q ss_pred EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 010125 424 VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTV 503 (517)
Q Consensus 424 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~ 503 (517)
|+|++. . ..++.++|.++|+.. .. .. ...+|+|+ +..+|++||++++++
T Consensus 414 vt~~~~-~-------------------------~~~v~~~L~~~gI~l-~~--~~-~~~lrvs~-~e~~T~edId~L~~~ 462 (993)
T PLN02414 414 VKVKCS-D-------------------------ADAIADAAAKVGINL-RV--VD-ANTVTVSF-DETTTLEDVDKLFKV 462 (993)
T ss_pred EEEecC-C-------------------------HHHHHHHHHHCCCee-EE--ec-CCeEEEEe-eccCCHHHHHHHHHH
Confidence 999863 2 256777777888732 22 11 23699998 578888999999999
Q ss_pred HHH
Q 010125 504 VQQ 506 (517)
Q Consensus 504 l~~ 506 (517)
|..
T Consensus 463 l~~ 465 (993)
T PLN02414 463 FAG 465 (993)
T ss_pred Hcc
Confidence 964
No 110
>PRK09082 methionine aminotransferase; Validated
Probab=99.85 E-value=2.2e-19 Score=185.41 Aligned_cols=325 Identities=11% Similarity=0.060 Sum_probs=213.3
Q ss_pred HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 108 GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 108 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
..+.+.+...+......|....+...+++.+++|+.+++|.+... ....++|+|+++|+..++.+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~----~~~i~~t~G~~~al~~~~~~~~~-------- 113 (386)
T PRK09082 46 PYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA----DSEITVTAGATEALFAAILALVR-------- 113 (386)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCHHHHHHHHHHHHcC--------
Confidence 345555555554334467666778899999999999999875321 01588999999998877765432
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc-
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV- 266 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i- 266 (517)
+++.|++..++|.++..+++..|. +++.+|++.+ ++.+|++++++++++.+ .+|+++.++++||.+
T Consensus 114 ---~gd~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~~~ 180 (386)
T PRK09082 114 ---PGDEVIVFDPSYDSYAPAIELAGG---RAVRVALQPP-DFRVDWQRFAAAISPRT------RLIILNTPHNPSGTVW 180 (386)
T ss_pred ---CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcc-cccCCHHHHHHhcCccc------eEEEEeCCCCCCCcCC
Confidence 566788899999999999999999 9999999753 58999999999986533 367778899999977
Q ss_pred --cChhHHHHHHHHhCCeEEcccccccccccCcccccc--ccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhh
Q 010125 267 --DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSL 341 (517)
Q Consensus 267 --dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~ 341 (517)
+++++|.++|++||+++++|.+|+...+........ +.+...-..+..+++|.++ ....+|+++.. ++.. ..+
T Consensus 181 ~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~-~~~ 258 (386)
T PRK09082 181 SAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AALS-AEF 258 (386)
T ss_pred CHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHHH-HHH
Confidence 778999999999999999999997654422111111 1222233466678999996 44668888764 3322 222
Q ss_pred cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 010125 342 STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC 419 (517)
Q Consensus 342 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~ 419 (517)
.....+.. .....+..+++...+ ..+.++++.+.+.++++++.+.|++. ++++. ++
T Consensus 259 ~~~~~~~~--------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~ 316 (386)
T PRK09082 259 RKVHQYNT--------------------FTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLL-PC 316 (386)
T ss_pred HHHHhhhc--------------------CCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CC
Confidence 11111100 001222222222222 34556666677788889999999875 67764 55
Q ss_pred CeeEEEE-EecC-CCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC----CEeEEEEEecCCCC
Q 010125 420 HFAVVCF-RVSP-SPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG----GIYAIRFATGATLT 492 (517)
Q Consensus 420 ~~~~v~f-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~----g~~~lR~~~~~~~t 492 (517)
+.+.+.+ ++.. .. ....++.+.|. +.|+.+.++..+. +..++|++++.
T Consensus 317 ~g~~~~~~~~~~~~~----------------------~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~--- 371 (386)
T PRK09082 317 EGTYFQLVDYSAISD----------------------LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAK--- 371 (386)
T ss_pred CeeEEEEEeccccCC----------------------CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecC---
Confidence 6665444 5431 11 01234555543 5566554444342 24689999963
Q ss_pred cHHHHHHHHHHHHH
Q 010125 493 EKRHVVVAWTVVQQ 506 (517)
Q Consensus 493 ~~~di~~l~~~l~~ 506 (517)
+++++++.+++|++
T Consensus 372 ~~~~l~~~~~rl~~ 385 (386)
T PRK09082 372 QEETLDAAAERLCQ 385 (386)
T ss_pred CHHHHHHHHHHHhh
Confidence 57788888888764
No 111
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.85 E-value=5.6e-19 Score=183.28 Aligned_cols=342 Identities=11% Similarity=0.048 Sum_probs=214.4
Q ss_pred HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 108 GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 108 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
..+.+.+...+......|....+..++.+.+.+|+.+.+|.+.. ....++|+|+++|+..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~~~~-------- 115 (402)
T PRK06107 49 DHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYA-----DNEITVGGGAKQAIFLALMATLE-------- 115 (402)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----hhhEEEeCCHHHHHHHHHHHhcC--------
Confidence 44556666655433445666667788999999999998887532 13689999999998777654321
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD 267 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id 267 (517)
+++.|++++++|.....++...|. .++.++++.++++.+|+++|++++.+.+ .+|+++.++|+||.+-
T Consensus 116 ---~gd~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~ 183 (402)
T PRK06107 116 ---AGDEVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPEALEAAITPRT------RWLILNAPSNPTGAVY 183 (402)
T ss_pred ---CCCEEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCcCc------eEEEEECCCCCCCcCc
Confidence 566788888888777787888887 7888888644457899999999886432 3677888999999875
Q ss_pred C---hhHHHHHHHHh-CCeEEcccccccccccCccccccc---cCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHh
Q 010125 268 P---LKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFI---DGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVS 339 (517)
Q Consensus 268 p---l~eI~~i~~~~-gi~lhvDaA~g~~~~~~~~~~~~~---~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~ 339 (517)
+ +++|+++|++| |+++++|.+|+...+......... .+...--.+..+++|.++ ....+|+++... .. .+
T Consensus 184 s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~-~~-~~ 261 (402)
T PRK06107 184 SRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA-DL-IA 261 (402)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH-HH-HH
Confidence 4 67788889998 999999999975433211111111 111112244556899997 556688887643 22 22
Q ss_pred hhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 340 SLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 340 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
.+.....+.. .....+...++.+.+ +...+++..+.+.++++.+.+.|++++++++.
T Consensus 262 ~~~~~~~~~~--------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~- 320 (402)
T PRK06107 262 AINKLQSQSS--------------------SCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCL- 320 (402)
T ss_pred HHHHHHHhcc--------------------cCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-
Confidence 2221111110 011223334444443 34456666777788888899999887777764
Q ss_pred CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeECCEeEEEEEecCCCCcHHH
Q 010125 418 PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI-NASGKAYMTHAVLGGIYAIRFATGATLTEKRH 496 (517)
Q Consensus 418 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~d 496 (517)
+|+.+.+.|-..+.-. .. ..+. .. .......+.+.+ .+.|+...++..+....++|++++. ++++
T Consensus 321 ~p~gg~~~~~~~~~~~-~~----~~~~----~~--~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~---~~e~ 386 (402)
T PRK06107 321 VPDGAFYLYVNCAGLI-GK----TTPE----GK--VLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIAT---SLET 386 (402)
T ss_pred CCCcceEEeeeccccc-cc----cccc----cc--CCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCC---CHHH
Confidence 5555655443211000 00 0000 00 000123444444 4568766666555445799999964 5789
Q ss_pred HHHHHHHHHHHHHHH
Q 010125 497 VVVAWTVVQQHLEAF 511 (517)
Q Consensus 497 i~~l~~~l~~~~~~l 511 (517)
++++++.|.++.+++
T Consensus 387 l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 387 LEEACARIERAVAAL 401 (402)
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999998877654
No 112
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=8.9e-19 Score=182.29 Aligned_cols=296 Identities=11% Similarity=0.103 Sum_probs=188.8
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCC
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
.++.+.+++++|.+ ..+++++|++||..++...... .++.+|+++...|.++..+++..|.
T Consensus 94 ~~Le~~la~~~g~~---------~~i~~~sG~~a~~~~i~~l~~~---------~~g~~vi~~~~~h~s~~~~~~~~g~- 154 (410)
T PRK13392 94 VLLERELADLHGKE---------SALLFTSGYVSNDAALSTLGKL---------LPGCVILSDALNHASMIEGIRRSGA- 154 (410)
T ss_pred HHHHHHHHHHhCCC---------CEEEECcHHHHHHHHHHHHhcC---------CCCCEEEEehhhhHHHHHHHHHcCC-
Confidence 34556677888854 2466667788888777643211 0445788887899999999888888
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccccc
Q 010125 216 VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 295 (517)
Q Consensus 216 ~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~ 295 (517)
+++.++.+ |.+.+++.++... ...+.+|+++.+++++|.+-|+++|.++|++||+++++|+||+.+.+.
T Consensus 155 --~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~~~g~~g 223 (410)
T PRK13392 155 --EKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVHAVGLYG 223 (410)
T ss_pred --eEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCccccCcC
Confidence 77777532 5667777775432 123458889999999999999999999999999999999999844431
Q ss_pred Cccccccc--cC-CCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-
Q 010125 296 CPEFRHFI--DG-VEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR- 371 (517)
Q Consensus 296 ~~~~~~~~--~g-~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~- 371 (517)
+...... .+ .++.|.++.+++|+++.+. |++.. ++...........+|... .+..
T Consensus 224 -~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s-----------------~~~~~ 282 (410)
T PRK13392 224 -ARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFT-----------------TALPP 282 (410)
T ss_pred -CCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhcc-----------------CcCCH
Confidence 1111111 11 2457888889999998752 55544 333322111112222211 1111
Q ss_pred CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHH
Q 010125 372 FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEE 451 (517)
Q Consensus 372 ~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (517)
..+..+..+++... ......++..++++++.+.|++. ++++. ++..+++.+.+. .
T Consensus 283 ~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~-~-------------------- 337 (410)
T PRK13392 283 AVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVG-D-------------------- 337 (410)
T ss_pred HHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeC-C--------------------
Confidence 11233344555432 22345577788899999999886 77765 456666655542 2
Q ss_pred HHHHHHHHHHHHHH-hcCcEEEeee----eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 452 QINEFNRELLESIN-ASGKAYMTHA----VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 452 ~~~~~~~~l~~~l~-~~g~~~~~~~----~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.....++.++|. ++|+. +.+. ...+..++|+++. ...+++|+++++++|+++.+++
T Consensus 338 --~~~~~~~~~~L~~~~GI~-v~~~~~p~~~~~~~~lRis~~-~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 338 --PTLCKAISDRLMSEHGIY-IQPINYPTVPRGTERLRITPT-PLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred --HHHHHHHHHHHHHhCCEE-EeeeCCCCCCCCCceEEEEEC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 122456777775 45754 3332 2235578999985 4557779999999999886653
No 113
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.1e-18 Score=180.89 Aligned_cols=338 Identities=9% Similarity=-0.023 Sum_probs=218.6
Q ss_pred HHHHHHHHhccc-ccccccccChhhHHHHHHHHHHHHHHcCCC-cccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 108 GFLGEMLSSGFN-IVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 108 ~~~~~~l~~~~n-~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
..+.+.+...+. .....|.. .+...+.+.+++|+.+..|++ -+. ...+++|+|+++++..++.+..+
T Consensus 60 ~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~----~~~I~it~Gs~~al~~~~~~~~~------ 128 (410)
T PRK06290 60 ESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDP----VTEVIHSIGSKPALAMLPSCFIN------ 128 (410)
T ss_pred HHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCC----cceEEEccCHHHHHHHHHHHhCC------
Confidence 344444444332 22234543 678899999999999888865 221 01588999998887666554422
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++..++|..+...++..|+ +++.+|+++++++.+|+++|++++.+.+ .+|+++.++||||.
T Consensus 129 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NPTG~ 194 (410)
T PRK06290 129 -----PGDVTLMTVPGYPVTGTHTKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKEKA------KLLYLNYPNNPTGA 194 (410)
T ss_pred -----CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecCCCcCCcCCHHHHHHhhcccc------eEEEEECCCCCCCc
Confidence 566788888999999999999999 9999999876568889999998886533 37888889999999
Q ss_pred ccC---hhHHHHHHHHhCCeEEcccccccccccCccccccc--cCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHh
Q 010125 266 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVS 339 (517)
Q Consensus 266 idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~ 339 (517)
+-+ +++|.++|++||+|+++|.+|+.+.... ...... .+....+.+.-++.|.++ ....+|+++.. +... .
T Consensus 195 v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~-~~l~-~ 271 (410)
T PRK06290 195 VATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN-ELIV-K 271 (410)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC-CCcChhcCCCccccEEEEeechhhcCCchhheEeEEeC-HHHH-H
Confidence 966 6888888999999999999998654321 111111 112234577788999996 55678887753 3322 2
Q ss_pred hhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 340 SLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 340 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
.+.....+.. .. ...+...++...+. .+.+++..++..++++++.+.|++. ++.+. +
T Consensus 272 ~l~~~~~~~~----------------~~----~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 329 (410)
T PRK06290 272 AFATVKDNND----------------SG----QFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAE-M 329 (410)
T ss_pred HHHHHHhccc----------------cC----CcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-C
Confidence 2211111100 00 01122222333331 2345566777788889999999887 77754 5
Q ss_pred CCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHH
Q 010125 419 CHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 419 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 497 (517)
|+.+++.| ++.+...+ ... .....++.++|.++|.+.+.+..-. ..++|++++.+..++++.
T Consensus 330 p~g~f~l~v~lp~~~~~------------~~~----~~~~~~~~~~Ll~~~~v~~~p~~~~-~~~lRi~~~~~~~~~~~~ 392 (410)
T PRK06290 330 PGGTFYLYVKAPKGTKS------------GIK----FENAEEFSQYLIKEKLISTVPWDDA-GHFLRFSVTFEAKDEEEE 392 (410)
T ss_pred CCeeeEEEEECCCcccc------------CCC----CCCHHHHHHHHHHhCCEEEECCccc-cCeEEEEEEcccccccch
Confidence 66666655 44321000 000 0013467788877776654332211 258999998888888999
Q ss_pred HHHHHHHHHHHHHHH
Q 010125 498 VVAWTVVQQHLEAFQ 512 (517)
Q Consensus 498 ~~l~~~l~~~~~~l~ 512 (517)
++++++|.+...++.
T Consensus 393 ~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 393 DRILEEIKRRLSDVE 407 (410)
T ss_pred hHHHHHHHHHHhhcc
Confidence 999999988876653
No 114
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.85 E-value=1.1e-18 Score=194.68 Aligned_cols=365 Identities=14% Similarity=0.104 Sum_probs=227.8
Q ss_pred ChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHH-HHHh-----ccccccccccc
Q 010125 54 EPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGE-MLSS-----GFNIVGFNWIS 127 (517)
Q Consensus 54 ~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~l~~-----~~n~~~~~~~~ 127 (517)
-|..++..-+..+|+ +.+..++++++.+.-..+.. ...|.|--.-+...|+++.+ .+.. .+.++.. +.
T Consensus 42 iP~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~--Ei 115 (954)
T PRK05367 42 VPASIRLAEPLDLPA-ALSEAEALAELRAIASKNKV---FRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQP--EI 115 (954)
T ss_pred CCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---CCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCCh--HH
Confidence 355665444456775 58999999999987666643 22343321112234454422 2221 1222221 23
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
|.+.-+.-.+...+++++.|++.. +..++.++|.+...+++ ++... + + .+..|++++..|++...
T Consensus 116 sQG~Leal~~~Qt~la~LtG~~~a-------naSl~d~aTAa~ea~~~-a~~~~-~--~----~~~~vlv~~~~hP~~~~ 180 (954)
T PRK05367 116 SQGRLEALLNFQTMVADLTGLEIA-------NASLLDEATAAAEAMAL-AKRVS-K--S----KSNRFFVDDDVHPQTLD 180 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCCChh-------hccccccHHHHHHHHHH-hhhhc-c--C----CCCEEEEcCccCHHHHH
Confidence 444444445677999999999976 67889998877654333 33221 0 0 13579999999988664
Q ss_pred H----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 208 A----AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 208 a----a~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
. ++..|+ +|+.+|.+. + ++ .++ .+.++.+. .+.+|.+.|+++|+++||++|+++
T Consensus 181 v~~t~a~~~G~---ev~~~~~~~--d--~~--------~~~------~~~vlvq~-p~~~G~i~d~~~i~~~ah~~Gal~ 238 (954)
T PRK05367 181 VLRTRAEPLGI---EVVVGDAAK--A--LD--------HDD------VFGVLLQY-PGTSGEVRDYTALIAAAHARGALV 238 (954)
T ss_pred HHHHHHHhCCC---EEEEecCcc--C--CC--------ccc------EEEEEEec-CCCCeeeccHHHHHHHHHHcCCEE
Confidence 3 566788 999998753 1 11 111 23455555 567899999999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeecccccc-----CCCCcceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWF-----FATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l-----~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
+||+.+.+..+..+ ... -+||+++.+.|||+ ++| ++|++++|+. +.+.+ ++-+.+...+..+.
T Consensus 239 ~vda~~~Al~~l~~-pge-----~GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~--~~r~l---pgrivG~s~d~~g~ 306 (954)
T PRK05367 239 AVAADLLALTLLTP-PGE-----MGADIAVGSAQRFGVPMGFGGP-HAAYFAVRDA--YKRSM---PGRIVGVSVDAAGN 306 (954)
T ss_pred EEEehhhhccCCCC-hhh-----cCCCEEEeeCcccCCCCCCCCC-CEEEEEECHH--HHhhC---CCCeeeeecccCCC
Confidence 99996633333222 122 28999999999994 444 4999999865 22222 22221111111111
Q ss_pred ccCCCcccc----CCCCC-------CchHHHH-----HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 010125 359 VDYKDWQIT----LSRRF-------RSLKLWF-----VIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFA 422 (517)
Q Consensus 359 ~~~~~~~~~----~sr~~-------~al~~~~-----~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~ 422 (517)
..+. +.++ --||- .+..+++ .+..+|.+|++++.++...++.++++.|++ +|+++..++.+.
T Consensus 307 ~~~~-lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~~~~f~ 384 (954)
T PRK05367 307 PALR-LALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVHDSFFD 384 (954)
T ss_pred cccc-cccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCCCCCCC
Confidence 1110 1111 11221 1112222 235579999999999999999999999977 589988777778
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWT 502 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~ 502 (517)
.++|++... ..++.++|.++|+.. . .. ....+|+|+ +..+|++||+++++
T Consensus 385 ~~~~~~~~~-------------------------~~~i~~~l~~~gi~~-~--~~-~~~~l~is~-~e~~t~~did~l~~ 434 (954)
T PRK05367 385 TLTVEVGGD-------------------------AAAVLARALAAGINL-R--RV-DDDHVGISL-DETTTREDLAALLA 434 (954)
T ss_pred eEEEeCCCC-------------------------HHHHHHHHHHCCcee-c--cc-cCCEEEEEe-cccCCHHHHHHHHH
Confidence 888885311 356777787888754 1 11 124699998 56888899999999
Q ss_pred HHH
Q 010125 503 VVQ 505 (517)
Q Consensus 503 ~l~ 505 (517)
.|.
T Consensus 435 ~l~ 437 (954)
T PRK05367 435 VFG 437 (954)
T ss_pred HHc
Confidence 996
No 115
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.85 E-value=9.5e-19 Score=184.95 Aligned_cols=325 Identities=12% Similarity=0.067 Sum_probs=209.5
Q ss_pred ccccChhhHHHHHHHHHHHHHHcC----CCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCC
Q 010125 124 NWISSPAATELENIVMDWLGQMLK----LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSD 199 (517)
Q Consensus 124 ~~~~sp~~~~lE~~v~~~l~~l~g----~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~ 199 (517)
.|....+..++.+++++|+.+..| ++++ .+++|+|+++|+..++.+..+ +++.|++..
T Consensus 89 ~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-------~Ivit~Ga~~al~~l~~~l~~-----------pGD~Vlv~~ 150 (496)
T PLN02376 89 NFQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-------RVVMSGGATGANETIMFCLAD-----------PGDVFLIPS 150 (496)
T ss_pred ccCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-------hEEEccchHHHHHHHHHHhCC-----------CCCEEEECC
Confidence 344455678899999999999887 4443 789999999998777665533 667799999
Q ss_pred CCchHHHHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHH
Q 010125 200 QTHCALQKAAQ-IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDV 275 (517)
Q Consensus 200 ~~H~s~~kaa~-~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i 275 (517)
++|..+...+. ..|+ +++.||++.++++.+|+++++++++...+.+..+.+|+++.++||||.+-+ +++|+++
T Consensus 151 P~Y~~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~ 227 (496)
T PLN02376 151 PYYAAFDRDLRWRTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRF 227 (496)
T ss_pred CCccchHHHHHhhCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHH
Confidence 99999998777 4899 999999975556899999999887654444445667888899999999866 6778889
Q ss_pred HHHhCCeEEcccccccccccCccccccccCCC-------CCC--eeeeccccccC-CCCcceEEEEeCchhHHhhhcCCc
Q 010125 276 AKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-------GAD--SFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNP 345 (517)
Q Consensus 276 ~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~-------~aD--si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~ 345 (517)
|++||+++++|.+|+...+..+.+.....-+. ..+ .+..+++|.++ ..+.+|+++..++... .......
T Consensus 228 a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~-~~~~~~~ 306 (496)
T PLN02376 228 VTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVV-SCARKMS 306 (496)
T ss_pred HHHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHH-HHHHHHh
Confidence 99999999999999876543322222111111 112 23578999996 5588999998655432 2221111
Q ss_pred cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHH-----HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 010125 346 EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVAN-----LRHFLRSHVNMAKLFERLVSGDKRFEIVFPCH 420 (517)
Q Consensus 346 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g-----~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~ 420 (517)
.+. ....+..+++...+.... +.+..++..+..+.+.+.|++. +++++ ++.
T Consensus 307 ~~~----------------------~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~-~~~ 362 (496)
T PLN02376 307 SFG----------------------LVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACL-TSN 362 (496)
T ss_pred hcC----------------------CCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCC
Confidence 110 002233333333332222 2333455666777788888775 67665 455
Q ss_pred eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeEC--CEeEEEEEecCCCCcHHHH
Q 010125 421 FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINAS-GKAYMTHAVLG--GIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 421 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di 497 (517)
.++++|.-.+.... +. ...+...++.+.+.++ |+.+.++..+. +.+++|+|+.+ .+++.+
T Consensus 363 aG~flwi~l~~~~~--------------~~-~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~--~~~~~l 425 (496)
T PLN02376 363 AGLFAWMDLRHLLR--------------DR-NSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN--MDDDTL 425 (496)
T ss_pred ceEEEEEEchhhhc--------------cC-CchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC--CCHHHH
Confidence 55554432222100 00 0001124556666554 76555554442 35799999964 346789
Q ss_pred HHHHHHHHHHHHHH
Q 010125 498 VVAWTVVQQHLEAF 511 (517)
Q Consensus 498 ~~l~~~l~~~~~~l 511 (517)
+..+++|.++..+.
T Consensus 426 ~~al~rl~~~l~~~ 439 (496)
T PLN02376 426 HVALGRIQDFVSKN 439 (496)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998887543
No 116
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.84 E-value=1.6e-18 Score=179.21 Aligned_cols=335 Identities=14% Similarity=0.159 Sum_probs=209.6
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+...+......|....+..++++.+.+|+...+|.+-.. ....++|+|+++|+..++.+...
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~i~it~G~~~al~~~~~~~~~------- 113 (391)
T PRK07309 45 PDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP----ENEILVTIGATEALSASLTAILE------- 113 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhcC-------
Confidence 3344555544433222346555667899999999999888864210 12689999999998877665422
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|++.+++|..+..+++..|+ +++.+|++. .++.+|++.|++++++..+ .+.+|+++.++|+||.+
T Consensus 114 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~~~~~~~---~~~~i~l~~P~NPtG~~ 182 (391)
T PRK07309 114 ----PGDKVLLPAPAYPGYEPIVNLVGA---EIVEIDTTE-NDFVLTPEMLEKAILEQGD---KLKAVILNYPANPTGVT 182 (391)
T ss_pred ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEEecCC-cCCcCCHHHHHHHhhccCC---CeEEEEEECCCCCCCcC
Confidence 455688888999999999999999 999999864 3468999999999865311 23477788899999987
Q ss_pred c---ChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhc
Q 010125 267 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLS 342 (517)
Q Consensus 267 d---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~ 342 (517)
- ++++|+++|++||+++++|++|+.+................--.+..+++|.++ ....+|+++... +.+. .+.
T Consensus 183 ~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~~-~~~~-~~~ 260 (391)
T PRK07309 183 YSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAPA-EFTA-QLI 260 (391)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeCH-HHHH-HHH
Confidence 4 489999999999999999999976654221111111111112256677999997 445678887643 3322 221
Q ss_pred CCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 010125 343 TNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCH 420 (517)
Q Consensus 343 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~ 420 (517)
....|... ....+...++...+ +........++..+.++++.+.|++. ++++. +|.
T Consensus 261 ~~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~p~ 318 (391)
T PRK07309 261 KSHQYLVT--------------------AATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKII-KPD 318 (391)
T ss_pred HHHhhccc--------------------CCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCC
Confidence 11111110 01122222233333 22223344556667788888999887 67765 455
Q ss_pred eeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHH
Q 010125 421 FAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEKRH 496 (517)
Q Consensus 421 ~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~d 496 (517)
.+.+.| ++.+. . ......+.+++. +.|+.+.++..+. +..++|++++. +.++
T Consensus 319 gg~~~~~~l~~~-~--------------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~~~ 374 (391)
T PRK07309 319 GAFYIFAKIPAG-Y--------------------NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAA---SMET 374 (391)
T ss_pred eeEEEEEECCCC-C--------------------CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---CHHH
Confidence 554433 43321 0 001234555543 5676555444332 35799999863 4679
Q ss_pred HHHHHHHHHHHHHHH
Q 010125 497 VVVAWTVVQQHLEAF 511 (517)
Q Consensus 497 i~~l~~~l~~~~~~l 511 (517)
+++++++|.+..+++
T Consensus 375 l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 375 IKEAMKRLKEYMEEH 389 (391)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999998877654
No 117
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1e-18 Score=180.34 Aligned_cols=326 Identities=12% Similarity=0.120 Sum_probs=210.4
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+.++.+++....+ ....|....+...+++.+++|+.+..|++-. ..+.++|+|+++|+..++.+...
T Consensus 45 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~-----~~~i~it~G~~~al~~~~~~~~~------- 111 (384)
T PRK06348 45 ESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFK-----RNEIMATVGACHGMYLALQSILD------- 111 (384)
T ss_pred HHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----hhhEEEcCChHHHHHHHHHHhcC-------
Confidence 4444444433222 2345666666788999999999988776433 13789999999998777665532
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|++.+++|..+..+++.+|. +++.+|+++++++.+|+++|++++++.++ +|+++.++|+||.+
T Consensus 112 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~~------~v~l~~p~NPtG~~ 178 (384)
T PRK06348 112 ----PGDEVIIHEPYFTPYKDQIEMVGG---KPIILETYEEDGFQINVKKLEALITSKTK------AIILNSPNNPTGAV 178 (384)
T ss_pred ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCcCcc------EEEEeCCCCCCCcC
Confidence 556788899999999999999999 89999875444578999999998865432 56667899999998
Q ss_pred cC---hhHHHHHHHHhCCeEEcccccccccccCcccccc--ccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhh
Q 010125 267 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSS 340 (517)
Q Consensus 267 dp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~ 340 (517)
-+ +++|.++|++||+++++|.+|+.+.... ..... +.+...-..+..++.|.++ ....+|+++..+. +.+.
T Consensus 179 ~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~~--~~~~ 255 (384)
T PRK06348 179 FSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPDY--IIET 255 (384)
T ss_pred CCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCHH--HHHH
Confidence 54 7889999999999999999998765422 11111 1111222355667999997 6678898887432 2222
Q ss_pred hcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 341 LSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 341 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
+.....+.. + ....+...++...+ ..+.+++..+...++++++.+.|++++++++. +
T Consensus 256 ~~~~~~~~~--------------~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~ 314 (384)
T PRK06348 256 AKIINEGIC--------------F------SAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH-P 314 (384)
T ss_pred HHHHHHhcc--------------C------CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-c
Confidence 211111000 0 00122222222222 23335556666777888899999888777654 5
Q ss_pred CCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcH
Q 010125 419 CHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEK 494 (517)
Q Consensus 419 ~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~ 494 (517)
|+.++++| ++..... ...++.+.+. +.|+.+.++..+. +..++|+++. .+.
T Consensus 315 p~gg~~~~~~~~~~~~----------------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~ 369 (384)
T PRK06348 315 PKGSIYAFINIKKTGL----------------------SSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACT---VGI 369 (384)
T ss_pred CCeeEEEEEecccCCC----------------------CHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEec---CCH
Confidence 66666544 3332110 1234555554 4577665554442 3579999984 367
Q ss_pred HHHHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQQH 507 (517)
Q Consensus 495 ~di~~l~~~l~~~ 507 (517)
+++++.++.|+++
T Consensus 370 ~~l~~al~~l~~~ 382 (384)
T PRK06348 370 EVLEEAFNRIEKM 382 (384)
T ss_pred HHHHHHHHHHHhh
Confidence 7888888888654
No 118
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.84 E-value=1.1e-18 Score=177.71 Aligned_cols=323 Identities=12% Similarity=0.043 Sum_probs=206.2
Q ss_pred HHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCC-ceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 109 FLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 109 ~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
.+.+.+..... ....|....+...+++.+.+|+.+..|++-+. . .+++|+|+++|+..++.+..+. |
T Consensus 17 ~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~-----~~~Iiit~Gs~~ai~~~~~~~~~~-----g- 84 (350)
T TIGR03537 17 FIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDP-----DAQVLPSAGSKEAIFHFPLVFIDP-----E- 84 (350)
T ss_pred HHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCcEEEcCChHHHHHHHHHHHcCC-----C-
Confidence 34444444332 23456665667899999999999988864331 2 6899999999887665544221 1
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD 267 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id 267 (517)
.+++.|++..++|..+..+++..|+ +++.||++.++++.+|++++++++++++ .+++++.++|+||.+-
T Consensus 85 --~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~~ 153 (350)
T TIGR03537 85 --EDRRRVIFGTPGYPVYERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILEET------KIVWINYPHNPTGATA 153 (350)
T ss_pred --CCCceEEEcCCCCcchHHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhhcc------EEEEEeCCCCCcCccc
Confidence 1225788889999999999999999 9999999754457899999999987644 3677888999999987
Q ss_pred C---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCC-CCCeeeeccccccCCC-CcceEEEEeCchhHHhhhc
Q 010125 268 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-GADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLS 342 (517)
Q Consensus 268 p---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~-~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~ 342 (517)
| +++|+++|++||+++++|++|+...... ....... .. .-..+..+++|.++.| ...|+++. ++... ..+.
T Consensus 154 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~-~~~~~~i~~~s~SK~~g~~GlRiG~~~~-~~~~~-~~~~ 229 (350)
T TIGR03537 154 PRSYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALE-VGIENVLAFHSLSKRSGMTGYRSGFVAG-DEKLI-SFLR 229 (350)
T ss_pred CHHHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhh-cCcCCEEEEeecccccCCccccceeeec-CHHHH-HHHH
Confidence 7 8999999999999999999997543221 1111111 11 1124555899998644 55787754 33322 2221
Q ss_pred CCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 010125 343 TNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHF 421 (517)
Q Consensus 343 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~ 421 (517)
....+. + .+. ..+...++...+ ..+.++++.++..++.+.+.+.|++. ++++. +|..
T Consensus 230 ~~~~~~----------------~--~~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~-~~~g 287 (350)
T TIGR03537 230 KLRANF----------------G--VAS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL-YPDA 287 (350)
T ss_pred HHHHhh----------------c--cCC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCe
Confidence 110010 0 000 111111111222 23345566677778888888888876 77655 5555
Q ss_pred eEEE-EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHH
Q 010125 422 AVVC-FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVV 498 (517)
Q Consensus 422 ~~v~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~ 498 (517)
+.+. +.+... ....++.+.|.++|+...++..+. +..++|+++. .++++++
T Consensus 288 ~~~~~~~~~~~-----------------------~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~~---~~~~~~~ 341 (350)
T TIGR03537 288 TFYLWVKVPSG-----------------------IDAKDYALRLLENGIVVAPGENFGSGEEGYVRVALV---PTLEECE 341 (350)
T ss_pred EEEEEEECCCC-----------------------CCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEec---CCHHHHH
Confidence 5433 344321 012466777777887655544442 2468999984 3567888
Q ss_pred HHHHHHHH
Q 010125 499 VAWTVVQQ 506 (517)
Q Consensus 499 ~l~~~l~~ 506 (517)
++++.+++
T Consensus 342 ~~l~~~~~ 349 (350)
T TIGR03537 342 EALRLWER 349 (350)
T ss_pred HHHHHHhc
Confidence 88887764
No 119
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.84 E-value=2.1e-18 Score=178.93 Aligned_cols=340 Identities=11% Similarity=0.015 Sum_probs=213.7
Q ss_pred hHHHHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHH
Q 010125 106 IAGFLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 184 (517)
Q Consensus 106 ~~~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~ 184 (517)
++..+.+.+...++.. ...|...++..++.+++++|+.+. |.+-. ...+++|+|+++|+..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~-----~~~i~~t~G~~~al~~~~~~l~~----- 117 (401)
T TIGR01264 49 TDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIE-----ADDVVLCSGCSHAIEMCIAALAN----- 117 (401)
T ss_pred CCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCC-----HHHEEECcChHHHHHHHHHHhCC-----
Confidence 3445555665555443 234666677888888888888763 43211 12688999999998777665432
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 185 IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
+++.|+++++++..+...++..|+ +++.++++.++++.+|++.|++++++.+ .+|+++.++|+||
T Consensus 118 ------~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~~p~NPtG 182 (401)
T TIGR01264 118 ------AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLKQLESLIDEKT------AALIVNNPSNPCG 182 (401)
T ss_pred ------CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHHhccCc------eEEEEcCCCCCCC
Confidence 455678888999889999999999 9999998755567999999999886543 2677888999999
Q ss_pred ccc---ChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCC-eeeeccccc-cCCCCcceEEEEeCch-hHH
Q 010125 265 AVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD-SFSLNAHKW-FFATLDCCCLWVKDPR-ALV 338 (517)
Q Consensus 265 ~id---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aD-si~~~~hK~-l~~p~~~g~l~~~~~~-~~~ 338 (517)
.+- ++++|+++|+++|+++++|.+|..+............-..... .++.++.|. +.....+|+++..++. .+.
T Consensus 183 ~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~ 262 (401)
T TIGR01264 183 SVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILR 262 (401)
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHH
Confidence 985 5889999999999999999999766532211111111111112 456679997 5566889999876431 111
Q ss_pred hhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010125 339 SSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVSGDKRFEI 415 (517)
Q Consensus 339 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l 415 (517)
+.+.... .+.... ++ ...+...++...+ ..+.+++.+++..+.++++.+.|++++++..
T Consensus 263 ~~~~~~~-~~~~~~-----------~~------~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~ 324 (401)
T TIGR01264 263 DIRDGLV-KLSQRI-----------LG------PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRP 324 (401)
T ss_pred HHHHHHH-HHhhcc-----------CC------CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Confidence 1110000 000000 00 0122222222222 2456677778888888999999998877765
Q ss_pred ecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcH
Q 010125 416 VFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLGGIYAIRFATGATLTEK 494 (517)
Q Consensus 416 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~ 494 (517)
..+...+.+.+++...... + .....++.+++. +.|+...++..+....++|++++. .+
T Consensus 325 ~~p~~g~f~~~~~~~~~~~--------------~----~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~---~~ 383 (401)
T TIGR01264 325 VMPSGAMYMMVGIEMEHFP--------------E----FKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTV---PV 383 (401)
T ss_pred cCCCeeeEEEEEecccccC--------------C----CCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcC---CH
Confidence 4333444444444321000 0 001244556654 568766555555445799999963 46
Q ss_pred HHHHHHHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQQHLEA 510 (517)
Q Consensus 495 ~di~~l~~~l~~~~~~ 510 (517)
+++++.+++|.++.++
T Consensus 384 ~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 384 VMMEEACSRIQEFCER 399 (401)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 7899999888877654
No 120
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.84 E-value=8.6e-19 Score=178.32 Aligned_cols=284 Identities=12% Similarity=0.052 Sum_probs=189.4
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
++++.+++++|.+++ ..++|+|+++++..++.+..+ +++.|++++++|..+...++..|+
T Consensus 58 ~lr~~ia~~~~~~~~-------~i~~~~G~~~~l~~~~~~l~~-----------~gd~v~~~~p~y~~~~~~~~~~g~-- 117 (346)
T TIGR01141 58 ELKQALADYYGVDPE-------QILLGNGSDEIIELLIRAFLE-----------PGDAVLVPPPTYSMYEISAKIHGA-- 117 (346)
T ss_pred HHHHHHHHHhCcChH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCHHHHHHHHHHcCC--
Confidence 344566666776554 689999999887665554321 456688888888777788889999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh--CCeEEcccccccccc
Q 010125 217 KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSAC 294 (517)
Q Consensus 217 ~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~--gi~lhvDaA~g~~~~ 294 (517)
+++.+|++. ++.+|++.|++++.+++ .+|+++.++|++|.+-|++++.++|+.+ |+++++|++|+....
T Consensus 118 -~~~~~~~~~--~~~~d~~~l~~~~~~~~------~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~ 188 (346)
T TIGR01141 118 -EVVKVPLDE--DGQLDLEDILVAIDDKP------KLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSG 188 (346)
T ss_pred -eEEEeccCC--CCCCCHHHHHHhcCCCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcC
Confidence 999999875 47899999999875443 3788889999999999999999999987 999999999974332
Q ss_pred cCccccccccCCCCCCeeeeccccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCC
Q 010125 295 ICPEFRHFIDGVEGADSFSLNAHKWFFA-TLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFR 373 (517)
Q Consensus 295 ~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 373 (517)
. .......... ..+.+..+++|+++. +..+|+++++ +... +.+...... ++ ..
T Consensus 189 ~-~~~~~~~~~~-~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~-~~~~~~~~~----------------~~------~~ 242 (346)
T TIGR01141 189 E-PSTLPLLAEY-PNLIVLRTLSKAFGLAGLRIGYAIAN-AEII-DALNKVRAP----------------FN------LS 242 (346)
T ss_pred C-ccHHHHHhhC-CCEEEEehhhHhhhchhhhceeeecC-HHHH-HHHHhccCC----------------CC------CC
Confidence 1 1111111111 223556789999954 4568988874 3322 223211000 00 01
Q ss_pred chHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHH
Q 010125 374 SLKLWFVIRNYGV-ANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQ 452 (517)
Q Consensus 374 al~~~~~l~~~g~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (517)
.+...++...+.. ..+.++.++..++++++.+.|++++++++. ++...+++|.+...
T Consensus 243 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~~--------------------- 300 (346)
T TIGR01141 243 RLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPRD--------------------- 300 (346)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCCC---------------------
Confidence 2223333333322 246777888889999999999988888864 44556666665321
Q ss_pred HHHHHHHHHHHHHhcCcEEEeeeeECC-EeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 453 INEFNRELLESINASGKAYMTHAVLGG-IYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 453 ~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
.+++.++|.+.|+...+...+.+ ..++|+++. +++|+++++++|+
T Consensus 301 ----~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~----~~~~i~~~~~~l~ 346 (346)
T TIGR01141 301 ----ADALFEALLEKGIIVRDLNSYPGLPNCLRITVG----TREENDRFLAALR 346 (346)
T ss_pred ----HHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC----CHHHHHHHHHHhC
Confidence 24567777788865544433322 578999974 5779999998763
No 121
>PRK07550 hypothetical protein; Provisional
Probab=99.84 E-value=1.7e-18 Score=178.85 Aligned_cols=329 Identities=11% Similarity=0.040 Sum_probs=209.7
Q ss_pred HHHHHHHHHhcc-cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 107 AGFLGEMLSSGF-NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 107 ~~~~~~~l~~~~-n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+..+.+.+...+ +.....|...++..++++.+++++.+..|.... ...+++|+|+++|+..++.+...
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~------ 112 (386)
T PRK07550 44 PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAIS-----PEQVHITSGCNQAFWAAMVTLAG------ 112 (386)
T ss_pred CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----cceEEEecCcHHHHHHHHHHhcC------
Confidence 444555555443 223345656668899999999999998886432 13789999999888766655422
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++.+++|..+...++..|+ +++.|+.+++.++.+|+++|++++++.++ +|+++.++++||.
T Consensus 113 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~~~~------~v~~~~P~NPtG~ 178 (386)
T PRK07550 113 -----AGDEVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITPRTR------AIALVTPNNPTGV 178 (386)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhcccCc------EEEEeCCCCCCCc
Confidence 566789999999888888899999 99999997544577899999999976432 5667789999998
Q ss_pred ccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCC-CC-CeeeeccccccC-CCCcceEEEEeCchhHHh
Q 010125 266 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-GA-DSFSLNAHKWFF-ATLDCCCLWVKDPRALVS 339 (517)
Q Consensus 266 idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~-~a-Dsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~ 339 (517)
+-+ +++|+++|++||+++++|++|+.+..........+.... .. ..+..+++|.++ ....+|+++..+. ...
T Consensus 179 ~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~~-~~~- 256 (386)
T PRK07550 179 VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASPA-RIA- 256 (386)
T ss_pred ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCHH-HHH-
Confidence 865 889999999999999999999765321111111111111 11 244678999997 4567888887532 221
Q ss_pred hhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 340 SLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG--VANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 340 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
.+. .++... +.. ...+..+++...+. .+..++..++..++++++.+.|++.+++.+.
T Consensus 257 ~~~---~~~~~~-------------~~~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~- 315 (386)
T PRK07550 257 EIE---KFMDTV-------------AIC----APRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL- 315 (386)
T ss_pred HHH---HHHhhc-------------ccC----CCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-
Confidence 111 111100 000 12233333333332 2344555666777888899999887676543
Q ss_pred CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcH
Q 010125 418 PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEK 494 (517)
Q Consensus 418 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~ 494 (517)
++....+++++.... ....++.++|. +.|+...++..+. +..++|+++.. .++
T Consensus 316 ~~g~~~~~~~~~~~~----------------------~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~--~~~ 371 (386)
T PRK07550 316 ASGAYFAYVRHPFPD----------------------RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN--ADV 371 (386)
T ss_pred CCceEEEEecCCCCC----------------------CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec--CCH
Confidence 333334444443211 01345666654 5676555444332 35689999953 357
Q ss_pred HHHHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQQH 507 (517)
Q Consensus 495 ~di~~l~~~l~~~ 507 (517)
++++++++.|.+.
T Consensus 372 ~~~~~~~~~l~~~ 384 (386)
T PRK07550 372 AGIGELVERLRAF 384 (386)
T ss_pred HHHHHHHHHHHhh
Confidence 7999999888765
No 122
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.84 E-value=2.9e-18 Score=177.80 Aligned_cols=333 Identities=13% Similarity=0.091 Sum_probs=207.9
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+....+ ....|....+..++.+.+.+++.. .|.+-. ....++|+|+|+|+..++.+..+
T Consensus 45 ~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~------- 110 (397)
T PRK07568 45 PEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVE-----PDEILITNGGSEAILFAMMAICD------- 110 (397)
T ss_pred CHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCC-----cceEEEcCChHHHHHHHHHHhcC-------
Confidence 4455555554433 234566666778888888888873 444322 12689999999998776655422
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCccc-CHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGL-SPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~-d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|+++++.|..+...++..|+ +++.||++.++++.+ ++++|++++++.+ .+|+++.++|+||.
T Consensus 111 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~~~l~~~~~~~~------~~v~i~~p~NPtG~ 177 (397)
T PRK07568 111 ----PGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSKEEIEKLITPKT------KAILISNPGNPTGV 177 (397)
T ss_pred ----CCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCHHHHHHhcCccc------eEEEEECCCCCCCc
Confidence 456688887888777778888999 999999864333443 6899999886544 36788889999998
Q ss_pred ccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCC--eeeeccccccCC-CCcceEEEEeCchhHHh
Q 010125 266 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD--SFSLNAHKWFFA-TLDCCCLWVKDPRALVS 339 (517)
Q Consensus 266 idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aD--si~~~~hK~l~~-p~~~g~l~~~~~~~~~~ 339 (517)
+-+ +++|+++|+++|+++++|++|+.+............-....+ .+.-+++|.++. ...+|++++.++.....
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~ 257 (397)
T PRK07568 178 VYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIAA 257 (397)
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHHH
Confidence 864 789999999999999999999876432211112111111122 455679999974 67899988765544322
Q ss_pred hhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 340 SLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 340 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
........+ ....+...++...+ +.+.++++.+...+.++.+.+.|++.+++.+.
T Consensus 258 ~~~~~~~~~----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~- 314 (397)
T PRK07568 258 AMKLCQARL----------------------SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCE- 314 (397)
T ss_pred HHHHhhccC----------------------CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-
Confidence 111100000 01122222222222 34566777778888899999999888777654
Q ss_pred CCCeeEE-EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH--HhcCcEEEeeeeEC-----CEeEEEEEecC
Q 010125 418 PCHFAVV-CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI--NASGKAYMTHAVLG-----GIYAIRFATGA 489 (517)
Q Consensus 418 ~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l--~~~g~~~~~~~~~~-----g~~~lR~~~~~ 489 (517)
.|..+++ ++++.... ..++.+.+.+.. .+.|+.+.++..+. +..++|++++.
T Consensus 315 ~p~g~~~~~~~l~~~~--------------------~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~ 374 (397)
T PRK07568 315 KPKGAFYIIAKLPVDD--------------------AEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL 374 (397)
T ss_pred CCCcceEEEEecCCCC--------------------HHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC
Confidence 4555544 44443210 122223333221 12466555544331 24689999852
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHH
Q 010125 490 TLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 490 ~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
+.++++++++.|.+..++..
T Consensus 375 ---~~~~~~~~~~~l~~~l~~~~ 394 (397)
T PRK07568 375 ---NEEDLKRAMEILKEALEKYN 394 (397)
T ss_pred ---CHHHHHHHHHHHHHHHHHhh
Confidence 46799999999988876643
No 123
>PRK09265 aminotransferase AlaT; Validated
Probab=99.84 E-value=1.8e-18 Score=179.56 Aligned_cols=318 Identities=11% Similarity=0.044 Sum_probs=201.3
Q ss_pred cccccChhhHHHHHHHHHHHHHHc--CCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCC
Q 010125 123 FNWISSPAATELENIVMDWLGQML--KLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQ 200 (517)
Q Consensus 123 ~~~~~sp~~~~lE~~v~~~l~~l~--g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~ 200 (517)
..|....+...+.+.+++|+.... +++++ ..++|+|+++++..++.+..+ +++.|+++++
T Consensus 66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~p 127 (404)
T PRK09265 66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVD-------DIYIGNGVSELIVMAMQALLN-----------NGDEVLVPAP 127 (404)
T ss_pred CCCCCCCCcHHHHHHHHHHHhccCCCCCCcc-------cEEEeCChHHHHHHHHHHhCC-----------CCCEEEEeCC
Confidence 456665566788888888886532 34433 688999999888766654422 5567888999
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHH
Q 010125 201 THCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAK 277 (517)
Q Consensus 201 ~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~ 277 (517)
+|..+..+++..|. +++.++++.++++.+|+++|++++++.+ .+|+++.++|+||.+-+ +++|+++|+
T Consensus 128 ~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPtG~~~~~~~~~~i~~~a~ 198 (404)
T PRK09265 128 DYPLWTAAVSLSGG---KPVHYLCDEEAGWFPDLDDIRSKITPRT------KAIVIINPNNPTGAVYSKELLEEIVEIAR 198 (404)
T ss_pred CCcChHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 99999999999998 8998988754567899999999886543 37888889999999887 899999999
Q ss_pred HhCCeEEcccccccccccCccccccccCCCCCCeee-eccccccC-CCCcceEEEEe-Cchh---HHhhhcCCccccCCc
Q 010125 278 QFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFS-LNAHKWFF-ATLDCCCLWVK-DPRA---LVSSLSTNPEYLKNK 351 (517)
Q Consensus 278 ~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~-~~~hK~l~-~p~~~g~l~~~-~~~~---~~~~~~~~~~yl~~~ 351 (517)
+||+++++|.+|+..............-......++ -++.|.++ ....+|+++.. ++.. +.+.+... .+..
T Consensus 199 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~-- 275 (404)
T PRK09265 199 QHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMR-- 275 (404)
T ss_pred HCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hccc--
Confidence 999999999999765432111111111112223444 45799995 45778998864 3321 11111100 0000
Q ss_pred cccccccccCCCccccCCCCCCchHHHHHHHHhcH-HHHHHHH---HHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEE-
Q 010125 352 ATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGV-ANLRHFL---RSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCF- 426 (517)
Q Consensus 352 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~i---~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f- 426 (517)
. ....+...++...++. +.+.+++ ++..+.++.+.+.|++.+++++. +|..++++|
T Consensus 276 --------------~----~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~~l~~ 336 (404)
T PRK09265 276 --------------L----CANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCV-KPKGALYAFP 336 (404)
T ss_pred --------------c----CCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-CCCcceEEEE
Confidence 0 0122233333333321 2222222 35566778888889888787765 455555544
Q ss_pred EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 427 RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
++.+... . .......+.+.+.+.|+.+..+..+. +..++|+++. .+++++++++++|
T Consensus 337 ~~~~~~~---------------~---~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~---~~~e~l~~~l~rl 395 (404)
T PRK09265 337 KLDPKVY---------------P---IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTL---PRVDDLEEAIGRI 395 (404)
T ss_pred Eeccccc---------------C---CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeC---CCHHHHHHHHHHH
Confidence 4432100 0 00012345566677887665555442 3579999984 4678999999999
Q ss_pred HHHHHH
Q 010125 505 QQHLEA 510 (517)
Q Consensus 505 ~~~~~~ 510 (517)
.+..+.
T Consensus 396 ~~~l~~ 401 (404)
T PRK09265 396 GRFLSG 401 (404)
T ss_pred HHHHHH
Confidence 877654
No 124
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.84 E-value=2.9e-19 Score=182.96 Aligned_cols=318 Identities=16% Similarity=0.132 Sum_probs=211.4
Q ss_pred cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCC
Q 010125 121 VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQ 200 (517)
Q Consensus 121 ~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~ 200 (517)
....|....+...+++.+++|+.+-.|++.+. ...+++++|+.+.+.++...... .++..|++.++
T Consensus 36 ~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~i~~~~G~~~~~~~~~~~~~~---------~~~~~vlv~~P 101 (363)
T PF00155_consen 36 SFLGYPPPQGYPELREAIADFLGRRYGVPVDP-----EANILVTSGAQAALFLLLRLLKI---------NPGDTVLVPDP 101 (363)
T ss_dssp GCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG-----GEGEEEESHHHHHHHHHHHHHHS---------STTSEEEEEES
T ss_pred ccccCCCchhhHHHHHHHHHHhhhccCccccc-----ceEEEEecccccchhhhhhcccc---------cccccceecCC
Confidence 34577777789999999999999766665432 21344445555554444433310 15567888899
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHH
Q 010125 201 THCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAK 277 (517)
Q Consensus 201 ~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~ 277 (517)
+|..+..+++..|+ .++.+|++..+++.+|+++|++.+++...++..+.+|+.+.++++||.+-+ +++|+++|+
T Consensus 102 ~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~ 178 (363)
T PF00155_consen 102 CYPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAR 178 (363)
T ss_dssp SSTHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHH
T ss_pred ccccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhc
Confidence 99999999999999 999999865567899999999999987655434567888999999998855 555555599
Q ss_pred HhCCeEEcccccccccccCccccccccCC-CCCC-eeeeccccccCCC-CcceEEEEeCchhHHhhhcCC-ccccCCccc
Q 010125 278 QFGIWVHVDAAYAGSACICPEFRHFIDGV-EGAD-SFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTN-PEYLKNKAT 353 (517)
Q Consensus 278 ~~gi~lhvDaA~g~~~~~~~~~~~~~~g~-~~aD-si~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~-~~yl~~~~~ 353 (517)
+||+++++|.+|+.+.............+ ...+ .++.+++|.++.| ...|++++ ++... +.+... ..+.
T Consensus 179 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~-~~l~~~~~~~~----- 251 (363)
T PF00155_consen 179 EYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELI-ERLRRFQRSGL----- 251 (363)
T ss_dssp HTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHH-HHHHHHHHHTT-----
T ss_pred ccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhh-hhhhhcccccc-----
Confidence 99999999999988765533211101111 1223 6777899998765 56899888 34332 222111 1110
Q ss_pred cccccccCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCC
Q 010125 354 ESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG--VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPS 431 (517)
Q Consensus 354 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~ 431 (517)
........+...+...+ .+.++++.++..++++++.+.|++. ++.+..++ .++++|...+.
T Consensus 252 ---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~~~ 314 (363)
T PF00155_consen 252 ---------------SSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRLDP 314 (363)
T ss_dssp ---------------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEESH
T ss_pred ---------------ccchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEccc
Confidence 00001112222222222 1267788889999999999999888 89887544 66666654432
Q ss_pred CcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhc-CcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 432 PVLMDKLKTKYVNCLLSEEEQINEFNRELLESINAS-GKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
. ...++.+.|.++ |+...++..+....++|+++ . ..+++++++++++|
T Consensus 315 ----------------------~-~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a-~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 315 ----------------------N-DAEELAQELLEEYGILVRPGSYFGVPGYIRISL-A-SHSEEDLEEALERL 363 (363)
T ss_dssp ----------------------H-HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-G-CSCHHHHHHHHHHH
T ss_pred ----------------------c-hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-c-cCCHHHHHHHHhhC
Confidence 1 346677778777 87665554444467999998 3 45778999999875
No 125
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.84 E-value=2.2e-18 Score=177.86 Aligned_cols=328 Identities=13% Similarity=0.067 Sum_probs=207.0
Q ss_pred HHHHHHHHHhccc-ccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 107 AGFLGEMLSSGFN-IVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 107 ~~~~~~~l~~~~n-~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+..+.+.+...+. .....|....+..++.+.+++|+.+.+|.+... ....++|+|+++++..++.+..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~vi~t~G~~~~l~~~~~~~~~------ 113 (383)
T TIGR03540 44 PKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP----ETEVLSLIGSKEGIAHIPLAFVN------ 113 (383)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence 4445555554432 233456655567889999999999888874321 01467888989888766654322
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++.+++|..+..+++.+|+ +++.+|++.++++.+|+++|++++.+++ .+|+++.++||||.
T Consensus 114 -----~gd~vlv~~P~y~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~i~~P~NPtG~ 179 (383)
T TIGR03540 114 -----PGDIVLVPDPGYPVYRIGTLFAGG---EPYEMPLKEENGFLPDFDAIPEDIAKKA------KLMFINYPNNPTGA 179 (383)
T ss_pred -----CCCEEEEeCCCCcchHHHHHhcCC---EEEEEecCcccCCccCHHHHHhhccccc------eEEEEeCCCCCcCc
Confidence 567789999999999999999999 9999999754457789999999886533 37777889999999
Q ss_pred ccC---hhHHHHHHHHhCCeEEcccccccccccCcccccc--ccCCCCCCeeeeccccccCC-CCcceEEEEeCchhHHh
Q 010125 266 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFFA-TLDCCCLWVKDPRALVS 339 (517)
Q Consensus 266 idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~~~~~~~~~ 339 (517)
+-+ +++|+++|++||+++++|.+|+............ +.+.........++.|.++. ...+|+++.. +... +
T Consensus 180 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~-~~l~-~ 257 (383)
T TIGR03540 180 VAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN-ADLI-A 257 (383)
T ss_pred cCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC-HHHH-H
Confidence 977 7899999999999999999997554321111111 11111223556779999964 4568888653 3332 2
Q ss_pred hhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 010125 340 SLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC 419 (517)
Q Consensus 340 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~ 419 (517)
.+.....+... +........+..++.. +.+.+++..+...++++.+.+.|++. ++.+. +|
T Consensus 258 ~~~~~~~~~~~-----------------~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~ 317 (383)
T TIGR03540 258 GLGKVKTNVDS-----------------GVFQAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKI-GIDVE-KP 317 (383)
T ss_pred HHHHHHHhccc-----------------CCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCEec-CC
Confidence 22110001000 0000011122222221 34556677777888899999999987 78766 44
Q ss_pred CeeE-EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHH
Q 010125 420 HFAV-VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEKR 495 (517)
Q Consensus 420 ~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~ 495 (517)
..+. +++++.+. . ...++.+.+. +.|+...++..+. +..++|++++. +++
T Consensus 318 ~~~~~~~~~l~~~-~----------------------~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~---~~~ 371 (383)
T TIGR03540 318 KATFYVWVPVPEG-Y----------------------TSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTV---PDE 371 (383)
T ss_pred CcceEEEEECCCC-C----------------------CHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecC---CHH
Confidence 4454 44444321 0 1245666654 4676555444332 34689999953 456
Q ss_pred HHHHHHHHHHH
Q 010125 496 HVVVAWTVVQQ 506 (517)
Q Consensus 496 di~~l~~~l~~ 506 (517)
++.+.++.|.+
T Consensus 372 ~l~~~l~~l~~ 382 (383)
T TIGR03540 372 RLEEAVARIKK 382 (383)
T ss_pred HHHHHHHHHhh
Confidence 77777766653
No 126
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.84 E-value=3.1e-18 Score=179.03 Aligned_cols=371 Identities=15% Similarity=0.084 Sum_probs=214.9
Q ss_pred CCHHHHHHHHHHhhcCCCCCCCCC-ccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCC
Q 010125 71 ESMETILQDVQQHIVPGITHWQSP-NYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLP 149 (517)
Q Consensus 71 ~~~~~il~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~ 149 (517)
...++..+.+.+. -.+..+.... -++++.+.+.+. .+.+...+++......|..+++..++|+.+.+++.. +
T Consensus 22 ~~~~~~~~~l~~~-g~~~~~L~~g~p~~D~~tds~t~--a~~~a~~~a~~~g~~~Y~~~~g~~~Lreaia~~~~~----~ 94 (460)
T PRK13238 22 TTREERERALAEA-GYNPFLLKSEDVFIDLLTDSGTG--AMSDRQWAAMMRGDEAYAGSRSYYRLEDAVKDIFGY----P 94 (460)
T ss_pred cCHHHHHHHHHHc-CCCEEeCCCCCCCCCCCCCCCch--hhhHHHHHHHHhCCcccCCCCCHHHHHHHHHHHhCC----C
Confidence 4566666666543 2233333221 134554332221 344444444434445788899999999887766643 2
Q ss_pred cccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCC--
Q 010125 150 KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKS-- 227 (517)
Q Consensus 150 ~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~-- 227 (517)
.+++|+|||+|+..++.+..+ +++ |+++++.+.+....+...|. +++.+|+++.
T Consensus 95 ---------~vv~t~ggt~A~~~~~~all~-----------pGD-Vii~~p~~~~~~~~i~~~G~---~~v~v~~~~~~~ 150 (460)
T PRK13238 95 ---------YTIPTHQGRAAEQILFPVLIK-----------KGD-VVPSNYHFDTTRAHIELNGA---TAVDLVIDEALD 150 (460)
T ss_pred ---------cEEECCCHHHHHHHHHHHhCC-----------CCC-EEccCCcccchHHHHHHcCC---EEEEEecccccc
Confidence 479999999999888766533 455 66776644555566788899 9999998641
Q ss_pred ----CC--cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc-cc---cChhHHHHHHHHhCCeEEcccccccc-cccC
Q 010125 228 ----SS--YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT-AV---DPLKPLCDVAKQFGIWVHVDAAYAGS-ACIC 296 (517)
Q Consensus 228 ----~~--~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G-~i---dpl~eI~~i~~~~gi~lhvDaA~g~~-~~~~ 296 (517)
+. |.+|+++|+++|++... .++.+|+++.++|++| .+ +++++|+++|++||+++++|+|+... +++.
T Consensus 151 ~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~ 228 (460)
T PRK13238 151 TGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFI 228 (460)
T ss_pred ccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhh
Confidence 13 34999999999975321 1244889999999998 44 55789999999999999999988432 2222
Q ss_pred c----ccccc-cc-----CCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccc
Q 010125 297 P----EFRHF-ID-----GVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQI 366 (517)
Q Consensus 297 ~----~~~~~-~~-----g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 366 (517)
. .+... +. -...+|++++++||.+++|.| |++.+++.+...+.-.... ... .+..
T Consensus 229 ~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~~~~~~~~~--~~~------------g~~t 293 (460)
T PRK13238 229 KQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLFTECRTLCI--LYE------------GFPT 293 (460)
T ss_pred hhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHHHHhhhccc--ccC------------Cccc
Confidence 1 11110 11 024699999999999999885 8888887554432211100 000 0111
Q ss_pred cCCCCCC-chHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEE-EecCCCcchhhhhhhhh
Q 010125 367 TLSRRFR-SLKLWFVIRN-YGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCF-RVSPSPVLMDKLKTKYV 443 (517)
Q Consensus 367 ~~sr~~~-al~~~~~l~~-~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~ 443 (517)
.++.... ..++..+++. ...+ .++...+.+++|.+.|++. |+.++.+ ..+..+| .+..- . +
T Consensus 294 ~~g~~~~~~~Ala~~l~e~~~~~----~~~~~~~~~~~l~~~L~~~-G~~~~~p-~Gg~~v~~d~~~~-~---------~ 357 (460)
T PRK13238 294 YGGLAGRDMEALAVGLYEGMDED----YLAYRIGQVEYLGEGLEEA-GVPIQTP-AGGHAVFVDAGKF-L---------P 357 (460)
T ss_pred ccCcHHHHHHHHHhhHHHhhChH----HHHHHHHHHHHHHHHHHHC-CCCeEcc-CCceEEEEEchhc-C---------C
Confidence 1111111 1222223322 1222 3333444678999999886 8988754 3333333 22110 0 0
Q ss_pred ccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE-------CC------EeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 444 NCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVL-------GG------IYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 444 ~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~-------~g------~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
...... .-..++..+|. +.|+..+....+ .| ...+|+++.-..-+.++++.+.+.|+++.+
T Consensus 358 ---~~~~~~--~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 358 ---HIPAEQ--FPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred ---CCCCCC--CchHHHHHHHHHHcCeeeecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 000000 00133444443 456655444322 12 478999995433467799999999998864
Q ss_pred H
Q 010125 510 A 510 (517)
Q Consensus 510 ~ 510 (517)
+
T Consensus 433 ~ 433 (460)
T PRK13238 433 N 433 (460)
T ss_pred h
Confidence 3
No 127
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.84 E-value=4.6e-20 Score=186.60 Aligned_cols=288 Identities=17% Similarity=0.190 Sum_probs=182.7
Q ss_pred HHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcccc-----------cccccccChhhHHHHHHHHHHHHH
Q 010125 76 ILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNI-----------VGFNWISSPAATELENIVMDWLGQ 144 (517)
Q Consensus 76 il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-----------~~~~~~~sp~~~~lE~~v~~~l~~ 144 (517)
+++.|.+....+...|+-|.+-+ +.......++..+...+.. .....-..|..... +..+.+++
T Consensus 3 l~~aL~~y~~~~~~~fh~PGHk~---G~~~~~~p~g~~~~~f~G~~~~~~Dl~te~~~lD~L~~p~G~I~--eAe~~aA~ 77 (417)
T PF01276_consen 3 LFEALKKYAEEGPYSFHMPGHKG---GRGFDKSPAGRLFYDFFGENLFRADLSTEVPGLDDLHDPEGIIK--EAEELAAR 77 (417)
T ss_dssp HHHHHHHHHHTT-EESSSSTTTT---TTCGGGSHHHHHHHHHH-HHHHHT---TTSTTCBBTTTTBTHHH--HHHHHHHH
T ss_pred HHHHHHHHHhCCCceeecCccCC---CCCCCcchHHHHHHHHHhhHHHHHHHhhcccccCcccCCccHHH--HHHHHHHH
Confidence 44556666666777787775533 2222222233333222211 11222223333333 44588999
Q ss_pred HcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEec
Q 010125 145 MLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKT 224 (517)
Q Consensus 145 l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~ 224 (517)
+||.+.++ ++++|+|.+|..++.++.. +++.|++...+|-|+..++.+.|+ .+++++.
T Consensus 78 ~fGAd~t~--------flvnGsT~g~~a~i~a~~~-----------~gd~VLv~RN~HkSv~~alil~ga---~Pvyi~p 135 (417)
T PF01276_consen 78 AFGADKTF--------FLVNGSTSGNQAMIMALCR-----------PGDKVLVDRNCHKSVYNALILSGA---IPVYIPP 135 (417)
T ss_dssp HHTESEEE--------EESSHHHHHHHHHHHHHTT-----------TTCEEEEETT--HHHHHHHHHHTE---EEEEEEE
T ss_pred hcCCCeEE--------EEecCchHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---eEEEecC
Confidence 99998875 8888889999888877754 677899999999999999999999 9998876
Q ss_pred CCCC---CcccCH-----HHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccC
Q 010125 225 TKSS---SYGLSP-----DSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC 296 (517)
Q Consensus 225 d~~~---~~~~d~-----~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~ 296 (517)
...+ -+.+++ +.|+++|++...... |.+|++|.+| ..|.+-|+++|+++|+++|+.|+||+|||+.+.+.
T Consensus 136 ~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~-~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~ 213 (417)
T PF01276_consen 136 EDNEYGIIGGISPDEFNEEDIEEALKEHPDAKA-PRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFH 213 (417)
T ss_dssp EE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHC-ESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCS
T ss_pred CccccCCccCCChhhhhHHHHHHHHHhCccccC-ceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCC
Confidence 5211 134566 999999987654321 5568888877 57999999999999999999999999999988777
Q ss_pred ccccccccCCCCCC-------eeeeccccccCCCCcceEEEEeCch-h----HHhhh----cCCccccCCcccccccccc
Q 010125 297 PEFRHFIDGVEGAD-------SFSLNAHKWFFATLDCCCLWVKDPR-A----LVSSL----STNPEYLKNKATESMQVVD 360 (517)
Q Consensus 297 ~~~~~~~~g~~~aD-------si~~~~hK~l~~p~~~g~l~~~~~~-~----~~~~~----~~~~~yl~~~~~~~~~~~~ 360 (517)
+-.++.+. -++| .++-|.||+|.+--+++++.+++.. . +.+++ +.+|.|+.-
T Consensus 214 ~lp~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lm---------- 281 (417)
T PF01276_consen 214 PLPRSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLM---------- 281 (417)
T ss_dssp GGGTTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHH----------
T ss_pred CCccchhh--ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHH----------
Confidence 43333221 2788 9999999999999999999999875 2 22221 222222210
Q ss_pred CCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH---hcCCCeEEecCC
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLV---SGDKRFEIVFPC 419 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l---~~~~~~~l~~~~ 419 (517)
..+=.+.+.+ +.+| ++++++..++++.+++.| ++++.|+++.+.
T Consensus 282 --------------ASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~ 329 (417)
T PF01276_consen 282 --------------ASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPE 329 (417)
T ss_dssp --------------HHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-S
T ss_pred --------------HHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCcc
Confidence 1111222333 3333 567778888888888888 678888887653
No 128
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.84 E-value=1.7e-18 Score=180.13 Aligned_cols=297 Identities=11% Similarity=0.090 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG 213 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G 213 (517)
...++.+.+++++|.+ ..+++++|++||..++..++.. .++.+|+.+...|.|+..+++..|
T Consensus 92 ~~~~l~~~la~~~g~~---------~~~~~~sG~~an~~ai~~l~~~---------~~~~~i~~~~~~h~s~~~~~~~~~ 153 (407)
T PRK09064 92 YHVELERELADLHGKE---------AALVFTSGYVSNDATLSTLAKL---------IPDCVIFSDELNHASMIEGIRRSR 153 (407)
T ss_pred HHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHHhCC---------CCCCEEEEeCcchHHHHHHHHHcC
Confidence 3344555666777743 3466777889998888766431 145677777788999988888888
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccc
Q 010125 214 IDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 293 (517)
Q Consensus 214 ~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~ 293 (517)
. .++.++. .|+++|++.++... ...+.+|+++...+++|.+.|+++|.++|++||++++||+||+.+.
T Consensus 154 ~---~~~~~~~-------~d~~~le~~l~~~~--~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~ 221 (407)
T PRK09064 154 C---EKHIFRH-------NDVAHLEELLAAAD--PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGM 221 (407)
T ss_pred C---cEEEECC-------CCHHHHHHHHHhcc--CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCcccc
Confidence 7 7766653 27889998886421 1234578888899999999999999999999999999999997443
Q ss_pred ccCcccccc--ccC-CCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccccccccCCCccccCC
Q 010125 294 CICPEFRHF--IDG-VEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLS-TNPEYLKNKATESMQVVDYKDWQITLS 369 (517)
Q Consensus 294 ~~~~~~~~~--~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~s 369 (517)
+ .+..... ..+ .+..|.++.+++|.++.+ .|+++.+ +... +.+. ...+|.. ..+
T Consensus 222 ~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~--GG~~~~~-~~~~-~~l~~~~~~~~~-----------------t~~ 279 (407)
T PRK09064 222 Y-GPRGGGIAERDGLMDRIDIIEGTLAKAFGVM--GGYIAGS-AALV-DAVRSYAPGFIF-----------------TTS 279 (407)
T ss_pred c-CCCCCChHHhcCCCCCCeEEEEecchhhhcc--CceEecC-HHHH-HHHHHhCccccc-----------------cCc
Confidence 2 1111111 112 235688888999999754 2665543 3322 2221 1112211 111
Q ss_pred CC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccc
Q 010125 370 RR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLS 448 (517)
Q Consensus 370 r~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 448 (517)
.. ..+..+..+++.+... ....++..++++++.+.|++. +++++ ++..+++.+.+..
T Consensus 280 ~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~iv~i~~~~------------------ 337 (407)
T PRK09064 280 LPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAA-GIPVM-PNESHIVPVMVGD------------------ 337 (407)
T ss_pred CCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC------------------
Confidence 11 1223344455544322 334577888999999999886 77765 3456666665532
Q ss_pred hHHHHHHHHHHHHHHHHhc-CcEEEeee----eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 449 EEEQINEFNRELLESINAS-GKAYMTHA----VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 449 ~~~~~~~~~~~l~~~l~~~-g~~~~~~~----~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.....++.++|.++ |++ +.+. ...+..++|+++. ..++++|++++++.|+++.+++
T Consensus 338 -----~~~~~~l~~~L~~~~gi~-v~~~~~p~~~~~~~~lRis~~-~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 338 -----PEKCKKASDMLLEEHGIY-VQPINYPTVPRGTERLRITPT-PFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred -----HHHHHHHHHHHHHhCCEE-EeeECCCCCCCCCceEEEEeC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 12245667777644 654 3332 1234568999984 5678889999999999987654
No 129
>PRK07337 aminotransferase; Validated
Probab=99.84 E-value=2.3e-18 Score=177.97 Aligned_cols=329 Identities=12% Similarity=0.057 Sum_probs=210.2
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+...+......|....+...+++.+++|+.+.+|..-. ....++|+|+++|+..++.+..+
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~------- 112 (388)
T PRK07337 45 PEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVA-----PERIVVTAGASAALLLACLALVE------- 112 (388)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----hHhEEEecCcHHHHHHHHHHhcC-------
Confidence 344556666555444456766667889999999999998886422 12689999999998766654422
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|++++++|.+...+++..|. +++.+|++.++++.+|+++|++.+.+.++ +|+.+.++|+||.+
T Consensus 113 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~v~l~~p~NPtG~~ 179 (388)
T PRK07337 113 ----RGDEVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGERTR------GVLLASPSNPTGTS 179 (388)
T ss_pred ----CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCccce------EEEEECCCCCCCcC
Confidence 566788999999999999999998 99999997655689999999998875443 67778899999997
Q ss_pred cC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCee-eeccccccC-CCCcceEEEEeCchhHHhhh
Q 010125 267 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF-SLNAHKWFF-ATLDCCCLWVKDPRALVSSL 341 (517)
Q Consensus 267 dp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi-~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~ 341 (517)
-+ +++|+++|++||+|+++|.+|...... +....... + ..+.+ ..+++|.++ ....+|+++..+. +.+.+
T Consensus 180 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~-~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~~--l~~~l 254 (388)
T PRK07337 180 IAPDELRRIVEAVRARGGFTIVDEIYQGLSYD-AAPVSALS-L-GDDVITINSFSKYFNMTGWRLGWLVVPEA--LVGTF 254 (388)
T ss_pred cCHHHHHHHHHHHHHCCCEEEEeccccccccC-CCCcChhh-c-cCCEEEEEechhhcCCchhheeeeecCHH--HHHHH
Confidence 54 788899999999999999999765431 11111111 1 23445 457999996 4466898887532 22222
Q ss_pred cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 342 STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG---VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 342 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
.....++. .....+..+++...+. .+.+.+..++..+.++++.+.|++. ++.+...
T Consensus 255 ~~~~~~~~--------------------~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~ 313 (388)
T PRK07337 255 EKLAQNLF--------------------ICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVM 313 (388)
T ss_pred HHHHHHhc--------------------cCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccC
Confidence 11111110 0012233333444332 2345666677778888899999886 5554324
Q ss_pred CCee-EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeEC---CEeEEEEEecCCCCc
Q 010125 419 CHFA-VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI-NASGKAYMTHAVLG---GIYAIRFATGATLTE 493 (517)
Q Consensus 419 ~~~~-~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~---g~~~lR~~~~~~~t~ 493 (517)
|+.+ .+.+++..... + + .....++.+++ .+.|+.+.++..+. +..++|++++. +
T Consensus 314 p~~g~f~~~~~~~~~~---------~-----~----~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~---~ 372 (388)
T PRK07337 314 PDGAFYVYADCRGVAH---------P-----A----AGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYAT---S 372 (388)
T ss_pred CCeeEEEEEecccccC---------C-----C----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecC---C
Confidence 4444 44444432100 0 0 00123455553 45676555444442 24699999964 4
Q ss_pred HHHHHHHHHHHHHH
Q 010125 494 KRHVVVAWTVVQQH 507 (517)
Q Consensus 494 ~~di~~l~~~l~~~ 507 (517)
++++.+.+++|.++
T Consensus 373 ~~~l~~~l~rl~~~ 386 (388)
T PRK07337 373 MSRLEEAVARLGKL 386 (388)
T ss_pred HHHHHHHHHHHHHH
Confidence 67888888877654
No 130
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.84 E-value=3.4e-18 Score=176.52 Aligned_cols=305 Identities=12% Similarity=0.050 Sum_probs=195.0
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCch
Q 010125 124 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHC 203 (517)
Q Consensus 124 ~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~ 203 (517)
.|....+...+.+++.+++++++|.+. ..++ ++|+++++.++.+..+ ++++|++++..|.
T Consensus 69 ~~~~~~g~~~l~~~l~~~l~~~~g~~~--------~i~~-~sG~~a~~~a~~~~~~-----------~gd~vi~~~~~~~ 128 (385)
T TIGR01825 69 AVRTIAGTLRLHEELEEKLAKFKKTEA--------ALVF-QSGFNTNQGVLSALLR-----------KGDIVLSDELNHA 128 (385)
T ss_pred ccCcccCCcHHHHHHHHHHHHHhCCCc--------EEEE-CcHHHHHHHHHHHhCC-----------CCCEEEEEccccH
Confidence 344444567788899999999988642 3444 5558888876665432 5567888889999
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 204 ALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 204 s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
++..++...|+ +++.++ .+|++++++.+++... .+..+|+.....+++|.+.|+++|+++|++||+|+
T Consensus 129 ~~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~l 196 (385)
T TIGR01825 129 SIIDGLRLTKA---TKKIYK-------HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVT 196 (385)
T ss_pred HHHHHHHhcCC---ceEEeC-------CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEE
Confidence 99988888887 666553 4788999998875421 12346777777889999999999999999999999
Q ss_pred EcccccccccccCccc--cccccCC-CCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCccccccccc
Q 010125 284 HVDAAYAGSACICPEF--RHFIDGV-EGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTN-PEYLKNKATESMQVV 359 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~--~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~-~~yl~~~~~~~~~~~ 359 (517)
++|++|+.+.+..... ...+ ++ ...|.+..++||+++.+ .|+++.+ ++.. +.+... ..|....
T Consensus 197 i~De~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~--gG~~~~~-~~~~-~~~~~~~~~~~~~~-------- 263 (385)
T TIGR01825 197 YVDDAHGSGVMGEAGRGTVHHF-GLEDKVDIQVGTLSKAIGVV--GGYAAGH-KELI-EYLKNRARPFLFST-------- 263 (385)
T ss_pred EEECcccccCcCCCCCccHhhc-CCCcCCcEEEEeccHHhhcC--CCEEecC-HHHH-HHHHHhCccccccC--------
Confidence 9999997654421110 0011 11 35788889999999754 3665543 3322 222111 1121100
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhh
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLK 439 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~ 439 (517)
........++..+++.+.. ..+..++..++++++.+.|++. ++++. .+..+++.+...+.
T Consensus 264 --------~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~-------- 323 (385)
T TIGR01825 264 --------AQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTG-GSETPITPVVIGDE-------- 323 (385)
T ss_pred --------CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEECCH--------
Confidence 0000111233334443311 1346677778899999999886 77765 34445555554221
Q ss_pred hhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE----CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 440 TKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL----GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.....+.+.|.++|+.. .+..+ .+..++|+++ +..++++|+++++++|+++.++
T Consensus 324 ---------------~~~~~~~~~L~~~gi~v-~~~~~~~~~~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 324 ---------------KAAQEFSRRLFDEGIFA-QSIVFPTVPRGTARIRNIP-TAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred ---------------HHHHHHHHHHHHCCcEE-cccCCCCCCCCCceEEEEE-cCCCCHHHHHHHHHHHHHHHHH
Confidence 12356777777777643 33211 2446899987 4567888999999999988754
No 131
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.84 E-value=3.6e-18 Score=157.11 Aligned_cols=302 Identities=15% Similarity=0.124 Sum_probs=217.0
Q ss_pred HHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCE
Q 010125 140 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNF 219 (517)
Q Consensus 140 ~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v 219 (517)
+.+++++|++. .-+|.|+.+|-+.+|.+... +++.|++...+||+..-||+..|+ +|
T Consensus 68 ~dlaeFlg~D~---------~R~t~GARe~KfavMhal~~-----------~gd~vV~D~~aHYttyvAAEragl---~v 124 (382)
T COG1103 68 EDLAEFLGMDE---------VRVTAGAREAKFAVMHALCK-----------EGDWVVVDSLAHYTTYVAAERAGL---NV 124 (382)
T ss_pred HHHHHHhCCce---------eeecccchhhHHHHHHHhcc-----------CCCEEEEcCcchHHHHHHHHhcCC---eE
Confidence 33889999874 57899999999877766543 566788888999999999999999 99
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHhHhcC-CcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCcc
Q 010125 220 RAIKTTKSSSYGLSPDSLMAQINSDVEVG-LIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPE 298 (517)
Q Consensus 220 ~~vp~d~~~~~~~d~~~Le~~i~~~~~~g-~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~ 298 (517)
..||....-.+.++++...+.|++.++++ ..|.+.++|++....|.+.|.+.+++||++||+.+.+.+||..+-++...
T Consensus 125 ~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ 204 (382)
T COG1103 125 AEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSG 204 (382)
T ss_pred EecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccc
Confidence 99997544568999999999999887765 77899999999999999999999999999999999999999888776532
Q ss_pred ccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCch-HH
Q 010125 299 FRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSL-KL 377 (517)
Q Consensus 299 ~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~ 377 (517)
+.. ++|+|+.|+||.+.+..+||++-++.... ...+..+..+...... --+.|+-|...+ -+
T Consensus 205 -ke~-----g~DFiVgSGHKsmAAs~PiGvl~~~eE~a-e~V~r~Sg~~~~~KEv----------ellGCT~rGapivTl 267 (382)
T COG1103 205 -KEI-----GADFIVGSGHKSMAASAPIGVLAMSEEWA-EIVLRRSGRAFPKKEV----------ELLGCTVRGAPIVTL 267 (382)
T ss_pred -ccc-----CCCEEEecCccchhccCCeeEEeehhHHH-HHHHhhccccccccee----------eeecccccCchHHHH
Confidence 222 89999999999999888899999986643 2234333232222111 023455433332 22
Q ss_pred HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C-CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHH
Q 010125 378 WFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP-C-HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINE 455 (517)
Q Consensus 378 ~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~-~-~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 455 (517)
.+++-.. .+.. ++.+...+.+++|.+.|+++.|++.+.. | +..++-|..+.- ++
T Consensus 268 mASfP~V-~eRV-krWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f----------------------~e 323 (382)
T COG1103 268 MASFPHV-VERV-KRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVF----------------------HE 323 (382)
T ss_pred HhcCHHH-HHHH-HHHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCchH----------------------HH
Confidence 2222211 2222 3445667789999999999987876653 3 233444433211 22
Q ss_pred HHH-------HHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 456 FNR-------ELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 456 ~~~-------~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
+.+ -|++.|.++|+.-+.+. -..++.+|+ +..+.++++.+++++++++++
T Consensus 324 Iakk~~r~gyFlY~ELK~RgI~GI~~G---~Tk~~K~sv--yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 324 IAKKHKRKGYFLYEELKKRGIHGIQPG---QTKYFKLSV--YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred HHHhCcCCceeeHHHHHhcCccccccC---ceeEEEEEe--ecCCHHHHHHHHHHHHHHHHh
Confidence 222 26677777887544332 246889987 567888999999999998875
No 132
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=5e-18 Score=172.97 Aligned_cols=288 Identities=12% Similarity=0.052 Sum_probs=190.9
Q ss_pred hhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH
Q 010125 130 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA 209 (517)
Q Consensus 130 ~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa 209 (517)
....+++.+++ .++.+++ ..++|+|+++++..++.+..+ +++.|+++++++..+..++
T Consensus 60 ~~~~lr~~ia~----~~~~~~~-------~i~it~G~~~~l~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~ 117 (351)
T PRK14807 60 TAEKLREELAR----YCSVVPT-------NIFVGNGSDEIIHLIMLAFIN-----------KGDVVIYPHPSFAMYSVYS 117 (351)
T ss_pred cHHHHHHHHHH----HhCCCcc-------cEEEecCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHHH
Confidence 34555555544 4577654 689999998887766554422 5567888889988888889
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccc
Q 010125 210 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
+..|+ +++.++++. ++.+|+++++++++... +.+|+++.++|+||.+-+.+++.++|++++.++++|++|
T Consensus 118 ~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~~-----~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y 187 (351)
T PRK14807 118 KIAGA---VEIPVKLKE--DYTYDVGSFIKVIEKYQ-----PKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAY 187 (351)
T ss_pred HHcCC---eEEEeecCC--CCCCCHHHHHHHhhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcc
Confidence 99999 999999874 47899999999986421 236777889999999999999999999999999999999
Q ss_pred ccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccC
Q 010125 290 AGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITL 368 (517)
Q Consensus 290 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 368 (517)
+.+. ........... .-..+..+++|.++ ....+|+++.. +. +.+.+...... +.
T Consensus 188 ~~~~--~~~~~~~~~~~-~~vi~~~S~SK~~~~~GlRiG~~v~~-~~-~~~~~~~~~~~----------------~~--- 243 (351)
T PRK14807 188 FEFY--GNTIVDVINEF-ENLIVLRTLSKAFGLAGLRVGYAVAN-EN-ILKYLNLVKSP----------------YN--- 243 (351)
T ss_pred hhhc--ccchHHHhhhC-CCEEEEecchHhcccchhceeeeecC-HH-HHHHHHHccCC----------------CC---
Confidence 6542 11111111111 12256677999997 55788888753 33 22233211000 00
Q ss_pred CCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccc
Q 010125 369 SRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLS 448 (517)
Q Consensus 369 sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 448 (517)
...+...++...+....+++.+++..++++++.+.|++.+++++. ++..+.+.+++. .
T Consensus 244 ---~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~-~----------------- 301 (351)
T PRK14807 244 ---INSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFK-D----------------- 301 (351)
T ss_pred ---cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcC-C-----------------
Confidence 122333444444434456777777788888899999888888764 555555444442 1
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeee-ECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 449 EEEQINEFNRELLESINASGKAYMTHAV-LGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 449 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
...+.+.|.+.|+....... .....++|++++ +.++.+++++.|+++
T Consensus 302 --------~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 302 --------ADYVYQGLLERGILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKEL 349 (351)
T ss_pred --------HHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHh
Confidence 24566777777865433221 123568999985 456888888888764
No 133
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.83 E-value=1.6e-18 Score=173.12 Aligned_cols=334 Identities=16% Similarity=0.098 Sum_probs=224.3
Q ss_pred HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 108 GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 108 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
....+.+...+.... ...+|-..++|+ ++++.+|.+ .++.+++||.|+.+||.+.--
T Consensus 15 ~~e~~~v~~vl~sg~--i~~G~~v~~FE~----~~ae~~G~k---------~ava~~sgT~AL~laL~al~i-------- 71 (374)
T COG0399 15 EEELAAVQEVLKSGW--LTGGPFVRRFEQ----AFAEYLGVK---------YAVAVSSGTAALHLALLALAI-------- 71 (374)
T ss_pred hHHHHHHHHHHHcCC--eecChHHHHHHH----HHHHHhCCC---------eEEEecChHHHHHHHHHhcCC--------
Confidence 334445555554432 233777888886 566777766 468899999999998875421
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD 267 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id 267 (517)
.+++.|+++..+..+..+++-..|+ ++++|++|++ ++.||++.||++|++.++ +|+..+ ..|...
T Consensus 72 --g~GDeVI~ps~TfvATan~i~~~Ga---~PVFvDid~~-T~nid~~~ie~aIt~~tK------AIipVh---l~G~~~ 136 (374)
T COG0399 72 --GPGDEVIVPSFTFVATANAVLLVGA---KPVFVDIDPD-TLNIDPDLIEAAITPRTK------AIIPVH---LAGQPC 136 (374)
T ss_pred --CCCCEEEecCCchHHHHHHHHHcCC---eEEEEecCCc-ccCCCHHHHHHHcccCCe------EEEEeh---hccCCC
Confidence 1777899999999999999999999 9999999974 689999999999998765 455443 457777
Q ss_pred ChhHHHHHHHHhCCeEEcccccccccccCcccccc-ccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCcc
Q 010125 268 PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPE 346 (517)
Q Consensus 268 pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~ 346 (517)
++++|.+||++||++++.|+|++-+.. ++.. ...+..+-+++|.++|.+.+. ..|++++.|++...+.......
T Consensus 137 dm~~i~~la~~~~l~vIEDaAqa~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~h 211 (374)
T COG0399 137 DMDAIMALAKRHGLPVIEDAAQAHGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNH 211 (374)
T ss_pred CHHHHHHHHHHcCCeEEEEcchhccCe----ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHh
Confidence 999999999999999999999987763 3332 223556778999999999876 7888888887654433211100
Q ss_pred ccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEE
Q 010125 347 YLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCF 426 (517)
Q Consensus 347 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f 426 (517)
-... .. ....+....+-+.+.-.+-+++.....+.+++++++..+++++..+.|++++++.+...+....-.+
T Consensus 212 G~~~-----~~--~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~ 284 (374)
T COG0399 212 GLSR-----DA--VFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAW 284 (374)
T ss_pred CcCC-----Cc--cccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeee
Confidence 0000 00 0111222334444555556666666678899999999999999999999998876654443332222
Q ss_pred EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcE---EEeeee---------------E-----CCEeEE
Q 010125 427 RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKA---YMTHAV---------------L-----GGIYAI 483 (517)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~---------------~-----~g~~~l 483 (517)
.+.+..+. .+ ......+.+.|.+.|+. +..+.. + .....+
T Consensus 285 ~~~~i~~~---------------~~--~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l 347 (374)
T COG0399 285 HLYTILVD---------------EE--GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERIL 347 (374)
T ss_pred eeeEEEec---------------CC--CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeE
Confidence 22211100 00 12235667777777543 111100 0 012356
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 484 RFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 484 R~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
++= +++..+++|++++++.|+++..
T Consensus 348 ~LP-~~p~l~~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 348 SLP-LHPNLSEEDVDRVIEALKEVLG 372 (374)
T ss_pred Ecc-CCCCCCHHHHHHHHHHHHHHhc
Confidence 664 4789999999999999988764
No 134
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.83 E-value=2.2e-18 Score=177.35 Aligned_cols=308 Identities=12% Similarity=0.063 Sum_probs=199.3
Q ss_pred hhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHH--HHHHhccc-CCCCeEEEeCCCCchHHH
Q 010125 130 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDR--VLNKIGRE-NISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 130 ~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~--~~~~~g~~-~~~~~~v~~s~~~H~s~~ 206 (517)
+.+.+.+++.+.|++++|.+. .+++++|..||+.++.+.... .+...+.. ...+++|++....|.|+.
T Consensus 144 G~~~~h~~LE~~LA~f~g~e~---------all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~ 214 (476)
T PLN02955 144 GYTTYHRLLESSLADLKKKED---------CLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASII 214 (476)
T ss_pred cChHHHHHHHHHHHHHHCCCc---------EEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHH
Confidence 344555666677888888764 588888999998777654210 00000000 014567888999999999
Q ss_pred HHHHHcCC-CCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEc
Q 010125 207 KAAQIVGI-DVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 207 kaa~~~G~-g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhv 285 (517)
.++++... |..+++.++. -|+++|+++++.... ...+|+.....++.|.+-|+++|.++|++||++|+|
T Consensus 215 dG~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiV 284 (476)
T PLN02955 215 DGVRLAERQGNVEVFVYRH-------CDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVI 284 (476)
T ss_pred HHHHhccccCCceEEEeCC-------CCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEE
Confidence 99998832 1116777764 389999999976532 234667777788999999999999999999999999
Q ss_pred ccccccccccCcccccccc--C-CCCCCeeeeccccccCCCCcceEEEEeCchhHHhhh-cCCccccCCccccccccccC
Q 010125 286 DAAYAGSACICPEFRHFID--G-VEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSL-STNPEYLKNKATESMQVVDY 361 (517)
Q Consensus 286 DaA~g~~~~~~~~~~~~~~--g-~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~ 361 (517)
|.||+.+.+- +..+.... + ....|.++.++.|.++.. .|++..++ .. .+.+ .....|++...
T Consensus 285 DEAH~~Gv~G-~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~gs~-~~-~~~l~~~~~~~ifSta--------- 350 (476)
T PLN02955 285 DDAHGTFVCG-ENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIACSK-KW-KQLIQSRGRSFIFSTA--------- 350 (476)
T ss_pred cccccCceec-CCCCcHHHHhCCCCCCcEEEEeCccchhcc--CceeecHH-HH-HHHHHHhCCCCeeccc---------
Confidence 9999877653 22222211 2 246889999999998753 45555543 22 2333 22334444321
Q ss_pred CCccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhh
Q 010125 362 KDWQITLSRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKT 440 (517)
Q Consensus 362 ~~~~~~~sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~ 440 (517)
-+ ..+.+..++++.+-.+ ..+.+++.++.++|++.+ ++.+ .++++.+.+..
T Consensus 351 --------lpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~---------- 402 (476)
T PLN02955 351 --------IPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGN---------- 402 (476)
T ss_pred --------ccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCC----------
Confidence 11 1112233344433222 246677888888888742 4432 35677666543
Q ss_pred hhhccccchHHHHHHHHHHHHHHHHhcCcEE---EeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 441 KYVNCLLSEEEQINEFNRELLESINASGKAY---MTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
+.....+.++|.++|... ..|++..|...+|++++. ..+++||++++++|.++.+.+.
T Consensus 403 -------------~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA-~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 403 -------------QEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSA-AHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred -------------HHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCC-CCCHHHHHHHHHHHHHHHhhhc
Confidence 234567788888999752 334555677889999965 5566799999999998876543
No 135
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.83 E-value=3.4e-18 Score=180.04 Aligned_cols=327 Identities=10% Similarity=0.086 Sum_probs=211.9
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH
Q 010125 125 WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA 204 (517)
Q Consensus 125 ~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s 204 (517)
|....+...+.+++++|+.+.+|.+... ....+++|+|+++++...+.+..+ +++.|++.+++|..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v---~~~~Iiit~Ga~~al~~l~~~l~~-----------pGd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTF---DPNKLVLTAGATSANETLMFCLAE-----------PGDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCc---ChHHeEEccChHHHHHHHHHHhCC-----------CCCEEEECCCCCCc
Confidence 4444466789999999999887743110 012689999999987766655432 66778999999998
Q ss_pred HHHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhC
Q 010125 205 LQKAAQ-IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFG 280 (517)
Q Consensus 205 ~~kaa~-~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~g 280 (517)
+...+. ..|+ +++.||++.++++.+|+++|++++++..+.+.++.+|+++.++||||.+-+ +++|.++|++||
T Consensus 148 ~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~ 224 (468)
T PLN02450 148 FDRDLKWRTGV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKN 224 (468)
T ss_pred hHHHHhhcCCc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCC
Confidence 888777 5788 999999875556889999999999876555656677888899999999855 677888899999
Q ss_pred CeEEcccccccccccCccccccccCC--------CCC--CeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccC
Q 010125 281 IWVHVDAAYAGSACICPEFRHFIDGV--------EGA--DSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLK 349 (517)
Q Consensus 281 i~lhvDaA~g~~~~~~~~~~~~~~g~--------~~a--Dsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~ 349 (517)
+|+++|.+|+...+..+.+...+.-+ ... -.+..++.|.++ ..+.+|+++..++... ..+.....|..
T Consensus 225 ~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~~~~~~~ 303 (468)
T PLN02450 225 IHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATKMSSFGL 303 (468)
T ss_pred cEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHH-HHHHHHhhcCC
Confidence 99999999987544322221111100 011 145677999996 6789999988654322 22211111100
Q ss_pred CccccccccccCCCccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEE
Q 010125 350 NKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGV-----ANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVV 424 (517)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v 424 (517)
...+...++...+.. .-+++..++..+..+.+.+.|++. ++.+. +|+.+++
T Consensus 304 ----------------------~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~-~~~~g~f 359 (468)
T PLN02450 304 ----------------------VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL-KSNAGLF 359 (468)
T ss_pred ----------------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCceEE
Confidence 011222333333322 235667778888888899999887 77654 5666644
Q ss_pred E-EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHH
Q 010125 425 C-FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVVA 500 (517)
Q Consensus 425 ~-f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l 500 (517)
+ +++... . .... -....++.+++. +.|+...++..+. +..++|++++. .+++++++.
T Consensus 360 lwi~l~~~-~---------------~~~~-~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~--~~~~~l~~~ 420 (468)
T PLN02450 360 CWVDMRHL-L---------------KSNT-FEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN--MSEETLDLA 420 (468)
T ss_pred EEEEchHh-c---------------CcCC-chHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC--CCHHHHHHH
Confidence 4 444211 0 0000 011134555554 4576655544443 35799999964 356799999
Q ss_pred HHHHHHHHHHHH
Q 010125 501 WTVVQQHLEAFQ 512 (517)
Q Consensus 501 ~~~l~~~~~~l~ 512 (517)
++.|+++.++..
T Consensus 421 l~ri~~~l~~~~ 432 (468)
T PLN02450 421 MKRLKSFVESDS 432 (468)
T ss_pred HHHHHHHHHhcc
Confidence 999988876543
No 136
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.83 E-value=2.3e-18 Score=161.53 Aligned_cols=346 Identities=10% Similarity=0.038 Sum_probs=233.0
Q ss_pred eCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHH
Q 010125 99 YFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR 178 (517)
Q Consensus 99 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar 178 (517)
+.|++.+.+.. +..+++.+...+ .+|.+..+.+++.+-+...|...... --++.++|+.+.-.|+....
T Consensus 21 ~gPGPsnl~~~----V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~~------tf~isgsGh~g~E~al~N~l 89 (385)
T KOG2862|consen 21 LGPGPSNLSGR----VQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANAQ------TFVISGSGHSGWEAALVNLL 89 (385)
T ss_pred ecCCCcCCCHH----HHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCCc------eEEEecCCcchHHHHHHhhc
Confidence 34565555544 445555555453 67999999999999999998876543 34777788877776665543
Q ss_pred HHHHHHhcccCCCCeEEEeCCCCchH--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEe
Q 010125 179 DRVLNKIGRENISKLIVYGSDQTHCA--LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCA 256 (517)
Q Consensus 179 ~~~~~~~g~~~~~~~~v~~s~~~H~s--~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~ 256 (517)
. |++.|++-...-.+ +...++.+|+ +|..|+.+.. .....+.+++++.+.+ |.+|++
T Consensus 90 e-----------Pgd~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G--~~~~le~i~~~lsqh~-----p~~vfv 148 (385)
T KOG2862|consen 90 E-----------PGDNVLVVSTGTWGQRAADCARRYGA---EVDVVEADIG--QAVPLEEITEKLSQHK-----PKAVFV 148 (385)
T ss_pred C-----------CCCeEEEEEechHHHHHHHHHHhhCc---eeeEEecCcc--cCccHHHHHHHHHhcC-----CceEEE
Confidence 3 55555554454444 4456788899 9999998864 4889999999998753 679999
Q ss_pred eccCCccccccC-hhHHHHHHHHhCCeEEcccccccccc--cCccccccccCCCCCCeeeeccccccCCCCcceEEEEeC
Q 010125 257 TIGTTAITAVDP-LKPLCDVAKQFGIWVHVDAAYAGSAC--ICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKD 333 (517)
Q Consensus 257 t~gtt~~G~idp-l~eI~~i~~~~gi~lhvDaA~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~ 333 (517)
++|.|.||..+| ++.+.++|++|++.|.||+.-+.+.. ..+++ ++|..-...+|.+++|.|.+++...+
T Consensus 149 ~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew--------gVDvaytgSQKaL~aP~GLsiisfS~ 220 (385)
T KOG2862|consen 149 THGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW--------GVDVAYTGSQKALGAPAGLSIISFSD 220 (385)
T ss_pred EecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh--------cccEEEecchhhcCCCCCcceeecCH
Confidence 999999999999 78889999999999999985544433 33333 89999999999999999999977766
Q ss_pred chhHHhhhcCC--ccccCCc-c----ccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHH
Q 010125 334 PRALVSSLSTN--PEYLKNK-A----TESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERL 406 (517)
Q Consensus 334 ~~~~~~~~~~~--~~yl~~~-~----~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~ 406 (517)
+....-.-+.. ..|.++. . ....+.+....+++... .-..+-++|..+-.+|+++.++++.+++++++..
T Consensus 221 ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~---lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~ 297 (385)
T KOG2862|consen 221 KALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQ---LLYSLRAALALIAEEGLENSWRRHREMSKWLKLS 297 (385)
T ss_pred HHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 64421111111 1222111 0 00001111111111100 1146667888888999999999999999999999
Q ss_pred HhcCCCeEEec---CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeee-eECCEeE
Q 010125 407 VSGDKRFEIVF---PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHA-VLGGIYA 482 (517)
Q Consensus 407 l~~~~~~~l~~---~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~ 482 (517)
|++. |+++.. ++.++.+.--..|.. ..-..+..++.+++.+.+.+. ..-...+
T Consensus 298 l~~~-GLq~fv~~e~~rlptvttv~vp~g----------------------vDw~dVv~~~~~~~~vei~gglg~~~gKv 354 (385)
T KOG2862|consen 298 LEAL-GLQLFVVDEELRLPTVTTVKVPYG----------------------VDWKDVVAYAMSHYVVEIGGGLGPTVGKV 354 (385)
T ss_pred HHHh-CccceecChhhccCcceeeecCCC----------------------CCHHHHHHHHHHhcCEEeccccCCCcccE
Confidence 9987 777653 233344433333332 113456666777766655442 1122468
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 483 IRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 483 lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
+||.++..+.+-+.|+..++.|+....+
T Consensus 355 ~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 355 FRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred EEEEEeeccCCcHHHHHHHHHHHHHHhh
Confidence 9999988888888999999888776543
No 137
>PRK08068 transaminase; Reviewed
Probab=99.83 E-value=3.8e-18 Score=176.33 Aligned_cols=323 Identities=10% Similarity=0.011 Sum_probs=207.0
Q ss_pred HHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCC-ceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 109 FLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 109 ~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
.+.+.+...++.. ...|...++..++.+++++|+.+.+|.+-+ .. ..++|+|+++++..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~-----~~~~i~it~G~~~~l~~~~~~~~~------- 116 (389)
T PRK08068 49 HIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLD-----PETEVAILFGGKAGLVELPQCLMN------- 116 (389)
T ss_pred HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----CCccEEEcCCcHHHHHHHHHHhCC-------
Confidence 3455555555432 335666677899999999999888886432 12 578999999888765544321
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|++.+++|..+..+++..|+ +++.+|++.++++.+|+++|++.+.+.+ .+|+++.++||||.+
T Consensus 117 ----~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~~------~~v~l~~P~NPTG~~ 183 (389)
T PRK08068 117 ----PGDTILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAEKA------KLMYLNYPNNPTGAV 183 (389)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHHHHHHhccccc------eEEEEECCCCCCCCc
Confidence 566788899999999999999999 9999999764457899999999886433 377778899999998
Q ss_pred cCh---hHHHHHHHHhCCeEEcccccccccccCccccccccCC--CCCCeeeeccccccC-CCCcceEEEEeCchhHHhh
Q 010125 267 DPL---KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV--EGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSS 340 (517)
Q Consensus 267 dpl---~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~--~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~ 340 (517)
-+. ++|+++|++||+++++|.+|+............+... ..-..++.++.|.++ ....+|+++. ++... ..
T Consensus 184 ~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~-~~ 261 (389)
T PRK08068 184 ATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVI-EA 261 (389)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHH-HH
Confidence 664 6888899999999999999966433211111111111 122356678999996 5567888875 33332 22
Q ss_pred hcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 341 LSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 341 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
+.....++. .+ ..+....++...+ +.+.+++.+++..+.++++.+.|++. ++.+. +
T Consensus 262 l~~~~~~~~------------------~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-~ 319 (389)
T PRK08068 262 INLLQDHLF------------------VS--LFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVD-A 319 (389)
T ss_pred HHHHHhhcc------------------CC--CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-C
Confidence 211111110 00 0111112222222 34556777888888899999999887 67654 5
Q ss_pred CCeeEE-EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcH
Q 010125 419 CHFAVV-CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFATGATLTEK 494 (517)
Q Consensus 419 ~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~~~~~~t~~ 494 (517)
|..+++ ++.+.+. ....++.+.|.+ .|+....+..+. +..++|+++.. .+
T Consensus 320 ~~g~~~~~v~~~~~-----------------------~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~---~~ 373 (389)
T PRK08068 320 PKGSFFAWMPVPKG-----------------------YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLT---DE 373 (389)
T ss_pred CCeeEEEEEECCCC-----------------------CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcC---CH
Confidence 555554 4454321 012456677765 576554443332 35699999952 45
Q ss_pred HHHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQQ 506 (517)
Q Consensus 495 ~di~~l~~~l~~ 506 (517)
+.+...++.|.+
T Consensus 374 ~~l~~al~~l~~ 385 (389)
T PRK08068 374 ERLREAVERIGK 385 (389)
T ss_pred HHHHHHHHHHHH
Confidence 566666666654
No 138
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=5.4e-18 Score=173.08 Aligned_cols=289 Identities=12% Similarity=0.097 Sum_probs=187.9
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCC
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
.++++.+++.+|.+++ ..++|+|+++++..++.+. . ++.+++. .+++..+...++..|+
T Consensus 58 ~~lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~l-~-----------~g~viv~-~P~y~~~~~~~~~~g~- 116 (356)
T PRK08056 58 RHLHQALARHHQVPAS-------WILAGNGETESIFAVVSGL-K-----------PRRAMIV-TPGFAEYRRALQQVGC- 116 (356)
T ss_pred HHHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCEEEe-CCCcHHHHHHHHHcCC-
Confidence 3455666666788765 6899999988876655432 1 3334444 5778788888999999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhCCeEEcccccccc
Q 010125 216 VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 216 ~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~gi~lhvDaA~g~~ 292 (517)
+++.+|+++++++.+| +++++.+.+.+ .+|+++.++|+||.+-+ +++|+++|++||+|+++|++|..+
T Consensus 117 --~~~~v~~~~~~~~~~~-~~~~~~~~~~~------k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 187 (356)
T PRK08056 117 --EIRRYSLREADGWQLT-DAILEALTPDL------DCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDF 187 (356)
T ss_pred --eEEEEecccccCCCcc-HHHHHhccCCC------CEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhcc
Confidence 9999998754445666 34545554322 36778999999999987 888999999999999999999765
Q ss_pred cccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC
Q 010125 293 ACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR 371 (517)
Q Consensus 293 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 371 (517)
..........+... ....++.+++|+++ ....+|+++..++.... .+... .. .++
T Consensus 188 ~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~-~l~~~---~~-------------~~~------ 243 (356)
T PRK08056 188 IPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVA-RMRRQ---QM-------------PWS------ 243 (356)
T ss_pred CCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHH-HHHHh---CC-------------CCc------
Confidence 43211111122222 24577889999999 66889998876544322 22110 00 000
Q ss_pred CCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchH
Q 010125 372 FRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEE 450 (517)
Q Consensus 372 ~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 450 (517)
...+...++...+ +.+..+++.++..+.++++.+.|++++++.+. ++..+.+.+++...
T Consensus 244 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~------------------- 303 (356)
T PRK08056 244 INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP------------------- 303 (356)
T ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC-------------------
Confidence 0123333333333 33445566677788899999999988888765 55555554444321
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEeeeeECC--EeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 451 EQINEFNRELLESINASGKAYMTHAVLGG--IYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 451 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~g--~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
..++.+.|.+.|+....+..+.+ ..++|+++. +.++.++++++|+++.
T Consensus 304 ------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 304 ------DIDLQRALLTQRILIRSCANYPGLDSRYYRVAIR----SAAENERLLAALRNVL 353 (356)
T ss_pred ------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEEc----CHHHHHHHHHHHHHHH
Confidence 13566777778876555544433 358999985 4568888888887653
No 139
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=6.5e-18 Score=172.28 Aligned_cols=310 Identities=11% Similarity=0.086 Sum_probs=200.3
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
|..+.+.+...+.. ...|. .+...++.+++++| ++++++ ..++|+|+++++..++.+. .
T Consensus 34 p~~~~~a~~~~~~~-~~~Y~-~~~~~~lr~~ia~~----~~~~~~-------~i~it~Ga~~~l~~~~~~~-~------- 92 (354)
T PRK06358 34 PESLKQAITENLDK-LVEYP-DPDYLELRKRIASF----EQLDLE-------NVILGNGATELIFNIVKVT-K------- 92 (354)
T ss_pred CHHHHHHHHHHHHh-hhcCC-CccHHHHHHHHHHH----hCCChh-------hEEECCCHHHHHHHHHHHh-C-------
Confidence 33444444443322 22343 34445555555555 477655 7899999999887665432 1
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
++ .|++.++++..+..+++..|+ +++.+|++.++++.+| +++.+.+... +.+|+++.++|+||.+
T Consensus 93 ----~~-~v~i~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~ 157 (354)
T PRK06358 93 ----PK-KVLILAPTFAEYERALKAFDA---EIEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQL 157 (354)
T ss_pred ----CC-cEEEecCChHHHHHHHHHcCC---eeEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCc
Confidence 22 466788999999999999999 9999999765557889 6665555432 3367778999999998
Q ss_pred cC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCC--eeeeccccccC-CCCcceEEEEeCchhHHhh
Q 010125 267 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGAD--SFSLNAHKWFF-ATLDCCCLWVKDPRALVSS 340 (517)
Q Consensus 267 dp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aD--si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~ 340 (517)
-+ +++|+++|++||+|+++|++|..+.... .....+..+...+ .+..++.|.++ ....+|+++..++.... .
T Consensus 158 ~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~-~ 235 (354)
T PRK06358 158 ISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN-ETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAE-K 235 (354)
T ss_pred cCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc-cchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHH-H
Confidence 65 8888889999999999999997655322 1111111122222 45667999998 67889999875543322 2
Q ss_pred hc-CCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 341 LS-TNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGV-ANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 341 ~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
+. ....+ ....+..+++...+.. +.+.+.++...+.++.+.+.|++.+++++. +
T Consensus 236 ~~~~~~~~-----------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~ 291 (354)
T PRK06358 236 LLQMREPW-----------------------SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY-K 291 (354)
T ss_pred HHHhCCCC-----------------------cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-C
Confidence 21 11100 0123334444444433 334677778888899999999988887765 5
Q ss_pred CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHH
Q 010125 419 CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEKRH 496 (517)
Q Consensus 419 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~d 496 (517)
|..+.+++++.+ ..++.+.|.+.|+....+..+. +..++|+++. +.++
T Consensus 292 ~~g~f~~~~~~~--------------------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~~----~~~~ 341 (354)
T PRK06358 292 PSVNFIFFKLEK--------------------------PIDLRKELLKKGILIRSCSNYRGLDENYYRVAVK----SRED 341 (354)
T ss_pred CcceEEEEEcCc--------------------------hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHH
Confidence 666655554431 1456777777887666655553 3468999985 5668
Q ss_pred HHHHHHHHHHHH
Q 010125 497 VVVAWTVVQQHL 508 (517)
Q Consensus 497 i~~l~~~l~~~~ 508 (517)
.++++++|+++.
T Consensus 342 ~~~l~~~l~~~~ 353 (354)
T PRK06358 342 NKKLLKALEVIL 353 (354)
T ss_pred HHHHHHHHHHHh
Confidence 999999887653
No 140
>PRK07683 aminotransferase A; Validated
Probab=99.83 E-value=6e-18 Score=174.68 Aligned_cols=328 Identities=11% Similarity=0.071 Sum_probs=214.7
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+...+......|...++..++++++++|+.+..|.+-+. ...+++|+|+++|+..++.+...
T Consensus 43 ~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~----~~~I~~t~G~~~al~~~~~~l~~------- 111 (387)
T PRK07683 43 PSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP----ESEIIVTIGASEAIDIAFRTILE------- 111 (387)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC-------
Confidence 3456666666665555567767788999999999998887764221 01689999999998776654422
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|+++.+++..+..+++.+|+ +++.+|.+. +++.+|++++++.+++.+ .+|+++.++|+||.+
T Consensus 112 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~-~~~~~~~~~l~~~~~~~~------~~i~i~~p~NPtG~~ 177 (387)
T PRK07683 112 ----PGTEVILPAPIYPGYEPIIRLCGA---KPVFIDTRS-TGFRLTAEALENAITEKT------RCVVLPYPSNPTGVT 177 (387)
T ss_pred ----CCCEEEEcCCCccchHHHHHHcCC---EEEEeecCc-ccCCCCHHHHHHhcCcCc------eEEEEeCCCCCCCcC
Confidence 456788888988888999999999 999999875 357889999999886543 367888999999997
Q ss_pred c---ChhHHHHHHHHhCCeEEcccccccccccCcccccccc--CCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhh
Q 010125 267 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID--GVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSS 340 (517)
Q Consensus 267 d---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~--g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~ 340 (517)
- ++++|+++|+++|+++++|++|+.+.... ....... +...-..+..++.|.++ ....+|+++.... . .+.
T Consensus 178 ~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~~-l-~~~ 254 (387)
T PRK07683 178 LSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ-PHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPSY-L-AKH 254 (387)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecccccceeCC-CcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCHH-H-HHH
Confidence 4 48999999999999999999998664321 1111111 11122356778999998 5567888876432 2 222
Q ss_pred hcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 341 LSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 341 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
+.....|.. .+. ..+...++...+ |...+++..++..++++++.+.|++. ++.+. +
T Consensus 255 ~~~~~~~~~-----------------~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~ 312 (387)
T PRK07683 255 ILKVHQYNV-----------------TCA---SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE-K 312 (387)
T ss_pred HHHHHHhcc-----------------CCC---ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-C
Confidence 211111111 000 112222222222 44455666777788888999999876 66654 5
Q ss_pred CCeeEEEEEecCC-CcchhhhhhhhhccccchHHHHHHHHHHHHHH-HHhcCcEEEeeeeEC--CEeEEEEEecCCCCcH
Q 010125 419 CHFAVVCFRVSPS-PVLMDKLKTKYVNCLLSEEEQINEFNRELLES-INASGKAYMTHAVLG--GIYAIRFATGATLTEK 494 (517)
Q Consensus 419 ~~~~~v~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~ 494 (517)
|+.+.+.|...+. .. ...++... +.+.|+...++..+. +..++|++++. ++
T Consensus 313 ~~~~~~~~~~~~~~~~----------------------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~---~~ 367 (387)
T PRK07683 313 PTGAFYLFPSIGHFTM----------------------SSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAY---SI 367 (387)
T ss_pred CCeeEEEEEecccCCC----------------------CHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecC---CH
Confidence 6666655543331 10 01233333 445677655544432 35799999963 57
Q ss_pred HHHHHHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQQHLE 509 (517)
Q Consensus 495 ~di~~l~~~l~~~~~ 509 (517)
+++.+++++|.++.+
T Consensus 368 ~~~~~al~~l~~~l~ 382 (387)
T PRK07683 368 ETLKEGLDRLEAFLQ 382 (387)
T ss_pred HHHHHHHHHHHHHHH
Confidence 788888888887654
No 141
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.83 E-value=4.8e-19 Score=179.30 Aligned_cols=307 Identities=10% Similarity=0.023 Sum_probs=199.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEc-CCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ-GTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
++...++-+++.+.+++++|.+.+. ..+++ +|||+|+..++...... +.+.+++..+...|.. .
T Consensus 32 ~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgT~a~ea~~~nl~~~--------~~~~l~i~~G~fg~r~-~ 96 (349)
T TIGR01364 32 SKEFEAVANEAESDLRELLNIPDNY------EVLFLQGGATGQFAAVPLNLLAE--------GKVADYIVTGAWSKKA-A 96 (349)
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhcCCC--------CCeEEEEECCHHHHHH-H
Confidence 3455688889999999999986442 45566 45999987776654211 1133455555555554 5
Q ss_pred HHHHHcCCCCCCEEEEecCCCC--CcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 207 KAAQIVGIDVKNFRAIKTTKSS--SYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 207 kaa~~~G~g~~~v~~vp~d~~~--~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
+.|+..|+ +..+..+... .-..++++++. ++ .+.+|.+++..|+||...| ++++.+++.++
T Consensus 97 ~~a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~~------~~~~v~~th~ETstGv~~~-----~l~~~~~~l~i 159 (349)
T TIGR01364 97 KEAKKYGV----VNVVASGKEGNYTKIPDPSTWEI--SE------DAAYVHYCANETIHGVEFR-----ELPDVKNAPLV 159 (349)
T ss_pred HHHHHhCC----cEEEeccccCCCCCCCCHHhcCC--CC------CCCEEEEcCCCCcccEecc-----eecccCCCeEE
Confidence 66677776 3344432111 11456665552 22 2458999999999999876 67777899999
Q ss_pred cccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCc
Q 010125 285 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDW 364 (517)
Q Consensus 285 vDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 364 (517)
||++.+.+....+- +..|.++++.||+++ |.|.|+++++++...+ .-...+.|...... ....
T Consensus 160 VDavss~g~~~id~--------~~~d~~~~ssqK~lg-P~Glg~l~~s~~~~~~-~~~~~~~~~~~~~~-------~~~~ 222 (349)
T TIGR01364 160 ADMSSNILSRPIDV--------SKFGLIYAGAQKNIG-PAGLTVVIVRKDLLGR-ASRITPSMLNYKIH-------AEND 222 (349)
T ss_pred EEccccccCccCCH--------HHccEEEEecccccC-CCceEEEEECHHHHhh-cccCCCCcchHHHH-------HhcC
Confidence 99999888776542 145699999999986 8899999998765421 11111122110000 0000
Q ss_pred cccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C--Ce-eEEEEEecCCCcchhhh
Q 010125 365 QITLSRR-FRSLKLWFVIRNYGVA-NLRHFLRSHVNMAKLFERLVSGDKRFEIVFP-C--HF-AVVCFRVSPSPVLMDKL 438 (517)
Q Consensus 365 ~~~~sr~-~~al~~~~~l~~~g~~-g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~-~--~~-~~v~f~~~~~~~~~~~~ 438 (517)
...++-. ...+++..+++.+-.+ |++++.+++..+++++++.|++++++..... + .+ .+++|.+.+.
T Consensus 223 ~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~------- 295 (349)
T TIGR01364 223 SMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE------- 295 (349)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh-------
Confidence 0011111 1335777788888777 7999999999999999999999988765532 2 23 4578876532
Q ss_pred hhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 439 KTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
.+..++++.+.++|. ++..... ....+|+|+. +.++++||++++++|+++.+
T Consensus 296 ----------------~~~~~~~~~~~~~Gi-~~~~~~~-~~g~vRvS~~-~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 296 ----------------ELEKRFLKEAEERGL-VSLKGHR-SVGGMRASIY-NAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred ----------------hHhHHHHHHHHHCCC-cccCCcc-ccCeeEEECc-CCCCHHHHHHHHHHHHHHHH
Confidence 123566677778898 5443322 1247999995 57788899999999998754
No 142
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.83 E-value=7e-19 Score=179.29 Aligned_cols=309 Identities=12% Similarity=0.005 Sum_probs=196.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEc-CCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH-
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ-GTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA- 204 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s- 204 (517)
-++...++-+++.+.+++++|.+++. ..+|+ +|||.++..++..... ++ .+.++...|.+
T Consensus 35 r~~~f~~~~~~~r~~l~~l~~~~~~~------~v~f~~gs~T~a~~~~~~~l~~-----------~~-~l~i~~G~~~~~ 96 (361)
T TIGR01366 35 RQAPVKNLVGRVREGLAELFSLPDGY------EVILGNGGATAFWDAATFGLIE-----------KK-SLHLSFGEFSSK 96 (361)
T ss_pred CChHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchhHHHHHHHHhccc-----------cc-ccEEecCHHHHH
Confidence 45677788889999999999996542 56664 7799998877755421 11 23333344432
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 205 LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 205 ~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
+.+.+....... ++..+++++. ..++. .+.++ +.+|++++.+|.+|.+.|+++| ++++|+.++
T Consensus 97 ~~~~a~~~~~~~-~~~~~~~~~~--~~~~~-----~~~~~------~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~i 159 (361)
T TIGR01366 97 FAKAVKLAPWLG-EPIIVTADPG--SAPEP-----QADPG------VDVIAWAHNETSTGVAVPVRRP---EGSDDALVV 159 (361)
T ss_pred HHHHHHhhhccC-CceEEecCCC--CCCCC-----ccCCC------CCEEEEcccCCccceecccccc---cccCCCeEE
Confidence 444555532211 5777777542 23333 22222 3489999999999999999998 589999999
Q ss_pred cccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC------CccccCCcccccccc
Q 010125 285 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST------NPEYLKNKATESMQV 358 (517)
Q Consensus 285 vDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~------~~~yl~~~~~~~~~~ 358 (517)
||++++.+....+- +.+|.+++++||+++.|.|.++++++++.. .+.... .+.|+....
T Consensus 160 VDavqs~g~~~idv--------~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~~-~~~~~~~~~~~~~p~~~d~~~------ 224 (361)
T TIGR01366 160 IDATSGAGGLPVDI--------AETDVYYFAPQKNFASDGGLWLAIMSPAAL-ERIEAIAASGRWVPEFLSLPT------ 224 (361)
T ss_pred EEcCccccCCCCCH--------HHCCEEEEEchhhcCCCCceEEEEECHHHH-hhhhcccCCCCCCchhhhHHH------
Confidence 99999888776642 248999999999999887777777776533 211110 011221100
Q ss_pred ccCCCccccCCCCC-----CchHHHHHHHHhcHH-HHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C--CeeE-EEEEe
Q 010125 359 VDYKDWQITLSRRF-----RSLKLWFVIRNYGVA-NLRHFLRSHVNMAKLFERLVSGDKRFEIVFP-C--HFAV-VCFRV 428 (517)
Q Consensus 359 ~~~~~~~~~~sr~~-----~al~~~~~l~~~g~~-g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~-~--~~~~-v~f~~ 428 (517)
......+.+... ..+.+-.+++.+-.+ |++.+.+++.++++++++.+.+.+.++++.. + .+.. .++.+
T Consensus 225 --~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~~ 302 (361)
T TIGR01366 225 --AVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTIDF 302 (361)
T ss_pred --HHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEEC
Confidence 000011111111 113566777777666 6899999999999999999999876776532 1 1222 23444
Q ss_pred cCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 429 SPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
. .+ .....+.+.|.++|+....+...-+...+|+++++ +++.+||++++++|+++.
T Consensus 303 ~-~g----------------------~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~-~~t~~di~~l~~al~~~~ 358 (361)
T TIGR01366 303 V-DD----------------------IDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFP-AIDPDDVEALTECVDWVV 358 (361)
T ss_pred C-Cc----------------------cCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCC-CCCHHHHHHHHHHHHHHH
Confidence 2 31 11345667777778754332211124579999975 678889999999999987
Q ss_pred HHH
Q 010125 509 EAF 511 (517)
Q Consensus 509 ~~l 511 (517)
+++
T Consensus 359 ~~~ 361 (361)
T TIGR01366 359 ERL 361 (361)
T ss_pred hhC
Confidence 653
No 143
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.83 E-value=1.4e-17 Score=171.58 Aligned_cols=311 Identities=12% Similarity=0.065 Sum_probs=189.9
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
.....++| +.+++++|.+ ..+++++|+.|+..++.+..+ +++.|++++..|.|+..
T Consensus 42 ~~~~~~LE----~~lA~~~g~e---------~al~~~sG~~a~~~~i~~l~~-----------~GD~Vl~~~~~h~s~~~ 97 (392)
T PLN03227 42 IDAHLELE----QCMAEFLGTE---------SAILYSDGASTTSSTVAAFAK-----------RGDLLVVDRGVNEALLV 97 (392)
T ss_pred hHHHHHHH----HHHHHHhCCC---------cEEEecCcHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHH
Confidence 34444555 4566666665 347777778888766655422 67789999999999999
Q ss_pred HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHh--------cCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 208 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVE--------VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 208 aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~--------~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
++.+.+. +++.++.. |++++++.++.... ...++.+|++....+++|.+-|+++|.++|++|
T Consensus 98 ~~~l~~~---~~~~~~~~-------d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~ 167 (392)
T PLN03227 98 GVSLSRA---NVRWFRHN-------DMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEF 167 (392)
T ss_pred HHHHcCC---eEEEeCCC-------CHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHc
Confidence 9888887 77777653 45555554433221 112345788888888999999999999999999
Q ss_pred CCeEEcccccccccccCccccc---c--ccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccc
Q 010125 280 GIWVHVDAAYAGSACICPEFRH---F--IDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKAT 353 (517)
Q Consensus 280 gi~lhvDaA~g~~~~~~~~~~~---~--~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~ 353 (517)
|+++++|.+|+.+.+ ....+. . +....++|.++.+.+|.++ |. .|++..+ ++.. +.+.. ...+.
T Consensus 168 g~~livDe~~~~g~~-g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~-gg~v~~~-~~~~-~~~~~~~~~~~----- 237 (392)
T PLN03227 168 HYRLILDESFSFGTL-GKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SV-GGMTVGS-EEVV-DHQRLSGSGYC----- 237 (392)
T ss_pred CCEEEEECccccccc-CCCCCcHHHHcCCCCCCCceEEEeechhhhh-cc-CcEEecC-HHHH-HHHHHhCcCcc-----
Confidence 999999999973322 211111 1 1112468999999999876 32 3444443 3222 22211 11111
Q ss_pred cccccccCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE----------EecCCCee
Q 010125 354 ESMQVVDYKDWQITLSRRFRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFE----------IVFPCHFA 422 (517)
Q Consensus 354 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~----------l~~~~~~~ 422 (517)
+.. ...++..|+++..+ .....++++++..+++++|++.|++. ++. +...+.++
T Consensus 238 ------------~~~--~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~ 302 (392)
T PLN03227 238 ------------FSA--SAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISP 302 (392)
T ss_pred ------------ccC--CCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCC
Confidence 111 11223344444332 11123567888899999999999752 222 12234566
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeee-------eECCEeEEEEEecCCCCcHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHA-------VLGGIYAIRFATGATLTEKR 495 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-------~~~g~~~lR~~~~~~~t~~~ 495 (517)
++.+.+.+... . ..........++.+++.++|....... ..-....+|++++ ...|++
T Consensus 303 i~~i~~~~~~~----------~----~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~-~~~t~e 367 (392)
T PLN03227 303 IIYLRLSDQEA----------T----RRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVAN-ASHTRE 367 (392)
T ss_pred EEEEEeCCHHH----------h----hhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEec-CCCCHH
Confidence 77777643210 0 000001234578888888897543210 1122467999985 566777
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010125 496 HVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 496 di~~l~~~l~~~~~~l~ 512 (517)
||+++++.|+++.+++.
T Consensus 368 ei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 368 DIDKLLTVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999987764
No 144
>PRK15029 arginine decarboxylase; Provisional
Probab=99.83 E-value=5.4e-18 Score=183.41 Aligned_cols=175 Identities=15% Similarity=0.163 Sum_probs=140.1
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
+..+..+++||.+.++ ++++|+|.+|..++.++.. +++.|+++..+|-|+..++.+.|+
T Consensus 209 eAq~~aA~~fgA~~t~--------FlvNGST~gn~a~i~a~~~-----------~gd~Vlv~RN~HKSv~~al~L~ga-- 267 (755)
T PRK15029 209 ESEKYAARVFGADRSW--------SVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLILTGA-- 267 (755)
T ss_pred HHHHHHHHHhCCCcEE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC--
Confidence 4458899999998775 8889999999876666543 677899999999999999999999
Q ss_pred CCEEEEecCCCCC---cccC-----HHHHHHHHHHhH--h--cCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 217 KNFRAIKTTKSSS---YGLS-----PDSLMAQINSDV--E--VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 217 ~~v~~vp~d~~~~---~~~d-----~~~Le~~i~~~~--~--~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
..++++....+. +.++ ++.++++|++.. + ++.+|.+|++|.+| ..|.+-++++|+++|+++|+.||
T Consensus 268 -~Pvyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~ll 345 (755)
T PRK15029 268 -KPVYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLH 345 (755)
T ss_pred -eEEEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEE
Confidence 888886543211 2345 999999997643 1 34577889999887 57999999999999999999999
Q ss_pred cccccccccccCccccc--ccc----CCCCCC-eeeeccccccCCCCcceEEEEeCc
Q 010125 285 VDAAYAGSACICPEFRH--FID----GVEGAD-SFSLNAHKWFFATLDCCCLWVKDP 334 (517)
Q Consensus 285 vDaA~g~~~~~~~~~~~--~~~----g~~~aD-si~~~~hK~l~~p~~~g~l~~~~~ 334 (517)
||+|||+.+.+.+.+.. .+. .-.++| .++-|.||+|.+--.++++.+++.
T Consensus 346 vDEAhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~ 402 (755)
T PRK15029 346 FDEAWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREG 402 (755)
T ss_pred EECccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCC
Confidence 99999999887776643 121 014688 888899999998888999998664
No 145
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=5.6e-18 Score=163.11 Aligned_cols=382 Identities=13% Similarity=0.105 Sum_probs=256.5
Q ss_pred CCHHHHHHHHHHhhcCCCC------CCCCCccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHH
Q 010125 71 ESMETILQDVQQHIVPGIT------HWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQ 144 (517)
Q Consensus 71 ~~~~~il~~~~~~~~~~~~------~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~ 144 (517)
.++..++..+.....++.. +.+.|.-|+.+.++......+.+.+.+.. ...|..+.+...-.+++++++-+
T Consensus 42 ~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk---~N~Yaps~G~~~AR~AVAeYl~~ 118 (447)
T KOG0259|consen 42 VTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGK---GNGYAPSVGILPARRAVAEYLNR 118 (447)
T ss_pred ccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCC---CCCcCCccccHHHHHHHHHHhhc
Confidence 4566677666654444431 12446777777766666666666665543 33677778888888888888666
Q ss_pred HcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEec
Q 010125 145 MLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKT 224 (517)
Q Consensus 145 l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~ 224 (517)
-+...-. ..+.++|+|.++|+-.++.+.-+ ++.-|+++.+.++-...-|...|+ +|+.+..
T Consensus 119 ~l~~kl~-----a~DV~ltsGC~qAIe~~i~~LA~-----------p~aNILlPrPGfp~Y~~~a~~~~l---EVR~ydl 179 (447)
T KOG0259|consen 119 DLPNKLT-----ADDVVLTSGCSQAIELAISSLAN-----------PGANILLPRPGFPLYDTRAIYSGL---EVRYYDL 179 (447)
T ss_pred CCCCccC-----cCceEEeccchHHHHHHHHHhcC-----------CCCceecCCCCCchHHHhhhhcCc---eeEeecc
Confidence 4443221 23789999999999888876533 666799999998888888999999 9999999
Q ss_pred CCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc---cChhHHHHHHHHhCCeEEcccccccccccCccccc
Q 010125 225 TKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH 301 (517)
Q Consensus 225 d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~ 301 (517)
-++.+|++|++.+|..++++|. ++++..++|+.|.+ +.|++|+++|+|+|+.++.|..|+-.++....+-.
T Consensus 180 LPe~~weIDL~~veal~DENT~------AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvp 253 (447)
T KOG0259|consen 180 LPEKDWEIDLDGVEALADENTV------AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVP 253 (447)
T ss_pred cCcccceechHHHHHhhccCee------EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccc
Confidence 8888999999999999999885 78888999999988 67999999999999999999999777664433332
Q ss_pred cccCCCCCCeeeec-cccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHH
Q 010125 302 FIDGVEGADSFSLN-AHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWF 379 (517)
Q Consensus 302 ~~~g~~~aDsi~~~-~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~ 379 (517)
.-.-...+-.+|+. ..|-.. ..+..|++.+-|+... |... ..+. +..++.+.+.... .+-.-++-.
T Consensus 254 mg~fssiVPVitlggisKrW~VPGWRlGWi~~hD~~gv---f~~~-~~~q-------~~~~~~~~~~~p~-TiiQ~AlP~ 321 (447)
T KOG0259|consen 254 MGKFSSIVPVITLGGISKRWIVPGWRLGWIALHDPRGV---FRDT-KVVQ-------GIKNFLDIIPGPA-TIIQGALPD 321 (447)
T ss_pred hhhccccCceEeecccccccccCCceeeeEEEeccccc---ccch-HHHH-------HHHHHHhccCCcc-HhHHHHhHH
Confidence 21112345566666 566554 4488999998876431 1110 0000 0000111110000 001112233
Q ss_pred HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHH
Q 010125 380 VIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRE 459 (517)
Q Consensus 380 ~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (517)
.|..--.+-|.+.+.-...+++...+.|+++|++.+...|+..++...-... ..+. +. +....
T Consensus 322 IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~--s~~~--------------~~-~dD~d 384 (447)
T KOG0259|consen 322 ILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNL--SLFP--------------DI-EDDVD 384 (447)
T ss_pred HHHhChHHHHHHHHHHHHhhHHHHHHHHhcCCCcccCcCCCcceEEEeccch--hhhc--------------cc-cccHH
Confidence 3444456778888888999999999999999999876678776654322111 0000 00 11123
Q ss_pred HHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 460 LLESIN-ASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 460 l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
++.+|. ++..++++++-+.-++|+|++++ ...+.++++.++|++..++-.
T Consensus 385 Fc~kL~~Eesv~~LPG~af~~~nw~Ri~i~---~~~~~leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 385 FCQKLAREESVICLPGQAFGLKNWLRIVIT---VEEEMLEEAFSRIKEFCDRHS 435 (447)
T ss_pred HHHHHhhhcceEEeccccccCCCeEEEEEc---cChHHHHHHHHHHHHHHHhhh
Confidence 444444 45667788888888999999984 466789999999999876543
No 146
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.83 E-value=5e-18 Score=175.25 Aligned_cols=326 Identities=13% Similarity=0.052 Sum_probs=206.6
Q ss_pred HHHHHHHHHhcccc-cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 107 AGFLGEMLSSGFNI-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 107 ~~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+..+.+.+...+.. ....|....+..++.+.+++|+.+.+|.+.+. ....++|+|+++++..++.+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~ii~t~G~~~~i~~~~~~~~~------ 115 (385)
T PRK09276 46 PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP----ETEVISLIGSKEGIAHIPLAFVN------ 115 (385)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC------
Confidence 44556666655532 23456555567889999999999888864321 01477789999988766654422
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++.++++..+..+++..|+ +++.+|++.+.++.+|++++++.+.+.+ .+|+++.++|+||.
T Consensus 116 -----~gd~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~l~~~~~~~~------~~v~l~~p~NPtG~ 181 (385)
T PRK09276 116 -----PGDVVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDAIPEDVAKKA------KLMFINYPNNPTGA 181 (385)
T ss_pred -----CCCEEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHHHHHhccccc------eEEEEeCCCCCCCC
Confidence 566788899999999999999999 9999999754457789999988876433 37788889999999
Q ss_pred ccC---hhHHHHHHHHhCCeEEcccccccccccCccccccc--cCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHh
Q 010125 266 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVS 339 (517)
Q Consensus 266 idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~ 339 (517)
+-+ +++|+++|++||+|+++|.+|+.+........... ........+..++.|.++ ....+|+++.. +... +
T Consensus 182 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~-~~l~-~ 259 (385)
T PRK09276 182 VADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN-ADLI-A 259 (385)
T ss_pred CCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC-HHHH-H
Confidence 866 68899999999999999999976543211111111 111122355677999996 44568888753 3322 2
Q ss_pred hhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 340 SLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 340 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
.+.....++.. + ...+...++...+ ....+++..++..++++++.+.|++. ++++.
T Consensus 260 ~~~~~~~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~- 317 (385)
T PRK09276 260 GLGKVKSNVDS-----------------G---VFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVE- 317 (385)
T ss_pred HHHHHHhhccC-----------------C---CCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-
Confidence 22111111100 0 0112222223333 24455666777788899999999887 77765
Q ss_pred CCCeeE-EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCc
Q 010125 418 PCHFAV-VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTE 493 (517)
Q Consensus 418 ~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~ 493 (517)
+|..++ +++++.+. ....++.++|. +.|+...++..+. +..++|++++. +
T Consensus 318 ~~~~~~~~~v~~~~~-----------------------~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~---~ 371 (385)
T PRK09276 318 PPKATFYVWAPVPKG-----------------------YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTV---P 371 (385)
T ss_pred CCCcceEEEEECCCC-----------------------CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCC---C
Confidence 444454 34444321 01245556654 4676555444332 24689999952 5
Q ss_pred HHHHHHHHHHHHH
Q 010125 494 KRHVVVAWTVVQQ 506 (517)
Q Consensus 494 ~~di~~l~~~l~~ 506 (517)
++++.+.++.|.+
T Consensus 372 ~~~l~~~l~~l~~ 384 (385)
T PRK09276 372 DERIEEAVERIKK 384 (385)
T ss_pred HHHHHHHHHHHhh
Confidence 6677777777653
No 147
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.82 E-value=6.6e-18 Score=174.97 Aligned_cols=327 Identities=13% Similarity=0.095 Sum_probs=205.2
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCC-cccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+..+.+.+...++ ....|....+..++.+.+++|+.+.+|++ -+. ....++|+|+++++..++.+..+.
T Consensus 44 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~~~i~it~G~~~al~~~~~~l~~~----- 113 (396)
T PRK09147 44 PAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP----ATQVLPVNGSREALFAFAQTVIDR----- 113 (396)
T ss_pred CHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc----cceEEECCChHHHHHHHHHHHcCC-----
Confidence 4456666655554 34567666677889999999999988865 220 015788999999887666554320
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+..++.|++..+++..+..+++.+|+ +++.||+++++++.+|+++|++.+.+++ .+++++.++||||.
T Consensus 114 ---~~~gd~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~~~------k~i~l~nP~NPTG~ 181 (396)
T PRK09147 114 ---DGPGPLVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWART------QLLFVCSPGNPTGA 181 (396)
T ss_pred ---CCCCCEEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHHHHHHHHhhcc------EEEEEcCCCCCcCc
Confidence 00156788899999999999999999 9999999865567899999998876533 36777899999998
Q ss_pred cc---ChhHHHHHHHHhCCeEEcccccccccccCcccc-cccc---CC--CCCC--eeeecccccc-CCCCcceEEEEeC
Q 010125 266 VD---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFR-HFID---GV--EGAD--SFSLNAHKWF-FATLDCCCLWVKD 333 (517)
Q Consensus 266 id---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~-~~~~---g~--~~aD--si~~~~hK~l-~~p~~~g~l~~~~ 333 (517)
+- .+++|+++|++||+|+++|.+|+.+.+...... ..+. .. ...| .+..++.|.+ .....+|+++..
T Consensus 182 ~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~~~- 260 (396)
T PRK09147 182 VLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVAGD- 260 (396)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeecCC-
Confidence 85 578888899999999999999977643211000 0010 01 1112 5667799965 555888988764
Q ss_pred chhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010125 334 PRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKR 412 (517)
Q Consensus 334 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~ 412 (517)
+... +.+.....+.. .....+...+++..+ ..+.+++..+...+.++.+.+.|++.
T Consensus 261 ~~l~-~~~~~~~~~~~--------------------~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-- 317 (396)
T PRK09147 261 AALL-KKFLLYRTYHG--------------------CAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAPV-- 317 (396)
T ss_pred HHHH-HHHHHHhhhcc--------------------cCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 3322 22211111110 001122223323333 23345666667777777888888763
Q ss_pred eEEecCCCeeE-EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--------CEeE
Q 010125 413 FEIVFPCHFAV-VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--------GIYA 482 (517)
Q Consensus 413 ~~l~~~~~~~~-v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--------g~~~ 482 (517)
+.+. .|+.+. +.+++. .. ...+.+++. +.|+...++..+. +..+
T Consensus 318 ~~~~-~p~~g~f~~~~~~-~~------------------------~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~ 371 (396)
T PRK09147 318 LDVQ-LPDAGFYLWAKVP-GD------------------------DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGR 371 (396)
T ss_pred cCCC-CCCeeEEEEEECC-CC------------------------HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCe
Confidence 4433 344444 444443 10 134555554 5676655544331 2468
Q ss_pred EEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 483 IRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 483 lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
+|++++. +++++++++++|.+..
T Consensus 372 iRi~~~~---~~~~l~~~l~rl~~~~ 394 (396)
T PRK09147 372 VRIALVA---PLAECVEAAERIVDFC 394 (396)
T ss_pred EEEEecC---CHHHHHHHHHHHHHHh
Confidence 9999964 4668888888887654
No 148
>PRK06855 aminotransferase; Validated
Probab=99.82 E-value=1.1e-17 Score=174.91 Aligned_cols=360 Identities=9% Similarity=0.061 Sum_probs=216.5
Q ss_pred ChHHHHHHHHHhcc-cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 105 SIAGFLGEMLSSGF-NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 105 ~~~~~~~~~l~~~~-n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
.+|..+.+.+...+ +.....|....+..++.+.+++|+.+..|++-. ...+++|+|+++|+..++. ..+
T Consensus 48 ~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~-----~~~I~it~G~~~al~~~~~-l~~---- 117 (433)
T PRK06855 48 KIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQIT-----PDDIIFFNGLGDAIAKIYG-LLR---- 117 (433)
T ss_pred CCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCC-----HhHEEEcCcHHHHHHHHHH-hcC----
Confidence 44555565555544 233456777778899999999999998776432 1378999999998866542 211
Q ss_pred HhcccCCCCeEEEeCCCCchHHHHHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCc
Q 010125 184 KIGRENISKLIVYGSDQTHCALQKAA-QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA 262 (517)
Q Consensus 184 ~~g~~~~~~~~v~~s~~~H~s~~kaa-~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~ 262 (517)
+++.|++.+++|..+..+. ...|+ +++.+|+++++++.+|+++|+++++... .+.+++.+.++||
T Consensus 118 -------~Gd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NP 183 (433)
T PRK06855 118 -------REARVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNP 183 (433)
T ss_pred -------CCCeEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCC
Confidence 5667888889988765442 34577 8899998765567899999999986321 1236677789999
Q ss_pred cccccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCC-CCeeeeccccccC-CCCcceEEEEeCc---
Q 010125 263 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG-ADSFSLNAHKWFF-ATLDCCCLWVKDP--- 334 (517)
Q Consensus 263 ~G~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~-aDsi~~~~hK~l~-~p~~~g~l~~~~~--- 334 (517)
||.+-+ +++|+++|++||+|+++|.+|+...+..........-... --.+..++.|.++ ..+.+|++++.+.
T Consensus 184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~ 263 (433)
T PRK06855 184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKD 263 (433)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchh
Confidence 999855 6778888999999999999997765422111111111111 1255677999996 6688999987421
Q ss_pred hhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--c--HHHHHHHHHHHHHHHHHHHHHHhcC
Q 010125 335 RALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--G--VANLRHFLRSHVNMAKLFERLVSGD 410 (517)
Q Consensus 335 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g--~~g~~~~i~~~~~~a~~l~~~l~~~ 410 (517)
..+...+.....+... .. + ...+...++...+ + .+.+++..+...++++.+.+.|++.
T Consensus 264 ~~~~~~~~~~~~~~~~--------------~~-~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 325 (433)
T PRK06855 264 EVFKKYINSILNAKMI--------------EV-C---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDV 325 (433)
T ss_pred hHHHHHHHHHHHhhcc--------------cc-C---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 1111111100000000 00 0 1223333444444 2 2346666777788888899999888
Q ss_pred CCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHH-HH-------HHHHHHH-HHHhcCcEEEeeeeEC-CE
Q 010125 411 KRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQI-NE-------FNRELLE-SINASGKAYMTHAVLG-GI 480 (517)
Q Consensus 411 ~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~l~~-~l~~~g~~~~~~~~~~-g~ 480 (517)
+++.+ .+|+.++++|--.+........ + .. ..+.+.... .. ...++.. .+.+.|+.++++..+. ..
T Consensus 326 ~~~~~-~~p~gg~~~w~~l~~~~~~~~~-~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~ 401 (433)
T PRK06855 326 PGLKV-NRTNGAFYMTVVFEDGVLNNKQ-S-LP-IENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTEL 401 (433)
T ss_pred CCeec-cCCCeeEEEeeccccccccccc-c-CC-cchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCC
Confidence 78765 3676666655433321000000 0 00 000000000 00 0223343 3456787776666552 23
Q ss_pred eEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 481 YAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 481 ~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
..+|+|+++ .+.++|++.++.|.++.++..
T Consensus 402 ~~~Rls~~~--~~~~~i~~~~~~l~~~~~~~~ 431 (433)
T PRK06855 402 NGFRVTLLE--RDEEKFEWIYQTLAEKIEEYL 431 (433)
T ss_pred CceEEEECC--CcHHHHHHHHHHHHHHHHHHh
Confidence 469999964 367899999999998887654
No 149
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=8e-18 Score=171.66 Aligned_cols=310 Identities=13% Similarity=0.040 Sum_probs=199.4
Q ss_pred HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 108 GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 108 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
..+.+.+...+......|. .+...+ +++.+++.++.+++ .+++|+|+++++..++.+..+
T Consensus 40 ~~~~~a~~~~~~~~~~~y~-~~~~~~----lr~aia~~~~~~~~-------~I~it~G~~~al~~~~~~l~~-------- 99 (353)
T PRK05387 40 PKVLEAIRAALGDDLRLYP-DPNADA----LRQAIAAYYGLDPE-------QVFVGNGSDEVLAHAFLAFFN-------- 99 (353)
T ss_pred HHHHHHHHHHhhhhhhcCC-CCcHHH----HHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC--------
Confidence 3455555544433233443 233344 44556666677665 799999999998877766533
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD 267 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id 267 (517)
+++.|++++++|..+...++..|+ +++.+|.++ ++.+|+++|++ .+ .+|+++.++|+||.+-
T Consensus 100 ---~gd~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~----~~------~~v~~~~P~NPtG~~~ 161 (353)
T PRK05387 100 ---HDRPLLFPDITYSFYPVYAGLYGI---PYEEIPLDD--DFSIDVEDYLR----PN------GGIIFPNPNAPTGIAL 161 (353)
T ss_pred ---CCCEEEEeCCCHHHHHHHHHHcCC---EEEEeecCC--CCCCCHHHHHh----cC------CEEEEeCCCCCCCCCC
Confidence 566788888999888888999999 999999864 57899999863 11 2678889999999999
Q ss_pred ChhHHHHHHHHh-CCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCc
Q 010125 268 PLKPLCDVAKQF-GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNP 345 (517)
Q Consensus 268 pl~eI~~i~~~~-gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~ 345 (517)
|.+++.++++++ |+++++|.+|..+. ........... .-..++.+++|.++ ....+|+++.. +... +.+....
T Consensus 162 ~~~~~~~l~~~~~~~~livDe~y~~~~--~~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~~-~~l~~~~ 236 (353)
T PRK05387 162 PLAEIERILAANPDSVVVIDEAYVDFG--GESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIGH-PELI-EALNRVK 236 (353)
T ss_pred CHHHHHHHHHhCCCcEEEEeCcccccC--CcchHHHHhhC-CCEEEEEehhHhhcchhhhceeeecC-HHHH-HHHHHhh
Confidence 999999999886 99999999995432 11111111111 22477788999987 44678888763 3322 2221111
Q ss_pred cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEE
Q 010125 346 EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVV 424 (517)
Q Consensus 346 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v 424 (517)
.... .+ ....+..+++...+. .+.+++..++..++++++.+.|++. ++++. ++..+++
T Consensus 237 ~~~~-------------~~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~ 295 (353)
T PRK05387 237 NSFN-------------SY------PLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFV 295 (353)
T ss_pred ccCC-------------CC------CcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEE
Confidence 0000 00 012233333434442 3456777788888999999999887 78764 4555555
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.++..+. ...++.+.|.++|+............++|++++ +.+++++++++|
T Consensus 296 ~~~~~~~------------------------~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~----~~~~~~~~~~~L 347 (353)
T PRK05387 296 FARHPSH------------------------DAAELAAKLRERGIIVRHFNKPRIDQFLRITIG----TDEEMEALVDAL 347 (353)
T ss_pred EEECCCC------------------------CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHH
Confidence 5544321 124566777777865432211123568999985 457999999999
Q ss_pred HHHHH
Q 010125 505 QQHLE 509 (517)
Q Consensus 505 ~~~~~ 509 (517)
+++..
T Consensus 348 ~~~~~ 352 (353)
T PRK05387 348 KEILA 352 (353)
T ss_pred HHHhh
Confidence 87643
No 150
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.82 E-value=2.7e-18 Score=176.40 Aligned_cols=318 Identities=14% Similarity=0.092 Sum_probs=198.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
.+|...++|+++. +++|.+ .+++++|||+|+..++.+..- .+++.|+++..+|.+..
T Consensus 31 ~g~~~~~le~~la----~~~g~~---------~~v~~~sgt~al~lal~al~~----------~~Gd~Viv~~~~~~~~~ 87 (379)
T PRK11658 31 TGPKNQALEQAFC----QLTGNQ---------HAIAVSSATAGMHITLMALGI----------GPGDEVITPSLTWVSTL 87 (379)
T ss_pred CCHhHHHHHHHHH----HHhCCC---------eEEEECCHHHHHHHHHHHcCC----------CCCCEEEECCCcHHHHH
Confidence 4677777776654 555554 368899999999887765411 15677999999999999
Q ss_pred HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcc
Q 010125 207 KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 286 (517)
Q Consensus 207 kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvD 286 (517)
.++...|+ +++.++++++ ++.+|+++|+++++++++ +|+. ++++|...|+++|+++|++||+++++|
T Consensus 88 ~~~~~~G~---~~v~vd~~~~-~~~~d~~~l~~~i~~~tk------av~~---~~~~G~~~d~~~i~~~a~~~gi~vi~D 154 (379)
T PRK11658 88 NMIVLLGA---TPVMVDVDRD-TLMVTPEAIEAAITPRTK------AIIP---VHYAGAPADLDAIRAIGERYGIPVIED 154 (379)
T ss_pred HHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhcccCCe------EEEE---eCCCCCcCCHHHHHHHHHHcCCeEEEE
Confidence 99999999 9999999863 578999999999976543 4553 345899999999999999999999999
Q ss_pred cccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhh--cCCccccCCccc-cccccccCCC
Q 010125 287 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSL--STNPEYLKNKAT-ESMQVVDYKD 363 (517)
Q Consensus 287 aA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~--~~~~~yl~~~~~-~~~~~~~~~~ 363 (517)
+||+.+....... + +-.+.+.++++.+|++.++ ..|++++.+++...+.. .....+...... .......+.
T Consensus 155 ~a~a~g~~~~~~~---~-g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~- 228 (379)
T PRK11658 155 AAHAVGTYYKGRH---I-GARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAE- 228 (379)
T ss_pred CCCccCCeECCee---c-CCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcce-
Confidence 9997554332111 1 1124578899999998664 35556655555432221 111111100000 000000000
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-----eeEEEEEecCCCcchhhh
Q 010125 364 WQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCH-----FAVVCFRVSPSPVLMDKL 438 (517)
Q Consensus 364 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~-----~~~v~f~~~~~~~~~~~~ 438 (517)
....+..++...+-+++.....++++++.++..++++++.+.|++++...+..+.. ..++++++.+...
T Consensus 229 -~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 302 (379)
T PRK11658 229 -VLTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEERC----- 302 (379)
T ss_pred -eeccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCccc-----
Confidence 01122233344556666666678999999999999999999999886432322211 1344555532100
Q ss_pred hhhhhccccchHHHHHHHHHHHHHHHHhcCcEEE---eeee----EC--------------CEeEEEEEecCCCCcHHHH
Q 010125 439 KTKYVNCLLSEEEQINEFNRELLESINASGKAYM---THAV----LG--------------GIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~~--------------g~~~lR~~~~~~~t~~~di 497 (517)
+....++.+.|.++|+..- .+.. +. ....+.+- +++..+++|+
T Consensus 303 ---------------~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP-~~~~l~~~~~ 366 (379)
T PRK11658 303 ---------------GISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLP-LFPDMTDADV 366 (379)
T ss_pred ---------------cCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEcc-CCCCCCHHHH
Confidence 0113456666666675211 0000 00 01234433 3678899999
Q ss_pred HHHHHHHHHHH
Q 010125 498 VVAWTVVQQHL 508 (517)
Q Consensus 498 ~~l~~~l~~~~ 508 (517)
+++++.|+++.
T Consensus 367 ~~i~~~i~~~~ 377 (379)
T PRK11658 367 DRVITALQQIA 377 (379)
T ss_pred HHHHHHHHHHH
Confidence 99999998864
No 151
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.82 E-value=1.4e-17 Score=173.11 Aligned_cols=298 Identities=11% Similarity=0.093 Sum_probs=190.4
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG 213 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G 213 (517)
...++.+.+++++|.+ ..+++++|++||..++.+.... .++.+|+++...|.|+..+++..|
T Consensus 91 ~~~~le~~la~~~g~~---------~~~~~~SG~~An~~ai~~l~~~---------~~g~~I~~~~~~H~s~~~~~~~~g 152 (406)
T PRK13393 91 YHVLLEAELADLHGKE---------AALLFTSGYVSNWAALSTLGSR---------LPGCVILSDELNHASMIEGIRHSR 152 (406)
T ss_pred HHHHHHHHHHHHhCCC---------cEEEeCCcHHHHHHHHHHhhcC---------CCCCEEEEccchhHHHHHHHHHcC
Confidence 4455667777888754 3566777788998888743221 034578888889999999998888
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccc
Q 010125 214 IDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 293 (517)
Q Consensus 214 ~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~ 293 (517)
. +++.+|. .|++.+++.++... ...+.+|+++..++++|.+.|+++|.++|++||+++++|+||+.+.
T Consensus 153 ~---~~~~~~~-------~d~~~l~~~l~~~~--~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~ 220 (406)
T PRK13393 153 A---EKRIFRH-------NDPADLERKLSDLD--PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGL 220 (406)
T ss_pred C---eEEEeCC-------CCHHHHHHHHHhcc--CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCccccc
Confidence 7 7777764 27788888876431 1134578888899999999999999999999999999999997444
Q ss_pred ccCccccccc--cC-CCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhc-CCccccCCccccccccccCCCccccCC
Q 010125 294 CICPEFRHFI--DG-VEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLS-TNPEYLKNKATESMQVVDYKDWQITLS 369 (517)
Q Consensus 294 ~~~~~~~~~~--~g-~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~s 369 (517)
+ .+...... .+ .+..|.+..++.|.++.+ .|++.. ++... +.+. ...+|.. ..+
T Consensus 221 ~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~--GG~~~~-~~~~~-~~l~~~~~~~~~-----------------t~~ 278 (406)
T PRK13393 221 Y-GPRGGGIAEREGLADRLTIIEGTLAKAFGVM--GGYITG-SAALC-DFIRSFASGFIF-----------------TTS 278 (406)
T ss_pred c-CCCCCchhhhcCCCCCCeEEEEeCchhhccc--CceeeC-CHHHH-HHHHHhCcCcee-----------------cCc
Confidence 2 12111111 12 234677777899999864 255543 33322 2221 1111211 111
Q ss_pred CC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccc
Q 010125 370 RR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLS 448 (517)
Q Consensus 370 r~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 448 (517)
.. .....+.++++.+...+ ...++..++++++.+.|++. +++++ ++..+++.+.+. .
T Consensus 279 ~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~i~~v~~~-~----------------- 336 (406)
T PRK13393 279 LPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKA-GIPHL-PNPSHIVPVMVG-D----------------- 336 (406)
T ss_pred cCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCeEEEEeC-C-----------------
Confidence 11 12234445555442222 23356678899999999876 67665 455666666442 1
Q ss_pred hHHHHHHHHHHHHHHHHhc-CcEEEee---eeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 449 EEEQINEFNRELLESINAS-GKAYMTH---AVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 449 ~~~~~~~~~~~l~~~l~~~-g~~~~~~---~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.....++.++|.++ |++.... +...|..++|+++ +...+++|+++++++|+++.+++
T Consensus 337 -----~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~-~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 337 -----PVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITP-SPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred -----HHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 12245677777764 7543221 2223557899998 56778889999999999887653
No 152
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.82 E-value=1.9e-17 Score=171.35 Aligned_cols=332 Identities=12% Similarity=0.027 Sum_probs=208.3
Q ss_pred hHHHHHHHHHhcccc---cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHH
Q 010125 106 IAGFLGEMLSSGFNI---VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVL 182 (517)
Q Consensus 106 ~~~~~~~~l~~~~n~---~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~ 182 (517)
++..+.+.+...++. +...|....+...+.+.+.+|+.+..+.+-. ....++|+|+++++..++.+...
T Consensus 47 ~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~--- 118 (394)
T PRK06836 47 PPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLT-----ADHIVMTCGAAGALNVALKAILN--- 118 (394)
T ss_pred CCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCC-----cCcEEEeCChHHHHHHHHHHhcC---
Confidence 455666666655532 2345666677888889999999887665321 12689999999988766655421
Q ss_pred HHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCc
Q 010125 183 NKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA 262 (517)
Q Consensus 183 ~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~ 262 (517)
+++.|+++++++..+..+++..|+ +++.+|++++ ++.+|+++|+++++++++ +|+++.++|+
T Consensus 119 --------~gd~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~~~~~~~------~v~~~~p~NP 180 (394)
T PRK06836 119 --------PGDEVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTD-TFQPDLDALEAAITPKTK------AVIINSPNNP 180 (394)
T ss_pred --------CCCEEEEcCCCCccHHHHHHHcCC---EEEEEecCCc-cCcCCHHHHHhhcCcCce------EEEEeCCCCC
Confidence 556788888999999999999999 9999999753 478999999999966443 6777889999
Q ss_pred cccccC---hhHHHHHHHH------hCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEe
Q 010125 263 ITAVDP---LKPLCDVAKQ------FGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVK 332 (517)
Q Consensus 263 ~G~idp---l~eI~~i~~~------~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~ 332 (517)
+|.+.| +++|+++|++ ||+|+++|.+|..+.............. .-..+..+++|.++ ....+|+++..
T Consensus 181 tG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~pGlRiG~~~~~ 259 (394)
T PRK06836 181 TGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYY-DNSIVVYSFSKSLSLPGERIGYIAVN 259 (394)
T ss_pred CCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHcc-CcEEEEecchhhccCcceeeEEEecC
Confidence 999866 6777778898 8999999999976543211111111111 22466778999997 55778998875
Q ss_pred CchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010125 333 DPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKR 412 (517)
Q Consensus 333 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~ 412 (517)
+.......+.......... .+......+...+..+.+.. +. ..++..+.++.+.+.|++. +
T Consensus 260 ~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~q~~~~~~l~~-~~--~~~~~~~~r~~l~~~L~~~-g 320 (394)
T PRK06836 260 PEMEDADDLVAALVFANRI---------------LGFVNAPALMQRVVAKCLDA-TV--DVSIYKRNRDLLYDGLTEL-G 320 (394)
T ss_pred HHHhhhHHHHHHHHHHhhc---------------cccccCCHHHHHHHHHHhCC-hH--HHHHHHHHHHHHHHHHHhC-C
Confidence 4321000000000000000 00000112222222232322 11 2344556778888888877 6
Q ss_pred eEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCC
Q 010125 413 FEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLT 492 (517)
Q Consensus 413 ~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 492 (517)
+++. +|..+++.|.-.+.. ...++.+.+.+.|+.+.++..+....++|++++ .
T Consensus 321 ~~~~-~~~gg~~~~~~~~~~-----------------------~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~---~ 373 (394)
T PRK06836 321 FECV-KPQGAFYLFPKSPEE-----------------------DDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC---V 373 (394)
T ss_pred CEee-cCCceEEEEEeCCCC-----------------------CHHHHHHHHHhCCEEEECchhcCCCCeEEEEec---C
Confidence 7765 454454444322220 023455666677876665554444568999995 2
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 010125 493 EKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 493 ~~~di~~l~~~l~~~~~~ 510 (517)
++++++..++.|+++.++
T Consensus 374 ~~~~~~~~i~~l~~~l~~ 391 (394)
T PRK06836 374 DTETIERSLPAFEKLAKE 391 (394)
T ss_pred CHHHHHHHHHHHHHHHHH
Confidence 677999999888877653
No 153
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.82 E-value=8.5e-18 Score=171.71 Aligned_cols=290 Identities=11% Similarity=0.067 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG 213 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G 213 (517)
+..++.+.+++++|.+. .+++++|+++++.++.+... +++.|++++..|.+...+++..|
T Consensus 62 ~~~~l~~~la~~~~~~~---------~i~~~~G~~~~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~g 121 (360)
T TIGR00858 62 LHEELEEELAEWKGTEA---------ALLFSSGYLANVGVISALVG-----------KGDLILSDALNHASLIDGCRLSG 121 (360)
T ss_pred HHHHHHHHHHHHhCCCC---------EEEECchHHHHHHHHHHhCC-----------CCCEEEEEccccHHHHHHHHhcC
Confidence 33445555666666432 35555668887765544321 55678888899999999999999
Q ss_pred CCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccc
Q 010125 214 IDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 293 (517)
Q Consensus 214 ~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~ 293 (517)
+ +++.++. +|+++|++.+++.. +..+.+|+.....+++|.+.|+++|.++|++||+++++|++|+.+.
T Consensus 122 ~---~~~~~~~-------~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~ 189 (360)
T TIGR00858 122 A---RVRRYRH-------NDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGV 189 (360)
T ss_pred C---ceEEecC-------CCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccC
Confidence 8 8887763 58899999987532 0123467777778899999999999999999999999999997543
Q ss_pred ccCcccccc--ccCC--CCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCccccC
Q 010125 294 CICPEFRHF--IDGV--EGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQITL 368 (517)
Q Consensus 294 ~~~~~~~~~--~~g~--~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~ 368 (517)
+... .... ..++ ...|++..++||+++.+ | |+++.+ ++.. +.+.. ...+. ...
T Consensus 190 ~~~~-~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-g-G~~~~~-~~~~-~~~~~~~~~~~-----------------~~~ 247 (360)
T TIGR00858 190 LGED-GRGTLEHFGLKPEPVDIQVGTLSKALGSY-G-AYVAGS-QALI-DYLINRARTLI-----------------FST 247 (360)
T ss_pred cCCC-CCchHHhcCCCccCCcEEEEechhhhhcc-C-cEEEcC-HHHH-HHHHHhCccce-----------------ecC
Confidence 3211 0111 1122 25688888999999763 3 666543 3322 22211 11111 011
Q ss_pred CCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhcccc
Q 010125 369 SRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLL 447 (517)
Q Consensus 369 sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 447 (517)
+.. ....++..+++.+. ...++.++..++++++.+.|++. ++++. ++..+++.+.+...
T Consensus 248 ~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~~---------------- 307 (360)
T TIGR00858 248 ALPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGDN---------------- 307 (360)
T ss_pred CCCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCCH----------------
Confidence 111 11123334444332 23567788899999999999886 67765 45566776665321
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeee---ECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 448 SEEEQINEFNRELLESINASGKAYMTHAV---LGGIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 448 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
....++.++|.++|+....... ..+..++|+++. ..++++|+++++++|+
T Consensus 308 -------~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~-~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 308 -------ASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLS-AAHTPGDIDRLAEALK 360 (360)
T ss_pred -------HHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEc-CCCCHHHHHHHHHhhC
Confidence 1235677778778865433211 134568999995 4567889999998763
No 154
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.82 E-value=7.1e-18 Score=173.72 Aligned_cols=335 Identities=13% Similarity=0.104 Sum_probs=199.7
Q ss_pred HHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCC
Q 010125 111 GEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI 190 (517)
Q Consensus 111 ~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~ 190 (517)
.+.+...+... .+..++...++|+++. +++|.+ ..++++|||+|+..++.+..-.
T Consensus 13 ~~~v~~~~~~~--~~~~g~~~~~le~~la----~~~g~~---------~~v~~~sgt~al~~~l~al~~~---------- 67 (380)
T TIGR03588 13 IDAVVEVLKSD--FLTQGPTVPAFEEALA----EYVGAK---------YAVAFNSATSALHIACLALGVG---------- 67 (380)
T ss_pred HHHHHHHHhcC--CccCChhHHHHHHHHH----HHHCCC---------eEEEEcCHHHHHHHHHHHcCCC----------
Confidence 34444444332 2334566667776655 455554 3466778899988777654111
Q ss_pred CCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChh
Q 010125 191 SKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLK 270 (517)
Q Consensus 191 ~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~ 270 (517)
+++.|+++..+|.+...++...|+ +++.++++++ ++.+|+++|++++++.. ...+.+|+.++ .+|...|++
T Consensus 68 ~Gd~Viv~~~~~~~~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~--~~~t~~v~~~~---~~G~~~~~~ 138 (380)
T TIGR03588 68 PGDRVWTTPITFVATANCALYCGA---KVDFVDIDPD-TGNIDEDALEKKLAAAK--GKLPKAIVPVD---FAGKSVDMQ 138 (380)
T ss_pred CCCEEEeCCcchHHHHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHhhccc--CCCceEEEEeC---CCCccCCHH
Confidence 566799999999999999999999 9999999753 57899999999997321 01123555443 579899999
Q ss_pred HHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccc--cccCCCCcceEEEEeCchhHHhhhcCC-ccc
Q 010125 271 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAH--KWFFATLDCCCLWVKDPRALVSSLSTN-PEY 347 (517)
Q Consensus 271 eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~~~~~~~~~~~~~~-~~y 347 (517)
+|+++|++||+++++|+||+.+... +. +. +......|..++++| |++..+ ..|++++.++....+.-... ...
T Consensus 139 ~i~~l~~~~~~~lI~D~a~a~g~~~-~~-~~-~g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~ 214 (380)
T TIGR03588 139 AIAALAKKHGLKIIEDASHALGAEY-GG-KP-VGNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGI 214 (380)
T ss_pred HHHHHHHHcCCEEEEECCCcccCcc-CC-Ee-CCCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCC
Confidence 9999999999999999999876542 11 11 111124599999988 999776 56667776665432211000 000
Q ss_pred cCCccccccccccCCCcccc---CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC----
Q 010125 348 LKNKATESMQVVDYKDWQIT---LSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCH---- 420 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~---~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~---- 420 (517)
...... ...+....+..+ .+..++.-.+-+++.....+.+.+++++..++++++.+.|+.+|++++..++.
T Consensus 215 ~~~~~~--~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 292 (380)
T TIGR03588 215 TKDPLL--FEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKS 292 (380)
T ss_pred CCCccc--ccccccCcceeeeeccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEe
Confidence 000000 000000000101 11112222222232222345688899999999999999999998776543321
Q ss_pred -eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEe---eee----E----C----------
Q 010125 421 -FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMT---HAV----L----G---------- 478 (517)
Q Consensus 421 -~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~----~----~---------- 478 (517)
...+.+.+.... .....++.+.|.++|+.... +.. + .
T Consensus 293 ~~~~~~i~~~~~~---------------------~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~ 351 (380)
T TIGR03588 293 AWHLYPILLDQEF---------------------GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENF 351 (380)
T ss_pred EEEEEEEEECCcC---------------------CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHH
Confidence 112233332210 01135666667777753210 100 0 0
Q ss_pred CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 479 GIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 479 g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
....+++.+ ++..+++|++++++.|+++
T Consensus 352 ~~~~l~lP~-~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 352 YLAEISLPL-HPALTLEQQQRVVETLRKV 379 (380)
T ss_pred HhceEEcCC-CCCCCHHHHHHHHHHHHHh
Confidence 014677765 6788999999999999875
No 155
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.82 E-value=2.2e-17 Score=171.44 Aligned_cols=340 Identities=13% Similarity=0.110 Sum_probs=211.0
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCC-ceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+..+..+.....+.....|....+...+.+.+++|+.+..|++... . ..++|+|+++|+..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~------ 117 (403)
T PRK08636 49 QHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDP-----ETEVVATMGSKEGYVHLVQAITN------ 117 (403)
T ss_pred HHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CCeEEECCChHHHHHHHHHHhCC------
Confidence 3344443333322234567666788899999999999988865331 2 489999999988776665432
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhc-CCcceEEEeeccCCccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEV-GLIPLFLCATIGTTAIT 264 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~-g~~p~~vv~t~gtt~~G 264 (517)
+++.|++.+++|..+..+++..|+ +++.||++.++++.+|+++|.+.+++..++ ..++.+++.+.++||||
T Consensus 118 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG 189 (403)
T PRK08636 118 -----PGDVAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTT 189 (403)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 667899999999999999999999 999999864445789998775555443322 12356888888999999
Q ss_pred cccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCC-CC--eeeeccccccC-CCCcceEEEEeCchhH
Q 010125 265 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG-AD--SFSLNAHKWFF-ATLDCCCLWVKDPRAL 337 (517)
Q Consensus 265 ~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~-aD--si~~~~hK~l~-~p~~~g~l~~~~~~~~ 337 (517)
.+-+ +++|+++|++||+|+++|.+|+........... +..+.. .| ..+.++.|.++ ....+|+++. ++...
T Consensus 190 ~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~-~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~li 267 (403)
T PRK08636 190 ATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPS-ILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKLV 267 (403)
T ss_pred ccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCC-hhcCCCccccEEEEEecccccCCccceeeeeeC-CHHHH
Confidence 9855 688888999999999999999765432111111 111212 12 33568999995 6688999765 33322
Q ss_pred HhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 338 VSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 338 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
..+.....+... ..+........ .+++. ..+.++++.+...++.+.+.+.|++. ++.+..
T Consensus 268 -~~~~~~~~~~~~----------------~~~~~~q~~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~ 327 (403)
T PRK08636 268 -GALKKIKSWLDY----------------GMFTPIQVAAT-IALDG-DQSCVEEIRETYRKRRDVLIESFANA-GWELQK 327 (403)
T ss_pred -HHHHHHHHHhcc----------------cCChHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 222211111100 00000011111 12221 24456666777778888899999886 676543
Q ss_pred CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcH
Q 010125 418 PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEK 494 (517)
Q Consensus 418 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~ 494 (517)
+.....++.++.+.. . .....++.+.+. +.|+...++..+. +..++|+++. .++
T Consensus 328 p~~g~~~~~~l~~~~----------------~----~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~---~~~ 384 (403)
T PRK08636 328 PRASMFVWAKIPEPA----------------R----HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI---ENE 384 (403)
T ss_pred CCcceEEEEECCCcc----------------C----CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec---CCH
Confidence 333334444543210 0 000234554433 5676655554443 2479999995 367
Q ss_pred HHHHHHHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQQHLEA 510 (517)
Q Consensus 495 ~di~~l~~~l~~~~~~ 510 (517)
+++++.++.|+++.+.
T Consensus 385 ~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 385 NRIRQAARNIKKFLKE 400 (403)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 7899999888877654
No 156
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.81 E-value=1.5e-17 Score=171.97 Aligned_cols=328 Identities=9% Similarity=0.027 Sum_probs=208.2
Q ss_pred HHHHHHHHHhccc-ccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCC-ceEEcCCchHHHHHHHHHHHHHHHHH
Q 010125 107 AGFLGEMLSSGFN-IVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNG-GGVIQGTTCEAILCTLTAARDRVLNK 184 (517)
Q Consensus 107 ~~~~~~~l~~~~n-~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~-~g~~t~ggt~a~~~al~~ar~~~~~~ 184 (517)
+..+.+.+...+. .....|...++..++.+++++|+.+..|.+-+ .. .+++|+|+++++..++.+..+
T Consensus 45 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-----~~~~I~it~Gs~~al~~~~~~l~~----- 114 (388)
T PRK07366 45 PAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVD-----PETEVLPLIGSQEGTAHLPLAVLN----- 114 (388)
T ss_pred CHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCC-----CcCeEEECCCcHHHHHHHHHHhCC-----
Confidence 3445555554443 23345766677889999999999988886432 12 478899999988766655432
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 185 IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
+++.|++.++++..+...++..|+ +++.||++.++.+.+|++++++.+...+ .+|+++.++||||
T Consensus 115 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------k~i~l~~p~NPTG 179 (388)
T PRK07366 115 ------PGDFALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLAQA------RLMVLSYPHNPTT 179 (388)
T ss_pred ------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhcccc------eEEEEeCCCCCCC
Confidence 566788888999999999999999 9999999865567889999988775432 3677778999999
Q ss_pred cccC---hhHHHHHHHHhCCeEEcccccccccccCcc-ccccccCCC-CCC--eeeeccccccC-CCCcceEEEEeCchh
Q 010125 265 AVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPE-FRHFIDGVE-GAD--SFSLNAHKWFF-ATLDCCCLWVKDPRA 336 (517)
Q Consensus 265 ~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~-~~~~~~g~~-~aD--si~~~~hK~l~-~p~~~g~l~~~~~~~ 336 (517)
.+-+ +++|+++|++||+|+++|.+|+-+...... .... ..+. .-+ .++.++.|.++ ....+|+++. +++.
T Consensus 180 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~l 257 (388)
T PRK07366 180 AIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSI-LQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQL 257 (388)
T ss_pred ccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCCh-hhCCCCcccEEEEeecccccCCcchhheehcC-CHHH
Confidence 9854 677888999999999999999766532111 1111 1111 112 45568999996 5588888875 3333
Q ss_pred HHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 337 LVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 337 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
. +.+.....+.. +.. .......++..+ ..+.+++..+...+.++++.+.|++. ++.
T Consensus 258 i-~~l~~~~~~~~----------------~~~----~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~ 315 (388)
T PRK07366 258 I-QALRQVKAVVD----------------FNQ----YRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWP 315 (388)
T ss_pred H-HHHHHHHhhcc----------------cCC----CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCc
Confidence 2 22211111000 000 011111222222 24556777788888888999999887 665
Q ss_pred EecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeEC--CEeEEEEEecCCC
Q 010125 415 IVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI-NASGKAYMTHAVLG--GIYAIRFATGATL 491 (517)
Q Consensus 415 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~--g~~~lR~~~~~~~ 491 (517)
...+.....+.+.+.+. . +....++.+.+ .+.|+...++..+. +..++|++++.
T Consensus 316 ~~~p~~g~f~~~~~~~~-~--------------------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~-- 372 (388)
T PRK07366 316 VPLPEATMYVWAKLPEP-W--------------------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVH-- 372 (388)
T ss_pred ccCCCeeEEEEEECCcc-c--------------------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecC--
Confidence 44333334444444321 0 00023455555 45677665554443 24799999853
Q ss_pred CcHHHHHHHHHHHHHH
Q 010125 492 TEKRHVVVAWTVVQQH 507 (517)
Q Consensus 492 t~~~di~~l~~~l~~~ 507 (517)
+.+++++.++.|.+.
T Consensus 373 -~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 373 -DPDILEEAVERIAAF 387 (388)
T ss_pred -CHHHHHHHHHHHHHh
Confidence 477899888888754
No 157
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.81 E-value=1.1e-17 Score=171.15 Aligned_cols=283 Identities=14% Similarity=0.124 Sum_probs=178.5
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEE-cCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
++++.+++++|++++ ..++ ++|+++++..++.+..+ +++.|++++++|..+...++..|+
T Consensus 73 ~lr~~ia~~~~~~~~-------~i~~~~~Ga~~~i~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~~~g~- 133 (361)
T PRK00950 73 ELREALSKYTGVPVE-------NIIVGGDGMDEVIDTLMRTFID-----------PGDEVIIPTPTFSYYEISAKAHGA- 133 (361)
T ss_pred HHHHHHHHHhCCCHH-------HEEEeCCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC-
Confidence 344555566677654 5677 55666665544443311 456688888888888888899999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccccc
Q 010125 216 VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 295 (517)
Q Consensus 216 ~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~ 295 (517)
+++.+|.+. ++.+|+++|++++...+ .+|+++.+++++|.+-|.+++.++|+++|+++++|++|+.+.
T Consensus 134 --~~~~~~~~~--~~~~~~~~l~~~~~~~~------~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~~~~-- 201 (361)
T PRK00950 134 --KPVYAKREE--DFSLDVDSVLNAITEKT------KVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYVEFA-- 201 (361)
T ss_pred --EEEEeecCC--CCCcCHHHHHHHhccCC------CEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchhhhC--
Confidence 999999653 57899999999886433 267778999999999999999999999999999999997653
Q ss_pred CccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCc
Q 010125 296 CPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRS 374 (517)
Q Consensus 296 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a 374 (517)
............. -.+..+++|.++.| ...|+++..+. +...+...... +. ...
T Consensus 202 ~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~~~--~~~~~~~~~~~----------------~~------~~~ 256 (361)
T PRK00950 202 EYDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVPEW--LIDYYMRAKTP----------------FS------LTR 256 (361)
T ss_pred ccchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCCHH--HHHHHHHhcCC----------------CC------CCH
Confidence 1122222221111 14456799999744 55787766432 22222111000 00 122
Q ss_pred hHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHH
Q 010125 375 LKLWFVIRNYGV-ANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQI 453 (517)
Q Consensus 375 l~~~~~l~~~g~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (517)
+....+...+.. +.+++..++..++++++.+.|. +.+. ++..+.+.+++.+.
T Consensus 257 ~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~~---------------------- 309 (361)
T PRK00950 257 LSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTPM---------------------- 309 (361)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCCC----------------------
Confidence 333444444432 3355556666666666666554 4443 45566666666221
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 454 NEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 454 ~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
...++.+.|.++|+....+..+. +..++|++++ +.+++++++++|+++.
T Consensus 310 --~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~----~~~~~~~l~~~L~~il 360 (361)
T PRK00950 310 --TAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG----TFEENERFLEILKEIV 360 (361)
T ss_pred --CHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC----CHHHHHHHHHHHHHHh
Confidence 13466777777786554444332 3568999985 5569999999998764
No 158
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=1.6e-17 Score=169.64 Aligned_cols=312 Identities=13% Similarity=0.106 Sum_probs=201.3
Q ss_pred ChHHHHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 105 SIAGFLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 105 ~~~~~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
.+|..+.+.+.+.+... ...|.. +...+++ +++++.+|.+... .+++|+|+++++..++.+..+
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr----~~ia~~~~~~~~~------~I~~t~G~~~~i~~~~~~~~~---- 103 (356)
T PRK04870 39 RLPAELRAELGERLAEVALNRYPD-PRAAALK----AALRAAMGVPAGA------DVLLGNGSDELIQLLALACAK---- 103 (356)
T ss_pred CCCHHHHHHHHHHhhccccccCCC-CCHHHHH----HHHHHHhCcCCCC------cEEEcCCHHHHHHHHHHHhcC----
Confidence 34445566666555432 334543 4444455 4455556765421 578888888777655544322
Q ss_pred HhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcc
Q 010125 184 KIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAI 263 (517)
Q Consensus 184 ~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~ 263 (517)
+++.|++.+++|..+..+++..|+ +++.+|+++ ++.+|+++|+++++... +.+|+++.++|+|
T Consensus 104 -------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPt 166 (356)
T PRK04870 104 -------PGATVLAPEPGFVMYRMSAKLAGL---EFVGVPLTA--DFTLDLPAMLAAIAEHR-----PALVFLAYPNNPT 166 (356)
T ss_pred -------CCCEEEECCCCHHHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCC
Confidence 566788899999999999999999 999999874 57899999999986422 2367778899999
Q ss_pred ccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC
Q 010125 264 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST 343 (517)
Q Consensus 264 G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~ 343 (517)
|.+-+.+++.++++..++++++|++|..+.. ......+...++ -.+..+++|++.....+|+++..+ .... .+..
T Consensus 167 G~~~~~~~~~~i~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~~-~~i~-~~~~ 241 (356)
T PRK04870 167 GNLFDDADVERIIEAAPGLVVVDEAYQPFAG--DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGHP-AWIA-ELDK 241 (356)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCchhhcC--cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCCH-HHHH-HHHH
Confidence 9999998888888877999999999965432 111111221112 256677999544446688877643 2222 2211
Q ss_pred -CccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 010125 344 -NPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHF 421 (517)
Q Consensus 344 -~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~ 421 (517)
...+ . ...+...++...+ ..+.+++.+++..++++++.+.|++++++.+. ++..
T Consensus 242 ~~~~~-----------------~------~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~ 297 (356)
T PRK04870 242 VRPPY-----------------N------VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAA 297 (356)
T ss_pred ccCCC-----------------c------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCC
Confidence 1000 0 0122222222222 12346777888888999999999988888754 5555
Q ss_pred eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHH
Q 010125 422 AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVV 499 (517)
Q Consensus 422 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~ 499 (517)
+.+.+++. . ..++.+.|.++|+.......+. +..++|+++. +.+++++
T Consensus 298 ~~~~~~~~-~-------------------------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~----~~~~~~~ 347 (356)
T PRK04870 298 NFILVRVP-D-------------------------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG----TPEENAQ 347 (356)
T ss_pred eEEEEECC-C-------------------------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC----CHHHHHH
Confidence 66666543 2 1456666777887655444332 3569999985 5679999
Q ss_pred HHHHHHHH
Q 010125 500 AWTVVQQH 507 (517)
Q Consensus 500 l~~~l~~~ 507 (517)
++++|+++
T Consensus 348 l~~al~~~ 355 (356)
T PRK04870 348 FLAALKAA 355 (356)
T ss_pred HHHHHHHh
Confidence 99998764
No 159
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.81 E-value=3.8e-18 Score=174.78 Aligned_cols=234 Identities=18% Similarity=0.189 Sum_probs=165.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|...++|+. ++++.|.+ ..+++++|++|+..++.+... +++.|+++...|.+..
T Consensus 38 ~~p~~~~le~~----la~l~g~~---------~a~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~ 93 (369)
T cd00614 38 GNPTVDALEKK----LAALEGGE---------AALAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTY 93 (369)
T ss_pred CChhHHHHHHH----HHHHHCCC---------CEEEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHH
Confidence 56777777765 45556643 468889999999888876532 5566888888887654
Q ss_pred H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 K----AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 k----aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
. .+...|+ +++.++.+ |++++++++++.+ .+|++..+++++|.+.|+++|+++|++||++
T Consensus 94 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~~------~~v~~e~~~np~g~~~dl~~i~~la~~~g~~ 157 (369)
T cd00614 94 RLFERLLPKLGI---EVTFVDPD-------DPEALEAAIKPET------KLVYVESPTNPTLKVVDIEAIAELAHEHGAL 157 (369)
T ss_pred HHHHHHHhhcCe---EEEEeCCC-------CHHHHHHhcCCCC------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3 4456677 88888753 5889999886533 3788899999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCC--cceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL--DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
++||++|+.+....+ .. .++|.++.+++|+++.+. ..|+++.++++... .+.....++
T Consensus 158 livD~t~~~~~~~~~-~~------~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~-~l~~~~~~~------------ 217 (369)
T cd00614 158 LVVDNTFATPYLQRP-LE------LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQ-RLRFLRLAL------------ 217 (369)
T ss_pred EEEECCCcchhcCCh-hh------hCCcEEEeccceeccCCCCceEEEEEeCcHHHHH-HHHHHHHhh------------
Confidence 999999987654211 11 168999999999998653 36777776533322 221110110
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CeeE
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----------------HFAV 423 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----------------~~~~ 423 (517)
+-.......|+.++.+ +.+..++++..++++++.+.|++.|+++-+.-| ..++
T Consensus 218 --------g~~~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i 287 (369)
T cd00614 218 --------GTILSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGV 287 (369)
T ss_pred --------CCCCCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceE
Confidence 1112445667666544 567788999999999999999999877544322 3678
Q ss_pred EEEEecC
Q 010125 424 VCFRVSP 430 (517)
Q Consensus 424 v~f~~~~ 430 (517)
++|.+.+
T Consensus 288 ~s~~l~~ 294 (369)
T cd00614 288 FSFELKG 294 (369)
T ss_pred EEEEeCC
Confidence 8998864
No 160
>PRK10534 L-threonine aldolase; Provisional
Probab=99.81 E-value=4.1e-18 Score=172.43 Aligned_cols=311 Identities=14% Similarity=0.073 Sum_probs=185.6
Q ss_pred hHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 106 IAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 106 ~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+|.+.. .+.... .....|...|...++|+.+. +++|.++ .++++||+++++.++.+...
T Consensus 13 ~~~~~~-a~~~~~-~~~~~Y~~~~~~~~L~~~la----~~~g~~~---------~~v~~~g~~a~~~~l~~~~~------ 71 (333)
T PRK10534 13 SRAMLE-AMMAAP-VGDDVYGDDPTVNALQDYAA----ELSGKEA---------ALFLPTGTQANLVALLSHCE------ 71 (333)
T ss_pred CHHHHH-HHHhcc-CCCcccCCCHHHHHHHHHHH----HHhCCCe---------EEEeCchHHHHHHHHHHhcC------
Confidence 344443 444433 23345667788888887765 4467653 47888899998888775432
Q ss_pred cccCCCCeEEEeCCCCchHHHHH--HHHcC-CCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCc
Q 010125 186 GRENISKLIVYGSDQTHCALQKA--AQIVG-IDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA 262 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~ka--a~~~G-~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~ 262 (517)
++..|+++.+.|.+...+ +..+| + .++.++++. ++.+|+++|+++++++...+..+.+|+++. ++
T Consensus 72 -----~gd~vi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n--p~ 139 (333)
T PRK10534 72 -----RGEEYIVGQAAHNYLYEAGGAAVLGSI---QPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLEN--TH 139 (333)
T ss_pred -----CCCeeEEechhhhhHhcCCchHHhcCc---eEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEec--CC
Confidence 445577777788544432 34444 4 677777753 589999999999865321111233566554 34
Q ss_pred cccccChhH---HHHHHHHhCCeEEccccccccccc--CccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhH
Q 010125 263 ITAVDPLKP---LCDVAKQFGIWVHVDAAYAGSACI--CPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRAL 337 (517)
Q Consensus 263 ~G~idpl~e---I~~i~~~~gi~lhvDaA~g~~~~~--~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~ 337 (517)
+|.+.|.++ |+++|++||+|++||+||...... ....... ....|.++++++|.++.+ .|..++.+++..
T Consensus 140 ~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~---~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i 214 (333)
T PRK10534 140 NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEI---TQYCDSFTICLSKGLGTP--VGSLLVGNRDYI 214 (333)
T ss_pred CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHH---HhcCCEEEEEeEcCCCCc--ccceEEcCHHHH
Confidence 599877655 567899999999999997522110 1111111 123576778899988876 564445555543
Q ss_pred HhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 338 VSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 338 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
. .+.....+. ..+-...++.+.+++..+ +...+.+++..+.++++.+.|+++ ++++.
T Consensus 215 ~-~~~~~~~~~------------------~~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~- 271 (333)
T PRK10534 215 K-RARRWRKMT------------------GGGMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADVM- 271 (333)
T ss_pred H-HHHHHHHHh------------------CCchhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCccC-
Confidence 2 221100000 000011122222233322 122345555666788999999987 88765
Q ss_pred CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHH
Q 010125 418 PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 418 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 497 (517)
++..+++.+++.+. ...++.+.|.++|+..... ..+|++. +.+.+++++
T Consensus 272 ~~~~nfv~~~~~~~------------------------~~~~~~~~l~~~gi~v~~~------~~~rl~~-~~r~t~e~~ 320 (333)
T PRK10534 272 RQDTNMLFVRVGEE------------------------QAAALGEYMRERNVLINAS------PIVRLVT-HLDVSREQL 320 (333)
T ss_pred CCCceEEEEECCch------------------------hHHHHHHHHHHcCeeecCC------ceEEEEE-EeCCCHHHH
Confidence 55777777766421 1345667777888754322 2579987 456789999
Q ss_pred HHHHHHHHHHH
Q 010125 498 VVAWTVVQQHL 508 (517)
Q Consensus 498 ~~l~~~l~~~~ 508 (517)
++++++|++..
T Consensus 321 ~~~~~~l~~~~ 331 (333)
T PRK10534 321 AEVVAHWRAFL 331 (333)
T ss_pred HHHHHHHHHHh
Confidence 99999998654
No 161
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.81 E-value=2.7e-17 Score=171.95 Aligned_cols=324 Identities=12% Similarity=0.096 Sum_probs=207.3
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
..+...+.+++++++.+.+|..... ....+++|+|+++|+...+.+..+ +++.|++..+.|..+..
T Consensus 94 ~~G~~~LR~aiA~~l~~~~~~~~~v---~p~~Ivit~G~t~al~~l~~~l~~-----------pGD~Vlv~~P~Y~~f~~ 159 (447)
T PLN02607 94 YHGLKSFRQAMASFMEQIRGGKARF---DPDRIVLTAGATAANELLTFILAD-----------PGDALLVPTPYYPGFDR 159 (447)
T ss_pred CcchHHHHHHHHHHHHHhcCCCCCc---CHHHeEEcCChHHHHHHHHHHhCC-----------CCCEEEEcCCCCcchHH
Confidence 3456789999999999887731110 012689999999988665544322 66778899999988888
Q ss_pred HHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhCCeE
Q 010125 208 AAQ-IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWV 283 (517)
Q Consensus 208 aa~-~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~gi~l 283 (517)
.+. ..|+ +++.|+++.++++.+|++++++++++..+.|.++.+|+++.++||+|.+-+ +++|.++|++||+++
T Consensus 160 ~~~~~~g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~l 236 (447)
T PLN02607 160 DLRWRTGV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHL 236 (447)
T ss_pred HHHhcCCc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEE
Confidence 776 4688 999999876556789999999999887777777778888999999999865 788999999999999
Q ss_pred EcccccccccccCccccccc---cCCC--C-CC--eeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCcccc
Q 010125 284 HVDAAYAGSACICPEFRHFI---DGVE--G-AD--SFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATE 354 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~---~g~~--~-aD--si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 354 (517)
++|.+|+...+..+.+.+.. .... . .+ .+..++.|.++ ..+.+|+++..++... ..+.....|..
T Consensus 237 I~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~-~~~~~~~~~~~----- 310 (447)
T PLN02607 237 VSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV-TTARRMSSFTL----- 310 (447)
T ss_pred EEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHH-HHHHHHhhcCC-----
Confidence 99999987654322222211 1110 0 11 35578999997 6688999988655432 22211111100
Q ss_pred ccccccCCCccccCCCCCCchHHHHHHHHhcH-----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE-EEe
Q 010125 355 SMQVVDYKDWQITLSRRFRSLKLWFVIRNYGV-----ANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVC-FRV 428 (517)
Q Consensus 355 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~-----~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~-f~~ 428 (517)
. ..+...++...+.. .-+.+..++..+..+.+.+.|++. +++.. ++..++++ +++
T Consensus 311 -------------~----s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~-~~~ag~fvw~~L 371 (447)
T PLN02607 311 -------------V----SSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL-KGNAGLFCWMNL 371 (447)
T ss_pred -------------C----CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-cCCeeEEEEEEc
Confidence 0 11122222222222 223445566667778888888876 67654 45545444 444
Q ss_pred cCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 429 SPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINA-SGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
... .. ... .....++.+++.+ .|+...++..+. ..+|+|+|+++ .++++++..+++|.
T Consensus 372 ~~~-~~------------~~~----~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~--~~~~~l~~gl~Ri~ 432 (447)
T PLN02607 372 SPL-LE------------TPT----REGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN--MSEDTLEVALKRIH 432 (447)
T ss_pred hHh-hc------------CCC----chhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc--CCHHHHHHHHHHHH
Confidence 211 00 000 0112355555654 576544444443 36799999964 35779999999998
Q ss_pred HHHHHHH
Q 010125 506 QHLEAFQ 512 (517)
Q Consensus 506 ~~~~~l~ 512 (517)
++.++-.
T Consensus 433 ~~l~~~~ 439 (447)
T PLN02607 433 RFMDRRK 439 (447)
T ss_pred HHHHHHH
Confidence 8876433
No 162
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=2.5e-18 Score=175.06 Aligned_cols=283 Identities=13% Similarity=0.121 Sum_probs=190.8
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCC
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
.++.+++++.+|++++ .+++|+|+++++..++.+..+. ++..|+++.++|..+...++..|+
T Consensus 60 ~~l~~~~a~~~g~~~~-------~I~~~~Gs~e~i~~~~~~~~~~----------g~~~vli~~P~y~~y~~~~~~~G~- 121 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-------QVLVSRGADEGIELLIRAFCEP----------GKDAILYCPPTYGMYSVSAETIGV- 121 (351)
T ss_pred HHHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcCC----------CCCEEEEcCCCHHHHHHHHHHcCC-
Confidence 4677889999999876 7899999999887766554221 236788888999999999999999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh--CCeEEccccccccc
Q 010125 216 VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSA 293 (517)
Q Consensus 216 ~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~--gi~lhvDaA~g~~~ 293 (517)
+++.+|.+. ++.+|++++++++. .+ .+|+++.++|+||.+-+.+++.++++.. +.++++|+||.-+.
T Consensus 122 --~~~~v~~~~--~~~~d~~~l~~~~~-~~------~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~ 190 (351)
T PRK01688 122 --EIRTVPTLD--NWQLDLPAIADNLD-GV------KVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFC 190 (351)
T ss_pred --EEEEeecCC--CCCCCHHHHHHhcc-CC------cEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcC
Confidence 999999874 58999999998873 33 2788889999999998887777776542 68999999996654
Q ss_pred ccCccccccccCCCCCC-eeeeccccccC-CCCcceEEEEeCchhHHhhhc-CCccccCCccccccccccCCCccccCCC
Q 010125 294 CICPEFRHFIDGVEGAD-SFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLS-TNPEYLKNKATESMQVVDYKDWQITLSR 370 (517)
Q Consensus 294 ~~~~~~~~~~~g~~~aD-si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr 370 (517)
.. ......+.. ... .+.-+++|+++ ++..+|+++.. ++.. +.+. ...+| . .
T Consensus 191 ~~-~s~~~~~~~--~~n~iv~rSfSK~~glaGlRiGy~i~~-~~~i-~~l~~~~~~~-----------------~--v-- 244 (351)
T PRK01688 191 PQ-ASLAGWLAE--YPHLVILRTLSKAFALAGLRCGFTLAN-EEVI-NLLLKVIAPY-----------------P--L-- 244 (351)
T ss_pred CC-CChHHHHhh--CCCEEEEecchHhhcCHHHHHhHHhCC-HHHH-HHHHhccCCC-----------------C--C--
Confidence 11 111111111 112 45667999987 44667887753 3322 2221 11111 1 1
Q ss_pred CCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhcccc
Q 010125 371 RFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLL 447 (517)
Q Consensus 371 ~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~ 447 (517)
..+...++...+ +.+.+++.++...+.++++.+.|+++++++.+.++..+.+.+++. .
T Consensus 245 --~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~-~---------------- 305 (351)
T PRK01688 245 --STPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFT-A---------------- 305 (351)
T ss_pred --CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-C----------------
Confidence 111122222222 235567777788888899999999888875455666676666553 1
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeeeECC-EeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 448 SEEEQINEFNRELLESINASGKAYMTHAVLGG-IYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 448 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g-~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
..++.+.|.++|++........| ..++|+++. +.+++++++++|+
T Consensus 306 ---------~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~----~~~e~~~l~~al~ 351 (351)
T PRK01688 306 ---------SSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG----TREECQRVIDALR 351 (351)
T ss_pred ---------HHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC----CHHHHHHHHHhhC
Confidence 24567777788876554433322 468999985 4679999998873
No 163
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.81 E-value=3.1e-17 Score=169.82 Aligned_cols=327 Identities=13% Similarity=0.087 Sum_probs=206.6
Q ss_pred ChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCC-CceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 105 SIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGN-GGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 105 ~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~-~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
.+|..+.+.+...+. ....|....+..++.+.+++|+.+.+|++... .. ...++|+|+++++..++.+..+.
T Consensus 41 ~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~~~~i~it~Ga~~al~~~~~~l~~~--- 113 (393)
T TIGR03538 41 PTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGV---DPERHVLPVNGTREALFAFAQAVINP--- 113 (393)
T ss_pred CCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccC---CCCceEEECCCcHHHHHHHHHHHcCC---
Confidence 345566676666543 34456666677889999999999988875211 01 15788999999887766654331
Q ss_pred HhcccCCCC-eEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCc
Q 010125 184 KIGRENISK-LIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA 262 (517)
Q Consensus 184 ~~g~~~~~~-~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~ 262 (517)
++ ..|++.++++..+...++..|+ +++.||+++++++.+|+++|++++.++++ +|+++.++||
T Consensus 114 -------gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~k------~i~l~~p~NP 177 (393)
T TIGR03538 114 -------GQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFDAVPESVWRRCQ------LLFVCSPGNP 177 (393)
T ss_pred -------CCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHHHHHHHHhhcce------EEEEeCCCCC
Confidence 22 3478888999888889999999 99999997555578999999998865433 6777899999
Q ss_pred cccccC---hhHHHHHHHHhCCeEEcccccccccccCc-cccccc---cCCC--CC--Ceeeeccccc-cCCCCcceEEE
Q 010125 263 ITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRHFI---DGVE--GA--DSFSLNAHKW-FFATLDCCCLW 330 (517)
Q Consensus 263 ~G~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~-~~~~~~---~g~~--~a--Dsi~~~~hK~-l~~p~~~g~l~ 330 (517)
||.+-+ +++|+++|++||+++++|.+|+....... .....+ .... .. -.++.++.|. +.....+|+++
T Consensus 178 tG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i 257 (393)
T TIGR03538 178 TGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVA 257 (393)
T ss_pred cCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEe
Confidence 999865 88999999999999999999976543210 010110 0010 11 1566779995 55668899887
Q ss_pred EeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhc
Q 010125 331 VKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSG 409 (517)
Q Consensus 331 ~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~ 409 (517)
.. +.... .+.....+.. ....++..++++..+. .+.+++..+...+..+.+.+.|++
T Consensus 258 ~~-~~l~~-~~~~~~~~~~--------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 315 (393)
T TIGR03538 258 GD-AEILK-AFLRYRTYHG--------------------CAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQ 315 (393)
T ss_pred cC-HHHHH-HHHHHHHhhc--------------------cCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 64 32222 2211101110 0112233333344332 344556666777778888888876
Q ss_pred CCCeEEecCCCeeEE-EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--------C
Q 010125 410 DKRFEIVFPCHFAVV-CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--------G 479 (517)
Q Consensus 410 ~~~~~l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--------g 479 (517)
. +.+. .|..+.+ .+++. .. ..++.+.+. +.|+.+.++..+. +
T Consensus 316 ~--~~~~-~p~gg~f~~~~~~-~~------------------------~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~ 367 (393)
T TIGR03538 316 V--LDLE-LPDAGFYLWPKVP-GD------------------------DEAFARALYEEENVTVLPGRFLAREAEGVNPG 367 (393)
T ss_pred h--Cccc-CCCeeEEEEEECC-CC------------------------HHHHHHHHHHHCCEEEeCCccccccccCCCCC
Confidence 4 3333 3444444 44443 10 134555554 4676655544331 2
Q ss_pred EeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 480 IYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 480 ~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
..++|++++. +++++++++++|.+.
T Consensus 368 ~~~~Ris~~~---~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 368 EGRVRIALVA---PLEECVEAAERIRSF 392 (393)
T ss_pred CCEEEEEecC---CHHHHHHHHHHHHHh
Confidence 4689999864 467888888888653
No 164
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.81 E-value=3.3e-17 Score=160.51 Aligned_cols=327 Identities=17% Similarity=0.170 Sum_probs=219.1
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
..+..++-.++.+||+++.|++.- -+--..|+.+-+++|++.|.... ..|.. .+.++++++.+|-....
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~Dav--------sLQP~AGAqGE~aGll~Ir~YHe-~rG~~--~R~~~LIP~SAHGTNPA 172 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDAV--------SLQPNAGAQGEYAGLLAIRAYHE-SRGEG--HRNICLIPDSAHGTNPA 172 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcee--------eccCCCCcchhhHHHHHHHHHHH-HcCCC--cCcEEEeeccccCCChh
Confidence 346778888999999999999853 13334567778888888776532 22433 77899999999999999
Q ss_pred HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc-cChhHHHHHHHHhCCeEEcc
Q 010125 208 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVD 286 (517)
Q Consensus 208 aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i-dpl~eI~~i~~~~gi~lhvD 286 (517)
.|.+.|. +|+.|++++ +|.+|+++|++++.++++ ++.+|.++| .|.+ .+|.||++|.+++|-.+..|
T Consensus 173 SAam~G~---~VV~V~~~~--~G~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~D 240 (496)
T COG1003 173 SAAMAGF---KVVVVKCDE--NGNVDLDDLRAKAEDNLA------ALMITNPST-LGVFEEDIREICEIVHEAGGQVYYD 240 (496)
T ss_pred hHhhcCc---eEEEEecCC--CCCccHHHHHHHhcccee------EEEeccCcc-cccchhhHHHHHHHHHHcCCEEEec
Confidence 9999999 999999986 679999999999997765 788999987 5888 57999999999999999999
Q ss_pred cccccccccCccccccccCCCCCCeeeeccccccCCCCc-----ceEEEEeCchhHHhhhcCCccccCCcc--ccccc-c
Q 010125 287 AAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD-----CCCLWVKDPRALVSSLSTNPEYLKNKA--TESMQ-V 358 (517)
Q Consensus 287 aA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-----~g~l~~~~~~~~~~~~~~~~~yl~~~~--~~~~~-~ 358 (517)
||---..+-.-. .|--++|++-+|.||+|..|.| .|-+-++.. +. +|+-... ..... .
T Consensus 241 GANlNA~vG~~r-----PGd~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L~-------pfLP~p~~~~~~~~y~ 306 (496)
T COG1003 241 GANLNAIVGLAR-----PGDMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--LA-------PFLPGPVVYHDVGEYR 306 (496)
T ss_pred Ccchhhhhcccc-----ccccccceEEeecccccccCCCCCCCCCCceehHhh--cc-------ccCCCCcccCCCcccc
Confidence 986322221111 1222899999999999987754 455666522 22 2332110 00000 0
Q ss_pred ccC-CCccccCCCCC----Cc-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC---eeEEEEEec
Q 010125 359 VDY-KDWQITLSRRF----RS-LKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCH---FAVVCFRVS 429 (517)
Q Consensus 359 ~~~-~~~~~~~sr~~----~a-l~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~---~~~v~f~~~ 429 (517)
.+. ..+++..+..+ .. ...|+.++.+|.+|+++.-+...-+|+|+.++|+. .++++..+. ..-+.+...
T Consensus 307 ~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild~r 384 (496)
T COG1003 307 LDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILDAR 384 (496)
T ss_pred ccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEeech
Confidence 000 11222222221 11 47799999999999999999999999999999986 566654333 223334433
Q ss_pred CCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECC---EeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 430 PSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGG---IYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g---~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
+.. +........+.++|.+.|.- .+|...- ...+=+=.+ -.-+++++|++++++.+
T Consensus 385 ~l~------------------~~~Gv~~~DvAKrLlD~GfH--aPT~~FPliV~~tLMIEPT-EsEsk~eLDrf~dami~ 443 (496)
T COG1003 385 PLK------------------KETGVRALDVAKRLLDYGFH--APTMYFPLIVAGTLMIEPT-ESESKEELDRFIDAMIA 443 (496)
T ss_pred HhH------------------hhcCCcHHHHHHHHHhcCCC--CCcccCccccccceeecCC-CCCCHHHHHHHHHHHHH
Confidence 220 11122345667777777853 2221110 122333333 24466899999999999
Q ss_pred HHHHHHhh
Q 010125 507 HLEAFQSA 514 (517)
Q Consensus 507 ~~~~l~~~ 514 (517)
+.++..+.
T Consensus 444 I~~Ea~~~ 451 (496)
T COG1003 444 IREEADAV 451 (496)
T ss_pred HHHHHHhc
Confidence 98887653
No 165
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.80 E-value=1.3e-17 Score=171.62 Aligned_cols=234 Identities=16% Similarity=0.172 Sum_probs=159.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|...++|+. +++++|.+ ..+++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 59 ~~pt~~~Le~~----lA~l~G~~---------~al~~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~~~y~~~~ 114 (386)
T PRK06767 59 GNPTVKLFEER----MAVLEGGE---------EALAFGSGMAAISATLIGFLK-----------AGDHIICSNGLYGCTY 114 (386)
T ss_pred CCcchHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 55666666654 66666754 357788888887766654422 5667888888887655
Q ss_pred HHHHH----cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KAAQI----VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 kaa~~----~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
..... .|+ ++..++. .|++++++++++.++ +|+++.++|++|.+-|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~~~-------~d~~~l~~~i~~~tk------lV~lesp~NptG~v~dl~~I~~la~~~g~~ 178 (386)
T PRK06767 115 GFLEVLEEKFMI---THSFCDM-------ETEADIENKIRPNTK------LIFVETPINPTMKLIDLKQVIRVAKRNGLL 178 (386)
T ss_pred HHHHHHHhhcCe---EEEEeCC-------CCHHHHHHhhCcCce------EEEEeCCCCCCceecCHHHHHHHHHHcCCE
Confidence 54433 344 4544432 378999998876443 888899999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
+|||+||+.+....+ . ..++|+++.+++|+++++.. .|+++.+++. +.+........+.
T Consensus 179 vivD~a~a~~~~~~p-l------~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~-i~~~~~~~~~~~g----------- 239 (386)
T PRK06767 179 VIVDNTFCSPYLQRP-L------ELGCDAVVHSATKYIGGHGDVVAGVTICKTRA-LAEKIRPMRKDIG----------- 239 (386)
T ss_pred EEEECCCcccccCCc-h------hcCCcEEEecCcceecCCCCceeEEEEeChHH-HHHHHHHHHHHhC-----------
Confidence 999999975443222 1 12789999999999987654 5777665542 2211110000010
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------CeeEEEEEec
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----------HFAVVCFRVS 429 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----------~~~~v~f~~~ 429 (517)
-...++..|+.++ |.+.+..++++..++++++.+.|+++|+++.+..| ..++++|.+.
T Consensus 240 ---------~~~~~~~a~l~~~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~ 308 (386)
T PRK06767 240 ---------GIMAPFDAWLLLR--GLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIK 308 (386)
T ss_pred ---------CCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEc
Confidence 0113344565554 44566778899999999999999999999865433 3468999885
Q ss_pred C
Q 010125 430 P 430 (517)
Q Consensus 430 ~ 430 (517)
.
T Consensus 309 ~ 309 (386)
T PRK06767 309 G 309 (386)
T ss_pred C
Confidence 3
No 166
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=2.5e-17 Score=168.43 Aligned_cols=306 Identities=12% Similarity=0.092 Sum_probs=196.8
Q ss_pred HHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccC
Q 010125 110 LGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 189 (517)
Q Consensus 110 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~ 189 (517)
+.+.+...++. ..|...++..++++.++ +.+|.+++ ..++|+|+++++..++.+..+
T Consensus 47 v~~a~~~~~~~--~~~~p~~g~~~lr~~ia----~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~---------- 103 (359)
T PRK03158 47 VKEAIAAHLDE--LALYPDGYAPELRTKVA----KHLGVDEE-------QLLFGAGLDEVIQMISRALLN---------- 103 (359)
T ss_pred HHHHHHHHHHH--hhcCCCCcHHHHHHHHH----HHhCCCHH-------HEEECCCHHHHHHHHHHHHhC----------
Confidence 45555444432 12333345555555544 44566554 689999999887655444321
Q ss_pred CCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccCh
Q 010125 190 ISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPL 269 (517)
Q Consensus 190 ~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl 269 (517)
+++.|++.++++..+..++...|+ +++.+|++ ++.+|+++|++++++.++ +|+++.++++||.+-|.
T Consensus 104 -~gd~v~~~~p~y~~~~~~~~~~g~---~~~~~~~~---~~~~d~~~l~~~~~~~~~------~v~i~~p~NPtG~~~~~ 170 (359)
T PRK03158 104 -PGTNTVMAEPTFSQYRHNAIIEGA---EVREVPLK---DGGHDLEAMLKAIDEQTK------IVWICNPNNPTGTYVNH 170 (359)
T ss_pred -CCCEEEEcCCCHHHHHHHHHHcCC---eEEEEecC---CCCcCHHHHHHhcCCCCC------EEEEeCCCCCCCCCCCH
Confidence 556788888999999999999999 99999986 357999999988765432 67778999999999999
Q ss_pred hHHHHHHHH--hCCeEEcccccccccccCc--cccccccCCCCCCeeeeccccccCC-CCcceEEEEeCchhHHhhhcCC
Q 010125 270 KPLCDVAKQ--FGIWVHVDAAYAGSACICP--EFRHFIDGVEGADSFSLNAHKWFFA-TLDCCCLWVKDPRALVSSLSTN 344 (517)
Q Consensus 270 ~eI~~i~~~--~gi~lhvDaA~g~~~~~~~--~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~~~~~~~~~~~~~~ 344 (517)
++|.++++. +|+++++|++|..+..... .....+... .-..+..++.|.++. ...+|+++... +.. +.+...
T Consensus 171 ~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~-~~vi~~~S~SK~~g~~GlRiG~~v~~~-~~~-~~~~~~ 247 (359)
T PRK03158 171 EELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKY-ENLIVLRTFSKAYGLAALRVGYGIASE-ELI-EKLNIA 247 (359)
T ss_pred HHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhc-CCEEEEEechHhhcCcchhhehhcCCH-HHH-HHHHHh
Confidence 999999987 5999999999976553211 000111111 223556789999984 46778887643 222 222111
Q ss_pred ccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeE
Q 010125 345 PEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAV 423 (517)
Q Consensus 345 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~ 423 (517)
... + ....+...++...+. .+.+++..+...++.+++.+.|++. ++.+. ++..+.
T Consensus 248 ~~~----------------~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~ 303 (359)
T PRK03158 248 RPP----------------F------NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNF 303 (359)
T ss_pred cCC----------------C------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcE
Confidence 000 0 013334444444442 2334555566677788888888877 67664 455555
Q ss_pred EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 010125 424 VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTV 503 (517)
Q Consensus 424 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~ 503 (517)
+++.+... ..++.+.|.+.|+.+.++..+....++|++++ +.+++++++++
T Consensus 304 i~~~~~~~-------------------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~----~~~~~~~l~~a 354 (359)
T PRK03158 304 IFVDTGRD-------------------------ANELFEALLKKGYIVRSGAALGFPTGVRITIG----LKEQNDKIIEL 354 (359)
T ss_pred EEEECCCC-------------------------HHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHH
Confidence 54444211 24566777777876665544544679999985 67799999999
Q ss_pred HHHH
Q 010125 504 VQQH 507 (517)
Q Consensus 504 l~~~ 507 (517)
|+++
T Consensus 355 l~~~ 358 (359)
T PRK03158 355 LKEL 358 (359)
T ss_pred HHHh
Confidence 9774
No 167
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=2.4e-17 Score=168.66 Aligned_cols=235 Identities=16% Similarity=0.195 Sum_probs=166.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
...|....+|+. ++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+.
T Consensus 50 ~~npt~~~Le~~----lA~leg~e---------~ivvt~gg~~Ai~~~l~all~-----------~Gd~Il~~~~~y~~~ 105 (388)
T PRK08861 50 SGNPNRGLLEQT----LSELESGK---------GAVVTNCGTSALNLWVSALLG-----------PDDLIVAPHDCYGGT 105 (388)
T ss_pred CCCchHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCchHHH
Confidence 355667777765 55555532 689999999999877765432 566788888888765
Q ss_pred HHHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC
Q 010125 206 QKAA----QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 281 (517)
Q Consensus 206 ~kaa----~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi 281 (517)
.... ...|+ +++.++ ..|+++++++++++++ +|+++.++|++|.+-|+++|+++|+++|+
T Consensus 106 ~~~~~~~~~~~gi---~v~~vd-------~~d~e~l~~~i~~~tk------lV~lesP~NPtG~v~dl~~I~~la~~~gi 169 (388)
T PRK08861 106 YRLFNTRANKGDF---KVQFVD-------QSDAAALDAALAKKPK------LILLETPSNPLVRVVDIAELCQKAKAVGA 169 (388)
T ss_pred HHHHHHHHhcCCe---EEEEEC-------CCCHHHHHHhcCcCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 4433 22345 666664 2488999998876543 88899999999999999999999999999
Q ss_pred eEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 282 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
+++||.+|+.+....+ . . -++|.++.+.|||+++|.+ .|++.+++++...+ +. ++..
T Consensus 170 ~vIvDea~~~~~~~~p-l-~-----~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~-~~----~~~~--------- 228 (388)
T PRK08861 170 LVAVDNTFLTPVLQKP-L-E-----LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEE-LA----WWGN--------- 228 (388)
T ss_pred EEEEECCccccccCCC-c-c-----cCCCEEEeecceeccCCCcceeEEEEecHHHHHHH-HH----HHHh---------
Confidence 9999999987654322 1 1 1799999999999998865 57666665543221 11 0100
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC-----C-----------Cee
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV-FP-----C-----------HFA 422 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~-~~-----~-----------~~~ 422 (517)
..+....+...|..++ |.+-+.-+++++.++|..+.+.|++.|.++-+ .| | ..+
T Consensus 229 -------~~G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg 299 (388)
T PRK08861 229 -------CIGATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGS 299 (388)
T ss_pred -------ccCCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCc
Confidence 1122234556776665 66788899999999999999999999987533 22 1 245
Q ss_pred EEEEEecC
Q 010125 423 VVCFRVSP 430 (517)
Q Consensus 423 ~v~f~~~~ 430 (517)
+++|.+..
T Consensus 300 ~~sf~~~~ 307 (388)
T PRK08861 300 MLSFEFAG 307 (388)
T ss_pred eEEEEeCC
Confidence 78888863
No 168
>PRK05968 hypothetical protein; Provisional
Probab=99.80 E-value=1.5e-17 Score=171.09 Aligned_cols=231 Identities=14% Similarity=0.194 Sum_probs=159.0
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH--
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL-- 205 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~-- 205 (517)
.|...++| +.+++++|.+. .+++++|+.|+..++.+... +++.|+++...|.+.
T Consensus 62 ~p~~~~le----~~lA~l~g~~~---------av~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~y~~t~~ 117 (389)
T PRK05968 62 NPTVRAFE----EMLAKLEGAED---------ARGFASGMAAISSTVLSFVE-----------PGDRIVAVRHVYPDAFR 117 (389)
T ss_pred ChhHHHHH----HHHHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHHH
Confidence 34555555 45677777753 46677888888777654321 556678887887653
Q ss_pred --HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 206 --QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 206 --~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
.+.+...|+ +++.++.+ |+++|++++ +.+ .+|++..++++++.+.|+++|+++|++||+++
T Consensus 118 ~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i-~~t------klV~ie~pt~~~~~~~dl~~i~~la~~~gi~v 180 (389)
T PRK05968 118 LFETILKRMGV---EVDYVDGR-------DEEAVAKAL-PGA------KLLYLESPTSWVFELQDVAALAALAKRHGVVT 180 (389)
T ss_pred HHHHHHHHcCc---eEEEeCCC-------CHHHHHHhc-ccC------CEEEEECCCCCCCcHHHHHHHHHHHHHcCCEE
Confidence 356677788 88888642 788999887 333 26788889999999999999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccccC
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDY 361 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 361 (517)
+||++|+.+....+ .. .++|.++.++||++++|-+ .|+++ .+++...+.......++.
T Consensus 181 ivD~a~a~~~~~~p-~~------~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g------------ 240 (389)
T PRK05968 181 MIDNSWASPVFQRP-IT------LGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLG------------ 240 (389)
T ss_pred EEECCCcchhccCc-hh------cCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCC------------
Confidence 99999976653222 11 2689999999999998754 56555 444333221111111111
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC------------CeeEEEEEec
Q 010125 362 KDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC------------HFAVVCFRVS 429 (517)
Q Consensus 362 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~------------~~~~v~f~~~ 429 (517)
-.......|..++ +.+.+..++++..++++++.+.|+++|+++.+..| ..++++|.+.
T Consensus 241 --------~~~~~~~A~~~l~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~ 310 (389)
T PRK05968 241 --------AKLSPFEAWLLLR--GLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFR 310 (389)
T ss_pred --------CCCChHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEEC
Confidence 0113455555544 45677899999999999999999999998665433 1358899886
No 169
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.80 E-value=3.3e-17 Score=168.10 Aligned_cols=288 Identities=13% Similarity=0.061 Sum_probs=190.3
Q ss_pred HHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCC
Q 010125 138 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVK 217 (517)
Q Consensus 138 v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~ 217 (517)
+++.+++++|.+++ ..++|+|+++++...+.+..+ +++.|++++++|..+...++..|+
T Consensus 72 lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~l~~-----------~gd~vl~~~p~y~~~~~~~~~~g~--- 130 (367)
T PRK02731 72 LKAALAEKFGVDPE-------RIILGNGSDEILELLARAYLG-----------PGDEVIYSEHGFAVYPIAAQAVGA--- 130 (367)
T ss_pred HHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEecCCHHHHHHHHHHcCC---
Confidence 44555566677654 688999888776544433311 456788888898888888888999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh--CCeEEccccccccccc
Q 010125 218 NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSACI 295 (517)
Q Consensus 218 ~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~--gi~lhvDaA~g~~~~~ 295 (517)
+++.+|.+ ++.+|+++|++++++.+ .+|+++.++++||.+-|.++|.++|+.+ |+|+++|++|..+...
T Consensus 131 ~~~~~~~~---~~~~~~~~l~~~~~~~~------~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~ 201 (367)
T PRK02731 131 KPVEVPAK---DYGHDLDAMLAAVTPRT------RLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRR 201 (367)
T ss_pred eEEEeccc---CCCCCHHHHHHHhCCCC------cEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccC
Confidence 99999984 46899999999986433 3777889999999999999999999875 9999999999765432
Q ss_pred Ccccc--ccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCC
Q 010125 296 CPEFR--HFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRF 372 (517)
Q Consensus 296 ~~~~~--~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 372 (517)
..... ..+. ...-..++.++.|.++ .+..+|+++.++. . .+.+...... +. .
T Consensus 202 ~~~~~~~~~~~-~~~~~i~~~S~SK~~g~~G~RiG~l~~~~~-~-~~~l~~~~~~----------------~~------~ 256 (367)
T PRK02731 202 KDYEDGLELVA-KFPNVVVTRTFSKAYGLAGLRVGYGIAPPE-I-IDALNRVRQP----------------FN------V 256 (367)
T ss_pred cCcccHHHHHh-hcCCEEEEeeehHhhcCcccceeeeeCCHH-H-HHHHHHccCC----------------CC------C
Confidence 11111 1111 1111245557899886 4467899887532 2 2222211000 00 1
Q ss_pred CchHHHHHHHHhcH-HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHH
Q 010125 373 RSLKLWFVIRNYGV-ANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEE 451 (517)
Q Consensus 373 ~al~~~~~l~~~g~-~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (517)
..+..+++...+.. +.+++..++..++.+++.+.|++. ++.+. ++..+++++++.+.
T Consensus 257 ~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~~-------------------- 314 (367)
T PRK02731 257 NSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDDG-------------------- 314 (367)
T ss_pred CHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCCC--------------------
Confidence 23445555555532 345667777788888999999887 77665 55667777776321
Q ss_pred HHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 452 QINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 452 ~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
....++.+.|.++|+.......+....++|++++ +.+++++++++|+++.+
T Consensus 315 ---~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~----~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 315 ---KDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG----TEEENRRFLAALKEFLA 365 (367)
T ss_pred ---CCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHh
Confidence 1135567777777865544333322468999984 56799999999988753
No 170
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.80 E-value=3.2e-17 Score=171.73 Aligned_cols=302 Identities=12% Similarity=0.062 Sum_probs=199.3
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCch
Q 010125 124 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHC 203 (517)
Q Consensus 124 ~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~ 203 (517)
.|....+..++.+.+.+|+.+.++.+ . .+++|+|+++++..++.+..+ +++.|++.+++|.
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~-~-------~Iiit~G~~~al~~~~~~l~~-----------pgd~Vlv~~P~y~ 176 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPVA-F-------EIDLTSGAIDAIERLLCAHLL-----------PGDSVAVEDPCFL 176 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCCc-C-------eEEEecCcHHHHHHHHHHhCC-----------CCCEEEEeCCCcH
Confidence 45555556778888888887644322 2 689999999988777665533 5667888899999
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEee-ccCCccccccChh---HHHHHHHHh
Q 010125 204 ALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCAT-IGTTAITAVDPLK---PLCDVAKQF 279 (517)
Q Consensus 204 s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t-~gtt~~G~idpl~---eI~~i~~~~ 279 (517)
.+..+++..|+ +++.||++. + .+|+++|+++++..+ .+++++ .++||||.+-+.+ +|.++|++|
T Consensus 177 ~~~~~~~~~g~---~~~~v~~~~--~-g~~~~~l~~~~~~~~------k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~ 244 (431)
T PRK15481 177 SSINMLRYAGF---SASPVSVDA--E-GMQPEKLERALAQGA------RAVILTPRAHNPTGCSLSARRAAALRNLLARY 244 (431)
T ss_pred HHHHHHHHcCC---eEEeeccCC--C-CCCHHHHHHHHhcCC------CEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence 99999999999 999999974 2 489999999986533 245555 8999999998765 999999999
Q ss_pred -CCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 280 -GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 280 -gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
++|+++|.+|+-+... .....+.....--.+.-+++|.++....+|+++.. +.. ...+.....+..
T Consensus 245 ~~~~ii~De~Y~~~~~~--~~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~-~~~-~~~~~~~~~~~~--------- 311 (431)
T PRK15481 245 PQVLVIIDDHFALLSSS--PYHSVIPQTTQRWALIRSVSKALGPDLRLAFVASD-SAT-SARLRLRLNSGT--------- 311 (431)
T ss_pred CCceEEecCchhhhccC--CCCCCCcCCCCCEEEEeeeccccCCCceeEEEeCC-HHH-HHHHHHHHhccc---------
Confidence 9999999999765421 11111211111225666799999966888977653 322 222211100000
Q ss_pred ccCCCccccCCCCCCchHHHHHHHHhcH----HHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcc
Q 010125 359 VDYKDWQITLSRRFRSLKLWFVIRNYGV----ANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVL 434 (517)
Q Consensus 359 ~~~~~~~~~~sr~~~al~~~~~l~~~g~----~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~ 434 (517)
.....+..+++...+.. +.+++..+...+..+.+.+.|++. ++++..+...+.+.+++...
T Consensus 312 -----------~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~~--- 376 (431)
T PRK15481 312 -----------QWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDTD--- 376 (431)
T ss_pred -----------cCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCCC---
Confidence 00122333444444422 235666777888888899999876 66654344444444444321
Q ss_pred hhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC---CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 435 MDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG---GIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
..++.+.+.+.|+.+.++..+. +..++|++++. .++++++++++.|.++.
T Consensus 377 ----------------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 377 ----------------------SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST--LNDAEINRLAADLHQAL 429 (431)
T ss_pred ----------------------HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC--CChHHHHHHHHHHHHHh
Confidence 2345666667888776655442 13589999964 35779999999998764
No 171
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.80 E-value=3.1e-17 Score=168.90 Aligned_cols=234 Identities=18% Similarity=0.235 Sum_probs=162.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|...++| +.+++++|.+ ..++++||++|+..++.+... +++.|+++...|.+..
T Consensus 59 ~~p~~~~le----~~la~l~g~~---------~~v~~ssG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~t~ 114 (390)
T PRK08133 59 TNPTVTMFQ----ERLAALEGAE---------ACVATASGMAAILAVVMALLQ-----------AGDHVVSSRSLFGSTV 114 (390)
T ss_pred CChHHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCcchhHH
Confidence 345555555 5566777764 368899999999887765432 5567888888886543
Q ss_pred ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 ----KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 ----kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
+.+...|+ +++.++++ |+++++++|+++++ +|+++.+++++|.+.|+++|+++|++||++
T Consensus 115 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~tk------lV~ie~p~NptG~v~dl~~I~~la~~~gi~ 178 (390)
T PRK08133 115 SLFEKIFARFGI---ETTFVDLT-------DLDAWRAAVRPNTK------LFFLETPSNPLTELADIAALAEIAHAAGAL 178 (390)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCCe------EEEEECCCCCCCCcCCHHHHHHHHHHcCCE
Confidence 35567788 88888753 78899999876543 788889999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc-ceEEEEeCchhHHhhhcCCccccCCccccccccccC
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD-CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDY 361 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 361 (517)
+++|++|+.+....+ .. .++|.++.++||+++.+-. .|.+++.++....+.. .++..
T Consensus 179 livD~t~~~~~~~~p-l~------~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~~~~~----~~~~~----------- 236 (390)
T PRK08133 179 LVVDNCFCTPALQQP-LK------LGADVVIHSATKYLDGQGRVLGGAVVGSKELMEEVF----GFLRT----------- 236 (390)
T ss_pred EEEECCCcccccCCc-hh------hCCcEEEeecceeecCCcceEeEEEEcCHHHHHHHH----HHHHH-----------
Confidence 999999976544322 11 1689999999999986532 3334443333322111 11110
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CeeEE
Q 010125 362 KDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----------------HFAVV 424 (517)
Q Consensus 362 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----------------~~~~v 424 (517)
.+........|..++ |.+.+..++++..+++..+.+.|++.|+++-+.-| ..+++
T Consensus 237 ------~g~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~ 308 (390)
T PRK08133 237 ------AGPTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIV 308 (390)
T ss_pred ------hCCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEE
Confidence 111224455666654 56788999999999999999999999988654322 14578
Q ss_pred EEEecC
Q 010125 425 CFRVSP 430 (517)
Q Consensus 425 ~f~~~~ 430 (517)
+|.+.+
T Consensus 309 s~~l~~ 314 (390)
T PRK08133 309 SFEVKG 314 (390)
T ss_pred EEEEcC
Confidence 888853
No 172
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.80 E-value=1.8e-17 Score=170.49 Aligned_cols=235 Identities=17% Similarity=0.218 Sum_probs=162.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH--
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA-- 204 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s-- 204 (517)
..|...++|+. ++++.|.+ ..+++++|++|+..++.+... +++.|+++...|.+
T Consensus 57 ~~p~~~~le~~----lA~l~g~~---------~av~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t~ 112 (391)
T TIGR01328 57 GNPTVSNLEGR----IAFLEGTE---------AAVATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCTF 112 (391)
T ss_pred CCchHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHHH
Confidence 45666667755 66666764 358889999888776655422 55667888777643
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 205 --LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 205 --~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
+...+...|+ +++.++.+ |+++++++|+++++ +|++..+++++|.+-|+++|+++|++||++
T Consensus 113 ~~~~~~~~~~G~---~~~~vd~~-------d~e~l~~~i~~~tk------lV~le~p~Np~G~v~dl~~I~~la~~~gi~ 176 (391)
T TIGR01328 113 ALLEHALTKFGI---QVDFINMA-------IPEEVKAHIKDNTK------IVYFETPANPTMKLIDMERVCRDAHSQGVK 176 (391)
T ss_pred HHHHHHHhcCCe---EEEEECCC-------CHHHHHHhhccCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3445566787 88888653 78999998876543 788889999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
++||+||+.+....+ . -.++|.++.+++|+++.+-+ .|++ +.+++...+.......++
T Consensus 177 livD~a~a~~~~~~~-~------~~g~Divv~S~sK~lgg~g~~~gG~v-~~~~~li~~l~~~~~~~~------------ 236 (391)
T TIGR01328 177 VIVDNTFATPMLTNP-V------ALGVDVVVHSATKYIGGHGDVVAGLI-CGKAELLQQIRMVGIKDM------------ 236 (391)
T ss_pred EEEECCCchhccCCc-h------hcCCCEEEccccccccCCCCceEEEE-EcCHHHHHHHHHHHHHhC------------
Confidence 999999976543221 1 12799999999999987654 3544 445543322211000000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CeeE
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----------------HFAV 423 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----------------~~~~ 423 (517)
.+........|.+++ +.+.+..++++..++++++.+.|++.|+++-+.-| ..++
T Consensus 237 -------~g~~l~~~~a~l~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~ 307 (391)
T TIGR01328 237 -------TGSVISPFDAWLILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGM 307 (391)
T ss_pred -------CCCCCCcHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCce
Confidence 111234456676665 45667788999999999999999999987644221 1457
Q ss_pred EEEEecC
Q 010125 424 VCFRVSP 430 (517)
Q Consensus 424 v~f~~~~ 430 (517)
++|.+.+
T Consensus 308 ~s~~~~~ 314 (391)
T TIGR01328 308 ITFELKG 314 (391)
T ss_pred EEEEeCC
Confidence 8888864
No 173
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.79 E-value=2.8e-18 Score=168.02 Aligned_cols=307 Identities=9% Similarity=0.033 Sum_probs=211.6
Q ss_pred HHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcccc-cccccccChhhHHHHHHHHHHHHHHcCCCcccc
Q 010125 75 TILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNI-VGFNWISSPAATELENIVMDWLGQMLKLPKSFL 153 (517)
Q Consensus 75 ~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~ 153 (517)
.|..++.+........ +| +|.-...-.+|..+.+.+...... ....|..+-+..++.+.+++.+++++|.....
T Consensus 18 ~vw~e~~~la~e~~~~--~~--LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~- 92 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVP--NP--LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDP- 92 (420)
T ss_pred cHHHHHHHHHHhcCCC--Cc--ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCC-
Confidence 4555555544433222 22 665555667788888888776643 35677777789999999999999987753211
Q ss_pred cCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecC------CC
Q 010125 154 FSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTT------KS 227 (517)
Q Consensus 154 ~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d------~~ 227 (517)
...+++|.|+.+|+..++++..+ +++.|++-++.+.+......++|. ..+.||.. ..
T Consensus 93 ---~~eVlVT~GA~~ai~~~~~~l~~-----------~GDeVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s 155 (420)
T KOG0257|consen 93 ---DDEVLVTAGANEAISSALLGLLN-----------PGDEVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSS 155 (420)
T ss_pred ---cccEEEecCchHHHHHHHHHHcC-----------CCCEEEEecCcchhhhhHHhhcCC---cceeeccccccccccC
Confidence 13799999999999988887765 667788889999999999999999 88999887 33
Q ss_pred CCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhCCeEEcccccccccccCcccccc--
Q 010125 228 SSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-- 302 (517)
Q Consensus 228 ~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~-- 302 (517)
.++.+|.+.||.++++.++ +|+++.++||+|.+.+ |++|++||++||+|++.|.+|........++-..
T Consensus 156 ~~~~~D~~~le~~~t~kTk------~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~as 229 (420)
T KOG0257|consen 156 SDWTLDPEELESKITEKTK------AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIAS 229 (420)
T ss_pred ccccCChHHHHhhccCCcc------EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeec
Confidence 5799999999999999886 8999999999999854 8999999999999999999997665544322211
Q ss_pred ccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCC---CchHHH
Q 010125 303 IDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRF---RSLKLW 378 (517)
Q Consensus 303 ~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~---~al~~~ 378 (517)
+.|+.....=+.++.|+++ +.+..|.++. ++..+...+..+... .+.++..+ .+.+..
T Consensus 230 lPgm~ertitvgS~gKtf~~TGWrlGW~ig-p~~L~~~~~~vh~~~-----------------~~~~~Tp~q~A~a~a~~ 291 (420)
T KOG0257|consen 230 LPGMYERTITVGSFGKTFGVTGWRLGWAIG-PKHLYSALFPVHQNF-----------------VFTCPTPIQEASAAAFA 291 (420)
T ss_pred CCchhheEEEeccccceeeeeeeeeeeeec-hHHhhhhHHHHhhcc-----------------ccccCcHHHHHHHHHHh
Confidence 2455455555667999996 5678888887 554443222211111 11122111 111111
Q ss_pred HHH--HHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEe
Q 010125 379 FVI--RNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRV 428 (517)
Q Consensus 379 ~~l--~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~ 428 (517)
..+ +.-+ ..-..++.+.+.++++.|.+.|.++ |+.+..+.....+...+
T Consensus 292 ~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~v~~p~gayyl~adf 343 (420)
T KOG0257|consen 292 LELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLKVTGPEGAYYLWADF 343 (420)
T ss_pred hhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCccccCCCceEEEEec
Confidence 111 1111 1334458889999999999999998 89887544333333333
No 174
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.79 E-value=4.3e-17 Score=168.14 Aligned_cols=235 Identities=15% Similarity=0.214 Sum_probs=162.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|....+|+ .+++++|.+. .+++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 63 ~~p~~~~Le~----~lA~l~G~~~---------~~~~~sG~~Ai~~~l~~~l~-----------~Gd~Vl~~~~~y~~~~ 118 (398)
T PRK07504 63 SNPTVDMFEK----RMCALEGAED---------ARATASGMAAVTAAILCQVK-----------AGDHVVAARALFGSCR 118 (398)
T ss_pred CCchHHHHHH----HHHHHhCCCe---------eeEecCHHHHHHHHHHHHhC-----------CCCEEEEcCCchhHHH
Confidence 3556666664 4667778764 35677888888766654321 5567888888777543
Q ss_pred H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 K----AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 k----aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
. .+...|+ +++.++ .+|+++++++|+++++ +|+++.+++++|.+-|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd-------~~d~e~l~~ai~~~tk------lV~lesp~NptG~v~dl~~I~~la~~~gi~ 182 (398)
T PRK07504 119 YVVETLLPRYGI---ESTLVD-------GLDLDNWEKAVRPNTK------VFFLESPTNPTLEVIDIAAVAKIANQAGAK 182 (398)
T ss_pred HHHHHHHhhcCe---EEEEEC-------CCCHHHHHHhcCcCce------EEEEECCCCCCcEecCHHHHHHHHHHcCCE
Confidence 3 3445677 777774 3689999999976554 899999999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCccccCCccccccccccC
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDY 361 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 361 (517)
++||++|+.+....+. . .++|.++.++||+++.+- ..|.+++.++..+.+.+. .++.
T Consensus 183 lvvD~a~a~~~~~~~~--~-----~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~------------ 240 (398)
T PRK07504 183 LVVDNVFATPLFQKPL--E-----LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFR------------ 240 (398)
T ss_pred EEEECCccccccCCch--h-----hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHH------------
Confidence 9999999765443211 1 168999999999997652 344344444433322111 1111
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EecC-----CC-----------eeEE
Q 010125 362 KDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFE-IVFP-----CH-----------FAVV 424 (517)
Q Consensus 362 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-l~~~-----~~-----------~~~v 424 (517)
..+........|.+++ |.+.+..++++..++++.+.+.|++.|++. +..| |+ .+++
T Consensus 241 -----~~g~~~s~~~A~~~l~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~ 313 (398)
T PRK07504 241 -----HTGPSLSPFNAWTLLK--GLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLV 313 (398)
T ss_pred -----HhCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEE
Confidence 1122335566676665 567788999999999999999999998875 3322 21 5688
Q ss_pred EEEecC
Q 010125 425 CFRVSP 430 (517)
Q Consensus 425 ~f~~~~ 430 (517)
+|.+..
T Consensus 314 s~~~~~ 319 (398)
T PRK07504 314 AFELKG 319 (398)
T ss_pred EEEeCC
Confidence 998854
No 175
>PRK09148 aminotransferase; Validated
Probab=99.79 E-value=1e-16 Score=166.51 Aligned_cols=333 Identities=11% Similarity=0.050 Sum_probs=206.2
Q ss_pred HHHHHHHhccc-ccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 109 FLGEMLSSGFN-IVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 109 ~~~~~l~~~~n-~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
.+.+.+...++ .....|....+..++.+.+++|+.+.+|.+-.. ....++|+|+++++..++.+..+
T Consensus 47 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~l~~-------- 114 (405)
T PRK09148 47 HIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNP----DTQVVATLGSKEGFANMAQAITA-------- 114 (405)
T ss_pred HHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEcCChHHHHHHHHHHhcC--------
Confidence 33333444443 233466666678899999999999887864221 01589999999998776655432
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD 267 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id 267 (517)
+++.|++.+++|..+..++...|+ +++.||++.++.+ +++++++++.... .+.+|+.+.++|+||.+-
T Consensus 115 ---~gd~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~---~~~l~~~~~~~~~---~~~~v~l~~P~NPtG~~~ 182 (405)
T PRK09148 115 ---PGDVILCPNPSYPIHAFGFIMAGG---VIRSVPAEPDEEF---FPALERAVRHSIP---KPIALIVNYPSNPTAYVA 182 (405)
T ss_pred ---CCCEEEEcCCCCcccHHHHHhcCC---EEEEEeCCCCCCC---ccCHHHHHhhccc---cceEEEEeCCCCCCCcCC
Confidence 556788888999999888899999 9999999754333 4455555543211 245888899999999997
Q ss_pred Ch---hHHHHHHHHhCCeEEcccccccccccCcccccc--ccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhh
Q 010125 268 PL---KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF--IDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSL 341 (517)
Q Consensus 268 pl---~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~--~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~ 341 (517)
+. ++|+++|++||+++++|++|+.+.......... +.+......+..+++|.++ ....+|+++. ++... +.+
T Consensus 183 s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i-~~l 260 (405)
T PRK09148 183 DLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLI-AAL 260 (405)
T ss_pred CHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHH-HHH
Confidence 65 688899999999999999997654321111111 1111122245678999998 4477888875 33332 222
Q ss_pred cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 010125 342 STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC 419 (517)
Q Consensus 342 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~ 419 (517)
.....++.. ....+...++...+ +.+.+++..+...++++++.+.|++. ++.+. +|
T Consensus 261 ~~~~~~~~~--------------------~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~p 318 (405)
T PRK09148 261 TRVKSYLDY--------------------GAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP-PP 318 (405)
T ss_pred HHHHHHhcc--------------------CCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC-CC
Confidence 211111110 00122223333333 23455666777788888899999886 66543 45
Q ss_pred CeeEE-EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHH
Q 010125 420 HFAVV-CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEKR 495 (517)
Q Consensus 420 ~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~ 495 (517)
+.+++ .+++++. . . +....++.+.+. +.|+...++..+. +..++|+++. .+.+
T Consensus 319 ~~g~f~~~~l~~~-~---------------~----~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~---~~~~ 375 (405)
T PRK09148 319 AASMFAWAPIPEA-F---------------R----HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV---ENEQ 375 (405)
T ss_pred CeeEEEEEECCCc-c---------------C----CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec---CCHH
Confidence 44544 4444321 0 0 000134555544 5677665554442 2469999984 2567
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010125 496 HVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 496 di~~l~~~l~~~~~~l~ 512 (517)
.+.+.++.|.++..++.
T Consensus 376 ~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 376 RIRQAARNIKRFLSSAD 392 (405)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 88888888877765543
No 176
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=4.6e-17 Score=168.96 Aligned_cols=241 Identities=15% Similarity=0.153 Sum_probs=158.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
.+|...++|+. ++++.|.. ..++|++||+|+.+++.+... +++.|+++...|.+..
T Consensus 62 ~~p~~~~le~~----lA~l~g~~---------~av~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t~ 117 (433)
T PRK08134 62 SNPTVAVLEER----VAALEGGV---------GAIATASGQAALHLAIATLMG-----------AGSHIVASSALYGGSH 117 (433)
T ss_pred cChHHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHHH
Confidence 45666666655 55666654 358999999999888765421 5567888888887665
Q ss_pred HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KAA----QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 kaa----~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
... ...|+ +++.++++ |+++|+++|+++++ +|++.++++++|.+.|+++|+++|++||++
T Consensus 118 ~~~~~~l~~~Gi---~v~~vd~~-------d~~~l~~~i~~~Tk------lV~~e~~~np~g~v~Di~~I~~la~~~gi~ 181 (433)
T PRK08134 118 NLLHYTLRRFGI---ETTFVKPG-------DIDGWRAAIRPNTR------LLFGETLGNPGLEVLDIPTVAAIAHEAGVP 181 (433)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHhcCCCCe------EEEEECCCcccCcccCHHHHHHHHHHcCCE
Confidence 543 44688 88888753 79999999987664 788888999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc-ceEEEEeCchhH-Hh--hh-cCCccccCCccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD-CCCLWVKDPRAL-VS--SL-STNPEYLKNKATESMQ 357 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~~~~~~~-~~--~~-~~~~~yl~~~~~~~~~ 357 (517)
++||++|+.+....+ . . -++|.+++|.|||++.+-. .|.+++...... .. .+ ...+............
T Consensus 182 livD~t~a~~~~~~p-l-~-----~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 254 (433)
T PRK08134 182 LLVDSTFTTPYLLRP-F-E-----HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAE 254 (433)
T ss_pred EEEECCCcccccCCc-h-h-----cCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhh
Confidence 999999987765432 1 1 1799999999999986632 455555322110 00 00 0001000000000000
Q ss_pred cccCCC--------ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 358 VVDYKD--------WQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 358 ~~~~~~--------~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
...... .....+........|..++ |.+.+..++++..++|..+.+.|+++|.++-+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V 319 (433)
T PRK08134 255 ESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVARV 319 (433)
T ss_pred ccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 000000 0001122234455565554 67789999999999999999999999887543
No 177
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.79 E-value=3.3e-17 Score=169.12 Aligned_cols=349 Identities=15% Similarity=0.100 Sum_probs=202.8
Q ss_pred cceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLT 175 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~ 175 (517)
|.++...+.+ .++..++..+.. .....|..+++..++|+++.+++ |.+ .+++|+|||+|+..++.
T Consensus 22 ~iDlltds~t-~ams~~~~~a~~-~gd~~Y~~~~g~~~Leeaia~~~----g~~---------~vv~t~~Gt~Al~la~~ 86 (431)
T cd00617 22 YIDLLTDSGT-GAMSDYQWAAMM-LGDEAYAGSKSFYDLEDAVQDLF----GFK---------HIIPTHQGRGAENILFS 86 (431)
T ss_pred CCCCCCCCCc-HHHHHHHHHHHH-hCCCccCCCCCHHHHHHHHHHHH----CCC---------eEEEcCCHHHHHHHHHH
Confidence 5566543333 222222333332 33346889999999998877665 443 57999999999998877
Q ss_pred HHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHhHhc
Q 010125 176 AARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSS--------SYGLSPDSLMAQINSDVEV 247 (517)
Q Consensus 176 ~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~--------~~~~d~~~Le~~i~~~~~~ 247 (517)
+..+ ++++| ++...+.+...++...|. .++.+++++.. .|.+|+++|+++|++...
T Consensus 87 al~~-----------pGD~V-~~~~~f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~- 150 (431)
T cd00617 87 ILLK-----------PGRTV-PSNMHFDTTRGHIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA- 150 (431)
T ss_pred HhCC-----------CCCEE-ccCCcccchHHHHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCcccC-
Confidence 6533 45556 454444456667788899 99999997532 245999999999986411
Q ss_pred CCcceEEEeeccCCcc-cccc---ChhHHHHHHHHhCCeEEcccccccccc-cC----cccccc-c-----cCCCCCCee
Q 010125 248 GLIPLFLCATIGTTAI-TAVD---PLKPLCDVAKQFGIWVHVDAAYAGSAC-IC----PEFRHF-I-----DGVEGADSF 312 (517)
Q Consensus 248 g~~p~~vv~t~gtt~~-G~id---pl~eI~~i~~~~gi~lhvDaA~g~~~~-~~----~~~~~~-~-----~g~~~aDsi 312 (517)
..+.+|+++.++|++ |.+- ++++|+++|++||+|+|.|+|+..... +. +.+... + .-...+|++
T Consensus 151 -~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~ 229 (431)
T cd00617 151 -ENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGC 229 (431)
T ss_pred -CCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEE
Confidence 123478888888887 7764 567889999999999999999754311 11 111110 0 112479999
Q ss_pred eeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchH-HHHHHHHhcHHHHHH
Q 010125 313 SLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLK-LWFVIRNYGVANLRH 391 (517)
Q Consensus 313 ~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~-~~~~l~~~g~~g~~~ 391 (517)
++++||.+.+|. .|++.+++++...+.-... +... .+...++...+... +..+++.. .+ .+
T Consensus 230 ~mS~~K~~~~~~-GG~i~~~d~~l~~~~~~~~--~~~~------------~~~~~gG~~~r~~~A~A~gL~e~-~~--~~ 291 (431)
T cd00617 230 TMSAKKDGLVNI-GGFLALRDDELYEEARQRV--VLYE------------GFVTYGGMAGRDMEALAQGLREA-VE--ED 291 (431)
T ss_pred EEEeecCCCCcc-ceEEEeCcHHHHHHHHHhc--cccC------------CccccccccHHHHHHHHHHHHhc-cc--HH
Confidence 999999998875 5567777654443321100 0000 00111121111111 11122211 11 24
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcE
Q 010125 392 FLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKA 470 (517)
Q Consensus 392 ~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~ 470 (517)
.+++..+.++++.+.|.+. |+.++.|.....+......-. + ....+. -...++..+|. +.|+.
T Consensus 292 ~l~~~~~~r~~l~~~L~~~-G~~v~~P~Ggh~v~~d~~~~~----------~---~~~~~~--~~~~~la~~L~~e~gV~ 355 (431)
T cd00617 292 YLRHRVEQVRYLGDRLDEA-GVPIVEPAGGHAVFIDAREFL----------P---HIPQEQ--FPAQALAAELYLEAGVR 355 (431)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCCccCCCcceEEEEEhHHhc----------C---CCCccc--CcHHHHHHHHHHHcCee
Confidence 4566666789999999987 888774433333333332100 0 000000 01234443333 44554
Q ss_pred EEeeeeE-------C------CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 471 YMTHAVL-------G------GIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 471 ~~~~~~~-------~------g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.+....+ . .-..+|+.+--.--|.++++.+.+.|..+.++
T Consensus 356 ~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 356 AVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred EEeecceecccCCCCCcccCCccceeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 3321110 1 13579999854445778999999999988765
No 178
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=1.6e-17 Score=169.48 Aligned_cols=283 Identities=12% Similarity=0.038 Sum_probs=184.9
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCC-eEEEeCCCCchHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISK-LIVYGSDQTHCALQKAA 209 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~-~~v~~s~~~H~s~~kaa 209 (517)
..++.+ .+++.+|++++ .+++|+|+++++..++.+... ++ +.|++.++++..+...+
T Consensus 62 ~~~Lr~----aia~~~~~~~~-------~I~it~Gs~~~i~~~~~~~~~-----------~g~d~vlv~~P~y~~y~~~~ 119 (354)
T PRK04635 62 PPELIN----AYSAYAGVAPE-------QILTSRGADEAIELLIRAFCE-----------PGQDSIACFGPTYGMYAISA 119 (354)
T ss_pred HHHHHH----HHHHHhCcCHH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHH
Confidence 445554 45556788765 789999999988776654422 33 66888889998888899
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh-CCeEEcccc
Q 010125 210 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF-GIWVHVDAA 288 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~-gi~lhvDaA 288 (517)
+..|+ +++.||++. ++.+|++.+++ + ++ +.+|+++.++|+||.+-|.+++.++++.. ++++++|++
T Consensus 120 ~~~g~---~v~~v~~~~--~~~~~~~~l~~-~-~~------~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDea 186 (354)
T PRK04635 120 ETFNV---GVKALPLTA--DYQLPLDYIEQ-L-DG------AKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEA 186 (354)
T ss_pred HHcCC---EEEEEecCC--CCCCCHHHHHh-c-cC------CCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCc
Confidence 99999 999999974 47899998873 3 22 23788889999999999999999999874 799999999
Q ss_pred cccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCccc
Q 010125 289 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQI 366 (517)
Q Consensus 289 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~ 366 (517)
|..+... ...........+. .+.-+++|+++ .+..+|+++.. ++.. +.+.. ..+| .
T Consensus 187 y~~~~~~-~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~-~~~~-~~l~~~~~~~-----------------~- 244 (354)
T PRK04635 187 YIEFCPE-YSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLAN-EELI-EILMRVIAPY-----------------P- 244 (354)
T ss_pred hHhhccC-cchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCC-HHHH-HHHHhhcCCC-----------------C-
Confidence 9654311 1111111111111 45667999997 55678888764 3322 22211 1111 0
Q ss_pred cCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhh
Q 010125 367 TLSRRFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYV 443 (517)
Q Consensus 367 ~~sr~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 443 (517)
.......+++..+ |.+.+++.+++..+.++++.+.|++.+++++. ++..+.+.+++. .
T Consensus 245 -----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~-~------------ 305 (354)
T PRK04635 245 -----VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFD-D------------ 305 (354)
T ss_pred -----CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECC-C------------
Confidence 0111222233333 33445666777778889999999988767765 555555555443 1
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 444 NCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 444 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
..++.+.|.+.|+............++|++++ +.+|+++++++|++
T Consensus 306 -------------~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~~----~~e~~~~l~~al~~ 351 (354)
T PRK04635 306 -------------VDAVFKALWDAGIVARAYKDPRLANCIRFSFS----NRAETDKLIGLIRN 351 (354)
T ss_pred -------------HHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC----CHHHHHHHHHHHHH
Confidence 13455666677865433222223468999984 57799999999875
No 179
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=7.6e-17 Score=165.55 Aligned_cols=288 Identities=13% Similarity=0.078 Sum_probs=188.4
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
.+++++++.+|++++ ..++|+|+++++..++.+..+ +++.|++..++|..+...++..|+
T Consensus 75 ~lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~vli~~P~y~~~~~~~~~~g~-- 134 (371)
T PRK05166 75 ALREAIAARTGVPAD-------RIILGNGSEDLIAVICRAVLR-----------PGDRVVTLYPSFPLHEDYPTMMGA-- 134 (371)
T ss_pred HHHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 345666777787654 689999999887655544321 566788888999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHH--hCCeEEcccccccccc
Q 010125 217 KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSAC 294 (517)
Q Consensus 217 ~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~--~gi~lhvDaA~g~~~~ 294 (517)
+++.+|++. ++.+|+++|++++++.++ +|+++.++|+||.+-+.+++.++++. +++++++|++|+.+..
T Consensus 135 -~~~~v~~~~--~~~~~~~~l~~~~~~~~~------~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~ 205 (371)
T PRK05166 135 -RVERVTVTP--DLGFDLDALCAAVARAPR------MLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA 205 (371)
T ss_pred -eEEEeecCC--CCCCCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC
Confidence 999999875 468999999998876443 67789999999999988777777664 4899999999976552
Q ss_pred cCccccccccCCC-C--CCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCC
Q 010125 295 ICPEFRHFIDGVE-G--ADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSR 370 (517)
Q Consensus 295 ~~~~~~~~~~g~~-~--aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 370 (517)
.......+..+. . --.+..++.|.++ .....|++++.++... +.+.....+. .
T Consensus 206 -~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~-~~~~~~~~~~----------------~----- 262 (371)
T PRK05166 206 -GDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELV-GLLDRVRTPF----------------N----- 262 (371)
T ss_pred -CcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHH-HHHHHhccCC----------------C-----
Confidence 111111111111 1 1245677999997 6678898887665433 2221110000 0
Q ss_pred CCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccch
Q 010125 371 RFRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSE 449 (517)
Q Consensus 371 ~~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~ 449 (517)
...+...+++..+ ..+.+++.++...+..+++.+.|++. ++++. ++..+.+.++....
T Consensus 263 -~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~~------------------ 321 (371)
T PRK05166 263 -VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARRP------------------ 321 (371)
T ss_pred -CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCCC------------------
Confidence 0122222233333 23456677777888888999999887 77653 55555554443211
Q ss_pred HHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 450 EEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 450 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
..++.+.|.++|+...+........++|++++ +.++.+++.+.|+++.
T Consensus 322 -------~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 322 -------ASAVAEALLRQGVIVKPWKQPGFETFIRVSIG----SPEENDHFVAALDKVL 369 (371)
T ss_pred -------HHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 24567777778875544433334679999985 3556777777776653
No 180
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=1.4e-16 Score=163.54 Aligned_cols=316 Identities=13% Similarity=0.025 Sum_probs=205.3
Q ss_pred hHHHHHHHHHhcccc---cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHH
Q 010125 106 IAGFLGEMLSSGFNI---VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVL 182 (517)
Q Consensus 106 ~~~~~~~~l~~~~n~---~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~ 182 (517)
++..+.+.+...+.. ....|. .++...+.+.+++|+.+..|++-+ ...+++|+|+++++..++.+..+
T Consensus 40 ~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~-----~~~I~it~G~~~~l~~~~~~~~~--- 110 (368)
T PRK03317 40 PSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLT-----VENVWAANGSNEILQQLLQAFGG--- 110 (368)
T ss_pred CCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCC-----hhhEEECCCHHHHHHHHHHHhcC---
Confidence 334455555444321 223453 456788999999999998876432 13789999999988776665532
Q ss_pred HHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCc
Q 010125 183 NKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA 262 (517)
Q Consensus 183 ~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~ 262 (517)
+++.|++..++|..+..+++..|+ +++.+|.+. ++.+|+++|++++++.. +.+|+++.++++
T Consensus 111 --------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NP 172 (368)
T PRK03317 111 --------PGRTALGFVPSYSMHPIIARGTHT---EWVEGPRAA--DFTLDVDAAVAAIAEHR-----PDVVFLTSPNNP 172 (368)
T ss_pred --------CCCEEEEeCCChHHHHHHHHhcCC---eeEEcccCC--CCCCCHHHHHHHHhccC-----CCEEEEeCCCCC
Confidence 556688888999999999998888 888887653 57899999999987432 226777889999
Q ss_pred cccccChhHHHHHHHHhCCeEEcccccccccccC-ccccccccCCCCCCe-eeeccccccC-CCCcceEEEEeCchhHHh
Q 010125 263 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC-PEFRHFIDGVEGADS-FSLNAHKWFF-ATLDCCCLWVKDPRALVS 339 (517)
Q Consensus 263 ~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~-~~~~~~~~g~~~aDs-i~~~~hK~l~-~p~~~g~l~~~~~~~~~~ 339 (517)
||.+-+.+++.++|+.+++++++|.+|+.+.... +....... . .-+. +..++.|.++ ....+|+++.. +.. .+
T Consensus 173 tG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~-~-~~~~i~~~SfSK~~g~~GlRiG~~~~~-~~~-~~ 248 (368)
T PRK03317 173 TGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLLP-E-YPRLVVSRTMSKAFAFAGGRLGYLAAA-PAV-VD 248 (368)
T ss_pred CCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHHH-h-CCCEEEEEechhhhccchhhhhhhhCC-HHH-HH
Confidence 9999999999999999999999999998653211 01111111 1 1243 4458999997 45667888763 322 22
Q ss_pred hhcC-CccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 340 SLST-NPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 340 ~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
.+.. ...| . ..++...++...+. .+.+.+.+++..+.++++.+.|++. ++++.
T Consensus 249 ~l~~~~~~~-----------------~------~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~- 303 (368)
T PRK03317 249 ALRLVRLPY-----------------H------LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVA- 303 (368)
T ss_pred HHHhcCCCC-----------------C------CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeC-
Confidence 3321 1001 0 12233333333331 2345556667777888888888886 77764
Q ss_pred CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHH
Q 010125 418 PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 418 ~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 497 (517)
++..+++.|...+. ...+.+.|.++|+.. .+. ....++|+++. +.+++
T Consensus 304 ~~~~~~~~~~~~~~-------------------------~~~~~~~l~~~Gv~v-~~~--~~~~~iRi~~~----~~~~~ 351 (368)
T PRK03317 304 PSDANFVLFGRFAD-------------------------RHAVWQGLLDRGVLI-RDV--GIPGWLRVTIG----TPEEN 351 (368)
T ss_pred CCCCcEEEEeccCC-------------------------HHHHHHHHHHCCEEE-EeC--CCCCeEEEecC----CHHHH
Confidence 55666655522111 245667777788654 332 22468999974 45689
Q ss_pred HHHHHHHHHHHH
Q 010125 498 VVAWTVVQQHLE 509 (517)
Q Consensus 498 ~~l~~~l~~~~~ 509 (517)
++++++|+++.+
T Consensus 352 ~~~~~~l~~~~~ 363 (368)
T PRK03317 352 DAFLAALAEVLA 363 (368)
T ss_pred HHHHHHHHHHHH
Confidence 999999988754
No 181
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.79 E-value=2.9e-17 Score=168.33 Aligned_cols=212 Identities=16% Similarity=0.198 Sum_probs=150.4
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH----HHHH
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK----AAQI 211 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k----aa~~ 211 (517)
+++.+.+++++|.+ ..+++++|+.|+..++. . ++ +++.|++++..|.+..+ .+..
T Consensus 50 ~~le~~la~l~g~~---------~~l~~~sG~~al~~~l~-l----l~-------~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 50 TALESLLAKLDKAD---------RAFAFSSGMAALDVITR-L----LN-------NGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred HHHHHHHHHHhCCC---------cEEEECCHHHHHHHHHH-H----hC-------CCCEEEEcCCCchHHHHHHHHHHHH
Confidence 34556777888874 35777777766644332 2 11 56678888888877654 3456
Q ss_pred cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccc
Q 010125 212 VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 291 (517)
Q Consensus 212 ~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~ 291 (517)
.|+ +++.++.+ |+++++++++++++ +|+++.+++++|.+.|+++|+++|++||++++||++|+.
T Consensus 109 ~G~---~v~~vd~~-------d~~~le~~i~~~tk------lv~le~psnptg~v~dl~~I~~la~~~g~~vivD~a~~~ 172 (378)
T TIGR01329 109 SGV---VVVHVDTT-------DLDKVKAALGPKTK------LVLLESPTNPLQKIVDIRKISEMAHAQNALVVVDNTMMS 172 (378)
T ss_pred cCc---EEEEeCCC-------CHHHHHHhcCcCce------EEEEECCCCCCCeeecHHHHHHHHHHcCCEEEEECCCcc
Confidence 788 88888752 78999999875443 899999999999999999999999999999999999966
Q ss_pred ccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCC
Q 010125 292 SACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLS 369 (517)
Q Consensus 292 ~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 369 (517)
+....+ .. . ++|.++.++|||+++|.+ .|+++++++....+.. .+... .+
T Consensus 173 ~~~~~~-l~-----~-g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~----~~~~~-----------------~G 224 (378)
T TIGR01329 173 PLLCNP-LE-----L-GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVY----FLQNS-----------------TG 224 (378)
T ss_pred cccCCh-hh-----c-CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHH----HHHHh-----------------cC
Confidence 543221 11 1 789999999999998866 8888887765322211 01000 01
Q ss_pred CCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 370 RRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 370 r~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
........|..++ +.+.+..++++...++..+.+.|++.|.+.
T Consensus 225 ~~~~~~~a~l~~~--~l~tl~~R~e~~~~na~~la~~L~~~~~v~ 267 (378)
T TIGR01329 225 SGLAPFDCWLLLR--GIKTLAIRIEKQQENARAIAMFLSTHPRVK 267 (378)
T ss_pred CcCCHHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 1112334454443 567788999999999999999999888763
No 182
>PRK07908 hypothetical protein; Provisional
Probab=99.79 E-value=7e-17 Score=164.44 Aligned_cols=305 Identities=15% Similarity=0.111 Sum_probs=194.5
Q ss_pred CChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 104 GSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 104 ~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
..+|..+.+.+...++. ...|....+...+.+ ++++.+|.+++ .+++|+|+++++..++. . .
T Consensus 34 ~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~----aia~~~~~~~~-------~I~it~Ga~~al~~~~~-l-~---- 95 (349)
T PRK07908 34 DTPPEWLRERLAARLGD-LAAYPSTEDERRARA----AVAARHGRTPD-------EVLLLAGAAEGFALLAR-L-R---- 95 (349)
T ss_pred CCCCHHHHHHHHHHhhH-hhcCCCccchHHHHH----HHHHHhCcChh-------hEEECCCHHHHHHHHHh-c-C----
Confidence 44555566666665543 234544345555554 45555677665 78999999999865554 1 1
Q ss_pred HhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcc
Q 010125 184 KIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAI 263 (517)
Q Consensus 184 ~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~ 263 (517)
++.++ +..+++......++..|+ +++.+|++. ++.+|+++++ +. +.+++++.++|+|
T Consensus 96 -------~~~vi-v~~P~y~~~~~~~~~~G~---~i~~v~~~~--~~~~d~~~l~----~~------~~~i~l~np~NPT 152 (349)
T PRK07908 96 -------PRRAA-VVHPSFTEPEAALRAAGI---PVHRVVLDP--PFRLDPAAVP----DD------ADLVVIGNPTNPT 152 (349)
T ss_pred -------CCeEE-EeCCCChHHHHHHHHcCC---EEEeeccCc--ccCcChhHhc----cC------CCEEEEcCCCCCC
Confidence 33344 456888888888999999 999999975 3788988653 22 2377789999999
Q ss_pred ccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeee-ccccccC-CCCcceEEEEeCchhHHhhh
Q 010125 264 TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSL-NAHKWFF-ATLDCCCLWVKDPRALVSSL 341 (517)
Q Consensus 264 G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~-~~hK~l~-~p~~~g~l~~~~~~~~~~~~ 341 (517)
|.+-+.++|.++|++ +.++++|++|+-+. .. ....... ...-+++.+ +++|.++ .+..+|+++.. +.... .+
T Consensus 153 G~~~~~~~l~~l~~~-~~~iIvDe~y~~~~-~~-~~~~l~~-~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~-~~ 226 (349)
T PRK07908 153 SVLHPAEQLLALRRP-GRILVVDEAFADAV-PG-EPESLAG-DDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLA-RL 226 (349)
T ss_pred CCCcCHHHHHHHHhc-CCEEEEECcchhhc-cC-Ccccccc-ccCCCEEEEeecccccCCccceeeeeecC-HHHHH-HH
Confidence 999999999999974 88999999997542 11 1111111 122345665 7999887 56778999864 33322 22
Q ss_pred cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 342 STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 342 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
...... +. ...+...+....+ +.+.++++.++..++++++.+.|++. ++++..+
T Consensus 227 ~~~~~~----------------~~------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p 283 (349)
T PRK07908 227 TRGRAH----------------WP------VGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDP 283 (349)
T ss_pred HhcCCC----------------CC------ccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccC
Confidence 111000 00 0111111111111 23456677788888899999999887 7887755
Q ss_pred CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHH
Q 010125 419 CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEKRH 496 (517)
Q Consensus 419 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~d 496 (517)
+..+.+++++.. ...+.+.|.++|+...++..+. +..++|+++. ++++
T Consensus 284 ~~g~~~~~~~~~--------------------------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~----~~~~ 333 (349)
T PRK07908 284 AAAPFVLVRVPD--------------------------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR----PRAE 333 (349)
T ss_pred CCceEEEEECCc--------------------------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC----CCcc
Confidence 666666665532 1355666767787665554443 3579999984 4569
Q ss_pred HHHHHHHHHHHH
Q 010125 497 VVVAWTVVQQHL 508 (517)
Q Consensus 497 i~~l~~~l~~~~ 508 (517)
+++++++|+++.
T Consensus 334 ~~~l~~al~~~~ 345 (349)
T PRK07908 334 VPVLVQALAEIL 345 (349)
T ss_pred HHHHHHHHHHHH
Confidence 999999988764
No 183
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.78 E-value=1.1e-16 Score=161.99 Aligned_cols=331 Identities=17% Similarity=0.095 Sum_probs=192.6
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcc
Q 010125 72 SMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKS 151 (517)
Q Consensus 72 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~ 151 (517)
..+..++.+++.+..|-...- -.|+|.-.. +.......+.+... + +...+.+++.+.+++++|.+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~-~~ylgl~~~-~~~~~~~~~~~~~~----~-------g~~~~~~~Le~~lA~~~g~~~e 72 (346)
T TIGR03576 6 RREKALEIIREKISRGGRDSL-YDLTGLAGG-FKIDEEDLELLETY----V-------GPAIFEEKVQELGREHLGGPEE 72 (346)
T ss_pred HHHHHHHHHHHHHhccCCccc-cccccCCCC-hhHHHHHHHHHHHh----c-------CCHHHHHHHHHHHHHHcCCCcc
Confidence 356778888887766532211 146665432 22222222333222 1 3457888888999999999765
Q ss_pred cccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEe---CCCCchHHHHHHHHcCCCCCCEEEEecCCCC
Q 010125 152 FLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYG---SDQTHCALQKAAQIVGIDVKNFRAIKTTKSS 228 (517)
Q Consensus 152 ~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~---s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~ 228 (517)
..++++||++||..++.+..+ +++.|++ +.++|.++..++++.|. +++.+
T Consensus 73 -------~ilv~~gg~~a~~~~~~al~~-----------~gd~Vli~~~d~p~~~s~~~~~~l~ga---~~~~~------ 125 (346)
T TIGR03576 73 -------KILVFNRTSSAILATILALEP-----------PGRKVVHYLPEKPAHPSIPRSCKLAGA---EYFES------ 125 (346)
T ss_pred -------eEEEECCHHHHHHHHHHHhCC-----------CCCEEEECCCCCCCchhHHHHHHHcCC---EEecc------
Confidence 689999999999887766533 4445553 25799999999999998 55322
Q ss_pred CcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc---cChhHHHHHHHHhCCeEEcccccccccccCccccccccC
Q 010125 229 SYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDG 305 (517)
Q Consensus 229 ~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g 305 (517)
.++++|+. . + .+.+|+++ |++++|.+ .||++|+++|++||+|++||.||+.+............
T Consensus 126 ---~~l~~l~~-~-~------~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~~~~~- 192 (346)
T TIGR03576 126 ---DELSELKK-I-D------GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQPPALD- 192 (346)
T ss_pred ---CCHHHHhh-C-c------CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCCCHHH-
Confidence 13444322 1 1 12355555 56888988 89999999999999999999999876532111111111
Q ss_pred CCCCCeeeeccccccCCCCcceEEEEeCchhHHhhh-cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh
Q 010125 306 VEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSL-STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY 384 (517)
Q Consensus 306 ~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~ 384 (517)
.++|.++.+++|++.++ ..|+++.+. ... +.+ ....+|... ..+..+++++..+
T Consensus 193 -~~~divv~s~SKalaG~-r~G~v~~~~-~li-~~l~~~~~~~~~s---------------------~~~~~~~aa~~aL 247 (346)
T TIGR03576 193 -LGADLVVTSTDKLMDGP-RGGLLAGRK-ELV-DKIKSVGEQFGLE---------------------AQAPLLAAVVRAL 247 (346)
T ss_pred -cCCcEEEeccchhcccc-ceEEEEeCH-HHH-HHHHHhhcCcccC---------------------ccHHHHHHHHHHH
Confidence 14688889999977444 367666543 332 222 222222210 0122233333333
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH
Q 010125 385 GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI 464 (517)
Q Consensus 385 g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 464 (517)
.....+.+.+...++++++.+.++. +.+. ++..+.+.+++.+. + ......+.|
T Consensus 248 ~~~~~~~~~~~l~~r~~~~~~~l~~---~~~~-~~~~~f~~~~~~~~----------------------~-~~~~~~~ll 300 (346)
T TIGR03576 248 EEFELSRIRDAFKRKEEVYLRLFDK---LNVE-RTPTGFVIKGVEEE----------------------K-LIEIGLDLL 300 (346)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHh---CCCC-cCCCeEEEEeCCCC----------------------C-HHHHHHHHH
Confidence 2112244455666677777777764 3333 33445544444321 0 012334555
Q ss_pred HhcCcEEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 465 NASGKAYMTHAVLG-GIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 465 ~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
.+.|++..+...+. ...++|+|++.+..+..+.++++++|++.
T Consensus 301 ~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 301 RNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred HhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 56787766654443 25699999975332223789999888764
No 184
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.78 E-value=6.2e-17 Score=165.54 Aligned_cols=320 Identities=14% Similarity=0.082 Sum_probs=198.7
Q ss_pred HHHHhccccccccccc-ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCC
Q 010125 112 EMLSSGFNIVGFNWIS-SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI 190 (517)
Q Consensus 112 ~~l~~~~n~~~~~~~~-sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~ 190 (517)
+.+...+... .+.. ++...++|+++.+|+ |.+ .++.+++||.|+..|+.+.. ..
T Consensus 9 ~~v~~~l~s~--~~~~~g~~~~~fE~~~a~~~----g~~---------~~~~~~sgt~Al~~al~~l~--------~~-- 63 (363)
T PF01041_consen 9 DAVLEVLRSG--WLSTYGPYVEEFEKEFAEYF----GVK---------YAVAVSSGTSALHLALRALG--------LG-- 63 (363)
T ss_dssp HHHHHHHHHT--CCSSSSHHHHHHHHHHHHHH----TSS---------EEEEESSHHHHHHHHHHHTT--------GG--
T ss_pred HHHHHHHHhC--CccCCCHHHHHHHHHHHHHh----CCC---------eEEEeCChhHHHHHHHHhcC--------CC--
Confidence 3444444333 2333 778888887765554 433 57999999999998887742 22
Q ss_pred CCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChh
Q 010125 191 SKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLK 270 (517)
Q Consensus 191 ~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~ 270 (517)
+++.|+++..+..+...++..+|+ .++.++++++ ++.||+++|+++|++.++ +|++++ ..|...+++
T Consensus 64 ~gdeVi~p~~t~~~~~~ai~~~G~---~pv~~Di~~~-~~~id~~~~~~~i~~~t~------ai~~~h---~~G~~~d~~ 130 (363)
T PF01041_consen 64 PGDEVIVPAYTFPATASAILWAGA---EPVFVDIDPE-TLNIDPEALEKAITPKTK------AILVVH---LFGNPADMD 130 (363)
T ss_dssp TTSEEEEESSS-THHHHHHHHTT----EEEEE-BETT-TSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HH
T ss_pred cCceEecCCCcchHHHHHHHHhcc---EEEEEeccCC-cCCcCHHHHHHHhccCcc------EEEEec---CCCCcccHH
Confidence 677899999999999999999999 9999999964 799999999999998875 565554 567778999
Q ss_pred HHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeec--cccccCCCCcceEEEEeCchhHHhhhcCCcccc
Q 010125 271 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLN--AHKWFFATLDCCCLWVKDPRALVSSLSTNPEYL 348 (517)
Q Consensus 271 eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~--~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl 348 (517)
+|.++|++||++++.|+|++.+...- ...-|- ..|.-++| ..|.+.+. ..|++++++++...+.-.....-.
T Consensus 131 ~i~~~~~~~~i~lIeD~a~a~g~~~~----g~~~G~-~gd~~~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~ 204 (363)
T PF01041_consen 131 AIRAIARKHGIPLIEDAAQAFGARYK----GRPVGS-FGDIAIFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGR 204 (363)
T ss_dssp HHHHHHHHTT-EEEEE-TTTTT-EET----TEETTS-SSSEEEEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTE
T ss_pred HHHHHHHHcCCcEEEccccccCceeC----CEeccC-CCCceEecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCc
Confidence 99999999999999999998776432 221121 34555555 56988553 568888888765433321110000
Q ss_pred CCccccccccccCCCcccc--CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC------
Q 010125 349 KNKATESMQVVDYKDWQIT--LSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCH------ 420 (517)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~--~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~------ 420 (517)
... ....+.-+ .+..++.-.+-+++-....+.+.+++++..++++++.+.|...+++..+..+.
T Consensus 205 ~~~--------~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~ 276 (363)
T PF01041_consen 205 SRD--------AFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSS 276 (363)
T ss_dssp ETS--------ECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBC
T ss_pred Ccc--------ccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccc
Confidence 000 00000101 22333444444455444567789999999999999999999999987764322
Q ss_pred eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeee--E------CC-------------
Q 010125 421 FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAV--L------GG------------- 479 (517)
Q Consensus 421 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~------~g------------- 479 (517)
...+.+++.+... ....++.+.|.++|+-...... + ..
T Consensus 277 ~~~f~i~~~~~~~---------------------~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae 335 (363)
T PF01041_consen 277 YYRFPIRLPDEAL---------------------ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAE 335 (363)
T ss_dssp ESSEEEEETCCGC---------------------STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHH
T ss_pred ccccccccccccc---------------------chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHH
Confidence 1234455543210 1135677888888874322110 0 00
Q ss_pred ---EeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 480 ---IYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 480 ---~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
...|.+-+ ++..+++|+++++++|+
T Consensus 336 ~l~~r~l~LP~-~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 336 RLSQRLLSLPI-HPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp HHHHHEEEEEH-STTSCHHHHHHHHHHHH
T ss_pred HHHhCeEECcC-CCCCCHHHHHHHhhccC
Confidence 12455554 78889999999998875
No 185
>PLN02509 cystathionine beta-lyase
Probab=99.78 E-value=4.5e-17 Score=169.47 Aligned_cols=215 Identities=16% Similarity=0.218 Sum_probs=152.9
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHH----H
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKA----A 209 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ka----a 209 (517)
..+++.++++++.|.+ ..+++++|+.|+ .++.... + +++.|++++..|.+..+. +
T Consensus 134 t~~aLE~~lA~leg~e---------~ai~~~SG~aAi-~~il~ll----~-------~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKAD---------RAFCFTSGMAAL-SAVTHLI----K-------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCC---------EEEEeCcHHHHH-HHHHHHh----C-------CCCEEEEcCCchhhHHHHHHHHH
Confidence 3455667788877643 356777777654 3333221 1 566788898999876643 4
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccc
Q 010125 210 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
...|+ +++.++. .|+++|+++|+++++ +|+++.+++++|.+.|+++|+++|++||++++||+||
T Consensus 193 ~~~G~---~v~~vd~-------~d~e~l~~ai~~~Tk------lV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~ 256 (464)
T PLN02509 193 PRSGV---VVKRVNT-------TNLDEVAAAIGPQTK------LVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSI 256 (464)
T ss_pred HHCCe---EEEEeCC-------CCHHHHHHhCCcCCe------EEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 45677 7777753 368899999876543 8899999999999999999999999999999999999
Q ss_pred ccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccccCCCcccc
Q 010125 290 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQIT 367 (517)
Q Consensus 290 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 367 (517)
+.+....+ . -.++|.+++++|||++++.+ +|+++++++....+.. .+...
T Consensus 257 a~~~~~~p-l------~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~-----~~~~~---------------- 308 (464)
T PLN02509 257 MSPVLSRP-L------ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVY-----FLQNS---------------- 308 (464)
T ss_pred cccccCCh-h------hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHH-----HHHHh----------------
Confidence 77654322 1 12799999999999998766 7888776654322111 01000
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010125 368 LSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEI 415 (517)
Q Consensus 368 ~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l 415 (517)
.+........|..++ |.+.+..++++..++++++.+.|++.|.++-
T Consensus 309 ~g~~l~p~~A~l~lr--~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~ 354 (464)
T PLN02509 309 EGSGLAPFDCWLCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVKK 354 (464)
T ss_pred cCCCcCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhcCCCccE
Confidence 011124455666665 5577889999999999999999999998853
No 186
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=7.1e-17 Score=167.43 Aligned_cols=241 Identities=13% Similarity=0.135 Sum_probs=156.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|....+| +.++++.|.+ ..+++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 67 ~~pt~~~le----~~la~l~g~~---------~~v~fsSG~~Ai~~al~~ll~-----------~Gd~VI~~~~~y~~t~ 122 (437)
T PRK05613 67 TNPTVEALE----NRIASLEGGV---------HAVAFASGQAAETAAILNLAG-----------AGDHIVTSPRLYGGTE 122 (437)
T ss_pred cChHHHHHH----HHHHHHhCCC---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCccHHHH
Confidence 345555555 5577777764 356777777888766654421 5667888988998764
Q ss_pred ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 ----KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 ----kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
+.+...|+ +++.++ ++ .|+++|+++|+++++ +|++...++++|.+.|+++|+++|+++|+.
T Consensus 123 ~~~~~~l~~~Gi---~v~~vd-~~-----~d~e~l~~~l~~~tk------~V~~e~~~Np~~~v~di~~I~~la~~~gi~ 187 (437)
T PRK05613 123 TLFLVTLNRLGI---EVTFVE-NP-----DDPESWQAAVQPNTK------AFFGETFANPQADVLDIPAVAEVAHRNQVP 187 (437)
T ss_pred HHHHHHHHhcCe---EEEEEC-CC-----CCHHHHHHhCCccCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCe
Confidence 44566788 888887 32 288999999987654 677778888999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchh-HHhh--hcCCccccCCccccccc-
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRA-LVSS--LSTNPEYLKNKATESMQ- 357 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~-~~~~--~~~~~~yl~~~~~~~~~- 357 (517)
+|||++++.+....+ . . .++|.+++++||+++.+ -+.|.+++.+... .... .....+++.........
T Consensus 188 livD~t~a~g~~~~p-~-~-----~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (437)
T PRK05613 188 LIVDNTIATAALVRP-L-E-----LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGL 260 (437)
T ss_pred EEEECCCccccccCh-H-H-----hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccc
Confidence 999999977654322 1 1 17899999999999765 2345555533221 0000 00000001000000000
Q ss_pred -cccCC----------CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010125 358 -VVDYK----------DWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEI 415 (517)
Q Consensus 358 -~~~~~----------~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l 415 (517)
..++. .+....+-...+...|..++ |.+.+..+++++.++|..+++.|+++|.++-
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~ 327 (437)
T PRK05613 261 KYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVAK 327 (437)
T ss_pred cccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 00000 01111233345566676665 6788899999999999999999999998753
No 187
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=9.4e-17 Score=165.23 Aligned_cols=287 Identities=13% Similarity=0.023 Sum_probs=190.2
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
++++.+++.+|++++ ..++|+|+++++..++.+..+ +++.|+++++++..+...++..|+
T Consensus 90 ~lr~~ia~~~~~~~~-------~I~~t~Ga~~~i~~~~~~~~~-----------~gd~Vlv~~P~y~~y~~~~~~~g~-- 149 (380)
T PLN03026 90 RLRAALAEDSGLESE-------NILVGCGADELIDLLMRCVLD-----------PGDKIIDCPPTFGMYVFDAAVNGA-- 149 (380)
T ss_pred HHHHHHHHHhCcChh-------hEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC--
Confidence 345566666777665 689999999988766654322 556788888998888888899999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHH-HhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccccc
Q 010125 217 KNFRAIKTTKSSSYGLSPDSLMAQIN-SDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 295 (517)
Q Consensus 217 ~~v~~vp~d~~~~~~~d~~~Le~~i~-~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~ 295 (517)
+++.+|.+. ++.+|+++|++++. ..+ .+|+++.++|+||.+-|.+++.++++.. +|+++|++|..+...
T Consensus 150 -~~~~v~~~~--~~~~d~~~l~~~~~~~~~------~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~ 219 (380)
T PLN03026 150 -EVIKVPRTP--DFSLDVPRIVEAVETHKP------KLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ 219 (380)
T ss_pred -EEEEeecCC--CCCcCHHHHHHHHhccCC------cEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC
Confidence 999999863 57899999999883 333 3788889999999999999999999865 999999999654321
Q ss_pred CccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCc
Q 010125 296 CPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRS 374 (517)
Q Consensus 296 ~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~a 374 (517)
......+.. ..-..+..+++|.++ .....|+++.. +............| . ...
T Consensus 220 -~~~~~~~~~-~~~viv~~SfSK~~glaGlRiGy~~~~-~~~i~~l~~~~~~~-----------------~------~~~ 273 (380)
T PLN03026 220 -ESRMKWVKK-YDNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPY-----------------N------VSV 273 (380)
T ss_pred -cchHHHHHh-CCCEEEEecchHhhcCccccceeeecC-HHHHHHHHHhcCCC-----------------C------CCH
Confidence 111111111 112356678999997 55778887753 33222111111111 0 122
Q ss_pred hHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHH
Q 010125 375 LKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQI 453 (517)
Q Consensus 375 l~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 453 (517)
+...++...+. .+.+++..++..+.++++.+.|++++++++ .++..+.+.+++.+.
T Consensus 274 ~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~---------------------- 330 (380)
T PLN03026 274 AAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSG---------------------- 330 (380)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCC----------------------
Confidence 33334444332 244566777778888999999998865554 355666667765421
Q ss_pred HHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 454 NEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 454 ~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
....++.+.|.+.|+.........+..++|++++ +.+++++++++|+++
T Consensus 331 -~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 331 -RDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG----KPEHTDALMEALKQL 379 (380)
T ss_pred -CCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence 0124567777777875443333334568999985 456889999888753
No 188
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=6.1e-17 Score=166.57 Aligned_cols=234 Identities=17% Similarity=0.217 Sum_probs=161.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|...++|+. ++++.|.+. ++++++|++|+..++.+..+ +++.|+++...|.+..
T Consensus 59 ~~p~~~~Le~~----lA~~~g~~~---------~i~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~t~ 114 (388)
T PRK07811 59 GNPTRTALEEQ----LAALEGGAY---------GRAFSSGMAATDCLLRAVLR-----------PGDHIVIPNDAYGGTF 114 (388)
T ss_pred CCccHHHHHHH----HHHHhCCCc---------eEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchHHH
Confidence 44666667655 555566543 46667788888877766532 5567888888987654
Q ss_pred HHHH-H---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KAAQ-I---VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 kaa~-~---~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
.... . .|+ +++.++. .|+++|+++++++++ +|+++.+++++|.+.|+++|+++|++||++
T Consensus 115 ~~~~~~~~~~gi---~~~~~d~-------~d~e~l~~~i~~~tk------lV~ie~p~NPtg~~~dl~~I~~la~~~gi~ 178 (388)
T PRK07811 115 RLIDKVFTRWGV---EYTPVDL-------SDLDAVRAAITPRTK------LIWVETPTNPLLSITDIAALAELAHDAGAK 178 (388)
T ss_pred HHHHHhCcCCCe---EEEEeCC-------CCHHHHHHhcCcCCe------EEEEECCCCCcceecCHHHHHHHHHHcCCE
Confidence 4332 2 355 5555543 489999999876543 888889999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
+++|++|+.+....+ .. .++|+++.+++|+++.|.+ .|+++++++.... .+. ++...
T Consensus 179 lIvD~a~a~~~~~~p-~~------~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~-~~~----~~~~~--------- 237 (388)
T PRK07811 179 VVVDNTFASPYLQQP-LA------LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDE-AFA----FLQNG--------- 237 (388)
T ss_pred EEEECCCCccccCCc-hh------hCCcEEEecCceeecCCCCcEEEEEEECCHHHHH-HHH----HHHHh---------
Confidence 999999977643222 11 2789999999999998754 5777777654322 221 11100
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CeeE
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----------------HFAV 423 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----------------~~~~ 423 (517)
.+........|..++. .+.+..++++..+++..+.+.|++.|+++-+.-| ..++
T Consensus 238 -------~g~~~s~~~a~l~~~~--L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~ 308 (388)
T PRK07811 238 -------AGAVPGPFDAYLTLRG--LKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGM 308 (388)
T ss_pred -------cCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCce
Confidence 0111233455666553 4567889999999999999999999988644222 1457
Q ss_pred EEEEecC
Q 010125 424 VCFRVSP 430 (517)
Q Consensus 424 v~f~~~~ 430 (517)
++|.+.+
T Consensus 309 ~s~~~~~ 315 (388)
T PRK07811 309 VSVRLAG 315 (388)
T ss_pred EEEEeCC
Confidence 8898864
No 189
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=1.2e-16 Score=164.94 Aligned_cols=219 Identities=18% Similarity=0.189 Sum_probs=152.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH-
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL- 205 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~- 205 (517)
..|....+| +.++++.|.+ ..+++++|++|+..++.+... +++.|+++...|...
T Consensus 58 ~~p~~~~Le----~~lA~l~g~~---------~~v~~~sG~~Ai~~~l~all~-----------pGD~Vvv~~p~Y~~t~ 113 (405)
T PRK08776 58 GNPTRDLLG----EALAELEGGA---------GGVITATGMGAINLVLNALLQ-----------PGDTLVVPHDAYGGSW 113 (405)
T ss_pred CChHHHHHH----HHHHHHhCCC---------ceEEEcCHHHHHHHHHHHHhC-----------CCCEEEEccCCchHHH
Confidence 334445555 5567777753 357888888887666654422 556677888888763
Q ss_pred ---HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 206 ---QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 206 ---~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
...+...|+ +++.++. .|+++|++++++++ .+|+++.++|++|.+.|+++|+++|++||++
T Consensus 114 ~~~~~~~~~~g~---~v~~v~~-------~d~~~l~~~i~~~t------klV~l~~P~NPtG~v~dl~~I~~la~~~gi~ 177 (405)
T PRK08776 114 RLFNALAKKGHF---ALITADL-------TDPRSLADALAQSP------KLVLIETPSNPLLRITDLRFVIEAAHKVGAL 177 (405)
T ss_pred HHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCcCC------eEEEEECCCCCCCccCCHHHHHHHHHHcCCE
Confidence 333444566 6776653 37899999886544 3788889999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
++||++|+.+....+ . . .++|.+..++||+++.|-+ .|++++++++... .+.....+
T Consensus 178 vIvD~a~a~~~~~~p-l----~--~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~-~l~~~~~~------------- 236 (405)
T PRK08776 178 TVVDNTFLSPALQKP-L----E--FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQ-QLVWWANA------------- 236 (405)
T ss_pred EEEECCCcccccCCc-c----c--ccCCEEEecCceeecCCCCceEEEEEeCCHHHHH-HHHHHHHh-------------
Confidence 999999976542211 1 1 2789999999999997754 5777676654332 22110000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEI 415 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l 415 (517)
.+-....+..|..++ |.+.+..++++..+++..+.+.|++.|.+.-
T Consensus 237 -------~g~~~s~~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~ 282 (405)
T PRK08776 237 -------LGLTGSPFDAFLTLR--GLRTLDARLRVHQENADAIAALLDGHAAVNQ 282 (405)
T ss_pred -------cCCCCCHHHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeE
Confidence 011124566676664 6678899999999999999999999988753
No 190
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=6.4e-17 Score=167.72 Aligned_cols=241 Identities=14% Similarity=0.144 Sum_probs=155.2
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
.|....+|+ .++++.|.+ .++++++|+.|+..++.+... +++.|+++...|.+...
T Consensus 68 ~p~~~~Le~----~lA~l~g~~---------~av~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~~ 123 (436)
T PRK07812 68 NPTQDVVEQ----RIAALEGGV---------AALLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTYN 123 (436)
T ss_pred CchHHHHHH----HHHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHHH
Confidence 455666665 466666654 468888999998877765432 55667777777766554
Q ss_pred H----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 208 A----AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 208 a----a~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
. +...|+ +++.++ +. .|+++++++|+++++ +|++..+++++|.+.|+++|+++|++||+++
T Consensus 124 ~~~~~l~~~Gi---~v~~vd-d~-----~d~e~l~~ai~~~tk------lV~ie~~sNp~G~v~Dl~~I~~la~~~gi~l 188 (436)
T PRK07812 124 LFHYTLPKLGI---EVSFVE-DP-----DDLDAWRAAVRPNTK------AFFAETISNPQIDVLDIPGVAEVAHEAGVPL 188 (436)
T ss_pred HHHHHhhcCeE---EEEEEC-CC-----CCHHHHHHhCCCCCe------EEEEECCCCCCCeecCHHHHHHHHHHcCCEE
Confidence 3 333566 777774 22 289999998876543 8889999999999999999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCCCc-ceEEEEeCchh-HHhh-----hcCCccccCCcccc--
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD-CCCLWVKDPRA-LVSS-----LSTNPEYLKNKATE-- 354 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~~~~~~-~~~~-----~~~~~~yl~~~~~~-- 354 (517)
+||++++.+....+ .. .++|.++.++||+++.+-+ .|.+++.+... .... ....++|.......
T Consensus 189 iVD~t~a~~~~~~p-l~------~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (436)
T PRK07812 189 IVDNTIATPYLIRP-LE------HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELG 261 (436)
T ss_pred EEECCCcccccCCc-hh------cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcc
Confidence 99999977654322 11 2799999999999976522 44555533211 0000 01112221100000
Q ss_pred ccccc-cCC-CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 355 SMQVV-DYK-DWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 355 ~~~~~-~~~-~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
..... ... .+....+-...+...|..++ |.+.+..++++..++|..+.+.|++.|.++-+
T Consensus 262 ~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V 323 (436)
T PRK07812 262 PPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVASV 323 (436)
T ss_pred hhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 00000 000 00011223344556665554 77889999999999999999999999987543
No 191
>PLN02242 methionine gamma-lyase
Probab=99.78 E-value=1.5e-16 Score=164.75 Aligned_cols=223 Identities=13% Similarity=0.128 Sum_probs=151.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|...++|+. ++++.|.+ ..++++||++|+..++.+... +++.|+++...|....
T Consensus 74 ~~Pt~~~LE~~----lA~l~g~~---------~~l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~ 129 (418)
T PLN02242 74 FNPTVLNLGRQ----MAALEGTE---------AAYCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTH 129 (418)
T ss_pred CChhHHHHHHH----HHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 45666777654 66666765 357899999999888776543 5667888888776665
Q ss_pred HHH-----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC
Q 010125 207 KAA-----QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 281 (517)
Q Consensus 207 kaa-----~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi 281 (517)
..+ +..|+ +++.++. .|+++|+++|++. ++.+|+++.++|++|.+.|+++|+++|++||+
T Consensus 130 ~~~~~~~~~~~G~---~~~~~d~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi 194 (418)
T PLN02242 130 ALLAHFLPRKCNI---TTTFVDI-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGV 194 (418)
T ss_pred HHHHHhhhhccCc---eEEEcCC-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCC
Confidence 543 34566 6666643 2899999998653 12378889999999999999999999999999
Q ss_pred eEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 282 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
+++||.+|+.+. ..+ .. . ++|+++.+++|+++.+.. +|+++. ++..............
T Consensus 195 ~livDea~~~~~-~~~--~~----~-g~divv~S~SK~l~g~g~~~gG~iv~-~~~li~~l~~~~~~~~----------- 254 (418)
T PLN02242 195 TVVVDNTFAPMV-LSP--AR----L-GADVVVHSISKFISGGADIIAGAVCG-PAELVNSMMDLHHGAL----------- 254 (418)
T ss_pred EEEEECCCCccC-CCH--HH----c-CCcEEEEeCccccCCCCCceEEEEEc-CHHHHHHHHHHhhhhh-----------
Confidence 999999995432 221 11 1 589999999999987643 355554 3433322111110000
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
. ..+....+..+|..+ .+...+..+++++.++++++.+.|++. ++++..
T Consensus 255 -----~-~~g~~~~~~~A~l~~--~~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~y 303 (418)
T PLN02242 255 -----M-LLGPTMNPKVAFELS--ERLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIY 303 (418)
T ss_pred -----h-ccCCCCCHHHHHHHH--cCCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEEC
Confidence 0 011122334444444 455677888999999999999999998 477764
No 192
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=7.4e-17 Score=164.45 Aligned_cols=234 Identities=12% Similarity=0.123 Sum_probs=168.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
...|....+|+.++ ++-|.. .++++++|+.|+.+++.+... +++.|+++...|.+.
T Consensus 59 ~~nPt~~~le~~la----~LEg~~---------~a~~~~SGmaAi~~~~~~ll~-----------~GD~Vv~~~~~Yg~t 114 (395)
T PRK08114 59 RGTLTHFSLQEAMC----ELEGGA---------GCALYPCGAAAVANAILAFVE-----------QGDHVLMTGTAYEPT 114 (395)
T ss_pred CCChhHHHHHHHHH----HHhCCC---------eEEEEhHHHHHHHHHHHHHcC-----------CCCEEEEeCCCcHHH
Confidence 45688888887644 444432 568888899998877765422 566788888888776
Q ss_pred HHHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhC-
Q 010125 206 QKAA----QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFG- 280 (517)
Q Consensus 206 ~kaa----~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~g- 280 (517)
.+.+ +..|+ ++..++. .|.+.++++|+++++ +|.+..++|++|.+-||++|+++||++|
T Consensus 115 ~~l~~~~l~~~Gi---~v~~vd~-------~d~~~l~~~l~~~Tr------lV~~EtpsNp~~~v~DI~~Ia~ia~~~g~ 178 (395)
T PRK08114 115 QDFCSKILSKLGV---TTTWFDP-------LIGADIAKLIQPNTK------VVFLESPGSITMEVHDVPAIVAAVRSVNP 178 (395)
T ss_pred HHHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCCCce------EEEEECCCCCCCEeecHHHHHHHHHHhCC
Confidence 6554 45688 8888863 367889999987654 8999999999999999999999999985
Q ss_pred -CeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC--CcceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 281 -IWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT--LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 281 -i~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
+.++||++|+.+.. .+.... ++|.+..+.|||++++ ..+|+++.+ ++... .+... .+
T Consensus 179 g~~lvVDnT~a~p~~-~~pl~~------GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~-~l~~~-~~---------- 238 (395)
T PRK08114 179 DAVIMIDNTWAAGVL-FKALDF------GIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWE-QLREN-SY---------- 238 (395)
T ss_pred CCEEEEECCCccccc-cCHHHc------CCcEEEEcCcccccCCCcceeEEEEcC-HHHHH-HHHHH-HH----------
Confidence 99999999988765 322221 7999999999999988 467766543 32211 11100 00
Q ss_pred cccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC-----C-----------C
Q 010125 358 VVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV-FP-----C-----------H 420 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~-~~-----~-----------~ 420 (517)
..+....+...|..++ |.+-+.-+++++.++|..+.+.|+++|.++-+ .| | .
T Consensus 239 ---------~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~ 307 (395)
T PRK08114 239 ---------LMGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGS 307 (395)
T ss_pred ---------hccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCC
Confidence 1122335567776665 66788889999999999999999999988633 22 1 2
Q ss_pred eeEEEEEecC
Q 010125 421 FAVVCFRVSP 430 (517)
Q Consensus 421 ~~~v~f~~~~ 430 (517)
.++++|.+..
T Consensus 308 gg~~sf~l~~ 317 (395)
T PRK08114 308 SGLFSFVLKK 317 (395)
T ss_pred ceEEEEEecC
Confidence 4588898864
No 193
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.78 E-value=5.9e-17 Score=165.58 Aligned_cols=234 Identities=13% Similarity=0.167 Sum_probs=163.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
...|....+|++++ ++.|.+ .+++++||++|+..++.+... +++.|++++..|...
T Consensus 47 ~gnPt~~~lE~~lA----~l~g~~---------~~~~~~sG~~Ai~~al~all~-----------~GD~Vl~~~~~y~~t 102 (377)
T TIGR01324 47 RGTLTHFALQDAMC----ELEGGA---------GCYLYPSGLAAVTNSILAFVK-----------AGDHVLMVDSAYEPT 102 (377)
T ss_pred CCCccHHHHHHHHH----HHhCCC---------cEEEECcHHHHHHHHHHHhcC-----------CCCEEEEcCCCcHHH
Confidence 34577777887654 555543 468899999999887765522 566788888888665
Q ss_pred HHH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC
Q 010125 206 QKA----AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 281 (517)
Q Consensus 206 ~ka----a~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi 281 (517)
... ....|+ +++.++.+ +.++|+++++++++ +|+++.+++++|.+.|+++|+++|++||+
T Consensus 103 ~~~~~~~~~~~gi---~v~~~d~~-------~~e~l~~~i~~~tk------lV~lesp~Np~g~~~dl~~I~~la~~~g~ 166 (377)
T TIGR01324 103 RYFCDIVLKRMGV---DITYYDPL-------IGEDIATLIQPNTK------VLFLEAPSSITFEIQDIPAIAKAARNPGI 166 (377)
T ss_pred HHHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCCCce------EEEEECCCCCCCcHHHHHHHHHHHHHcCC
Confidence 543 345677 77766432 22788888876543 89999999999999999999999999999
Q ss_pred eEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 282 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
|++||++|+.+...-+ .. .++|.++.+.|||++.+.+ .|+++.+ ++....... ..++.
T Consensus 167 ~livD~t~a~g~~~~p-l~------~gaDivv~S~tK~l~G~~d~~gG~v~~~-~~~~~~l~~--~~~~~---------- 226 (377)
T TIGR01324 167 VIMIDNTWAAGLLFKP-LE------HGVDISIQAGTKYLVGHSDIMIGTVVAN-ARTWDQLRE--HSYLM---------- 226 (377)
T ss_pred EEEEECCCccccccCc-cc------cCceEEEecCceeccCCCCceEEEEEeC-HHHHHHHHH--HHHHh----------
Confidence 9999999988765322 11 2799999999999987754 5655554 332221110 01111
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EecC-----C-----------Cee
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFE-IVFP-----C-----------HFA 422 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-l~~~-----~-----------~~~ 422 (517)
+....+...|..++ |.+-+..+++++.++|..+.+.|++.|.++ +..| | ..+
T Consensus 227 ---------G~~l~p~~a~~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~ 295 (377)
T TIGR01324 227 ---------GQMVDADDAYTTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSG 295 (377)
T ss_pred ---------CCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCc
Confidence 11224456676665 556778889999999999999999998874 3322 1 256
Q ss_pred EEEEEecC
Q 010125 423 VVCFRVSP 430 (517)
Q Consensus 423 ~v~f~~~~ 430 (517)
+++|.+..
T Consensus 296 ~~s~~l~~ 303 (377)
T TIGR01324 296 LFSFVLQR 303 (377)
T ss_pred eEEEEECC
Confidence 88898864
No 194
>PRK08175 aminotransferase; Validated
Probab=99.77 E-value=4.7e-16 Score=161.03 Aligned_cols=320 Identities=12% Similarity=0.081 Sum_probs=199.4
Q ss_pred cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCC
Q 010125 121 VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQ 200 (517)
Q Consensus 121 ~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~ 200 (517)
....|....+..++++.+++|+.+.+|++-.. ....++|+|+++++...+.+..+ +++.|+++++
T Consensus 59 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~P 123 (395)
T PRK08175 59 DTHGYSTSRGIPRLRRAISRWYQDRYDVDIDP----ESEAIVTIGSKEGLAHLMLATLD-----------HGDTVLVPNP 123 (395)
T ss_pred CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC-----------CCCEEEEcCC
Confidence 34567666678899999999999887764221 01588999988887655443321 5667888999
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccCh---hHHHHHHH
Q 010125 201 THCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPL---KPLCDVAK 277 (517)
Q Consensus 201 ~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl---~eI~~i~~ 277 (517)
+|......++.+|+ +++.||++++ ..++++|++++++.. ..+.+|+++.++|+||.+-+. ++|+++|+
T Consensus 124 ~y~~~~~~~~~~g~---~~~~v~~~~~---~~~~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~ 194 (395)
T PRK08175 124 SYPIHIYGAVIAGA---QVRSVPLVEG---VDFFNELERAIRESY---PKPKMMILGFPSNPTAQCVELEFFEKVVALAK 194 (395)
T ss_pred CCcchHHHHHHcCC---eEEEEecccC---CCcHHHHHHHHhhcc---CCceEEEEeCCCCCCCCCCCHHHHHHHHHHHH
Confidence 99988888899999 9999999753 335889998886421 123477778889999988665 79999999
Q ss_pred HhCCeEEcccccccccccCccccccc--cCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccccCCcccc
Q 010125 278 QFGIWVHVDAAYAGSACICPEFRHFI--DGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEYLKNKATE 354 (517)
Q Consensus 278 ~~gi~lhvDaA~g~~~~~~~~~~~~~--~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 354 (517)
+||+++++|.+|+............. .+......++.++.|.++.| ..+|++.. +++.. +.+.....+..
T Consensus 195 ~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~-~~~~~~~~~~~----- 267 (395)
T PRK08175 195 RYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELV-SALARIKSYHD----- 267 (395)
T ss_pred HcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHH-HHHHHHHhhcc-----
Confidence 99999999999976543111111111 11112224567899999654 66787764 44332 22221111110
Q ss_pred ccccccCCCccccCCCCCCchHHHHHHHHh--cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCC
Q 010125 355 SMQVVDYKDWQITLSRRFRSLKLWFVIRNY--GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSP 432 (517)
Q Consensus 355 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~--g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~ 432 (517)
++ . ......++...+ ..+.++++.++..++++++.+.|++. ++.+..+.....+++++...-
T Consensus 268 ---------~~---~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~~g~~i~i~l~~~~ 331 (395)
T PRK08175 268 ---------YG---T---FTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPKASMYVWAKIPEPY 331 (395)
T ss_pred ---------cC---C---CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCCEEEEEEEECCccc
Confidence 00 0 111112222222 23445666677778888999999887 676543334555566654320
Q ss_pred cchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE--CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 433 VLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVL--GGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
. .....++.+.+. +.|+...++..+ .+..++|+++. .+++.+.++++.|.++.+
T Consensus 332 ----------------~----~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~---~~~~~~~~al~~l~~~l~ 388 (395)
T PRK08175 332 ----------------A----AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALI---ENRDRIRQAIRGIKAMFR 388 (395)
T ss_pred ----------------C----CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeC---CCHHHHHHHHHHHHHHHH
Confidence 0 000245555554 467655444333 23468999984 356788888888877765
Q ss_pred H
Q 010125 510 A 510 (517)
Q Consensus 510 ~ 510 (517)
+
T Consensus 389 ~ 389 (395)
T PRK08175 389 A 389 (395)
T ss_pred h
Confidence 3
No 195
>PLN02271 serine hydroxymethyltransferase
Probab=99.77 E-value=9.2e-17 Score=166.01 Aligned_cols=356 Identities=10% Similarity=0.043 Sum_probs=216.0
Q ss_pred cceeCCCCCChHHHHHHHHHhcc-ccccccc------ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGF-NIVGFNW------ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 168 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~~------~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 168 (517)
.+..+++-......+.+.+.+.+ |.+...| .......++|..+.+...++||++.... +.-+-.-+||.
T Consensus 150 ~l~LIASEN~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~----gaNVQp~SGs~ 225 (586)
T PLN02271 150 GIELIASENFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKW----GVNVQPYSCTS 225 (586)
T ss_pred CeeeccccccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCccccc----ccceeeccHHH
Confidence 34555554444444455554443 4444333 3344567899999999999999875320 11144458899
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEEeCCC---CchHHH------HHHHHcCCCCCCEEEEe--cCCCCCcccCHHHH
Q 010125 169 AILCTLTAARDRVLNKIGRENISKLIVYGSDQ---THCALQ------KAAQIVGIDVKNFRAIK--TTKSSSYGLSPDSL 237 (517)
Q Consensus 169 a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~---~H~s~~------kaa~~~G~g~~~v~~vp--~d~~~~~~~d~~~L 237 (517)
||+.++.+..+ |++.|+..+. .|.+.. +-+...|+ .+..+| +|+ +++.+|.++|
T Consensus 226 AN~aV~~ALl~-----------PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~---~~~~vpY~~d~-~~g~IDyd~l 290 (586)
T PLN02271 226 ANFAVYTGLLL-----------PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASI---FFESLPYKVNP-QTGYIDYDKL 290 (586)
T ss_pred HHHHHHHHhcC-----------CCCEEEEecCCCCCchhcccccccccccccccc---eEEEEEccccc-ccCccCHHHH
Confidence 99887766532 6667776444 566643 23455666 566666 553 3689999999
Q ss_pred HHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccc
Q 010125 238 MAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAH 317 (517)
Q Consensus 238 e~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~h 317 (517)
++..... +|.+|++.+...+ ..-|+++|++||+++|++++||+||..+.+....+..- +.++|+++++.|
T Consensus 291 ek~a~~~-----rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TTH 360 (586)
T PLN02271 291 EEKALDF-----RPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTTH 360 (586)
T ss_pred HHHhhhc-----CCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCCc
Confidence 9854332 3557777554444 66789999999999999999999999988766544322 337999999999
Q ss_pred cccCCCCcceEEEEeCchhHHhhhcCCccccCCccc----ccccccc--CCCccccCCCCCC-chHHHHHHHHhcHHHHH
Q 010125 318 KWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKAT----ESMQVVD--YKDWQITLSRRFR-SLKLWFVIRNYGVANLR 390 (517)
Q Consensus 318 K~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~----~~~~~~~--~~~~~~~~sr~~~-al~~~~~l~~~g~~g~~ 390 (517)
|||.+|.| |++++++... ... .+....+... +.....+ ..+ .++++-... ..++..+++......|+
T Consensus 361 KtLrGPrG-G~I~~r~~~~--~~~--~g~~gs~s~~~~~~d~~~kI~~aVfP-glqgGphn~~IAalAvalkea~~~efk 434 (586)
T PLN02271 361 KSLRGPRG-GIIFYRKGPK--LRK--QGMLLSHGDDNSHYDFEEKINFAVFP-SLQGGPHNNHIAALAIALKQVATPEYK 434 (586)
T ss_pred ccCCCCCc-eEEEeccccc--ccc--cCCccccccccccHHHHHHhhcccCC-ccccChhHHHHHHHHHHHHHHhChHHH
Confidence 99999998 8888865421 000 0000000000 0000000 011 344443322 24555667766566678
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCc
Q 010125 391 HFLRSHVNMAKLFERLVSGDKRFEIVFP-CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGK 469 (517)
Q Consensus 391 ~~i~~~~~~a~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 469 (517)
+..++..++|+.|++.|.+. ||+++.. .+..+|.+.+.+.++ ......+.|.+.|+
T Consensus 435 ~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl~~~g~----------------------~G~~ae~~Le~~~I 491 (586)
T PLN02271 435 AYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLWDLTTLGL----------------------TGKNYEKVCEMCHI 491 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeecCcccCC----------------------CHHHHHHHHHHcCe
Confidence 89999999999999999886 9998753 345566666554321 01233344444555
Q ss_pred EEEeeeeEC-----CEeEEEEEe---cCCCCcHHHHHHHHHHHHHHHH
Q 010125 470 AYMTHAVLG-----GIYAIRFAT---GATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 470 ~~~~~~~~~-----g~~~lR~~~---~~~~t~~~di~~l~~~l~~~~~ 509 (517)
..-..+... -...||+.. +.....++|++++.+.|.++++
T Consensus 492 ~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 492 TLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred EeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 321111111 134688875 2333455788888777777654
No 196
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=1.1e-16 Score=164.81 Aligned_cols=220 Identities=15% Similarity=0.126 Sum_probs=157.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|...++|+ .++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+..
T Consensus 63 ~~pt~~~Le~----~lA~l~g~~---------~~l~~~sgt~Ai~~~l~al~~-----------~GD~Vl~~~~~y~~~~ 118 (394)
T PRK07050 63 ATPTSLALAQ----RLAEIEGGR---------HALLQPSGLAAISLVYFGLVK-----------AGDDVLIPDNAYGPNR 118 (394)
T ss_pred CCHHHHHHHH----HHHHHhCCC---------eEEEeccHHHHHHHHHHHHhC-----------CCCEEEEecCCcccHH
Confidence 4455555554 566666643 579999999999888876532 6677888888987654
Q ss_pred ----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 ----KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 ----kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
..+...|+ +++.++.. +.++|+++|+++++ +|+++.+++++|.+.++++|+++|++||++
T Consensus 119 ~~~~~~~~~~Gi---~v~~vd~~-------~~~~l~~~i~~~tk------lV~le~p~Np~~~~~di~~I~~ia~~~gi~ 182 (394)
T PRK07050 119 DHGEWLARDFGI---TVRFYDPL-------IGAGIADLIQPNTR------LIWLEAPGSVTMEVPDVPAITAAARARGVV 182 (394)
T ss_pred HHHHHHHHhcCe---EEEEECCC-------CHHHHHHhcCCCCe------EEEEECCCCCCccHhhHHHHHHHHHHcCCE
Confidence 35567788 88887642 44678888866543 788999999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
+++|++|+.+...-+ .. .++|.++.+++|+++...+ .|++++++++...+.. ....++
T Consensus 183 livD~a~a~~~~~~~-l~------~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~-~~~~~~------------ 242 (394)
T PRK07050 183 TAIDNTYSAGLAFKP-FE------HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLK-LARMRL------------ 242 (394)
T ss_pred EEEECCcccccccCH-HH------cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHH-HHHHhc------------
Confidence 999999987654322 11 1689999999999976544 5667776665432211 100111
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
+-...+...|.+++ |.+.+..++++..++|.++.+.|++.|.+.-+
T Consensus 243 --------G~~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v 288 (394)
T PRK07050 243 --------GIGVSADDCSLVLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIATV 288 (394)
T ss_pred --------CCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 11124455576665 45677789999999999999999999887544
No 197
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=9.8e-17 Score=164.63 Aligned_cols=223 Identities=13% Similarity=0.150 Sum_probs=154.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|....+| ++++++.|.+ .+++++||++|+..++.+... +++.|++++..|.+..
T Consensus 50 ~~pt~~~L~----~~lA~l~g~~---------~~i~~~sg~~Ai~~~l~~l~~-----------~GD~Vl~~~~~y~~~~ 105 (386)
T PRK08045 50 GNPTRDVVQ----RALAELEGGA---------GAVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSY 105 (386)
T ss_pred CCccHHHHH----HHHHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 445555565 4566666632 478999999888777665422 5667888888887644
Q ss_pred HHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEc
Q 010125 207 KAA-QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 207 kaa-~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhv 285 (517)
..+ .+.+.+..++..++ ..|+++++++++++++ +|+++.++|++|.+-|+++|+++|+++|++++|
T Consensus 106 ~~~~~~~~~~gi~v~~vd-------~~d~e~l~~~l~~~tk------lV~l~sP~NPtG~v~di~~I~~ia~~~g~~viv 172 (386)
T PRK08045 106 RLFDSLAKRGCYRVLFVD-------QGDEQALRAALAEKPK------LVLVESPSNPLLRVVDIAKICHLAREAGAVSVV 172 (386)
T ss_pred HHHHHHHhhCCeEEEEeC-------CCCHHHHHHhcccCCe------EEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 332 23322211555542 3589999998876443 788899999999999999999999999999999
Q ss_pred ccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccccCCC
Q 010125 286 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKD 363 (517)
Q Consensus 286 DaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 363 (517)
|++|+.+....+ .. .++|.++.+.|||++++.+ .|++++++++... .+.....++
T Consensus 173 Deay~~~~~~~p-l~------~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~-~l~~~~~~~--------------- 229 (386)
T PRK08045 173 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVT-ELAWWANNI--------------- 229 (386)
T ss_pred ECCCCccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCcHHHHH-HHHHHHHhc---------------
Confidence 999977654222 11 1689999999999987765 6777666654322 221111111
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 364 WQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 364 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
+-...++..|.+++.+ +.+..+++++.+++..+.+.|++.|.++-+
T Consensus 230 -----g~~~~p~~~~l~~rgl--~tl~~R~~~~~~na~~la~~L~~~p~v~~V 275 (386)
T PRK08045 230 -----GVTGGAFDSYLLLRGL--RTLVPRMELAQRNAQAIVKYLQTQPLVKKL 275 (386)
T ss_pred -----CCCCCHHHHHHHHhhh--ccHHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence 1112456677777644 568899999999999999999999987543
No 198
>PLN02368 alanine transaminase
Probab=99.77 E-value=1.5e-16 Score=164.19 Aligned_cols=281 Identities=10% Similarity=-0.005 Sum_probs=189.7
Q ss_pred hHHHHHHHHHhcc--cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 106 IAGFLGEMLSSGF--NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 106 ~~~~~~~~l~~~~--n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
++..+.+.+.... +.....|....+..++.+++++|+.+..|++-+ ..++++|+|+++++..++.+....
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-----~~~I~it~Ga~~al~~~~~~l~~~--- 153 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSD-----PELIFLTDGASKGVMQILNAVIRG--- 153 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----hhhEEEcccHHHHHHHHHHHHcCC---
Confidence 4555555554421 222446776667789999999999998886432 137899999999987776655311
Q ss_pred HhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcc
Q 010125 184 KIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAI 263 (517)
Q Consensus 184 ~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~ 263 (517)
+++.|++.++++..+..+++..|. +++.||+++++++.+|+++|++++++...++.++.+++++.++|||
T Consensus 154 -------pGd~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPT 223 (407)
T PLN02368 154 -------EKDGVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPT 223 (407)
T ss_pred -------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCC
Confidence 566788889999999999999999 9999999865568999999999998643333345578888999999
Q ss_pred cccc---ChhHHHHHHHHhCCeEEcccccccccccCc-cccc---cccCC----C-CCCee-eeccccccC--CCCcceE
Q 010125 264 TAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRH---FIDGV----E-GADSF-SLNAHKWFF--ATLDCCC 328 (517)
Q Consensus 264 G~id---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~-~~~~---~~~g~----~-~aDsi-~~~~hK~l~--~p~~~g~ 328 (517)
|.+- .+++|+++|++||+|+++|.+|+...+... .+.. .+..+ + ....+ ..+++|.++ ..+.+|+
T Consensus 224 G~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy 303 (407)
T PLN02368 224 GQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGY 303 (407)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEE
Confidence 9984 477888899999999999999977654221 1111 11111 1 11244 455899973 6688999
Q ss_pred EEE--eCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcH------------HHHHHHHH
Q 010125 329 LWV--KDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGV------------ANLRHFLR 394 (517)
Q Consensus 329 l~~--~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~------------~g~~~~i~ 394 (517)
+++ .++..+. .+.... ... .....+..+++...+.. +..+++++
T Consensus 304 ~i~~~~~~~li~-~~~~~~-~~~--------------------~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~ 361 (407)
T PLN02368 304 FEMTNIPPKTVE-EIYKVA-SIA--------------------LSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILE 361 (407)
T ss_pred EEEeCCCHHHHH-HHHHHh-ccc--------------------CCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHH
Confidence 886 3433332 221110 000 00133444444444421 11234677
Q ss_pred HHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEE
Q 010125 395 SHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFR 427 (517)
Q Consensus 395 ~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~ 427 (517)
...++++.+.+.|+++|++.+. .|+.+++.|.
T Consensus 362 ~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~~~ 393 (407)
T PLN02368 362 SLRRRARMMTDGFNSCKNVVCN-FTEGAMYSFP 393 (407)
T ss_pred HHHHHHHHHHHHHhCCCCeEeC-CCCeeeEecc
Confidence 8888999999999999998864 6777777774
No 199
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=1.6e-16 Score=162.58 Aligned_cols=232 Identities=15% Similarity=0.155 Sum_probs=162.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|....+|+.++++ .|.. .+++++||++|+..++.+..+ +++.|++++..|....
T Consensus 59 ~npt~~~Le~~iA~l----e~~~---------~~~~~~sG~~Ai~~~l~all~-----------~GD~Vvv~~~~Y~~t~ 114 (394)
T PRK09028 59 GTPTHFAFQAAIVEL----EGGA---------GTALYPSGAAAISNALLSFLK-----------AGDHLLMVDSCYEPTR 114 (394)
T ss_pred CCchHHHHHHHHHHH----hCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 356667787665544 3332 568999999999877765432 5667888888886665
Q ss_pred HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KA----AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 ka----a~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
.. ....|+ ++..++.+ +.+.|+++++++++ +|+++.++|++|.+.|+++|+++|++||+|
T Consensus 115 ~l~~~~l~~~Gi---~v~~v~~~-------~~e~l~~~l~~~Tk------lV~lespsNPtg~v~dl~~I~~la~~~g~~ 178 (394)
T PRK09028 115 DLCDKILKGFGI---ETTYYDPM-------IGEGIRELIRPNTK------VLFLESPGSITMEVQDVPTLSRIAHEHDIV 178 (394)
T ss_pred HHHHHhhhhcce---EEEEECCC-------CHHHHHHhcCcCce------EEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 43 344677 77766532 45778888866543 899999999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
++||++|+.+...-| .. -+||.+..+.|||++++-+ .|++ +.++....+ +.....+
T Consensus 179 lvvD~t~a~p~~~~P-l~------~GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~~~-l~~~~~~------------- 236 (394)
T PRK09028 179 VMLDNTWASPINSRP-FE------MGVDISIQAATKYIVGHSDVMLGTA-TANEKHWDQ-LREHSYL------------- 236 (394)
T ss_pred EEEECCccccccCCc-cc------cCceEEEEeCCeEecCCCCEEEEEE-ECCHHHHHH-HHHHHHh-------------
Confidence 999999987654322 11 1799999999999987722 4443 444433221 1100000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC-----C-----------CeeE
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV-FP-----C-----------HFAV 423 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~-~~-----~-----------~~~~ 423 (517)
.+....+...|..++ |.+.+.-+++++.++|..+.+.|++.|.++-+ .| | ..++
T Consensus 237 -------~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~ 307 (394)
T PRK09028 237 -------MGQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGL 307 (394)
T ss_pred -------cCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCce
Confidence 122235567776665 66778899999999999999999999987533 22 1 1468
Q ss_pred EEEEec
Q 010125 424 VCFRVS 429 (517)
Q Consensus 424 v~f~~~ 429 (517)
++|.+.
T Consensus 308 ~sf~l~ 313 (394)
T PRK09028 308 FSFVLK 313 (394)
T ss_pred EEEEEC
Confidence 899886
No 200
>PRK09105 putative aminotransferase; Provisional
Probab=99.77 E-value=3.1e-16 Score=160.72 Aligned_cols=280 Identities=11% Similarity=0.048 Sum_probs=186.0
Q ss_pred HHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCC
Q 010125 138 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVK 217 (517)
Q Consensus 138 v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~ 217 (517)
+++.+++.+|++++ .+++|+|+++++..++.+..+ +++.|++++++|..+..+++..|+
T Consensus 83 Lr~aia~~~~v~~e-------~I~it~Gs~~ai~~~~~~l~~-----------~gd~Vli~~P~y~~~~~~~~~~g~--- 141 (370)
T PRK09105 83 LRTLFAAQEGLPAD-------HVMAYAGSSEPLNYAVLAFTS-----------PTAGLVTADPTYEAGWRAADAQGA--- 141 (370)
T ss_pred HHHHHHHHhCcChh-------hEEEcCChHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHHcCC---
Confidence 44455667788765 789999999998877665432 456688888999999999999999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHH--hCCeEEccccccccccc
Q 010125 218 NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGSACI 295 (517)
Q Consensus 218 ~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~--~gi~lhvDaA~g~~~~~ 295 (517)
+++.+|.+. ++.+|+++|++.. +. +.+|+++.++|+||.+-+.++|.++++. +|+|+++|++|..+..
T Consensus 142 ~~~~v~~~~--~~~~d~~~l~~~~-~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~- 211 (370)
T PRK09105 142 PVAKVPLRA--DGAHDVKAMLAAD-PN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD- 211 (370)
T ss_pred eEEEecCCC--CCCCCHHHHHhcC-CC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc-
Confidence 999999874 5789999998762 22 2367888999999999998888888764 4899999999954321
Q ss_pred CccccccccCCCCCCeee-eccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCC
Q 010125 296 CPEFRHFIDGVEGADSFS-LNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFR 373 (517)
Q Consensus 296 ~~~~~~~~~g~~~aDsi~-~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~ 373 (517)
.+....... ...+.++ .+++|.++ ..+.+|+++.. +... +.+... .+ + ...
T Consensus 212 ~~s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~~i-~~l~~~-~~----------------~------~~~ 264 (370)
T PRK09105 212 APSVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAAR-PDLL-AKLARF-GH----------------N------PLP 264 (370)
T ss_pred CcchHHHHh--hCCCEEEEecccHhhcCCccceeeeecC-HHHH-HHHHhc-CC----------------C------CcC
Confidence 111111110 1345555 46899996 55678988864 3322 222111 00 0 012
Q ss_pred chHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHH
Q 010125 374 SLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQ 452 (517)
Q Consensus 374 al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 452 (517)
.....++...+. .+.+++..++..++++++.+.|++. ++++. +++.+++.+.+...
T Consensus 265 ~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~~f~~~~~~~~--------------------- 321 (370)
T PRK09105 265 VPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT-PSQANCFMVDVKRP--------------------- 321 (370)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC-CCCCcEEEEeCCCC---------------------
Confidence 223344444443 3445666677888899999999886 77765 56666665544211
Q ss_pred HHHHHHHHHHHHHhcCcEEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 453 INEFNRELLESINASGKAYMTHAVLG-GIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 453 ~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
..++.+.|.++|+.. . ..+. ...++|+++. +++++++++++|+++.
T Consensus 322 ----~~~l~~~L~~~gI~v-~-~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 322 ----AKAVADAMAKQGVFI-G-RSWPIWPNWVRVTVG----SEEEMAAFRSAFAKVM 368 (370)
T ss_pred ----HHHHHHHHHHCCcEE-e-cCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 245677777777654 2 2222 2579999985 4678999999988764
No 201
>PLN02672 methionine S-methyltransferase
Probab=99.77 E-value=2.3e-16 Score=175.65 Aligned_cols=348 Identities=11% Similarity=0.117 Sum_probs=208.6
Q ss_pred CChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHH
Q 010125 104 GSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLN 183 (517)
Q Consensus 104 ~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~ 183 (517)
..+|..+.+.+...+..... +.+..++.+.+++|+++.+|++.+. ....++++|+++++..++.+..+
T Consensus 709 ~ppPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~----~e~IIvt~Gs~elL~lll~aLl~---- 776 (1082)
T PLN02672 709 LPVPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDS----CTEFVYGDTSLALFNKLVLCCVQ---- 776 (1082)
T ss_pred CCCCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCC----CCEEEEeCCHHHHHHHHHHHHcC----
Confidence 33455566666655433221 2223456789999999999987541 01466666665555444444332
Q ss_pred HhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccC-Cc
Q 010125 184 KIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGT-TA 262 (517)
Q Consensus 184 ~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gt-t~ 262 (517)
+++.|++..++++.+..+++..|. +++.||+++++++.+|++.|++++++.++ + +|+++.++ ||
T Consensus 777 -------pGD~VLVp~PtY~~Y~~~a~~~Ga---~vv~Vpl~~e~gf~lD~d~Le~al~~~~~----~-~I~L~nPnhNP 841 (1082)
T PLN02672 777 -------EGGTLCFPAGSNGTYVSAAKFLKA---NFRRIPTKSSDGFKLTAKTLASTLETVKK----P-WVYISGPTINP 841 (1082)
T ss_pred -------CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccCCC----C-EEEEECcCCCC
Confidence 566788888999999999999999 99999997655789999999999864221 2 57777786 99
Q ss_pred cccc---cChhHHHHHHHHhCCeEEcccccccccccCcc-----ccccccCCCC---C-Ce-eeeccccccC-CCCcceE
Q 010125 263 ITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPE-----FRHFIDGVEG---A-DS-FSLNAHKWFF-ATLDCCC 328 (517)
Q Consensus 263 ~G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~-----~~~~~~g~~~---a-Ds-i~~~~hK~l~-~p~~~g~ 328 (517)
||.+ +.+++|+++|++||+++++|.+|+...+..+. .......... . .+ +..++.|.++ ..+.+|+
T Consensus 842 TG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGy 921 (1082)
T PLN02672 842 TGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGF 921 (1082)
T ss_pred cCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHhee
Confidence 9998 45788889999999999999999765543211 1111111111 1 13 3447886554 5588999
Q ss_pred EEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc------HHHHHHHHHHHHHHHHH
Q 010125 329 LWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG------VANLRHFLRSHVNMAKL 402 (517)
Q Consensus 329 l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g------~~g~~~~i~~~~~~a~~ 402 (517)
++..++... +.+.....+... .....+.+..++..+. .+.+.+..+...+++++
T Consensus 922 lIap~~eLi-~~l~~~~~~s~~-------------------~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~ 981 (1082)
T PLN02672 922 LALNDSVLI-DAFHSAPGLSRP-------------------HSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAER 981 (1082)
T ss_pred EEeCCHHHH-HHHHHhhhhcCC-------------------CcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHH
Confidence 988655332 223211111000 0001122222222121 23455666677888999
Q ss_pred HHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccch-HHHHHHHHHHHHHHHHhc-CcEEEeeeeECCE
Q 010125 403 FERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSE-EEQINEFNRELLESINAS-GKAYMTHAVLGGI 480 (517)
Q Consensus 403 l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~g~ 480 (517)
+.+.|++. ++++. +|+.+++.|...+... ... +.....+ .........++.+.|.++ |+++.++..+...
T Consensus 982 L~e~L~~~-Gi~v~-~PeGGFfLwl~l~~~l-~~~-----~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~ 1053 (1082)
T PLN02672 982 LKETLEAC-GWDVL-EPQGGISMVAKPSAYL-GKT-----VKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIP 1053 (1082)
T ss_pred HHHHHHHC-CCeEe-cCCcEEEEEEEccccc-ccc-----ccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCC
Confidence 99999887 78765 6776766664321100 000 0000000 000001134677777765 6555444333345
Q ss_pred eEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 481 YAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 481 ~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
.++|++++ +++++++++++.|++..+
T Consensus 1054 g~~RIsfa---~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1054 GYCRFSFA---LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred CeEEEEec---CCHHHHHHHHHHHHHHHH
Confidence 79999985 367799999999988654
No 202
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=3.6e-16 Score=160.69 Aligned_cols=318 Identities=11% Similarity=0.050 Sum_probs=198.8
Q ss_pred HHHHHHHHHhccccc--ccccccChhhHHHHHHHHHHHHHHcC----CCcccccCCCCceEEcCCchHHHHHHHHHHHHH
Q 010125 107 AGFLGEMLSSGFNIV--GFNWISSPAATELENIVMDWLGQMLK----LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDR 180 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~--~~~~~~sp~~~~lE~~v~~~l~~l~g----~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~ 180 (517)
|..+.+.+...++.+ ...|. .++..++.+.+++|+.+..| ++++ ++++|+|+++++..++.+....
T Consensus 43 ~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~-------~I~it~Ga~~al~~~~~~~~~~ 114 (374)
T PRK02610 43 PPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPA-------NISVGNGSDELIRSLLIATCLG 114 (374)
T ss_pred CHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHH-------HEEEcCChHHHHHHHHHHHcCC
Confidence 344555555544432 23453 35778899999999987653 3433 6899999999886555543221
Q ss_pred HHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccC
Q 010125 181 VLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGT 260 (517)
Q Consensus 181 ~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gt 260 (517)
++..|++.++++..+..+++..|+ +++.+|++. +++.+|+++|++++++.. ...+.+|+++.++
T Consensus 115 ----------g~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~-~~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~ 178 (374)
T PRK02610 115 ----------GEGSILVAEPTFSMYGILAQTLGI---PVVRVGRDP-ETFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPN 178 (374)
T ss_pred ----------CCCeEEEcCCChHHHHHHHHHcCC---EEEEecCCc-ccCCCCHHHHHHHHHhhc--CCCceEEEEeCCC
Confidence 223588888999999999999999 999999874 357999999999986411 1124477777899
Q ss_pred CccccccChhHHHHHHH-HhCCeEEcccccccccccCccccccccCCCCC-C-eeeeccccccC-CCCcceEEEEeCchh
Q 010125 261 TAITAVDPLKPLCDVAK-QFGIWVHVDAAYAGSACICPEFRHFIDGVEGA-D-SFSLNAHKWFF-ATLDCCCLWVKDPRA 336 (517)
Q Consensus 261 t~~G~idpl~eI~~i~~-~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~a-D-si~~~~hK~l~-~p~~~g~l~~~~~~~ 336 (517)
||||.+-+.+++.++.+ .+|+|+++|.+|..+.... . ...+... . .+..++.|.++ ....+|+++. ++..
T Consensus 179 NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~-~----~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~-~~~l 252 (374)
T PRK02610 179 SPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTT-L----VGELAQHPNWVILRTFSKAFRLAAHRVGYAIG-HPEL 252 (374)
T ss_pred CCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccc-h----HHHHhcCCCEEEEEecchhccCcccceeeeec-CHHH
Confidence 99999977666665543 2489999999997653211 1 1111111 2 45677999995 6688998876 3333
Q ss_pred HHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010125 337 LVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEI 415 (517)
Q Consensus 337 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l 415 (517)
. +.+.... +. +. ...+...++...++ .+.+.+.+++..+.++.+.+.|++++++.+
T Consensus 253 ~-~~l~~~~-~~---------------~~------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 309 (374)
T PRK02610 253 I-AVLEKVR-LP---------------YN------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRV 309 (374)
T ss_pred H-HHHHHhc-CC---------------CC------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEe
Confidence 2 2332111 00 00 01222233333332 234445555556667778888888878775
Q ss_pred ecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHH
Q 010125 416 VFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKR 495 (517)
Q Consensus 416 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~ 495 (517)
. +...+.+.+++... .....+.+.+.+.|+.+.. +..++|++++. .+
T Consensus 310 ~-p~~g~f~~~~l~~~-----------------------~~~~~~~~~l~~~gi~v~~-----~~~~lRls~~~----~~ 356 (374)
T PRK02610 310 W-PSAANFLYLRLSQD-----------------------AALAALHQALKAQGTLVRH-----TGGGLRITIGT----PE 356 (374)
T ss_pred C-CCcceEEEEeCCCC-----------------------CCHHHHHHHHHHCCEEEEe-----CCCeEEEeCCC----HH
Confidence 3 44445445554321 0124566667777865432 23589999853 45
Q ss_pred HHHHHHHHHHHHHHH
Q 010125 496 HVVVAWTVVQQHLEA 510 (517)
Q Consensus 496 di~~l~~~l~~~~~~ 510 (517)
++++++++|+++.+.
T Consensus 357 ~~~~~l~~l~~~l~~ 371 (374)
T PRK02610 357 ENQRTLERLQAALTQ 371 (374)
T ss_pred HHHHHHHHHHHHHhh
Confidence 789999888876554
No 203
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=2.1e-16 Score=162.89 Aligned_cols=221 Identities=17% Similarity=0.185 Sum_probs=154.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
...|...++|+. ++++.|.+ ..+++++|++|+..++.+... +++.|+++...|.+.
T Consensus 61 ~~~p~~~~le~~----lA~l~g~~---------~~i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~ 116 (398)
T PRK08249 61 NTNPTVQAFEEK----VRILEGAE---------AATAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGT 116 (398)
T ss_pred CCChHHHHHHHH----HHHHhCCC---------eEEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHH
Confidence 455666666654 66666654 357788888888777655422 566788888999765
Q ss_pred HH----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC
Q 010125 206 QK----AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 281 (517)
Q Consensus 206 ~k----aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi 281 (517)
.. .+...|+ +++.++ ..|+++++++|+++++ +|+++.+++++|.+-|+++|+++|++||+
T Consensus 117 ~~~~~~~~~~~Gi---~v~~vd-------~~d~e~l~~~i~~~tk------lV~ie~p~NPtg~v~dl~~I~~la~~~gi 180 (398)
T PRK08249 117 NKIFTEFLPRMGV---DVTLCE-------TGDHEQIEAEIAKGCD------LLYLETPTNPTLKIVDIERLAAAAKKVGA 180 (398)
T ss_pred HHHHHHHHhhCCe---EEEEcC-------CCCHHHHHHhcCCCCe------EEEEECCCCCCCccCCHHHHHHHHHHcCC
Confidence 43 3456677 776654 2589999999976543 78888999999999999999999999999
Q ss_pred eEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc-ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 282 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD-CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
+++||++|+.+....+ . ..++|.++.+++|+++.+.. .|.+++.+++...+..... .
T Consensus 181 ~livD~t~a~~~~~~~----l---~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~-------------- 238 (398)
T PRK08249 181 LVVVDNTFATPINQNP----L---ALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-E-------------- 238 (398)
T ss_pred EEEEECCcCccccCCc----h---hhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-H--------------
Confidence 9999999986543211 1 12789999999999986542 2334444444322211100 0
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
..+-.......|.+++ +.+.+..++++..++++.+.+.|++.|.++-+
T Consensus 239 ------~~g~~~s~~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V 286 (398)
T PRK08249 239 ------INGATMDPMSAYLILR--GMKTLKLRVRQQQESAMALAKYLQTHPKVEAV 286 (398)
T ss_pred ------hcCCCCCHHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 0111234556676665 56778889999999999999999999887643
No 204
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.77 E-value=1.4e-16 Score=170.69 Aligned_cols=316 Identities=12% Similarity=0.118 Sum_probs=199.3
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
+..+..++.||.+.++ ++++|+|.+|..++.++.. +++.|++...+|-|+..++.+.|+
T Consensus 199 eAe~~AA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~haLilsga-- 257 (714)
T PRK15400 199 EAEEYIARVFNADRSY--------MVTNGTSTANKIVGMYSAP-----------AGSTVLIDRNCHKSLTHLMMMSDV-- 257 (714)
T ss_pred HHHHHHHHHhCCCcEE--------EEeCchHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC--
Confidence 3448899999999875 8888889999877776543 677899999999999999999999
Q ss_pred CCEEEEecCCCCC---cccC-----HHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccc
Q 010125 217 KNFRAIKTTKSSS---YGLS-----PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 288 (517)
Q Consensus 217 ~~v~~vp~d~~~~---~~~d-----~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA 288 (517)
..++++...... +.++ .+.++++|++.... .+|+.+++|.+| ..|.+-++++|+++|+.++ +|||.|
T Consensus 258 -~PVYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~a-k~p~~~vit~pT-YdG~~yd~~~I~~~~~~~~--ilvDEA 332 (714)
T PRK15400 258 -TPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNA-TWPVHAVITNST-YDGLLYNTDFIKKTLDVKS--IHFDSA 332 (714)
T ss_pred -eEEEecccccccCCccCCCccccCHHHHHHHHHhCccc-cCccEEEEECCC-CccEecCHHHHHHHhCCCC--EEEEcc
Confidence 899887654221 2345 89999999876532 467788888885 6899999999999999887 799999
Q ss_pred cccccccCccccccccCC-CCC---C--eeeeccccccCCCCcceEEEEeCc---hhHHhhhcCCccccCCccccccccc
Q 010125 289 YAGSACICPEFRHFIDGV-EGA---D--SFSLNAHKWFFATLDCCCLWVKDP---RALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 289 ~g~~~~~~~~~~~~~~g~-~~a---D--si~~~~hK~l~~p~~~g~l~~~~~---~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
||+.+.+.+.++... .+ .++ | .++-|.||.|.+--.++++.++.. +.+.+++.
T Consensus 333 wgah~~F~p~~~~~s-am~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~----------------- 394 (714)
T PRK15400 333 WVPYTNFSPIYEGKC-GMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYM----------------- 394 (714)
T ss_pred chhhhccCcccCCcC-hhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHH-----------------
Confidence 999887777554211 12 244 5 889999999988777777777542 11122210
Q ss_pred cCCCccccCCCCCCchHHHHHH----HHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecCCCe-eEEEEE
Q 010125 360 DYKDWQITLSRRFRSLKLWFVI----RNY-GVANLRHFLRSHVNMAKLFERLVSGDKR------FEIVFPCHF-AVVCFR 427 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l----~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~------~~l~~~~~~-~~v~f~ 427 (517)
..+.+. -...+.+++ +.+ |..| ++.+++.++++..+++.|.++++ |+++.+... ..-||.
T Consensus 395 -----m~~STS--PsY~l~ASLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~ 466 (714)
T PRK15400 395 -----MHTTTS--PHYGIVASTETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWP 466 (714)
T ss_pred -----HHcCCC--cHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcc
Confidence 001111 112222222 222 2223 55778888889999999988877 777643210 111333
Q ss_pred ecCCCc-chhhhh-----hhhhccccch---------HHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCC
Q 010125 428 VSPSPV-LMDKLK-----TKYVNCLLSE---------EEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLT 492 (517)
Q Consensus 428 ~~~~~~-~~~~~~-----~~~~~~~~~~---------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t 492 (517)
+.|..- .++... .-||.+.... .++...-...+.+.|.+.|+. +..+ +...+=+.+ ++..
T Consensus 467 ~~p~~~whgf~~~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~gI~-~E~~---d~~~iLfl~-s~g~ 541 (714)
T PRK15400 467 LRSDSTWHGFKNIDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHGIV-VEKT---GPYNLLFLF-SIGI 541 (714)
T ss_pred cCccccccCcccccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcCCE-EEec---CCCeEEEEe-CCCC
Confidence 322100 000000 0011111110 001112234556667677763 3332 233444544 5778
Q ss_pred cHHHHHHHHHHHHHHHH
Q 010125 493 EKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 493 ~~~di~~l~~~l~~~~~ 509 (517)
+++++++++++|.+.-+
T Consensus 542 t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 542 DKTKALSLLRALTDFKR 558 (714)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 89999999999988744
No 205
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=3.7e-16 Score=160.29 Aligned_cols=295 Identities=11% Similarity=0.043 Sum_probs=190.5
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
...+++++++| +|++++ ..++|+|+++++..++.+..+ +++.|++.+++|..+...+.
T Consensus 69 ~~~Lr~~ia~~----~~~~~~-------~I~it~G~~~~l~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~ 126 (369)
T PRK08153 69 NHDLRHALAAH----HGVAPE-------NIMVGEGIDGLLGLIVRLYVE-----------PGDPVVTSLGAYPTFNYHVA 126 (369)
T ss_pred cHHHHHHHHHH----hCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEECCCcchHHHHHHH
Confidence 45566555554 577654 689999988877655544322 56778899999999998889
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh--CCeEEcccc
Q 010125 211 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAA 288 (517)
Q Consensus 211 ~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~--gi~lhvDaA 288 (517)
..|. +++.+|.+.+ .+|++++++.+.... +.+|+++.++||||.+-+.+++.++++.+ |+|+++|.+
T Consensus 127 ~~g~---~~~~vp~~~~---~~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~ 195 (369)
T PRK08153 127 GFGG---RLVTVPYRDD---REDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEA 195 (369)
T ss_pred HcCC---eEEEeeCCCC---CCCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc
Confidence 9999 9999998642 589998887764321 23677788999999999988888887654 899999999
Q ss_pred cccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCcccc
Q 010125 289 YAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQIT 367 (517)
Q Consensus 289 ~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 367 (517)
|+.+... ..... +.....--.+..++.|.++ ....+|+++.. ++. .+.+.....+ ++
T Consensus 196 y~~~~~~-~~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~-~~~l~~~~~~----------------~~-- 253 (369)
T PRK08153 196 YCETAPA-GAAPP-IDTDDPNVIRMRTFSKAYGLAGARVGYAIGA-PGT-IKAFDKVRNH----------------FG-- 253 (369)
T ss_pred hhhhcCc-ccchh-hhhcCCCEEEEecchHhccCcchheeeeecC-HHH-HHHHHHhhcC----------------CC--
Confidence 9754321 11111 1111111255667999997 55677888764 322 2222211100 00
Q ss_pred CCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccc
Q 010125 368 LSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCL 446 (517)
Q Consensus 368 ~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~ 446 (517)
...+..+++...+. .+.+++..+...++++++.+.|++. ++... +...+++.+.....
T Consensus 254 ----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~--------------- 312 (369)
T PRK08153 254 ----MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD--------------- 312 (369)
T ss_pred ----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC---------------
Confidence 12334444444443 3445666677778888888888876 66644 44555554444221
Q ss_pred cchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 447 LSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 447 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
.....++.++|.+.|+.+..+....+..++|+++. +++|+++++++|+++.+.+.
T Consensus 313 -------~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~----~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 313 -------GAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG----PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred -------cccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHHHhh
Confidence 12346788888888875533333234569999985 57799999999999876554
No 206
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.77 E-value=1.9e-16 Score=160.19 Aligned_cols=371 Identities=14% Similarity=0.104 Sum_probs=192.8
Q ss_pred CCChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHH-HHHh--ccccccccc--c
Q 010125 52 QVEPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGE-MLSS--GFNIVGFNW--I 126 (517)
Q Consensus 52 ~~~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~l~~--~~n~~~~~~--~ 126 (517)
..-|++++..-+..+|+ +.+..++++++.++...+.. ...|+|--..+--.|+.+.+ .+.. .+... ..| +
T Consensus 29 ~~IP~~i~~~~~~~lp~-~~sE~e~~r~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaY-tPYQpE 103 (429)
T PF02347_consen 29 SDIPEEIRLKKPLNLPE-PLSEYELLRHLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTAY-TPYQPE 103 (429)
T ss_dssp TTS-GGG-SS-----------HHHHHHHHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS--STTSGG
T ss_pred hhCCHhhcCCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhccC-CCCCcH
Confidence 34477776554566776 38999999999998766654 34465543334455666666 3321 12211 122 3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
.|.+.-+.-.+...+++++.|++.. +..+..++|.+--.++++.|.. ++ .+..|++++..|+...
T Consensus 104 isQG~Lq~lfe~Qs~i~eLTGmdva-------NaSlyd~atA~aEa~~ma~r~~--~~------~~~~vlv~~~~hP~~~ 168 (429)
T PF02347_consen 104 ISQGRLQALFEYQSMICELTGMDVA-------NASLYDGATAAAEAMLMAVRAT--KR------KRNKVLVPESLHPQTR 168 (429)
T ss_dssp GBHHHHHHHHHHHHHHHHHHTSSEE--------SEBSSCCHHHHHHHHHHHHHH--TT---------EEEEETTS-CHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCcc-------CCCCCChhHHHHHHHHHHHHhc--cc------CCcEEEEcCCcChhhH
Confidence 3556666666777999999999865 4567777775544333433332 10 2346899999998877
Q ss_pred HHHH----HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KAAQ----IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 kaa~----~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
..++ ..|+ +++.+|.+. ++..| .++ ...|+++.|++ .|.++++++|++++|++|..
T Consensus 169 ~v~~t~a~~~g~---~iv~~~~~~--~~~~d--------~~~------~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal 228 (429)
T PF02347_consen 169 AVLRTYAAPLGI---EIVEVPLDE--DGTTD--------DDD------TAAVMVQNPNT-FGVFEDIKEIADIAHAAGAL 228 (429)
T ss_dssp HHHHHHCCHCCE---EEEEE-BBT--TCSB---------STT------EEEEEEESS-T-TSB--THHHHHHHHHHTT-E
T ss_pred HHHHHhhhhCCe---EEEEecccc--cCCcc--------ccC------eEEEEeecCCC-CceEeeHHHHHHHHHHcCCE
Confidence 6443 4577 899999875 34556 333 35889999886 69999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-----cceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-----DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-----~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
+++ +|-............. +||.+ +.-||.|+.|. ++|++-+|+. +.+. .|..+.+...+..+
T Consensus 229 ~~~-~ad~~aL~~l~~Pge~-----GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~--l~r~---lPGRiVG~t~D~~G 296 (429)
T PF02347_consen 229 VIV-GADPNALGGLKSPGEY-----GADIV-VGEHQTFGIPMGFGGPGAGFFAVRED--LVRQ---LPGRIVGQTKDADG 296 (429)
T ss_dssp EEE-CGGCCGCCTC--GGGG-----T-SEE-EECCTTTT---CCC-S--EEEEE-GG--GGGG---S-S-EEEEEEBCCC
T ss_pred EEE-ecCHHHHhCcCChhhc-----CccEE-eeCCCCCcccCCCCCCCeeeEEEhhh--hhhh---CCCceecccccccc
Confidence 887 6654443333222222 89999 66699998774 4777888766 2222 24444322211112
Q ss_pred cccCCCccccC----CCCC------------CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 010125 358 VVDYKDWQITL----SRRF------------RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHF 421 (517)
Q Consensus 358 ~~~~~~~~~~~----sr~~------------~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~ 421 (517)
...+. .+++. -||- .++..+..+..+|.+|++++-++...+|.|+++.|++..++.+ ..+.+
T Consensus 297 ~~~~~-ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~-~~~~f 374 (429)
T PF02347_consen 297 KRAFV-LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF-DNPFF 374 (429)
T ss_dssp SCCEE-EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS-SSSSB
T ss_pred cceee-eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-CCCCc
Confidence 11110 11111 1221 1234455667789999999999999999999999998733332 23333
Q ss_pred eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHH
Q 010125 422 AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAW 501 (517)
Q Consensus 422 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~ 501 (517)
.-......+. .. ..++.++....| +.. .... ...+-+|++. .++++|||+++
T Consensus 375 ~e~v~~~~~~----------------------~~-~~~l~~~~~~~g-l~~--~~~~-~~~~li~~TE-~~t~edid~lv 426 (429)
T PF02347_consen 375 FEFVVVFSKD----------------------KE-VEELLKRGIEGG-LNL--RYPD-DGALLICVTE-TRTKEDIDRLV 426 (429)
T ss_dssp SSEEEEESS-----------------------HH-HHHHHHTT-----EEE--GGG--SSEEEEE--T-T--HHHHHHHH
T ss_pred eeeeeecCCc----------------------HH-HHHHHHHHHhcC-CCc--cccC-CCeEEEEccC-CCCHHHHHHHH
Confidence 3222222221 11 223666655556 222 1122 2278899864 66778999999
Q ss_pred HHH
Q 010125 502 TVV 504 (517)
Q Consensus 502 ~~l 504 (517)
+++
T Consensus 427 ~~f 429 (429)
T PF02347_consen 427 EAF 429 (429)
T ss_dssp H--
T ss_pred hcC
Confidence 864
No 207
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.77 E-value=4.9e-16 Score=166.51 Aligned_cols=315 Identities=13% Similarity=0.115 Sum_probs=198.8
Q ss_pred HHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCC
Q 010125 138 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVK 217 (517)
Q Consensus 138 v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~ 217 (517)
..+..++.||.+.++ ++++|+|.+|..++.++.. +++.|++...+|-|+..++.+.|+
T Consensus 200 Ae~~aA~~fgAd~ty--------fvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~~aLilsga--- 257 (713)
T PRK15399 200 AEEYIARTFGAEQSY--------IVTNGTSTSNKIVGMYAAP-----------AGSTLLIDRNCHKSLAHLLMMSDV--- 257 (713)
T ss_pred HHHHHHHHhCCCcEE--------EEeCChHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---
Confidence 448889999998875 8888889999887777643 677899999999999999999999
Q ss_pred CEEEEecCCCCC---cccCH-----HHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE-Ecccc
Q 010125 218 NFRAIKTTKSSS---YGLSP-----DSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV-HVDAA 288 (517)
Q Consensus 218 ~v~~vp~d~~~~---~~~d~-----~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l-hvDaA 288 (517)
..++++...... +.++. +.++++|++.... .+|..+++|.+| ..|.+-++++|+++| |+.+ |||.|
T Consensus 258 ~PVYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~-~~p~~vvit~pT-YdGi~yd~~~I~~~~---g~~~ilvDEA 332 (713)
T PRK15399 258 VPIWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQA-QWPVHAVITNST-YDGLLYNTDWIKQTL---DVPSIHFDSA 332 (713)
T ss_pred eeEEecccccccCCcCCCChhhccHHHHHHHHHhCCCc-CCceEEEEECCC-CCceeeCHHHHHHHh---CCCEEEEecc
Confidence 899887553221 24555 9999999876533 467889999885 689999999999999 6766 89999
Q ss_pred cccccccCccccc--cccCCCCCCee---eeccccccCCCCcceEEEEeCc---hhHHhhhcCCccccCCcccccccccc
Q 010125 289 YAGSACICPEFRH--FIDGVEGADSF---SLNAHKWFFATLDCCCLWVKDP---RALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 289 ~g~~~~~~~~~~~--~~~g~~~aDsi---~~~~hK~l~~p~~~g~l~~~~~---~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
||+.+.+.+.++. .+.+..++|.+ +-|.||.|.+--.++++.++.. ..+.+++. -
T Consensus 333 hgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~------m----------- 395 (713)
T PRK15399 333 WVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFM------M----------- 395 (713)
T ss_pred chhhhhcCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHH------H-----------
Confidence 9998877764442 22222357877 9999999998888999998653 11222221 0
Q ss_pred CCCccccCCCCCCchHHHHHH----HHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCC------eEEecCCCe-eEEEEEe
Q 010125 361 YKDWQITLSRRFRSLKLWFVI----RNY-GVANLRHFLRSHVNMAKLFERLVSGDKR------FEIVFPCHF-AVVCFRV 428 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l----~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~------~~l~~~~~~-~~v~f~~ 428 (517)
.+.+. -...+.+++ +.+ |..| ++++++..+++..+++.|.++.+ |+++.+... ..-||.+
T Consensus 396 -----~~STS--PsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l 467 (713)
T PRK15399 396 -----HTSTS--PSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPV 467 (713)
T ss_pred -----HcCCC--cHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceec
Confidence 01111 112222222 112 2233 45777888888889998887766 666643211 1113333
Q ss_pred cCCC-cchhhhh-----hhhhccccchH---------HHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCc
Q 010125 429 SPSP-VLMDKLK-----TKYVNCLLSEE---------EQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTE 493 (517)
Q Consensus 429 ~~~~-~~~~~~~-----~~~~~~~~~~~---------~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~ 493 (517)
.|.. -.++... .-||.+..... +........+.+.|.+.|+. +..+ +...+=+.+ ++..+
T Consensus 468 ~p~~~whgf~~~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~gI~-~E~~---d~~~vL~l~-s~g~t 542 (713)
T PRK15399 468 APGEQWHGFKDADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERGIV-VEKT---GPYNLLFLF-SIGID 542 (713)
T ss_pred CCCcccccccccccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcCCE-EEec---CCCeEEEEe-CCCCC
Confidence 2210 0000000 00111111100 01112234566667677763 3332 223344444 56778
Q ss_pred HHHHHHHHHHHHHHHH
Q 010125 494 KRHVVVAWTVVQQHLE 509 (517)
Q Consensus 494 ~~di~~l~~~l~~~~~ 509 (517)
++++++++++|.+..+
T Consensus 543 ~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 543 KTKAMGLLRGLTEFKR 558 (713)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999987744
No 208
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.77 E-value=1.6e-16 Score=162.45 Aligned_cols=307 Identities=13% Similarity=0.094 Sum_probs=196.4
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+...+... ..| ..++..++.+.+ ++.+|++++ ..++|+|+++++..++.+..+
T Consensus 44 ~~~v~~a~~~~~~~~-~~Y-p~~g~~~Lr~ai----a~~~~~~~~-------~I~vt~Gs~e~i~~~~~~l~~------- 103 (366)
T PRK01533 44 SPRVLDELQKSWLDH-ALY-PDGGATTLRQTI----ANKLHVKME-------QVLCGSGLDEVIQIISRAVLK------- 103 (366)
T ss_pred CHHHHHHHHHHHHhc-CcC-CCCCHHHHHHHH----HHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-------
Confidence 334444454443321 123 234455555554 445577765 789999999998776665432
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|++.++++..+...++..|+ +++.||++ ++.+|+++|++++++.++ +|+++.++|+||.+
T Consensus 104 ----~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~---~~~~d~~~l~~~~~~~~~------~v~i~~P~NPTG~~ 167 (366)
T PRK01533 104 ----AGDNIVTAGATFPQYRHHAIIEGC---EVKEVALN---NGVYDLDEISSVVDNDTK------IVWICNPNNPTGTY 167 (366)
T ss_pred ----CCCEEEEcCCcHHHHHHHHHHcCC---EEEEeecC---CCCcCHHHHHHHhCcCCc------EEEEeCCCCCCCCC
Confidence 556788899999999999999999 99999986 347999999998865443 67778899999999
Q ss_pred cChhHHHHHH---HHhCCeEEcccccccccccCccccccccCCCC--CCeeeeccccccC-CCCcceEEEEeCchhHHhh
Q 010125 267 DPLKPLCDVA---KQFGIWVHVDAAYAGSACICPEFRHFIDGVEG--ADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSS 340 (517)
Q Consensus 267 dpl~eI~~i~---~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~--aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~ 340 (517)
-+.+++.+++ ++++ ++++|.+|..+... ......+..+.. --.+.-++.|.++ ....+|+++.. +... +.
T Consensus 168 ~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~-~~~~-~~ 243 (366)
T PRK01533 168 VNDRKLTQFIEGISENT-LIVIDEAYYEYVTA-KDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH-EELI-EK 243 (366)
T ss_pred cCHHHHHHHHHhCCCCC-EEEEEccHHHhhcc-ccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC-HHHH-HH
Confidence 8766665555 4555 67789999654321 111111111212 2256667999997 55777877653 3322 22
Q ss_pred hcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 010125 341 LSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC 419 (517)
Q Consensus 341 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~ 419 (517)
+.... . ......+...++...+. .+..++..+...+.++++.+.++.. ++++. ++
T Consensus 244 l~~~~----~------------------~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~ 299 (366)
T PRK01533 244 LNVVR----L------------------PFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY-QS 299 (366)
T ss_pred HHHhc----C------------------CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC-CC
Confidence 21100 0 00113344455555553 3344555666667788888888776 67754 56
Q ss_pred CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHH
Q 010125 420 HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVV 499 (517)
Q Consensus 420 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~ 499 (517)
+.+.+.+++. . ..++.+.|.++|+.... + ..++|++++ +.++.++
T Consensus 300 ~~nf~~~~~~-~-------------------------~~~~~~~l~~~GI~Vr~---~--~~~iRis~~----~~~~~~~ 344 (366)
T PRK01533 300 QTNFIFLPVE-N-------------------------GGEIYEACAHAGFIIRP---F--PNGVRITVG----TREQNEG 344 (366)
T ss_pred cCcEEEEeCC-C-------------------------HHHHHHHHHHCCcEEcc---C--CCceEEeCC----CHHHHHH
Confidence 7777777652 2 13567777788976543 2 257999985 5679999
Q ss_pred HHHHHHHHHHHHH
Q 010125 500 AWTVVQQHLEAFQ 512 (517)
Q Consensus 500 l~~~l~~~~~~l~ 512 (517)
++++|+++.+..+
T Consensus 345 l~~al~~~~~~~~ 357 (366)
T PRK01533 345 VISVLQQHFENKK 357 (366)
T ss_pred HHHHHHHHHHhcc
Confidence 9999998865544
No 209
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=1.8e-16 Score=164.62 Aligned_cols=241 Identities=15% Similarity=0.184 Sum_probs=158.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH--
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA-- 204 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s-- 204 (517)
..|....+|+. ++++.|.+ ..++++||+.|+..++.+... +++.|+++...|..
T Consensus 62 ~~p~~~~Le~~----lA~leg~~---------~al~~~sG~~Ai~~al~~ll~-----------~GD~Vlv~~~~y~~t~ 117 (431)
T PRK08248 62 MNPTTDVFEKR----IAALEGGI---------GALAVSSGQAAITYSILNIAS-----------AGDEIVSSSSLYGGTY 117 (431)
T ss_pred CCchHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCchhhHH
Confidence 45666666654 66666643 468999999998877765422 55678888877754
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 205 --LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 205 --~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
+...++..|+ +++.|+. .|+++|+++|+++++ +|+++.++|++|.+-|+++|+++|++||++
T Consensus 118 ~~~~~~~~~~Gv---~v~~vd~-------~d~e~l~~ai~~~tk------lV~l~sp~NPtG~v~di~~I~~la~~~gi~ 181 (431)
T PRK08248 118 NLFAHTLPKLGI---TVKFVDP-------SDPENFEAAITDKTK------ALFAETIGNPKGDVLDIEAVAAIAHEHGIP 181 (431)
T ss_pred HHHHHHHHhCCE---EEEEECC-------CCHHHHHHhcCCCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3345667888 8888875 278999999876443 788889999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhH-Hh------hhcCCccccCCcccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRAL-VS------SLSTNPEYLKNKATE 354 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~-~~------~~~~~~~yl~~~~~~ 354 (517)
++||++|+.+....+ .. .++|.++.+.|||++.|- ..|.+++.+.... .. .....+.|-..-...
T Consensus 182 vIvD~t~a~~~~~~p-l~------~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (431)
T PRK08248 182 LIVDNTFASPYLLRP-IE------HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTD 254 (431)
T ss_pred EEEeCCCCccccCCh-hH------cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhh
Confidence 999999975443222 11 279999999999998874 3666666433211 00 000001110000000
Q ss_pred ccc--c---ccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 355 SMQ--V---VDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 355 ~~~--~---~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
..+ . .....+....+-...+...|..++ |.+.+..+++++.++|..+.+.|+++|.++-+
T Consensus 255 ~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V 319 (431)
T PRK08248 255 AVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVEWV 319 (431)
T ss_pred hhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceE
Confidence 000 0 000000111233345556676654 67788899999999999999999999987643
No 210
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=1.5e-16 Score=163.88 Aligned_cols=217 Identities=18% Similarity=0.219 Sum_probs=152.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH-
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL- 205 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~- 205 (517)
..|....+|+ .++++.|.+. .+++++|+.|+..++. ... +++.|++++..|.+.
T Consensus 52 ~~p~~~~le~----~lA~l~g~~~---------~v~~~sG~~ai~~~l~-~l~-----------~Gd~Vlv~~~~y~~~~ 106 (390)
T PRK08064 52 GNPTREALED----IIAELEGGTK---------GFAFASGMAAISTAFL-LLS-----------KGDHVLISEDVYGGTY 106 (390)
T ss_pred CChhHHHHHH----HHHHHhCCCC---------eEEECCHHHHHHHHHH-HhC-----------CCCEEEEccCccchHH
Confidence 3455666664 5666677652 3666777777655543 211 455688888888643
Q ss_pred ---HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 206 ---QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 206 ---~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
.+.++..|+ +++.++.+ |+++++++++++++ +|+++.++|++|.+.|+++|+++|+++|++
T Consensus 107 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~tk------lV~l~~p~NptG~~~dl~~I~~la~~~g~~ 170 (390)
T PRK08064 107 RMITEVLSRFGI---EHTFVDMT-------NLEEVAQNIKPNTK------LFYVETPSNPLLKVTDIRGVVKLAKAIGCL 170 (390)
T ss_pred HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCCCce------EEEEECCCCCCcEeccHHHHHHHHHHcCCE
Confidence 345566888 89998753 68899998876553 888999999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
++||++|+.+....+. . -++|.++.++|||+++|.+ .|++++++++.... +.. +..
T Consensus 171 vvvD~a~~~~~~~~~~--~-----~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~-l~~----~~~---------- 228 (390)
T PRK08064 171 TFVDNTFLTPLLQKPL--D-----LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQK-LYF----LQN---------- 228 (390)
T ss_pred EEEECCCCcccccCch--h-----hCCcEEEeecceeccCCccceeEEEEeCCHHHHHH-HHH----HHH----------
Confidence 9999999776543221 1 1689999999999988866 58888876544322 210 000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
..+....+...|..+ .|...+..++++..+++..+.+.|++.|.+.
T Consensus 229 ------~~g~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~ 274 (390)
T PRK08064 229 ------SFGAVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQ 274 (390)
T ss_pred ------hcCCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 011112334556544 3556678899999999999999999988753
No 211
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=1.7e-16 Score=162.88 Aligned_cols=218 Identities=15% Similarity=0.135 Sum_probs=154.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
...|...++|+. +++++|.+ ..++++||+.|+..++.+... +++.|+++...|.+.
T Consensus 50 ~~np~~~~lE~~----lA~l~g~~---------~~l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~ 105 (385)
T PRK08574 50 EENPTLRPLEEA----LAKLEGGV---------DALAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTT 105 (385)
T ss_pred CCCccHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhH
Confidence 345666777755 55666654 457888999998877765432 566788899999887
Q ss_pred HHHHHH---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-hHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC
Q 010125 206 QKAAQI---VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINS-DVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 281 (517)
Q Consensus 206 ~kaa~~---~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~-~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi 281 (517)
...++. .|+ +++.++ +|+++|+++|++ ++ .+|++..+++++|.+-|+++|+++|++||+
T Consensus 106 ~~~~~~~~~~g~---~v~~~~--------~d~~~l~~~i~~~~t------klV~ie~p~NPtG~v~dl~~I~~la~~~gi 168 (385)
T PRK08574 106 LRLLKSLEKFGV---KVVLAY--------PSTEDIIEAIKEGRT------KLVFIETMTNPTLKVIDVPEVAKAAKELGA 168 (385)
T ss_pred HHHHHHhhccCc---EEEEEC--------CCHHHHHHhcCccCc------eEEEEECCCCCCCEecCHHHHHHHHHHcCC
Confidence 776643 355 565542 367889988875 43 377889999999999999999999999999
Q ss_pred eEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 282 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
++++|++|+.+....+ .. .++|.++.++||++++|-+ .|++++.+++...+.... ..++
T Consensus 169 ~livD~t~a~~~~~~~-l~------~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~-~~~~----------- 229 (385)
T PRK08574 169 ILVVDNTFATPLLYRP-LR------HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEW-RRRL----------- 229 (385)
T ss_pred EEEEECCCCccccCCh-hh------hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHH-HHhc-----------
Confidence 9999999976653221 11 2689999999999988754 465666665433221100 0010
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
+.....+..|.+++ |.+.+..++++..+++.++.+.|++.|.++
T Consensus 230 ---------g~~~~p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 230 ---------GTIMQPFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred ---------CCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 11123345565555 556788899999999999999999998875
No 212
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.76 E-value=3e-16 Score=163.12 Aligned_cols=238 Identities=14% Similarity=0.139 Sum_probs=157.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH-
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ- 206 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~- 206 (517)
+|....+|+ .++++.|.+ .++++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 62 ~p~~~~le~----~lA~l~g~~---------~al~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~~ 117 (427)
T PRK05994 62 NPTNAVLEE----RVAALEGGT---------AALAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSIN 117 (427)
T ss_pred CccHHHHHH----HHHHHhCCC---------cEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHHH
Confidence 455555554 566666654 368889999999877766532 5567888888887543
Q ss_pred ---HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 207 ---KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 207 ---kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
..+...|+ .++.++.+ |+++++++|+++++ +|+++.++|++|.+-|+++|+++|++||+++
T Consensus 118 ~~~~~~~~~G~---~v~~vd~~-------d~~~l~~ai~~~tk------lV~vesp~NptG~v~dl~~I~~la~~~gi~l 181 (427)
T PRK05994 118 QFGHAFKSFGW---QVRWADAD-------DPASFERAITPRTK------AIFIESIANPGGTVTDIAAIAEVAHRAGLPL 181 (427)
T ss_pred HHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCcCCe------EEEEECCCCCCCeecCHHHHHHHHHHcCCEE
Confidence 34566788 88888642 78999999876543 7888899999999999999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCCCc-ceEEEEeCch-hHHhhhcCCccccCCcccccccc--c
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD-CCCLWVKDPR-ALVSSLSTNPEYLKNKATESMQV--V 359 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~~~~~-~~~~~~~~~~~yl~~~~~~~~~~--~ 359 (517)
+||++|+.+...-+ .. .++|.++.++||+++.+-+ .|.+++.... .+. . .....++.......++. .
T Consensus 182 ivD~a~a~~~~~~p-l~------~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~-~-~k~~~~~~~~~~~~~~~~~~ 252 (427)
T PRK05994 182 IVDNTLASPYLIRP-IE------HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWS-K-SGKYPMLSEPRPEYHGLVLH 252 (427)
T ss_pred EEECCccccccCCc-cc------cCCcEEEEcCccccCCCCCcEEEEEEeCCccccc-c-ccccccccCCcchhhhhhHH
Confidence 99999986543221 11 2799999999999987653 4555553221 100 0 00001121110000000 0
Q ss_pred c-CC----------CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 360 D-YK----------DWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 360 ~-~~----------~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
+ +. ...-..+.....+..|..++ |.+.+..++++..+++.++.+.|++.|.++-+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~--~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v 318 (427)
T PRK05994 253 ETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT--GIETLPLRMQRHSDNALAVAEWLKGHPKVSWV 318 (427)
T ss_pred HHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0 00 00011233345566666665 66788999999999999999999999987543
No 213
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.76 E-value=6.2e-16 Score=165.90 Aligned_cols=232 Identities=13% Similarity=0.096 Sum_probs=162.4
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHH-HHHcCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKA-AQIVGID 215 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ka-a~~~G~g 215 (517)
+..+..+++||.+.++ ++++|+|.+|..++.++.. +++.|++...+|-|+..+ ..+.|+
T Consensus 178 eAq~~AA~~fgAd~ty--------FlvNGTS~gn~a~i~a~~~-----------~Gd~VLvdRN~HKSv~hgaLiLsGa- 237 (720)
T PRK13578 178 DAQKHAAKVFNADKTY--------FVLNGTSASNKVVTNALLT-----------PGDLVLFDRNNHKSNHHGALIQAGA- 237 (720)
T ss_pred HHHHHHHHHhCCCceE--------EEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHHcCC-
Confidence 3448899999998875 8889999999887776643 677899999999999996 788999
Q ss_pred CCCEEEEecCCCCC---cccCH-----HHHHHHHHHh-Hh--cCCcc-eEEEeeccCCccccccChhHHHHH-HHHhCCe
Q 010125 216 VKNFRAIKTTKSSS---YGLSP-----DSLMAQINSD-VE--VGLIP-LFLCATIGTTAITAVDPLKPLCDV-AKQFGIW 282 (517)
Q Consensus 216 ~~~v~~vp~d~~~~---~~~d~-----~~Le~~i~~~-~~--~g~~p-~~vv~t~gtt~~G~idpl~eI~~i-~~~~gi~ 282 (517)
..++++...+.. +.++. +.++++|++. .+ +..+| .++++|.+| ..|.+-++++|+++ |++++ .
T Consensus 238 --~PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pT-YdG~~ydi~~I~~~~~h~~~-~ 313 (720)
T PRK13578 238 --TPVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGT-YDGTIYNARQVVDKIGHLCD-Y 313 (720)
T ss_pred --eEEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCC-CcceeecHHHHHHHhhccCC-c
Confidence 888887654221 24565 4499999775 21 22345 578888776 57999999999999 78888 9
Q ss_pred EEcccccccccccCccccccc--cCCCCCC----eeeeccccccCCCCcceEEEEeCch-----------hHHhhhcCCc
Q 010125 283 VHVDAAYAGSACICPEFRHFI--DGVEGAD----SFSLNAHKWFFATLDCCCLWVKDPR-----------ALVSSLSTNP 345 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~--~g~~~aD----si~~~~hK~l~~p~~~g~l~~~~~~-----------~~~~~~~~~~ 345 (517)
+|||.|||+.+.+.+.++.+- ..-.++| .++-|.||+|.+--.++++.+++.. .+.+++.
T Consensus 314 llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~--- 390 (720)
T PRK13578 314 ILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFM--- 390 (720)
T ss_pred EEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHH---
Confidence 999999999988777543321 1123788 9999999999888888999887642 1222210
Q ss_pred cccCCccccccccccCCCccccCCCCCCchHHHHHHHH----h-cHHHHHHHHHHHHHHHHHHHHHH-hcCCCeEEec
Q 010125 346 EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRN----Y-GVANLRHFLRSHVNMAKLFERLV-SGDKRFEIVF 417 (517)
Q Consensus 346 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~----~-g~~g~~~~i~~~~~~a~~l~~~l-~~~~~~~l~~ 417 (517)
..+.+. -...+.+++.. + +..| ++.+++.++++..+++.| +.+++|+++.
T Consensus 391 -------------------m~qSTS--PsY~LmASLDva~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~ 446 (720)
T PRK13578 391 -------------------LHASTS--PFYPLFAALDVNAKMHEGESG-RRLWMECVKLGIEARKLILARCKLIRPFI 446 (720)
T ss_pred -------------------HHcCCC--hHHHHHHHHHHHHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecc
Confidence 001111 11222222221 1 2222 456777888888888888 7788888774
No 214
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.76 E-value=2.8e-16 Score=162.39 Aligned_cols=220 Identities=17% Similarity=0.205 Sum_probs=155.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH-
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL- 205 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~- 205 (517)
..|...++|+.+.++ .|.+ ..++++||+.|+..++.+... +++.|+++...|.+.
T Consensus 62 ~~p~~~~Le~~iA~~----~g~~---------~~l~~~sG~~Ai~~al~~ll~-----------~Gd~Vl~~~~~y~~~~ 117 (400)
T PRK06234 62 GNPTSTEVENKLALL----EGGE---------AAVVAASGMGAISSSLWSALK-----------AGDHVVASDTLYGCTF 117 (400)
T ss_pred CCccHHHHHHHHHHH----hCCC---------cEEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCccchHH
Confidence 667788888765544 4533 468899999998777654432 556788888877553
Q ss_pred ---HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh--C
Q 010125 206 ---QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF--G 280 (517)
Q Consensus 206 ---~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~--g 280 (517)
...++..|+ +++.++.+ |+++++++|+++++ +|+++.++|++|.+.|+++|+++|++| |
T Consensus 118 ~~~~~~~~~~G~---~v~~vd~~-------d~e~l~~~i~~~tk------lI~iesP~NPtG~v~dl~~I~~la~~~~~~ 181 (400)
T PRK06234 118 ALLNHGLTRYGV---EVTFVDTS-------NLEEVRNALKANTK------VVYLETPANPTLKVTDIKAISNIAHENNKE 181 (400)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHHhccCCe------EEEEECCCCCCCCcCCHHHHHHHHHhcCCC
Confidence 345577888 88888642 78999999976543 788899999999999999999999997 9
Q ss_pred CeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCC-ccccCCccccccc
Q 010125 281 IWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTN-PEYLKNKATESMQ 357 (517)
Q Consensus 281 i~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~-~~yl~~~~~~~~~ 357 (517)
+++++|++|+.+....+ . + .++|.++.+++|+++++-. .|+++.++ +.. +.+... ..++
T Consensus 182 i~livDea~~~~~~~~~-l-----~-~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~-~~l~~~~~~~~--------- 243 (400)
T PRK06234 182 CLVFVDNTFCTPYIQRP-L-----Q-LGADVVVHSATKYLNGHGDVIAGFVVGKE-EFI-NQVKLFGIKDM--------- 243 (400)
T ss_pred CEEEEECCCCchhcCCc-h-----h-hCCcEEEeeccccccCCCCceeEEEEecH-HHH-HHHHHHHHHHh---------
Confidence 99999999977654321 1 1 1689999999999987643 47766654 322 222110 0000
Q ss_pred cccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 358 VVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
.+....+...|..++ |.+.+..++++..++++++.+.|++.|.+.-+
T Consensus 244 ----------~g~~l~p~~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V 290 (400)
T PRK06234 244 ----------TGSVIGPFEAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKV 290 (400)
T ss_pred ----------cCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 011234455566655 45667789999999999999999998877533
No 215
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=4.7e-16 Score=159.15 Aligned_cols=290 Identities=10% Similarity=0.014 Sum_probs=186.8
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCC-eEEEeCCCCchHHHHHHHHcCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISK-LIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~-~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
++++.+++.+|++++ .+++|+|+++++..++.+... ++ ..|+++++++..+...++..|+
T Consensus 63 ~lr~~ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~~~~g~- 123 (364)
T PRK04781 63 GLRSALAALYGCAPE-------QLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCARLQNA- 123 (364)
T ss_pred HHHHHHHHHhCcChH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHHHcCC-
Confidence 344555566677665 689999999988766654422 33 5688888888778788899999
Q ss_pred CCCEEEEecCC-CCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHH--hCCeEEcccccccc
Q 010125 216 VKNFRAIKTTK-SSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQ--FGIWVHVDAAYAGS 292 (517)
Q Consensus 216 ~~~v~~vp~d~-~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~--~gi~lhvDaA~g~~ 292 (517)
+++.||++. ++++.+|++++++.+... .+.+|+++.++|+||.+-+.+++.++++. +++|+++|++|+.+
T Consensus 124 --~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f 196 (364)
T PRK04781 124 --PLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEF 196 (364)
T ss_pred --EEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhh
Confidence 999999853 234578999987654321 12367778899999999999888888875 48999999999765
Q ss_pred cccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC
Q 010125 293 ACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR 371 (517)
Q Consensus 293 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 371 (517)
.. .+..........+ =.+.-++.|.++ .....|+++.. ++.. +.+...... ++
T Consensus 197 ~~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~~-~~l~-~~l~~~~~~----------------~~------ 250 (364)
T PRK04781 197 SD-VPSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIAN-AELI-AVLRRCQAP----------------YP------ 250 (364)
T ss_pred cC-CcchHHHHhhCCC-EEEEecChhhcccccceeeeeeCC-HHHH-HHHHhccCC----------------CC------
Confidence 42 1111111111111 155677999997 56888998763 3332 233211100 00
Q ss_pred CCchHHHHHHHHh--c-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccc
Q 010125 372 FRSLKLWFVIRNY--G-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLS 448 (517)
Q Consensus 372 ~~al~~~~~l~~~--g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 448 (517)
...+...++...+ + .+.+.+.+++..+.++++.+.|++++++..+.++..+.+.+++. .
T Consensus 251 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~-~----------------- 312 (364)
T PRK04781 251 VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFD-D----------------- 312 (364)
T ss_pred CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcC-C-----------------
Confidence 0122223333333 2 23455666777788899999999887875344556666555553 2
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 449 EEEQINEFNRELLESINASGKAYMTHAVLG-GIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 449 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
..++.+.+.++|+.+..+..+. ...++|++++ +.++.++++++|+++.
T Consensus 313 --------~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 313 --------AEAAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQ 361 (364)
T ss_pred --------HHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 2456677778887765554332 2468999985 4678999999887753
No 216
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.76 E-value=2.1e-16 Score=159.62 Aligned_cols=273 Identities=14% Similarity=0.058 Sum_probs=175.5
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCC
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
.++++++++++|.+++ ..++|+|+++++.. +..+.. ++ .|++.+++|.++...++..|+
T Consensus 50 ~~lr~~la~~~~~~~~-------~i~~t~G~~~~i~~-~~~~l~-----------~g-~vl~~~p~y~~~~~~~~~~g~- 108 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA-------SVLPVNGAQEAIYL-LPRLLA-----------PG-RVLVLAPTYSEYARAWRAAGH- 108 (330)
T ss_pred HHHHHHHHHHhCCChh-------hEEECCCHHHHHHH-HHHHhC-----------CC-eEEEeCCCcHHHHHHHHHcCC-
Confidence 3455667777787654 67888888877654 322221 34 466778899999999999999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhCCeEEcccccccc
Q 010125 216 VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 216 ~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~gi~lhvDaA~g~~ 292 (517)
+++.+| |++.|++++++ + .+|+++.++|++|.+-+ +++|+++|++||+++++|.+|..+
T Consensus 109 --~~~~~~---------d~~~l~~~~~~-~------~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~ 170 (330)
T TIGR01140 109 --EVVELP---------DLDRLPAALEE-L------DVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDF 170 (330)
T ss_pred --EEEEeC---------CHHHHHhhccc-C------CEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccccc
Confidence 888876 67888888732 2 26778889999999977 777888899999999999999766
Q ss_pred cccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC
Q 010125 293 ACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR 371 (517)
Q Consensus 293 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 371 (517)
... .......+ ....+.++.+++|+++.| ..+|+++.++. .. +.+... . . .++
T Consensus 171 ~~~-~~~~~~~~-~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~-~~l~~~---~-~------------~~~------ 224 (330)
T TIGR01140 171 TPD-ASLAPQAA-RFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LL-ARLREA---L-G------------PWT------ 224 (330)
T ss_pred CCc-cchhhHhc-cCCCEEEEEecchhhcCchhhhhheeCCHH-HH-HHHHhc---C-C------------CCC------
Confidence 432 11111111 113457788999999844 67899887543 22 222211 0 0 001
Q ss_pred CCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchH
Q 010125 372 FRSLKLWFVIRNYGVAN-LRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEE 450 (517)
Q Consensus 372 ~~al~~~~~l~~~g~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 450 (517)
...+...++.+.+.... .+...++...+.+++.+.|++.+.+++. ++...++.+.+. .
T Consensus 225 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~-~------------------- 283 (330)
T TIGR01140 225 VNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTP-D------------------- 283 (330)
T ss_pred chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcC-C-------------------
Confidence 12233444444443333 3566778888999999999998666654 333333333322 1
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 451 EQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 451 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
..++.++|.++|++..++..+. +..++|++++. ..++ ++++.+|
T Consensus 284 ------~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~~---~~~~-~~~~~~l 329 (330)
T TIGR01140 284 ------AAALHEALARRGILIRDFDNFPGLDPRYLRFALPT---DEEN-DRLEEAL 329 (330)
T ss_pred ------HHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEecC---HHHH-HHHHHhh
Confidence 2467777888887666555543 34699999853 3345 7777665
No 217
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.75 E-value=3.8e-16 Score=160.17 Aligned_cols=237 Identities=16% Similarity=0.186 Sum_probs=163.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|....+| +.++++.|.+ .+++++||++|+..++.+... +++.|+++.+.|.+..
T Consensus 49 ~~p~~~~le----~~lA~l~g~~---------~v~~~~gg~~Ai~~~l~all~-----------~GD~Vl~~~p~y~~~~ 104 (382)
T TIGR02080 49 GNPTRDLLQ----QALAELEGGA---------GAVVTNTGMSAIHLVTTALLG-----------PDDLLVAPHDCYGGTY 104 (382)
T ss_pred CCchHHHHH----HHHHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 445555555 4566776632 578999999998777665422 5667888888987655
Q ss_pred HHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEc
Q 010125 207 KAA-QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 207 kaa-~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhv 285 (517)
... .+.+.+.-++..++ ..|+++++++++++++ +|+++.++|++|.+-|+++|+++|+++|++++|
T Consensus 105 ~~~~~~~~~~~~~v~~~d-------~~d~~~l~~ai~~~tk------lV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv 171 (382)
T TIGR02080 105 RLLNALAKKGCFRVLFVD-------QGDEQALRAALAQKPK------LVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV 171 (382)
T ss_pred HHHHHHHhhcCeEEEEEC-------CCCHHHHHHhcCcCce------EEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 433 23333111454443 2378999999876543 788899999999999999999999999999999
Q ss_pred ccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccccCCC
Q 010125 286 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKD 363 (517)
Q Consensus 286 DaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 363 (517)
|++|+.+....+ .. .++|.++.++|||++++.+ .|++.++++....+ +.....++
T Consensus 172 D~a~~~~~~~~p-l~------~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~-l~~~~~~~--------------- 228 (382)
T TIGR02080 172 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEE-LAWWANNL--------------- 228 (382)
T ss_pred ECCCcccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHH-HHHHHHcc---------------
Confidence 999976543221 11 1689999999999987655 77777766654322 21111111
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CeeEEEE
Q 010125 364 WQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----------------HFAVVCF 426 (517)
Q Consensus 364 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----------------~~~~v~f 426 (517)
+....++..|..++ |.+.+..+++++.+++..+.+.|++.|.++-+.-| ..++++|
T Consensus 229 -----g~~~sp~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~ 301 (382)
T TIGR02080 229 -----GVTGGAFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSF 301 (382)
T ss_pred -----CCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEE
Confidence 11235566777765 56788888999999999999999999988644221 1457888
Q ss_pred EecC
Q 010125 427 RVSP 430 (517)
Q Consensus 427 ~~~~ 430 (517)
.+..
T Consensus 302 ~~~~ 305 (382)
T TIGR02080 302 ELKG 305 (382)
T ss_pred EecC
Confidence 8853
No 218
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.75 E-value=7.2e-16 Score=159.14 Aligned_cols=235 Identities=11% Similarity=0.131 Sum_probs=165.9
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCc---
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTH--- 202 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H--- 202 (517)
..+|...++|+. ++++.|.+ ..+++++|+.|+..++.+... +++.|+++...|
T Consensus 67 ~~~p~~~~le~~----lA~l~g~~---------~al~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~~~~t 122 (403)
T PRK07810 67 YGNPTVSMFEER----LRLIEGAE---------ACFATASGMSAVFTALGALLG-----------AGDRLVAARSLFGSC 122 (403)
T ss_pred CCCchHHHHHHH----HHHHhCCC---------cEEEECChHHHHHHHHHHHhC-----------CCCEEEEccCCcchH
Confidence 355666666655 56666754 468899999998877655422 556788887665
Q ss_pred -hHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC
Q 010125 203 -CALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 281 (517)
Q Consensus 203 -~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi 281 (517)
..+.+.++..|+ +++.++. .|+++++++|+++++ +|+++.+++++|.+-|+++|+++|+++|+
T Consensus 123 ~~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~ai~~~tk------lV~~esp~Nptg~v~dl~~I~~la~~~g~ 186 (403)
T PRK07810 123 FVVCNEILPRWGV---ETVFVDG-------EDLSQWEEALSVPTQ------AVFFETPSNPMQSLVDIAAVSELAHAAGA 186 (403)
T ss_pred HHHHHHHHHHcCc---EEEEECC-------CCHHHHHHhcCcCce------EEEEECCCCCCCeecCHHHHHHHHHHcCC
Confidence 233456677788 8888864 289999999987654 78899999999999999999999999999
Q ss_pred eEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 282 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
+++||++|+.+....+ .. .++|.++.++||+++++-. .|+++.++. .+...+. .++..
T Consensus 187 ~vivD~a~a~~~~~~~-~~------~gaDivv~S~tK~l~g~g~~~gG~v~~~~~-~~~~~l~---~~~~~--------- 246 (403)
T PRK07810 187 KVVLDNVFATPLLQRG-LP------LGADVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQ---KLMRH--------- 246 (403)
T ss_pred EEEEECCCCccccCCh-hh------cCCcEEEccCCceecCCcCceeEEEEeChH-HHHHHHH---HHHHH---------
Confidence 9999999976654322 11 1689999999999976432 566666543 2221111 11110
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C-----C-----------Cee
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF-P-----C-----------HFA 422 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~-~-----~-----------~~~ 422 (517)
.+........|..++ |.+.+..++++..+++.++.+.|++.|.++-+. | | ..+
T Consensus 247 --------~g~~~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~ 316 (403)
T PRK07810 247 --------TGPALSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGT 316 (403)
T ss_pred --------hCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence 112235566676665 567889999999999999999999999875443 2 2 245
Q ss_pred EEEEEecC
Q 010125 423 VVCFRVSP 430 (517)
Q Consensus 423 ~v~f~~~~ 430 (517)
+++|.+..
T Consensus 317 ~~s~~l~~ 324 (403)
T PRK07810 317 VVTFELDA 324 (403)
T ss_pred EEEEEEcC
Confidence 78888854
No 219
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=6.2e-16 Score=160.45 Aligned_cols=241 Identities=15% Similarity=0.169 Sum_probs=151.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|...++|+ .++++.|.+ ..+++++|++|+..++.+... +++.|+++...|....
T Consensus 56 ~~pt~~~Le~----~lA~l~g~~---------~~l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~ 111 (425)
T PRK06084 56 MNPTNDVLEQ----RVAALEGGV---------GALAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTY 111 (425)
T ss_pred CCchHHHHHH----HHHHHhCCC---------ceeEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHH
Confidence 3455555655 466666643 457889999888877766533 4456777777766444
Q ss_pred HHHH-H---cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KAAQ-I---VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 kaa~-~---~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
..+. . .|+ .+..++. .|+++|+++|+++++ +|+++.++|++|.+-|+++|+++|++||++
T Consensus 112 ~~~~~~l~~~gi---~v~~~d~-------~d~e~le~ai~~~tk------lV~lesp~NPtG~v~dl~~I~~la~~~~i~ 175 (425)
T PRK06084 112 NLLAHTLPRIGI---ETRFAAH-------DDIAALEALIDERTK------AVFCESIGNPAGNIIDIQALADAAHRHGVP 175 (425)
T ss_pred HHHHHhccccee---EEEEECC-------CCHHHHHHHhccCCc------EEEEeCCCCCCCeecCHHHHHHHHHHcCCE
Confidence 4332 2 355 5555542 489999999976543 788889999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc-ceEEEEeCch-hHHhh------h-cCCccccCCccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD-CCCLWVKDPR-ALVSS------L-STNPEYLKNKAT 353 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~~~~~-~~~~~------~-~~~~~yl~~~~~ 353 (517)
++||++|+.+....+ .. .++|.++.++|||++.+-. .|.+++.+.. ..... + ...+.|..-...
T Consensus 176 vVvD~a~a~~~~~~p-~~------~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (425)
T PRK06084 176 LIVDNTVATPVLCRP-FE------HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYT 248 (425)
T ss_pred EEEECCCcccccCCh-hh------cCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhh
Confidence 999999986654321 11 1699999999999986532 3434443221 10000 1 111122110000
Q ss_pred cccccccC-----CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 354 ESMQVVDY-----KDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 354 ~~~~~~~~-----~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
...+.... .......+.+......|..++ |.+.+..++++..+++..+.+.|+++|.++-+
T Consensus 249 ~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lr--gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V 314 (425)
T PRK06084 249 EAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQ--GLETLALRMERHTENALKVARYLQQHPQVAWV 314 (425)
T ss_pred hhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 00000000 000111233345566676665 67888999999999999999999999987543
No 220
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.75 E-value=1.5e-16 Score=162.68 Aligned_cols=232 Identities=18% Similarity=0.221 Sum_probs=160.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH--
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA-- 204 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s-- 204 (517)
..|...++|+ .++++.|.+. .++++||++|+..++ .... +++.|++++..|.+
T Consensus 50 ~~pt~~~le~----~la~l~g~~~---------~~~~~sG~~ai~~~~-~ll~-----------~Gd~Vl~~~~~y~~t~ 104 (366)
T PRK08247 50 GNPTRGVLEQ----AIADLEGGDQ---------GFACSSGMAAIQLVM-SLFR-----------SGDELIVSSDLYGGTY 104 (366)
T ss_pred CCchHHHHHH----HHHHHhCCCc---------EEEEcCHHHHHHHHH-HHhC-----------CCCEEEEecCCcCcHH
Confidence 3455555654 5777777753 488888888776543 2211 44567777777765
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 205 --LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 205 --~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
+...+...|+ +++.++. .|+++|+++++++++ +|+++.+++++|.+.++++|+++|++||++
T Consensus 105 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~~i~~~tk------lv~le~P~NP~~~~~dl~~I~~la~~~g~~ 168 (366)
T PRK08247 105 RLFEEHWKKWNV---RFVYVNT-------ASLKAIEQAITPNTK------AIFIETPTNPLMQETDIAAIAKIAKKHGLL 168 (366)
T ss_pred HHHHHHhhccCc---eEEEECC-------CCHHHHHHhcccCce------EEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 3345566788 8888864 388999999876543 788899999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
+++|.+|+......+ .. .++|.++.+++|+++.+.+ .|++..+++.... .+.....+.
T Consensus 169 lIvD~t~~~~~~~~p-~~------~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~-~~~~~~~~~------------ 228 (366)
T PRK08247 169 LIVDNTFYTPVLQRP-LE------EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCE-RLAYYQNAA------------ 228 (366)
T ss_pred EEEECCCccccccCc-hh------cCCcEEEeecceeccCCCceeeeEEecChHHHHH-HHHHHHHhc------------
Confidence 999999976544322 11 2689999999999986543 5666655443322 211000000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCeeEEEEEec
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF-PCHFAVVCFRVS 429 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~-~~~~~~v~f~~~ 429 (517)
+........|.+++ +.+.+..++++..++++.+.+.|++.|++..+. ++..++++|.+.
T Consensus 229 --------g~~~s~~~a~l~~~--~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 229 --------GAVLSPFDSWLLIR--GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred --------CCCCChHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 11123345566665 445677888899999999999999999987544 447889999874
No 221
>PRK03321 putative aminotransferase; Provisional
Probab=99.75 E-value=3.9e-16 Score=159.17 Aligned_cols=305 Identities=11% Similarity=0.037 Sum_probs=189.5
Q ss_pred HHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhccc
Q 010125 109 FLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 188 (517)
Q Consensus 109 ~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~ 188 (517)
.+.+.+...+.. ...|. .++..++++.+ ++++|.+++ ..++++|+++++..++.+...
T Consensus 39 ~~~~a~~~~~~~-~~~y~-~~g~~~lr~~i----a~~~~~~~~-------~I~~~~G~~~~l~~~~~~~~~--------- 96 (352)
T PRK03321 39 SVRAAIARAAAG-VNRYP-DMGAVELRAAL----AEHLGVPPE-------HVAVGCGSVALCQQLVQATAG--------- 96 (352)
T ss_pred HHHHHHHHHHHh-cCcCC-CCcHHHHHHHH----HHHhCcCHH-------HEEECCCHHHHHHHHHHHhcC---------
Confidence 444444444321 22332 34555555554 455566554 678888887766554433211
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC
Q 010125 189 NISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP 268 (517)
Q Consensus 189 ~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp 268 (517)
+++.|++..+++.....+++..|+ +++.+|.++ ++.+|++++++++++.+ .+|+++.+++++|.+-|
T Consensus 97 --~gd~Vli~~p~y~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~ 163 (352)
T PRK03321 97 --PGDEVIFAWRSFEAYPILVQVAGA---TPVQVPLTP--DHTHDLDAMAAAITDRT------RLIFVCNPNNPTGTVVT 163 (352)
T ss_pred --CCCEEEeCCCCHHHHHHHHHHcCC---EEEEccCCC--CCCCCHHHHHHhhccCC------CEEEEeCCCCCcCCCcC
Confidence 556788887887777778889999 999999874 36899999999886543 36777889999999999
Q ss_pred hhHHHHHHHH--hCCeEEcccccccccccCccccccccCCC-CCC-eeeeccccccCC-CCcceEEEEeCchhHHhhhcC
Q 010125 269 LKPLCDVAKQ--FGIWVHVDAAYAGSACICPEFRHFIDGVE-GAD-SFSLNAHKWFFA-TLDCCCLWVKDPRALVSSLST 343 (517)
Q Consensus 269 l~eI~~i~~~--~gi~lhvDaA~g~~~~~~~~~~~~~~g~~-~aD-si~~~~hK~l~~-p~~~g~l~~~~~~~~~~~~~~ 343 (517)
.++|.++|++ +|+++++|++|+.+.... .....+..+. .-+ .++.++.|.++. ...+|+++.. +.. .+.+..
T Consensus 164 ~~~l~~l~~~~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~-~~~~~~ 240 (352)
T PRK03321 164 PAELARFLDAVPADVLVVLDEAYVEYVRDD-DVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEV-IAALRK 240 (352)
T ss_pred HHHHHHHHHhCCCCeEEEEechHHHhccCc-CCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHH-HHHHHH
Confidence 9999999997 599999999997655321 1111111111 123 344579999974 4567888764 332 223221
Q ss_pred CccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 010125 344 NPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFA 422 (517)
Q Consensus 344 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~ 422 (517)
. + . ......+...+++..+ ..+.+.+.+++..+..+++.+.|++. ++.+. ++..+
T Consensus 241 ~--~--~------------------~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~ 296 (352)
T PRK03321 241 V--A--V------------------PFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVP-PSQAN 296 (352)
T ss_pred h--c--C------------------CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCC
Confidence 1 0 0 0011233333333333 23445566666667777888888876 66643 44545
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWT 502 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~ 502 (517)
.+.+++... ..++.+.|.+.|+.. .+ + +..++|++++ +.++.+++++
T Consensus 297 ~i~i~l~~~-------------------------~~~~~~~l~~~gI~v-~~--~-~~~~iRi~~~----~~~~~~~~~~ 343 (352)
T PRK03321 297 FVWLPLGER-------------------------TADFAAAAAEAGVVV-RP--F-AGEGVRVTIG----APEENDAFLR 343 (352)
T ss_pred EEEEeCCCC-------------------------HHHHHHHHHHCCEEE-Ec--c-CCCcEEEeeC----CHHHHHHHHH
Confidence 555544211 245667777788654 33 2 3346999984 6679999999
Q ss_pred HHHHHH
Q 010125 503 VVQQHL 508 (517)
Q Consensus 503 ~l~~~~ 508 (517)
+|+++.
T Consensus 344 al~~~~ 349 (352)
T PRK03321 344 AARAWR 349 (352)
T ss_pred HHHHHh
Confidence 998764
No 222
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.75 E-value=6.9e-16 Score=160.54 Aligned_cols=356 Identities=12% Similarity=0.027 Sum_probs=210.2
Q ss_pred CHHHHHHHHHHhhcCCCCCCCCCccceeC--CCCCChHHHHHHHHHhcccc-----cccccccChhhHHHHHHHHHHHHH
Q 010125 72 SMETILQDVQQHIVPGITHWQSPNYFAYF--PSSGSIAGFLGEMLSSGFNI-----VGFNWISSPAATELENIVMDWLGQ 144 (517)
Q Consensus 72 ~~~~il~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~l~~~~n~-----~~~~~~~sp~~~~lE~~v~~~l~~ 144 (517)
.++++.+.+.+.-.. |..+..+.+- ..+..++..+.+.+...++. ....|...++..++.+.+++|+.+
T Consensus 16 ~~~~~~~~~~~~~~~----~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~ 91 (409)
T PRK07590 16 LFPEIARRVNAFREA----NPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQ 91 (409)
T ss_pred hHHHHHHHHHHHhhh----cCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHH
Confidence 456666666654322 2233333322 22222344455555554432 335676777889999999999988
Q ss_pred HcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCC------
Q 010125 145 MLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKN------ 218 (517)
Q Consensus 145 l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~------ 218 (517)
..|++-. ...+++|+|+++++.. +....+ +++.|++.++++..+..+++..|. .
T Consensus 92 ~~g~~~~-----~~~I~it~Ga~~al~~-l~~~~~-----------~gd~V~v~~P~Y~~~~~~~~~~g~---~~~~~~~ 151 (409)
T PRK07590 92 ARGCDIS-----ADEIFISDGAKCDTGN-ILDIFG-----------PDNTIAVTDPVYPVYVDTNVMAGR---TGEANED 151 (409)
T ss_pred hcCCcCC-----hhhEEECCCHHHHHHH-HHHhcC-----------CCCEEEEeCCCCcchHHHHHHcCC---ccccccc
Confidence 7766432 1378999998888654 322211 566788899999999999999998 5
Q ss_pred -----EEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhCCeEEcccccc
Q 010125 219 -----FRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYA 290 (517)
Q Consensus 219 -----v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~gi~lhvDaA~g 290 (517)
++.+|++.++++..|.+. . .+.+|+++.++||||.+-+ +++|+++|++||+|+++|.+|+
T Consensus 152 ~~~~~~~~v~~~~~~~~~~d~~~------~------~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~ 219 (409)
T PRK07590 152 GRYSGIVYLPCTAENNFVPELPE------E------KVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYE 219 (409)
T ss_pred ccccceeEeecccccCCcccCcc------c------CceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccch
Confidence 889998754445444321 1 2346777799999999854 6778888999999999999997
Q ss_pred cccccCccccccccCCCCC---CeeeeccccccC-CCCcceEEEEeCchhHHhhhcCC------ccccCCcccccccccc
Q 010125 291 GSACICPEFRHFIDGVEGA---DSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTN------PEYLKNKATESMQVVD 360 (517)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~a---Dsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~------~~yl~~~~~~~~~~~~ 360 (517)
.+......... +..+... -.+..++.|.++ ....+|+++..+. .. ..+... ..+.....
T Consensus 220 ~~~~~~~~~~~-~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~~-li-~~~~~~~~~~~~~~~~~~~~-------- 288 (409)
T PRK07590 220 AFISDPSLPHS-IYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPKE-LK-GKTSDGEGVSLNSLWNRRQS-------- 288 (409)
T ss_pred hhccCCCCCcc-hhhCCCcccceEEEecCccccCCcCceeEEEEcCHH-Hh-hhccccchhhhHHHHHHHHh--------
Confidence 65432111111 1112221 234567999996 6688898887432 22 111000 00000000
Q ss_pred CCCccccCCCCCCchHHHHHHHHh---cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhh
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNY---GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDK 437 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~---g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~ 437 (517)
... .....+...++...+ +.+.++++.++..+.++++.+.|++. ++++..+...+.+.+++.+. .
T Consensus 289 ---~~~---~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~-~---- 356 (409)
T PRK07590 289 ---TKF---NGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDG-M---- 356 (409)
T ss_pred ---hcc---cCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCC-C----
Confidence 000 001223333333333 34456667777788888999999887 67765333344555555431 0
Q ss_pred hhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 438 LKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
...++.+.+. +.|++..++..+. +..++|+++. .+++++++.++.|.++
T Consensus 357 ------------------~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 357 ------------------SSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF---GSRENVLEAMERIKKA 408 (409)
T ss_pred ------------------CHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc---CCHHHHHHHHHHHHhh
Confidence 0234555555 4566555544332 3469999963 3577899998888654
No 223
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.75 E-value=5.9e-16 Score=160.01 Aligned_cols=221 Identities=18% Similarity=0.188 Sum_probs=153.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH--
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA-- 204 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s-- 204 (517)
..|....+| +.++++.|.+ ..+++++|+.|+..++.+... +++.|+++...|..
T Consensus 63 ~~p~~~~le----~~lA~l~g~~---------~~i~~~sG~~Al~~~l~~ll~-----------~Gd~Viv~~~~y~~t~ 118 (403)
T PRK07503 63 SNPTLALLE----QRMASLEGGE---------AAVALASGMGAITATLWTLLR-----------PGDEVIVDQTLYGCTF 118 (403)
T ss_pred CCchHHHHH----HHHHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEccCccchHH
Confidence 445566666 4577777765 347788889887766654321 55668888777744
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 205 --LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 205 --~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
....+...|+ +++.++.+ |+++|+++++++++ +|++..+++++|.+.|+++|+++|++||++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~tk------lV~le~p~NPtG~~~di~~I~~la~~~gi~ 182 (403)
T PRK07503 119 AFLHHGLGEFGV---TVRHVDLT-------DPAALKAAISDKTR------MVYFETPANPNMRLVDIAAVAEIAHGAGAK 182 (403)
T ss_pred HHHHHHHhhCCE---EEEEeCCC-------CHHHHHHhcCccCc------EEEEeCCCCCCCeeeCHHHHHHHHHHcCCE
Confidence 3345566788 88888653 78999999876543 788889999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
+++|++|+.+....+ . + .++|.++.+++|+++.+.+ +|+++ .+++...+ +... ....
T Consensus 183 lIvD~a~a~~~~~~~-l-----~-~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~-l~~~--~~~~---------- 241 (403)
T PRK07503 183 VVVDNTYCTPYLQRP-L-----E-LGADLVVHSATKYLGGHGDITAGLVV-GGKALADR-IRLE--GLKD---------- 241 (403)
T ss_pred EEEECCCcccccCCc-h-----h-hCCCEEEccccccccCCCceeEEEEE-cCHHHHHH-HHhh--hHHh----------
Confidence 999999976543211 1 1 2789999999999987643 66665 55543322 2100 0000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
..+-+...+..|..++ |.+.+..++++..+++..+.+.|++.|.++.+
T Consensus 242 ------~~g~~~s~~~a~l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V 289 (403)
T PRK07503 242 ------MTGAVMSPFDAFLLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELV 289 (403)
T ss_pred ------CcCCCCCHHHHHHHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0122334556666665 55778889999999999999999999887644
No 224
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.75 E-value=5.7e-16 Score=159.15 Aligned_cols=217 Identities=14% Similarity=0.225 Sum_probs=151.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH---
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA--- 204 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s--- 204 (517)
.|...++| +.+++++|.+ ..+++++|++|+..++.+... +++.|+++...|.+
T Consensus 53 ~p~~~~le----~~la~l~g~~---------~~~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~~~t~~ 108 (380)
T TIGR01325 53 NPTVAAFE----ERIAALEGAE---------RAVATATGMSAIQAALMTLLQ-----------AGDHVVASRSLFGSTVG 108 (380)
T ss_pred CchHHHHH----HHHHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCcchHHH
Confidence 45555555 4566777764 358899999999888765432 44557777777744
Q ss_pred -HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 205 -LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 205 -~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
+.+.+...|+ +++.++.+ |++++++++++++ .+|+++.+++++|.+.|+++|+++|+++|+++
T Consensus 109 ~~~~~~~~~g~---~v~~v~~~-------d~~~l~~~i~~~t------klV~le~p~np~g~~~dl~~I~~la~~~gi~l 172 (380)
T TIGR01325 109 FISEILPRFGI---EVSFVDPT-------DLNAWEAAVKPNT------KLVFVETPSNPLGELVDIAALAELAHAIGALL 172 (380)
T ss_pred HHHHHHHHhCC---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcCCEE
Confidence 3345677788 88888753 6888988886543 38888999999999999999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cc-eEEEEeCchhHHhhhcCCccccCCccccccccccC
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DC-CCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDY 361 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~-g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 361 (517)
+||++|+.+....+ .. .++|.++.++||+++.+. .. |+++.+ +.... .+. .+..
T Consensus 173 ivD~a~~~~~~~~p-l~------~g~Divv~S~sK~l~g~g~~~gG~vv~~-~~~~~-~l~---~~~~------------ 228 (380)
T TIGR01325 173 VVDNVFATPVLQQP-LK------LGADVVVYSATKHIDGQGRVMGGVIAGS-EELMA-EVA---VYLR------------ 228 (380)
T ss_pred EEECCCcccccCCc-hh------hCCCEEEeeccceecCCCCeEEEEEEeC-HHHHH-HHH---HHHH------------
Confidence 99999976543221 11 168999999999998763 23 555443 33322 111 1110
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010125 362 KDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEI 415 (517)
Q Consensus 362 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l 415 (517)
..+....+...|.+++ |.+.+..++++..+++.++.+.|+++|+++-
T Consensus 229 -----~~g~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~ 275 (380)
T TIGR01325 229 -----HTGPAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQA 275 (380)
T ss_pred -----hhCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence 0111223445566665 5677788999999999999999999988754
No 225
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.75 E-value=2.1e-15 Score=156.44 Aligned_cols=294 Identities=16% Similarity=0.127 Sum_probs=181.2
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCC
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
.++.+++++++|.+.. ...++++||++|+..|+..++.. | .+.+|.+....|.+...+....|..
T Consensus 88 ~~la~~l~~~~~~~~~------~~v~~~~sgsea~~~al~~~~~~-----g----~~~ii~~~~~yhg~~~~~~~~~~~~ 152 (398)
T PRK03244 88 IALAERLVELLGAPEG------GRVFFCNSGAEANEAAFKLARLT-----G----RTKIVAAEGGFHGRTMGALALTGQP 152 (398)
T ss_pred HHHHHHHHHhCCCCCC------CEEEEeCchHHHHHHHHHHHHHH-----C----CCeEEEECCCcCCccHHHHhccCCc
Confidence 4677888888875421 26899999999999999988763 1 2344555444555544444444421
Q ss_pred C---------CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhCCe
Q 010125 216 V---------KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIW 282 (517)
Q Consensus 216 ~---------~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~gi~ 282 (517)
. .++..+|. .|+++|++++.+. +.+|++....+++|.+-| +++|.++|++||++
T Consensus 153 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~------~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 219 (398)
T PRK03244 153 AKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDD------TAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGAL 219 (398)
T ss_pred ccccCCCCCCCCceEeCC-------CCHHHHHHhhcCC------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0 02333332 3789999888532 346777777899999877 89999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCC
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYK 362 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 362 (517)
+++|++|.++......+.....++ ..|.+++ .|+++.++..|+++.+++ +.+.+... ..
T Consensus 220 lI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~~~~~~--~~~~~~~~---~~------------- 278 (398)
T PRK03244 220 LVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGACLAFGP--AADLLTPG---LH------------- 278 (398)
T ss_pred EEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEEEEcHH--HHhhccCC---CC-------------
Confidence 999999976432211111011222 4676655 699987788999988654 22333210 00
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEecCCCcchhhhhh
Q 010125 363 DWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF--PCHFAVVCFRVSPSPVLMDKLKT 440 (517)
Q Consensus 363 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~~~ 440 (517)
..++ .+..........+++.+..+ +..++..++.++|.+.|+++ ++.++. .....++.+.+...
T Consensus 279 ~~t~-~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~~--------- 344 (398)
T PRK03244 279 GSTF-GGNPVACAAALAVLDTIASE---GLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTAP--------- 344 (398)
T ss_pred cCCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEecc---------
Confidence 0011 11111223334444434333 45567777889999999875 222221 12334555555321
Q ss_pred hhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 441 KYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
...++.+++.++|.+. .+. +..++|+++ +...+++||++++++|+++.+++.
T Consensus 345 ---------------~~~~~~~~l~~~Gv~~-~~~---~~~~iR~~p-~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 345 ---------------VAKAVEAAAREAGFLV-NAV---APDVIRLAP-PLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred ---------------HHHHHHHHHHHCCeEE-eec---CCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHhcc
Confidence 2356778888888654 331 346899998 445678899999999999887654
No 226
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.74 E-value=2.3e-15 Score=156.27 Aligned_cols=297 Identities=13% Similarity=0.086 Sum_probs=175.4
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCC-
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGI- 214 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~- 214 (517)
.++.+.++++.|.+ ..+++++||+||..|+.++|.......|.......+|.++...|-+..-+..+.+-
T Consensus 86 ~~l~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~ 156 (401)
T PRK00854 86 APLYEELAALTGSH---------KVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDP 156 (401)
T ss_pred HHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCc
Confidence 34445566666643 47999999999999999998642211111101234555665567654433322110
Q ss_pred --------CCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhCCe
Q 010125 215 --------DVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIW 282 (517)
Q Consensus 215 --------g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~gi~ 282 (517)
...+++.+|. .|+++|+++|.+.+ .+|++..+.+++|.+-| +++|.++|++||++
T Consensus 157 ~~~~~~~~~~~~~~~~~~-------~d~~~le~~i~~~~------~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~ 223 (401)
T PRK00854 157 DARGGFGPFTPGFRVVPF-------GDAEALEAAITPNT------VAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVT 223 (401)
T ss_pred cccccCCCCCCCeEEeCC-------CCHHHHHHHhCCCe------EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0012334432 48899999986543 38889999999999876 99999999999999
Q ss_pred EEcccccccccccCcc-ccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPE-FRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~-~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
+++|++|.+... ... +.....++ ..|.++++ |++...+ ..|+++.+++ .. +.+.. ....
T Consensus 224 lI~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~-~~l~~----~~~~--------- 284 (401)
T PRK00854 224 LILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNSE-VL-GVLKP----GQHG--------- 284 (401)
T ss_pred EEEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcHH-HH-hcccC----CCCC---------
Confidence 999999975422 111 11111222 46777764 9997653 5777776543 22 22211 0000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEecCCCcchhhh
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF--PCHFAVVCFRVSPSPVLMDKL 438 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~~~~ 438 (517)
.++ ++ ..+..++++..+..-.-.++.++..++++++.+.|+++. +..+. .+...++.|.+.+..
T Consensus 285 ---~t~-~~---~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~~~------ 350 (401)
T PRK00854 285 ---STF-GG---NPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEPEA------ 350 (401)
T ss_pred ---CCC-Cc---CHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEecCc------
Confidence 011 11 223333333333110012356778888999999998763 22221 233455555554321
Q ss_pred hhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 439 KTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
....++.+.|.++|+.. .+ .+..++|+++ +...+++||++++++|+++.
T Consensus 351 ----------------~~~~~~~~~L~~~GV~v-~~---~~~~~lR~~p-~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 351 ----------------GGARQYCEALKERGLLA-KD---THDHTIRLAP-PLVITREQVDWALEQIAKVL 399 (401)
T ss_pred ----------------hhHHHHHHHHHHCCeEE-ec---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHh
Confidence 12356777777788654 22 2346899997 45678889999999998764
No 227
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.74 E-value=1e-15 Score=159.56 Aligned_cols=316 Identities=11% Similarity=0.044 Sum_probs=189.0
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
...++.++.+.+++++|.+.+ ..++++|||+|+..|+.++|... .++.+++.+...|.+...+..
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~-------~v~~~~sgsea~~~al~~~~~~~--------~~~~ii~~~~~yhg~~~~~~~ 141 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLD-------KVFFVNSGTEAVEAALKLARAYT--------GRKKIISFEGAYHGRTLGALS 141 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHc--------CCCeEEEECCCcCCccHHHHH
Confidence 466777888889998885433 68999999999999999887531 033445555556665555444
Q ss_pred HcCCC---------CCCEEEEecCCC----CCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHH
Q 010125 211 IVGID---------VKNFRAIKTTKS----SSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLC 273 (517)
Q Consensus 211 ~~G~g---------~~~v~~vp~d~~----~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~ 273 (517)
..+-. ..+++.+|.+.. .++..|+++|++.+++. +..+.+|+++...+++|.+.| +++|.
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~ 218 (413)
T cd00610 142 LTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKALR 218 (413)
T ss_pred hcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHHH
Confidence 43220 114677776521 12455899999998752 123457777777777898877 99999
Q ss_pred HHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 010125 274 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKAT 353 (517)
Q Consensus 274 ~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 353 (517)
++|++||+++++|++|+++............++ ..|.+++ .|+++.++.+|+++.+ ++. .+.+. ...+...
T Consensus 219 ~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~--sK~l~~g~~~g~~~~~-~~~-~~~~~-~~~~~~~--- 289 (413)
T cd00610 219 ELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTL--GKGLGGGLPLGAVLGR-EEI-MDAFP-AGPGLHG--- 289 (413)
T ss_pred HHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEE--cccccCccccEEEEEc-HHH-HHhhc-cCCCCCC---
Confidence 999999999999999986422111100001122 3566554 5999888889998774 332 22220 0000000
Q ss_pred cccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-eEEe--cCCCeeEEEEEecC
Q 010125 354 ESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKR-FEIV--FPCHFAVVCFRVSP 430 (517)
Q Consensus 354 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~-~~l~--~~~~~~~v~f~~~~ 430 (517)
.+. .+.......+.++++.+.. .++.++..++++++++.|+++.. ..++ ..+...++++.+..
T Consensus 290 ----------~t~-~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~ 355 (413)
T cd00610 290 ----------GTF-GGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVK 355 (413)
T ss_pred ----------CCC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEec
Confidence 000 1111222344455555533 34567777788888888876421 1111 12445667777653
Q ss_pred CCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 431 SPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
.... . .........+.+.|.++|+.+.+. . ..++|++++ ...+++||++++++|+++
T Consensus 356 ~~~~------------~---~~~~~~~~~~~~~l~~~gv~v~~~-~---~~~lR~~~~-~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 356 DRAT------------K---PPDKELAAKIIKAALERGLLLRPS-G---GNVIRLLPP-LIITEEEIDEGLDALDEA 412 (413)
T ss_pred CCCc------------C---CcchHHHHHHHHHHHHCCeEEeec-C---CCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 2100 0 000123456778888888654332 1 457999984 566788999999998765
No 228
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.74 E-value=2.8e-15 Score=164.78 Aligned_cols=364 Identities=14% Similarity=0.112 Sum_probs=222.5
Q ss_pred hhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHH-H------HHHhccccccccccc
Q 010125 55 PGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLG-E------MLSSGFNIVGFNWIS 127 (517)
Q Consensus 55 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~------~l~~~~n~~~~~~~~ 127 (517)
|..++..-+..||+ +.+..++++++.+....+.. ...|.|--.-+--.|+++. + |++++ .+.... .
T Consensus 31 P~~i~~~~~l~lp~-~~sE~e~~~~~~~la~~N~~---~~~fig~G~y~~~~p~~i~r~v~~~p~~~Tay-tPyQ~E--i 103 (939)
T TIGR00461 31 PPNILKRRPLQLEA-PSKEYEALAHLKKIASKNHK---FKSYIGMGYYGTILPPVIQRNLLENPGWYTAY-TPYQPE--I 103 (939)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccCCCCcCCCcCChHHHHHHHhCchhhhcC-CCCChh--h
Confidence 55565443456776 57899999999987665533 2234331111123444444 2 33332 232222 3
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
|.+.-+.--+...++++|.|++.. +..+..++|.+....+++.|.. + + ++..|++++..|+....
T Consensus 104 sQG~Le~l~e~Qt~i~eLtGm~~a-------NaSl~d~atA~aEa~~~a~~~~--~--~----~~~~vlv~~~~hP~~~~ 168 (939)
T TIGR00461 104 SQGRLEALLNFQTVVSDLTGLPVA-------NASLLDEGTAAAEAMALSFNVS--K--K----KANKFFVAKDLHPQTKS 168 (939)
T ss_pred hhHHHHHHHHHHHHHHHHHCCChh-------hhhccchhhHHHHHHHHHHHhh--c--C----CCCEEEECCCCCcchHH
Confidence 444444445566999999999975 5678888886654333333221 0 1 23569999999987553
Q ss_pred ----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 208 ----AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 208 ----aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
-+...|+ +++.++. ++|++.+ ++ +.|+++.+++ .|.+.++++|++++|++|.++
T Consensus 169 v~~t~a~~~g~---~v~~~~~----------~~l~~~~--~~------~~v~~q~Pn~-~G~ied~~~i~~~~h~~gal~ 226 (939)
T TIGR00461 169 VLHTRAKPFGI---EVIVVDC----------SDIKKAV--DV------FGCLLQYPAT-DGSILDYKQLIDALHSHKSLV 226 (939)
T ss_pred HHHHHHHhcCc---EEEEEcH----------HHHhhcC--CE------EEEEEECCCC-CeEEecHHHHHHHHHHcCCEE
Confidence 3457788 8887742 3455554 22 4677777764 799999999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccC-----CCCcceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-----ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-----~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
+|++-.-+..+..+ .... +||.+..+.++|+. .| ..|++.+++. +.+.+ |+-+.+...+..+.
T Consensus 227 ~~~ad~~al~ll~~-Pge~-----GaDi~vg~~q~fg~p~g~GGP-~aG~~a~~~~--l~r~l---PgrivG~s~D~~G~ 294 (939)
T TIGR00461 227 SVAADLMALTLLTP-PGHY-----GADIVLGSSQRFGVPMGYGGP-HAAFFAVKDE--YNRKM---PGRIVGVSKDALGN 294 (939)
T ss_pred EEEechHHhCCcCC-HHHc-----CCcEEeeCCCccCCCCCCCCC-ceeeeeecHh--hHhhC---CCCceeEEecCCCC
Confidence 99653322222221 1222 89999555555543 34 4888999865 22222 33332211111111
Q ss_pred ccCCCcccc----CCCCCCc----------hHHHHH--HHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 010125 359 VDYKDWQIT----LSRRFRS----------LKLWFV--IRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFA 422 (517)
Q Consensus 359 ~~~~~~~~~----~sr~~~a----------l~~~~~--l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~ 422 (517)
..+. ++++ --||-.+ +++.++ +..+|.+|++++-++...++.+|++.|++ .|++++.++.+.
T Consensus 295 ~~~~-l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~fF~ 372 (939)
T TIGR00461 295 TALR-LALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKTWFD 372 (939)
T ss_pred ccce-eecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCCccc
Confidence 1111 1111 1233221 122223 56679999999999999999999999998 599998887777
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWT 502 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~ 502 (517)
.+.+++.... ..++.+++.++|+. +.. .....+++|+. ..++++||+.+++
T Consensus 373 ~~~v~~~~~~------------------------~~~i~~~~~~~gi~-l~~---~~~~~i~~s~~-E~~t~~di~~l~~ 423 (939)
T TIGR00461 373 TLTVKVGNGI------------------------SSELLKAAEEFNIN-LRA---VDTTTVGIALD-ETTTKADVENLLK 423 (939)
T ss_pred eEEEEeCCCC------------------------HHHHHHHHHHCCCe-eee---cCCCEEEEEee-cCCCHHHHHHHHH
Confidence 8888773111 35677777788875 222 22247999985 5778889999999
Q ss_pred HHH
Q 010125 503 VVQ 505 (517)
Q Consensus 503 ~l~ 505 (517)
.+.
T Consensus 424 ~~~ 426 (939)
T TIGR00461 424 VFD 426 (939)
T ss_pred Hhc
Confidence 984
No 229
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.74 E-value=1.3e-15 Score=154.01 Aligned_cols=277 Identities=11% Similarity=0.038 Sum_probs=179.7
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
++++.+++.+|.++. .+++|+|+++++..++. +.. ++.+|+. ++++..+..+++..|+
T Consensus 44 ~lr~~ia~~~~~~~~-------~I~it~Gs~~~l~~~~~-~~~-----------~~~vv~~-~P~y~~y~~~~~~~G~-- 101 (332)
T PRK06425 44 DIEDQIKIYTQGLKI-------KVLIGPGLTHFIYRLLS-YIN-----------VGNIIIV-EPNFNEYKGYAFTHGI-- 101 (332)
T ss_pred HHHHHHHHHhCCCcc-------eEEECCCHHHHHHHHHH-HhC-----------CCcEEEe-CCChHHHHHHHHHcCC--
Confidence 344556777788765 68999999998876553 211 3445555 7999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhCCeEEccccccccc
Q 010125 217 KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSA 293 (517)
Q Consensus 217 ~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~gi~lhvDaA~g~~~ 293 (517)
+++.||++. ..+|.+.+++ . .+.+|+++.++||||.+-+ +++|+++|++||+|+++|.+|+.+.
T Consensus 102 -~v~~vp~~~---~~~~~~~l~~---~------~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~ 168 (332)
T PRK06425 102 -RISALPFNL---INNNPEILNN---Y------NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFV 168 (332)
T ss_pred -eEEEEeCCc---ccCcHHHHhh---c------CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccc
Confidence 999999874 3456655542 1 2336777899999999855 6777888899999999999997664
Q ss_pred ccCccccccccCCCC-CC-eeeeccccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCccccCC
Q 010125 294 CICPEFRHFIDGVEG-AD-SFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQITLS 369 (517)
Q Consensus 294 ~~~~~~~~~~~g~~~-aD-si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s 369 (517)
.. ........... -. .+.-++.|.++ ....+|+++..+ +.. +.+.. ...+ ..
T Consensus 169 ~~--~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~-~li-~~l~~~~~~~-----------------~~--- 224 (332)
T PRK06425 169 PN--RAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD-YNM-KISRKITEPW-----------------SV--- 224 (332)
T ss_pred cc--cchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH-HHH-HHHHHcCCCC-----------------cc---
Confidence 31 11111111111 12 45567999998 667789887743 222 22221 1111 11
Q ss_pred CCCCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccc
Q 010125 370 RRFRSLKLWFVIRNYGVAN-LRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLS 448 (517)
Q Consensus 370 r~~~al~~~~~l~~~g~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 448 (517)
.... ..++.....+. +++..+...+.++++.+.|++. ++++..++..+.+.+++. .
T Consensus 225 ---~~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~-~----------------- 281 (332)
T PRK06425 225 ---CDPA-IDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP-D----------------- 281 (332)
T ss_pred ---CHHH-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC-C-----------------
Confidence 1111 11222222222 3456777778889999999887 787765666677777653 2
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 449 EEEQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 449 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
..++.+.|.++|+.......+. +..++|+++. +.++.++++++|+++
T Consensus 282 --------~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~ 330 (332)
T PRK06425 282 --------AHDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNF 330 (332)
T ss_pred --------HHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHH
Confidence 2456677777887665554442 3469999985 466999999999865
No 230
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.74 E-value=1.9e-16 Score=161.17 Aligned_cols=234 Identities=14% Similarity=0.159 Sum_probs=161.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
..+|...++|+.+.++ .|.+ .+++++||++|+..++. +.. +++.|+++...|-..
T Consensus 51 ~~~p~~~~le~~lA~l----eg~~---------~~v~~~sG~aAi~~~l~-~l~-----------~GD~VI~~~~~yg~~ 105 (364)
T PRK07269 51 TKNPTRAKLEETLAAI----ESAD---------YALATSSGMSAIVLAFS-VFP-----------VGSKVVAVRDLYGGS 105 (364)
T ss_pred CCCccHHHHHHHHHHH----hCCC---------eEEEeCCHHHHHHHHHH-HhC-----------CCCEEEEecCCcCch
Confidence 3567777888765554 4432 57999999999887763 221 455677776655332
Q ss_pred HHHHHHc-CCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 206 QKAAQIV-GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 206 ~kaa~~~-G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
....... .-+ . +.+ .+.+|+++++++|+++++ +|+++.++|++|.+.|+++|+++|+++|++++
T Consensus 106 ~~~~~~~~~~~--~---~~~----~~~~d~~~l~~~i~~~Tk------lV~lesP~NPtg~~~di~~I~~la~~~gi~vv 170 (364)
T PRK07269 106 FRWFNQQEKEG--R---FHF----TYANTEEELIAAIEEDTD------IVYIETPTNPLMVEFDIEKVAKLAHAKGAKVI 170 (364)
T ss_pred HHHHHHHHhcC--c---EEE----EecCCHHHHHHhcCcCce------EEEEECCCCCCCeeeCHHHHHHHHHHcCCEEE
Confidence 2221111 110 1 111 134689999999986654 89999999999999999999999999999999
Q ss_pred cccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccccCC
Q 010125 285 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYK 362 (517)
Q Consensus 285 vDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 362 (517)
||++|+......+ .. .++|.++.|+||+++++-+ .|++++++++...+... ...
T Consensus 171 vD~t~~~~~~~~p-l~------~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~-----~~~------------ 226 (364)
T PRK07269 171 VDNTFYSPIYQRP-IE------LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY-----NLN------------ 226 (364)
T ss_pred EECCCcccccCCc-hh------hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH-----HHH------------
Confidence 9999876543222 11 2799999999999987765 67777766654332211 000
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EecCCCeeEEEEEec
Q 010125 363 DWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFE-IVFPCHFAVVCFRVS 429 (517)
Q Consensus 363 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-l~~~~~~~~v~f~~~ 429 (517)
..+.....+..|..++ |.+.+..++++..+++.++.+.|++.|.+. ++.|+..++++|.+.
T Consensus 227 ----~~G~~~s~~~a~l~~~--~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 227 ----TTGAVLSPFDSYLLMR--GLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred ----HhCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 0112235567777665 456689999999999999999999999864 455777889999985
No 231
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.74 E-value=8.6e-16 Score=157.30 Aligned_cols=310 Identities=10% Similarity=0.054 Sum_probs=186.2
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
++.+++++.+|.+ ..++|+|||+|+..++.+..- .+++.|+++..+|.+...++...|+
T Consensus 35 ~~e~~la~~~g~~---------~~v~~~sgt~aL~~~l~al~~----------~pGd~Viv~~~t~~~~~~~~~~~G~-- 93 (376)
T TIGR02379 35 RCETWLENRTGTK---------KALLTPSCTAALEMAALLLDI----------QPGDEVIMPSYTFVSTANAFVLRGA-- 93 (376)
T ss_pred HHHHHHHHHhCCC---------eEEEeCCHHHHHHHHHHHcCC----------CCcCEEEECCCCcHHHHHHHHHcCC--
Confidence 3445666767654 579999999998766654311 1667899999999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccC
Q 010125 217 KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC 296 (517)
Q Consensus 217 ~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~ 296 (517)
+++.++++++ ++.+|+++|+++++++++ +|+. ++++|...|+++|.++|++||+++++|+||+.+....
T Consensus 94 -~~v~vd~d~~-~~~~d~~~le~~i~~~tk------~Iip---~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~ 162 (376)
T TIGR02379 94 -KIVFVDIRPD-TMNIDETLIESAITHRTK------AIVP---VHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYK 162 (376)
T ss_pred -EEEEEecCCC-cCCCCHHHHHHhcCcCce------EEEE---eCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccC
Confidence 9999999863 478999999999976543 5553 4567999999999999999999999999997654321
Q ss_pred ccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCc-cccCCccccccccccCCCccccCCCCCCch
Q 010125 297 PEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNP-EYLKNKATESMQVVDYKDWQITLSRRFRSL 375 (517)
Q Consensus 297 ~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~~~al 375 (517)
.. .+..+..+.++++...|.+......|++++.+++...+.-.... +........ .....+. ....+.+++.-
T Consensus 163 ~~---~~g~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~--~~~~g~n~~~~ 236 (376)
T TIGR02379 163 GR---ALGSIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQFFR-GEVDKYT--WRDIGSSYLPS 236 (376)
T ss_pred Cc---ccCCCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccccc-cCCCcce--eeeecccCCcc
Confidence 11 11112233445555556665443578888887755432211100 000000000 0000000 01122333332
Q ss_pred HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--C-eEEec-CCC--e--eEEEEEecCCCcchhhhhhhhhcccc
Q 010125 376 KLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK--R-FEIVF-PCH--F--AVVCFRVSPSPVLMDKLKTKYVNCLL 447 (517)
Q Consensus 376 ~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~--~-~~l~~-~~~--~--~~v~f~~~~~~~~~~~~~~~~~~~~~ 447 (517)
.+-+++-.-..+.+.+++++..+++++..+.|+.++ + .++.. ++. . ..+++++.+.
T Consensus 237 ~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---------------- 300 (376)
T TIGR02379 237 ELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE---------------- 300 (376)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc----------------
Confidence 333333333356778888888899999999987754 2 23221 111 1 1233333221
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeee------e----E---C---------CEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 448 SEEEQINEFNRELLESINASGKAYMTHA------V----L---G---------GIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 448 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~------~----~---~---------g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
....++.+.|.++|+....+. . + . ....+.+- +++..+++|++++++.|+
T Consensus 301 -------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP-~~~~l~~~~~~~i~~~i~ 372 (376)
T TIGR02379 301 -------DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLP-LYYGLSKEDQARVIQTIC 372 (376)
T ss_pred -------CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEcc-CCCCCCHHHHHHHHHHHH
Confidence 013566777777776321000 0 0 0 02245554 477889999999999998
Q ss_pred HHH
Q 010125 506 QHL 508 (517)
Q Consensus 506 ~~~ 508 (517)
+..
T Consensus 373 ~~~ 375 (376)
T TIGR02379 373 DYL 375 (376)
T ss_pred HHh
Confidence 753
No 232
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.74 E-value=1.5e-15 Score=158.26 Aligned_cols=253 Identities=9% Similarity=0.041 Sum_probs=161.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
++...++|+++ ++++|.+ ..++++|||+|++.++.++...+..+.+. .+++.|+++..+|.+...
T Consensus 62 G~~~~~fe~~l----A~~~g~~---------~~v~~~sGt~al~~aL~al~~~~~~~~~~--~pGd~VIv~~~t~~a~~~ 126 (438)
T PRK15407 62 GRFNDAFEKKL----AEFLGVR---------YALLVNSGSSANLLAFSALTSPKLGDRAL--KPGDEVITVAAGFPTTVN 126 (438)
T ss_pred ChhHHHHHHHH----HHHhCCC---------eEEEECCHHHHHHHHHHHHhhccccccCC--CCCCEEEECCCCcHHHHH
Confidence 34455666654 4555553 46889999999998887653221111111 156789999999999999
Q ss_pred HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccc
Q 010125 208 AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 287 (517)
Q Consensus 208 aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDa 287 (517)
++...|+ .++.++++. .++.+|+++|+++++++++ +|++++ +.|...++++|.++|++||+++++|+
T Consensus 127 ~v~~~G~---~pv~vdvd~-~~~~id~~~le~~i~~~tk------aVi~~~---~~G~p~dl~~I~~la~~~gi~vIeDa 193 (438)
T PRK15407 127 PIIQNGL---VPVFVDVEL-PTYNIDASLLEAAVSPKTK------AIMIAH---TLGNPFDLAAVKAFCDKHNLWLIEDN 193 (438)
T ss_pred HHHHcCC---EEEEEecCC-CcCCcCHHHHHHHcCcCCe------EEEEeC---CCCChhhHHHHHHHHHHCCCEEEEEC
Confidence 9999999 999999875 3688999999999976543 566654 35777899999999999999999999
Q ss_pred ccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhh--cCCc-c---------ccCCccccc
Q 010125 288 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSL--STNP-E---------YLKNKATES 355 (517)
Q Consensus 288 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~--~~~~-~---------yl~~~~~~~ 355 (517)
||+.+....... ...+..+-.+++...|.+.+.- .|+++++++....... .... . +........
T Consensus 194 a~a~G~~~~g~~---~G~~gd~~~fSf~~~k~~~~ge-GG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~ 269 (438)
T PRK15407 194 CDALGSTYDGRM---TGTFGDIATLSFYPAHHITMGE-GGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQ 269 (438)
T ss_pred ccchhhhcCCee---eeccCceEEEeCCCCCCccccC-ceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccc
Confidence 998776543221 1112233345555667776543 5888888876533221 1100 0 000000000
Q ss_pred -cc-cccCC-Cc-cccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010125 356 -MQ-VVDYK-DW-QITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKR 412 (517)
Q Consensus 356 -~~-~~~~~-~~-~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~ 412 (517)
.. ...+. .+ ....+..++.-.+.+++-....+.+++++++..++++++.+.|..+++
T Consensus 270 ~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~ 330 (438)
T PRK15407 270 LGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLED 330 (438)
T ss_pred cccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 00 00000 00 011233344445566665556788899999999999999999988875
No 233
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.73 E-value=4.3e-16 Score=159.17 Aligned_cols=229 Identities=17% Similarity=0.122 Sum_probs=154.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|...++|+.+.+.. + + ..+++++|++|+..++.+... +++.|+++...|+...
T Consensus 49 ~~p~~~~Le~~lA~l~----~--~--------~~v~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~~~ 103 (366)
T PRK07582 49 SNPTWRALEAALGELE----G--A--------EALVFPSGMAAITAVLRALLR-----------PGDTVVVPADGYYQVR 103 (366)
T ss_pred CCccHHHHHHHHHHHc----C--C--------CEEEECCHHHHHHHHHHHhcC-----------CCCEEEEeCCCcHhHH
Confidence 5567777777655543 2 2 467888888888766654321 5567888888887766
Q ss_pred HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KAA----QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 kaa----~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
..+ ...|+ +++.++.+.. +. .+.+++ .+|++..++|++|.+.|+++|+++|+++|++
T Consensus 104 ~~~~~~l~~~G~---~v~~v~~~~~--~~--------~~~~~t------~lV~le~p~NPtg~v~di~~I~~~a~~~g~~ 164 (366)
T PRK07582 104 ALAREYLAPLGV---TVREAPTAGM--AE--------AALAGA------DLVLAETPSNPGLDVCDLAALAAAAHAAGAL 164 (366)
T ss_pred HHHHHHHhcCeE---EEEEECCCCh--HH--------HhccCc------eEEEEECCCCCCCCccCHHHHHHHHHHcCCE
Confidence 544 34688 8999987531 11 122222 3778889999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
++||++|+.+....+ . + .++|.++.++|||+++|.+ .|++++++++... .+.....+..
T Consensus 165 lvVD~t~~~~~~~~p-~----~--~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~-~l~~~~~~~g----------- 225 (366)
T PRK07582 165 LVVDNTTATPLGQRP-L----E--LGADLVVASDTKALTGHSDLLLGYVAGRDPELMA-AVERWRLLAG----------- 225 (366)
T ss_pred EEEECCCCCccccCc-h----h--cCCcEEEecccccccCCCCeeEEEEEcCcHHHHH-HHHHHHHHhC-----------
Confidence 999999964322111 1 1 1689999999999988766 5777766554322 2211111110
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec------CC-----------CeeE
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF------PC-----------HFAV 423 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~------~~-----------~~~~ 423 (517)
-....+..|..++. .+.+..++++..+++..+.+.|++.|.++-+. .| ..++
T Consensus 226 ---------~~~~~~~a~l~~r~--l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~ 294 (366)
T PRK07582 226 ---------AIPGPFEAWLAHRS--LGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGL 294 (366)
T ss_pred ---------CCCCHHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcce
Confidence 01134556666654 45677888999999999999999999876443 13 3678
Q ss_pred EEEEec
Q 010125 424 VCFRVS 429 (517)
Q Consensus 424 v~f~~~ 429 (517)
++|.+.
T Consensus 295 ~s~~~~ 300 (366)
T PRK07582 295 VSFELA 300 (366)
T ss_pred EEEEeC
Confidence 899885
No 234
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.73 E-value=4.8e-17 Score=147.17 Aligned_cols=166 Identities=23% Similarity=0.173 Sum_probs=126.7
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH-HHHHHcCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ-KAAQIVGID 215 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~-kaa~~~G~g 215 (517)
++.++++++++.+.. .+++++|||+|+..++.+++. ++..|+++...|.+.. ..+...|+
T Consensus 4 ~~~~~l~~~~~~~~~-------~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~- 64 (170)
T cd01494 4 ELEEKLARLLQPGND-------KAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGA- 64 (170)
T ss_pred HHHHHHHHHcCCCCC-------cEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCC-
Confidence 567888999863332 688999999999888887643 3456888889998888 88888899
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccccc
Q 010125 216 VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACI 295 (517)
Q Consensus 216 ~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~ 295 (517)
+++.++.+..+....+.+.+++.. ....|.+++++.+++++|...|+++|+++|+++|+++|+|++|+++...
T Consensus 65 --~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~ 137 (170)
T cd01494 65 --KPVPVPVDDAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP 137 (170)
T ss_pred --EEEEeccCCCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence 999999875332222322333322 2345778999999999999999999999999999999999999887765
Q ss_pred CccccccccCCCCCCeeeeccccccCCCCcceEEEEe
Q 010125 296 CPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVK 332 (517)
Q Consensus 296 ~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~ 332 (517)
..... ....++|+++.++|||++. .++|++++|
T Consensus 138 ~~~~~---~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 138 APGVL---IPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred ccccc---cccccCCEEEEEcccccCC-CceEEEEeC
Confidence 42211 1124799999999999988 689999875
No 235
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.73 E-value=9.4e-16 Score=157.54 Aligned_cols=305 Identities=11% Similarity=0.066 Sum_probs=184.7
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCC
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGI 214 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~ 214 (517)
.+++.+++++.+|.+ ..++++|||.|+..++.++.- .+++.|+++..+|.++..++...|+
T Consensus 33 ~~~~e~~la~~~g~~---------~~v~~~sgt~al~~~l~~~~~----------~~Gd~Viv~~~t~~~~~~~~~~~G~ 93 (375)
T PRK11706 33 TRRCQQWLEQRFGSA---------KVLLTPSCTAALEMAALLLDI----------QPGDEVIMPSYTFVSTANAFVLRGA 93 (375)
T ss_pred HHHHHHHHHHHhCCC---------eEEEECCHHHHHHHHHHHhCC----------CCCCEEEECCCCcHHHHHHHHHcCC
Confidence 345556777777764 478999999998766554310 1567899999999999999999999
Q ss_pred CCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccc
Q 010125 215 DVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC 294 (517)
Q Consensus 215 g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~ 294 (517)
+++.++++++ ++.+|+++|++++++.++ +|+.++ ++|...++++|.++|++||+++++|+||+.+..
T Consensus 94 ---~~v~~d~d~~-~~~~d~~~le~~i~~~tk------~i~~~~---~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~ 160 (375)
T PRK11706 94 ---KIVFVDIRPD-TMNIDETLIEAAITPKTR------AIVPVH---YAGVACEMDTIMALAKKHNLFVVEDAAQGVMST 160 (375)
T ss_pred ---EEEEEecCCC-cCCcCHHHHHHhcCCCCe------EEEEeC---CCCCccCHHHHHHHHHHcCCEEEEECccccccc
Confidence 9999999864 478999999999976443 555543 579889999999999999999999999976653
Q ss_pred cCccccccccCCCCCCeeeeccc--cccCCCCcceEEEEeCchhHHhh--hcC---CccccCCccccccccccCCCcccc
Q 010125 295 ICPEFRHFIDGVEGADSFSLNAH--KWFFATLDCCCLWVKDPRALVSS--LST---NPEYLKNKATESMQVVDYKDWQIT 367 (517)
Q Consensus 295 ~~~~~~~~~~g~~~aDsi~~~~h--K~l~~p~~~g~l~~~~~~~~~~~--~~~---~~~yl~~~~~~~~~~~~~~~~~~~ 367 (517)
... +. +.. ..|.-++|+| |.+..+ ..|++++.++....+. +.. ........ ......+ ..
T Consensus 161 ~~~--~~-~g~--~~~~~~~Sf~~~K~l~~g-~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~-~~ 227 (375)
T PRK11706 161 YKG--RA-LGT--IGHIGCFSFHETKNYTAG-EGGALLINDPALIERAEIIREKGTNRSQFFRG------QVDKYTW-VD 227 (375)
T ss_pred cCC--ee-eec--CcCEEEEeCCCCcccccc-CCeEEEECCHHHHHHHHHHHHcCCCcchhhcc------CCCccee-ee
Confidence 211 11 111 2355556666 999653 3465666665443221 110 00000000 0000000 11
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--C-eEEecCC-C----eeEEEEEecCCCcchhhhh
Q 010125 368 LSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK--R-FEIVFPC-H----FAVVCFRVSPSPVLMDKLK 439 (517)
Q Consensus 368 ~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~--~-~~l~~~~-~----~~~v~f~~~~~~~~~~~~~ 439 (517)
.+.++..-.+-+++-....+.++++.++..++++++.+.|.+++ + +.+...+ . ...+.+++.+.
T Consensus 228 ~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 299 (375)
T PRK11706 228 IGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL-------- 299 (375)
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc--------
Confidence 12222222333333333345678888888899999999998876 2 4332112 1 11233333221
Q ss_pred hhhhccccchHHHHHHHHHHHHHHHHhcCcEEEe---eee-------E---C---------CEeEEEEEecCCCCcHHHH
Q 010125 440 TKYVNCLLSEEEQINEFNRELLESINASGKAYMT---HAV-------L---G---------GIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~-------~---~---------g~~~lR~~~~~~~t~~~di 497 (517)
....++.+.|.++|+.... +.. + . ....+-+- +++..+++|+
T Consensus 300 ---------------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP-~~~~l~~~~~ 363 (375)
T PRK11706 300 ---------------EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLP-LFYNLTDVEQ 363 (375)
T ss_pred ---------------CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEecc-CCCCCCHHHH
Confidence 1135667777777764110 100 0 0 01234443 4677888999
Q ss_pred HHHHHHHHHHH
Q 010125 498 VVAWTVVQQHL 508 (517)
Q Consensus 498 ~~l~~~l~~~~ 508 (517)
+.+++.|++..
T Consensus 364 ~~i~~~i~~~~ 374 (375)
T PRK11706 364 RTVIDTILEFF 374 (375)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
No 236
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.73 E-value=7.2e-16 Score=157.98 Aligned_cols=220 Identities=17% Similarity=0.204 Sum_probs=151.3
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
...|....+|+. ++++.|.+ ..+++++|+.|+..++ .+.. +++.|++++..|.+.
T Consensus 47 ~~~p~~~~Le~~----la~l~g~~---------~al~~~SG~~Al~~~l-~~l~-----------pGd~Vi~~~~~y~~t 101 (380)
T PRK06176 47 SGNPTRFALEEL----IADLEGGV---------KGFAFASGLAGIHAVF-SLFQ-----------SGDHVLLGDDVYGGT 101 (380)
T ss_pred CCChhHHHHHHH----HHHHhCCC---------CEEEECCHHHHHHHHH-HHcC-----------CCCEEEEcCCChhHH
Confidence 345666666654 66666654 3477788887775433 2221 566788888877644
Q ss_pred H----HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC
Q 010125 206 Q----KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 281 (517)
Q Consensus 206 ~----kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi 281 (517)
. ..+...|+ +++.++. .|+++++++++++++ +|++..+++++|.+.|+++|+++|++||+
T Consensus 102 ~~~~~~~~~~~gi---~v~~vd~-------~d~e~l~~ai~~~t~------lV~lesP~Nptg~~~di~~I~~la~~~gi 165 (380)
T PRK06176 102 FRLFDKVLVKNGL---SCTIIDT-------SDLSQIKKAIKPNTK------ALYLETPSNPLLKITDLAQCASVAKDHGL 165 (380)
T ss_pred HHHHHHHHHhcCe---EEEEcCC-------CCHHHHHHhcCcCce------EEEEECCCCCCceecCHHHHHHHHHHcCC
Confidence 3 34556677 7777753 389999999876543 78888999999999999999999999999
Q ss_pred eEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 282 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
+++||++|+......+ . . .++|.+++++||++++|.+ .|++.++++.... .+. .+..
T Consensus 166 ~vivD~t~a~~~~~~p-~-----~-~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~-~~~----~~~~--------- 224 (380)
T PRK06176 166 LTIVDNTFATPYYQNP-L-----L-LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQ-EIA----FFQN--------- 224 (380)
T ss_pred EEEEECCccccccCCc-c-----c-cCCCEEEecCceeccCCccceeeEEEecHHHHHH-HHH----HHHH---------
Confidence 9999999976543221 1 1 2799999999999988754 6666666554322 111 0100
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
..+....+...|..++ |.+.+..++++..+++..+.+.|++.|.++-+
T Consensus 225 -------~~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v 272 (380)
T PRK06176 225 -------AIGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKV 272 (380)
T ss_pred -------HhcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEE
Confidence 0111123344565554 56777889999999999999999999887544
No 237
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.73 E-value=4.6e-15 Score=151.55 Aligned_cols=302 Identities=14% Similarity=0.072 Sum_probs=188.8
Q ss_pred HHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccC
Q 010125 110 LGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGREN 189 (517)
Q Consensus 110 ~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~ 189 (517)
+.+.+.+.+. ....|. .++...+.+++++| ++++++ +.++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~-~~~~Y~-~~~~~~lr~~ia~~----~~~~~~-------~I~it~G~~~al~~~~~~~~~---------- 104 (357)
T PRK14809 48 AVEAIREAAE-RVHSYP-KASHADLTAALADR----WDVSPE-------QVWLANGGDGALDYLARAMLD---------- 104 (357)
T ss_pred HHHHHHHHHh-hhhcCC-CCCHHHHHHHHHHH----hCCCcc-------eEEECCCHHHHHHHHHHHhcC----------
Confidence 3344544432 123443 34555566555554 566654 689999999988766654422
Q ss_pred CCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccCh
Q 010125 190 ISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPL 269 (517)
Q Consensus 190 ~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl 269 (517)
+++.|++.++++..+...+...|. .++.+|++.++++.++++++++.+. . +.+|+++.++||||.+-+.
T Consensus 105 -~gd~V~v~~P~y~~~~~~~~~~g~---~~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~ 173 (357)
T PRK14809 105 -PGDTVLVPDPGFAYYGMSARYHHG---EVREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPL 173 (357)
T ss_pred -CCCEEEEeCCChHHHHHHHHHcCC---eEEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCH
Confidence 566788888998888888888999 8999998754457888888777652 1 2267778999999999888
Q ss_pred hHHHHHHHHh--CCeEEcccccccccccCccccccccCCCCC-C-eeeeccccccC-CCCcceEEEEeCchhHHhhhcCC
Q 010125 270 KPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVEGA-D-SFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTN 344 (517)
Q Consensus 270 ~eI~~i~~~~--gi~lhvDaA~g~~~~~~~~~~~~~~g~~~a-D-si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~ 344 (517)
+++.++++.. ++++++|.+|+.+... +.. ...+... . .+..++.|.++ ....+|+++..+. .. +.+...
T Consensus 174 ~~~~~l~~~~~~~~~iI~De~y~~~~~~-~~~---~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~-~~-~~~~~~ 247 (357)
T PRK14809 174 DEVEALAERTDEETLVVVDEAYGEFAER-PSA---VALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPEE-WA-DAYARV 247 (357)
T ss_pred HHHHHHHHhCccCcEEEEechhhhccCC-chh---HHHHhhCCCEEEEecchhHhcCcchhheeeecCHH-HH-HHHHHh
Confidence 7777777654 8899999999765421 111 1111121 2 34567999997 5588999887533 22 222110
Q ss_pred ccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeE
Q 010125 345 PEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAV 423 (517)
Q Consensus 345 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~ 423 (517)
.. .+ ....+..++++..+. .+.+++..+...+..+++.+.|... .+ ++..+.
T Consensus 248 ----~~------------~~------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~-~~~g~f 300 (357)
T PRK14809 248 ----NT------------PF------AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP----TW-ESAGNF 300 (357)
T ss_pred ----CC------------CC------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc----cC-CCCCCE
Confidence 00 00 012334445555443 3345555666666677777777542 12 455555
Q ss_pred EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 010125 424 VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTV 503 (517)
Q Consensus 424 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~ 503 (517)
+.+++. . ..++.+.+.+.|+.+..+..+....++|+++. +.+++++++++
T Consensus 301 ~~~~~~-~-------------------------~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~~----~~~~~~~~l~~ 350 (357)
T PRK14809 301 VLAEVG-D-------------------------ASAVAEAAQERGVIVRDCTSFGLPECIRITCG----TREETERAVEV 350 (357)
T ss_pred EEEECC-C-------------------------HHHHHHHHHHCCEEEEECccCCCCCeEEEecC----CHHHHHHHHHH
Confidence 555542 1 13456667677876655554443568999974 35799999999
Q ss_pred HHHHH
Q 010125 504 VQQHL 508 (517)
Q Consensus 504 l~~~~ 508 (517)
|+++.
T Consensus 351 L~~~l 355 (357)
T PRK14809 351 LNEVL 355 (357)
T ss_pred HHHHh
Confidence 88764
No 238
>PRK05839 hypothetical protein; Provisional
Probab=99.73 E-value=3.7e-15 Score=153.14 Aligned_cols=318 Identities=12% Similarity=0.060 Sum_probs=190.6
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
+..+.+.+....+. ...|....+..++.+.+++|+++..|.+-. ...+++|+|+++++...+.+....
T Consensus 39 ~~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~-----~~~I~it~G~~~al~~~~~~~~~~------ 106 (374)
T PRK05839 39 PKFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELK-----ENELIPTFGTREVLFNFPQFVLFD------ 106 (374)
T ss_pred CHHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----cceEEEecCcHHHHHHHHHHHhcC------
Confidence 35556666554432 345655556778999999999998885322 127899999998876554443210
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
.++..|++..+++..+..+++..|+ +++.+|.+.++++.+|+.+.+ +. . +.+|+++.++||||.+
T Consensus 107 ---~~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~~~--~~-~------~k~v~i~nP~NPTG~~ 171 (374)
T PRK05839 107 ---KQNPTIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNEKE--LQ-E------VDLVILNSPNNPTGRT 171 (374)
T ss_pred ---CCCCEEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcchhh--hc-c------ccEEEEeCCCCCcCcc
Confidence 0456788888999999999999999 999999976555677765432 21 1 2367778999999998
Q ss_pred cC---hhHHHHHHHHhCCeEEcccccccccccCcccccccc-----CCCC-CC-eeeecccccc-CCCCcceEEEEeCch
Q 010125 267 DP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-----GVEG-AD-SFSLNAHKWF-FATLDCCCLWVKDPR 335 (517)
Q Consensus 267 dp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~-----g~~~-aD-si~~~~hK~l-~~p~~~g~l~~~~~~ 335 (517)
-+ +++|+++|++||+|+++|.+|+.... ......... +... -. .++.++.|.+ .....+|+++.. +.
T Consensus 172 ~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~-~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~-~~ 249 (374)
T PRK05839 172 LSLEELIEWVKLALKHDFILINDECYSEIYE-NTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD-AS 249 (374)
T ss_pred cCHHHHHHHHHHHHHcCCEEEeccchhhccc-CCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC-HH
Confidence 44 77888889999999999999976432 111111111 0001 12 4566799975 566889998863 33
Q ss_pred hHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 336 ALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 336 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
. .+.+.....++.. +. ..+...++...+ ..+.++++.++..++.+.+.+.| ++.
T Consensus 250 ~-~~~~~~~~~~~~~-----------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~ 304 (374)
T PRK05839 250 I-LKKYKAYRTYLGC-----------------AS---PLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT 304 (374)
T ss_pred H-HHHHHHHHhhcCC-----------------CC---ChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC
Confidence 2 2222111111100 00 111112222222 23344555566666666665554 222
Q ss_pred EecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHh-cCcEEEeeeeEC----CEeEEEEEecC
Q 010125 415 IVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINA-SGKAYMTHAVLG----GIYAIRFATGA 489 (517)
Q Consensus 415 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----g~~~lR~~~~~ 489 (517)
.++....+.+++. . ..++.+++.+ .|+...++..+. +..++|++++.
T Consensus 305 --~p~gg~fi~~~~~-~-------------------------~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~ 356 (374)
T PRK05839 305 --IPPATFYVWLPVD-N-------------------------DEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVY 356 (374)
T ss_pred --CCCeeEEEEEeCC-C-------------------------hHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecC
Confidence 2333334444442 2 1345556654 776655543332 24799999952
Q ss_pred CCCcHHHHHHHHHHHHHHHH
Q 010125 490 TLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 490 ~~t~~~di~~l~~~l~~~~~ 509 (517)
+++++.++++.|.++.+
T Consensus 357 ---~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 357 ---DTPKLEKALEIIKTYLE 373 (374)
T ss_pred ---CHHHHHHHHHHHHHHhh
Confidence 57789999988887653
No 239
>PRK05939 hypothetical protein; Provisional
Probab=99.73 E-value=6.3e-16 Score=159.10 Aligned_cols=239 Identities=13% Similarity=0.096 Sum_probs=152.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCch---
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHC--- 203 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~--- 203 (517)
..|....+|++ ++++.|.. ..+++++|+.|+..++.+... +++.|++++..|.
T Consensus 45 g~p~~~~lE~~----la~leg~~---------~~v~~ssG~~Ai~~~l~all~-----------~Gd~Vv~~~~~y~~t~ 100 (397)
T PRK05939 45 GTPTTAALEAK----ITKMEGGV---------GTVCFATGMAAIAAVFLTLLR-----------AGDHLVSSQFLFGNTN 100 (397)
T ss_pred CCHHHHHHHHH----HHHHhCCC---------eEEEeCCHHHHHHHHHHHHcC-----------CCCEEEECCCccccHH
Confidence 55777778766 45566654 346777778888776655422 5566788877654
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 204 ALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 204 s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
++.+.+...|+ +++.++. .|+++|+++++++++ +|+++.++|++|.+.|+++|+++|++||+++
T Consensus 101 ~~~~~l~~~G~---~v~~v~~-------~d~e~l~~~l~~~tk------lV~vesp~NptG~v~dl~~I~~la~~~gi~l 164 (397)
T PRK05939 101 SLFGTLRGLGV---EVTMVDA-------TDVQNVAAAIRPNTR------MVFVETIANPGTQVADLAGIGALCRERGLLY 164 (397)
T ss_pred HHHHHHHhcCC---EEEEECC-------CCHHHHHHhCCCCCe------EEEEECCCCCCCCHHhHHHHHHHHHHcCCEE
Confidence 44556677788 8888875 278999999876543 7888999999999999999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCCCc-ceEEEEeCchh-HHhhhcCCccccCCccccccccccC
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD-CCCLWVKDPRA-LVSSLSTNPEYLKNKATESMQVVDY 361 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~-~g~l~~~~~~~-~~~~~~~~~~yl~~~~~~~~~~~~~ 361 (517)
+||++|+.+...-+. . -++|.+..++||+++++-+ .|.+++.+... ..........|...... .......
T Consensus 165 ivD~t~a~~~~~~~~--~-----~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 236 (397)
T PRK05939 165 VVDNTMTSPWLFRPK--D-----VGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQ-QWGLTQI 236 (397)
T ss_pred EEECCcccccccCcc--c-----cCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchh-hHHHHHH
Confidence 999999765432111 1 1799999999999986522 23333322210 00000000000000000 0000000
Q ss_pred CC-ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010125 362 KD-WQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEI 415 (517)
Q Consensus 362 ~~-~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l 415 (517)
.. ..-..+-...+...|..++ |.+.+..+++++.+++..+++.|++.|.++-
T Consensus 237 ~~~~~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~~p~V~~ 289 (397)
T PRK05939 237 RKKGLRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEAHPKVAR 289 (397)
T ss_pred HHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccE
Confidence 00 0001122234455665554 7788999999999999999999999988743
No 240
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1.3e-15 Score=156.12 Aligned_cols=219 Identities=16% Similarity=0.209 Sum_probs=151.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|....+|+ .++++.|.+ ..+++++|+.++..++ .... +++.|+++...|.+..
T Consensus 48 ~~p~~~~Le~----~lA~l~g~~---------~~~~~~sG~aai~~~~-~~l~-----------~Gd~Viv~~~~y~~~~ 102 (377)
T PRK07671 48 GNPTRAALEE----LIAVLEGGH---------AGFAFGSGMAAITAVM-MLFS-----------SGDHVILTDDVYGGTY 102 (377)
T ss_pred CChHHHHHHH----HHHHHhCCC---------ceEEeCCHHHHHHHHH-HHhC-----------CCCEEEECCCccchHH
Confidence 4455556654 566777754 3477788876654333 2211 5567888888887433
Q ss_pred H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 K----AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 k----aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
. .+...|+ +++.++. .|+++++++|+++++ +|+++.++|++|.+.|+++|+++|+++|++
T Consensus 103 ~~~~~~~~~~G~---~v~~v~~-------~d~~~l~~ai~~~tk------lV~le~P~NPtg~~~dl~~I~~la~~~g~~ 166 (377)
T PRK07671 103 RVMTKVLNRFGI---EHTFVDT-------SNLEEVEEAIRPNTK------AIYVETPTNPLLKITDIKKISTIAKEKGLL 166 (377)
T ss_pred HHHHHHHhcCCe---EEEEECC-------CCHHHHHHhcCCCCe------EEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3 3344677 7888763 388999999976553 788899999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
++||++|+......+ . . .++|+++.+++||++.|.+ .|+++++++....+.. ....+.
T Consensus 167 lvvD~a~~~~~~~~p-~-~-----~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~-~~~~~~------------ 226 (377)
T PRK07671 167 TIVDNTFMTPYWQSP-I-S-----LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLH-FVQNST------------ 226 (377)
T ss_pred EEEECCCCccccCCh-h-h-----hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHH-HHHHhh------------
Confidence 999999976443221 1 1 2689999999999998753 6777776654432221 110111
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
+-.......|..++ |...+..++++..+++..+.+.|++.|++.-+
T Consensus 227 --------g~~~~~~~a~l~~~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v 272 (377)
T PRK07671 227 --------GGILGPQDSWLLLR--GLKTLGIRMEEHETNSRAIAEFLNNHPAVNKV 272 (377)
T ss_pred --------cCCCCHHHHHHHHc--CcChHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 11224456666665 45667779999999999999999999887544
No 241
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.72 E-value=5.1e-15 Score=153.70 Aligned_cols=327 Identities=12% Similarity=0.060 Sum_probs=200.7
Q ss_pred HHHHHHHHhccc-ccccccccChhhHHHHHHHHHHHHHHcCC--CcccccCCCCceE--EcCCchHHHHHHHHHHHHHHH
Q 010125 108 GFLGEMLSSGFN-IVGFNWISSPAATELENIVMDWLGQMLKL--PKSFLFSGNGGGV--IQGTTCEAILCTLTAARDRVL 182 (517)
Q Consensus 108 ~~~~~~l~~~~n-~~~~~~~~sp~~~~lE~~v~~~l~~l~g~--~~~~~~~~~~~g~--~t~ggt~a~~~al~~ar~~~~ 182 (517)
..+.+.+..... .....|....+..++.+++++|+.+..+. +++ .++ .|.||+.|...++.+.+. +.
T Consensus 50 ~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~-------~v~~~~t~G~~~al~~~~~~l~~-~~ 121 (404)
T PTZ00376 50 ESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEK-------RIATVQALSGTGALRLGFEFLKR-FL 121 (404)
T ss_pred hHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccC-------eEEEeeccCcchHHHHHHHHHHH-hc
Confidence 344444433332 23357877788899999999998665432 222 455 488999887666544321 11
Q ss_pred HHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCc
Q 010125 183 NKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA 262 (517)
Q Consensus 183 ~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~ 262 (517)
. +++.|++.+++|..+..+++.+|+ +++.+|+..++++.+|++.+++++++... ...+++.+.++||
T Consensus 122 ~-------~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~NP 188 (404)
T PTZ00376 122 P-------AGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHNP 188 (404)
T ss_pred C-------CCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCCC
Confidence 1 667899999999999999999999 99999984333579999999999864321 1246777899999
Q ss_pred cccc---cChhHHHHHHHHhCCeEEcccccccccccCc--cccccccCCCCC-C-eeeeccccccC-CCCcceEEE--Ee
Q 010125 263 ITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHFIDGVEGA-D-SFSLNAHKWFF-ATLDCCCLW--VK 332 (517)
Q Consensus 263 ~G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~--~~~~~~~g~~~a-D-si~~~~hK~l~-~p~~~g~l~--~~ 332 (517)
||.+ +.+++|+++|++||+|+++|.+|..+..... .......-.+.. . .+..++.|.++ ..+.+|+++ +.
T Consensus 189 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~~~ 268 (404)
T PTZ00376 189 TGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNMGLYGERIGALHIVCA 268 (404)
T ss_pred CCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcccccccccceEEEEeC
Confidence 9988 4578888999999999999999976554210 111110000111 2 45566999998 568899985 44
Q ss_pred CchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcH--------HHHHHHHHHHHHHHHHHH
Q 010125 333 DPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGV--------ANLRHFLRSHVNMAKLFE 404 (517)
Q Consensus 333 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~i~~~~~~a~~l~ 404 (517)
+++...........+... ...+ ...+..+++...+.. +.++++.++..++++.+.
T Consensus 269 ~~~~~~~l~~~~~~~~~~--------------~~~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~l~ 331 (404)
T PTZ00376 269 NKEEAANVLSQLKLIIRP--------------MYSS---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQLLY 331 (404)
T ss_pred CHHHHHHHHHHHHHHHhh--------------hcCC---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544221111000000000 0000 022333444433321 123445567778888899
Q ss_pred HHHhcCC---CeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEe
Q 010125 405 RLVSGDK---RFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIY 481 (517)
Q Consensus 405 ~~l~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~ 481 (517)
+.|++.. +++.+ .|+.+++.|--. . .++.++|.++..+++.+. +
T Consensus 332 ~~L~~~~~~~~~~~~-~p~gg~f~~~~~-~--------------------------~~~~~~L~~~~~v~v~p~---~-- 378 (404)
T PTZ00376 332 DELKALGSPGDWEHI-INQIGMFSFTGL-T--------------------------KEQVERLIEKYHIYLLDN---G-- 378 (404)
T ss_pred HHHHhcCCCCccccc-ccCceEEEecCC-C--------------------------HHHHHHHHHhCCEeecCC---C--
Confidence 9988762 24333 455555444211 1 234555655533444332 2
Q ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 482 AIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 482 ~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
|+++++ .+.++++.++++|+++..
T Consensus 379 --Ris~~~--~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 379 --RISVAG--LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred --eEEEec--cCHHhHHHHHHHHHHHHh
Confidence 999853 567799999999998754
No 242
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.72 E-value=2.3e-15 Score=158.40 Aligned_cols=372 Identities=10% Similarity=0.053 Sum_probs=211.4
Q ss_pred ChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHH-HHHcCC--CcccccCCCCceEEcCCchHHHHHHHHHHHH-H
Q 010125 105 SIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWL-GQMLKL--PKSFLFSGNGGGVIQGTTCEAILCTLTAARD-R 180 (517)
Q Consensus 105 ~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l-~~l~g~--~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~-~ 180 (517)
.+|..+.++...... ..|...++..++.+++++++ .+.++. ++.. ...+++|+|+++|+..++.+... .
T Consensus 113 ~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~----~~~I~vT~Ga~~al~~~~~aL~~~~ 185 (527)
T PRK09275 113 DADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKG----EFDLFAVEGGTAAMCYIFDSLKENG 185 (527)
T ss_pred CCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCC----cCeEEEeCCHHHHHHHHHHHHhhhh
Confidence 346666665544432 24888888888888888755 443332 1210 12689999999998877765321 1
Q ss_pred HHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccC
Q 010125 181 VLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGT 260 (517)
Q Consensus 181 ~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gt 260 (517)
+++ +++.|++.++++..+...+++.|.|. .++.++++++++|.+|+++|++++++.++ +|+++.++
T Consensus 186 ll~-------pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~~l~~~~~~~tk------ai~l~nP~ 251 (527)
T PRK09275 186 LLK-------AGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDSELEKLRDPSIK------ALFLVNPS 251 (527)
T ss_pred cCC-------CCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHHHHHhhcCCCCC------EEEEeCCc
Confidence 111 66778888899999999999987622 44555555545689999999998765544 78888999
Q ss_pred CccccccC---hhHHHHHHHH--hCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCc
Q 010125 261 TAITAVDP---LKPLCDVAKQ--FGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDP 334 (517)
Q Consensus 261 t~~G~idp---l~eI~~i~~~--~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~ 334 (517)
||||.+-+ +++|+++|++ +|+|+++|.+|+.+.. .+.........--.+..++.|.++ ..+..|+++..+.
T Consensus 252 NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 252 NPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence 99999866 7888889965 4999999999986542 222222212122355567999996 5578898887654
Q ss_pred hhHHhhhc------------------CCccccCCccccccccccCCCc-cccCCCCC-CchHHHHHHHHh--cHHHHHHH
Q 010125 335 RALVSSLS------------------TNPEYLKNKATESMQVVDYKDW-QITLSRRF-RSLKLWFVIRNY--GVANLRHF 392 (517)
Q Consensus 335 ~~~~~~~~------------------~~~~yl~~~~~~~~~~~~~~~~-~~~~sr~~-~al~~~~~l~~~--g~~g~~~~ 392 (517)
..+...+. ..|.-+.--..-.........+ +...+... .+.+++.....+ +.+..+++
T Consensus 329 ~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~ 408 (527)
T PRK09275 329 NVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAM 408 (527)
T ss_pred hHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 22211110 1111000000000000000000 11111100 001111111212 34455666
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEe-cCCCeeEEEEEecCCCcchhhhhhhhhccccchH-HHH--HHHHHHHHHHHH-hc
Q 010125 393 LRSHVNMAKLFERLVSGDKRFEIV-FPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEE-EQI--NEFNRELLESIN-AS 467 (517)
Q Consensus 393 i~~~~~~a~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~l~~~l~-~~ 467 (517)
.+.+.++.+.+.+.| ++.+. .+|....++|.-.+.-... ..+... ..+ +....++..+|. +.
T Consensus 409 ~~~~~~Rr~~l~~~L----g~~~~~~~p~g~fY~~~di~~~~~~---------~~g~~f~~~l~~~~~~~~f~~~Ll~e~ 475 (527)
T PRK09275 409 KDIIRRRYKALYEGL----GLPEPEDPNNAAYYTLIDLEEWAEK---------NYGKEFADYLKKNYSPVDLLFRLAEET 475 (527)
T ss_pred HHHHHHHHHHHHHHc----CCCCcCCCCCeeEEEEEEhHHhhhh---------ccCchhhhhhhccCCHHHHHHHHHhcC
Confidence 777777777777777 22222 3566666665432210000 000000 000 001234445554 45
Q ss_pred CcEEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhhc
Q 010125 468 GKAYMTHAVLG-GIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQSAF 515 (517)
Q Consensus 468 g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~~~ 515 (517)
|++.++++.+. +..++|+|+.+ .+++++.++.++|+++.++...++
T Consensus 476 gV~v~PG~~Fg~~~~~vRis~a~--~~~~~~~~~~~rl~~~l~~y~~~~ 522 (527)
T PRK09275 476 GVVLLPGGGFGGPEWSVRVSLAN--LNEEDYAKIGKAIRKLLDEYYEEY 522 (527)
T ss_pred CEEEeCchhhCCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777776664 25689999964 477799999999999988877655
No 243
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.72 E-value=1.6e-17 Score=162.77 Aligned_cols=263 Identities=16% Similarity=0.150 Sum_probs=166.1
Q ss_pred hHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 106 IAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 106 ~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
.|.++..+ ...|.....|..++...++|+. +++++|.+ ..+|+++||+||..++.+...
T Consensus 8 ~~~m~~a~--~~a~~gd~~Yg~D~~~~~l~~~----i~~l~g~e---------~a~f~~sGT~An~~al~~~~~------ 66 (290)
T PF01212_consen 8 TPAMLEAM--AAANVGDDAYGEDPTTARLEER----IAELFGKE---------AALFVPSGTMANQLALRAHLR------ 66 (290)
T ss_dssp -HHEEHHH--HHTTSB-CCTTSSHHHHHHHHH----HHHHHTSS---------EEEEESSHHHHHHHHHHHHHH------
T ss_pred CHHHHHHH--HccccCCcccCCChhHHHHHHH----HHHHcCCC---------EEEEeCCCChHHHHHHHHHHh------
Confidence 34444444 2334434478888888877765 55677776 358999999999999988763
Q ss_pred cccCCCCeEEEeCCCCchHHHHH---HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCc
Q 010125 186 GRENISKLIVYGSDQTHCALQKA---AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA 262 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~ka---a~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~ 262 (517)
+...|++.+.+|..+... ..+.|+ +++.+|.+. .|.+|+++|++.+........+|.+|.++..++.
T Consensus 67 -----~~~~vi~~~~aHi~~~E~ga~~~~~G~---~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~ 136 (290)
T PF01212_consen 67 -----PGESVICADTAHIHFDETGAIEELSGA---KLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTEL 136 (290)
T ss_dssp -----TTEEEEEETTEHHHHSSTTHHHHHTTC---EEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTT
T ss_pred -----cCCceeccccceeeeeccchhhHhcCc---EEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcC
Confidence 666789999999877652 255788 899998763 3799999999999885442335667777776665
Q ss_pred c-ccc---cChhHHHHHHHHhCCeEEcccccccccccC--ccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchh
Q 010125 263 I-TAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACIC--PEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRA 336 (517)
Q Consensus 263 ~-G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~--~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~ 336 (517)
. |.+ +.|++|.++|++||+.+|+|||.-+..... ...+... ..+|+++++++|.+++| .|.+++-+++.
T Consensus 137 ~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~---~~~D~v~~~~tK~~g~~--~Gavl~~~~~~ 211 (290)
T PF01212_consen 137 AGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIA---AGADSVSFGGTKNGGAP--GGAVLAGNKEF 211 (290)
T ss_dssp TTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHH---TTSSEEEEETTSTT-SS--SEEEEEESHHH
T ss_pred CCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHh---hhCCEEEEEEEcccccc--cceEEEechHH
Confidence 3 655 568888999999999999999864333211 1122222 58999999999999987 44455545543
Q ss_pred HHhhhcCCccccCCccccccccccCCCccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010125 337 LVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKL---WFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRF 413 (517)
Q Consensus 337 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~ 413 (517)
+.+.+.. ..++.+.. |..+.+.+ +......+.+....+..+..+++++|.+.|+.+ ++
T Consensus 212 i~~~~~~-~k~~gg~~-----------------~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~ 272 (290)
T PF01212_consen 212 IAKARRQ-RKRLGGGM-----------------RQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GG 272 (290)
T ss_dssp HHHHHHH-HHHHTHHH-----------------HHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CE
T ss_pred HHHHHHH-HHHhccCe-----------------eecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 3333211 11121100 00011111 111111222333667788899999999999998 55
Q ss_pred EEecCCCeeE
Q 010125 414 EIVFPCHFAV 423 (517)
Q Consensus 414 ~l~~~~~~~~ 423 (517)
.+..+++++.
T Consensus 273 ~~~~~~~tn~ 282 (290)
T PF01212_consen 273 VLPRPVETNQ 282 (290)
T ss_dssp EEETTSS-HH
T ss_pred cccCCCCCcE
Confidence 5665655543
No 244
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.72 E-value=3.2e-15 Score=153.19 Aligned_cols=308 Identities=12% Similarity=0.078 Sum_probs=189.2
Q ss_pred HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCC-cccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 108 GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 108 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
..+.+.+....+. ..|....+..++.+.+++|+.+..|.+ -+ ...+++|+|+++++..++.+..-.
T Consensus 43 ~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~~i~~~~~~l~~~------ 109 (364)
T PRK07865 43 PVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLD-----PAAVLPVIGSKELVAWLPTLLGLG------ 109 (364)
T ss_pred HHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCC-----cccEEEccChHHHHHHHHHHHcCC------
Confidence 4455555543332 256666677899999999999988764 22 137899999998876544333111
Q ss_pred ccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++.|++.+++|..+..+++.+|+ +++.++. ++++++ . .+.+|+++.++|+||.+
T Consensus 110 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~---------~~~l~~---~------~~~~v~~~~p~NPtG~~ 164 (364)
T PRK07865 110 ----PGDVVVIPELAYPTYEVGARLAGA---TVVRADS---------LTELGP---Q------RPALIWLNSPSNPTGRV 164 (364)
T ss_pred ----CCCEEEECCCCcccHHHHHHhcCC---EEEecCC---------hhhCCc---c------cceEEEEcCCCCCCCcc
Confidence 566788899999999999999999 7777642 222221 1 23477777899999987
Q ss_pred c---ChhHHHHHHHHhCCeEEcccccccccccCcccccccc----CCC-CCCeeeeccccccC-CCCcceEEEEeCchhH
Q 010125 267 D---PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID----GVE-GADSFSLNAHKWFF-ATLDCCCLWVKDPRAL 337 (517)
Q Consensus 267 d---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~----g~~-~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~ 337 (517)
- .+++|.++|++||+|+++|.+|+......+.. ..+. +.. .-..++.+++|.++ ....+|+++. +++..
T Consensus 165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~ 242 (364)
T PRK07865 165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPV-SILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALV 242 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCC-ccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHH
Confidence 4 47888999999999999999997654311111 1110 101 12366778999985 4466787754 33332
Q ss_pred HhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 338 VSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 338 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
. .+.....+.. + ....+...++...+. .+.+++..+...++++.+.+.|++. ++.+.
T Consensus 243 ~-~~~~~~~~~~--------------~------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 300 (364)
T PRK07865 243 A-ELLEVRKHAG--------------M------MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVD 300 (364)
T ss_pred H-HHHHHHHhcC--------------C------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc
Confidence 2 2211100000 0 001222222333332 2345666677778888899999886 77654
Q ss_pred cCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC--CEeEEEEEecCCCCcH
Q 010125 417 FPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG--GIYAIRFATGATLTEK 494 (517)
Q Consensus 417 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~ 494 (517)
.|+.+++.+.-.+.. ...+.+.|.+.|+...++..+. +..++|++++. ++
T Consensus 301 -~~~~~~~~~~~~~~~------------------------~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~~---~~ 352 (364)
T PRK07865 301 -HSEAGLYLWATRGED------------------------CWDTVAWLAERGILVAPGDFYGPAGAQHVRVALTA---TD 352 (364)
T ss_pred -CCCccEEEEEeCCCC------------------------HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEecC---CH
Confidence 455554433221210 1345566777887665544332 35699999964 47
Q ss_pred HHHHHHHHHHH
Q 010125 495 RHVVVAWTVVQ 505 (517)
Q Consensus 495 ~di~~l~~~l~ 505 (517)
++++++++.|+
T Consensus 353 ~~~~~~~~~l~ 363 (364)
T PRK07865 353 ERIAAAVERLA 363 (364)
T ss_pred HHHHHHHHHhh
Confidence 79999988774
No 245
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.72 E-value=1.1e-14 Score=148.90 Aligned_cols=309 Identities=11% Similarity=0.030 Sum_probs=185.4
Q ss_pred HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 108 GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 108 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
..+.+.+...+.. ...|.. +....+.+.+++|+ +++++ ..++|+|+++++..++.+. .
T Consensus 38 ~~~~~a~~~~~~~-~~~Y~~-~~~~~Lr~aia~~~----~v~~~-------~I~it~G~~~~i~~~~~~l-~-------- 95 (360)
T PRK07392 38 ESVIAAIQSALSA-LRHYPD-PDYRELRLALAQHH----QLPPE-------WILPGNGAAELLTWAGREL-A-------- 95 (360)
T ss_pred HHHHHHHHHHHHH-hhcCCC-cCHHHHHHHHHHHh----CcChh-------hEEECCCHHHHHHHHHHHh-C--------
Confidence 3444444443332 233432 33445665555554 77665 6899999998876655432 1
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCc---ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSY---GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~---~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
++..|++.++++..+...++.+|+ +++.+|++.++.+ ..+++.+++... .+.+++++.++||||
T Consensus 96 ---~g~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~nP~NPTG 162 (360)
T PRK07392 96 ---QLRAVYLITPAFGDYRRALRAFGA---TVKELPLPLDQPSPGLTLRLQTLPPQLT-------PNDGLLLNNPHNPTG 162 (360)
T ss_pred ---CCCeEEEECCCcHHHHHHHHHcCC---eEEEEecccccCCcccccCHHHHHHhcc-------CCCEEEEeCCCCCCC
Confidence 233577888999999999999999 9999999754333 245555544321 234788889999999
Q ss_pred cccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCC-C-eeeeccccccC-CCCcceEEEEeCchhHHhhh
Q 010125 265 AVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA-D-SFSLNAHKWFF-ATLDCCCLWVKDPRALVSSL 341 (517)
Q Consensus 265 ~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~a-D-si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~ 341 (517)
.+-+.++|.++|+++++ +++|.+|..+.... ........+... . .+..++.|.++ ....+|+++..+ .... .+
T Consensus 163 ~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~-~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~-~~~~-~~ 238 (360)
T PRK07392 163 KLWSREAILPLLEQFAL-VVVDEAFMDFLPPD-AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP-DRLQ-RW 238 (360)
T ss_pred CCcCHHHHHHHHHHCCE-EEEECchhhhccCc-cccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH-HHHH-HH
Confidence 99999999999999985 66799997665321 111111111111 2 45567999998 668899988743 2222 22
Q ss_pred cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHH-HHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 010125 342 STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANL-RHFLRSHVNMAKLFERLVSGDKRFEIVFPCH 420 (517)
Q Consensus 342 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~-~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~ 420 (517)
...... + ....+..+++...+....+ +...+...+.++++.+.|++++++.+. ++.
T Consensus 239 ~~~~~~----------------~------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~ 295 (360)
T PRK07392 239 QQWRDP----------------W------PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSA 295 (360)
T ss_pred HhhCCC----------------C------CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCC
Confidence 111000 0 0123444444444433233 333455667788889999888888765 344
Q ss_pred eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH-HhcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHH
Q 010125 421 FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI-NASGKAYMTHAVLG--GIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 421 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di 497 (517)
.+.+.++.... ..++.+++ .+.|+....+..+. +..++|++++. .++.
T Consensus 296 ~~fl~~~~~~~-------------------------~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~----~~~~ 346 (360)
T PRK07392 296 ANFLLVQSQGS-------------------------ALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRT----EAEN 346 (360)
T ss_pred CCEEEEEcCCC-------------------------HHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCC----HHHH
Confidence 44444333211 24455554 45677665555443 34699999863 3345
Q ss_pred HHHHHHHHHH
Q 010125 498 VVAWTVVQQH 507 (517)
Q Consensus 498 ~~l~~~l~~~ 507 (517)
+++.++|+++
T Consensus 347 ~~l~~al~~~ 356 (360)
T PRK07392 347 QRLLEALAAI 356 (360)
T ss_pred HHHHHHHHHH
Confidence 5666665554
No 246
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.72 E-value=9.1e-15 Score=151.43 Aligned_cols=294 Identities=14% Similarity=0.097 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG 213 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G 213 (517)
...++.+.|+++.+.+ ..+++++||+||..|+..+|.......|....++.+|.+....|-+..-+..+.+
T Consensus 83 ~~~~l~~~l~~~~~~~---------~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~ 153 (396)
T PRK04073 83 QLGPWYEKVAKLTGKD---------MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSS 153 (396)
T ss_pred HHHHHHHHHHhcCCCC---------eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcC
Confidence 3344556666666542 4689999999999999999865222112111123455555566766655555544
Q ss_pred CCC---------CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhC
Q 010125 214 IDV---------KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFG 280 (517)
Q Consensus 214 ~g~---------~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~g 280 (517)
-.. ..+..+|. -|+++|++++++.+ .+|+++...+++|.+-| +++|.++|++||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~------~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g 220 (396)
T PRK04073 154 EEEYKRGFGPMLPGIKKIPY-------GDLEALKAAITPNT------AAFLVEPIQGEAGINIPPEGFLKAARELCKEEN 220 (396)
T ss_pred CcccccCCCCCCCCceEeCC-------CCHHHHHHhcccCe------EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 210 01233332 17889998886443 47888888899998855 899999999999
Q ss_pred CeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 281 IWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 281 i~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
+++++|++|.++......+.....++ ..|.+++ .|.++.+ +..|+++.+++ +.+.+... ...
T Consensus 221 ~lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~~~--i~~~~~~~----~~~-------- 283 (396)
T PRK04073 221 VLFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISCVAANRD--ILGVFTPG----SHG-------- 283 (396)
T ss_pred CEEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceEEEEcHH--HHhhhcCC----CCC--------
Confidence 99999999987532111111001122 4677765 6998876 67888877532 22222110 000
Q ss_pred cCCCccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC--CeEEecCCCeeEEEEEecCCCcc
Q 010125 360 DYKDWQITLSRRFRSLKLW---FVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK--RFEIVFPCHFAVVCFRVSPSPVL 434 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~--~~~l~~~~~~~~v~f~~~~~~~~ 434 (517)
.++ ++ ..+... ++|+.+-.+ ...++..+++++|.+.|+++. .+..+ ++...++.+.+...
T Consensus 284 ----~t~-~~---~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~i~~~-~~~g~~~~~~~~~~--- 348 (396)
T PRK04073 284 ----STF-GG---NPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPMIKEV-RGRGLFIGVELNEP--- 348 (396)
T ss_pred ----CCC-CC---CHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCcccce-ecceEEEEEEecch---
Confidence 011 11 223333 334333222 345666778999999998752 22211 23344455544321
Q ss_pred hhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 435 MDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
...+.++|.++|.++ .+ .+..++|++. +...+++|+++++++|+++.
T Consensus 349 ----------------------~~~~~~~l~~~Gv~~-~~---~~~~~iRi~p-~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 349 ----------------------ARPYCEALKEEGLLC-KE---THETVIRFAP-PLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred ----------------------HHHHHHHHHHCCeEE-ec---CCCCEEEEEC-CcccCHHHHHHHHHHHHHHh
Confidence 245667777788654 32 2335899997 45668889999999998753
No 247
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.72 E-value=5e-15 Score=153.42 Aligned_cols=326 Identities=12% Similarity=0.061 Sum_probs=200.0
Q ss_pred HHHHHHHHhcccc-cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCce--EEcCCchHHHHHHHHHHHHHHHHH
Q 010125 108 GFLGEMLSSGFNI-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGG--VIQGTTCEAILCTLTAARDRVLNK 184 (517)
Q Consensus 108 ~~~~~~l~~~~n~-~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g--~~t~ggt~a~~~al~~ar~~~~~~ 184 (517)
..+.+.+...... ....|....+..++.+.+++|+.+..+..-+ .... ++|+|+++|+..++.+....
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~-----~~~i~v~iT~Ga~~al~~~~~~l~~~---- 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALA-----AGRVATVQTPGGTGALRVGADFLKRA---- 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccc-----cCeEEEEecCCccHHHHHHHHHHHHh----
Confidence 5667776666543 3346777788899999999998765432101 1134 89999999988776443210
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 185 IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
.+++.|++.++++..+..+++.+|+ +++.+|+...+++.+|+++|+++++.... +..+++.+.++||||
T Consensus 118 -----~pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~~---~~~~~i~~~p~NPTG 186 (396)
T PRK09257 118 -----FPDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAMLADLSQAPA---GDVVLLHGCCHNPTG 186 (396)
T ss_pred -----CCCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHHHHHHHhCCC---CCEEEEeCCCCCCCC
Confidence 0667899999999999999999999 99999983223478999999998874211 124677788999999
Q ss_pred ccc---ChhHHHHHHHHhCCeEEcccccccccccCc-ccccc--ccCCCCCCeeeeccccccCC-CCcceEEEE--eCch
Q 010125 265 AVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICP-EFRHF--IDGVEGADSFSLNAHKWFFA-TLDCCCLWV--KDPR 335 (517)
Q Consensus 265 ~id---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~-~~~~~--~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~--~~~~ 335 (517)
.+- .+++|+++|++||+|+++|.+|........ ..... +.+...--.+..++.|.++. .+.+|++++ .++.
T Consensus 187 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~~~ 266 (396)
T PRK09257 187 ADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAEDAE 266 (396)
T ss_pred CCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCCHH
Confidence 884 478889999999999999999977542111 11111 11111112456779999986 789999874 3333
Q ss_pred hHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc--------HHHHHHHHHHHHHHHHHHHHHH
Q 010125 336 ALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG--------VANLRHFLRSHVNMAKLFERLV 407 (517)
Q Consensus 336 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g--------~~g~~~~i~~~~~~a~~l~~~l 407 (517)
.+.+............ ..+. ..+...++.+.+. .+-++++.++..++++.+.+.|
T Consensus 267 ~~~~~~~~~~~~~~~~--------------~~~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr~~l~~~L 329 (396)
T PRK09257 267 EADRVLSQLKATIRTN--------------YSNP---PAHGAAIVATILNDPELRAEWEAELEEMRERIKAMRQLLVEAL 329 (396)
T ss_pred HHHHHHHHHHHHhhhh--------------cCCC---cHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2211111000000000 0000 1111122222221 2334456677778888888888
Q ss_pred hcCC---CeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEE
Q 010125 408 SGDK---RFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIR 484 (517)
Q Consensus 408 ~~~~---~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR 484 (517)
++.. ++.+. .|+.++++|--.+ + ..+.+.+.+.|+. +.+ .+ |
T Consensus 330 ~~~~~~~~~~~~-~p~gg~~~w~~l~-----------------------~---~~~~~l~~~~~V~-~~p---~~----r 374 (396)
T PRK09257 330 KAKGPSRDFDFI-ARQRGMFSYSGLT-----------------------P---EQVDRLREEFGVY-AVG---SG----R 374 (396)
T ss_pred HhcCCCCCcccc-cccceEEEecCCC-----------------------H---HHHHHHHHcCCEE-EcC---CC----e
Confidence 8762 25443 4655655442211 1 1222333455654 333 12 9
Q ss_pred EEecCCCCcHHHHHHHHHHHHHH
Q 010125 485 FATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 485 ~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
+++++ .++++|++++++|+++
T Consensus 375 i~~~~--~~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 375 INVAG--LNESNIDYVAEAIAAV 395 (396)
T ss_pred EEEee--CCHHHHHHHHHHHHhh
Confidence 99853 5777999999998764
No 248
>PRK06460 hypothetical protein; Provisional
Probab=99.71 E-value=2.9e-15 Score=153.48 Aligned_cols=234 Identities=16% Similarity=0.121 Sum_probs=151.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC----
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT---- 201 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~---- 201 (517)
...|...++|+. ++++.|.+. .+++++|++|+..++.+... +++.|+++...
T Consensus 42 ~~~p~~~~L~~~----lA~l~g~~~---------~v~~~sG~~ai~~~l~al~~-----------~Gd~Vl~~~~~~~~t 97 (376)
T PRK06460 42 EANPTVLELTKK----IVELENAEM---------GVAFSSGMGAISTTALALLK-----------PGNSVLVHRDMFGRS 97 (376)
T ss_pred CCCccHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcCcH
Confidence 345566666654 666677643 35567778877766654422 45556666543
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC
Q 010125 202 HCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI 281 (517)
Q Consensus 202 H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi 281 (517)
+..+...++..|+ +++.++.+. .+.+++.++++ +.+|+++.++|++|.+-|+++|+++|++||+
T Consensus 98 y~~~~~~~~~~G~---~v~~~~~~~-------~~~l~~~~~~~------tklV~l~sp~NPtG~v~d~~~I~~la~~~g~ 161 (376)
T PRK06460 98 YRFFTDYLKNWGV---NVDASNPGS-------DNIIEKAKSKR------YDVVFVENITNPLLRVVDITELSKVCKENGS 161 (376)
T ss_pred HHHHHHHHHhhCc---EEEEECCCC-------HHHHHHhcCCC------ceEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 3345567788898 888887642 23344443332 3488889999999999999999999999999
Q ss_pred eEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC--cceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 282 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL--DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
+++||++|+.+... ... ..++|.++.++||+++.+. ..|+++ .+++.. +.+.......
T Consensus 162 ~vivDea~~~~~~~----~~l---~~~~divv~S~sK~l~G~~~~~~G~~~-~~~~l~-~~l~~~~~~~----------- 221 (376)
T PRK06460 162 ILIVDATFSTPINQ----KPL---ELGADIVVHSASKFLAGHNDVIAGLAA-GYGKLL-NVIDQMRRTL----------- 221 (376)
T ss_pred EEEEECCcCccccC----Chh---hcCCCEEEeecceeccCCCCceEEEEe-cCHHHH-HHHHHHHHhc-----------
Confidence 99999999764311 111 1258999999999987442 256554 444332 2221100000
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------Cee
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----------------HFA 422 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----------------~~~ 422 (517)
+-...+...|.+++ |.+.++.++++..++++++.+.|++.|.++-+.-| ..+
T Consensus 222 ---------g~~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg 290 (376)
T PRK06460 222 ---------GTSLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGG 290 (376)
T ss_pred ---------CCCCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence 01112345566655 56888999999999999999999998887533211 256
Q ss_pred EEEEEecC
Q 010125 423 VVCFRVSP 430 (517)
Q Consensus 423 ~v~f~~~~ 430 (517)
+++|.+.+
T Consensus 291 ~~s~~~~~ 298 (376)
T PRK06460 291 VLSFEVNG 298 (376)
T ss_pred EEEEEEcC
Confidence 78888754
No 249
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.71 E-value=7e-15 Score=154.52 Aligned_cols=366 Identities=13% Similarity=0.097 Sum_probs=206.2
Q ss_pred HHHHHHHHHhcccccccccccCh-hhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHH-HHHHHH
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSP-AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAAR-DRVLNK 184 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp-~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar-~~~~~~ 184 (517)
+..+-++.....+. .|.... .....|+.+.+|+.+.++..... .+....++|+|+++|+..++.+.. +.++.
T Consensus 109 ~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~--~~~~~V~it~Gat~al~~~~~~l~~~~ll~- 182 (521)
T TIGR03801 109 DAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPP--PGEFDLFAVEGGTAAMCYIFDSLKANELLK- 182 (521)
T ss_pred CHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCC--CCcCeEEEeCCHHHHHHHHHHHHhHhhcCC-
Confidence 44555555444433 354333 34556666667877765432110 000168999999999887766532 11111
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCC-----cccCHHHHHHHHHHhHhcCCcceEEEeecc
Q 010125 185 IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSS-----YGLSPDSLMAQINSDVEVGLIPLFLCATIG 259 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~-----~~~d~~~Le~~i~~~~~~g~~p~~vv~t~g 259 (517)
+++.|++..+++..+...+++.|.|. +++.|++++.++ |++|+++|++++++.++ +|+++.+
T Consensus 183 ------pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~k------ai~l~nP 249 (521)
T TIGR03801 183 ------KGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIK------ALFVVNP 249 (521)
T ss_pred ------CCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhcCCCCc------EEEEeCC
Confidence 66778888899999999988885432 677777764323 88999999988765443 7777899
Q ss_pred CCccccccC---hhHHHHHHHHh--CCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeC
Q 010125 260 TTAITAVDP---LKPLCDVAKQF--GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKD 333 (517)
Q Consensus 260 tt~~G~idp---l~eI~~i~~~~--gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~ 333 (517)
+||||.+-+ +++|+++|++| ++|+++|.+|+.+.. .+.+.......--.+..++.|.++ ..+..|+++..+
T Consensus 250 ~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~~ 326 (521)
T TIGR03801 250 SNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALHK 326 (521)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhCCCCEEEEEcchhhccCchhhhhhhhcCc
Confidence 999999865 78888899987 999999999986542 222222212122255667999996 558899988765
Q ss_pred chhHHhh-----------hcCCccccCCccccccccccCCC------------ccccCCCCCCch--HHHHHHHHh--cH
Q 010125 334 PRALVSS-----------LSTNPEYLKNKATESMQVVDYKD------------WQITLSRRFRSL--KLWFVIRNY--GV 386 (517)
Q Consensus 334 ~~~~~~~-----------~~~~~~yl~~~~~~~~~~~~~~~------------~~~~~sr~~~al--~~~~~l~~~--g~ 386 (517)
...+.+. +...-..+.... ....+-+ .+...+.. ... ++.++...+ +.
T Consensus 327 ~~v~d~li~~lp~~~~~~l~~ry~~~~~~p----~~~~fidr~vadsr~v~~~~~~g~s~p-~Q~q~al~a~~all~~~~ 401 (521)
T TIGR03801 327 DNIFDKLIAELPEEKKKELDKRYSSLTTEP----RKLKFIDRLVADSRQVALNHTAGLSTP-QQVQMALFSLFALMDKEN 401 (521)
T ss_pred hHHHHHHHHhccHHHHHHHhhhhccccCCh----hhhhhHHHHHHHHHHHHHhccCCCCcH-HHHHHHHHHHHHHhccch
Confidence 4221111 110000110000 0000000 01111111 001 111122222 33
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCCCeeEEEEEecCCCcchhhhhhhhhccccch-HHHH--HHHHHHHHH
Q 010125 387 ANLRHFLRSHVNMAKLFERLVSGDKRFEIV-FPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSE-EEQI--NEFNRELLE 462 (517)
Q Consensus 387 ~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~-~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~l~~ 462 (517)
+..+++.+.+.++.+.+.+.| ++.+. .+|....++|.-.+.-.. .. .+.+ ...+ +....++..
T Consensus 402 ~y~~~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~--~~-------~~~~f~~~l~~~~~~~~~~~ 468 (521)
T TIGR03801 402 AYKAETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAE--KN-------YGEEFSSYLKKNYSPVDVLF 468 (521)
T ss_pred hHHHHHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHH--Hh-------cchHHHHHHhccCCHHHHHH
Confidence 445566667777777777777 33322 356666665543321000 00 0000 0000 001234555
Q ss_pred HHH-hcCcEEEeeeeECC-EeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Q 010125 463 SIN-ASGKAYMTHAVLGG-IYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQSA 514 (517)
Q Consensus 463 ~l~-~~g~~~~~~~~~~g-~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~~ 514 (517)
+|. +.|++.+++..+.. ..++|+|+.+ .+++++.++.+.|+++.++...+
T Consensus 469 ~L~~e~gV~v~PG~~Fg~~~~~vRisla~--l~~~~~~~~~~rl~~~~~~~~~~ 520 (521)
T TIGR03801 469 RLAEETGIVLLPGGGFGGPEWSVRVSLAN--LNEYDYAEIGRAIRKILDEYYEA 520 (521)
T ss_pred HHHHhCCEEEeCchhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 554 55777777766643 4579999964 46779999999999998776655
No 250
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.71 E-value=1.5e-14 Score=147.77 Aligned_cols=308 Identities=13% Similarity=0.061 Sum_probs=187.1
Q ss_pred HHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCC-cccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh
Q 010125 107 AGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLP-KSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI 185 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~-~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~ 185 (517)
+..+.+.+..... ...|....+..++.+++.+|+.+.+|.+ -. ....++|+|+++++..++.+..-.
T Consensus 36 ~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~~I~it~G~~~~i~~~~~~l~~~----- 103 (357)
T TIGR03539 36 PPLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLD-----PTAVLPVIGTKELVAWLPTLLGLG----- 103 (357)
T ss_pred CHHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCC-----cCeEEEccChHHHHHHHHHHHcCC-----
Confidence 3445555544332 2356656677899999999999987764 22 137899999999876554432111
Q ss_pred cccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 186 GRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 186 g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++.+++|.++..+++.+|+ +++.++ +++.++. . .+.+|+++.++|+||.
T Consensus 104 -----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~ 157 (357)
T TIGR03539 104 -----PGDTVVIPELAYPTYEVGALLAGA---TPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGR 157 (357)
T ss_pred -----CCCEEEECCCCcHHHHHHHHhcCC---EEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCc
Confidence 566788999999999999999998 776663 1222221 1 2347778889999998
Q ss_pred ccC---hhHHHHHHHHhCCeEEcccccccccccCcccccccc-----CCCCCCeeeeccccccC-CCCcceEEEEeCchh
Q 010125 266 VDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFID-----GVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRA 336 (517)
Q Consensus 266 idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~-----g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~ 336 (517)
+-+ +++|+++|++||+|+++|.+|+.+... +.....+. +...-..+..+++|.++ ....+|+++. +++.
T Consensus 158 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~ 235 (357)
T TIGR03539 158 VLSVDELRAIVAWARERGAVVASDECYLELGWE-GRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPAL 235 (357)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEecchhhhccC-CCCccceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHH
Confidence 754 778999999999999999999654321 11111111 00011256668999985 4455787764 3333
Q ss_pred HHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010125 337 LVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEI 415 (517)
Q Consensus 337 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l 415 (517)
.. .+.....+. +.....+...++...+. ...++...++..++++++.+.|++. ++.+
T Consensus 236 ~~-~~~~~~~~~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~ 293 (357)
T TIGR03539 236 VA-ELLTVRKHA--------------------GLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRI 293 (357)
T ss_pred HH-HHHHHHhhc--------------------ccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCC
Confidence 22 221100000 00012222233333332 2345556666777888898999875 6765
Q ss_pred ecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE--CCEeEEEEEecCCCCc
Q 010125 416 VFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL--GGIYAIRFATGATLTE 493 (517)
Q Consensus 416 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~g~~~lR~~~~~~~t~ 493 (517)
. +|..+++.+...+.. ...+.++|.+.|+...++..+ .+..++|+++.+ +
T Consensus 294 ~-~p~~~~~~~~~~~~~------------------------~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~~---~ 345 (357)
T TIGR03539 294 D-HSEAGLYLWATRGED------------------------AWDTVDRLAELGILVAPGDFYGPAGSQHVRVALTA---T 345 (357)
T ss_pred c-CCCccEEEEEECCCC------------------------HHHHHHHHHhCCEEECCccccCCCCCCeEEEEecC---C
Confidence 4 566666555433320 234666777788755444322 235799999964 4
Q ss_pred HHHHHHHHHHH
Q 010125 494 KRHVVVAWTVV 504 (517)
Q Consensus 494 ~~di~~l~~~l 504 (517)
+++++++++.|
T Consensus 346 ~~~i~~~~~~l 356 (357)
T TIGR03539 346 DERIAAAVARL 356 (357)
T ss_pred HHHHHHHHHhh
Confidence 67898888765
No 251
>PLN02452 phosphoserine transaminase
Probab=99.71 E-value=3.6e-15 Score=151.18 Aligned_cols=340 Identities=10% Similarity=0.021 Sum_probs=214.2
Q ss_pred ccceeCCCCCChH-HHHHHHHHhcccccc------cccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCch
Q 010125 95 NYFAYFPSSGSIA-GFLGEMLSSGFNIVG------FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC 167 (517)
Q Consensus 95 ~~~~~~~~~~~~~-~~~~~~l~~~~n~~~------~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt 167 (517)
+-+.|.+++...| .++..+....+|-.+ ....-++...++-+++.+.|+++++.|++. .-.++++|||
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y-----~v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNY-----EVLFLQGGAS 81 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEeCccH
Confidence 4567777765554 555555555544221 122246778888899999999999997653 2456678888
Q ss_pred HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH--HHHHHHHcCCCCCCEEEEecCCCC-CcccCHHHHHHHHHHh
Q 010125 168 EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA--LQKAAQIVGIDVKNFRAIKTTKSS-SYGLSPDSLMAQINSD 244 (517)
Q Consensus 168 ~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s--~~kaa~~~G~g~~~v~~vp~d~~~-~~~~d~~~Le~~i~~~ 244 (517)
.+.-+++...... ++.+.++. ..+++ +.+.|+.+|. ..+.......+ ....++++++ .+
T Consensus 82 ~~~ea~~~nl~~~----------~~~~l~~~-~G~fg~r~~~~a~~~g~---~~~~~~~~~~~~~~~~~~~~~~----~~ 143 (365)
T PLN02452 82 TQFAAIPLNLCKP----------GDKADFVV-TGSWSKKAAKEAKKYCK---TNVIASGKDEKYTKIPSVSEWE----LT 143 (365)
T ss_pred HHHHHHHHhcCCC----------CCeEEEEE-CCHHHHHHHHHHHHhCC---CcEEEecCCCCCCCCCChHHcC----CC
Confidence 7776655544221 23344444 45554 4556666675 33333221111 1134666542 11
Q ss_pred HhcCCcceEEEeeccCCcccc-ccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC
Q 010125 245 VEVGLIPLFLCATIGTTAITA-VDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT 323 (517)
Q Consensus 245 ~~~g~~p~~vv~t~gtt~~G~-idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p 323 (517)
. .+..|.+++..|.+|. +.|++++.+ +.++||++.+.+....+-- ..+.+..+.||.++ |
T Consensus 144 ~----~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv~--------~~~v~~~saqK~lG-P 204 (365)
T PLN02452 144 P----DAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDVS--------KYGVIYAGAQKNVG-P 204 (365)
T ss_pred C----CCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCHH--------HcCEEEEecccccC-C
Confidence 1 2348999999999999 699988863 8999999987777655421 23334479999996 8
Q ss_pred CcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHhcHH-HHHHHHHHHHHHHH
Q 010125 324 LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNYGVA-NLRHFLRSHVNMAK 401 (517)
Q Consensus 324 ~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~g~~-g~~~~i~~~~~~a~ 401 (517)
.|.|++++|++... +.-...+.|+..... . ...+.-.+-. +..+.+..+++.+-.+ |++.+.+++.++++
T Consensus 205 ~Gl~~v~vr~~~l~-~~~~~~~~~~~~~~~-----~--~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~ 276 (365)
T PLN02452 205 SGVTIVIIRKDLIG-NARPITPGMLDYKIH-----A--ENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKAD 276 (365)
T ss_pred CCeEEEEEcHHHHh-hcccCCCchhhHHHH-----H--hcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 99999999876542 221222333321100 0 0000001111 1224566677777665 89999999999999
Q ss_pred HHHHHHhcCCCeEEe-cC---CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE
Q 010125 402 LFERLVSGDKRFEIV-FP---CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL 477 (517)
Q Consensus 402 ~l~~~l~~~~~~~l~-~~---~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 477 (517)
++++.|++.++|... .+ ....+|+|++... .+..++.+.+.++|.+.+.+...
T Consensus 277 ~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~-----------------------~~~~~f~~~~~~~g~~~~~G~r~ 333 (365)
T PLN02452 277 LLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS-----------------------ELEAEFVKEAAKAGMVQLKGHRS 333 (365)
T ss_pred HHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc-----------------------hhHHHHHHHHHHCCCcccCCccc
Confidence 999999998887221 11 1234788987543 25678889999999876655443
Q ss_pred CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 478 GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 478 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
-|. +|+++.| ..+.+++++|++.+++..++
T Consensus 334 ~gg--~R~s~yn-a~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 334 VGG--MRASIYN-AMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred cCc--eEEECcC-CCCHHHHHHHHHHHHHHHHh
Confidence 333 9999865 77888999999999887653
No 252
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.71 E-value=2.2e-15 Score=140.40 Aligned_cols=298 Identities=11% Similarity=0.091 Sum_probs=200.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH
Q 010125 130 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA 209 (517)
Q Consensus 130 ~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa 209 (517)
+...+.+.+...++++-|-+ +.++.+++-.||..++.+... |++.|+-.+..|.|+....
T Consensus 109 Gtq~iHk~LE~kiAqfh~rE---------D~ilypscfdANag~feail~-----------pedAvfSDeLNhASIIdGi 168 (417)
T KOG1359|consen 109 GTQDIHKLLESKIAQFHGRE---------DTILYPSCFDANAGAFEAILT-----------PEDAVFSDELNHASIIDGI 168 (417)
T ss_pred cchHHHHHHHHHHHHHhCCC---------ceEEeccccccchHHHHHhcC-----------hhhhhhccccccchhhhhh
Confidence 35667777778888877655 357888888888766655533 6677888888999998887
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccc
Q 010125 210 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
+++.- -+.+|+..|+..+.+..+.. -.+|+.....+..|.+.|+++|+++++|||..+.+|.||
T Consensus 169 rLckr--------------y~h~dv~~l~~~l~~a~k~r--~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecH 232 (417)
T KOG1359|consen 169 RLCKR--------------YRHVDVFDLEHCLISACKMR--LKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECH 232 (417)
T ss_pred HHHhh--------------hccchhHHHHHHHHHhhhhe--EEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecc
Confidence 76652 23678889998887654422 234444455788999999999999999999999999999
Q ss_pred ccccccCcccc---ccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhh-cCCccccCCccccccccccCCCcc
Q 010125 290 AGSACICPEFR---HFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSL-STNPEYLKNKATESMQVVDYKDWQ 365 (517)
Q Consensus 290 g~~~~~~~~~~---~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~ 365 (517)
+.+++-. ..+ ..+.-..++|.+.....|.++.. .|...+. +..+.+.+ +...+|++...
T Consensus 233 aTgf~G~-tGrGt~E~~~vm~~vdiinsTLgKAlGga--~GGyttg-p~~li~llrqr~RpylFSns------------- 295 (417)
T KOG1359|consen 233 ATGFFGE-TGRGTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTG-PKPLISLLRQRSRPYLFSNS------------- 295 (417)
T ss_pred cceeecC-CCCChHHHhCCCCcceehhhhhhhhhcCC--CCCCccC-ChhHHHHHHhcCCceeecCC-------------
Confidence 8887532 222 22334568999999999999742 2222222 32333333 34557887542
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhcc
Q 010125 366 ITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNC 445 (517)
Q Consensus 366 ~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~ 445 (517)
+..+--..+.+++..+.. -.+.+.+...+.+++++.++.. ||.+.... .++....+ +.
T Consensus 296 lppavV~~a~ka~dllm~-----s~~~i~~~~a~~qrfr~~me~a-GftIsg~~-hPI~pv~l-Gd-------------- 353 (417)
T KOG1359|consen 296 LPPAVVGMAAKAYDLLMV-----SSKEIQSRQANTQRFREFMEAA-GFTISGAS-HPICPVML-GD-------------- 353 (417)
T ss_pred CChhhhhhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhc-CceecCCC-CCccceec-cc--------------
Confidence 111111233444444432 1356677778899999998765 99987532 23333333 22
Q ss_pred ccchHHHHHHHHHHHHHHHHhcCcEEE---eeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 446 LLSEEEQINEFNRELLESINASGKAYM---THAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 446 ~~~~~~~~~~~~~~l~~~l~~~g~~~~---~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.++..+..+.|..+|+..+ .|++..|+..+|+.++..+ +++|||++++++.++++.+
T Consensus 354 --------a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaH-t~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 354 --------ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAH-TEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred --------HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhc-CHHHHHHHHHHHHHHHHhh
Confidence 2456677788888998543 3445578889999986544 5669999999999998754
No 253
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.70 E-value=1.5e-15 Score=153.96 Aligned_cols=340 Identities=13% Similarity=0.046 Sum_probs=209.5
Q ss_pred ChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHH
Q 010125 105 SIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 184 (517)
Q Consensus 105 ~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~ 184 (517)
.+|.+..+.+.+.. .....-+|...++-+++.+.|.++++.+.+. .-.++++|||.++-.++......
T Consensus 14 ~~~~~~~~~~~~~~---~~~~HRs~~F~~i~~e~~~~L~~l~~~~~~~-----~v~~l~GsGT~a~Eaa~~nl~~~---- 81 (374)
T TIGR01365 14 KRPGWSIEELKNAP---LGRSHRSKLGKEKLAEAIKKTREMLGVPADY-----LIGIVPASDTGAVEMALWSMLGC---- 81 (374)
T ss_pred CCchhhHHHHhhhh---cccCcCCHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCchHHHHHHHHHHcCCC----
Confidence 44555455554432 2222457889999999999999999986442 13577999998887666654311
Q ss_pred hcccCCCCeEEEeCCCCchH--HH-HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCC
Q 010125 185 IGRENISKLIVYGSDQTHCA--LQ-KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTT 261 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s--~~-kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt 261 (517)
++..+++. ..++ +. +.|+..|++ ++..+..... -.+|+++++. . + -|++++..|
T Consensus 82 ------~g~~vLv~--g~FG~r~~~eia~~~g~~--~v~~l~~~~g--~~~~~~~ve~----~-~------~v~~vhnET 138 (374)
T TIGR01365 82 ------RGVDVLAW--ESFGKGWVTDVTKQLKLP--DVRVLEAEYG--KLPDLKKVDF----K-N------DVVFTWNGT 138 (374)
T ss_pred ------CCCeEEEE--CHHHHHHHHHHHHhcCCC--CcEEEcCCCC--CCCCHHHcCC----C-C------CEEEecCCC
Confidence 33333333 2443 23 788889982 2677766543 3789999872 1 1 267999999
Q ss_pred ccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhh
Q 010125 262 AITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSL 341 (517)
Q Consensus 262 ~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~ 341 (517)
.||...|+++|+..+ ++..++||+.-+.+....+ ++++|.+..+.+|.|+.|.|.|+++++++...+ .-
T Consensus 139 STGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~--------~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~-~~ 207 (374)
T TIGR01365 139 TSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLD--------YHKLDVVTFSWQKVLGGEGAHGMLILSPRAVAR-LE 207 (374)
T ss_pred chheecccccccccc--CCCcEEEEccchhcCCCCC--------hhHCcEEEEechhccCCCCceEEEEECHHHHHH-Hh
Confidence 999999998766433 5899999997655554432 125999999999999999999999998876532 11
Q ss_pred cCCc-----cccCCccccccccccCCCccccCCCCCCc--hHHHHH---HHHhcHH-HHHHHHHHHHHHHHHHHHHHhcC
Q 010125 342 STNP-----EYLKNKATESMQVVDYKDWQITLSRRFRS--LKLWFV---IRNYGVA-NLRHFLRSHVNMAKLFERLVSGD 410 (517)
Q Consensus 342 ~~~~-----~yl~~~~~~~~~~~~~~~~~~~~sr~~~a--l~~~~~---l~~~g~~-g~~~~i~~~~~~a~~l~~~l~~~ 410 (517)
.... .|+..... . .+.........++.+ ..+++. ++.+-.+ |++++.+++.++++.+++.+++.
T Consensus 208 ~~~~y~~~~~~~~~~~~---~--~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~l 282 (374)
T TIGR01365 208 SYTPAWPLPKIFRLTKG---G--KLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKN 282 (374)
T ss_pred hcCCCCCChhhhccccc---c--chhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHC
Confidence 1111 12211000 0 000000001111111 233433 3333454 89999999999999999999998
Q ss_pred CCeEEecC----CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeee-eECCEeEEEE
Q 010125 411 KRFEIVFP----CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHA-VLGGIYAIRF 485 (517)
Q Consensus 411 ~~~~l~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~ 485 (517)
+.++++.. ....++++.+.+.+.. ..++.....+..++++.|.++|..+-++. ...| ..+||
T Consensus 283 g~l~~~~~~~~~rS~tvt~v~~~~~~~~------------~~~~~~~~~~~~~~~~~l~~~gi~i~~G~~~~~~-~~fRI 349 (374)
T TIGR01365 283 NWIHFLAETPEIRSNTSVCLKVVDPAID------------ALDEDAQADFAKELISTLEKEGVAYDIGSYRDAP-SGLRI 349 (374)
T ss_pred CCcccCCCChhhcCCCeEEEEeCCcccc------------ccccchhhHHHHHHHHHHHHCCEEEeccccccCC-CceEE
Confidence 44777652 1233456766433100 00000011224667888888886443232 2233 67999
Q ss_pred EecCCCCcHHHHHHHHHHHHHHHH
Q 010125 486 ATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 486 ~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
..+. ..+.+|++.+++.|.=+.+
T Consensus 350 g~~G-~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 350 WCGA-TVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred ecCC-cCCHHHHHHHHHHHHHHHh
Confidence 9975 5678899999999876544
No 254
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.70 E-value=1.5e-14 Score=151.68 Aligned_cols=319 Identities=13% Similarity=0.076 Sum_probs=211.6
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC
Q 010125 122 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT 201 (517)
Q Consensus 122 ~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~ 201 (517)
...|....+...+.+.+.+++....|+.... ..+++|+|+++|+...+....+ +++.|++-+++
T Consensus 125 ~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~-----~~IiiT~G~q~al~l~~~~l~~-----------pGd~v~vE~Pt 188 (459)
T COG1167 125 ALQYGPTAGLPELREAIAAYLLARRGISCEP-----EQIVITSGAQQALDLLLRLLLD-----------PGDTVLVEDPT 188 (459)
T ss_pred hhcCCCCCCcHHHHHHHHHHHHHhcCCccCc-----CeEEEeCCHHHHHHHHHHHhCC-----------CCCEEEEcCCC
Confidence 3566666789999999999999888876542 3799999998887755544322 77889999999
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccCh---hHHHHHHHH
Q 010125 202 HCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPL---KPLCDVAKQ 278 (517)
Q Consensus 202 H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl---~eI~~i~~~ 278 (517)
|+....+.+.+|+ +++.||+|.+ -||+++|++.++... .-++.+.....||||..-++ ++|.++|++
T Consensus 189 Y~~~~~~~~~~g~---~~~~vp~d~~---G~~~e~le~~~~~~~----~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~ 258 (459)
T COG1167 189 YPGALQALEALGA---RVIPVPVDED---GIDPEALEEALAQWK----PKAVYVTPTFQNPTGVTMSLERRKALLALAEK 258 (459)
T ss_pred cHHHHHHHHHcCC---cEEecCCCCC---CCCHHHHHHHHhhcC----CcEEEECCCCCCCCCCccCHHHHHHHHHHHHH
Confidence 9999999999999 9999999853 699999999998652 12455555678999998665 689999999
Q ss_pred hCCeEEcccccccccccCccccccccCCC--CCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccc
Q 010125 279 FGIWVHVDAAYAGSACICPEFRHFIDGVE--GADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESM 356 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~~~~~~~~~g~~--~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 356 (517)
||+|++-|..|+-..........+ .++. +--.+..++.|.+.....+|++..... +.+.+........
T Consensus 259 ~~~~IIEDD~y~el~~~~~p~~~l-~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~--~~~~~~~~k~~~~------- 328 (459)
T COG1167 259 YDVLIIEDDYYGELRYDGPPPPPL-KALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE--LIEKLLRLKQAAD------- 328 (459)
T ss_pred cCCeEEeeCcchhhhcCCCCCCCh-HhhCCCCCEEEEeeehhhcccccceeeeeCCHH--HHHHHHHHHHHhc-------
Confidence 999999999997766543222211 1111 223567789999999899999987543 1112211100000
Q ss_pred ccccCCCccccCCCCCCchHHHHHHHHhc--HHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCCCeeEE-EEEecCCC
Q 010125 357 QVVDYKDWQITLSRRFRSLKLWFVIRNYG--VANLRHFLRSHVNMAKLFERLVSGD-KRFEIVFPCHFAVV-CFRVSPSP 432 (517)
Q Consensus 357 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g--~~g~~~~i~~~~~~a~~l~~~l~~~-~~~~l~~~~~~~~v-~f~~~~~~ 432 (517)
..+..+....+...+. .| ...++.+.+.+.+..+.+.+.|.+. ++...+..|..++. +.++.+.
T Consensus 329 ----------~~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~- 396 (459)
T COG1167 329 ----------LGPSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEG- 396 (459)
T ss_pred ----------CCCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcCCC-
Confidence 0000111122222222 23 3344555566667778888888775 32333445555554 4444332
Q ss_pred cchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEe-eeeEC----CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 433 VLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMT-HAVLG----GIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~----g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
....++.++..++|..... +..+. ...++|+++++ .+++++++.+..|.++
T Consensus 397 ----------------------~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~--~~~e~i~~gi~~l~~~ 452 (459)
T COG1167 397 ----------------------IDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS--PSEEEIEEGIKRLAAL 452 (459)
T ss_pred ----------------------CCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC--CCHHHHHHHHHHHHHH
Confidence 1135677777778876655 33331 24589999964 3577999999888888
Q ss_pred HHHHH
Q 010125 508 LEAFQ 512 (517)
Q Consensus 508 ~~~l~ 512 (517)
..+..
T Consensus 453 ~~~~~ 457 (459)
T COG1167 453 LREAA 457 (459)
T ss_pred HHHHh
Confidence 76654
No 255
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.70 E-value=3.3e-15 Score=154.13 Aligned_cols=256 Identities=16% Similarity=0.163 Sum_probs=166.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
.+|....+|+. ++++.|.. .++.++||+.|+.+++.+... +++.|+++...|.+..
T Consensus 59 ~nPtv~~lE~~----la~leg~~---------~av~~~SG~aAi~~al~all~-----------~GD~VI~~~~~Y~~T~ 114 (432)
T PRK06702 59 GNPTLAAFEQK----LAELEGGV---------GAVATASGQAAIMLAVLNICS-----------SGDHLLCSSTVYGGTF 114 (432)
T ss_pred CCcHHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHH
Confidence 46777778766 44555543 468899999999888876532 6678999989887555
Q ss_pred HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KA----AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 ka----a~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
.. +..+|+ +++++.. .+|+++|+++|+++++ +|++..++++++.+-|+++|+++|++||++
T Consensus 115 ~~~~~~l~~~Gi---~v~~vd~------~~d~~~l~~~I~~~Tk------~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~ 179 (432)
T PRK06702 115 NLFGVSLRKLGI---DVTFFNP------NLTADEIVALANDKTK------LVYAESLGNPAMNVLNFKEFSDAAKELEVP 179 (432)
T ss_pred HHHHHHHHHCCC---EEEEECC------CCCHHHHHHhCCcCCe------EEEEEcCCCccccccCHHHHHHHHHHcCCE
Confidence 54 567788 8888842 5799999999988765 677888999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhH-H-----hhhcCCccc-----cCC
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRAL-V-----SSLSTNPEY-----LKN 350 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~-~-----~~~~~~~~y-----l~~ 350 (517)
+++|.+|+...+.-| +. .+||.++-+..||++..- ..|.+.+.....- . ......+.+ +.+
T Consensus 180 livD~T~~tP~~~~p-l~------~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~ 252 (432)
T PRK06702 180 FIVDNTLATPYLCQA-FE------HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQN 252 (432)
T ss_pred EEEECCCCchhhCCh-hh------cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhc
Confidence 999999975543222 11 179999999999997552 2222333111100 0 000000000 000
Q ss_pred ccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------
Q 010125 351 KATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC----------- 419 (517)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~----------- 419 (517)
......-......+....+-...++..|..++ |.+.+..++++..+++..+.+.|++.|.++.+.-|
T Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~ 330 (432)
T PRK06702 253 FGAAAYIVKARVQLLRDYGNCMSPFNAYISNI--GLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLA 330 (432)
T ss_pred cchhhHHHHHHHHHHHHccCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHH
Confidence 00000000000000111222446667777766 55678899999999999999999999987644322
Q ss_pred -------CeeEEEEEecC
Q 010125 420 -------HFAVVCFRVSP 430 (517)
Q Consensus 420 -------~~~~v~f~~~~ 430 (517)
..++++|.+..
T Consensus 331 ~~~~~~g~gg~~sf~l~~ 348 (432)
T PRK06702 331 QKYLKKGASGVLTFGIKG 348 (432)
T ss_pred HHhCcCCCceEEEEEecC
Confidence 13688888863
No 256
>PRK04311 selenocysteine synthase; Provisional
Probab=99.70 E-value=1.3e-14 Score=151.04 Aligned_cols=194 Identities=12% Similarity=0.095 Sum_probs=127.7
Q ss_pred CChHHHHHHHHHhcccccc-cc--cccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHH
Q 010125 104 GSIAGFLGEMLSSGFNIVG-FN--WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDR 180 (517)
Q Consensus 104 ~~~~~~~~~~l~~~~n~~~-~~--~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~ 180 (517)
+..+..+.+.+...+..+. .. +..+.....++ .+.+.+++++|.+ ..+++++|+.|+..++.+. .
T Consensus 96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~-~~e~~lA~l~Gae---------~a~vv~sgtaAl~l~l~~l-~- 163 (464)
T PRK04311 96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDR-ALAALLCALTGAE---------DALVVNNNAAAVLLALNAL-A- 163 (464)
T ss_pred CCCCHHHHHHHHHHHhcccccccchhhcccchHHH-HHHHHHHHHhCCC---------eEEEECCHHHHHHHHHHHh-C-
Confidence 4445555555555443221 11 22222333333 5677888998875 3578888888887766432 1
Q ss_pred HHHHhcccCCCCeEEEeCCCCchH------HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEE
Q 010125 181 VLNKIGRENISKLIVYGSDQTHCA------LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFL 254 (517)
Q Consensus 181 ~~~~~g~~~~~~~~v~~s~~~H~s------~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~v 254 (517)
++..|++|+..|+. +...++..|+ +++.|+++. ..++++++++|+++++ +|
T Consensus 164 ----------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~---~l~~v~~~~----~t~~~dle~aI~~~Tk------lV 220 (464)
T PRK04311 164 ----------AGKEVIVSRGELVEIGGAFRIPDVMRQAGA---RLVEVGTTN----RTHLRDYEQAINENTA------LL 220 (464)
T ss_pred ----------CCCEEEEcchhhhhcCcchhhHHHHHHCCc---EEEEECCCC----CCCHHHHHHhcCccCe------EE
Confidence 45668888776663 3345677788 899887642 5689999999987664 67
Q ss_pred EeeccCCc--cc--cccChhHHHHHHHHhCCeEEcccccccccccCccc----cccccC--CCCCCeeeeccccccCCCC
Q 010125 255 CATIGTTA--IT--AVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEF----RHFIDG--VEGADSFSLNAHKWFFATL 324 (517)
Q Consensus 255 v~t~gtt~--~G--~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~----~~~~~g--~~~aDsi~~~~hK~l~~p~ 324 (517)
+.++.+++ +| ..-|+++|+++||+||++++||++.|... ....+ ...+.. -.++|.+++++|||+++|
T Consensus 221 ~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~-~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp- 298 (464)
T PRK04311 221 LKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLV-DLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP- 298 (464)
T ss_pred EEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccc-cchhccCCCCCchhhHHhcCCcEEEecCcccccCC-
Confidence 77777765 44 56799999999999999999999653321 11000 001110 137999999999999988
Q ss_pred cceEEEEeCc
Q 010125 325 DCCCLWVKDP 334 (517)
Q Consensus 325 ~~g~l~~~~~ 334 (517)
.+|++++++.
T Consensus 299 ~~G~i~g~~~ 308 (464)
T PRK04311 299 QAGIIVGKKE 308 (464)
T ss_pred ceEEEEEcHH
Confidence 4888888644
No 257
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.70 E-value=5.1e-15 Score=151.19 Aligned_cols=232 Identities=13% Similarity=0.148 Sum_probs=160.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|....+|+ .++.+-|.+ ..+++++|++|+..++.+..+ +++.|++++..|.+..
T Consensus 62 gnPt~~~Le~----~la~le~~~---------~~v~~sSG~aAi~~~l~all~-----------~GD~Vlv~~~~Y~~~~ 117 (395)
T PRK05967 62 GTPTTDALCK----AIDALEGSA---------GTILVPSGLAAVTVPFLGFLS-----------PGDHALIVDSVYYPTR 117 (395)
T ss_pred CChHHHHHHH----HHHHHhCCC---------CEEEECcHHHHHHHHHHHhcC-----------CCCEEEEccCCcHHHH
Confidence 3455555554 455554432 457777788888777755432 6678999989998766
Q ss_pred H----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 K----AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 k----aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
. .++..|+ ++..++.+ +.+.++++++++++ +|+++.++|+++.+.||++|+++|+++|++
T Consensus 118 ~l~~~~l~~~Gi---~v~~vd~~-------~~e~l~~al~~~Tk------lV~lesPsNP~l~v~dl~~I~~la~~~g~~ 181 (395)
T PRK05967 118 HFCDTMLKRLGV---EVEYYDPE-------IGAGIAKLMRPNTK------VVHTEAPGSNTFEMQDIPAIAEAAHRHGAI 181 (395)
T ss_pred HHHHHHHHhcCe---EEEEeCCC-------CHHHHHHhcCcCce------EEEEECCCCCCCcHHHHHHHHHHHHHhCCE
Confidence 4 4567788 88888542 35778888876654 899999999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCC--CcceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT--LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
++||++|+.+...-| .. -++|.+..+..|+++.- .-.|++ +.++....+ +. .+..
T Consensus 182 vvVD~t~a~p~~~~p-l~------~GaDivv~S~tKy~~Gh~d~~~G~v-~~~~~~~~~-l~---~~~~----------- 238 (395)
T PRK05967 182 VMMDNTWATPLYFRP-LD------FGVDISIHAATKYPSGHSDILLGTV-SANEKCWPQ-LL---EAHG----------- 238 (395)
T ss_pred EEEECCccCceecCh-hH------cCCCEEEEecccccCCCCCeeEEEE-EcCHHHHHH-HH---HHHH-----------
Confidence 999999977643322 11 17999999999997532 114544 334332211 10 0000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EecC-----C-----------CeeE
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFE-IVFP-----C-----------HFAV 423 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-l~~~-----~-----------~~~~ 423 (517)
..+-...+...|..++ |.+-+.-+++++.++|..+++.|++.|.++ |..| | ..++
T Consensus 239 ------~~G~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~ 310 (395)
T PRK05967 239 ------TLGLCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGI 310 (395)
T ss_pred ------HcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceE
Confidence 0112235556676665 778889999999999999999999999874 3322 1 1468
Q ss_pred EEEEec
Q 010125 424 VCFRVS 429 (517)
Q Consensus 424 v~f~~~ 429 (517)
++|.+.
T Consensus 311 ~sf~l~ 316 (395)
T PRK05967 311 FSFVLA 316 (395)
T ss_pred EEEEEc
Confidence 899886
No 258
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.69 E-value=2.9e-14 Score=145.11 Aligned_cols=349 Identities=13% Similarity=0.108 Sum_probs=204.3
Q ss_pred ccceeCCCCCChHHHHHH-HHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHH
Q 010125 95 NYFAYFPSSGSIAGFLGE-MLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCT 173 (517)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~-~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~a 173 (517)
-|.+....+.+ +++-.. |...... ...|..+|...++|+.+. +++|++ .++.|++||+|...+
T Consensus 39 v~iDLltDsgT-~aMs~~q~a~~~~G--De~yag~~s~~~lE~~va----~~~G~~---------~av~v~sGT~Al~ll 102 (450)
T TIGR02618 39 VYIDLLTDSGT-NAMSDKQWAGLMMG--DEAYAGSRNFYHLERTVR----ELYGFK---------YVVPTHQGRGAENLL 102 (450)
T ss_pred eEEEcccCCCc-HHHHHHHHHHhhhc--chhhcCCCcHHHHHHHHH----HHHCCC---------eEEEcCCHHHHHHHH
Confidence 57777765555 333333 3333222 246899999999997755 456665 479999999996543
Q ss_pred HHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHH-HHHcCCCCCCEEEEecCC--------CCCcccCHHHHHHHHHHh
Q 010125 174 LTAARDRVLNKIGRENISKLIVYGSDQTHCALQKA-AQIVGIDVKNFRAIKTTK--------SSSYGLSPDSLMAQINSD 244 (517)
Q Consensus 174 l~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ka-a~~~G~g~~~v~~vp~d~--------~~~~~~d~~~Le~~i~~~ 244 (517)
. .+ +.+ ++++| +...|++-.++ +...|. .++-++.++ ..+|.||+++|+++|++.
T Consensus 103 ~-~l--------~l~--pGDeV--psn~~f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~ 166 (450)
T TIGR02618 103 S-QI--------AIK--PGDYV--PGNMYFTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEV 166 (450)
T ss_pred H-Hh--------CCC--CcCEE--CCceeHHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhccc
Confidence 2 11 111 45555 55888777776 677787 666665441 235899999999999854
Q ss_pred HhcCCcceEEEeeccCCcc-ccc---cChhHHHHHHHHhCCeEEcccccccc-cccCcc----ccc--c---cc-CCCCC
Q 010125 245 VEVGLIPLFLCATIGTTAI-TAV---DPLKPLCDVAKQFGIWVHVDAAYAGS-ACICPE----FRH--F---ID-GVEGA 309 (517)
Q Consensus 245 ~~~g~~p~~vv~t~gtt~~-G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~-~~~~~~----~~~--~---~~-g~~~a 309 (517)
.. ...| +|+++..++.. |.. +++++|.++|++||+++|.|||+... +++..+ +.. . .. -...+
T Consensus 167 ~~-~~~~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~a 244 (450)
T TIGR02618 167 GA-DKIP-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYA 244 (450)
T ss_pred cC-cccC-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccC
Confidence 21 1233 45555555544 666 67899999999999999999999763 333211 111 0 01 13579
Q ss_pred CeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHH
Q 010125 310 DSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANL 389 (517)
Q Consensus 310 Dsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~ 389 (517)
|++++++||..++|. .|++.+++++...+.-.....| .+. ..++.-.+|.. .++..+++..-.
T Consensus 245 D~~~~S~~Kd~~~~~-GG~l~~~d~~l~~k~r~~~~~~--eG~---------~tyGgla~r~~--~ala~gL~e~~~--- 307 (450)
T TIGR02618 245 DGCTMSGKKDCLVNI-GGFLCMNDDEMFQSAKELVVVF--EGM---------PSYGGLAGRDM--EAMAIGIREAVD--- 307 (450)
T ss_pred cEEEEeeccCCCCCC-ceEEEeCCHHHHHHHHHHhhhc--CCc---------cccCchhhhhH--HHHHHHHHHhhh---
Confidence 999999999999997 5666678887655443222212 100 00000011111 122223322111
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcC
Q 010125 390 RHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASG 468 (517)
Q Consensus 390 ~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g 468 (517)
+...++....+++|.+.|.+. |+.++.++..+.|.+....-. | +...+ .--.+.|...|. +.|
T Consensus 308 ~~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~l----------p---h~~~~--~~p~~al~~~ly~~~g 371 (450)
T TIGR02618 308 YEYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFL----------P---HIPQD--QFPAQSLAASIYVETG 371 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhC----------C---CCChh--hChHHHHHHHHHHHhC
Confidence 245566777899999999988 898877777777766543200 0 00000 011233333332 344
Q ss_pred cEEEeeeeE-------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 469 KAYMTHAVL-------------GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 469 ~~~~~~~~~-------------~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
+=-+....+ ..--.+|+++---.-|.+++|.+.+.|..+.++
T Consensus 372 ir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 372 VRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred ccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 311111111 012478998843344667999999999888654
No 259
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=1.4e-14 Score=146.56 Aligned_cols=298 Identities=13% Similarity=0.096 Sum_probs=190.0
Q ss_pred hHHHHHHHHHhcccccccc-cccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHH
Q 010125 106 IAGFLGEMLSSGFNIVGFN-WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK 184 (517)
Q Consensus 106 ~~~~~~~~l~~~~n~~~~~-~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~ 184 (517)
+|..+.+.+...++..... | ..+...++.+.+++|+.+.. ++++ ..++|+|+++++..++.+. +
T Consensus 33 ~p~~~~~~~~~~~~~~~~~~Y-~~~~~~~Lr~aia~~~~~~~-~~~~-------~i~it~Ga~~~i~~~~~~~-d----- 97 (335)
T PRK14808 33 FPEDLVDEVFRRLNSDTLRIY-YDSPDEELIEKILSYLDTDF-LSKN-------NVSVGNGADEIIYVMMLMF-D----- 97 (335)
T ss_pred CCHHHHHHHHHHhhhhhhhcC-CCCChHHHHHHHHHHhCCCC-CCcc-------eEEEcCCHHHHHHHHHHHh-C-----
Confidence 3344555555444322222 3 33467778888888876642 5544 6899999999987766543 1
Q ss_pred hcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc
Q 010125 185 IGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT 264 (517)
Q Consensus 185 ~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G 264 (517)
.|++.+++|..+..+++.+|+ +++.+|++. ++.++... +. . ..+++++.++||||
T Consensus 98 ---------~v~v~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~~~~~----~~-~------~~~i~i~nP~NPTG 152 (335)
T PRK14808 98 ---------RSVFFPPTYSCYRIFAKAVGA---KFLEVPLTK--DLRIPEVN----VG-E------GDVVFIPNPNNPTG 152 (335)
T ss_pred ---------cEEECCCCHHHHHHHHHHcCC---eEEEecCCC--cCCCChhH----cc-C------CCEEEEeCCCCCCC
Confidence 267778999999999999999 999999875 35555332 11 1 23788899999999
Q ss_pred cccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcC
Q 010125 265 AVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLST 343 (517)
Q Consensus 265 ~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~ 343 (517)
.+-+.+++.+++ ++++|+++|.+|..+. .......+...++ -.++.++.|.++ ....+|+++... +. .+.+..
T Consensus 153 ~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~--~~~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~~-~~-~~~l~~ 226 (335)
T PRK14808 153 HVFEREEIERIL-KTGAFVALDEAYYEFH--GESYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSSE-KF-IDAYNR 226 (335)
T ss_pred CCcCHHHHHHHH-hcCCEEEEECchhhhc--CCchHHHHHhCCC-EEEEEechhhccCcccceEEEEeCH-HH-HHHHHH
Confidence 999999999999 5899999999997642 1111111211111 245567999998 568889988753 22 223311
Q ss_pred CccccCCccccccccccCCCccccCCCCCCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCee
Q 010125 344 NPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFA 422 (517)
Q Consensus 344 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~ 422 (517)
..... + ...+..+++...+ ..+.+.+..+...+.++++.+.|++. ++++. +++.+
T Consensus 227 ~~~~~----------------~------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~g~ 282 (335)
T PRK14808 227 VRLPF----------------N------VSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM-GYRIT-DSRGN 282 (335)
T ss_pred hcCCC----------------C------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC-CCCCe
Confidence 11000 0 0112222222222 22345666677777788888999887 68765 56777
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWT 502 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~ 502 (517)
++.+++... + ..++.++|.++|+.... +. .++|++++ +.++.+++++
T Consensus 283 f~~~~l~~~----------------------~--~~~~~~~l~~~Gi~V~~---~~--~~~Risi~----~~~~~~~~~~ 329 (335)
T PRK14808 283 FVFIFMEKE----------------------E--KERLLEHLRAKNIAVRS---FR--EGVRITIG----KREENDMILK 329 (335)
T ss_pred EEEEeCCCc----------------------c--HHHHHHHHHHCCeEEEE---CC--CCeEEecC----CHHHHHHHHH
Confidence 776665422 1 24567778888875442 22 47999985 4568899988
Q ss_pred HHHH
Q 010125 503 VVQQ 506 (517)
Q Consensus 503 ~l~~ 506 (517)
+|++
T Consensus 330 ~l~~ 333 (335)
T PRK14808 330 ELEV 333 (335)
T ss_pred HHHh
Confidence 8864
No 260
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.69 E-value=3.8e-14 Score=147.15 Aligned_cols=305 Identities=12% Similarity=0.076 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG 213 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G 213 (517)
....+.+.+++++|.+ ..+++++||+||..|+..+|.....+.|....+..+|.+....|-+...+....+
T Consensus 74 ~~~~~~~~l~~~~~~~---------~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~ 144 (400)
T PTZ00125 74 VLGLAEKYITDLFGYD---------KVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSAST 144 (400)
T ss_pred HHHHHHHHHHhCCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcC
Confidence 4445556667766653 4689999999999999999864322212111134556666667766665555443
Q ss_pred CCCC---------CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhC
Q 010125 214 IDVK---------NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFG 280 (517)
Q Consensus 214 ~g~~---------~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~g 280 (517)
-... .+..++ ..|+++|+++++.. .+.+|++....+++|.+-| +++|.++|++||
T Consensus 145 ~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~l~~~-----~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~ 212 (400)
T PTZ00125 145 DPKCYNNFGPFVPGFELVD-------YNDVEALEKLLQDP-----NVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYN 212 (400)
T ss_pred CcchhccCCCCCCCceEeC-------CCCHHHHHHHhCCC-----CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 2100 112222 23899999998621 2446777777889999877 999999999999
Q ss_pred CeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 281 IWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 281 i~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
+++++|++|.+.......+.....++ ..|.++++ |+++.++ ++|+++++++ +.+.+.... ..
T Consensus 213 ~lli~Dev~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~--~~~~~~~~~--~~---------- 275 (400)
T PTZ00125 213 VLLIVDEIQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLANDD--VMLVIKPGE--HG---------- 275 (400)
T ss_pred CEEEEeccccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcHH--HHhhccCCC--CC----------
Confidence 99999999975432111111111223 46777754 9998775 7898887653 222221100 00
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEecCCCcch
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD----KRFEIVFPCHFAVVCFRVSPSPVLM 435 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~~~~~ 435 (517)
.++ .+.+........+++.+..+++ .++..++.+++++.|+++ +.+..+ .+...++.+.+....
T Consensus 276 ----~t~-~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~--- 343 (400)
T PTZ00125 276 ----STY-GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSD--- 343 (400)
T ss_pred ----CCC-CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCc---
Confidence 011 1111122223334444433333 344445666777766553 222222 233344444443210
Q ss_pred hhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 436 DKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
......+.+.|.++|..+ .+. +..++|++.+ ...++++|++++++|.++..++
T Consensus 344 ------------------~~~~~~~~~~l~~~Gv~v-~~~---~~~~lRi~~~-~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 344 ------------------GVNAWDLCLKLKENGLLA-KPT---HDNIIRFAPP-LVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred ------------------chHHHHHHHHHHHCCeEE-eec---CCCEEEEECC-ccCCHHHHHHHHHHHHHHHHHH
Confidence 112356677777788654 332 3468999974 4568889999999999988766
No 261
>PRK07505 hypothetical protein; Provisional
Probab=99.69 E-value=1.9e-14 Score=149.44 Aligned_cols=300 Identities=11% Similarity=0.079 Sum_probs=173.3
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
.++...++.+.+++++|. . .+++++|++|+..++..++..... +..+.+|+.+...|.|+.....
T Consensus 89 ~~~~~~~l~~~la~~~~~-~---------~~~~~sG~~a~~~ai~~~~~~~~~-----~~~~~vi~~~~~~H~s~~~~~~ 153 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-S---------VLTFTSCSAAHLGILPLLASGHLT-----GGVPPHMVFDKNAHASLNILKG 153 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-C---------EEEECChHHHHHHHHHHHHhcccC-----CCCCCEEEEchhhhHhHHhhhh
Confidence 455667788888898886 2 355556788998888765432111 0123466777789988754322
Q ss_pred H--cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccc
Q 010125 211 I--VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAA 288 (517)
Q Consensus 211 ~--~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA 288 (517)
. .+. +++.+|. .|+++|++++++.+ .+++++.+.+++|.+.|+++|.++|++||+++++|++
T Consensus 154 ~~~~~~---~v~~~~~-------~d~~~l~~~~~~~~------~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa 217 (402)
T PRK07505 154 ICADET---EVETIDH-------NDLDALEDICKTNK------TVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDA 217 (402)
T ss_pred hhhcCC---eEEEeCC-------CCHHHHHHHHhcCC------CEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 2 233 7777775 28899999886532 2677788889999999999999999999999999999
Q ss_pred cccccc--cCcccc-ccccC-CCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCC
Q 010125 289 YAGSAC--ICPEFR-HFIDG-VEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKD 363 (517)
Q Consensus 289 ~g~~~~--~~~~~~-~~~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~ 363 (517)
|+...+ ...... ..+.. ......++.++.|.++.+ .|++++.+++.. +.+.. ..+|
T Consensus 218 ~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~-~~~~~~~~~~---------------- 278 (402)
T PRK07505 218 HGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQI-ELILRYAGPL---------------- 278 (402)
T ss_pred ccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHH-HHHHHhCCCc----------------
Confidence 853211 111011 11111 123345566899998765 366655554432 23321 1111
Q ss_pred ccccCCCC-CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhh
Q 010125 364 WQITLSRR-FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKY 442 (517)
Q Consensus 364 ~~~~~sr~-~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~ 442 (517)
++..+.. .....+.+++..+..+.+.++.++..++.+.+...+... .....+.+..+.. +.
T Consensus 279 -t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~-~~----------- 340 (402)
T PRK07505 279 -AFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYI-GD----------- 340 (402)
T ss_pred -eeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEe-CC-----------
Confidence 1111211 122233444444444555555555544444443332211 1112222222222 11
Q ss_pred hccccchHHHHHHHHHHHHHHHHhcCcEEEeeee---ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 443 VNCLLSEEEQINEFNRELLESINASGKAYMTHAV---LGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 443 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.....++.++|.++|++...... ..+..++|+++. ...+++|++++++.|+++.++
T Consensus 341 -----------~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~-~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 341 -----------EDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFR-ASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred -----------HHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecC-ccCCHHHHHHHHHHHHHHHHh
Confidence 11245677888888976433211 123468999984 567888999999999887654
No 262
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.69 E-value=7e-15 Score=152.84 Aligned_cols=239 Identities=14% Similarity=0.163 Sum_probs=153.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH--
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA-- 204 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s-- 204 (517)
..|...++| +.++++.|.+ ..+++++|++|+..++.+... +++.|+++...|..
T Consensus 55 ~~p~~~~le----~~lA~l~g~~---------~~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~ 110 (418)
T TIGR01326 55 MNPTTDVLE----QRIAALEGGV---------AALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTY 110 (418)
T ss_pred CChhHHHHH----HHHHHHhCCC---------eEEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 445555555 5577777754 468999999999888766532 44567777777643
Q ss_pred --HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 205 --LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 205 --~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
+...+...|+ +++.++.+ |+++|+++++++++ +|++..++|++|.+.|+++|+++|++||++
T Consensus 111 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~t~------~V~le~p~NPtg~v~dl~~I~~la~~~~i~ 174 (418)
T TIGR01326 111 NLFKHTLKRLGI---EVRFVDPD-------DPEEFEKAIDENTK------AVFAETIGNPAINVPDIEAIAEVAHAHGVP 174 (418)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcCCe------EEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3455677888 88888742 78999999876543 777888999999999999999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccccCCcc-cccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEYLKNKA-TESMQVVD 360 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~-~~~~~~~~ 360 (517)
++||++|+.+....+ .. .++|.++.++||+++.+ ...|.+++....... .... -..+.... ........
T Consensus 175 livD~t~~~~~~~~~-l~------~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~-~~~~-~~~~~~~~~~q~a~~~~ 245 (418)
T TIGR01326 175 LIVDNTFATPYLCRP-ID------HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDW-ANGR-FPLFTTPDPSYHGLVFT 245 (418)
T ss_pred EEEECCCchhhcCCc-hh------cCCeEEEECccccccCCccceEEEEEecccccc-cccc-cccccCCCCccccchhh
Confidence 999999976532221 11 26899999999999864 346666665432110 0000 00000000 00000000
Q ss_pred C------------CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 361 Y------------KDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 361 ~------------~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
. ..+.-..+-...+...|..++ |...+..++++...++..+.+.|.+.|++..+
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V 311 (418)
T TIGR01326 246 ETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVAWV 311 (418)
T ss_pred hhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0 000000111223445565554 55677888899889999999999999988654
No 263
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.69 E-value=1.2e-14 Score=151.60 Aligned_cols=340 Identities=13% Similarity=0.050 Sum_probs=193.8
Q ss_pred HHHHHHHHHhccccc-----ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHH
Q 010125 107 AGFLGEMLSSGFNIV-----GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRV 181 (517)
Q Consensus 107 ~~~~~~~l~~~~n~~-----~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~ 181 (517)
...+.+.+...++.. ...|....+...+.+.+++|+.+..|.+-. ...+++|+|+++|+..++.+..+.
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~-----~~~I~it~Ga~~al~~~~~~l~~~- 120 (416)
T PRK09440 47 EDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNIS-----PQNIALTNGSQSAFFYLFNLFAGR- 120 (416)
T ss_pred HHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCC-----hhhEEEccChHHHHHHHHHHHhcc-
Confidence 455666666555432 235666667789999999999988776432 137899999999887666544321
Q ss_pred HHHhcccCCCCeEEEe-CCCCchHHHHHHHHcCC-CCCCEEEEecCCCC-CcccCHHHHHHHHHHhHhcCCcceEEEeec
Q 010125 182 LNKIGRENISKLIVYG-SDQTHCALQKAAQIVGI-DVKNFRAIKTTKSS-SYGLSPDSLMAQINSDVEVGLIPLFLCATI 258 (517)
Q Consensus 182 ~~~~g~~~~~~~~v~~-s~~~H~s~~kaa~~~G~-g~~~v~~vp~d~~~-~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~ 258 (517)
+.+ .+++.|++ .++++..+..++...|. .......++++.++ ++.+|+++|+ +.. .+.+++++.
T Consensus 121 ----~~~-~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~ 187 (416)
T PRK09440 121 ----RAD-GSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSR 187 (416)
T ss_pred ----ccC-CCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEec
Confidence 000 13455666 57888877776654432 00023334443321 3679999997 222 234788889
Q ss_pred cCCccccccC---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCch
Q 010125 259 GTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPR 335 (517)
Q Consensus 259 gtt~~G~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~ 335 (517)
++||||.+-+ +++|+++|++||+|+++|.+|+-.. ....+.........--.+..+++|++.....+|+++.. +.
T Consensus 188 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~-~~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~~-~~ 265 (416)
T PRK09440 188 PTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPF-PGIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIAD-EE 265 (416)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccC-CCcchhhcCccccCCeEEEecccccCCCcceEEEEeCC-HH
Confidence 9999999855 7888999999999999999996321 10001110000111114556799986666888987753 33
Q ss_pred hHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHH-----HHHHHHHHHHHHHHHHhcC
Q 010125 336 ALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRH-----FLRSHVNMAKLFERLVSGD 410 (517)
Q Consensus 336 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~-----~i~~~~~~a~~l~~~l~~~ 410 (517)
.. +.+.....+. +.....+...++...+....+.+ +.+...++.+.+.+.|++.
T Consensus 266 l~-~~~~~~~~~~--------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 324 (416)
T PRK09440 266 II-EALSNMNGII--------------------SLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRY 324 (416)
T ss_pred HH-HHHHHHHHHh--------------------ccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 2221111000 00113344444444442222222 2233344455555666542
Q ss_pred -C--CeEEecCCC-eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-C------
Q 010125 411 -K--RFEIVFPCH-FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG-G------ 479 (517)
Q Consensus 411 -~--~~~l~~~~~-~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g------ 479 (517)
+ ++++. +|+ ...+.+.+.+... ...++.+.+.+.|+....+..+. +
T Consensus 325 l~~~~~~~~-~p~gg~fiw~~~~~~~~----------------------~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~ 381 (416)
T PRK09440 325 LPDEPCLIH-KPEGAIFLWLWFKDLPI----------------------TTEELYQRLKARGVLVVPGHYFFPGLDEDWP 381 (416)
T ss_pred cccCCeEEe-cCCCceEEEEECCCCCC----------------------CHHHHHHHHHHCCEEEechHhhCCCCccccC
Confidence 2 35544 454 3444444432110 02345566667787655544331 1
Q ss_pred --EeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Q 010125 480 --IYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQSA 514 (517)
Q Consensus 480 --~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~~ 514 (517)
..++|++++. +++++++++++|.++.++..+|
T Consensus 382 ~~~~~iRis~~~---~~~~l~~~i~~l~~~~~~~~~~ 415 (416)
T PRK09440 382 HAHQCIRMNYVQ---DDEEIEKGIAILAEEVEKAYAE 415 (416)
T ss_pred CcCceEEEEecC---CHHHHHHHHHHHHHHHHHHhhc
Confidence 2489999953 5779999999999998876654
No 264
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.69 E-value=5.4e-14 Score=145.55 Aligned_cols=302 Identities=12% Similarity=0.047 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCC
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGI 214 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~ 214 (517)
..++.+.|+++++.+ ..+|+++||+||..|+..+|.....+.+. .+..+|......|-+..-+..+.|.
T Consensus 79 ~~~la~~L~~~~~~~---------~~~f~~SGseA~e~Alk~ar~~~~~~~~~--~r~~ii~~~~~yHG~~~~~~~~~~~ 147 (397)
T TIGR03246 79 VLRLAKKLVDATFAD---------KVFFCNSGAEANEAALKLARRYALDKHGA--DKSEIVAFKNSFHGRTLFTVSVGGQ 147 (397)
T ss_pred HHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHHHhcCCC--CCCEEEEECCCcCCccHHHHHhcCC
Confidence 344556666666542 47999999999999999998753221110 1344566666677766555554442
Q ss_pred C---------CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc----cChhHHHHHHHHhCC
Q 010125 215 D---------VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV----DPLKPLCDVAKQFGI 281 (517)
Q Consensus 215 g---------~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i----dpl~eI~~i~~~~gi 281 (517)
. ...+..+|. -|+++|++++.+.+ .+|++.......|.+ +.+++|.++|++||+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~------aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~ 214 (397)
T TIGR03246 148 PKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDKT------CAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNA 214 (397)
T ss_pred cccccCCCCCCCceEEeCC-------CCHHHHHHHhccCe------EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCC
Confidence 1 012333432 27899999986433 367777556666644 459999999999999
Q ss_pred eEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccC
Q 010125 282 WVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDY 361 (517)
Q Consensus 282 ~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 361 (517)
++++|++|.|+.....-+.....++ ..|+++ ..|.++..+..|+++.++. +.+.+... ..
T Consensus 215 llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t--~~K~lggG~pigav~~~~~--i~~~~~~~----~~----------- 274 (397)
T TIGR03246 215 LLIFDEVQTGVGRTGELYAYMHYGV-TPDILT--SAKALGGGFPIGAMLTTTE--IAAHLKVG----TH----------- 274 (397)
T ss_pred EEEEechhhcCCccccchhhhhcCC-CCCEEE--eehhhhCCcceeEEEEcHH--HHHhccCC----Cc-----------
Confidence 9999999966532111111111133 477765 5798876677888887543 23333211 00
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC--CCeeEEEEEecCCCcchhhh
Q 010125 362 KDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFP--CHFAVVCFRVSPSPVLMDKL 438 (517)
Q Consensus 362 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~--~~~~~v~f~~~~~~~~~~~~ 438 (517)
..++ .+.+.......++++.+.. .++.++..++.+++.+.|+++. .+.++.. ....++.+.+.+..
T Consensus 275 -~~t~-~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~------ 343 (397)
T TIGR03246 275 -GTTY-GGNPLACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAY------ 343 (397)
T ss_pred -CCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCch------
Confidence 0011 1111122333444544322 4567788888999998887652 1212211 22233344333210
Q ss_pred hhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 439 KTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
......+.+.|.++|.+... .|..++|++. +...+++||++++++|.++.+++
T Consensus 344 ---------------~~~~~~~~~~l~~~Gv~~~~----~g~~~lR~~p-~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 344 ---------------QGKAKQFVNAAAEEGVIALI----AGPNVVRFAP-SLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred ---------------hhHHHHHHHHHHHCCeEEee----cCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 12346777888888976532 2346899987 45678889999999998887654
No 265
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.69 E-value=3.2e-14 Score=144.15 Aligned_cols=295 Identities=11% Similarity=0.065 Sum_probs=178.9
Q ss_pred HHHHHHhcccc-cccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhccc
Q 010125 110 LGEMLSSGFNI-VGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 188 (517)
Q Consensus 110 ~~~~l~~~~n~-~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~ 188 (517)
+.+.+...+.. ....|. .++...+++.+++| +|++++ ..++|+|+++++...+.+.
T Consensus 36 ~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~----~~~~~~-------~I~~t~G~~~~l~~~~~~~----------- 92 (337)
T PRK03967 36 LKEEIFEELKRVPFNRYP-HITSDPLREAIAEF----YGLDAE-------NIAVGNGSDELISYLVKLF----------- 92 (337)
T ss_pred HHHHHHHHhhcCccccCC-CCCHHHHHHHHHHH----hCcCcc-------eEEEcCCHHHHHHHHHHHh-----------
Confidence 34444433432 233454 34555666555555 466654 6899999998875443221
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC
Q 010125 189 NISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP 268 (517)
Q Consensus 189 ~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp 268 (517)
+++.|++..++|..+..+++..|+ +++.|+++. ++.+|++.|++++. .+ .+++++.++|+||.+-+
T Consensus 93 --~gd~V~v~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~-~~------~~v~~~~P~NPtG~~~~ 158 (337)
T PRK03967 93 --EGKHIVITPPTFGMYSFYAKLNGI---PVIDVPLKE--DFTIDGERIAEKAK-NA------SAVFICSPNNPTGNLQP 158 (337)
T ss_pred --CCCeEEEeCCChHHHHHHHHHcCC---eEEEeecCC--CCCcCHHHHHHhcc-CC------CEEEEeCCCCCCCCCCC
Confidence 334588888999888888899999 999999874 47899999987642 22 25667899999999999
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
.++|.++++ +|+++++|++|+.+. ...........++ -.+..++.|.++ ....+|+++.. +.. .+.+......
T Consensus 159 ~~~l~~i~~-~~~~ii~De~y~~~~--~~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~-~~~-i~~~~~~~~~ 232 (337)
T PRK03967 159 EEEILKVLE-TGKPVVLDEAYAEFS--GKSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIAN-EEI-IDALYRIKPP 232 (337)
T ss_pred HHHHHHHHh-cCCEEEEECchhhhc--ccchHHHHhhCCC-EEEEecchHhhcchhhhheeeecC-HHH-HHHHHhhcCC
Confidence 999999995 799999999997643 1111111111111 245577999998 55888998874 332 2222111000
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCF 426 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f 426 (517)
++ ...+...++...+. .+.+.+.+++..+.++.+.+.|.+. ..++..+.+++
T Consensus 233 ----------------~~------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~ 285 (337)
T PRK03967 233 ----------------FS------LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLL 285 (337)
T ss_pred ----------------CC------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEE
Confidence 00 12233333333332 3345555566666777777777653 12333333322
Q ss_pred EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 427 RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
.+ .+.+.|.++|+..... ......++|+++. +.++.++++++|++
T Consensus 286 ~~------------------------------~~~~~l~~~gi~v~~~-~~~~~~~~Ri~~~----~~~~~~~l~~~l~~ 330 (337)
T PRK03967 286 KL------------------------------DAYDYLLENGIVVRKL-SGRLEGHIRVTVG----KREENDEFIKALKE 330 (337)
T ss_pred hH------------------------------HHHHHHHHCCEEEEeC-CCCCCCeEEEecC----CHHHHHHHHHHHHH
Confidence 11 1456666778544322 2233568999985 45577888888866
Q ss_pred HHH
Q 010125 507 HLE 509 (517)
Q Consensus 507 ~~~ 509 (517)
+.+
T Consensus 331 ~~~ 333 (337)
T PRK03967 331 IKE 333 (337)
T ss_pred HHH
Confidence 543
No 266
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.69 E-value=5.3e-15 Score=149.40 Aligned_cols=337 Identities=11% Similarity=0.087 Sum_probs=189.9
Q ss_pred cceeCCCCCChHHHHHHHHHhcc-cccccc------cccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchH
Q 010125 96 YFAYFPSSGSIAGFLGEMLSSGF-NIVGFN------WISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 168 (517)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~l~~~~-n~~~~~------~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 168 (517)
.+..+++-......+.+.+.+.+ |.+... |.......++|+.+.+.++++||+++...+ .-+=..||+.
T Consensus 22 ~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~----anvqp~SGs~ 97 (399)
T PF00464_consen 22 TLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWY----ANVQPHSGSQ 97 (399)
T ss_dssp SEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEE----EE---SSHHH
T ss_pred CccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccce----EEeecCCchH
Confidence 45555555444455556665554 444332 334456789999999999999999854311 2344567899
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEEE-eC--CCCchHHHHHHHH-------cCCCCCCEEEEecCCCCCcccCHHHHH
Q 010125 169 AILCTLTAARDRVLNKIGRENISKLIVY-GS--DQTHCALQKAAQI-------VGIDVKNFRAIKTTKSSSYGLSPDSLM 238 (517)
Q Consensus 169 a~~~al~~ar~~~~~~~g~~~~~~~~v~-~s--~~~H~s~~kaa~~-------~G~g~~~v~~vp~d~~~~~~~d~~~Le 238 (517)
||+.++.+..+ +++.|+ .+ .-.|.|....... ... +++.+++|++ ++.+|.++++
T Consensus 98 An~av~~aLl~-----------pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~---~~~~y~~d~~-~~~ID~d~l~ 162 (399)
T PF00464_consen 98 ANLAVYMALLK-----------PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYF---ESVPYPVDPD-TGLIDYDELE 162 (399)
T ss_dssp HHHHHHHHHT------------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHS---EEEEEEB-TT-TSSB-HHHHH
T ss_pred HHHHHHHHHHh-----------hcCcEEecChhhcccccccccccccccccccceE---EEEeeeeecC-CCeECHHHHH
Confidence 99877776654 444444 32 3356664433222 334 6778888864 6899999999
Q ss_pred HHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeecccc
Q 010125 239 AQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHK 318 (517)
Q Consensus 239 ~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK 318 (517)
+.+++.+ |.+|++-.-. .--.-|++++.+||++.|.+|++|+||-.+......+.+-+ +.||+++.+.||
T Consensus 163 ~~a~~~k-----PklIi~G~S~--y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~---~~ADvvt~sThK 232 (399)
T PF00464_consen 163 KLAKEHK-----PKLIICGASS--YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF---PYADVVTGSTHK 232 (399)
T ss_dssp HHHHHH-------SEEEEE-SS--TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC---CTSSEEEEESSG
T ss_pred HHHhhcC-----CCEEEECchh--ccCccCHHHHHHHHHhcCcEEEecccccccceehheecCcc---ccceEEEeeccc
Confidence 9998754 5566554322 33446899999999999999999999988776554444333 479999999999
Q ss_pred ccCCCCcceEEEEeCc------------hhHHhhhcCCccccCCccccccccccCCCccccCCCCC-CchHHHHHHHHhc
Q 010125 319 WFFATLDCCCLWVKDP------------RALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRF-RSLKLWFVIRNYG 385 (517)
Q Consensus 319 ~l~~p~~~g~l~~~~~------------~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g 385 (517)
+|.+|. +|++++++. ..+.+.+.. .++. +.+++-.. ...++..+++...
T Consensus 233 tl~GPr-ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~---avfP--------------~~qg~~h~~~iaalAval~ea~ 294 (399)
T PF00464_consen 233 TLRGPR-GGIILTNKGSKNVDKKGKEIDEELAEKIDS---AVFP--------------GLQGGPHMHRIAALAVALKEAL 294 (399)
T ss_dssp GG-SSS--EEEEES-SEEEE-TTS-EEEHHHHHHHHH---HHTT--------------TT-SS--HHHHHHHHHHHHHHT
T ss_pred cccccC-ceEEEEcCCccccCCcccccHHHHHHHhcc---ccCC--------------CcccCcchhHHHHHHHHHhccc
Confidence 999985 688888711 112211110 0110 11122111 2234455666555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH
Q 010125 386 VANLRHFLRSHVNMAKLFERLVSGDKRFEIVF-PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI 464 (517)
Q Consensus 386 ~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 464 (517)
...+++..++..++|+.|.+.|.+. ||.++. -.+..+|...+.+.++ ......+.|
T Consensus 295 ~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~~~----------------------~g~~a~~~L 351 (399)
T PF00464_consen 295 SPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRSFGI----------------------DGKEAEKAL 351 (399)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGGTS-----------------------HHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEeccccc----------------------chHHHHHHH
Confidence 5667889999999999999999987 999985 3556677777654321 123444556
Q ss_pred HhcCcEEEeeeeEC------CEeEEEEEec---CCCCcHHHHHHHHHH
Q 010125 465 NASGKAYMTHAVLG------GIYAIRFATG---ATLTEKRHVVVAWTV 503 (517)
Q Consensus 465 ~~~g~~~~~~~~~~------g~~~lR~~~~---~~~t~~~di~~l~~~ 503 (517)
.+.|+.+ ....+. ....||+... .....++|+.++.+.
T Consensus 352 e~~gI~v-nkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 352 EEAGIIV-NKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp HHTTEE--EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred HhcCeee-cccccCCCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 6667643 322221 1357999862 223345666665443
No 267
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.68 E-value=6.5e-15 Score=150.30 Aligned_cols=233 Identities=16% Similarity=0.196 Sum_probs=158.2
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCc-
Q 010125 124 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTH- 202 (517)
Q Consensus 124 ~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H- 202 (517)
....+|...++|+. ++++.|.+ ..+.+++|+.|+..++.+... +++.|+++...|
T Consensus 59 ~r~~~P~~~~lE~~----la~leg~~---------~av~~sSG~aAi~~al~all~-----------~GD~Vl~~~~~yg 114 (384)
T PRK06434 59 TRWGNPTVQAFEEK----YAVLENAE---------HALSFSSGMGAITSAILSLIK-----------KGKRILSISDLYG 114 (384)
T ss_pred eCCCChhHHHHHHH----HHHHhCCC---------cEEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCccc
Confidence 33467888888876 55555654 468888899888877765421 556677775532
Q ss_pred ---hHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 203 ---CALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 203 ---~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
..+...+...|+ +++.+++++.+++.++. ++ +.+|+...++++++.+.|+++|+++|+++
T Consensus 115 ~t~~~~~~~~~~~Gi---~v~fvd~~~~~~~~l~~--------~~------tklv~~e~~snpt~~v~Di~~I~~la~~~ 177 (384)
T PRK06434 115 QTFYFFNKVLKTLGI---HVDYIDTDRLNSLDFDP--------SN------YDLIYAESITNPTLKVPDIKNVSSFCHEN 177 (384)
T ss_pred hHHHHHHHHHHhcCc---EEEEECCCChhheeecC--------CC------eeEEEEEcCCCCCceeecHHHHHHHHHHc
Confidence 233466777899 99999886423233221 11 23788899999999999999999999999
Q ss_pred CCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCc--ceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 280 GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLD--CCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 280 gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
| ++||++++.....-+ .. .++|.+++|+||+++++-+ .|++.+++++...+... +..
T Consensus 178 ~--lvVD~t~~s~~~~~p-l~------~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~-----~~~------- 236 (384)
T PRK06434 178 D--VIVDATFASPYNQNP-LD------LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVE-----RRK------- 236 (384)
T ss_pred C--eEEECCCCCcccCCc-hh------cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHH-----HHH-------
Confidence 9 467999976543211 11 2799999999999988765 67776766543222110 000
Q ss_pred cccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------CeeEEEE
Q 010125 358 VVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----------HFAVVCF 426 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----------~~~~v~f 426 (517)
..+.....+..|..++ |.+.+..++++..+++..+.+.|+++|.++-+.-| ..++++|
T Consensus 237 ---------~~G~~~~~~~A~l~~~--gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf 305 (384)
T PRK06434 237 ---------TLGSNPDPIQAYLALR--GLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSF 305 (384)
T ss_pred ---------hcCCCCCHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEE
Confidence 0112224456665554 66888999999999999999999999987533322 2467888
Q ss_pred Eec
Q 010125 427 RVS 429 (517)
Q Consensus 427 ~~~ 429 (517)
.+.
T Consensus 306 ~l~ 308 (384)
T PRK06434 306 ELR 308 (384)
T ss_pred EEC
Confidence 875
No 268
>PRK08637 hypothetical protein; Provisional
Probab=99.68 E-value=3.4e-14 Score=146.83 Aligned_cols=335 Identities=10% Similarity=0.042 Sum_probs=194.1
Q ss_pred HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcC-CCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhc
Q 010125 108 GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLK-LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIG 186 (517)
Q Consensus 108 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g 186 (517)
..+.+.+..........|....+...+.+.+.+++.+..+ ..+.. ...+++|+|+++++..++.+..+
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~----~~~I~it~G~~~al~~~~~~l~~------- 91 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKK----MSLPIVTNALTHGLSLVADLFVD------- 91 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccc----cceeeEccchHHHHHHHHHHhcC-------
Confidence 3344444432233445666666777788888877776532 22110 02578999999988766554432
Q ss_pred ccCCCCeEEEeCCCCchHHHHHH-HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 187 RENISKLIVYGSDQTHCALQKAA-QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 187 ~~~~~~~~v~~s~~~H~s~~kaa-~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
+++.|++.+++|..+..++ ...|+ +++.+|+..+ ++.+|+++|+++++..... ...+++.+.++||||.
T Consensus 92 ----~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~--~~~~~~~~~P~NPTG~ 161 (388)
T PRK08637 92 ----QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDE-DGGFDTDALKEALQAAYNK--GKVIVILNFPNNPTGY 161 (388)
T ss_pred ----CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCC-CCcCCHHHHHHHHHhhccC--CCEEEEEeCCCCCCCC
Confidence 5667888999998888875 46798 9999998422 3478999999998721111 1246777789999998
Q ss_pred cc---ChhHHHHHHHH-----hCCeEEcccccccccccCcccccccc---CC-CCCCeee-ecccccc-CCCCcceEEEE
Q 010125 266 VD---PLKPLCDVAKQ-----FGIWVHVDAAYAGSACICPEFRHFID---GV-EGADSFS-LNAHKWF-FATLDCCCLWV 331 (517)
Q Consensus 266 id---pl~eI~~i~~~-----~gi~lhvDaA~g~~~~~~~~~~~~~~---g~-~~aDsi~-~~~hK~l-~~p~~~g~l~~ 331 (517)
+- .+++|+++|++ |++|+++|.+|..+.+........+. .. +++-++. .++.|.+ .....+|++++
T Consensus 162 ~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~ 241 (388)
T PRK08637 162 TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFITF 241 (388)
T ss_pred CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEEE
Confidence 84 46777777775 89999999999776542211111111 11 1222233 2789964 45588999987
Q ss_pred eC----chhHHhhhcCCc-cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHH----HHHHHHHHHH
Q 010125 332 KD----PRALVSSLSTNP-EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHF----LRSHVNMAKL 402 (517)
Q Consensus 332 ~~----~~~~~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~----i~~~~~~a~~ 402 (517)
.. ...+.+.+.... .++... .. ....+...++...+....+.+. +....+..+.
T Consensus 242 ~~~~~~~~~l~~~~~~~~~~~~~~~--------------~~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~ 304 (388)
T PRK08637 242 GTKAGSSQTVKEALEKKVKGLIRSN--------------IS---NGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEK 304 (388)
T ss_pred ccccCCcHHHHHHHHHHHHHHhhcc--------------cC---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 53 222222221100 000000 00 0122333334444433333333 3334445555
Q ss_pred HHHHHhcC---CCeEEecCCCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeE
Q 010125 403 FERLVSGD---KRFEIVFPCHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVL 477 (517)
Q Consensus 403 l~~~l~~~---~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~ 477 (517)
+.+.|++. +++.+. +|+.+++.+ ++. . ....++.+.+. +.|+....
T Consensus 305 ~~~~l~~~~~~~~~~~~-~~~~g~~~~~~l~-~-----------------------~~~~~l~~~l~~~~gv~~~~---- 355 (388)
T PRK08637 305 TKEVLYDGKYDDAWQAY-PFNSGYFMCLKLK-G-----------------------VDAEELRVHLLEKYGIGTIA---- 355 (388)
T ss_pred HHHHHHhhCCCCCcccc-cccceEEEEecCC-h-----------------------HHHHHHHHHHhhhcceEEEe----
Confidence 66666554 246554 455554444 432 1 11345667665 45664432
Q ss_pred CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 478 GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 478 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.+..++|++++. .++++++..++.|.++.+++
T Consensus 356 ~~~~~iRi~~~~--~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 356 LNETDLRIAFSC--VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred ccCCceEEEeec--CCHHHHHHHHHHHHHHHHhc
Confidence 245689999964 46779999999998887654
No 269
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.68 E-value=1.8e-14 Score=140.41 Aligned_cols=328 Identities=14% Similarity=0.111 Sum_probs=220.8
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
..+...+.+++++.+.+.-|-+..+. +...+++.|+|.||.+.+-...+ |+...+++.+.+..+.+
T Consensus 120 y~Gl~~frqa~A~Fm~~~r~~~v~fd---P~~~Vv~~G~T~ane~l~fcLad-----------pgdafLvPtPyY~gfdr 185 (471)
T KOG0256|consen 120 YHGLPSFRQAVAEFMERARGNRVKFD---PERVVVTNGATSANETLMFCLAD-----------PGDAFLVPTPYYPGFDR 185 (471)
T ss_pred ccCchHHHHHHHHHHHHHhCCCCccC---ccceEEecccchhhHHHHHHhcC-----------CCceeeecCCCCCcccc
Confidence 34677889999999999888655442 23689999999998655444333 77788899888888887
Q ss_pred HHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhCCeE
Q 010125 208 AAQ-IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWV 283 (517)
Q Consensus 208 aa~-~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~gi~l 283 (517)
-++ ..|+ +++.|.++..+++++++++||+++++..+.|.+..-|+++.|+||.|.+-+ +..+..+|.++|+.+
T Consensus 186 dl~~rTgv---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHv 262 (471)
T KOG0256|consen 186 DLRWRTGV---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHV 262 (471)
T ss_pred cceeccCc---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEE
Confidence 665 4588 999999988778999999999999999999999999999999999999854 667777788999999
Q ss_pred EcccccccccccCccccccccCCC----CCC--eeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccc-cCCccccc
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVE----GAD--SFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEY-LKNKATES 355 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~----~aD--si~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~y-l~~~~~~~ 355 (517)
++|..|++..+..+++.+.+.-.+ ..| -|.++..|=++.| +..|+++..++.... +......| +....
T Consensus 263 I~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~Vvs-aA~kmssf~~vSs~--- 338 (471)
T KOG0256|consen 263 ISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVS-AATKMSSFGLVSSQ--- 338 (471)
T ss_pred EeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHH-HHHHHhhccCCcHH---
Confidence 999999999887666654432211 233 3678899999877 678889888776543 22111111 11000
Q ss_pred cccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcch
Q 010125 356 MQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLM 435 (517)
Q Consensus 356 ~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~ 435 (517)
+ | .-++...+=..+-.+-+++..+|....-+++.+.|+++ |+..+ +...+++||.--..-+
T Consensus 339 ---------t-Q-----~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~lL-- 399 (471)
T KOG0256|consen 339 ---------T-Q-----YLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRKLL-- 399 (471)
T ss_pred ---------H-H-----HHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHHhc--
Confidence 0 0 00111111122233445566677777778889999887 77776 5667777775322110
Q ss_pred hhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 436 DKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL---GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
+ ....++ -..|-+++...-++.+++... ...+|+|+|+.+ +.++.++-++++|+..+...
T Consensus 400 --~-------s~tfe~-----El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn--~~~~t~~~am~Ri~~~~~~~ 462 (471)
T KOG0256|consen 400 --T-------SLTFEG-----ELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN--MSEETLEVAMRRLKQFLDSQ 462 (471)
T ss_pred --C-------cCChHH-----HHHHHHHHHHhhccccCCCCcceecCCCeEEEEecc--CCHHHHHHHHHHHHHHHHhh
Confidence 0 000111 124445555543344454432 346899999964 56666776888888887643
No 270
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.67 E-value=3e-14 Score=148.05 Aligned_cols=164 Identities=13% Similarity=0.116 Sum_probs=114.9
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCch------HHHHHH
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHC------ALQKAA 209 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~------s~~kaa 209 (517)
..+.+.+++++|.+. .+++++|+.|++.++.+. . ++..|++|+..|. ++...+
T Consensus 125 ~~le~~lA~l~gae~---------alvv~sg~aAi~l~l~~l-~-----------~GdeVIvs~~e~v~~ggs~~i~~~~ 183 (454)
T TIGR00474 125 SHVEGLLCELTGAED---------ALVVNNNAAAVLLALNTL-A-----------KGKEVIVSRGELVEIGGSFRIPDVM 183 (454)
T ss_pred HHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHHh-C-----------CcCEEEECCChhhhhcchhhHHHHH
Confidence 456788899999864 466788888887666332 1 5566888876653 344566
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCc--cc--cccChhHHHHHHHHhCCeEEc
Q 010125 210 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA--IT--AVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~--~G--~idpl~eI~~i~~~~gi~lhv 285 (517)
+..|+ +++.++++. ..++++++++|+++++ +|+.++.+++ .| .+-|+++|+++||+||++++|
T Consensus 184 ~~~G~---~~~~v~~~~----~~~l~dle~aI~~~T~------lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~viv 250 (454)
T TIGR00474 184 EQSGA---KLVEVGTTN----RTHLKDYEDAITENTA------LLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVME 250 (454)
T ss_pred HHcCC---EEEEeCCCC----CCCHHHHHHhcCcCCE------EEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 77888 899887642 4689999999987664 6666776665 46 478999999999999999999
Q ss_pred cccccccccc----CccccccccC-CCCCCeeeeccccccCCCCcceEEEEeCc
Q 010125 286 DAAYAGSACI----CPEFRHFIDG-VEGADSFSLNAHKWFFATLDCCCLWVKDP 334 (517)
Q Consensus 286 DaA~g~~~~~----~~~~~~~~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~~~~ 334 (517)
|++.|...-. .+......+. -.++|.+++++|||+++|. +|+++.+++
T Consensus 251 D~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~ 303 (454)
T TIGR00474 251 DLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKE 303 (454)
T ss_pred ECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECHH
Confidence 9864332000 0000000010 1379999999999999884 888888754
No 271
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.67 E-value=6.3e-14 Score=144.37 Aligned_cols=300 Identities=11% Similarity=0.025 Sum_probs=168.3
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
....++.+++++++|.+ ..+++.||++|+..++.+++..... . +.++..|++.+.++......+...
T Consensus 69 ~~~~~l~~~la~~~g~~---------~~~~~~sg~~a~~~a~~~~~~~~~~-~---~~~~~~vi~~~~~yh~~~~~~~~~ 135 (379)
T TIGR00707 69 EPQEELAEKLVEHSGAD---------RVFFCNSGAEANEAALKLARKYTGD-K---GKEKKKIIAFENSFHGRTMGALSA 135 (379)
T ss_pred HHHHHHHHHHHhhCCCC---------EEEEeCCcHHHHHHHHHHHHHHhhc-c---CCCCCeEEEECCCcCCccHHHHHh
Confidence 44556677788888865 4789999999999999877643210 0 112344555444433222222233
Q ss_pred CCCC-CCEEEEecCCCCCcc--cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc----cChhHHHHHHHHhCCeEEc
Q 010125 213 GIDV-KNFRAIKTTKSSSYG--LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV----DPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 213 G~g~-~~v~~vp~d~~~~~~--~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i----dpl~eI~~i~~~~gi~lhv 285 (517)
+... ......++..+-.+. -|+++|++.+++.+ .+|+++..++++|.+ +++++|.++|++||+++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~ 209 (379)
T TIGR00707 136 TGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDET------AAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIF 209 (379)
T ss_pred cCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCe------eEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2200 000112222111111 18999999987543 366667666666754 2489999999999999999
Q ss_pred ccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCcc
Q 010125 286 DAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQ 365 (517)
Q Consensus 286 DaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 365 (517)
|++|.++............++ ..|.++ ++|.++.++..|+++..+ + +.+.+.... .. . +
T Consensus 210 De~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~~-~-~~~~~~~~~----~~----------~--~ 268 (379)
T TIGR00707 210 DEVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAKE-E-VAEAFTPGD----HG----------S--T 268 (379)
T ss_pred eccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEcH-H-HHhhhcCCC----CC----------C--C
Confidence 999976422111010001122 345554 689999778899887753 2 222332100 00 0 0
Q ss_pred ccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe-c--CCCeeEEEEEecCCCcchhhhhhhh
Q 010125 366 ITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV-F--PCHFAVVCFRVSPSPVLMDKLKTKY 442 (517)
Q Consensus 366 ~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~-~--~~~~~~v~f~~~~~~~~~~~~~~~~ 442 (517)
+ +...+....++++++.+.. .++.++..++++++++.|++. +.... . ++..+++.+.+.+.
T Consensus 269 ~-~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~----------- 332 (379)
T TIGR00707 269 F-GGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEAP----------- 332 (379)
T ss_pred C-CCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecCc-----------
Confidence 0 1111233344555554432 245567777888888877654 22211 1 12344556655322
Q ss_pred hccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 443 VNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 443 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
..++.++|.++|+..... +..++|+++. ...+++++++++++|+++
T Consensus 333 --------------~~~~~~~l~~~Gv~v~~~----~~~~lRi~~~-~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 333 --------------CKDIVKKALEKGLLVNCA----GPKVLRFLPP-LIITKEEIDEAVSALEEA 378 (379)
T ss_pred --------------HHHHHHHHHHCCcEEeeC----CCCEEEEECC-CcCCHHHHHHHHHHHHHh
Confidence 256777788888755432 3468999973 445788999999999764
No 272
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.66 E-value=1e-13 Score=139.92 Aligned_cols=284 Identities=15% Similarity=0.107 Sum_probs=194.5
Q ss_pred HHHHHHHHcC-CCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 138 VMDWLGQMLK-LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 138 v~~~l~~l~g-~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
+.+.+++.+| .+++ .+++..|+++.+-..+.+.+. +++.|+++.+++..+...++..|+
T Consensus 62 l~~a~a~~~~~~~~~-------~V~~gnGsde~i~~l~~~~~~-----------~gd~vl~~~Ptf~~Y~~~a~~~g~-- 121 (356)
T COG0079 62 LRAALAEYYGVVDPE-------NVLVGNGSDELIELLVRAFVE-----------PGDTVLIPEPTFSMYEIAAQLAGA-- 121 (356)
T ss_pred HHHHHHHHhCCCCcc-------eEEEcCChHHHHHHHHHHhhc-----------CCCEEEEcCCChHHHHHHHHhcCC--
Confidence 3345566666 4443 456677777766555544433 556688888999999999999999
Q ss_pred CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh--CCeEEcccccccccc
Q 010125 217 KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAGSAC 294 (517)
Q Consensus 217 ~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~--gi~lhvDaA~g~~~~ 294 (517)
+++.||.++ +.+|++++.+++.++.+ +|+++.|+||||..-+.++|.++++.. +.+++||+||.-+.-
T Consensus 122 -~~~~v~~~~---~~~d~~~~~~~~~~~~~------lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~ 191 (356)
T COG0079 122 -EVVKVPLKE---FRLDLDAILAAIRDKTK------LVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSP 191 (356)
T ss_pred -eEEEecccc---cccCHHHHHHhhhcCCC------EEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCC
Confidence 999999863 89999999999987443 899999999999998888888888754 889999999976653
Q ss_pred cCccccccccCCCCCC--eeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC
Q 010125 295 ICPEFRHFIDGVEGAD--SFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR 371 (517)
Q Consensus 295 ~~~~~~~~~~g~~~aD--si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 371 (517)
+....++ ..-+ .+.=++.|.++ +...+|+. +.+++.........++|-.
T Consensus 192 --~~~~~l~---~~~~nlivlRTfSKa~gLAGlRlGy~-ia~~~~i~~l~~vr~p~~v---------------------- 243 (356)
T COG0079 192 --ESSLELL---KYPPNLIVLRTFSKAFGLAGLRVGYA-IANPELIAALNKVRPPFNV---------------------- 243 (356)
T ss_pred --chhhhhc---cCCCCEEEEEecHHhhhcchhceeec-cCCHHHHHHHHHhcCCCCC----------------------
Confidence 2211111 1223 45566999775 55788884 4455544322233333311
Q ss_pred CCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchH
Q 010125 372 FRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEE 450 (517)
Q Consensus 372 ~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 450 (517)
..+...++...+- .+-+++.+++....++++.+.|++++ +.-+.+...|++.++....
T Consensus 244 -~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~~------------------- 302 (356)
T COG0079 244 -SSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPDA------------------- 302 (356)
T ss_pred -CHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCCc-------------------
Confidence 2233334444332 35677888888899999999999986 5523366677777776532
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEeeee-ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 451 EQINEFNRELLESINASGKAYMTHAV-LGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 451 ~~~~~~~~~l~~~l~~~g~~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
. ...+.+.|.++|++...... .....++|+++. ++++-++++++|+++..
T Consensus 303 ----~-~~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~ 353 (356)
T COG0079 303 ----E-AAALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLK 353 (356)
T ss_pred ----c-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHh
Confidence 2 34677788888987655433 223569999985 45577999999988764
No 273
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.66 E-value=1.1e-13 Score=133.76 Aligned_cols=316 Identities=17% Similarity=0.198 Sum_probs=195.8
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC
Q 010125 122 GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT 201 (517)
Q Consensus 122 ~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~ 201 (517)
....-+.|....+|+++.. |=| . -.++.+++|..|..+|+..... +++.|+.|..-
T Consensus 55 iYsRi~NPT~~vlE~RiAa----LEG---G------~aa~a~aSG~AA~~~ai~~la~-----------aGD~iVss~~L 110 (426)
T COG2873 55 IYTRIMNPTTDVLEERIAA----LEG---G------VAALAVASGQAAITYAILNLAG-----------AGDNIVSSSKL 110 (426)
T ss_pred eeeeccCchHHHHHHHHHH----hhc---c------hhhhhhccchHHHHHHHHHhcc-----------CCCeeEeeccc
Confidence 3344567888889877543 211 1 1467788888888888876543 34445555443
Q ss_pred c----hHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHH
Q 010125 202 H----CALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAK 277 (517)
Q Consensus 202 H----~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~ 277 (517)
+ .-+....+.+|+ ++++|..+ |++.++++|+++++ +|.+..-.||-+.+-|++.|++|||
T Consensus 111 YGGT~~lf~~tl~~~Gi---~v~fvd~~-------d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ia~iAh 174 (426)
T COG2873 111 YGGTYNLFSHTLKRLGI---EVRFVDPD-------DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEAIAEIAH 174 (426)
T ss_pred cCchHHHHHHHHHhcCc---EEEEeCCC-------CHHHHHHHhCcccc------eEEEEeccCCCccccCHHHHHHHHH
Confidence 3 334556688999 99999643 79999999999997 6777777889999999999999999
Q ss_pred HhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCC-CCcceEEEEeCchhHHhhh-------cCCccccC
Q 010125 278 QFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFA-TLDCCCLWVKDPRALVSSL-------STNPEYLK 349 (517)
Q Consensus 278 ~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~~~~~~~~~~~-------~~~~~yl~ 349 (517)
++|+.++||-.++..+++-| .++ +||.++-|..||++. .-..|.+++-....-...- ...+.|..
T Consensus 175 ~~gvpliVDNT~atpyl~rP-~~h------GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhG 247 (426)
T COG2873 175 RHGVPLIVDNTFATPYLCRP-IEH------GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHG 247 (426)
T ss_pred HcCCcEEEecCCCcceecch-hhc------CCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccc
Confidence 99999999999988755433 222 899999999999963 2345555553322100000 11122211
Q ss_pred CccccccccccCC-CccccCCC----CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----
Q 010125 350 NKATESMQVVDYK-DWQITLSR----RFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC----- 419 (517)
Q Consensus 350 ~~~~~~~~~~~~~-~~~~~~sr----~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~----- 419 (517)
-...+..+...+. .--.++-| ...+...|..++ |.|-+.-+++|++++|..+.+.|+++|.+.-++-|
T Consensus 248 l~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lq--GlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~ 325 (426)
T COG2873 248 LVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQ--GLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASH 325 (426)
T ss_pred eehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHh--chhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCC
Confidence 1100000000000 00001112 123345555543 78889999999999999999999999988766421
Q ss_pred -------------CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHH--HHHHHHHHhcCc---EEEeee--eE--
Q 010125 420 -------------HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFN--RELLESINASGK---AYMTHA--VL-- 477 (517)
Q Consensus 420 -------------~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~l~~~g~---~~~~~~--~~-- 477 (517)
...+++|.++... +...++. .+|...+..-|. +.+.+. ..
T Consensus 326 ~~h~la~kyl~~g~g~vltF~~kgg~------------------ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~q 387 (426)
T COG2873 326 PYHALAKKYLPKGAGAVLTFGVKGGY------------------EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQ 387 (426)
T ss_pred cchhHHHhhccCCCceEEEEEecChH------------------HHHHHHHHHHHHHHhhccccccceeEecCcccchhc
Confidence 2457788887541 1111221 233333333332 233332 11
Q ss_pred --------C--CEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 478 --------G--GIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 478 --------~--g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
. ....+|+|++ .||++.++..|++..+
T Consensus 388 l~~ee~~~aGv~~~~IRlSVG-----IEd~~DiiaDl~qAl~ 424 (426)
T COG2873 388 LSEEEQAAAGVTPDLIRLSVG-----IEDIDDIIADLEQALE 424 (426)
T ss_pred CCHHHHHhcCCCCCcEEEEec-----cCCHHHHHHHHHHHHh
Confidence 1 2568999994 3588888888887654
No 274
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.66 E-value=2.9e-13 Score=140.52 Aligned_cols=305 Identities=10% Similarity=0.064 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC-chHHHHHHHH
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT-HCALQKAAQI 211 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~-H~s~~kaa~~ 211 (517)
....++.+.+++++|.+ ..+++++|++||..|+..+|....++.+.. .++.+|++.+.+ |-+...+..+
T Consensus 79 ~~~~~l~~~l~~~~~~~---------~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~-~~~~~i~~~~~~yhg~~~~~~~~ 148 (401)
T TIGR01885 79 DVFGEFAEYVTKLFGYD---------KVLPMNTGAEAVETAIKLARKWGYKVKGIP-ENQAIIVSAKGNFHGRTLGAISM 148 (401)
T ss_pred HHHHHHHHHHHhhcCCC---------EEEEeCccHHHHHHHHHHHHHHhhhhcCCC-CCCCEEEEECCCcCcccHHHHhC
Confidence 34455556677777753 468999999999999999987532221111 134556655666 5455555554
Q ss_pred cCC-------C--CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHH
Q 010125 212 VGI-------D--VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQ 278 (517)
Q Consensus 212 ~G~-------g--~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~ 278 (517)
.|- | ...+..+|. -|+++|++++++. +....+|++....+++|.+-| +++|.++|++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~ 218 (401)
T TIGR01885 149 STDPDSRTNFGPYVPGFKKIPY-------NNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTK 218 (401)
T ss_pred cCCcccccccCCCCCCceEeCC-------CCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 431 1 012344432 2789999988642 223346666666777898877 9999999999
Q ss_pred hCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 279 FGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
||+++++|++|.++......+.....++ ..|.++++ |.++.. +..|+++.+ ++. .+.+... +.
T Consensus 219 ~~~lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~-~~i-~~~~~~~--~~--------- 282 (401)
T TIGR01885 219 HNVLLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGGVYPVSAVLAD-DDV-MLTIKPG--EH--------- 282 (401)
T ss_pred cCCEEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCCCCCcEEEEEc-HHH-HhhccCC--CC---------
Confidence 9999999999865322111101011223 46877764 998765 457777764 322 2222210 00
Q ss_pred cccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEecCCCcch
Q 010125 358 VVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF--PCHFAVVCFRVSPSPVLM 435 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~~~~~ 435 (517)
..+. ++.+.....+.++++.+..+. +.++..++++++.+.|++++ ..++. .....++.+.+....
T Consensus 283 -----~~t~-~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~--- 349 (401)
T TIGR01885 283 -----GSTY-GGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESK--- 349 (401)
T ss_pred -----CCCC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCc---
Confidence 0011 112223334455555554333 34567778999999998873 22221 123334444343220
Q ss_pred hhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 436 DKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
. .....++.+.|.++|... .+. +...+|++.. ...++++|++++++|+++.
T Consensus 350 -------------~----~~~~~~l~~~l~~~Gv~v-~~~---~~~~lRi~p~-l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 350 -------------T----GRTAWDLCLKLKEKGLLA-KPT---HGNIIRLAPP-LVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred -------------c----hhHHHHHHHHHHhCCEEE-Eec---CCCEEEEeCC-ccCCHHHHHHHHHHHHHHh
Confidence 0 112467788888888654 332 3468999984 5778889999999998764
No 275
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.66 E-value=4.3e-14 Score=136.82 Aligned_cols=299 Identities=16% Similarity=0.148 Sum_probs=201.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH
Q 010125 130 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA 209 (517)
Q Consensus 130 ~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa 209 (517)
-...||++ |++|-+-+ ..++.++.-.||-..|.+.-.. .|+.+||-.+..|.|+...+
T Consensus 217 ~hv~LE~e----LA~LHqK~---------aALlFsSCfVANDstLftLak~---------lpgcei~SD~gNHASMI~GI 274 (570)
T KOG1360|consen 217 HHVRLEAE----LADLHQKE---------AALLFSSCFVANDSTLFTLAKK---------LPGCEIFSDEGNHASMIQGI 274 (570)
T ss_pred hhhhHHHH----HHHHhcCc---------ceeeeeeeeeccchHHHHHHHH---------CCCcEEeccccchHHHHHHh
Confidence 34556655 55655544 3344455555665444443222 28888988888999999998
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccc
Q 010125 210 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
+-.++ .=..+. .-|+++|++.++...+ ..|.+|.+....+..|+|.||+||++++++||..-.+|..|
T Consensus 275 rns~v---~K~IFr-------HND~~hL~~lL~~~~~--svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVH 342 (570)
T KOG1360|consen 275 RNSRV---PKHIFR-------HNDLDHLEQLLQSSPK--SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVH 342 (570)
T ss_pred hhcCC---cceeec-------cCCHHHHHHHHHhCCC--CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeeehhh
Confidence 88887 444443 3389999999987643 46889999999999999999999999999999999999998
Q ss_pred ccccccCcccccc--ccC-CCCCCeeeeccccccCCCCcceEEEEeCchhHHhhh-cCCccccCCccccccccccCCCcc
Q 010125 290 AGSACICPEFRHF--IDG-VEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSL-STNPEYLKNKATESMQVVDYKDWQ 365 (517)
Q Consensus 290 g~~~~~~~~~~~~--~~g-~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~~~~ 365 (517)
+.+.+-. ..... -+| +.++|.|+...-|.++. .|..+. ....+.+.+ +..+++++..
T Consensus 343 AVGlYG~-rGaGvgerdGvm~kvDiIsGTLgKafGc---VGGYIA-at~~LvDmiRSyAaGFIFTT-------------- 403 (570)
T KOG1360|consen 343 AVGLYGP-RGAGVGERDGVMHKVDIISGTLGKAFGC---VGGYIA-ATRKLVDMIRSYAAGFIFTT-------------- 403 (570)
T ss_pred hhccccC-CCCCccccCCcchhhhhcccchhhhccc---ccceeh-hhhhHHHHHHHhcCceEEec--------------
Confidence 7665422 21111 123 46899999999998875 233222 233344444 3345566532
Q ss_pred ccCCCCCCc-hHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhh
Q 010125 366 ITLSRRFRS-LKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYV 443 (517)
Q Consensus 366 ~~~sr~~~a-l~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 443 (517)
+-+..- ..+..+.+.+ +.+| +...+.+.++.+++++.|.++ |+.++. ..+.||-.++...
T Consensus 404 ---SLPP~vl~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~-GiPVi~-~pSHIiPv~vgda------------ 465 (570)
T KOG1360|consen 404 ---SLPPMVLAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLMEL-GIPVIP-NPSHIIPVRVGDA------------ 465 (570)
T ss_pred ---CCChHHHHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHc-CCcccC-CCcceeeeeccCH------------
Confidence 222111 1334455554 3445 344566677889999999887 888874 3457777777543
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEe----eeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 444 NCLLSEEEQINEFNRELLESINASGKAYMT----HAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 444 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~----~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.++.++.+.|..+..+|+. +|+..|.-.+|+..+ |+.|.+-++.+++.+..+-.++
T Consensus 466 -----------~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPT-P~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 466 -----------ALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPT-PHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred -----------HHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCC-CCCCHHHHHHHHHHHHHHHHHc
Confidence 4577888888776666654 456678889999985 6668879999999988876654
No 276
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.65 E-value=1e-13 Score=142.79 Aligned_cols=291 Identities=14% Similarity=0.093 Sum_probs=169.3
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
..+++.++.+++++..+.+ ..+++++|++||..|+..+|... | ++.+|......|-+..-+..
T Consensus 69 ~~~~~~~la~~l~~~~~~~---------~~~~~~sG~~a~~~A~~~a~~~~----g----~~~vi~~~~~~Hg~~~~~~~ 131 (377)
T PRK02936 69 TNSLQEEVASLLAENSAGD---------LVFFCNSGAEANEAALKLARKHT----G----KSKIVTFEQSFHGRTFGTMS 131 (377)
T ss_pred CCHHHHHHHHHHHhcCCCC---------EEEEeCCcHHHHHHHHHHHHHhc----C----CCeEEEECCCcCCCcHHhhh
Confidence 4677888888888876542 47899999999999999887531 1 23355555566766555554
Q ss_pred HcCCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc----ChhHHHHHHH
Q 010125 211 IVGIDV---------KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD----PLKPLCDVAK 277 (517)
Q Consensus 211 ~~G~g~---------~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id----pl~eI~~i~~ 277 (517)
..|... ..+..+|. -|+++|++.+.+++ .+|++....++.|.+. .+++|.++|+
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~------~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~ 198 (377)
T PRK02936 132 ATGQEKIKEGFGPLLPGFTHVPF-------NDIKALKEVMNEEV------AAVMLEVVQGEGGVIPADPAFLQEVQTLCK 198 (377)
T ss_pred ccCCccccccCCCCCCCceEeCC-------CCHHHHHHhccCCe------EEEEEecccCCCCCccCCHHHHHHHHHHHH
Confidence 443210 01122221 17899999886443 3677766666666653 3999999999
Q ss_pred HhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 278 QFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 278 ~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
+||+++++|.+|.++............++ ..|.+ .+.|.++..+..|+++.++ . +.+.+... ..
T Consensus 199 ~~~~~lI~DEv~~g~g~~g~~~~~~~~~~-~~di~--t~sK~l~~G~~ig~v~~~~-~-~~~~~~~~---~~-------- 262 (377)
T PRK02936 199 KFGALLIIDEVQTGIGRTGTLFAYEQFGL-DPDIV--TVAKGLGNGIPVGAMIGKK-E-LGTAFGPG---SH-------- 262 (377)
T ss_pred HcCCEEEEeccccCCCcCchhhHHHhhCC-CCcEE--EEcccccCCCccEEEEEcH-H-HHhhccCC---CC--------
Confidence 99999999999976432111000001122 34654 4799998666788877643 2 22233110 00
Q ss_pred cccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEecCCCc
Q 010125 358 VVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCHFAVVCFRVSPSPV 433 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~~~ 433 (517)
..+. .+......++.++++.+. .++.+++..++.+++++.|++ .+.+.-+ .+...++.+.+...
T Consensus 263 -----~~t~-~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~~-- 330 (377)
T PRK02936 263 -----GSTF-GGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNI-RGKGLMIGIECTEE-- 330 (377)
T ss_pred -----CCCC-CCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-eecceEEEEEecch--
Confidence 0011 111112223333333331 134556666777777777765 2322212 12333444444321
Q ss_pred chhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 434 LMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
...+.+.+.++|.+... .+..++|+++ +...++++|++++++|.++
T Consensus 331 -----------------------~~~~~~~l~~~gv~v~~----~g~~~lRi~p-~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 331 -----------------------VAPVIEQLREEGLLVLS----AGPNVIRLLP-PLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred -----------------------HHHHHHHHHHCCeEEec----CCCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 34567777788865533 2346899997 3456788999999999764
No 277
>PRK08354 putative aminotransferase; Provisional
Probab=99.65 E-value=5.1e-14 Score=140.99 Aligned_cols=170 Identities=13% Similarity=0.001 Sum_probs=116.6
Q ss_pred HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcc
Q 010125 108 GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGR 187 (517)
Q Consensus 108 ~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~ 187 (517)
..+.+.+.+.+... ..|. .... +.+++++.+|. .+++|+|+++++..++... .
T Consensus 23 ~~~~~a~~~~~~~~-~~yp---~~~~----l~~~ia~~~~~----------~I~vt~G~~~al~~~~~~~-~-------- 75 (311)
T PRK08354 23 EWLDEMFERAKEIS-GRYT---YYEW----LEEEFSKLFGE----------PIVITAGITEALYLIGILA-L-------- 75 (311)
T ss_pred HHHHHHHHHHHHHh-hcCC---ChHH----HHHHHHHHHCC----------CEEECCCHHHHHHHHHHhh-C--------
Confidence 45556665544322 2343 2233 45677777762 5789999999876544221 1
Q ss_pred cCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc
Q 010125 188 ENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD 267 (517)
Q Consensus 188 ~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id 267 (517)
+++.|++.+++|..+.++++.+|+ +++.++ +|++.|++++++ + .+++++.++||||.+-
T Consensus 76 ---~gd~vlv~~P~y~~~~~~~~~~g~---~~~~~~--------~d~~~l~~~~~~-~------~~vi~~~P~NPTG~~~ 134 (311)
T PRK08354 76 ---RDRKVIIPRHTYGEYERVARFFAA---RIIKGP--------NDPEKLEELVER-N------SVVFFCNPNNPDGKFY 134 (311)
T ss_pred ---CCCeEEEeCCCcHHHHHHHHHcCC---EEeecC--------CCHHHHHHhhcC-C------CEEEEecCCCCCCCcc
Confidence 455688889999999999999999 776543 578888887752 1 2677889999999986
Q ss_pred C---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEE
Q 010125 268 P---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWV 331 (517)
Q Consensus 268 p---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~ 331 (517)
+ +++|+++|++||+|+++|.+|+.+.... .. .. ..--.++-++.|.++ ....+|+++.
T Consensus 135 ~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~---~~-~~--~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 135 NFKELKPLLDAVEDRNALLILDEAFIDFVKKP---ES-PE--GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CHHHHHHHHHHhhhcCcEEEEeCcchhccccc---cc-cC--CCcEEEEeccHhhcCCccceeeeeee
Confidence 5 6777888899999999999997765321 11 01 111245567999998 5577888876
No 278
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.65 E-value=3.3e-14 Score=138.82 Aligned_cols=256 Identities=12% Similarity=0.074 Sum_probs=174.0
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEE---eCCC
Q 010125 124 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVY---GSDQ 200 (517)
Q Consensus 124 ~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~---~s~~ 200 (517)
-|....-..++|..+++...+|||.+... +=..+|+.||+.+..+..+ |++.|+ .+.-
T Consensus 63 yYgGce~VD~vE~laierak~LFga~~an--------VQPhSGs~AN~av~~All~-----------pGDtimgm~l~~G 123 (413)
T COG0112 63 YYGGCEYVDEVEELAIERAKKLFGAEYAN--------VQPHSGSQANQAVYLALLQ-----------PGDTIMGLDLSHG 123 (413)
T ss_pred ccCCCeeHHHHHHHHHHHHHHHhCCCccc--------cCCCCchHHHHHHHHHHcC-----------CCCeEecccCCCC
Confidence 44555678899999999999999987542 4456789999877776654 455554 3444
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhC
Q 010125 201 THCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFG 280 (517)
Q Consensus 201 ~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~g 280 (517)
.|.+.-.-....|.- -+++..|+|+ +++.+|.|++++.+.+.+ |.+|++ |.+..--.-|++++.+||++.|
T Consensus 124 GHltHg~~v~~sG~~-~~~v~Y~vd~-et~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~VG 194 (413)
T COG0112 124 GHLTHGSPVNFSGKL-FNVVSYGVDP-ETGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEVG 194 (413)
T ss_pred CcccCCCCCCcccee-EEeEeccccc-ccCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHhC
Confidence 565554333344431 1667777875 368999999999988764 656554 4455556689999999999999
Q ss_pred CeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 281 IWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 281 i~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
.+|.+|.||-.+....-.+..- ++.||++|.+.||+|..|. .|++++++.+... .+... ++.
T Consensus 195 A~L~~DmAHiaGLVA~G~~p~P---~~~AdvVTtTTHKTlrGPr-GG~Il~~~eel~k-kin~a---VFP---------- 256 (413)
T COG0112 195 AYLMVDMAHVAGLIAGGVHPNP---LPHADVVTTTTHKTLRGPR-GGIILTNDEELAK-KINSA---VFP---------- 256 (413)
T ss_pred ceEEehHHHHHHHHhcccCCCC---CCccceEeCCcccCCCCCC-ceEEEeccHHHHH-Hhhhh---cCC----------
Confidence 9999999997776654444332 4589999999999999985 6777777744432 22110 111
Q ss_pred CCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCeeEEEEEecC
Q 010125 361 YKDWQITLSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP-CHFAVVCFRVSP 430 (517)
Q Consensus 361 ~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~-~~~~~v~f~~~~ 430 (517)
.++++-.. ...+...+++....-+|++..++..++|+.|++.|.+. |+.++.. .+..++...+.+
T Consensus 257 ----g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~ 323 (413)
T COG0112 257 ----GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRS 323 (413)
T ss_pred ----ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEccc
Confidence 11222111 11233445555556788899999999999999999986 9999853 334455555443
No 279
>PLN02397 aspartate transaminase
Probab=99.65 E-value=2.4e-13 Score=141.80 Aligned_cols=323 Identities=11% Similarity=0.042 Sum_probs=192.9
Q ss_pred HHHHHHHhccccc-ccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCce--EEcCCch--HHHHHHHHHHHHHHHH
Q 010125 109 FLGEMLSSGFNIV-GFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGG--VIQGTTC--EAILCTLTAARDRVLN 183 (517)
Q Consensus 109 ~~~~~l~~~~n~~-~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g--~~t~ggt--~a~~~al~~ar~~~~~ 183 (517)
.+.+.+...++.+ ...|....+..++.+.+++|+.+..+.+... ... .-+.+|+ .+...++....+
T Consensus 70 ~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-----~~i~~~~i~~g~Ga~~l~~~~~~~~~---- 140 (423)
T PLN02397 70 VVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKE-----NRVATVQCLSGTGSLRLGAEFLARFY---- 140 (423)
T ss_pred HHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhc-----CeeEeeecccchHHHHHHHHHHHHhC----
Confidence 3444443332322 3468888899999999999986543221100 011 1123333 333333332211
Q ss_pred HhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcc
Q 010125 184 KIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAI 263 (517)
Q Consensus 184 ~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~ 263 (517)
+++.|++.+++|..+...++..|+ +++.+|+...+++.+|++.+++.+.+.+ .+..+++.+.++|||
T Consensus 141 -------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPT 207 (423)
T PLN02397 141 -------PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPT 207 (423)
T ss_pred -------CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCC
Confidence 566799999999999999999999 9999998322347899999998886431 123578888899999
Q ss_pred cccc---ChhHHHHHHHHhCCeEEcccccccccccCc--ccccc--ccCCCCCCe-eeeccccccC-CCCcceEEE--Ee
Q 010125 264 TAVD---PLKPLCDVAKQFGIWVHVDAAYAGSACICP--EFRHF--IDGVEGADS-FSLNAHKWFF-ATLDCCCLW--VK 332 (517)
Q Consensus 264 G~id---pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~--~~~~~--~~g~~~aDs-i~~~~hK~l~-~p~~~g~l~--~~ 332 (517)
|.+- .+++|+++|++||+|+++|.+|..+..... ..... +... .-.+ +..++.|.++ ..+.+|+++ ..
T Consensus 208 G~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vI~~~SfSK~~~~~G~RvG~~v~~~~ 286 (423)
T PLN02397 208 GVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVED-GHEILVAQSYAKNMGLYGERVGALSVVCK 286 (423)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhc-CCcEEEEEECcccCCCccccceEEEEEeC
Confidence 9984 577889999999999999999977754110 01111 1111 1124 4557999998 568899986 33
Q ss_pred CchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcH--------HHHHHHHHHHHHHHHHHH
Q 010125 333 DPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGV--------ANLRHFLRSHVNMAKLFE 404 (517)
Q Consensus 333 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~--------~g~~~~i~~~~~~a~~l~ 404 (517)
++............+.... ..+ ...+..+++...+.. +.++++.++..++++.+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~--------------~~~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~ 349 (423)
T PLN02397 287 SADVAVRVKSQLKLIARPM--------------YSN---PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLY 349 (423)
T ss_pred CHHHHHHHHHHHHHHHhcc--------------cCC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3332211110000000000 000 012233333333321 125667778888999999
Q ss_pred HHHhcCCC----eEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCE
Q 010125 405 RLVSGDKR----FEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGI 480 (517)
Q Consensus 405 ~~l~~~~~----~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~ 480 (517)
+.|+++ + ++++ .|+.++++|.-.+ ..+.++|.++..+++.+ .|
T Consensus 350 ~~L~~~-~~~~~~~~~-~p~gg~fl~~~l~---------------------------~~~~~~Ll~~~~V~v~~---~~- 396 (423)
T PLN02397 350 DALEAR-GSPGDWSHI-TKQIGMFSFTGLN---------------------------KEQVDRMTKEYHIYMTR---DG- 396 (423)
T ss_pred HHHHhc-CCCCCCCcc-cCCceEEEecCCC---------------------------HHHHHHHHHhCCEEECC---CC-
Confidence 999887 4 5543 4666666663211 12444554443344431 22
Q ss_pred eEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 481 YAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 481 ~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
|+++++ .+++++++++++|+++.+
T Consensus 397 ---Ri~~~~--~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 397 ---RISMAG--LSSKNVPYLADAIHAVVT 420 (423)
T ss_pred ---eEEEee--CCHHHHHHHHHHHHHHHh
Confidence 999853 577799999999998864
No 280
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.64 E-value=1.8e-13 Score=139.68 Aligned_cols=347 Identities=14% Similarity=0.119 Sum_probs=198.2
Q ss_pred ccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHH
Q 010125 95 NYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTL 174 (517)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al 174 (517)
-|.+....+.+ .++-..+... +-.....|..+|...++|+.+.+ ++|.+ ..+.|++||.|+..+.
T Consensus 46 v~IDLlSDS~T-~aMs~~q~a~-~~vGDd~Yagd~s~~~LE~~vAe----~lG~e---------~aV~v~sGTaAl~ll~ 110 (460)
T PRK13237 46 VYIDLLTDSGT-NAMSDRQWAG-MMIGDEAYAGSRNFYHLEETVQE----YYGFK---------HVVPTHQGRGAENLLS 110 (460)
T ss_pred EEEECcccCCc-hhccHHHHHH-HhhcchhhcCCCcHHHHHHHHHH----HHCCC---------eEEEeCCHHHHHHHHH
Confidence 47777755544 2222221222 22233478899999999987555 55655 4689999999987643
Q ss_pred HHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHH-HHHcCCCCCCEEEEecC--------CCCCcccCHHHHHHHHHHhH
Q 010125 175 TAARDRVLNKIGRENISKLIVYGSDQTHCALQKA-AQIVGIDVKNFRAIKTT--------KSSSYGLSPDSLMAQINSDV 245 (517)
Q Consensus 175 ~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ka-a~~~G~g~~~v~~vp~d--------~~~~~~~d~~~Le~~i~~~~ 245 (517)
.... . ++++| +...|+.-.++ +...|. .++-+..+ ...+|.||++.|+++|++..
T Consensus 111 ~l~v---------~--pGd~V--p~n~~f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~ 174 (460)
T PRK13237 111 RIAI---------K--PGQYV--PGNMYFTTTRYHQELNGG---IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVG 174 (460)
T ss_pred HhCC---------C--CcCEE--CCccchHhhHHHHHhCCc---EEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 2111 1 44544 66778877776 566666 44444311 11358999999999998543
Q ss_pred hcCCcceEEEeeccCCcc-cc---ccChhHHHHHHHHhCCeEEcccccccccc-cCc----cccccc-----c-CCCCCC
Q 010125 246 EVGLIPLFLCATIGTTAI-TA---VDPLKPLCDVAKQFGIWVHVDAAYAGSAC-ICP----EFRHFI-----D-GVEGAD 310 (517)
Q Consensus 246 ~~g~~p~~vv~t~gtt~~-G~---idpl~eI~~i~~~~gi~lhvDaA~g~~~~-~~~----~~~~~~-----~-g~~~aD 310 (517)
. ..+.+|+++..++.. |. .+++++|.++|++||+++|.|||+..... +.. .+...- . -...+|
T Consensus 175 ~--~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD 252 (460)
T PRK13237 175 A--ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYAD 252 (460)
T ss_pred C--CccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCc
Confidence 2 122245555556666 43 35789999999999999999999976532 221 121110 0 124799
Q ss_pred eeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHH
Q 010125 311 SFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLR 390 (517)
Q Consensus 311 si~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~ 390 (517)
.+++|+||.+.+|. .|++.++|++...+.-.....|-. ...++. -.+|...+++ ..+...-. .
T Consensus 253 ~~t~S~~K~~~~~~-GG~i~t~D~eL~~~~r~~~~~~eG--------~~tygg---~~grd~~alA--vgl~E~~~---~ 315 (460)
T PRK13237 253 GCTMSGKKDCLVNI-GGFLAMNDEELFDEAKELVVVYEG--------MPSYGG---MAGRDMEAMA--IGIEESVQ---Y 315 (460)
T ss_pred EEEEeCCCCCCCCC-ceEEEECCHHHHHHHHHhccccCC--------CcCCCC---hhhhHHHHHH--hHHHhhch---H
Confidence 99999999999875 688888888765543322221110 001110 0123333322 22222111 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEec---CCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-h
Q 010125 391 HFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVS---PSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-A 466 (517)
Q Consensus 391 ~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~ 466 (517)
+.+++....++||.+.|.+. |+.++.+....-|..... |. + ... .--.+.|...|. +
T Consensus 316 ~y~~~ri~~~~~l~~~L~~~-Gvpv~~p~ggH~v~vda~~~lph-~-------------~~~----~~p~~al~~~ly~~ 376 (460)
T PRK13237 316 EYIEHRVGQVRYLGEKLLAA-GVPIVEPVGGHAVFLDARRFLPH-L-------------PQD----QFPAQALAAELYIE 376 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCceecCCCceEEEEEhHHhCCC-C-------------Ccc----cChHHHHHHHHHHH
Confidence 66677888999999999886 888886544333322211 10 0 000 011233333332 3
Q ss_pred cCcEEEeeeeE-------C------CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 467 SGKAYMTHAVL-------G------GIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 467 ~g~~~~~~~~~-------~------g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.|+=.+....+ . .--.+|+++---.-|.+++|.+.+.|..+.++
T Consensus 377 ~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 377 SGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred hCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 34311111111 1 12478999843334667999999999888654
No 281
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.64 E-value=1.3e-13 Score=143.20 Aligned_cols=310 Identities=13% Similarity=0.069 Sum_probs=183.5
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCch
Q 010125 124 NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHC 203 (517)
Q Consensus 124 ~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~ 203 (517)
.|...++...+.+++++|+.+. +++++ .+++|+|+++++.. +..... ++..|++.+++|.
T Consensus 70 ~Y~p~~g~~~lr~aia~~~~~~-~~~~d-------~I~it~Ga~~al~~-l~~l~~-----------~gd~Vlv~~P~y~ 129 (402)
T TIGR03542 70 GYGPEQGYPFLREAIAENDYRG-RIDPE-------EIFISDGAKCDVFR-LQSLFG-----------SDNTVAVQDPVYP 129 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHHhc-CCCHH-------HEEECCCcHHHHHH-HHHhcC-----------CCCEEEEeCCCCc
Confidence 4666677888888888876432 45544 78999999888764 322211 4456888889999
Q ss_pred HHHHHHHHcCC-CC-------CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHH
Q 010125 204 ALQKAAQIVGI-DV-------KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPL 272 (517)
Q Consensus 204 s~~kaa~~~G~-g~-------~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI 272 (517)
.+..+++..|+ |. .+++.+|+++++++..|+.. . . .+.+|+++.++||||.+-+ +++|
T Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~---~--~------~~~~i~l~nP~NPTG~~~s~~~~~~l 198 (402)
T TIGR03542 130 AYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE---E--P------KIDIIYLCSPNNPTGTVLTKEQLKEL 198 (402)
T ss_pred chHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc---c--C------CceEEEEeCCCCCCCccCCHHHHHHH
Confidence 99999998887 11 15677787643334444321 0 1 1336777799999999866 8889
Q ss_pred HHHHHHhCCeEEcccccccccccCccccccccCCCC---CCeeeeccccccC-CCCcceEEEEeCchhHHhhh-cCCccc
Q 010125 273 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEG---ADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSL-STNPEY 347 (517)
Q Consensus 273 ~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~---aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~-~~~~~y 347 (517)
+++|++||+++++|.+|..+... +.....+..+.. .-.++.++.|.++ ....+|++++.+. ...... .....+
T Consensus 199 ~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~ 276 (402)
T TIGR03542 199 VDYANEHGSLILFDAAYSAFISD-PSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDW 276 (402)
T ss_pred HHHHHHcCeEEEEEchhhhhccC-CCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHH
Confidence 99999999999999999765421 111111111212 1244667999996 5578898887433 110000 000000
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG---VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVV 424 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v 424 (517)
..... ... .....+...++...+. ...+.+.++...++++++.+.|++. ++++..+...+.+
T Consensus 277 ~~~~~-----------~~~---~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~ 341 (402)
T TIGR03542 277 ERRQC-----------TKF---NGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVYGGEHAPYL 341 (402)
T ss_pred HHHhh-----------hcc---cCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCceeEE
Confidence 00000 000 0012222223333332 2334555666777888898999876 6776533345566
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeeeeEC--CEeEEEEEecCCCCcHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHAVLG--GIYAIRFATGATLTEKRHVVVAW 501 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--g~~~lR~~~~~~~t~~~di~~l~ 501 (517)
.+++.+. . ...++.+.+. +.|+...++..+. +..++|+++.. +++++++++
T Consensus 342 ~v~l~~~-~----------------------~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~---~~~~l~~~l 395 (402)
T TIGR03542 342 WVKTPEG-I----------------------SSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFG---KRENIVEAC 395 (402)
T ss_pred EEECCCC-C----------------------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC---CHHHHHHHH
Confidence 6666432 0 0234566665 4576655544432 35799999743 567899888
Q ss_pred HHHHHH
Q 010125 502 TVVQQH 507 (517)
Q Consensus 502 ~~l~~~ 507 (517)
+.|+++
T Consensus 396 ~~l~~~ 401 (402)
T TIGR03542 396 ERIKEA 401 (402)
T ss_pred HHHHhh
Confidence 888654
No 282
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.64 E-value=2.9e-13 Score=139.98 Aligned_cols=298 Identities=14% Similarity=0.088 Sum_probs=162.3
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCC
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGI 214 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~ 214 (517)
..++.+.|+++.+.+ ..++++|||+||..|+.++|.....+ |..+ +..+|......|-+..-+....|.
T Consensus 75 ~~~la~~l~~~~~~~---------~v~~~~sGseA~~~al~~ar~~~~~~-G~~~-r~~vi~~~~~yhg~~~~~~~~~~~ 143 (389)
T PRK01278 75 QERLAERLVENSFAD---------KVFFTNSGAEAVECAIKTARRYHYGK-GHPE-RYRIITFEGAFHGRTLATIAAGGQ 143 (389)
T ss_pred HHHHHHHHHhhCCCC---------EEEEcCCcHHHHHHHHHHHHHHHHhc-CCCC-CCEEEEECCCcCCCcHHHHhccCC
Confidence 344556666665432 57999999999999999998753221 2110 123444444445443333333222
Q ss_pred CCCCEEE---EecCCCCCcc----cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc----cChhHHHHHHHHhCCeE
Q 010125 215 DVKNFRA---IKTTKSSSYG----LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV----DPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 215 g~~~v~~---vp~d~~~~~~----~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i----dpl~eI~~i~~~~gi~l 283 (517)
.... .|..+ ++. .|+++|++++++++ .+|+++...+++|.+ +.+++|.++|++||+++
T Consensus 144 ---~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~~------~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~l 212 (389)
T PRK01278 144 ---EKYLEGFGPLVP--GFDQVPFGDIEALKAAITPNT------AAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLL 212 (389)
T ss_pred ---hhhcccCCCCCC--CceEeCCCCHHHHHHhhCCCe------EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 1111 11111 112 58999999986533 366777666666733 57999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCC
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKD 363 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 363 (517)
++|++|.++.....-......++ ..|.+ ++.|.++..+..|+++.+++ +.+.+.... . .
T Consensus 213 I~DEv~~g~g~~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~~--~~~~~~~~~----~------------~ 271 (389)
T PRK01278 213 IFDEVQCGMGRTGKLFAHEWAGV-TPDIM--AVAKGIGGGFPLGACLATEE--AAKGMTPGT----H------------G 271 (389)
T ss_pred EEeccccCCCcCCcceeecccCC-CCCEE--EEehhccCCcceEEEEEcHH--HHhccCCCC----C------------C
Confidence 99999986533221111001122 35654 56799986677888887643 222221100 0 0
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCe-EEecCCCeeEEEEEecCCCcchhhh
Q 010125 364 WQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRF-EIVFPCHFAVVCFRVSPSPVLMDKL 438 (517)
Q Consensus 364 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~-~l~~~~~~~~v~f~~~~~~~~~~~~ 438 (517)
.++ ++.......+.++++.+-.+. ..++..++.+++++.+++ .+++ ..+ .+...++.+.+...
T Consensus 272 ~t~-~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v-~g~G~~~~i~~~~~------- 339 (389)
T PRK01278 272 STY-GGNPLAMAVGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIEEV-RGKGLLLGLKCVVP------- 339 (389)
T ss_pred CCC-CccHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCceeeE-ecccEEEEEEEecC-------
Confidence 011 111112223333454442222 334455555666655543 3322 111 12222333333211
Q ss_pred hhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 439 KTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
..++.+.|.++|+...+. +..++|+++. ...++++|++++++|.++.++
T Consensus 340 ------------------~~~~~~~l~~~GV~~~p~----~~~~lR~~p~-~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 340 ------------------NRDLVQALRDEGLLTVGA----GDNVVRLLPP-LIITEEEIDEALERLERAAES 388 (389)
T ss_pred ------------------HHHHHHHHHHCCeEEeec----CCCEEEEeCC-cccCHHHHHHHHHHHHHHHHh
Confidence 246677777788754332 3468999973 446788999999999887654
No 283
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.63 E-value=3.2e-13 Score=139.99 Aligned_cols=301 Identities=12% Similarity=0.068 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
..+..++.++++++.|.+ ..++++||++|+..|+.+++...-+ .+.+ ...++......|-....+...
T Consensus 80 ~~~~~~la~~l~~~~~~~---------~v~~~~gg~eA~~~al~~a~~~~~~-~~~~--~~~ii~~~~~yhg~~~~~~~~ 147 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD---------KVFFCNSGAEANEAAIKLARKYGHK-KGIE--KPEIITAENSFHGRTLATLSA 147 (396)
T ss_pred CHHHHHHHHHHHhhcCCC---------EEEECCCcHHHHHHHHHHHHHHhcc-cCCC--CCeEEEECCCcCcccHHHHHh
Confidence 556677778888887653 5799999999999999988764210 0100 123444444455333333333
Q ss_pred cCCCCCCEE---EEecCCCCCc----ccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc-c---cChhHHHHHHHHhC
Q 010125 212 VGIDVKNFR---AIKTTKSSSY----GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA-V---DPLKPLCDVAKQFG 280 (517)
Q Consensus 212 ~G~g~~~v~---~vp~d~~~~~----~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~-i---dpl~eI~~i~~~~g 280 (517)
.+. ... ..|... +. .-|+++|++++.++ +.+|+++...+++|. + +.+++|.++|++||
T Consensus 148 ~~~---~~~~~~~~~~~~--~~~~~~~~d~~~l~~~i~~~------~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~ 216 (396)
T PRK02627 148 TGQ---PKYQEGFEPLVE--GFIYVPFNDIEALKAAITDK------TAAVMLEPIQGEGGVNPADKEYLQALRELCDENG 216 (396)
T ss_pred cCC---ccccccCCCCCC--CceEeCCCCHHHHHHhcCCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcC
Confidence 332 111 112111 11 12899999998543 336777666777773 2 34899999999999
Q ss_pred CeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 281 IWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 281 i~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
+++++|++|+++............++ ..|.++ +.|.++.++..|+++.++. +.+.+... ...
T Consensus 217 ~~lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~~~~G~rig~~~~~~~--~~~~~~~~----~~~--------- 278 (396)
T PRK02627 217 ILLILDEVQTGMGRTGKLFAYQHYGI-EPDIMT--LAKGLGGGVPIGAVLAKEK--VADVFTPG----DHG--------- 278 (396)
T ss_pred CEEEEechhcCCCccCceeeehhcCC-CCCEEE--EcchhhCCcccEEEEEcHH--HHhccCCC----CCC---------
Confidence 99999999986532211000001122 346554 6799987778999887543 22222110 000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEecCCCcchh
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCHFAVVCFRVSPSPVLMD 436 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~~~~~~ 436 (517)
. ++ +........+..+++.+.. .+..++..++.+++++.|++ .|.+..+ .....++.+.+...
T Consensus 279 -~--t~-~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~~----- 345 (396)
T PRK02627 279 -S--TF-GGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIELDRP----- 345 (396)
T ss_pred -C--CC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEecCc-----
Confidence 0 10 1111122223333433322 23455556666666666544 3222222 22334455555211
Q ss_pred hhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 437 KLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
..++.+++.++|..+... +..++|+++ +...+++++++++++|.++.+++
T Consensus 346 --------------------~~~~~~~l~~~Gv~v~~~----~~~~lRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 346 --------------------AAEIVKKALEKGLLINVT----GDNVLRLLP-PLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred --------------------HHHHHHHHHHCCeEEeec----CCCEEEEEC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 356777777788654332 236799987 34567889999999999887654
No 284
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.63 E-value=7.3e-14 Score=142.31 Aligned_cols=237 Identities=17% Similarity=0.247 Sum_probs=161.9
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
...|....+|+. ++.+-|.. .++++++|..|+..++.+... +++.|+++...+...
T Consensus 52 ~gnPt~~~le~~----la~Le~g~---------~a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t 107 (386)
T PF01053_consen 52 YGNPTVRALEQR----LAALEGGE---------DALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGT 107 (386)
T ss_dssp TC-HHHHHHHHH----HHHHHT-S---------EEEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHH
T ss_pred cccccHHHHHHH----HHHhhccc---------ceeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcc
Confidence 456777777765 55665543 568889998888777665533 455677777777665
Q ss_pred HHHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhC-
Q 010125 206 QKAA----QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFG- 280 (517)
Q Consensus 206 ~kaa----~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~g- 280 (517)
.+.+ ...|+ ++..++. -|+++|+++++++++ +|.+..++|++..+-||++|+++|+++|
T Consensus 108 ~~~~~~~l~~~gv---~v~~~d~-------~d~~~l~~~l~~~t~------~v~~EspsNP~l~v~Dl~~i~~~a~~~g~ 171 (386)
T PF01053_consen 108 YRLLEELLPRFGV---EVTFVDP-------TDLEALEAALRPNTK------LVFLESPSNPTLEVPDLEAIAKLAKEHGD 171 (386)
T ss_dssp HHHHHHCHHHTTS---EEEEEST-------TSHHHHHHHHCTTEE------EEEEESSBTTTTB---HHHHHHHHHHTTT
T ss_pred hhhhhhhhcccCc---EEEEeCc-------hhHHHHHhhccccce------EEEEEcCCCcccccccHHHHHHHHHHhCC
Confidence 5444 44688 7877753 389999999998665 8999999999999999999999999999
Q ss_pred CeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC--CcceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 281 IWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT--LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 281 i~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
++++||..++.+...-| +.. +||.+.-|..|++++. .-+|++.+++...+...+.....
T Consensus 172 ~~~vVDnT~atp~~~~p-L~~------GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~------------ 232 (386)
T PF01053_consen 172 ILVVVDNTFATPYNQNP-LEL------GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR------------ 232 (386)
T ss_dssp -EEEEECTTTHTTTC-G-GGG------T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH------------
T ss_pred ceEEeeccccceeeecc-CcC------CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh------------
Confidence 99999999988754433 221 7999999999999743 22677777763333222211100
Q ss_pred ccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EecC-----C-----------Ce
Q 010125 359 VDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFE-IVFP-----C-----------HF 421 (517)
Q Consensus 359 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-l~~~-----~-----------~~ 421 (517)
..+-...+...|..++ |.+.+.-+++++.++|..+.+.|++.|.++ |..| | ..
T Consensus 233 --------~~G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~g 302 (386)
T PF01053_consen 233 --------LLGATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGG 302 (386)
T ss_dssp --------HHT-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCT
T ss_pred --------hcCccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccC
Confidence 0111235566777766 678889999999999999999999999986 4333 1 24
Q ss_pred eEEEEEecCC
Q 010125 422 AVVCFRVSPS 431 (517)
Q Consensus 422 ~~v~f~~~~~ 431 (517)
++++|.+...
T Consensus 303 gl~sf~l~~~ 312 (386)
T PF01053_consen 303 GLLSFELKGG 312 (386)
T ss_dssp SEEEEEESSH
T ss_pred ceeEEEeccc
Confidence 6889988764
No 285
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.63 E-value=5.3e-14 Score=133.32 Aligned_cols=311 Identities=16% Similarity=0.120 Sum_probs=216.1
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHH-HHHHHHHHHHHHhcccCCCCeEEEeCCCCc-----hH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILC-TLTAARDRVLNKIGRENISKLIVYGSDQTH-----CA 204 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~-al~~ar~~~~~~~g~~~~~~~~v~~s~~~H-----~s 204 (517)
-..+-..+.+.++.++|...+ +.+++.+.| .|+. .|.++... ..+..|++|+-.- |.
T Consensus 74 W~~lp~~lgdklApLiGA~~~-------Evvv~dtts-~nl~k~L~aalr~---------~~~r~vIv~E~~~fpTdly~ 136 (407)
T COG3844 74 WFDLPERLGDKLAPLIGARAG-------EVVVTDTTS-INLFKVLAAALRP---------QEGRRVIVSEGDNFPTDLYI 136 (407)
T ss_pred hhhchhHHHHHhhhhhcCCCC-------ceEEeCCcc-hHHHHHHHHHhcc---------CCCceEEeecCCCCCcchhh
Confidence 345667788999999999865 566666554 5544 44444322 0234466665432 44
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 205 LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 205 ~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
.+..++++|+|.+ + .+.+.+++++++++++++ +|+.+..+.-||..-++.+|.+++|++|+.+.
T Consensus 137 a~g~~~~~~~~~~-~---------~~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~~galv~ 200 (407)
T COG3844 137 AEGLADLLGIGYD-L---------EGVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQHGALVG 200 (407)
T ss_pred hcchhhhhccccc-c---------eeeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHhcCceEE
Confidence 5566788887521 1 246678899999999875 88999999999999999999999999999999
Q ss_pred cccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCcccccc-cccc--
Q 010125 285 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESM-QVVD-- 360 (517)
Q Consensus 285 vDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~-~~~~-- 360 (517)
-|=||+.+.++.+-+.. ++|+-+++.||+|+ .|-+.+++++.++.. .........|+.....-.. ..+.
T Consensus 201 wDLAHsaGavp~~Lh~~------gaDfaigcsyKYLNgGPGapa~l~v~~~h~-e~~~~~lsgW~gha~pf~m~~~y~p~ 273 (407)
T COG3844 201 WDLAHSAGAVPVDLHAA------GADFAIGCSYKYLNGGPGAPAGLFVAPRHR-ERSWPPLSGWWGHARPFAMEEVYAPG 273 (407)
T ss_pred eehhcccCCcceeeccc------CCCeeeeeeceeccCCCCCceeEEeccccc-cccccccccccCCCCcchhhhccCcC
Confidence 99999999987765543 89999999999996 566677788866543 2233444455543221000 0000
Q ss_pred CCCccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEecC----CCeeEEEEEecCC
Q 010125 361 YKDWQITLSRR--FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD-K--RFEIVFP----CHFAVVCFRVSPS 431 (517)
Q Consensus 361 ~~~~~~~~sr~--~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~-~--~~~l~~~----~~~~~v~f~~~~~ 431 (517)
.+-..+.++.. .....+-.+|..+..-++.+..++...++.+|.+.++.. + ++++..| ...+.|+|....
T Consensus 274 ~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~- 352 (407)
T COG3844 274 PGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH- 352 (407)
T ss_pred ccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc-
Confidence 01111112211 122355566777777789999999999999999999753 3 5777754 346778887753
Q ss_pred CcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 432 PVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
..++.+.|.++|++- .+.....+|+.++-.+++-+||=.+++.|.++.+++
T Consensus 353 -------------------------~~~V~qaLi~rGVig----D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 353 -------------------------GYQVMQALIDRGVIG----DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred -------------------------HHHHHHHHHHcCccc----cccCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 256667777889752 345567899999888999999999999999987764
No 286
>PLN02624 ornithine-delta-aminotransferase
Probab=99.63 E-value=9.3e-13 Score=138.94 Aligned_cols=310 Identities=11% Similarity=0.018 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
....++.+.|++++|++ ..+|+++|++||..|+..||.....+.|.......+|..+..-|-...-+..+.
T Consensus 117 ~~~~~la~~L~~~~~~~---------~~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~ 187 (474)
T PLN02624 117 DKFPEFAEYLTSMFGYD---------MVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMS 187 (474)
T ss_pred HHHHHHHHHHHhhcCCC---------eEEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcC
Confidence 33444556666666653 468899999999999999987532221211001234444433443322222222
Q ss_pred CCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHh
Q 010125 213 GID---------VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQF 279 (517)
Q Consensus 213 G~g---------~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~ 279 (517)
|-. ...+..+|. -|++.|++.++.. +....+|++....+++|.+-| +++|.++|++|
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~---~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~ 257 (474)
T PLN02624 188 CDNEATRGFGPLLPGHLKVDF-------GDLDALEKIFEED---GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKH 257 (474)
T ss_pred CCccccccCCCCCCCceEeCC-------CCHHHHHHHHHhC---CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 210 012233332 1789999988632 233557888888889999877 99999999999
Q ss_pred CCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 280 GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 280 gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
|+++++|++|.|+......+.....++ ..|.+++ .|.++.+ +.+|.++.+++ .. ..+.. ....
T Consensus 258 gillI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~l--sK~lggG~~pigav~~~~~-i~-~~~~~--~~~~--------- 321 (474)
T PLN02624 258 NVLMIADEIQTGLARTGKMLACDWEEV-RPDVVIL--GKALGGGVIPVSAVLADKD-VM-LCIKP--GEHG--------- 321 (474)
T ss_pred CCEEEEeccccCcCcCcchhhHHhcCC-CCCEEEe--cccccCCCCcceeeeecHH-HH-hHhcc--CCcC---------
Confidence 999999999986432111111111233 5687776 5998876 57888877542 22 22211 0000
Q ss_pred ccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCCCeeEEEEEecCCCc
Q 010125 359 VDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKR-FEIVFPCHFAVVCFRVSPSPV 433 (517)
Q Consensus 359 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~-~~l~~~~~~~~v~f~~~~~~~ 433 (517)
.++ ++........-++++.+..++ +.++..++.++|++.|++ .+. +.-+ .+...++.+.+.....
T Consensus 322 -----~T~-~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~~ 391 (474)
T PLN02624 322 -----STF-GGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPKL 391 (474)
T ss_pred -----CCC-CCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCCc
Confidence 011 111122223333444433322 344555666666666654 332 2211 1233344444432100
Q ss_pred chhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 434 LMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
. .....++.+.|.++|++. .+. +..+||++. ....+++||+++++.|+++.++-
T Consensus 392 ---------------~----~~~a~~~~~~L~e~GV~v-~p~---~~~~lR~~p-~l~~t~e~id~~l~~L~~~l~~~ 445 (474)
T PLN02624 392 ---------------G----PVSAYDVCLKLKERGLLA-KPT---HDTIIRLAP-PLSISEDELQECSKALSDVLEHD 445 (474)
T ss_pred ---------------C----hHHHHHHHHHHHhCCeEE-ecC---CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHH
Confidence 0 122456777788888654 332 356899997 45778899999999998887653
No 287
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.62 E-value=9.8e-13 Score=136.59 Aligned_cols=301 Identities=11% Similarity=0.052 Sum_probs=170.7
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC--
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG-- 213 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G-- 213 (517)
.++.+.|+++.+.+ ..+++++|++||..|+..+|.......+ ..++.+|.+....|-+...+..+.|
T Consensus 85 ~~l~~~l~~~~~~~---------~~~~~~sGseA~e~a~klar~~~~~~~~--~~~~~ii~~~~~~HG~~~~~~~~~~~~ 153 (403)
T PRK05093 85 LRLAKKLIDATFAE---------RVFFANSGAEANEAAFKLARRYACDRHG--PEKTEIIAFHNSFHGRTLFTVSVGGQP 153 (403)
T ss_pred HHHHHHHHhhCCCC---------EEEEeCchHHHHHHHHHHHHHHHhhcCC--CCCCeEEEEcCCcCCchhhhHhhcCCh
Confidence 35556666665542 4689999999999999999876432111 1134566666677876554444322
Q ss_pred -----CC--CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhCCe
Q 010125 214 -----ID--VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIW 282 (517)
Q Consensus 214 -----~g--~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~gi~ 282 (517)
++ ...++.+|. -|++.+++.+.+++ .+|++...+...|.+.| +++|.++|++||++
T Consensus 154 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~------aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~ 220 (403)
T PRK05093 154 KYSDGFGPKPADITHVPF-------NDLAAVKAVIDDHT------CAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNAL 220 (403)
T ss_pred hhhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCCe------EEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 11 112333332 17899998886433 35666644443444433 99999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCC
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYK 362 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 362 (517)
+++|.+|.++............++ ..|.. ++.|.++..+..|+++.++. +.+.+... ...
T Consensus 221 lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~--s~sK~l~~G~rig~vv~~~~--i~~~l~~~---~~~------------ 280 (403)
T PRK05093 221 LIFDEVQTGMGRTGDLFAYMHYGV-TPDIL--TSAKALGGGFPIGAMLTTAE--IASHFKVG---THG------------ 280 (403)
T ss_pred EEEechhhCCCCCccchhhhhcCC-CCCEE--EecccccCCcceEEEEEcHH--HHhhcCCC---CCC------------
Confidence 999999986532211100001112 35544 45799987677998887543 22222110 000
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC-CC-eeEEEEEecCCCcchhhhh
Q 010125 363 DWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFP-CH-FAVVCFRVSPSPVLMDKLK 439 (517)
Q Consensus 363 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~-~~-~~~v~f~~~~~~~~~~~~~ 439 (517)
.++ ++.+.....+..+++.+-. .++.++..++.+++.+.|+++. .+.++.. +. ..++.+.+.+..
T Consensus 281 -~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~~------- 348 (403)
T PRK05093 281 -STY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQY------- 348 (403)
T ss_pred -CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCcc-------
Confidence 011 1111122223333433321 3455677778888888887651 1111112 22 223344443220
Q ss_pred hhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 440 TKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.....++.+.+.++|..+. + .|..++|+++. ...++++|++++++|.++..++
T Consensus 349 --------------~~~~~~~~~~l~~~Gv~v~-~---~g~~~lRl~~~-~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 349 --------------KGRARDFLNAAAEEGVMVL-V---AGPDVLRFAPS-LVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred --------------hhHHHHHHHHHHHCCeEEe-c---CCCCEEEEeCC-CCCCHHHHHHHHHHHHHHHHHh
Confidence 1124567778888886543 2 24468999874 4557889999999999987665
No 288
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.62 E-value=8.7e-14 Score=139.67 Aligned_cols=340 Identities=13% Similarity=0.030 Sum_probs=207.7
Q ss_pred cceeCCCCCChH-HHHHHHHHhccccccc------ccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchH
Q 010125 96 YFAYFPSSGSIA-GFLGEMLSSGFNIVGF------NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCE 168 (517)
Q Consensus 96 ~~~~~~~~~~~~-~~~~~~l~~~~n~~~~------~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~ 168 (517)
-+.|.+++...| .++.++-.+.+|.+.. ...-++...++-+++.+.|+++++.|++. .-.++++|||.
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y-----~Vlfl~GggT~ 79 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY-----GVVFLQGGSSL 79 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC-----eEEEEeccHHH
Confidence 456777765555 4555555555554331 22346788889999999999999998753 23466667887
Q ss_pred HHHHHHHHHHHHHHHHhcccCCCCeEE-EeCCCCchH--HHHHHHHcCCCCCCEEEEecCCCCC--cccCHHHHHHHHHH
Q 010125 169 AILCTLTAARDRVLNKIGRENISKLIV-YGSDQTHCA--LQKAAQIVGIDVKNFRAIKTTKSSS--YGLSPDSLMAQINS 243 (517)
Q Consensus 169 a~~~al~~ar~~~~~~~g~~~~~~~~v-~~s~~~H~s--~~kaa~~~G~g~~~v~~vp~d~~~~--~~~d~~~Le~~i~~ 243 (517)
+.-++++..... ++-++ ++. ..+.+ +.+-|+.+| ++..+...+..+ ...+++.+ .+.+
T Consensus 80 ~~ea~~~Nll~~----------g~~~~~~~~-tG~fg~r~~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~--~~~~ 142 (364)
T PRK12462 80 QFSMIPMNFSRP----------GAAAPEYVT-TGYWSRKAIGEASRVA----AMRVVWDGAASGYRTLPSLAEL--DWDA 142 (364)
T ss_pred HHHHHHHHcCCC----------CCcEEEEEe-CCHHHHHHHHHHHhcC----CceEecCcCCCCCCcCCCHHHh--ccCC
Confidence 665555443221 22133 333 45544 333444444 244443211111 13355554 1222
Q ss_pred hHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC
Q 010125 244 DVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT 323 (517)
Q Consensus 244 ~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p 323 (517)
+ ..+|..|+..|.+|...| ++.+.++..++||+.-+.+...++ +++.|.+..+.+|.++ |
T Consensus 143 d------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid--------~~~~dvi~agsQKnlg-P 202 (364)
T PRK12462 143 R------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFD--------VEAYGMVYAHAQKNLG-P 202 (364)
T ss_pred C------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCC--------hHHccEEEeeccccCC-C
Confidence 2 237999999999999876 344447899999987654443332 2356999999999999 8
Q ss_pred CcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHH--HHHHHHHHHHHHHH
Q 010125 324 LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVA--NLRHFLRSHVNMAK 401 (517)
Q Consensus 324 ~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~--g~~~~i~~~~~~a~ 401 (517)
.|.++++++++..- +.-...+.|+.-... .+ ....+.+.--+....+-.+++.+-.+ |++++.+++.+.++
T Consensus 203 ~Gltvvivs~~al~-~~~~~~p~~ldy~~~-----~~-~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~ 275 (364)
T PRK12462 203 AGVTVAIIRRALLE-RVPDTLPPMLDFRTH-----VE-HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAA 275 (364)
T ss_pred CceEEEEECHHHHh-hccccCCchhhHHHH-----Hh-cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 89999999877542 221222333321100 00 00011100001223444455666566 99999999999999
Q ss_pred HHHHHHhcCCCeEEec-C---CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE
Q 010125 402 LFERLVSGDKRFEIVF-P---CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL 477 (517)
Q Consensus 402 ~l~~~l~~~~~~~l~~-~---~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 477 (517)
.+++.|.+.++|.... . .....|+|++... .+..++.+...+.|.+-+.+...
T Consensus 276 ~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~-----------------------~l~~~f~~~a~~~gl~~lkGhr~ 332 (364)
T PRK12462 276 MLYATLDALNEVIDCHAHRAARSTMNVAFRFRQP-----------------------RLDTLFKEQSTEAGFCGLSGHRS 332 (364)
T ss_pred HHHHHHHhCCCcccCCCChhhcCcceEEEEcCCH-----------------------HHHHHHHHHHHHCCCccccCCcc
Confidence 9999999988675432 1 2345689987542 45678888888899876555433
Q ss_pred CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 478 GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 478 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.+.+|+|+ ....+.+++++|++-+++..++
T Consensus 333 --vgg~Ras~-yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 333 --IGGIRASL-YNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred --cCceEEEc-CCCCCHHHHHHHHHHHHHHHHh
Confidence 33499998 4577888999999988887553
No 289
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.62 E-value=1.8e-12 Score=127.81 Aligned_cols=360 Identities=15% Similarity=0.105 Sum_probs=225.6
Q ss_pred CCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHH-HHHHh-----cccccccccccChhhHHHHHHHHHHH
Q 010125 69 NPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLG-EMLSS-----GFNIVGFNWISSPAATELENIVMDWL 142 (517)
Q Consensus 69 ~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~l~~-----~~n~~~~~~~~sp~~~~lE~~v~~~l 142 (517)
.+.+..++|+++++....|. ..+.|.|--.-+.-.|+++- .++.. +|.++...-+++.....+|. ...+
T Consensus 55 ~~~sE~e~l~~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfef--Qtlv 129 (450)
T COG0403 55 KPLSEYEALAELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEF--QTLV 129 (450)
T ss_pred CCCCHHHHHHHHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHH--HHHH
Confidence 35699999999999877665 45567664433445555555 44432 12333333334444444554 4789
Q ss_pred HHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH----HcCCCCCC
Q 010125 143 GQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ----IVGIDVKN 218 (517)
Q Consensus 143 ~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~----~~G~g~~~ 218 (517)
++|.|++-. +..+..++|.+--.++++-|... .++..++++...|+......+ -+|+ +
T Consensus 130 ~dLTGm~VA-------NASm~DeaTAaAEAm~ma~r~~k--------~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~---~ 191 (450)
T COG0403 130 ADLTGLDVA-------NASMLDEATAAAEAMLMAKRVTK--------KKRNKFLVPKDVHPQTLDVLRTRAEGLGI---E 191 (450)
T ss_pred HHHhCCCcc-------cchhhhhHHHHHHHHHHHHHhhc--------CcCceEEecCCCCHHHHHHHHhhcccCce---E
Confidence 999999976 56778888866654444444321 134679999999988666554 3345 6
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHH-hHhcCCcceEEEeeccCCccc-cccChhHHHHHHHHhCCeEEcccccccccccC
Q 010125 219 FRAIKTTKSSSYGLSPDSLMAQINS-DVEVGLIPLFLCATIGTTAIT-AVDPLKPLCDVAKQFGIWVHVDAAYAGSACIC 296 (517)
Q Consensus 219 v~~vp~d~~~~~~~d~~~Le~~i~~-~~~~g~~p~~vv~t~gtt~~G-~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~ 296 (517)
++.++.+ |.++|+++ .+ + .+.|++..+++ .| .+.++.+|.+.+|++|..++|=+ -.....+.
T Consensus 192 i~~~~~~-------d~~~l~~~-~~~~------~~gv~vQyP~~-~G~~~~d~~~l~~~~h~~~al~~v~a-DplaL~LL 255 (450)
T COG0403 192 IEVVDAD-------DLDDLESA-DDGD------VFGVLVQYPNT-FGIVEEDLRALIEAAHSAGALVIVAA-DPLALGLL 255 (450)
T ss_pred EEEeccc-------hhhhhhhc-cccC------eEEEEEecCCC-CCccchhHHHHHHHHhhcCCEEEEEe-chhHhhcc
Confidence 6666543 77888877 33 3 35899999986 46 77789999999999999877632 11111111
Q ss_pred ccccccccCCCCCCeeeeccccccC----CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccC----
Q 010125 297 PEFRHFIDGVEGADSFSLNAHKWFF----ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITL---- 368 (517)
Q Consensus 297 ~~~~~~~~g~~~aDsi~~~~hK~l~----~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~---- 368 (517)
... |--+||++..+.+-++. ....+|++.+|++. ....|+-|.+...+..+...|. .++|.
T Consensus 256 ~pP-----Ge~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~-----~R~mPGRlVG~S~D~~G~~A~r-LaLQTREQH 324 (450)
T COG0403 256 KPP-----GEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF-----KRQMPGRLVGVSVDAAGKRAFR-LALQTREQH 324 (450)
T ss_pred CCc-----cccCCceEEecCcccCCCcCCCCcceeeeeEhHhH-----hhcCCCceeeeeecCCCCchhh-hhHHHHHHH
Confidence 111 12289999999987652 22348899887663 2334555554433333322221 22222
Q ss_pred CCCCCc----------hHHHH--HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCCCeeEEEEEecCCCcch
Q 010125 369 SRRFRS----------LKLWF--VIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPCHFAVVCFRVSPSPVLM 435 (517)
Q Consensus 369 sr~~~a----------l~~~~--~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~~~~~v~f~~~~~~~~~ 435 (517)
-||-.| +++.+ .+-.+|.+|++++.++.+.++.++++.|++.. +++++.+..+..+++++..
T Consensus 325 IRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~----- 399 (450)
T COG0403 325 IRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPE----- 399 (450)
T ss_pred HhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecch-----
Confidence 233222 12222 22346999999999999999999999999653 6888877777778887742
Q ss_pred hhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 436 DKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
..+..+.++....|.-. . .+.. ..+=+|+. -.++++||+.+++.+...
T Consensus 400 -------------------~~~~~l~~~~~~~G~~L-~--~~~~-~~~~ia~t-Et~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 400 -------------------EVAEALLAAAIAGGINL-R--RVDA-DTVLIALT-ETTTKEDIDALVAAFGGV 447 (450)
T ss_pred -------------------hHHHHHHHHHHhcCCce-e--eecC-CceEEEee-cccCHHHHHHHHHHHhhh
Confidence 23556666665566421 1 1221 14667775 467788999999888654
No 290
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.60 E-value=5.4e-13 Score=134.75 Aligned_cols=268 Identities=12% Similarity=0.028 Sum_probs=166.5
Q ss_pred HHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCC
Q 010125 138 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVK 217 (517)
Q Consensus 138 v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~ 217 (517)
+++.+++.+|.+ .+++|+|+++++..++.+ . +++.|++.++++..+..+++.+|+
T Consensus 54 Lr~~ia~~~~~~---------~I~it~Gs~~al~~~~~~--~-----------~gd~v~v~~P~y~~~~~~~~~~g~--- 108 (330)
T PRK05664 54 LEAAARAYYGAP---------QLLPVAGSQAAIQALPRL--R-----------APGRVGVLSPCYAEHAHAWRRAGH--- 108 (330)
T ss_pred HHHHHHHHhCCC---------CEEECcCHHHHHHHHHHc--c-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence 345566666642 589999999887654321 1 556788899999999999999999
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhCCeEEcccccccccc
Q 010125 218 NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVHVDAAYAGSAC 294 (517)
Q Consensus 218 ~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~gi~lhvDaA~g~~~~ 294 (517)
+++.||++ +++++++ .+ .+++.+.++||||.+-+ +++|+++|+++|+|+++|.+|..+.
T Consensus 109 ~~~~v~~~----------~~~~~~~-~~------~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~- 170 (330)
T PRK05664 109 QVRELDEA----------EVEAALD-SL------DVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNT- 170 (330)
T ss_pred eEEEechh----------hHhhhhc-CC------CEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCC-
Confidence 99988763 3445543 22 25777889999999865 6666777889999999999996442
Q ss_pred cCccccccccCCCCCC-eeeeccccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCccccCCCC
Q 010125 295 ICPEFRHFIDGVEGAD-SFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQITLSRR 371 (517)
Q Consensus 295 ~~~~~~~~~~g~~~aD-si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 371 (517)
..+..... ...-. .+.-+++|.++ ....+|+++.. +... +.+.. ...+ .
T Consensus 171 ~~~s~~~~---~~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~-~~~~~~~~~~-----------------~------ 222 (330)
T PRK05664 171 PQHSLAAC---AHRPGLIVLRSFGKFFGLAGARLGFVLAE-PALL-RALAELLGPW-----------------T------ 222 (330)
T ss_pred Cccccccc---ccCCCEEEEeeccccccCCCcceEEEEeC-HHHH-HHHHHhcCCC-----------------C------
Confidence 11111111 11112 45667999997 66888998874 3332 22211 1111 0
Q ss_pred CCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchH
Q 010125 372 FRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEE 450 (517)
Q Consensus 372 ~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~ 450 (517)
...+..+++...+. .+..++..++..+.++++.+.|++. +++.. ....+.+.++. +.
T Consensus 223 ~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~-~~------------------- 280 (330)
T PRK05664 223 VSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRT-ED------------------- 280 (330)
T ss_pred CCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEec-CC-------------------
Confidence 01122233333332 2334556677777889999999886 55321 11123333332 21
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 451 EQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 451 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
...+.+.|.+.|+.... +....++|++++. +.++.++++++|+++.++
T Consensus 281 ------~~~~~~~l~~~gi~v~~---f~~~~~iRis~~~---~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 281 ------AAALHEFLARRGILTRL---FEQPASLRFGLPA---DEADWARLDQALLAYRKE 328 (330)
T ss_pred ------HHHHHHHHHHCCeEEEE---CCCCCeEEEECCC---CHHHHHHHHHHHHHHHhh
Confidence 24566677778876532 2234689999853 456888888888776543
No 291
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.60 E-value=4e-14 Score=139.43 Aligned_cols=342 Identities=13% Similarity=0.079 Sum_probs=212.3
Q ss_pred CCCccceeCCC-CCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHH
Q 010125 92 QSPNYFAYFPS-SGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 170 (517)
Q Consensus 92 ~~p~~~~~~~~-~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 170 (517)
.+-+|+||-.+ ++..+..+..+-...+...... .--+..++.+++.+.+++++|.++. .+|..| -..|
T Consensus 142 gSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~--~e~G~~~~hkelE~l~A~f~g~e~a--------~vF~mG-f~TN 210 (519)
T KOG1357|consen 142 GSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSR--HEAGTTEEHKELEELVARFLGVEDA--------IVFSMG-FATN 210 (519)
T ss_pred cccccccccccCCcCChHHHHHHHHhcccccccc--hhcccHHHHHHHHHHHHHhcCCcce--------EEEecc-cccc
Confidence 45578887754 3444444433333233322211 1124567778888899999999864 333332 2122
Q ss_pred HHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCC-
Q 010125 171 LCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGL- 249 (517)
Q Consensus 171 ~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~- 249 (517)
-+.+-+... ++..|+-.+..|.|+.-.|++.|. .++....+ |+.+||+.|++....|.
T Consensus 211 s~~~p~l~~-----------~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkHN-------dm~~LEr~Lrd~I~~gqP 269 (519)
T KOG1357|consen 211 SMNIPSLLG-----------KGSLIISDELNHASLITGARLSGA---TTRVFRHN-------DMQGLERLLRDAIVYGQP 269 (519)
T ss_pred ccCcceeec-----------CCcceeeccccchheeccccccCc---eEEEEecC-------CHHHHHHHHHHHHhcCCC
Confidence 111111111 556677778899999999999999 89988764 78899999988776552
Q ss_pred ---cc---eEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCcccccc----ccCCCCCCeeeeccccc
Q 010125 250 ---IP---LFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF----IDGVEGADSFSLNAHKW 319 (517)
Q Consensus 250 ---~p---~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~----~~g~~~aDsi~~~~hK~ 319 (517)
+| ++|+.-.-.+.-|.++++.++.+++|||..+||.|+||.++++.. ..+.. -.+-+.+|.+...+.|.
T Consensus 270 ~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~-tGrgvce~~g~d~~dvDImMGtftKS 348 (519)
T KOG1357|consen 270 KTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGA-TGRGVCEYFGVDPEDVDIMMGTFTKS 348 (519)
T ss_pred CcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCC-CCcceeeccCCCchhheeecceehhh
Confidence 22 455555567789999999999999999999999999999887632 11111 11235788999999999
Q ss_pred cCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHh----cHHHHHHHHH
Q 010125 320 FFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNY----GVANLRHFLR 394 (517)
Q Consensus 320 l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~----g~~g~~~~i~ 394 (517)
+++ +|..+..++. +.+.+...+.+... ..+.+ .-+-....+++.+ |.+.-++.++
T Consensus 349 fga---~GGyiagsk~-lid~lrt~s~~~~y----------------at~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~ 408 (519)
T KOG1357|consen 349 FGA---AGGYIAGSKE-LIDYLRTPSPSALY----------------ATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIE 408 (519)
T ss_pred ccc---ccceecCcHH-HHhhhccCCCceee----------------cccCChHHHHHHHHHHHhhcCCCcccHHHHHHH
Confidence 875 4444443333 23333222222111 01111 1112233344443 4566788999
Q ss_pred HHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEee
Q 010125 395 SHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTH 474 (517)
Q Consensus 395 ~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 474 (517)
+..+++++++..+++. +|.+.+..++.++-.-+.++. .+..+.+.|.+++...+..
T Consensus 409 ~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~-----------------------k~~~f~r~~l~~nigvVvv 464 (519)
T KOG1357|consen 409 RLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA-----------------------KIVAFSREMLERNIGVVVV 464 (519)
T ss_pred HHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc-----------------------cccHHHHHHHhcCceEEEE
Confidence 9999999999999886 898887766666655444331 1234455555555533222
Q ss_pred ee---ECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 475 AV---LGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 475 ~~---~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.. .--....|+|... +.+.++++++++.+.+..+..
T Consensus 465 gfPatpl~e~r~R~c~Sa-~ht~e~ld~~l~~i~~~g~~~ 503 (519)
T KOG1357|consen 465 GFPATPLLESRARFCLSA-SHTKEDLDRALEVIDRVGDED 503 (519)
T ss_pred eCCCchHHHhHHHhhhcc-cccHHHHHHHHHHHhhhchhh
Confidence 11 1113457999854 556679999999999887543
No 292
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.60 E-value=7e-13 Score=134.33 Aligned_cols=274 Identities=12% Similarity=0.049 Sum_probs=172.9
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCC
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGID 215 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g 215 (517)
..+++++++.+|+++. ...++|+|+++++.. +..+. + ++. |++.++++..+..+++..|+
T Consensus 56 ~~L~~~ia~~~~~~~~------~~I~i~~Gs~e~i~~-l~~~~----~-------~g~-v~v~~P~y~~y~~~~~~~g~- 115 (339)
T PRK06959 56 DGLAACAARYYGAPDA------AHVLPVAGSQAAIRA-LPALL----P-------RGR-VGIAPLAYSEYAPAFARHGH- 115 (339)
T ss_pred HHHHHHHHHHhCCCCc------ccEEECcCHHHHHHH-HHHhc----C-------CCe-EEEcCCCcHHHHHHHHHCCC-
Confidence 4667889999999742 168899998888753 32221 1 344 55677999999999999999
Q ss_pred CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHH---HHHHhCCeEEcccccccc
Q 010125 216 VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCD---VAKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 216 ~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~---i~~~~gi~lhvDaA~g~~ 292 (517)
+++.+|.+. +.+. +.. .+++++.++||||.+-+.+++.+ .|++++.|+++|.+|..+
T Consensus 116 --~~~~v~~~~--------~~~~----~~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~ 175 (339)
T PRK06959 116 --RVVPLDEAA--------DTLP----AAL------THLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT 175 (339)
T ss_pred --EEEeecccc--------hhcc----ccC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence 888887652 1221 111 16788889999999976655555 466889999999999765
Q ss_pred cccCccccccccCCCCCC-eeeeccccccC-CCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCccccCC
Q 010125 293 ACICPEFRHFIDGVEGAD-SFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQITLS 369 (517)
Q Consensus 293 ~~~~~~~~~~~~g~~~aD-si~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~s 369 (517)
... +...... ..-. .+.-++.|.++ ....+|+++.. ++.. +.+.. ...+ .
T Consensus 176 ~~~-~s~~~~~---~~~~vi~l~SfSK~~gl~GlRiGy~v~~-~~li-~~l~~~~~~~-----------------~---- 228 (339)
T PRK06959 176 LPA-ASLAAHT---DRPGLVVLRSVGKFFGLAGVRAGFVLAA-PALL-AALRDALGAW-----------------T---- 228 (339)
T ss_pred CCc-ccchhcc---CCCCEEEEecChhhcCCcchheEEEecC-HHHH-HHHHHhcCCC-----------------C----
Confidence 321 1111111 1111 45667999997 55788988874 3332 22211 1111 1
Q ss_pred CCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccc
Q 010125 370 RRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLS 448 (517)
Q Consensus 370 r~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 448 (517)
...+...++...+. .+..++..++..+.++++.+.|++. ++++. +..+.+.++. +.
T Consensus 229 --vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~-~~----------------- 285 (339)
T PRK06959 229 --VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDD-PR----------------- 285 (339)
T ss_pred --CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeC-CC-----------------
Confidence 12233334444442 2344556677777889999999887 67654 2223333332 11
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 449 EEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 449 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
..++.+.|.++|+... . +....++|+++.. +.++.++++++|+++.+.+..
T Consensus 286 --------~~~l~~~l~~~GI~vr-~--~~~~~~lRisi~~---~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 286 --------AAALHAALARRGIWTR-Y--FAPPPSVRFGLPA---DEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred --------HHHHHHHHHhCCeEEE-E--CCCCCeEEEECCC---CHHHHHHHHHHHHHHHHHHhh
Confidence 2457777888887542 2 2334589999832 556999999999988776654
No 293
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.59 E-value=1.2e-12 Score=135.94 Aligned_cols=304 Identities=12% Similarity=0.029 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCC
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGI 214 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~ 214 (517)
..++.+.|+++.+.+ ..+|+++|++||..|+..||.....+ +.. ....+|.....-|-+..-+..+.|.
T Consensus 83 ~~~la~~l~~~~~~~---------~v~~~~sGseA~e~Alk~ar~~~~~~-~~~-~r~~ii~~~~~yHG~t~~~~~~~~~ 151 (406)
T PRK12381 83 VLRLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKYAHDR-YGS-HKSGIVAFKNAFHGRTLFTVSAGGQ 151 (406)
T ss_pred HHHHHHHHHhhCCCC---------eEEEcCCcHHHHHHHHHHHHHHHhhc-CCC-CCCeEEEECCCcCCcchhHHhhcCC
Confidence 344556666665432 57999999999999999998653211 110 1233455555566555444444442
Q ss_pred CC---------CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc-----ccChhHHHHHHHHhC
Q 010125 215 DV---------KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA-----VDPLKPLCDVAKQFG 280 (517)
Q Consensus 215 g~---------~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~-----idpl~eI~~i~~~~g 280 (517)
.. ..+..+| .-|+++|++.+.+++ .+|++. +..++|. .+.+++|.++|++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~------aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~ 217 (406)
T PRK12381 152 PKYSQDFAPLPPDIRHAA-------YNDLNSASALIDDQT------CAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHN 217 (406)
T ss_pred cccccCCCCCCCCeeEeC-------CCCHHHHHHhccCCe------eEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 10 0122222 237899998886432 355555 4444443 356899999999999
Q ss_pred CeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccccccc
Q 010125 281 IWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVD 360 (517)
Q Consensus 281 i~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 360 (517)
+++++|.+|.|+.....-+.....++ ..|.+ ++.|.++..+..|.++.++. +.+.+... ...
T Consensus 218 ~llI~DEv~tG~gr~G~~~~~~~~~v-~pDi~--t~sK~l~gG~~ig~~~~~~~--~~~~~~~~---~~~---------- 279 (406)
T PRK12381 218 ALLIFDEVQTGVGRTGELYAYMHYGV-TPDVL--TTAKALGGGFPIGAMLTTEK--CASVMTVG---THG---------- 279 (406)
T ss_pred CEEEEcchhhCCCCCcchhhhHhhCC-CCCEE--EehhhhhCCCceEEEEEcHH--HHhhcCCC---CCC----------
Confidence 99999999966532221111011123 35654 56799977778888887643 22233210 000
Q ss_pred CCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEEEEEecCCCcchhh
Q 010125 361 YKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFAVVCFRVSPSPVLMDK 437 (517)
Q Consensus 361 ~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~~v~f~~~~~~~~~~~ 437 (517)
.++ .+.......+.++++.+.. .+++++..++.+++.+.|+++. .+.++..+ ...++.+.+.+..
T Consensus 280 ---~t~-~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~~----- 347 (406)
T PRK12381 280 ---TTY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAEY----- 347 (406)
T ss_pred ---CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCch-----
Confidence 011 1112222333344444422 2466777788888888887651 12122121 1223344443210
Q ss_pred hhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Q 010125 438 LKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQSA 514 (517)
Q Consensus 438 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~~ 514 (517)
......+.+.+.++|.+... .+..++|+++. ...+++||+++++.|.++.+++.++
T Consensus 348 ----------------~~~~~~~~~~l~~~Gv~v~~----~g~~~lRl~p~-~~~t~~~i~~~~~~l~~~l~~~~~~ 403 (406)
T PRK12381 348 ----------------AGKAKQISQEAAKAGVMVLI----AGPNVVRFAPA-LNISEEEITTGLDRFARACERFVSR 403 (406)
T ss_pred ----------------hhHHHHHHHHHHHCCcEEee----CCCCEEEEeCC-ccCCHHHHHHHHHHHHHHHHHHHhc
Confidence 12345677888888976532 13458999984 4567889999999999998877543
No 294
>PRK07049 methionine gamma-lyase; Validated
Probab=99.58 E-value=1.6e-12 Score=135.26 Aligned_cols=225 Identities=13% Similarity=0.121 Sum_probs=153.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
..|....+|+. ++++.|.+ ..++++||+.|+..++.+..+ +++.|+++++.|....
T Consensus 81 ~~Pt~~~Le~~----lA~leg~~---------~~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~ 136 (427)
T PRK07049 81 NHPNSEIVEDR----LAVYEGAE---------SAALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTE 136 (427)
T ss_pred CCcCHHHHHHH----HHHHhCCC---------cEEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHH
Confidence 35666677765 55555533 468889999887766655433 5566888888887765
Q ss_pred HH----HHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHH----
Q 010125 207 KA----AQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQ---- 278 (517)
Q Consensus 207 ka----a~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~---- 278 (517)
.. +...|+ +++.++. ..|.++|+++|.+..++ ..+.+|++..++|++|.+-|+++|.++|++
T Consensus 137 ~~~~~~l~~~Gi---~~v~~~~------~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~ 206 (427)
T PRK07049 137 TLLAKTFRNFGV---GAVGFAD------GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEAR 206 (427)
T ss_pred HHHHHHHHhcCc---EEEEEeC------CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhc
Confidence 54 345677 7666652 25788898888654321 134578888999999999999999999988
Q ss_pred --hCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCC--CCcceEEEEeCchhHHhhhcCCccccCCcccc
Q 010125 279 --FGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFA--TLDCCCLWVKDPRALVSSLSTNPEYLKNKATE 354 (517)
Q Consensus 279 --~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~--p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~ 354 (517)
++++++||.+|.+.....+ . . .++|.+..+++|+++. ..-+|+++. +++. .+.+......
T Consensus 207 ~~~~~~vvvDety~~~~~~~p-l----~--~g~divv~S~SK~~gG~~glr~G~vv~-~~~l-~~~l~~~~~~------- 270 (427)
T PRK07049 207 QGHRPIIACDNTLLGPVFQKP-L----E--HGADLSVYSLTKYVGGHSDLVAGAVLG-RKAL-IRQVRALRSA------- 270 (427)
T ss_pred ccCCCEEEEECCccccccCCc-c----c--cCCCEEEEcCceeecCCCCcEEEEEEC-CHHH-HHHHHHHHHh-------
Confidence 8999999999876543221 1 1 1579999999999983 345666653 3332 2222111000
Q ss_pred ccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 010125 355 SMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIV 416 (517)
Q Consensus 355 ~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~ 416 (517)
.+........|++++.+ +.+..++++..++++.+.+.|++.|+++-+
T Consensus 271 -------------~g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v 317 (427)
T PRK07049 271 -------------IGTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEKL 317 (427)
T ss_pred -------------cCCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 11122456677776644 567888999999999999999999987543
No 295
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.56 E-value=4.6e-12 Score=130.35 Aligned_cols=294 Identities=14% Similarity=0.094 Sum_probs=167.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH
Q 010125 130 AATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA 209 (517)
Q Consensus 130 ~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa 209 (517)
....++.++.++++. .+.. -.+|++|||+||..|+..+|... + ++.+|......|-+...++
T Consensus 67 ~~~~~~~~la~~l~~---~~~~-------~~~~~~SGseA~~~Al~~ar~~~----~----~~~vv~~~~~yHg~~~~~~ 128 (375)
T PRK04260 67 YLNSLQEEVAQKLIG---DKDY-------LAFFCNSGAEANEAAIKIARKAT----G----KQEIITFQNSFHGRTFGSM 128 (375)
T ss_pred cCCHHHHHHHHHHhc---CcCC-------EEEEcCccHHHHHHHHHHHHHhc----C----CCeEEEECCCcCcccHHHH
Confidence 345566666665543 1211 36899999999999999997641 1 3345555667787776666
Q ss_pred HHcCCCCC------CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHh
Q 010125 210 QIVGIDVK------NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQF 279 (517)
Q Consensus 210 ~~~G~g~~------~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~ 279 (517)
...|.... .+..++... ..|+++|++.+.++ ..+|++....+++|.+-| +++|.++|++|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~----~~dl~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~ 198 (375)
T PRK04260 129 SATGQDKIKDGFGDGVPHFSYAI----FNDLNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQET 198 (375)
T ss_pred hccCCcccCCCCCCCCCCeEEeC----CCCHHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHc
Confidence 55543100 011111100 24889999888543 247777777888888754 89999999999
Q ss_pred CCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 280 GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 280 gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
|+++++|++|.++.....-......++ ..|.+ ++.|.++..+..|+++.++. +...+... .+.
T Consensus 199 ~~~~i~De~~~g~g~~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~~--~~~~~~~~-~~~----------- 261 (375)
T PRK04260 199 GILLIVDEVQTGMGRTGKLYAFEHYGI-EPDIF--TLAKGLANGVPVGAMLAKSS--LGGAFGYG-SHG----------- 261 (375)
T ss_pred CCEEEEechhhCCCcccchhhhHhhCC-CCCEE--EecccccCCcceEEEEEcHH--HHhhcCCC-CCC-----------
Confidence 999999999976432111111101223 35644 57999986677899988643 22222110 000
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCCeeEEEEEecCCCcch
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLV----SGDKRFEIVFPCHFAVVCFRVSPSPVLM 435 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l----~~~~~~~l~~~~~~~~v~f~~~~~~~~~ 435 (517)
.++ .+.......+..+++....+. .+++..+..+++++.+ .+.+.+.-+ .....++.+.+...
T Consensus 262 ----~t~-~~~~~~~~aa~a~l~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~~~~~~~---- 328 (375)
T PRK04260 262 ----STF-GGNKLSMAAASATLDIMLTAG---FLEQALENGNYLQEQLQKALQDKETVTTV-RGLGYMIGIETTAD---- 328 (375)
T ss_pred ----CCC-CcCHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhhCCCeeEE-eccceEEEEEecCc----
Confidence 011 111112233344444433333 3344444444444444 444322222 11333444444211
Q ss_pred hhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 436 DKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
..++.+++.++|....+. +...+|+++. ...+++||+++++.|+++
T Consensus 329 ---------------------~~~~~~~l~~~Gi~v~~~----~~~~lR~~~~-~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 329 ---------------------LSQLVEAARDKGLIVLTA----GTNVIRLLPP-LTLTKEEIEQGIAILSEV 374 (375)
T ss_pred ---------------------HHHHHHHHHhCCCEEecC----CCCEEEEcCC-CccCHHHHHHHHHHHHHh
Confidence 246777888889754322 3467999984 456688999999998765
No 296
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.55 E-value=4.3e-12 Score=130.98 Aligned_cols=308 Identities=12% Similarity=0.013 Sum_probs=181.3
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
..+.+.++.+++++..+.+ ..+|++|||+||..|+..+|....+ +.. .+..+|......|-+..-++.
T Consensus 76 ~~~~~~~la~~l~~~~~~~---------~v~f~~SGseA~e~Aik~ar~~~~~--~~~-~r~~ii~~~~~yHG~t~~~~~ 143 (395)
T PRK03715 76 YNEPMAKLAGLLTQHSCFD---------KVFFANSGAEANEGAIKLARKWGRK--HKN-GAYEIITFDHSFHGRTLATMS 143 (395)
T ss_pred cCHHHHHHHHHHhhccCCC---------EEEEeCCcHHHHHHHHHHHHHHhhc--cCC-CCcEEEEECCCcCCChHHHHh
Confidence 4567778888888764432 5799999999999999999864211 111 123456666677877777776
Q ss_pred HcCCCCCCEEEEecCCCCCc----ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhCCe
Q 010125 211 IVGIDVKNFRAIKTTKSSSY----GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIW 282 (517)
Q Consensus 211 ~~G~g~~~v~~vp~d~~~~~----~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~gi~ 282 (517)
..|.........|... ++ .-|+++|++.+.+.+ .+|++.......|.+-| +++|.++|++||++
T Consensus 144 ~s~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~~------aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~l 215 (395)
T PRK03715 144 ASGKPGWDTIFAPQVP--GFPKAELNDIASVEKLITDKT------VAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLL 215 (395)
T ss_pred hcCCcccccCCCCCCC--CceeeCCchHHHHHHHcCCCc------eEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 6664111111112111 11 247889998886432 36777777777788776 99999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCC
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYK 362 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 362 (517)
+++|+++.|+.-...-+....-++ ..|.+++ .|.++..++.|.++++++-. .+ .+.+..
T Consensus 216 lI~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~--gK~lg~G~p~~av~~~~~i~---~~--~~~~~~------------- 274 (395)
T PRK03715 216 LIVDEVQTGCGRTGTLFAYELSGI-EPDIMTL--GKGIGGGVPLAALLAKAEVA---VF--EAGDQG------------- 274 (395)
T ss_pred EEEeccccCCCCCcchhhHhhcCC-CCceeee--hhhhhCCcceEEEEEccccc---cc--cCCCcC-------------
Confidence 999999987422211111111133 4787766 49998767788888765421 11 111111
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCeeEEEEEecCCCcchhhhh
Q 010125 363 DWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD---KRFEIVFPCHFAVVCFRVSPSPVLMDKLK 439 (517)
Q Consensus 363 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~~~~~~~~ 439 (517)
.|+ .+.+.......++++.+.. .+.+++..++.++|++.|+++ .++.-+ .-...++.+.+....
T Consensus 275 -~T~-~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~~------- 341 (395)
T PRK03715 275 -GTY-NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGKDI------- 341 (395)
T ss_pred -CCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecCch-------
Confidence 011 1112233344455555532 346677788888888888653 123211 122344455443210
Q ss_pred hhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 440 TKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
.....+....+.++|... ... +...+|++. ....+++||+++++.|.++.+++
T Consensus 342 --------------~~~~~~~~~~~~~~Gi~~-~~~---~~~~lR~~p-~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 342 --------------GPQIVEKARDMQPDGLLL-NAP---RPNLLRFMP-ALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred --------------HHHHHHHHHhccCCCEEE-eec---CCCEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 011112222333447543 221 225799998 56788889999999999887654
No 297
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.55 E-value=5.2e-12 Score=131.83 Aligned_cols=320 Identities=10% Similarity=-0.017 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
++.+.++.+.|.+++.-.. ....|+++||+|+..|+..||.....+ |..+ ..-+|.....-|-...-+..+
T Consensus 84 ~~~~~~la~~l~~~~p~~~-------~~v~f~~sGseA~e~A~klar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~ls~ 154 (423)
T PRK05964 84 HEPAERLAQRLVALTPGGL-------DHVFFSDSGSVAVEVALKMALQYWRNR-GEPG-RSRFLSLRGGYHGDTIGTMSV 154 (423)
T ss_pred CHHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHHHHhc
Confidence 3445567777887763111 157999999999999999998753222 2111 223444444455333223222
Q ss_pred cCCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeec-cCCcccccc----ChhHHHHHHH
Q 010125 212 VGID---------VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATI-GTTAITAVD----PLKPLCDVAK 277 (517)
Q Consensus 212 ~G~g---------~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~-gtt~~G~id----pl~eI~~i~~ 277 (517)
.+-+ ...+..+|....+....++++|++.+.+.. ..+.+|++.- .....|.+- .+++|.++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~---~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~ 231 (423)
T PRK05964 155 GDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKHA---GEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICD 231 (423)
T ss_pred CCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCC---CcEEEEEEecccccCCCcccCCHHHHHHHHHHHH
Confidence 2210 012344444311111223788888886421 2333555543 244456543 3999999999
Q ss_pred HhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCC---ccccCCccc
Q 010125 278 QFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTN---PEYLKNKAT 353 (517)
Q Consensus 278 ~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~---~~yl~~~~~ 353 (517)
+||+++++|++|.|+.....-+.....++ ..|.+++ .|+++.+ ++.|+++.+++ . .+.+... ..++..
T Consensus 232 ~~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~--~K~l~gG~~p~~av~~~~~-i-~~~~~~~~~~~~~~~~--- 303 (423)
T PRK05964 232 RHGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCL--SKGLTGGYLPLAATLCTAE-I-FEAFYSDDRAKAFMHS--- 303 (423)
T ss_pred HcCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeee--ehhhhcCcccceEEEEcHH-H-HHhhhcCCcccccccC---
Confidence 99999999999976532211101011123 4677665 5999877 57888776533 2 2333211 000100
Q ss_pred cccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCeeEEEEEecCC
Q 010125 354 ESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF--PCHFAVVCFRVSPS 431 (517)
Q Consensus 354 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~--~~~~~~v~f~~~~~ 431 (517)
.++ .+......+..++++.+..+ +..++..++.+++.+.|+++..+..+. .....++.+.+...
T Consensus 304 ----------~T~-~~np~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~ 369 (423)
T PRK05964 304 ----------PSY-TANPLACAAANASLDLFEDE---PVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRP 369 (423)
T ss_pred ----------CCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccC
Confidence 011 11111222333344443322 356777778888888887653332221 12334456666432
Q ss_pred CcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 432 PVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
. . +.....+.+.|.++|.+. .+. + ..+|++. ....+++|||+++++++++.+++
T Consensus 370 ~-----------------~---~~~~~~l~~~l~~~Gv~v-~~~---~-~~lR~~p-~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 370 V-----------------L---ERDGPALRAFALERGVLL-RPL---G-NTIYLMP-PYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred c-----------------c---hhHHHHHHHHHHHCCeEE-Eec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHhhC
Confidence 0 0 123457778888889654 322 2 4799997 56778889999999999887653
No 298
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=99.54 E-value=1.4e-13 Score=136.22 Aligned_cols=205 Identities=20% Similarity=0.300 Sum_probs=157.5
Q ss_pred CCeEEEeCCCCchHHH-HHHHHcCCCCCCEEEEecCCCC--CcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc
Q 010125 191 SKLIVYGSDQTHCALQ-KAAQIVGIDVKNFRAIKTTKSS--SYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD 267 (517)
Q Consensus 191 ~~~~v~~s~~~H~s~~-kaa~~~G~g~~~v~~vp~d~~~--~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id 267 (517)
..+++|+|+..|.-.. -+|+-+|+....+..++-...+ .|+||...+++.|+++..+|+.|+++++..|++..|..|
T Consensus 230 aaPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 230 AAPTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred cCceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 4688999999997654 5889999955455554422111 369999999999999999999999999999999999999
Q ss_pred ChhHHHHHHHHhC-CeEEcccccccccccCcccccccc-CCCCCCeeeeccccccCCCCcceEEEEeCchhH-HhhhcCC
Q 010125 268 PLKPLCDVAKQFG-IWVHVDAAYAGSACICPEFRHFID-GVEGADSFSLNAHKWFFATLDCCCLWVKDPRAL-VSSLSTN 344 (517)
Q Consensus 268 pl~eI~~i~~~~g-i~lhvDaA~g~~~~~~~~~~~~~~-g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~-~~~~~~~ 344 (517)
.|-.|.+||++|+ +|||.-| |+..++.+.+...... -.+..||++++.--||+.|-.--+++-|.-+-. ..+|..+
T Consensus 310 mi~kildi~eahakfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg~aaSafesd 388 (838)
T KOG0630|consen 310 MILKILDICEAHAKFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEGSAASAFESD 388 (838)
T ss_pred HHHHHHHHHHHhhheeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccccccchhcccC
Confidence 9999999999998 9999986 5555555544222211 135799999999999999854444443322110 0011111
Q ss_pred ccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 010125 345 PEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF 417 (517)
Q Consensus 345 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~ 417 (517)
.-.+++..++.+|.+++++|...+.++++....+++.+.+.+.++++++++.
T Consensus 389 ---------------------pi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig 440 (838)
T KOG0630|consen 389 ---------------------PILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIG 440 (838)
T ss_pred ---------------------hHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEec
Confidence 1245678999999999999999999999999999999999999999999874
No 299
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.53 E-value=2e-11 Score=127.97 Aligned_cols=316 Identities=10% Similarity=0.045 Sum_probs=183.2
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+....++.+.|++++.-... ...|+++||+||..|+..||...-+ .+ ...+|.....-|-...-+...
T Consensus 123 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t~~----~g-r~~ii~~~~~yHG~t~~~ls~ 190 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSP----RG-KFTFIATSGAFHGKSLGALSA 190 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCchHHHHHHHHHHHHHhcc----CC-CcEEEEecCCCCCCcHHHhhh
Confidence 34455566777776532111 5789999999999999999875311 11 112333333344333333333
Q ss_pred cCCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHH
Q 010125 212 VGIDV---------KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQ 278 (517)
Q Consensus 212 ~G~g~---------~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~ 278 (517)
.|-.. ..+..+|. -|.+++++++++..+.+..+.+|++.......|.+-| ++++.++|++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~ 263 (459)
T PRK11522 191 TAKSTFRKPFMPLLPGFRHVPF-------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDE 263 (459)
T ss_pred cCCcccccCCCCCCCCCcccCC-------CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHH
Confidence 33210 01222322 1678899988754333444567777776667788877 9999999999
Q ss_pred hCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 279 FGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
||+.+++|.++.|+.....-+.....|+ ..|.+++ .|.++.. +++|.++++++ .. +.+... ++....
T Consensus 264 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~~~------ 331 (459)
T PRK11522 264 FGALLILDEVQTGMGRTGKMFACEHENV-QPDILCL--AKALGGGVMPIGATIATEE-VF-SVLFDN-PFLHTT------ 331 (459)
T ss_pred cCCEEEeccceecCCccchhhhhhccCC-CCCEEEe--chhhhCCCccceeEEEcHH-HH-HHhccC-CcccCC------
Confidence 9999999999976432221111111233 4687654 7999865 36888888643 22 222211 111100
Q ss_pred cccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeE-EecC--CCeeEEEEEecCCCc
Q 010125 358 VVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFE-IVFP--CHFAVVCFRVSPSPV 433 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~-l~~~--~~~~~v~f~~~~~~~ 433 (517)
++ .+.+.......++++.+-.+ +..++..++.++|.+.|+++. .+. ++.. -...++.+.+...
T Consensus 332 -------T~-~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~~-- 398 (459)
T PRK11522 332 -------TF-GGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDN-- 398 (459)
T ss_pred -------CC-CCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecCc--
Confidence 11 11122233445556655443 355777778888888887641 121 1111 1233445554332
Q ss_pred chhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 434 LMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
.....+.+.+.++|.+. .+.. .+..++|++. ....+++||++++++|.++.+++.+
T Consensus 399 ---------------------~~~~~i~~~l~~~Gvl~-~~~~-~~~~~lr~~P-pl~~t~~~id~~l~~l~~~l~~~~~ 454 (459)
T PRK11522 399 ---------------------EIGYNFASEMFRQRVLV-AGTL-NNAKTIRIEP-PLTLTIEQCEQVLKAARKALAAMRV 454 (459)
T ss_pred ---------------------hHHHHHHHHHHHCCeEE-EecC-CCCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHHHH
Confidence 22456777888888643 3322 2346899998 4577888999999999999888776
Q ss_pred hc
Q 010125 514 AF 515 (517)
Q Consensus 514 ~~ 515 (517)
..
T Consensus 455 ~~ 456 (459)
T PRK11522 455 SV 456 (459)
T ss_pred hh
Confidence 54
No 300
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.51 E-value=2.3e-12 Score=127.68 Aligned_cols=312 Identities=14% Similarity=0.105 Sum_probs=193.6
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCch-HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC-EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
..|-..+...+-+..|++... ..++++-+| |++.+.|.+.|.+ + ....|+.+...|+|-.|++.
T Consensus 55 ~~ltn~l~~d~~~~~G~~~~~------~~~~vP~atgm~l~l~l~~l~~r--~-------~a~~Viw~ridqkSc~kai~ 119 (389)
T PF05889_consen 55 AKLTNSLVLDALRLAGLRSVK------SCFVVPMATGMSLTLCLLALRMR--P-------KAKYVIWPRIDQKSCFKAIE 119 (389)
T ss_dssp HHHHHHHHHHHHHHTTHTTHC------EEEEESS-HHHHHHHHHHHHHHH--C-------T--EEEEEEEETHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcccc------ceEEEecccccHHHHHHHHHhcc--c-------CCceEEEeeccccchHHHHH
Confidence 344455555556678887542 567777776 6666667766622 1 23457778899999999999
Q ss_pred HcCCCCCCEEEEecCCC-CCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc-cChhHHHHHHHHhCCeEEcccc
Q 010125 211 IVGIDVKNFRAIKTTKS-SSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAA 288 (517)
Q Consensus 211 ~~G~g~~~v~~vp~d~~-~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i-dpl~eI~~i~~~~gi~lhvDaA 288 (517)
..|+ +++.||.... +....|.+.+|+++++. |..+.+.+.|..+-..|.. |++++|++||++||+.++|.+|
T Consensus 120 ~AGl---~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnA 193 (389)
T PF05889_consen 120 RAGL---EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNA 193 (389)
T ss_dssp HTT----EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGT
T ss_pred hcCC---eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccc
Confidence 9999 9999986322 23566899999999543 4456777888766666766 6699999999999999999999
Q ss_pred cccccccCcccccccc---CCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCcc
Q 010125 289 YAGSACICPEFRHFID---GVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQ 365 (517)
Q Consensus 289 ~g~~~~~~~~~~~~~~---g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 365 (517)
||.-.- ...++++ -..+.|.+.-+.-|-|.+|.|.+.+...++..+...- ..|-.
T Consensus 194 YgvQ~~---~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs---~~YpG---------------- 251 (389)
T PF05889_consen 194 YGVQSS---KCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVS---KEYPG---------------- 251 (389)
T ss_dssp TTTT-H---HHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHH---HTSHS----------------
T ss_pred hhhhHH---HHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHH---HHhhh----------------
Confidence 976321 1111111 1247899999999999999999999887775543221 12211
Q ss_pred ccCCCCC--CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCee-EEEEEecCCCcchhhhh
Q 010125 366 ITLSRRF--RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD---KRFEIVFPCHFA-VVCFRVSPSPVLMDKLK 439 (517)
Q Consensus 366 ~~~sr~~--~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~l~~~~~~~-~v~f~~~~~~~~~~~~~ 439 (517)
|-+ ..+-+...+..+|..|+...+....++-.++.++|++. -+-.+...|... .+.|....-. .
T Consensus 252 ----Ras~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~--~---- 321 (389)
T PF05889_consen 252 ----RASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLY--E---- 321 (389)
T ss_dssp ----HBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCC--T----
T ss_pred ----hhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccch--h----
Confidence 111 22556777888899999999999999988888888642 133344334322 2344433210 0
Q ss_pred hhhhccccchHHHHHHHHHHHHHHHHhcCcE---EEeeeeECCE--------eEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 440 TKYVNCLLSEEEQINEFNRELLESINASGKA---YMTHAVLGGI--------YAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 440 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~~~g~--------~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
... .....|...|..+|+. .+.+..-... .+|-++. ....+++|||.+++.|+++.
T Consensus 322 --------~~~----k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As-aiG~~~eevd~~v~rL~k~i 388 (389)
T PF05889_consen 322 --------ISQ----KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS-AIGMTREEVDYFVKRLDKII 388 (389)
T ss_dssp --------CCS----SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE--TT--HHHHHHHHHHHHHHH
T ss_pred --------hcc----chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHH-HhCCCHHHHHHHHHHHHHHh
Confidence 000 1124556666666643 2222111112 5777753 46788999999999999876
Q ss_pred H
Q 010125 509 E 509 (517)
Q Consensus 509 ~ 509 (517)
+
T Consensus 389 ~ 389 (389)
T PF05889_consen 389 K 389 (389)
T ss_dssp H
T ss_pred C
Confidence 4
No 301
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.50 E-value=5.1e-11 Score=117.45 Aligned_cols=331 Identities=11% Similarity=0.115 Sum_probs=206.7
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCc
Q 010125 123 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTH 202 (517)
Q Consensus 123 ~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H 202 (517)
..|..+.+..+|-..+.+.....+..+... ....++|+|.|.+...++.++.+ .++.|++...++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~----~wdiiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty 158 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYK----NWDIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTY 158 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCC----CceEEEecCCchHHHHHHHHhhc-----------CCCceEEecccc
Confidence 466677777777766666555555555432 23789999999999999988877 466799999999
Q ss_pred hHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhc--C-Ccce-EEEeeccCCccccccCh---hHHHHH
Q 010125 203 CALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEV--G-LIPL-FLCATIGTTAITAVDPL---KPLCDV 275 (517)
Q Consensus 203 ~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~--g-~~p~-~vv~t~gtt~~G~idpl---~eI~~i 275 (517)
.+-..+++.+|+ +++.|+.|.+ .|+++.|++.+...+-. + .+|- +-.+-.|.|+||.--.+ ++|.++
T Consensus 159 ~~AL~s~~a~gv---~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~L 232 (472)
T KOG0634|consen 159 PSALQSMEALGV---KIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQL 232 (472)
T ss_pred hHHHHhccccCc---eEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHH
Confidence 999999999999 8888888753 69999999999765432 1 3353 22333478999987665 689999
Q ss_pred HHHhCCeEEcccccccccccC---------cccc------ccccCCC--CCC--eeeec-cccccCCCCcceEEEEeCch
Q 010125 276 AKQFGIWVHVDAAYAGSACIC---------PEFR------HFIDGVE--GAD--SFSLN-AHKWFFATLDCCCLWVKDPR 335 (517)
Q Consensus 276 ~~~~gi~lhvDaA~g~~~~~~---------~~~~------~~~~g~~--~aD--si~~~-~hK~l~~p~~~g~l~~~~~~ 335 (517)
|+||++.++.|.-|.-..+.. +.+. .+....- ..| +|..+ +.|.+......|++-..+.
T Consensus 233 ArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~- 311 (472)
T KOG0634|consen 233 ARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL- 311 (472)
T ss_pred HHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH-
Confidence 999999999999985543321 0011 1111111 111 34443 7788876666776644322
Q ss_pred hHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH----HHHHHHHHHHhc-C
Q 010125 336 ALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHV----NMAKLFERLVSG-D 410 (517)
Q Consensus 336 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~----~~a~~l~~~l~~-~ 410 (517)
.+.+.+ .. .+...+....+...-+++.++..|.+|+.+.+.+.. .++..+-..+.+ +
T Consensus 312 ~l~ril-------~~-----------ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kyl 373 (472)
T KOG0634|consen 312 FLKRIL-------DL-----------AEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYL 373 (472)
T ss_pred HHHHHh-------hh-----------cceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 222221 11 111222222345567888899999988777765544 455555555543 4
Q ss_pred CC--eEEecCCCeeEE-EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE------C-CE
Q 010125 411 KR--FEIVFPCHFAVV-CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL------G-GI 480 (517)
Q Consensus 411 ~~--~~l~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------~-g~ 480 (517)
|. +++. +|..+++ .+.+.=.. ++ ....+++.-..+...+.+.|+.++.++.+ . ++
T Consensus 374 p~~~~~~~-~P~aGmFiwv~i~~~~---~~-----------~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~k 438 (472)
T KOG0634|consen 374 PKSVCEYH-PPKAGMFIWVEIPYIN---FD-----------TKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSK 438 (472)
T ss_pred CCCeeEEe-cCCcceEEEEEecccc---cc-----------cccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCc
Confidence 54 3444 5555544 44443000 00 01123455566777778889876665533 1 23
Q ss_pred eEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 481 YAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 481 ~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
-++|+++. ..+.+++++.++++..+.++
T Consensus 439 iffRls~a--~a~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634|consen 439 IFFRLSIA--FAEPEKLDEGIERFGSVIKE 466 (472)
T ss_pred ceEEEEee--cCCHHHHHHHHHHHHHHHHH
Confidence 49999994 34566777777766666554
No 302
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.50 E-value=3.3e-11 Score=125.77 Aligned_cols=317 Identities=11% Similarity=0.057 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEE-cCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
+..+.++.+.|.+++..+... ....+| +++||+||..|+..||... | ...+|.+...-|-...-+..
T Consensus 81 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~ls 148 (425)
T PRK09264 81 TTAKREFLETFEETILKPRGL----DYKVQFTGPTGTNAVEAALKLARKVT----G----RTNIVAFTNGFHGMTLGSLA 148 (425)
T ss_pred cHHHHHHHHHHHHhhcCCcCC----CceEEEeCCCHHHHHHHHHHHHHHhc----C----CCeEEEECCccCCccHHHHH
Confidence 344555667777765333211 002345 4799999999999998751 1 22234444444533322332
Q ss_pred HcC---------CCCCCEEEEecCCCCCcc-cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc----cChhHHHHHH
Q 010125 211 IVG---------IDVKNFRAIKTTKSSSYG-LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV----DPLKPLCDVA 276 (517)
Q Consensus 211 ~~G---------~g~~~v~~vp~d~~~~~~-~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i----dpl~eI~~i~ 276 (517)
..| .....+..+|........ -|+++|++.+++.......+.+|++.......|.+ +.+++|.++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc 228 (425)
T PRK09264 149 VTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLC 228 (425)
T ss_pred hcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHH
Confidence 222 111245666653110001 26788898886532111234566666555556654 4699999999
Q ss_pred HHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccc
Q 010125 277 KQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFA-TLDCCCLWVKDPRALVSSLSTNPEYLKNKATES 355 (517)
Q Consensus 277 ~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 355 (517)
++||+++++|+++.|+......+.....++ ..|.+++ .|.++. .+.+|++++++. +. .+. .....
T Consensus 229 ~~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~--~K~l~~~G~pigav~~~~~--i~-~~~--~~~~~------ 294 (425)
T PRK09264 229 RKHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTL--SKSISGYGLPMALVLIKPE--LD-VWK--PGEHN------ 294 (425)
T ss_pred HHcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEe--ccccCCCccceEEEEEchh--hh-ccC--CCccC------
Confidence 999999999999987532111111011123 5687776 499876 667899988744 21 221 00000
Q ss_pred cccccCCCccccCCCCCCchHHHHHH-HHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCC-CeeEEEEEec
Q 010125 356 MQVVDYKDWQITLSRRFRSLKLWFVI-RNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPC-HFAVVCFRVS 429 (517)
Q Consensus 356 ~~~~~~~~~~~~~sr~~~al~~~~~l-~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~-~~~~v~f~~~ 429 (517)
.++. +.........+++ ..+..+ +..++..++.++|++.|++ .|.+ +.... ...++.+.+.
T Consensus 295 --------~T~~-gnp~~~aaa~a~l~~~~~~~---~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~ 361 (425)
T PRK09264 295 --------GTFR-GNNLAFVTATAALEEYWSDD---AFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFG 361 (425)
T ss_pred --------CCCC-CCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEec
Confidence 0111 1111112233444 222222 3556666677777776654 3322 11112 2233344443
Q ss_pred CCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 430 PSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
+ .....++.+.+.++|..+.. .... ...||++. ....++++|++++++|.++.+
T Consensus 362 ~-----------------------~~~~~~l~~~~~~~Gv~~~~-~~~~-~~~lr~~p-~l~~t~~ei~~~~~~l~~~l~ 415 (425)
T PRK09264 362 D-----------------------GELAGKIAAEAFENGLIIET-SGPE-DEVVKLLP-PLTIDEEELEEGLDILEEAVA 415 (425)
T ss_pred C-----------------------hHHHHHHHHHHHHCCCEEec-cCCC-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHH
Confidence 2 13346778888888975533 2111 35788886 456778899999999999988
Q ss_pred HHHh
Q 010125 510 AFQS 513 (517)
Q Consensus 510 ~l~~ 513 (517)
++.+
T Consensus 416 ~~~~ 419 (425)
T PRK09264 416 EVLA 419 (425)
T ss_pred HHHh
Confidence 7654
No 303
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.50 E-value=2.5e-11 Score=133.14 Aligned_cols=363 Identities=11% Similarity=0.046 Sum_probs=216.6
Q ss_pred ChhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHH-H------HHHHhcccccccccc
Q 010125 54 EPGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFL-G------EMLSSGFNIVGFNWI 126 (517)
Q Consensus 54 ~~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~------~~l~~~~n~~~~~~~ 126 (517)
-|..++..-+..+|+ +.+..++++++++....+.. ...|.|--.-..-.|+++ . +|++++ .++.....
T Consensus 45 iP~~ir~~~~l~lp~-~~sE~e~~~~~~~~a~kN~~---~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaY-TPYQpEis 119 (954)
T PRK12566 45 VPPAIRLNRPLDLPA-ALDEQAALARLRGYAEQNQV---WTSLIGMGYHGTVTPTVILRNVLENPGWYTAY-TPYQPEIA 119 (954)
T ss_pred CCHHHhcCCCCCCCC-CCCHHHHHHHHHHHHhcCCC---ccccccccccCCcCcHHHHHHHHhCchhhhcC-CCCCchhh
Confidence 356665333345666 68999999999987666644 334555322233345555 2 233432 33333333
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ 206 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ 206 (517)
++.....+|. ..++++|.|++-. +..+..++|.+-- |+..++... +. .+..+++++..|+...
T Consensus 120 QG~Lqal~e~--Qtmi~~LtGm~va-------NASl~D~atA~aE-A~~ma~~~~-~~------k~~~~~v~~~~hP~~~ 182 (954)
T PRK12566 120 QGRLEALLNF--QQMTIDLTGLDLA-------NASLLDEATAAAE-AMALAKRVA-KS------KSNRFFVDEHCHPQTL 182 (954)
T ss_pred hHHHHHHHHH--HHHHHHHhCchhh-------hhhhccchhHHHH-HHHHHHHHh-hc------CCCEEEECCCCCHHHH
Confidence 4444444554 4899999999965 4566777775443 333333211 10 2446899999998755
Q ss_pred HHH----HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 207 KAA----QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 207 kaa----~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
... +.+|+ +++. ++|++.+.++ .+.|+++.+++ .|.|.++++|++++|+.|..
T Consensus 183 ~v~~t~~~~~g~---~i~~-------------~~~~~~~~~~------~~~v~vq~P~~-~G~i~d~~~i~~~~h~~gal 239 (954)
T PRK12566 183 SVLRTRAEGFGF---ELVV-------------DAVDNLAAHA------VFGALLQYPDT-HGEIRDLRPLIDQLHGQQAL 239 (954)
T ss_pred HHHHHhhhcCCc---EEEE-------------cchhhcCCCC------EEEEEEECCCC-ceEEccHHHHHHHHHHcCCE
Confidence 443 34455 5543 2234433332 35788888875 69999999999999999988
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-----cceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-----DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-----~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
++ +++--........... -+||+++. -++-|+.|. ..|++.++++ +. ...|+.+.+...+..+
T Consensus 240 ~~-~~~d~laL~ll~~Pge-----~GADI~vG-~~Q~fGvp~~~GGP~ag~~a~~~~--~~---R~~PGRivG~s~D~~G 307 (954)
T PRK12566 240 AC-VAADLLSLLVLTPPGE-----LGADVVLG-STQRFGVPMGYGGPHAAYFACRDD--YK---RAMPGRIIGVSRDARG 307 (954)
T ss_pred EE-EEeCHHHHhCCCChhh-----cCCcEEee-CCCcCCCCCCCCCCCeeeeeehHH--HH---hhCCCCccceeecCCC
Confidence 65 4444333322222222 28998844 445555553 3778888764 22 2335555443333223
Q ss_pred cccCCCccccC----CCCCCc----------hHHHHHH--HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCe
Q 010125 358 VVDYKDWQITL----SRRFRS----------LKLWFVI--RNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHF 421 (517)
Q Consensus 358 ~~~~~~~~~~~----sr~~~a----------l~~~~~l--~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~ 421 (517)
...+. .++|. -||-.| +++.+++ -++|.+|++++-++...++.+|++.|++ .|+++..++.+
T Consensus 308 ~~a~~-l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~fF 385 (954)
T PRK12566 308 NTALR-MALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRHFF 385 (954)
T ss_pred Ceeee-hhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCCcc
Confidence 22221 12222 244222 2333333 2359999999999999999999999998 69999877777
Q ss_pred eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHH
Q 010125 422 AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAW 501 (517)
Q Consensus 422 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~ 501 (517)
..+++++... ..++.++..+.|.-+.. ++ ...+.+|+ .-.++.+|++.++
T Consensus 386 ~~~~v~~~~~-------------------------~~~~~~~a~~~~~n~r~---~~-~~~~~~s~-de~~~~~~~~~~~ 435 (954)
T PRK12566 386 DTLTLEVGGA-------------------------QAAIIESAEAARINLRI---LG-RGRLGVSL-DETCDEATVARLF 435 (954)
T ss_pred ceEEEEccCC-------------------------HHHHHHHHHHCCCeeEE---eC-CCeEEEEe-CCCCCHHHHHHHH
Confidence 7777776211 23455555556653321 22 23588898 4688889999999
Q ss_pred HHHH
Q 010125 502 TVVQ 505 (517)
Q Consensus 502 ~~l~ 505 (517)
+++.
T Consensus 436 ~~f~ 439 (954)
T PRK12566 436 DIFL 439 (954)
T ss_pred HHhc
Confidence 9884
No 304
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=6.6e-11 Score=123.94 Aligned_cols=319 Identities=11% Similarity=0.038 Sum_probs=177.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
...+.++.+.|++++. ... ...+|+++||+||..|+..||... | .+.+|.+....|-+..-+..+
T Consensus 85 ~~~~~~la~~L~~~~~--~~~-----~~v~f~~SGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~s~ 149 (433)
T PRK08117 85 YESILKLAEELAEITP--GGL-----DCFFFSNSGAEAIEGALKLAKHVT----K----RPYIISFTGCFHGRTLGALSV 149 (433)
T ss_pred CHHHHHHHHHHHHhCC--CCC-----CEEEEeCcHHHHHHHHHHHHHHhc----C----CCeEEEECCCcCCcCHHHHhh
Confidence 3445556667777762 111 157889999999999999998652 1 233555555567655444333
Q ss_pred cCC--------C--CCCEEEEecCCCCCcc------------cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC-
Q 010125 212 VGI--------D--VKNFRAIKTTKSSSYG------------LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP- 268 (517)
Q Consensus 212 ~G~--------g--~~~v~~vp~d~~~~~~------------~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp- 268 (517)
.+- + ...+..+|... .++ -++++|++.+++... +..+.+|++.......|.+-|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~aavi~Epi~~~~G~~~~~ 226 (433)
T PRK08117 150 TTSKSKYRKYYQPLLGSVYQAPYPY--CDRCPKGEDPEVCFLECLRDLESLFKHQVT-PEEVAAVIIEPVLGEGGYIVPP 226 (433)
T ss_pred cCCCccccccCCCCCCCcEEeCCCc--cccccccCchhHHHHHHHHHHHHHHHhccC-CCcEEEEEECCeeCCCCCccCC
Confidence 321 0 11234454421 011 156677777764211 223556777666667788877
Q ss_pred ---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCc
Q 010125 269 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNP 345 (517)
Q Consensus 269 ---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~ 345 (517)
+++|.++|++||+.+++|.+|.|+......+.....++ ..|. .++.|.++..+..|+++.++. +.+.+...
T Consensus 227 ~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi--~t~sK~lg~G~pigav~~~~~--i~~~~~~~- 300 (433)
T PRK08117 227 KSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDI--MTIAKGIASGLPLSAVVASKE--LMEQWPLG- 300 (433)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCE--eehhhhccCCCcceeEEEcHH--HHhhccCC-
Confidence 99999999999999999999987432211110000122 3455 467899987677888877543 22222110
Q ss_pred cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC-CCe-e
Q 010125 346 EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFP-CHF-A 422 (517)
Q Consensus 346 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~-~~~-~ 422 (517)
. . ..++ .+......+..++++.+..+ +..++..++.+++++.|+++. .+.++.. +.. .
T Consensus 301 --~-~------------~~T~-~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl 361 (433)
T PRK08117 301 --S-H------------GTTF-GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGL 361 (433)
T ss_pred --C-C------------CCCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCc
Confidence 0 0 0011 11112223334444444333 345566667777777776531 1111111 111 2
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWT 502 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~ 502 (517)
++.+.+.+.. .... ......+.+.+.+.|.++.... ....++|+++ ...+++++|+++++
T Consensus 362 ~~gi~~~~~~--------------~~~~---~~~~~~~~~~l~~~Gv~~~~~g--~~~~~lRl~p-~~~~t~~~i~~~~~ 421 (433)
T PRK08117 362 MIGIEIVDPD--------------GEPD---GDAVEKILDKCLEKGLLFYLCG--NAGNVLRMIP-PLTVTKEEIDEGLD 421 (433)
T ss_pred EEEEEEecCC--------------CCcc---hHHHHHHHHHHHHCCCEEeecC--CCCCEEEEeC-CccCCHHHHHHHHH
Confidence 2333333220 0000 1334567788888897654321 1246899997 34678889999999
Q ss_pred HHHHHHHHHHh
Q 010125 503 VVQQHLEAFQS 513 (517)
Q Consensus 503 ~l~~~~~~l~~ 513 (517)
+|.++.+++.+
T Consensus 422 ~l~~~l~~~~~ 432 (433)
T PRK08117 422 ILDEALTEYEA 432 (433)
T ss_pred HHHHHHHHHhc
Confidence 99998877643
No 305
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.48 E-value=2.5e-11 Score=122.44 Aligned_cols=236 Identities=15% Similarity=0.178 Sum_probs=162.7
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 126 ISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 126 ~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
...|....+|+.+ +.+=|.. .++.+++|..|+..++.+... +++.|++++..+...
T Consensus 60 ~~nPT~~~lE~~~----a~LEg~~---------~~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t 115 (396)
T COG0626 60 TGNPTRDALEEAL----AELEGGE---------DAFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGT 115 (396)
T ss_pred CCCccHHHHHHHH----HHhhCCC---------cEEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchH
Confidence 3467777777654 4443332 578888888887766655433 456677777766543
Q ss_pred HH----HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHH-hHhcCCcceEEEeeccCCccccccChhHHHHHHHHhC
Q 010125 206 QK----AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINS-DVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFG 280 (517)
Q Consensus 206 ~k----aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~-~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~g 280 (517)
.+ .....|+ ++..++. .+.+++++++.+ +++ +|.+..++|++.-+-||++|+++|+++|
T Consensus 116 ~~~~~~~l~~~gi---~~~~~d~-------~~~~~~~~~~~~~~tk------~v~lEtPsNP~l~v~DI~~i~~~A~~~g 179 (396)
T COG0626 116 YRLFEKILQKFGV---EVTFVDP-------GDDEALEAAIKEPNTK------LVFLETPSNPLLEVPDIPAIARLAKAYG 179 (396)
T ss_pred HHHHHHHHHhcCe---EEEEECC-------CChHHHHHHhcccCce------EEEEeCCCCcccccccHHHHHHHHHhcC
Confidence 33 3345677 7777653 255667777764 554 8999999999999999999999999999
Q ss_pred CeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC--cceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 281 IWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL--DCCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 281 i~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~--~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
+.++||..|+.+.+.-|- . -+||.+.-+..|+++.-- -.|+++.+++......+.....++
T Consensus 180 ~~vvVDNTfatP~~q~PL-~------~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~---------- 242 (396)
T COG0626 180 ALVVVDNTFATPVLQRPL-E------LGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANT---------- 242 (396)
T ss_pred CEEEEECCcccccccChh-h------cCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhc----------
Confidence 999999999888764331 1 179999999999997542 245555555543321111110111
Q ss_pred ccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------Ce
Q 010125 359 VDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-----------------HF 421 (517)
Q Consensus 359 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-----------------~~ 421 (517)
+--..+...|..+| |.+-+.-+++++.++|..+.+.|++.|.++-+.-| ..
T Consensus 243 ----------G~~l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~g 310 (396)
T COG0626 243 ----------GAVLSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYG 310 (396)
T ss_pred ----------CCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCc
Confidence 11224556688876 67888899999999999999999999988644322 35
Q ss_pred eEEEEEecC
Q 010125 422 AVVCFRVSP 430 (517)
Q Consensus 422 ~~v~f~~~~ 430 (517)
++++|.+..
T Consensus 311 g~~Sf~l~~ 319 (396)
T COG0626 311 GLFSFELKN 319 (396)
T ss_pred eEEEEEeCC
Confidence 688998865
No 306
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.47 E-value=9.2e-12 Score=128.79 Aligned_cols=234 Identities=17% Similarity=0.213 Sum_probs=168.1
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCC
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDV 216 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~ 216 (517)
+..+..++.||.+.++ ++++|+|.||...+.+... +++.|++...+|-|+..+..+.|+
T Consensus 74 eAqe~aA~~fgAd~ty--------FvvNGTS~ank~vi~a~~~-----------~GD~VLvdRN~HKSi~~glilaGa-- 132 (557)
T COG1982 74 EAQELAARVFGADHTY--------FVVNGTSTANKAVINAVLT-----------PGDKVLVDRNCHKSIHHGLILAGA-- 132 (557)
T ss_pred HHHHHHHHHhCCCceE--------EEECCccHHHHHHHHhhcC-----------CCCEEEecCCccHHHHHHHHHcCC--
Confidence 4457889999998874 7888888888766655533 778899999999999999999999
Q ss_pred CCEEEEecCCCC----CcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccc
Q 010125 217 KNFRAIKTTKSS----SYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 217 ~~v~~vp~d~~~----~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~ 292 (517)
..+++....+. -+.++.+.+++++.+..... .+++++.+| ..|.+-++++|.+.++++++|+.+|.+|+..
T Consensus 133 -~Pvyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnpT-YdGv~~n~~~i~~~~~~~~a~v~~deah~~~ 207 (557)
T COG1982 133 -TPVYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNPT-YDGVCYNLRKIVELLHHYGAWVLYDEAHPAH 207 (557)
T ss_pred -ceEEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecCc-cceEeecHHHHHHHHhhcCceEEhhhcCccc
Confidence 77777654332 15789999999987765321 367777666 6799999999999999999999999999887
Q ss_pred cccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCc-----hhHHhhh----cCCccccCCccccccccccCCC
Q 010125 293 ACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDP-----RALVSSL----STNPEYLKNKATESMQVVDYKD 363 (517)
Q Consensus 293 ~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~-----~~~~~~~----~~~~~yl~~~~~~~~~~~~~~~ 363 (517)
.-.++..... .--..+|.++-|.||.+++--.++.+.+++. ..+.++| +.+|.|.-
T Consensus 208 ~~~~~~l~~~-~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l-------------- 272 (557)
T COG1982 208 FDFSPMLPES-ALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPL-------------- 272 (557)
T ss_pred ccccccCcch-hhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHH--------------
Confidence 7665543321 1114799999999999998888999999872 2233333 11222211
Q ss_pred ccccCCCCCCchHH-HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 010125 364 WQITLSRRFRSLKL-WFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC 419 (517)
Q Consensus 364 ~~~~~sr~~~al~~-~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~ 419 (517)
+.++-+ -..+...|+.-+++-++...+.++++++.++++++|+++.++
T Consensus 273 --------~ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~ 321 (557)
T COG1982 273 --------MASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPE 321 (557)
T ss_pred --------HHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecccc
Confidence 011222 001111245555566888999999999999999889888654
No 307
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.47 E-value=1.1e-10 Score=121.50 Aligned_cols=307 Identities=10% Similarity=0.054 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+....++.+.|++++.-+.. ..+|+++|||||..|+..||....++ | ...+|.....-|-...-+..+
T Consensus 116 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t~~~-g----r~~ii~~~~~yHG~t~~~ls~ 183 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR-G----KFTFIAASGAFHGKSLGALSA 183 (442)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHhhc-C----CcEEEEECCCccCCCHHHhhc
Confidence 34455667777777532211 47899999999999999998753211 1 122344444455433333333
Q ss_pred cCCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHH
Q 010125 212 VGID---------VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQ 278 (517)
Q Consensus 212 ~G~g---------~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~ 278 (517)
.|-. ...++.+|.+ |.+.+++.+++..+.+....+|++.......|.+-| +++|.++|++
T Consensus 184 t~~~~~~~~~~p~~~~~~~~p~~-------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~ 256 (442)
T TIGR03372 184 TAKPAFRKPFMPLLPGFHHVAFG-------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDE 256 (442)
T ss_pred cCCcccCCCCCCCCCCCEEeCCC-------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHH
Confidence 2210 0123444432 678888888654333445667777666666788877 9999999999
Q ss_pred hCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 279 FGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
||+.+++|.++.|+.....-+.....++ ..|.++ ..|.++.. +++|++++++. +.+.+... ++....
T Consensus 257 ~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt--~gK~lg~G~~Pigavv~~~~--i~~~~~~~-~~~~~~------ 324 (442)
T TIGR03372 257 FGALLILDEVQTGMGRTGKMFACEHEGV-QPDILC--LAKALGGGVMPIGATIATEA--VFSVLFDN-PFLHTT------ 324 (442)
T ss_pred cCCEEEEeecccCCCccccchhhhhcCC-CCCeee--ehhhhcCCcccceEEEecHH--HHHhhhcc-CccccC------
Confidence 9999999999976432221111111233 578776 57999865 36788877633 22233211 111110
Q ss_pred cccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CC-eEEecCCCeeEEEEEecCCC
Q 010125 358 VVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD----KR-FEIVFPCHFAVVCFRVSPSP 432 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~----~~-~~l~~~~~~~~v~f~~~~~~ 432 (517)
++ .+.+....+..++++.+-.++ ..++..++.++|.+.|+++ |. +.=+ .-...++.+.+...
T Consensus 325 -------T~-~gnp~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v-RG~Gl~~giel~~~- 391 (442)
T TIGR03372 325 -------TF-GGNPLACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIEA-RGKGLLMAIEFRDN- 391 (442)
T ss_pred -------CC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecceEEEEEEeCCh-
Confidence 11 111222233344455543333 3455666777777776543 31 1111 12233444544321
Q ss_pred cchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 433 VLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
.....+.+.+.++|.+. .... .+...+|++. ....+++|+|++++++.+.
T Consensus 392 ----------------------~~~~~i~~~l~~~Gvl~-~~~~-~~~~~lr~~P-pl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 392 ----------------------EIGYAFAKELFQQNILV-AGTL-NNAKSIRIEP-PLTITIEQCALVIKAAKDA 441 (442)
T ss_pred ----------------------HHHHHHHHHHHHCCcEE-eecC-CCCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 23456778888888654 3221 1235899998 4577888999999998875
No 308
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.46 E-value=1.1e-10 Score=123.48 Aligned_cols=335 Identities=13% Similarity=0.035 Sum_probs=180.8
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+..+.++.+.|.+++.-.+- ...+|+++||+||..|+..||..... .|..+ .+.+|......|-+..-+..+
T Consensus 132 ~~~~~~lae~L~~~~~~~~~------~~v~f~~SGsEA~e~AlKlAr~~~~~-~g~~~-r~~iI~~~~~yHG~t~~a~sl 203 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARKM------GKVFFTNSGSEANDTQVKLVWYYNNA-LGRPN-KKKFIARSKSYHGSTLISASL 203 (504)
T ss_pred cHHHHHHHHHHHhhcCCCCC------CEEEEeCChHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCccCChHhhhhc
Confidence 44455566666666431111 24788999999999999999864211 12111 234566666777776555554
Q ss_pred cCCC---------CCCEEEEecCC-------CCC---c-ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---
Q 010125 212 VGID---------VKNFRAIKTTK-------SSS---Y-GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP--- 268 (517)
Q Consensus 212 ~G~g---------~~~v~~vp~d~-------~~~---~-~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp--- 268 (517)
.|.. ...+..++... .+. + ....++|++.+.+. ....+.+|++.......|.+-|
T Consensus 204 sg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~~~ 281 (504)
T PLN02760 204 SGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPPAT 281 (504)
T ss_pred cCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCCHH
Confidence 4431 01122333210 000 0 01234577776431 1223556666665666688877
Q ss_pred -hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCcc
Q 010125 269 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPE 346 (517)
Q Consensus 269 -l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~ 346 (517)
+++|.++|++||++|++|.++.|+.....-+..-.-|+ ..|.+++ -|.++..+ +.|+++++++ +.+.+.....
T Consensus 282 yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~~--i~d~~~~~~~ 356 (504)
T PLN02760 282 YFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSPE--ISDVIHSQSN 356 (504)
T ss_pred HHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEEEe--cccccCCccccceEeecHH--HHhhhhcccc
Confidence 99999999999999999999976644332221112234 4787665 79987653 5777777633 2233321110
Q ss_pred ccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEE
Q 010125 347 YLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC--HFAVV 424 (517)
Q Consensus 347 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~--~~~~v 424 (517)
.... -....|+. +.+.......++++.+-.+ +.+++..++.++|++.|+++....++... ...++
T Consensus 357 ~~~~---------~~h~~T~~-gnPl~~Aaala~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~ 423 (504)
T PLN02760 357 KLGS---------FAHGFTYS-GHPVSCAVALEALKIYKER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLIL 423 (504)
T ss_pred cccC---------cccCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEE
Confidence 0000 00001111 1112223333444444333 45677788888888888764222222111 12344
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.+.+..... . .........+...+.+.+.++|.+... .+ ..+|++. ....+++||+++++++
T Consensus 424 gie~~~~~~---------~---~~~~~~~~~~~~~i~~~~~~~Gvl~~~----~g-~~lrl~P-pl~it~eeid~~~~~l 485 (504)
T PLN02760 424 GTEFVDNKS---------P---NDPFPAEWGVGAYFGAECKKRGMLVRV----AG-DNIMMSP-PLIITPEEVDELISIY 485 (504)
T ss_pred EEEEecCCc---------c---cccccchhHHHHHHHHHHHhCCcEEEe----cC-CEEEEEC-CCCCCHHHHHHHHHHH
Confidence 444432210 0 000000023456777888889975432 12 3589886 3467888999999999
Q ss_pred HHHHHHHH
Q 010125 505 QQHLEAFQ 512 (517)
Q Consensus 505 ~~~~~~l~ 512 (517)
.++..++.
T Consensus 486 ~~al~~~~ 493 (504)
T PLN02760 486 GKALKATE 493 (504)
T ss_pred HHHHHHHH
Confidence 98877664
No 309
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.45 E-value=3.1e-11 Score=126.20 Aligned_cols=309 Identities=8% Similarity=0.004 Sum_probs=157.0
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHH-HHHHHcCC
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQ-KAAQIVGI 214 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~-kaa~~~G~ 214 (517)
.++++.+++.+.-.+ ..++++|||+|+..|+..+|... ++..|+.-+.++.... .+....+.
T Consensus 91 ~~lae~l~~~~~~~~--------~v~~~~sGseA~e~Alk~ar~~~---------gr~~ii~~~~~yhG~~~~~~~~~~~ 153 (423)
T TIGR00713 91 ILLAKEIISRVPSVE--------MVRFVNSGTEATMSAVRLARGYT---------GRDKIIKFEGCYHGHHDALLVKAGS 153 (423)
T ss_pred HHHHHHHHHhCCccc--------EEEEeCCHHHHHHHHHHHHHHhh---------CCCEEEEEcCCCCCChhhhhccccC
Confidence 344555555543221 57999999999999999998752 2233444334433322 22221111
Q ss_pred CCC----------------CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEee-ccCCccccccC----hhHHH
Q 010125 215 DVK----------------NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCAT-IGTTAITAVDP----LKPLC 273 (517)
Q Consensus 215 g~~----------------~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t-~gtt~~G~idp----l~eI~ 273 (517)
|.. .+..+|. -|+++|++++++. +..+.+|++. ..++ +|.+-| +++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~---~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~ 222 (423)
T TIGR00713 154 GAATLGLPTSPGVPEDFAKLTLVLPY-------NDLEALEEVFEEY---GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLR 222 (423)
T ss_pred cccccCCCCCCCCCcccccceEEeCC-------CCHHHHHHHHHHc---CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHH
Confidence 100 1111211 2899999998742 1223455554 4443 787766 79999
Q ss_pred HHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 010125 274 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKAT 353 (517)
Q Consensus 274 ~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 353 (517)
++|++||+++++|.+|.++. ..........++ ..|.+ .+.|.++..+..|+++.++. +.+.+.....+..
T Consensus 223 ~l~~~~~~llI~DEv~~g~r-~g~~~~~~~~~~-~pDi~--t~sK~l~~G~pig~v~~~~~--i~~~~~~~~~~~~---- 292 (423)
T TIGR00713 223 ALTEEYGSLLIFDEVMTGFR-VALGGAQEYFGV-EPDLT--TLGKIIGGGLPVGAFGGRRE--IMERLAPEGPVYQ---- 292 (423)
T ss_pred HHHHHhCCEEEEEccccccc-cCcchhHHHhCC-Ccchh--hhhhhhcCCCceeeeeEHHH--HHHhhCcCCCeee----
Confidence 99999999999999997663 211111111122 35654 47899986677888887543 2233321100000
Q ss_pred cccccccCCCccccCCCCCCchHHHHHHHHhcHHH-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCC
Q 010125 354 ESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVAN-LRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSP 432 (517)
Q Consensus 354 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g-~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~ 432 (517)
.+.-++.+.......++++.+..++ ++...+....+.+.+.+.+++. ++..-......++.+.+....
T Consensus 293 ----------~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~ 361 (423)
T TIGR00713 293 ----------AGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEE 361 (423)
T ss_pred ----------ccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCC
Confidence 0000111122233334454443322 2222333333444455555555 332211122344444343211
Q ss_pred cchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 433 VLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
..... .....+ ......+.+.+.++|.+ +.+.. ...+|++.. .++++|++++++|.++.++
T Consensus 362 ~~~~~---------~~~~~~-~~~~~~~~~~l~~~Gv~-v~~~~---~~~~~l~~~---~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 362 VTNYA---------DAKKSD-TELFAKFFHEMLDKGVF-LPPSQ---FEACFLSAA---HTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred CCChh---------hhhccc-HHHHHHHHHHHHHCCeE-EecCC---ccceeeECC---CCHHHHHHHHHHHHHHHhh
Confidence 00000 000000 12234677778888854 44332 235777652 5788999999999887754
No 310
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.45 E-value=2.5e-10 Score=110.91 Aligned_cols=357 Identities=14% Similarity=0.097 Sum_probs=209.7
Q ss_pred HHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCC
Q 010125 113 MLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISK 192 (517)
Q Consensus 113 ~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~ 192 (517)
.+........+.|+.|.+..-+.+.|++++.+.=|.|.+ +.++++|+|+|.|+...|...... ++
T Consensus 97 ~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~-----p~dI~LT~GAS~ai~~il~l~~~~----------~~ 161 (475)
T KOG0258|consen 97 RILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPAD-----PEDIFLTTGASPAIRSILSLLIAG----------KK 161 (475)
T ss_pred HHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCC-----HHHeeecCCCcHHHHHHHHHHhcC----------CC
Confidence 333333336779999999999999999999999886544 247999999999987666554332 33
Q ss_pred eEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc---cCh
Q 010125 193 LIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV---DPL 269 (517)
Q Consensus 193 ~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i---dpl 269 (517)
+-|+++-+-++-+...+..+|. ..+..-+|++.+|.+|+++|++.+++.. ++..|.++|+..+.|+||.+ ..+
T Consensus 162 ~GvliPiPQYPLYsAti~l~~~---~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~i 237 (475)
T KOG0258|consen 162 TGVLIPIPQYPLYSATISLLGG---TQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENI 237 (475)
T ss_pred CceEeecCCCchhHHHHHHhCC---cccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHH
Confidence 4466665666656666778887 6777778888899999999999999987 78889888888899999987 679
Q ss_pred hHHHHHHHHhCCeEEcccccccccccCc-c---cccccc--C---CCCCCeeeec-cccccCC--CCcceEEEE--eCch
Q 010125 270 KPLCDVAKQFGIWVHVDAAYAGSACICP-E---FRHFID--G---VEGADSFSLN-AHKWFFA--TLDCCCLWV--KDPR 335 (517)
Q Consensus 270 ~eI~~i~~~~gi~lhvDaA~g~~~~~~~-~---~~~~~~--g---~~~aDsi~~~-~hK~l~~--p~~~g~l~~--~~~~ 335 (517)
++|..+|+++|+.|..|..|--..+.-. . ++..+. | -..+..+++. .||.+.+ ....|-+=+ ++++
T Consensus 238 e~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~pr 317 (475)
T KOG0258|consen 238 EGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPR 317 (475)
T ss_pred HHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChh
Confidence 9999999999999999998855443221 1 111100 1 0133344443 5665542 222232211 1221
Q ss_pred hHHhhhcCCccccCCccccccccccCCCccccCCCCC-CchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 010125 336 ALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRF-RSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFE 414 (517)
Q Consensus 336 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~ 414 (517)
.....+.....-+...-. +.. ..+.......+. .....|.+-+ ..+...+...|+.+.+.+++++|++
T Consensus 318 v~~qi~Kl~si~lc~~V~--GQ~--~vdl~VnPP~Pgd~Sy~~~~~Ek-------d~il~~l~~ra~l~~~~~ns~~gi~ 386 (475)
T KOG0258|consen 318 VKQQIKKLASIKLCPQVS--GQK--LVDLVVNPPKPGDPSYDLFSSEK-------DGILSSLRSRAKLTEDAFNSLEGIS 386 (475)
T ss_pred HHHHHHHHHhhhhcCCcc--chh--hhceecCCCCCCCcchhhhhhhh-------HhHHHHHHHHhHHHHHHHhhcCcee
Confidence 111111000000100000 000 000000000000 1122222221 3456677778999999999999998
Q ss_pred EecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---CCEeEEEEEecCCC
Q 010125 415 IVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL---GGIYAIRFATGATL 491 (517)
Q Consensus 415 l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~g~~~lR~~~~~~~ 491 (517)
+ ++++..+..|.-.....+... .|.......+ . ---.+.|...|+..+++..+ .|...+|..+.-+.
T Consensus 387 c-n~~qGAMY~fP~i~lP~kaie--~A~~~~~~PD-----~--FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~ 456 (475)
T KOG0258|consen 387 C-NPVQGAMYLFPQISLPPKAIE--AAKALGIAPD-----E--FYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG 456 (475)
T ss_pred e-ccCccceeecccccCCHHHHH--HHHHhCCCCc-----H--HHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch
Confidence 7 488888988854322100000 0000000000 0 01123445678877777666 36789999986432
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhhc
Q 010125 492 TEKRHVVVAWTVVQQHLEAFQSAF 515 (517)
Q Consensus 492 t~~~di~~l~~~l~~~~~~l~~~~ 515 (517)
+ ..++.+++.=.++..+|
T Consensus 457 -----~-~~i~~~~~fH~~f~~~Y 474 (475)
T KOG0258|consen 457 -----L-EIIEKFKKFHAEFMDEY 474 (475)
T ss_pred -----h-HHHHHHHHHHHHHHHhh
Confidence 3 45555666555555444
No 311
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=8.7e-11 Score=116.69 Aligned_cols=302 Identities=15% Similarity=0.123 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH---
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA--- 209 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa--- 209 (517)
+...++.++|.++.+ ..+ ..+|++||+|||-.|+..||.+.. +.+ ..-+|.+...-|--..-+.
T Consensus 84 ~~~~~la~~L~~~s~-~~d-------~vff~NSGaEA~EaAiKlARk~~~---~~~--k~~Iia~~nsFHGRT~galS~t 150 (404)
T COG4992 84 EPQAELAEKLVELSP-FAD-------RVFFCNSGAEANEAALKLARKYTG---DPE--KSKIIAFENSFHGRTLGALSAT 150 (404)
T ss_pred hHHHHHHHHHHhhCc-ccc-------EEEEcCCcHHHHHHHHHHHHHHcC---CCC--CcEEEEEcCCcCCccceeeecc
Confidence 344456677888776 222 589999999999999999998743 000 1233444444452111111
Q ss_pred ------HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHh
Q 010125 210 ------QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQF 279 (517)
Q Consensus 210 ------~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~ 279 (517)
+-.+=-...++.+|.+ |+++|+++|++++. .|++.--.-..|.+-| ++++.++|++|
T Consensus 151 ~~~ky~~~F~Pl~~g~~~vpfn-------Di~al~~ai~~~ta------AvivEPIQGEgGV~~~~~~fl~~lr~lCd~~ 217 (404)
T COG4992 151 GQPKYRKGFGPLLPGFRHVPFN-------DIEALEAAIDEDTA------AVIVEPIQGEGGVIPAPPEFLKALRELCDEH 217 (404)
T ss_pred CChhhccCCCCCCCCceecCCC-------CHHHHHHHhccCeE------EEEEecccCCCCCCCCCHHHHHHHHHHHHHh
Confidence 1111001145566653 89999999999764 5666665555666633 89999999999
Q ss_pred CCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccc
Q 010125 280 GIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVV 359 (517)
Q Consensus 280 gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~ 359 (517)
|+.|+.|..+.|...-..-+..-..++ ..|.+++ -|.|+..++.|.++.++. ....+. +.--.
T Consensus 218 g~LLI~DEVQtG~GRTGk~fA~e~~gV-~PDI~tl--aK~LgGG~PigA~la~~~--~~~~~~--~G~Hg---------- 280 (404)
T COG4992 218 GALLILDEVQTGLGRTGKLFAYEHYGV-EPDILTL--AKALGGGFPIGAMLATEE--IASAFT--PGDHG---------- 280 (404)
T ss_pred CeEEEEeccccCCCccchHHHHHHhCC-CCCEEEe--eccccCCccceeeEEchh--hhhcCC--CCccc----------
Confidence 999999999987643222111111123 5677764 599988899999998722 111221 11000
Q ss_pred cCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEEEEEecCCCcchh
Q 010125 360 DYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFAVVCFRVSPSPVLMD 436 (517)
Q Consensus 360 ~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~~v~f~~~~~~~~~~ 436 (517)
+.-++.+......-++++.+-.++ .+++..+..++|.+.|+++. .+.++.+. ..-++-..+.+.
T Consensus 281 -----STfGGNpLacAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~----- 347 (404)
T COG4992 281 -----STFGGNPLACAVALAVLEVLLEEG---LLENVREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP----- 347 (404)
T ss_pred -----CCCCcCHHHHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc-----
Confidence 001121112223334455554444 45566667778888877642 12233222 122333444332
Q ss_pred hhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 437 KLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 437 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
.....+.+.+.++|.+.... +..++|+.. ....++++|+..+++|+++......
T Consensus 348 ------------------~~a~~~~~~~~~~gvL~~~a----~~~ViR~~P-pL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 348 ------------------YRARDIVRALREEGVLVLPA----GPNVIRFLP-PLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred ------------------ccHHHHHHHHHHCCeEEecC----CCCeEEecC-CccCCHHHHHHHHHHHHHHHHHhhh
Confidence 02456777788889654332 345899997 5678999999999999999876543
No 312
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.44 E-value=2.1e-10 Score=119.87 Aligned_cols=314 Identities=10% Similarity=0.019 Sum_probs=169.5
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCC
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGI 214 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~ 214 (517)
..++.+.++++.+.+.. ...+|+++|++|+..|+..+|... + ++.+|.++..-|-...-+....+-
T Consensus 86 ~~~la~~l~~~~~~~~~------~~~~f~~sGsea~e~Alklar~~~-~-------r~~iv~~~~~yHG~~~~~~~~~~~ 151 (425)
T PRK08088 86 YLELCEKMNQKVPGDFA------KKTLLVTTGSEAVENAVKIARAAT-K-------RSGVIAFTGAYHGRTHYTLALTGK 151 (425)
T ss_pred HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHHh-C-------CCeEEEECCccCCccHHHHHhhCC
Confidence 34677888887654321 156889999999999999998652 1 334555665556544333332221
Q ss_pred --------C--CCCEEE--EecCCCCCcccC----HHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHH
Q 010125 215 --------D--VKNFRA--IKTTKSSSYGLS----PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCD 274 (517)
Q Consensus 215 --------g--~~~v~~--vp~d~~~~~~~d----~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~ 274 (517)
+ ...+.. +|.+. + .++ ++.|++++++.. .+..+.+|++.......|.+-+ +++|.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~p~~~--~-~~~~~~~~~~l~~~l~~~~-~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~ 227 (425)
T PRK08088 152 VNPYSAGMGLMPGHVYRALYPCPL--H-GVSEDDAIASIERIFKNDA-APEDIAAIIIEPVQGEGGFYAASPAFMQRLRA 227 (425)
T ss_pred CCccccCCCCCCCCcEEcCCCccc--c-CccHHHHHHHHHHHHHhcc-CCCceEEEEECcccCCCCCcCCCHHHHHHHHH
Confidence 0 111222 22221 1 122 556888775321 1233556666655555566655 999999
Q ss_pred HHHHhCCeEEcccccccccccCcccccc-ccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 010125 275 VAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKAT 353 (517)
Q Consensus 275 i~~~~gi~lhvDaA~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 353 (517)
+|++||+++++|.+|+++.... ..... ..++ ..| ..++.|.++..+..|+++.+.. +.+.+.... +.
T Consensus 228 l~~~~~~~lI~Dev~~g~g~~g-~~~~~~~~~~-~pd--i~s~sK~l~~G~rig~v~~~~~--~~~~~~~~~-~~----- 295 (425)
T PRK08088 228 LCDEHGIMLIADEVQTGAGRTG-TLFAMEQMGV-AAD--LTTFAKSIAGGFPLAGVTGRAE--VMDAIAPGG-LG----- 295 (425)
T ss_pred HHHHcCCEEEEeccccCCCcCc-chhHHhhcCC-CCC--EEEEeccccCCCcceeeEecHH--HHhhcCCCC-CC-----
Confidence 9999999999999998743221 11110 1111 244 3567899987788898887433 222222110 00
Q ss_pred cccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeEEEEEec
Q 010125 354 ESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVS----GDKRFEIVFPCHFAVVCFRVS 429 (517)
Q Consensus 354 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~l~~~~~~~~v~f~~~ 429 (517)
.+.. ...+...+++..+..-..++++++...+.+++.+.|. +.|.+.-+..+ ..++.+.+.
T Consensus 296 ----------~t~~----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~ 360 (425)
T PRK08088 296 ----------GTYA----GNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELF 360 (425)
T ss_pred ----------CCCC----cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEe
Confidence 0111 1223333333332111223444455555555555553 34443222222 334555553
Q ss_pred CCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 430 PSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
..... ... -.....++.+.+.+.|..+.+...+ ..++|+++. ...++++|++.++.|.++.+
T Consensus 361 ~~~~~------------~~p---~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~~-~~~t~~ei~~~i~~l~~~l~ 422 (425)
T PRK08088 361 EDGDH------------SKP---NAKLTAQIVARARDKGLILLSCGPY--YNVLRILVP-LTIEDAQIRQGLEIIAQCFD 422 (425)
T ss_pred cCCCC------------CCC---CHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEECC-CCcCHHHHHHHHHHHHHHHH
Confidence 21000 000 0234567888888889765433222 367999984 46678899999999998876
Q ss_pred HH
Q 010125 510 AF 511 (517)
Q Consensus 510 ~l 511 (517)
.+
T Consensus 423 ~~ 424 (425)
T PRK08088 423 EA 424 (425)
T ss_pred hh
Confidence 53
No 313
>PRK12403 putative aminotransferase; Provisional
Probab=99.43 E-value=5.6e-10 Score=117.38 Aligned_cols=333 Identities=11% Similarity=0.004 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEE-eCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVY-GSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~-~s~~~H~s~~kaa~ 210 (517)
+..+.++.+.|+++++-..+ ..+|+++||+||..|+..||...... |. ..+.+|+ .....|-+..-+..
T Consensus 97 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AiklAr~~~~~~-g~--~~r~~ii~~~~~yHG~t~~~~s 166 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHYS-------HAIYTNSGSEANEVLIRTVRRYWQVL-GK--PQKKIMIGRWNGYHGSTLAATA 166 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhh-CC--CCCcEEEEECCCcCcccHhhhh
Confidence 44455666777777652211 57999999999999999998753211 21 1233333 33345766555555
Q ss_pred HcCCC--------CCCEEEEecCCC--CCcc--------cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----
Q 010125 211 IVGID--------VKNFRAIKTTKS--SSYG--------LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---- 268 (517)
Q Consensus 211 ~~G~g--------~~~v~~vp~d~~--~~~~--------~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---- 268 (517)
+.|.. ...+..+|.... ..+. .+.+.|++.+.+.. ...+.+|++.......|.+-|
T Consensus 167 ~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~y 244 (460)
T PRK12403 167 LGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPESY 244 (460)
T ss_pred cCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHHH
Confidence 54431 012344432100 0000 11355666664321 123456666666666688777
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCc-c
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNP-E 346 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~-~ 346 (517)
+++|.++|++||+.|++|.+++|+.-...-+....-|+ ..|.++ ..|.++..+ ..|+++++++ +.+.+.... .
T Consensus 245 l~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~--~gK~lggG~~Piga~v~~~~--i~~~~~~~~~~ 319 (460)
T PRK12403 245 WPEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLS--IAKGLTSGYVPMGGLVLSKR--IAEALVEQGGV 319 (460)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEE--EcccccccccceEEEEECHH--HHHHHhcCCCc
Confidence 99999999999999999999977643222111111234 368887 579998664 6788877643 223332111 1
Q ss_pred ccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHH-HHHHHHHHHHhcC-CCeEEecC--CCee
Q 010125 347 YLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHV-NMAKLFERLVSGD-KRFEIVFP--CHFA 422 (517)
Q Consensus 347 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~-~~a~~l~~~l~~~-~~~~l~~~--~~~~ 422 (517)
|+.. .|+ .+.+.......++|+.+-.++ .+++.. ++.++|++.|+++ ....++.. -...
T Consensus 320 ~~~~-------------~T~-~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 382 (460)
T PRK12403 320 FAHG-------------LTY-SGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGL 382 (460)
T ss_pred cccC-------------CCC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeEeecce
Confidence 1110 011 111122233444555554333 345553 5666666666432 11112211 1223
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWT 502 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~ 502 (517)
++.+.+..... +....... ......+.+.+.++|.+.... + ..+|++. ....+++||+++++
T Consensus 383 ~~gie~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~Gll~~~~----~-~~~~l~P-pl~it~~eid~~~~ 444 (460)
T PRK12403 383 VAALQFAEDKA----------TRKRFANE--NDLAWRCRTIGFEEGVIIRST----L-GRMIMAP-ALVAGRAEIDELVD 444 (460)
T ss_pred EEEEEEccCcc----------ccccccch--hHHHHHHHHHHHhCCEEEEec----C-CEEEEEC-CCCCCHHHHHHHHH
Confidence 34444432110 00000000 122345667778889755321 2 2478876 45678899999999
Q ss_pred HHHHHHHHHHhhcC
Q 010125 503 VVQQHLEAFQSAFK 516 (517)
Q Consensus 503 ~l~~~~~~l~~~~~ 516 (517)
++.++.+++.++-+
T Consensus 445 ~l~~al~~~~~~~~ 458 (460)
T PRK12403 445 KTRIAVDRTAREVG 458 (460)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999988876654
No 314
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.43 E-value=4.7e-10 Score=116.23 Aligned_cols=309 Identities=11% Similarity=0.062 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCe-EEEeCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKL-IVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~-~v~~s~~~H~s~~kaa~ 210 (517)
++...++.+.|.++.+.. + ...|+++||+||..|+..||.....+ |.. ..+. +|.....-|-...-+..
T Consensus 81 ~~~~~~la~~L~~~~~~~-~-------~v~f~~sGseA~e~AlklAr~~~~~~-g~~-~~r~~ii~~~~~yHG~t~~~~s 150 (408)
T PRK04612 81 SAPPLKLAEELVTASRFA-E-------KVFLCNSGTEANEAAIKLVRKWASSQ-GRP-ADKRVIVTFRGSFHGRTLAAVT 150 (408)
T ss_pred CHHHHHHHHHHHhhCCCC-C-------EEEEcCchHHHHHHHHHHHHHHHHhh-CCC-CCCcEEEEECCCcCCccHHHHH
Confidence 334456667777765322 1 57999999999999999999753221 210 0133 44444445544333333
Q ss_pred HcCCCC---------CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHH
Q 010125 211 IVGIDV---------KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAK 277 (517)
Q Consensus 211 ~~G~g~---------~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~ 277 (517)
..|-.. ..++.+|. -|++.|++++.. ..+.+|++.-.....|.+.| +++|.++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~ 218 (408)
T PRK04612 151 ATAQPKYQEGYEPLPGGFRYVDF-------NDVEALEAAMAG-----GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCD 218 (408)
T ss_pred hcCCcccccCCCCCCCCceEcCC-------CCHHHHHHhhCC-----CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 333210 01222221 178889888842 12344444433333344432 899999999
Q ss_pred HhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 278 QFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 278 ~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
+||+++++|.+|.++.....-+.....++ ..|.+ ++.|.++..+..|+++.++. +.+.+... ..
T Consensus 219 ~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pdi~--t~~K~l~~G~piga~~~~~~--~~~~~~~~----~~------- 282 (408)
T PRK04612 219 QHDALLVLDEIQCGMGRTGTLFAHWQEQV-TPDIV--TLAKALGGGFPIGAMLAGPK--VAETMQFG----AH------- 282 (408)
T ss_pred HcCCEEEEeccccCCCcCCchhhhhhcCC-CCCEE--EEcchhcCCCceEEEEECHH--HHhhhcCC----Cc-------
Confidence 99999999999987433211111110111 23444 45899987677888877643 22233211 00
Q ss_pred cccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCeeEEEEEecCCCcc
Q 010125 358 VVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVF--PCHFAVVCFRVSPSPVL 434 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~--~~~~~~v~f~~~~~~~~ 434 (517)
..++. +.+.....+..+++.+-. .+++++..++.++|.+.|+++. .+.++. .....++.+.+.+..
T Consensus 283 -----~~t~~-~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~-- 351 (408)
T PRK04612 283 -----GTTFG-GNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPAH-- 351 (408)
T ss_pred -----CCCCC-CCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCch--
Confidence 01111 222233344444544432 3466777778888888886631 122221 122333444443210
Q ss_pred hhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 435 MDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
......+.+.+.++|..... .|...+|++. ....+++||+++++.|.++..++.+
T Consensus 352 -------------------~~~a~~i~~~l~~~Gvlv~~----~g~~~lRl~P-pl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 352 -------------------AGQAGAILDLAAEHGLLLLQ----AGPDVLRFVP-ALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred -------------------hhHHHHHHHHHHHCCeEEee----CCCCEEEEcC-CccCCHHHHHHHHHHHHHHHHHHhh
Confidence 12245677778888975432 2446899987 5677889999999999998877643
No 315
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.42 E-value=2.4e-10 Score=118.78 Aligned_cols=313 Identities=11% Similarity=0.056 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEE-cCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
++...++.+.|.+++..+... ....+| +++||+||..|+..||... | ++.+|.....-|-...-+..
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~als 144 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGL----DYKVQFPGPTGTNAVESALKLARKVT----G----RSNVVSFTNAFHGMTLGSLS 144 (412)
T ss_pred cHHHHHHHHHHHHhccCccCC----CceEEEeCCCchHHHHHHHHHHhhhc----C----CCeEEEECCCcCCchHHHHH
Confidence 455556677777764322211 002445 5899999999999998751 1 22234444445543333333
Q ss_pred HcCC-------C--CCCEEEEecCCCCCc-ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc----cChhHHHHHH
Q 010125 211 IVGI-------D--VKNFRAIKTTKSSSY-GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV----DPLKPLCDVA 276 (517)
Q Consensus 211 ~~G~-------g--~~~v~~vp~d~~~~~-~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i----dpl~eI~~i~ 276 (517)
..|. | ...+..+|....... .-+++.+++.+.+.......+.+|++.-.....|.+ +-+++|.++|
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc 224 (412)
T TIGR02407 145 VTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLC 224 (412)
T ss_pred hcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHH
Confidence 3221 1 123455554210000 124777888886432111234566665555556664 3489999999
Q ss_pred HHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccc
Q 010125 277 KQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFA-TLDCCCLWVKDPRALVSSLSTNPEYLKNKATES 355 (517)
Q Consensus 277 ~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~ 355 (517)
++||+++++|+.+.|+.....-+.....++ ..|.++++ |+++. .+..|++++++.. ..+. .....
T Consensus 225 ~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~~---~~~~--~~~~~------ 290 (412)
T TIGR02407 225 RRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCLS--KSISGYGLPLALTLIKPEL---DVWK--PGEHN------ 290 (412)
T ss_pred HHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEec--hhccCCccceeEEEEchhh---hccC--CCccC------
Confidence 999999999999986532111111111233 57877754 99986 7789999987542 2221 00000
Q ss_pred cccccCCCccccCCCCCCchHHHHHHHH-hcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCC-CeeEEEEEec
Q 010125 356 MQVVDYKDWQITLSRRFRSLKLWFVIRN-YGVANLRHFLRSHVNMAKLFERLVS----GDKRFEIVFPC-HFAVVCFRVS 429 (517)
Q Consensus 356 ~~~~~~~~~~~~~sr~~~al~~~~~l~~-~g~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~l~~~~-~~~~v~f~~~ 429 (517)
.++. +.........++++. +..+. ..++..++.+++++.++ +.+++. ...+ ...++.+.+.
T Consensus 291 --------~T~~-gnpl~~aaa~a~l~~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~~~~-~~vrg~Gl~~~l~l~ 357 (412)
T TIGR02407 291 --------GTFR-GNNLAFVTATAALEYYWSDDA---FEKAVQRKSEIIQERLDRIVAEYPELI-KQVRGRGLMQGIECG 357 (412)
T ss_pred --------CCCC-ccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHhhCCCce-EeeecceeEEEEEec
Confidence 0110 111111133445553 43333 33445555666666554 344332 2122 2334455553
Q ss_pred CCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 430 PSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
+. ....++.+.+.++|.++. +... +...+|++. ....+++|++++++.|.++.+
T Consensus 358 ~~-----------------------~~~~~~~~~~~~~Gv~v~-~~~~-~~~~lr~~p-~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 358 DG-----------------------DLAGKIAKAAFENGLIIE-TSGP-NDEVIKLLP-PLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred Ch-----------------------HHHHHHHHHHHHCCCEEe-ccCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHh
Confidence 21 234677888888897543 2221 235799998 567888999999999988764
No 316
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.42 E-value=4.4e-10 Score=117.21 Aligned_cols=310 Identities=14% Similarity=0.043 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC-
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG- 213 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G- 213 (517)
+.++.+.|.+++.-... ...+|+++||+|+..|+..||... | .+.+|.....-|-...-+..+.|
T Consensus 78 ~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~~~~~~ 143 (420)
T TIGR00700 78 YVALAEKLNRIAPGSGP------KKSVFFNSGAEAVENAVKIARSYT----G----RPGVVAFDHGFHGRTNMTMALTAK 143 (420)
T ss_pred HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhc----C----CCcEEEECCCcCCCcHHHHHhcCC
Confidence 44566677776532111 157999999999999999998752 1 22244455455543333333322
Q ss_pred -------CC--CCCEEEEecCCC---------CCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhH
Q 010125 214 -------ID--VKNFRAIKTTKS---------SSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKP 271 (517)
Q Consensus 214 -------~g--~~~v~~vp~d~~---------~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~e 271 (517)
.+ ...+..+|.... ..+.-+++.+++.+.... .+....+|++.-....+|.+-| +++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~Epi~g~~G~~~~~~~~l~~ 222 (420)
T TIGR00700 144 VMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDV-GANNVAALVIEPVQGEGGFIVPAKGFVPA 222 (420)
T ss_pred CcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhc-CCCcEEEEEECCccCCCCCccCCHHHHHH
Confidence 11 123444443100 000112556777664221 1234556777665556677655 999
Q ss_pred HHHHHHHhCCeEEcccccccccccCcccccc-ccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCC
Q 010125 272 LCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKN 350 (517)
Q Consensus 272 I~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~ 350 (517)
|.++|++||+++++|..|.++..... +... ..++ ..|.++ +.|.++..+..|+++.++. +.+.+... ...
T Consensus 223 l~~lc~~~gillI~DEV~tg~gr~g~-~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~--i~~~~~~~--~~~- 293 (420)
T TIGR00700 223 LLDWCREHGIVFIADEVQTGFARTGA-MFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE--IMDAPAPG--GLG- 293 (420)
T ss_pred HHHHHHHcCCEEEEEecccCCcccch-hHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH--HHhhcCCC--CcC-
Confidence 99999999999999999987643221 1110 1122 467655 6899987788999888643 22222210 000
Q ss_pred ccccccccccCCCccccCCCCCCchHHHHH---HHHhcHHHHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeE
Q 010125 351 KATESMQVVDYKDWQITLSRRFRSLKLWFV---IRNYGVANLRHFLRSHVNMAKLFERLVS----GDKRFEIVFPCHFAV 423 (517)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~---l~~~g~~g~~~~i~~~~~~a~~l~~~l~----~~~~~~l~~~~~~~~ 423 (517)
.++ ...++...++ ++.+..+.+.+ +..++.+++++.|+ +.|.+.-+ .+...+
T Consensus 294 -------------~T~----~~~pl~~aaa~a~l~~l~~~~~~~---~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~~ 352 (420)
T TIGR00700 294 -------------GTY----AGNPLACAAALAVLAIIESEGLIE---RARQIGRLVTDRLTTLKAVDPRIGDV-RGLGAM 352 (420)
T ss_pred -------------CCC----CcCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHHHHhhCCCEEEe-eccceE
Confidence 011 1133443334 55444444443 33344444544443 34444333 233445
Q ss_pred EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 010125 424 VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTV 503 (517)
Q Consensus 424 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~ 503 (517)
+.+.+..... ... ......++.+.+.++|.+..+...+ + .++|+++. ...++++|++++++
T Consensus 353 ~~i~~~~~~~-------------~~~---~~~~~~~l~~~~~~~Gv~i~p~~~f-~-~~lRl~p~-l~~~~~~l~~~~~~ 413 (420)
T TIGR00700 353 IAVELVDPGT-------------TEP---DAGLAERIATAAHAAGLLLLTCGMF-G-NIIRFLPP-LTIGDELLSEGLDI 413 (420)
T ss_pred EEEEEecCCC-------------CCc---cHHHHHHHHHHHHHCCeEEeccCCC-C-CEEEEECC-CCcCHHHHHHHHHH
Confidence 5555532200 000 0234567788888889765443322 2 58999973 34678899999999
Q ss_pred HHHHH
Q 010125 504 VQQHL 508 (517)
Q Consensus 504 l~~~~ 508 (517)
|.++.
T Consensus 414 l~~~l 418 (420)
T TIGR00700 414 LCAIL 418 (420)
T ss_pred HHHHh
Confidence 98775
No 317
>PRK06541 hypothetical protein; Provisional
Probab=99.42 E-value=5.7e-10 Score=117.24 Aligned_cols=332 Identities=10% Similarity=0.015 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
+...++.+.|.+++.-+- ...+|+++||+|+..|+..||..... .|..+ ...+|.....-|-...-+..+.
T Consensus 95 ~~~~~la~~l~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~~a~s~~ 165 (460)
T PRK06541 95 PPAIELAERLAALAPGDL-------NRVFFTTGGSEAVESAWKLAKQYFKL-TGKPG-KHKVISRAIAYHGTTQGALAIT 165 (460)
T ss_pred HHHHHHHHHHHHhCCCCc-------CEEEEcCCcHHHHHHHHHHHHHHHHh-cCCCC-ccEEEEEcCcccCcchhhhcCc
Confidence 344456667777653211 25799999999999999999875311 12111 2233444444554433333332
Q ss_pred CCC---------CCCEEEEecCCCCC---cccC--------HHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----
Q 010125 213 GID---------VKNFRAIKTTKSSS---YGLS--------PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---- 268 (517)
Q Consensus 213 G~g---------~~~v~~vp~d~~~~---~~~d--------~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---- 268 (517)
|.. ...+..+|....-. +.-+ ++.|++.++.. ....+.+|++.-.....|.+-|
T Consensus 166 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~y 243 (460)
T PRK06541 166 GLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGY 243 (460)
T ss_pred CChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHH
Confidence 211 11234444321000 1112 35677777532 1123456666655777888888
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCc-c
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNP-E 346 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~-~ 346 (517)
+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.++ +.|.++..+ ..|.++++++. .+.+.... .
T Consensus 244 l~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt--~gK~l~~G~~pigav~~~~~i--~~~~~~~~~~ 318 (460)
T PRK06541 244 FERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIIT--CAKGITSGYSPLGAMIASDRL--FEPFLDGPTM 318 (460)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEE--ecccccCCccceeEEEEcHHH--HHHhhcCCCc
Confidence 99999999999999999999966533222111111233 478776 689998655 67888876542 22232111 1
Q ss_pred ccCCccccccccccCCCccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCe
Q 010125 347 YLKNKATESMQVVDYKDWQITLSRRFRSLKLW---FVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVF--PCHF 421 (517)
Q Consensus 347 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~--~~~~ 421 (517)
++. ..+-...++.+. ++++.+..+ +..++..++.++|.+.|+++....++. ....
T Consensus 319 ~~~-----------------~~T~~gnp~~~aaala~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~G 378 (460)
T PRK06541 319 FLH-----------------GYTFGGHPVSAAVALANLDIFERE---GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDG 378 (460)
T ss_pred ccc-----------------CCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence 110 011112233333 334443333 355777788889888887753221211 1223
Q ss_pred eEEEEEecCCCcchhhhhhhhhccccchHHHHH-HHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHH
Q 010125 422 AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQIN-EFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVA 500 (517)
Q Consensus 422 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l 500 (517)
.++.+.+..... +.........+ .....+.+.+.++|.+. .+. ..|..++|++.. ...+++||+++
T Consensus 379 l~~~ie~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~-~~~-~~g~~~lrl~Pp-l~~t~~~id~~ 445 (460)
T PRK06541 379 YFYGIELVKDKA----------TKETFTDDESERLLRGFLSPALFEAGLYC-RAD-DRGDPVVQLAPP-LISGQEEFDEI 445 (460)
T ss_pred eEEEEEEecCcc----------cccCCcchhhhhhHHHHHHHHHHhCCeEE-Eec-CCCCCEEEEECC-CCCCHHHHHHH
Confidence 344444432100 00000000011 12245677888888654 331 234467999974 56788899999
Q ss_pred HHHHHHHHHHHHh
Q 010125 501 WTVVQQHLEAFQS 513 (517)
Q Consensus 501 ~~~l~~~~~~l~~ 513 (517)
+++|.++.+++.+
T Consensus 446 ~~~l~~~l~~~~~ 458 (460)
T PRK06541 446 EQILRSVLTEAWA 458 (460)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999877643
No 318
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.42 E-value=7.2e-10 Score=115.99 Aligned_cols=321 Identities=13% Similarity=0.062 Sum_probs=176.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+..+.++.+.|.++++...+ ..+|+++||||+..|+..||... | .+.++-....-|-...-+...
T Consensus 83 ~~~~~~la~~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~a~s~ 147 (443)
T PRK08360 83 PVEPLLLAEKLIEIAPGDNP-------KVSFGLSGSDANDGAIKFARAYT----K----RRKILSYLRSYYGSTYGAMSL 147 (443)
T ss_pred cHHHHHHHHHHHHhCCCCCC-------EEEEcCCHHHHHHHHHHHHHHhc----C----CCeEEEEeCCcCCcCHHHHHh
Confidence 34455667778887653322 57999999999999999998752 1 222333333445333333333
Q ss_pred cCCC---------CCCEEEEecCCCCC--cc--------cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----
Q 010125 212 VGID---------VKNFRAIKTTKSSS--YG--------LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---- 268 (517)
Q Consensus 212 ~G~g---------~~~v~~vp~d~~~~--~~--------~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---- 268 (517)
.|.. ...+..+|...... +. -+++.++++++... .+..+.+|++.-..+++|.+-|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~ 226 (443)
T PRK08360 148 TGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDY 226 (443)
T ss_pred cCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHH
Confidence 3321 11344554421000 00 12445666664321 1234556777666677887755
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCcccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYL 348 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl 348 (517)
+++|.++|++||+++++|.+|.++......+.....++ ..|.+++ .|.++..+..|+++.+++ +.+.+... .+.
T Consensus 227 l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~~--i~~~~~~~-~~~ 300 (443)
T PRK08360 227 FKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRAE--IMDSLPPL-AHA 300 (443)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcHH--HHhhhcCC-CCC
Confidence 89999999999999999999987543221111111133 3576655 899987677888887533 22233210 000
Q ss_pred CCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCeeEEE
Q 010125 349 KNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVF--PCHFAVVC 425 (517)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~--~~~~~~v~ 425 (517)
.+.. +.........++++.+..+ +.+++..++.++|++.|+++. .+.++. .....++.
T Consensus 301 ---------------~T~~-~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrg~Gl~~g 361 (443)
T PRK08360 301 ---------------FTLS-GNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIG 361 (443)
T ss_pred ---------------CCCC-cCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEE
Confidence 0111 1111223344455544333 345666677777777775431 111111 12233444
Q ss_pred EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 426 FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 426 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
+.+..... .+.. + ......+.+++.++|.+. ... +...+|++. ....+++||+++++++.
T Consensus 362 ie~~~~~~----------~~~~-~----~~~~~~~~~~l~~~Gi~~-~~~---~~~~lr~~P-~l~~t~~~id~~~~~l~ 421 (443)
T PRK08360 362 VDLVKDRE----------TKER-A----YEEAAKVVWRAWELGLIV-TFF---SGNVLRIQP-PLTIEKEVLDEGLDILE 421 (443)
T ss_pred EEEecCCc----------ccCc-c----HHHHHHHHHHHHHCCeEE-eec---CCCEEEEeC-CCCCCHHHHHHHHHHHH
Confidence 44432100 0000 0 123456777888889643 321 236799987 46778899999999999
Q ss_pred HHHHHHHh
Q 010125 506 QHLEAFQS 513 (517)
Q Consensus 506 ~~~~~l~~ 513 (517)
++.+.+.+
T Consensus 422 ~~l~~~~~ 429 (443)
T PRK08360 422 EAIEDVEE 429 (443)
T ss_pred HHHHHHHh
Confidence 99877653
No 319
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=1.1e-09 Score=114.73 Aligned_cols=315 Identities=12% Similarity=0.047 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+..+.++.+.|.+++.-+.. ....|+++||+||..|+..||... | .+.+|.....-|-...-+..+
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~------~~v~f~~SGsEA~e~AlklAr~~t----g----r~~Ii~~~~~yHG~t~~~ls~ 161 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFE------KKVFFTNSGTESNEAAIKIARYHT----G----RKYIIAFLGAFHGRTYGSLSL 161 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHHh----C----CCeEEEECCCcCCccHHHHHh
Confidence 44556777888887642111 157999999999999999998652 1 223344444455433333333
Q ss_pred cCC----------CCCCEEEEecCCCCCcc-------------cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC
Q 010125 212 VGI----------DVKNFRAIKTTKSSSYG-------------LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP 268 (517)
Q Consensus 212 ~G~----------g~~~v~~vp~d~~~~~~-------------~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp 268 (517)
.|- ....+..+|... .++ -+++.+++.+.+....+..+.+|++.......|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~ 239 (441)
T PRK05769 162 TASKPVQRKGFFPLMPGVIHVPYPN--PYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVP 239 (441)
T ss_pred cCCCcccccCCCCCCCCeEEeCCCc--cccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCC
Confidence 221 012345555421 011 1133455533221111234556776666666788878
Q ss_pred ----hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCC
Q 010125 269 ----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTN 344 (517)
Q Consensus 269 ----l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~ 344 (517)
+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ .|.++..++.|+++.++.- . ..+.
T Consensus 240 ~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~--~K~l~~G~p~gav~~~~~i-~-~~~~-- 312 (441)
T PRK05769 240 PKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITL--AKAIAGGLPLGAVIGRAEL-M-FLPP-- 312 (441)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEE--cccccCCcccEEEEEehhh-h-hcCC--
Confidence 99999999999999999999986432221111111133 4688775 5888776778888876442 1 1110
Q ss_pred ccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--Ce
Q 010125 345 PEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HF 421 (517)
Q Consensus 345 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~ 421 (517)
.... .++. +.........++++.+.. +.+++..++.++|++.|+++. .+.++... ..
T Consensus 313 -~~~~--------------~T~~-g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~G 372 (441)
T PRK05769 313 -GSHA--------------NTFG-GNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGLG 372 (441)
T ss_pred -CCCC--------------CCCC-cCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecce
Confidence 0000 0111 111122333444444422 556777778888888876531 12222121 12
Q ss_pred eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHH
Q 010125 422 AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAW 501 (517)
Q Consensus 422 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~ 501 (517)
.++.+.+..... +........+.+.+.++|.+. .+ .+...+|++. ....+++||++++
T Consensus 373 ~~~~i~~~~~~~-----------------~~~~~~~~~~~~~~~~~Gil~-~~---~~~~~lr~~p-~l~~t~~~id~~~ 430 (441)
T PRK05769 373 LMIGVELVKDRK-----------------EPDPKLRDKVLYEAFKRGLLL-LG---AGKSAIRIIP-PLIITEEEADIGL 430 (441)
T ss_pred EEEEEEeccCCc-----------------cccHHHHHHHHHHHHhCCcEE-ec---CCCCEEEEeC-CCCCCHHHHHHHH
Confidence 344444432200 000234566777788889654 22 2346799997 4567888999999
Q ss_pred HHHHHHHHHH
Q 010125 502 TVVQQHLEAF 511 (517)
Q Consensus 502 ~~l~~~~~~l 511 (517)
+++.++.+++
T Consensus 431 ~~l~~~l~~~ 440 (441)
T PRK05769 431 EILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHh
Confidence 9999987654
No 320
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.41 E-value=3.9e-11 Score=122.75 Aligned_cols=330 Identities=15% Similarity=0.136 Sum_probs=206.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEc-CCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH
Q 010125 127 SSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ-GTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL 205 (517)
Q Consensus 127 ~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~ 205 (517)
+..+..++-.++.+||+++.|++.- .|. ++|..+-..+|.+.|.... ..|.. .+-+.+++-.+|-..
T Consensus 576 QaqGY~~lf~~Le~~Lc~iTG~D~~---------s~QPNsGA~GEYaGL~~IRaY~~-~kge~--hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 576 QAQGYQQLFTELEKDLCEITGFDSF---------SLQPNSGAQGEYAGLRVIRAYLE-SKGEG--HRNVCLIPVSAHGTN 643 (1001)
T ss_pred HHhhHHHHHHHHHHHhheeecccce---------eecCCCCcccchhhHHHHHHHHH-hccCC--cceeEEEeecccCCC
Confidence 3456777888888999999999742 233 3344445556666555432 22443 667788888899999
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC-hhHHHHHHHHhCCeEE
Q 010125 206 QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP-LKPLCDVAKQFGIWVH 284 (517)
Q Consensus 206 ~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp-l~eI~~i~~~~gi~lh 284 (517)
...|.++|. +|+.|.++. +|.+|+.+|+...++...+ -.++.+|.++| .|.+.+ +++++++.++||--+.
T Consensus 644 PASA~Magm---kvvpV~~~~--~G~id~~dLk~kaekh~~~---Laa~MvTYPST-~GvfE~~i~d~cd~iHehGGQVY 714 (1001)
T KOG2040|consen 644 PASAAMAGM---KVVPVGCDA--NGNIDMVDLKAKAEKHKDN---LAALMVTYPST-HGVFEEGIDDICDIIHEHGGQVY 714 (1001)
T ss_pred hhhHHhcCC---EEEEeeccC--CCCccHHHHHHHHHHhhhh---hheeEEecccc-cccccccHHHHHHHHHhcCCEEE
Confidence 999999999 999998875 6799999999988776543 34788899987 588865 9999999999999999
Q ss_pred cccccccccc-cCccccccccCCCCCCeeeeccccccCCCCcceE-----EEEeCchhHHhhhcCCccccCCccccccc-
Q 010125 285 VDAAYAGSAC-ICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCC-----LWVKDPRALVSSLSTNPEYLKNKATESMQ- 357 (517)
Q Consensus 285 vDaA~g~~~~-~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~-----l~~~~~~~~~~~~~~~~~yl~~~~~~~~~- 357 (517)
.|||.=-... ++ -.|--++|+--.+.||++..|.|.|. +-+|.. + ++||.....-+..
T Consensus 715 lDGANMNAqVGlc------~pGd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~H--L-------apfLP~HpVvs~~~ 779 (1001)
T KOG2040|consen 715 LDGANMNAQVGLC------RPGDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--L-------APFLPSHPVVSPGR 779 (1001)
T ss_pred ecCCCccceeccc------CCccccccceeecccceeeecCCCCCCCCCccchhhh--c-------cccCCCCCccCCCC
Confidence 9997522111 11 11223899999999999988866543 433321 1 3344321110000
Q ss_pred cccCCCccccCCCCC-Cc--h-HHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEE--EEecCC
Q 010125 358 VVDYKDWQITLSRRF-RS--L-KLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVC--FRVSPS 431 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~-~a--l-~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~--f~~~~~ 431 (517)
..+-...+--.+-++ .+ + --|+.++.+|..|++..-+-.+-+|.|+.++|+.. .+++.....+.|. |.+.-
T Consensus 780 ~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~- 856 (1001)
T KOG2040|consen 780 PEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDL- 856 (1001)
T ss_pred CCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeec-
Confidence 000000000011111 11 2 34899999999999999999999999999999875 5555433333332 33221
Q ss_pred CcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 432 PVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
|.++. .. +.-...+.++|++.|.-..+. .|.=.+.+=+-.+ ...+++++|++.+++..+.+++
T Consensus 857 --r~fK~--------~a-----gieavDvAKRL~DYgFHaPTm-swPV~gtLMIEPT-ESE~k~ElDRfcdAliSIreEI 919 (1001)
T KOG2040|consen 857 --RPFKK--------TA-----GIEAVDVAKRLMDYGFHAPTM-SWPVAGTLMIEPT-ESEDKAELDRFCDALISIREEI 919 (1001)
T ss_pred --hhhcc--------cc-----CCcHHHHHHHHHhccCCCCcc-ccccCCceEeccC-ccccHHHHHHHHHHHHHHHHHH
Confidence 11111 00 111345667787878532111 1211122333332 2446689999999998887776
Q ss_pred H
Q 010125 512 Q 512 (517)
Q Consensus 512 ~ 512 (517)
.
T Consensus 920 ~ 920 (1001)
T KOG2040|consen 920 A 920 (1001)
T ss_pred H
Confidence 5
No 321
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.40 E-value=8e-10 Score=115.96 Aligned_cols=318 Identities=11% Similarity=0.025 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
.+...++.+.|++++..... ...+|+++||+|+..|+..||... | ++.+|.....-|-...-+..+
T Consensus 98 ~~~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~al~~ 163 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHE------KRSALFNSGAEAVENAVKIARSYT----G----RQAVVVFDHAYHGRTNLTMAL 163 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhh----C----CCeEEEECCCcCcChHHHHhh
Confidence 34555677888887643211 146889999999999999998752 1 222344444455444334333
Q ss_pred cCC--------C--CCCEEEEecCC-CCC---cccC-HHHHHHHHHHhHh--cCCcceEEEeeccCCccccccC----hh
Q 010125 212 VGI--------D--VKNFRAIKTTK-SSS---YGLS-PDSLMAQINSDVE--VGLIPLFLCATIGTTAITAVDP----LK 270 (517)
Q Consensus 212 ~G~--------g--~~~v~~vp~d~-~~~---~~~d-~~~Le~~i~~~~~--~g~~p~~vv~t~gtt~~G~idp----l~ 270 (517)
.+. + ...+..+|... ..+ ...+ .+.+++.++.-.+ .+..+.+|++.-.....|.+-| ++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~ 243 (443)
T PRK06058 164 TAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLP 243 (443)
T ss_pred cCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHH
Confidence 321 1 11234443211 000 0011 1222222221111 1123445665554444565544 99
Q ss_pred HHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCC
Q 010125 271 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKN 350 (517)
Q Consensus 271 eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~ 350 (517)
+|.++|++||+.+++|..+.|+......+.....++ ..|.+++ -|.++..+..|+++.+++ +.+.+... ...
T Consensus 244 ~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~--gK~l~~G~Pi~av~~~~~--i~~~~~~~--~~~- 315 (443)
T PRK06058 244 ALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITT--AKGIAGGLPLSAVTGRAE--IMDAPHPG--GLG- 315 (443)
T ss_pred HHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEE--cccccCCCccEEEEEcHH--HHhhccCC--CCC-
Confidence 999999999999999999987643221111111233 4688887 499987788999888643 22222110 000
Q ss_pred ccccccccccCCCccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCeeEE
Q 010125 351 KATESMQVVDYKDWQITLSRRFRSLKLWF---VIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVF--PCHFAVV 424 (517)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~--~~~~~~v 424 (517)
.+ -...++...+ +++.+..+ ++.++..++.++|.+.|+++. ...++. .....++
T Consensus 316 -------------~T----~~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~ 375 (443)
T PRK06058 316 -------------GT----YGGNPVACAAALAAIETIEED---DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMI 375 (443)
T ss_pred -------------CC----CCCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEE
Confidence 01 1123333333 44443333 455666677788888876531 122221 2333445
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.+.+.+... ... .......+.+.+.++|.+......+ ..+||+.. ....++++|++++++|
T Consensus 376 ~i~~~~~~~-------------~~~---~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~lr~~P-pl~~t~~~i~~~~~~l 436 (443)
T PRK06058 376 AIELVKPGT-------------TEP---DAELTKALAAAAHAAGVIVLTCGTY--GNVIRLLP-PLVIGDELLREGLDVL 436 (443)
T ss_pred EEEEecCCC-------------CCC---cHHHHHHHHHHHHHCCeEEeccCCC--CCEEEEEC-CCccCHHHHHHHHHHH
Confidence 555533210 000 0234567788888889754332222 25799987 4567888999999999
Q ss_pred HHHHHH
Q 010125 505 QQHLEA 510 (517)
Q Consensus 505 ~~~~~~ 510 (517)
.++.++
T Consensus 437 ~~~l~~ 442 (443)
T PRK06058 437 EAALAD 442 (443)
T ss_pred HHHHHh
Confidence 988764
No 322
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.39 E-value=6.6e-10 Score=113.60 Aligned_cols=320 Identities=11% Similarity=0.004 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG 213 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G 213 (517)
...++++.|.+++.-+. ..-.+|+++||+||-.|+..||... | ...+|-....-|-...-+..+.|
T Consensus 100 ~~v~~ae~L~~~~p~~~------~~~~~f~~sGaeA~E~AiKiAr~~T----g----r~~viaf~~afHG~T~galslT~ 165 (447)
T COG0160 100 PYVELAEKLTALAPGSG------LKKVFFGNSGAEAVEAAIKIARAYT----G----RPGVIAFDGAFHGRTLGALSLTG 165 (447)
T ss_pred hHHHHHHHHHHhCCccc------CCeEEecCCcHHHHHHHHHHHHHHh----C----CCcEEEECCcccccchhhHHhcc
Confidence 33445555666554321 1257999999999999999999763 1 23344455556654444444432
Q ss_pred --------CC--CCCEEEEecCCC--CC--------cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----h
Q 010125 214 --------ID--VKNFRAIKTTKS--SS--------YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----L 269 (517)
Q Consensus 214 --------~g--~~~v~~vp~d~~--~~--------~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l 269 (517)
.| ...|..+|.... +. +.-..+.+++.|.+.......|.++++.-.....|.+.| +
T Consensus 166 ~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl 245 (447)
T COG0160 166 SKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFL 245 (447)
T ss_pred CccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHH
Confidence 11 123677775321 00 122445566666666555667888888888888888755 8
Q ss_pred hHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccC
Q 010125 270 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLK 349 (517)
Q Consensus 270 ~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~ 349 (517)
+++.++|++||+.+++|..+.|+.....-+..--.|+ ..|.+|++ |.++.....|.++.|..-. ... +.-..
T Consensus 246 ~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~ei~--~~~---~g~~~ 317 (447)
T COG0160 246 KALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAEIM--DWP---PGGHG 317 (447)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHHhc--ccC---CcccC
Confidence 9999999999999999999988765432111111234 67888864 8888888888888764321 111 11000
Q ss_pred CccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCCCe--eEEEE
Q 010125 350 NKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPCHF--AVVCF 426 (517)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~~~--~~v~f 426 (517)
.+ -.+.+..+.+..++++.+-.+ +++++..++.+++++.|.++. .+.++..... -++-.
T Consensus 318 --------------~T-f~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~gi 379 (447)
T COG0160 318 --------------GT-FGGNPVACAAALAVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGV 379 (447)
T ss_pred --------------CC-CCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEE
Confidence 01 112222233334445544344 566777788888888886531 2434544331 22333
Q ss_pred EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 427 RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
.+..+.- ++. ...+...++.+++.++|.+..+.... .++||+.. -...+++++|..+++|.+
T Consensus 380 E~v~d~~------t~~---------p~~~~~~~i~~~~~~~Glil~~~G~~--~nviRi~P-PL~is~e~~d~~l~il~~ 441 (447)
T COG0160 380 ELVKDRD------TKE---------PDAELAAKIVARAFERGLLLLTCGPH--GNVLRILP-PLTISDEELDEGLDILEE 441 (447)
T ss_pred EEecCCC------CCC---------CCHHHHHHHHHHHHHcCCEEeccCCC--CcEEEEeC-CcccCHHHHHHHHHHHHH
Confidence 3332100 000 01356788889999999876554432 46899987 456788899999999998
Q ss_pred HHHHH
Q 010125 507 HLEAF 511 (517)
Q Consensus 507 ~~~~l 511 (517)
+.+++
T Consensus 442 al~~~ 446 (447)
T COG0160 442 ALKEA 446 (447)
T ss_pred HHHhh
Confidence 87654
No 323
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.38 E-value=2.8e-10 Score=115.10 Aligned_cols=352 Identities=14% Similarity=0.076 Sum_probs=186.8
Q ss_pred CccceeCCCCCC-hH--HHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHH
Q 010125 94 PNYFAYFPSSGS-IA--GFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAI 170 (517)
Q Consensus 94 p~~~~~~~~~~~-~~--~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~ 170 (517)
..|.+....+.+ .| .+.+.|. + ....|..+|....||+.+. +++|++ .+++|..|+.++
T Consensus 41 dV~IDLrSDTgT~apS~~m~aAM~----~-GDD~Y~gdpSv~~Lee~va----el~G~E---------~alpthqGRgaE 102 (467)
T TIGR02617 41 DVFIDLLTDSGTGAVTQSMQAAMM----R-GDEAYSGSRSYYALAESVK----NIFGYQ---------YTIPTHQGRGAE 102 (467)
T ss_pred CeEEECccCCCCCCCCHHHHHHHH----c-CCcccccCchHHHHHHHHH----HHhCCc---------eEEECCCCchHH
Confidence 356777654443 23 2223232 2 4457899999999987655 566765 468898999999
Q ss_pred HHHHHHHHHHHHHHhcccCC-CCeEEEeCCCCchHHH-HHHHHcCCCCCCEEEEecC--------CCCCcccCHHHHHHH
Q 010125 171 LCTLTAARDRVLNKIGRENI-SKLIVYGSDQTHCALQ-KAAQIVGIDVKNFRAIKTT--------KSSSYGLSPDSLMAQ 240 (517)
Q Consensus 171 ~~al~~ar~~~~~~~g~~~~-~~~~v~~s~~~H~s~~-kaa~~~G~g~~~v~~vp~d--------~~~~~~~d~~~Le~~ 240 (517)
..+..+.... .|.+.. ...-.+++...|+--. -.+.+.|+ .++.++.+ ...+|.||++.|+++
T Consensus 103 ~Il~~~~~~~----~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~ 175 (467)
T TIGR02617 103 QIYIPVLIKK----REQEKGLDRSKMVAFSNYFFDTTQGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLERG 175 (467)
T ss_pred HHHHHhhccc----ccccccccccccccceEEEEecchHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHHH
Confidence 8776655331 011100 0000023334555433 35667787 66665432 112579999999999
Q ss_pred HHHhHhcCCcceEEEeecc-CCccccc---cChhHHHHHHHHhCCeEEcccccccc-cccCcc---------ccccc-cC
Q 010125 241 INSDVEVGLIPLFLCATIG-TTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGS-ACICPE---------FRHFI-DG 305 (517)
Q Consensus 241 i~~~~~~g~~p~~vv~t~g-tt~~G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~-~~~~~~---------~~~~~-~g 305 (517)
|++.-. ...++ +..+.. ++.-|.. +.+.++.++|++||+.+|+|||.-.- +.+... .+... .-
T Consensus 176 I~~~g~-~~i~~-v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~ 253 (467)
T TIGR02617 176 IEEVGP-NNVPY-IVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRET 253 (467)
T ss_pred HhhcCC-CCcee-eeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHh
Confidence 986421 12233 333332 3333543 67889999999999999999986432 222111 01111 01
Q ss_pred CCCCCeeeeccccccCCCCcceEEEEeCc---hhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHH
Q 010125 306 VEGADSFSLNAHKWFFATLDCCCLWVKDP---RALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIR 382 (517)
Q Consensus 306 ~~~aDsi~~~~hK~l~~p~~~g~l~~~~~---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~ 382 (517)
...+|++++|+.|-+++|.| |++..+++ +.+.+.-.....|= +..-|+ =-.+|-..+++ ..|+
T Consensus 254 ~~~aDsvt~slsKglgApvG-g~Lag~d~~~~~l~~~~~~~~i~~E--------Gf~tYG---Glagrd~ea~a--~Gl~ 319 (467)
T TIGR02617 254 YKYADMLAMSAKKDAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQE--------GFPTYG---GLEGGAMERLA--VGLY 319 (467)
T ss_pred hccCCEEEEEcCCCCCCccc-ceEEecchhHHHHHHHHHhhccccc--------CCcCcC---chhHHHHHHHH--hhhh
Confidence 25899999999999999974 45555665 33332211111110 011111 00112222221 1222
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEE----ecCCCcchhhhhhhhhccccchHHHHHHHHH
Q 010125 383 NYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFR----VSPSPVLMDKLKTKYVNCLLSEEEQINEFNR 458 (517)
Q Consensus 383 ~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 458 (517)
.. --.+.+++.....+||.+.|.+. |+.++. +. +--+|. +.|. ...+ .--.+
T Consensus 320 e~---~~~~yl~~ri~qv~yl~~~L~~~-Gvpi~~-~G-ghav~iDa~~~lph----------------ip~~--~fpa~ 375 (467)
T TIGR02617 320 DG---MNLDWLAYRINQVQYLVNGLEEI-GVVCQQ-AG-GHAAFVDAGKLLPH----------------IPAD--QFPAH 375 (467)
T ss_pred hc---ccHHHHHHHHHHHHHHHHHHHhC-CCcEEe-cC-ccEEEEehhhhCCC----------------CChh--hCcHH
Confidence 21 12345667777889999999886 776664 32 223332 1111 0000 01123
Q ss_pred HHHHHHH-hcCcEEEeeeeE-------------CCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 459 ELLESIN-ASGKAYMTHAVL-------------GGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 459 ~l~~~l~-~~g~~~~~~~~~-------------~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.|.-.|. +.|+=.+....+ ..--.+|+++---.-|.+++|.+.+++..+.++
T Consensus 376 al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 376 ALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred HHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 3333332 334311111111 012478999843344667999999999888654
No 324
>PLN00144 acetylornithine transaminase
Probab=99.37 E-value=9.2e-10 Score=113.26 Aligned_cols=303 Identities=13% Similarity=0.042 Sum_probs=165.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCC------CCeEEEeCCCCchHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENI------SKLIVYGSDQTHCAL 205 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~------~~~~v~~s~~~H~s~ 205 (517)
+..+.++.+.|.++.+.+ ..+|+++||+|+..|+..||....++ +.... ...+|.+...-|-..
T Consensus 56 ~~~~~~la~~l~~~~~~~---------~v~f~~sGseA~e~AlklAr~~~~~~-~~~~~~~~~~~r~~ii~~~~~yHG~t 125 (382)
T PLN00144 56 TIPQVELAKRLVASSFAD---------RVFFCNSGTEANEAAIKFARKYQRVR-APDKKDPAASSATEFVSFSNSFHGRT 125 (382)
T ss_pred CHHHHHHHHHHHhcCCCC---------eEEEeCCcHHHHHHHHHHHHHHHhcc-CCCCccccccccceEEEECCCccccc
Confidence 334456667777765322 57999999999999999998753221 11000 123444554455433
Q ss_pred HHHHHHcCCC---------CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc--cC--hhHH
Q 010125 206 QKAAQIVGID---------VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV--DP--LKPL 272 (517)
Q Consensus 206 ~kaa~~~G~g---------~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i--dp--l~eI 272 (517)
.-+..+.+-. ...+..+|. -|+++|++.+... .+.+|++.-..++.|.+ ++ +++|
T Consensus 126 ~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~-----~~aavi~eP~q~~gg~~~~~~~~~~~l 193 (382)
T PLN00144 126 LGALALTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQKG-----KTAAVFVEPVQGEGGIYPATKEFLQGL 193 (382)
T ss_pred HHHHhcCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCCC-----CeEEEEEccccCCCCCccCCHHHHHHH
Confidence 3333333321 112233332 1789999887421 24455555445553443 34 8999
Q ss_pred HHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcc
Q 010125 273 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKA 352 (517)
Q Consensus 273 ~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~ 352 (517)
.++|++||+++++|.++.++.....-......++ ..| .+++.|.++..+..|+++.++. +.+.+... ..
T Consensus 194 ~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~PD--i~t~sK~l~~G~pig~v~~~~~--~~~~~~~~---~~--- 262 (382)
T PLN00144 194 RALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-EPD--IMTLAKPLAGGLPIGAVLVTEK--VASAINPG---DH--- 262 (382)
T ss_pred HHHHHHcCCEEEEechhhCCCccchHhhhhhcCC-CCC--EEEecccccCCcceEEEEEcHH--HHhccCCC---CC---
Confidence 9999999999999999987643221111111233 356 4556899987788999988643 22222110 00
Q ss_pred ccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCCeeEEEEEe
Q 010125 353 TESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLV----SGDKRFEIVFPCHFAVVCFRV 428 (517)
Q Consensus 353 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l----~~~~~~~l~~~~~~~~v~f~~ 428 (517)
..++ .+.......+.++++.+-...+. ++...+.+++.+.+ .+.|.+.-+.. ...++.+.+
T Consensus 263 ----------~~T~-~~~pl~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~~~l~l 327 (382)
T PLN00144 263 ----------GSTF-AGGPLVCNAALAVLDKISKPGFL---ASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLLVGIQL 327 (382)
T ss_pred ----------CCCC-CCCHHHHHHHHHHHHHHhhchHH---HHHHHHHHHHHHHHHHHHhhCCCceeeec-CceEEEEEe
Confidence 0011 11111223334444555433333 34444444544444 44443211111 223344444
Q ss_pred cCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 429 SPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
... ...+.+.+.++|..+.+. . ...++|+++. ...++++++++++.|.++.
T Consensus 328 ~~~-------------------------~~~~~~~~~~~Gv~i~~~-~--~~~~lrl~p~-~~~~~~~i~~~~~~l~~~l 378 (382)
T PLN00144 328 DVP-------------------------AGPLVDACRDSGLLVLTA-G--KGDVVRLVPP-LVISEAELEQAVEILADCL 378 (382)
T ss_pred cCc-------------------------cHHHHHHHHHCCeEEeec-C--CCCEEEEeCC-CccCHHHHHHHHHHHHHHH
Confidence 211 245677778889765432 1 1368999984 4466889999999998887
Q ss_pred HHH
Q 010125 509 EAF 511 (517)
Q Consensus 509 ~~l 511 (517)
.++
T Consensus 379 ~~~ 381 (382)
T PLN00144 379 PAL 381 (382)
T ss_pred Hhc
Confidence 643
No 325
>PRK06062 hypothetical protein; Provisional
Probab=99.37 E-value=1.2e-09 Score=114.68 Aligned_cols=322 Identities=9% Similarity=0.008 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
++.+.++.+.|.++..-+- ....|+++||+|+..|+..||... | ...+|.....-|-...-+...
T Consensus 94 ~~~~~~lae~L~~~~p~~~-------~~v~f~~SGsEAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~als~ 158 (451)
T PRK06062 94 NDARSEAARLIAERAPGDL-------SKVFFTNGGADANEHAVRMARLHT----G----RPKVLSAYRSYHGGTGSAINL 158 (451)
T ss_pred CHHHHHHHHHHHHhCCCCC-------CEEEEcCChHHHHHHHHHHHHHhh----C----CceEEEEeCCCCCCCHHHHhh
Confidence 4445566677777753211 257999999999999999998752 1 222344444445433333333
Q ss_pred cCCC--------CCCEEEEecCCCCCcc------cC-------HHHHHHHHHHhHhcCCcceEEEeeccCCccccccC--
Q 010125 212 VGID--------VKNFRAIKTTKSSSYG------LS-------PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP-- 268 (517)
Q Consensus 212 ~G~g--------~~~v~~vp~d~~~~~~------~d-------~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp-- 268 (517)
.|.. ...+..++... .++ -| ++.|++.|+.. ....+.+|++.-.....|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~~ 234 (451)
T PRK06062 159 TGDPRRWPNDTGRAGVVHFFGPF--LYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPPP 234 (451)
T ss_pred cCCcccccCCCCCCCCEEeCCCC--ccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCH
Confidence 3310 01223333211 111 12 67788887531 1133456666666666788878
Q ss_pred --hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCc
Q 010125 269 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNP 345 (517)
Q Consensus 269 --l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~ 345 (517)
+++|.++|++||+.|++|.++.|+.....-+.....|+ ..|.+++ .|.++..+ +.|+++.+++ +.+.+.. .
T Consensus 235 ~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~~--i~~~~~~-~ 308 (451)
T PRK06062 235 GYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISEA--IAATFAD-R 308 (451)
T ss_pred HHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcHH--HHHHhcc-C
Confidence 99999999999999999999987533221111111244 5787764 79998764 6788888753 3333421 1
Q ss_pred cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHH-HHHHHHHhc----CCCe-EEecCC
Q 010125 346 EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMA-KLFERLVSG----DKRF-EIVFPC 419 (517)
Q Consensus 346 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a-~~l~~~l~~----~~~~-~l~~~~ 419 (517)
.+... .++. +.+.......++++.+-.+. .+++..++. ++|.+.|++ .|.+ ++-.
T Consensus 309 ~~~~~-------------~T~~-gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vrG-- 369 (451)
T PRK06062 309 PYPGG-------------LTYS-GHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVRG-- 369 (451)
T ss_pred CCCCC-------------CCCC-CCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEec--
Confidence 11100 1111 11222233444555553333 444445554 355555544 3322 1211
Q ss_pred CeeEEEEEecCCCcchhhhhhhhhccccchHH-HHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHH
Q 010125 420 HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEE-QINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVV 498 (517)
Q Consensus 420 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 498 (517)
...++.+.+..... .+...... ........+.+.+.++|.+. .. .+ ..+|++. ....+++||+
T Consensus 370 ~Gl~~gve~~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~-~~---~~-~~lrl~p-pl~~t~~eid 433 (451)
T PRK06062 370 LGVFWALELVADRE----------TREPLAPYGASSAAMAAVKAACKERGLLP-FV---NG-NRIHVVP-PCTVTEDEVR 433 (451)
T ss_pred cccEEEEEEccccc----------ccCCCcccchhhHHHHHHHHHHHHCCcEE-ee---cC-CEEEEEC-CccCCHHHHH
Confidence 12234444432100 00000000 00224567888888899753 22 12 4689986 3467888999
Q ss_pred HHHHHHHHHHHHHHh
Q 010125 499 VAWTVVQQHLEAFQS 513 (517)
Q Consensus 499 ~l~~~l~~~~~~l~~ 513 (517)
++++++.++.+++..
T Consensus 434 ~~~~~l~~~l~~~~~ 448 (451)
T PRK06062 434 EGLAILDAALAVADA 448 (451)
T ss_pred HHHHHHHHHHHHhhh
Confidence 999999999887653
No 326
>PRK06105 aminotransferase; Provisional
Probab=99.37 E-value=1.4e-09 Score=114.40 Aligned_cols=335 Identities=10% Similarity=0.024 Sum_probs=178.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
...+.++.+.|++++..+-+ ..+|+++||+||..|+..+|.....+ +..+ ...+|......|-...-+..+
T Consensus 91 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlKlar~~~~~~-g~t~-r~~il~~~~~yHG~t~~a~s~ 161 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMS-------KVFFTNSGSEANDTVVKLVWYYNNAL-GRPE-KKKIISRQRGYHGVTIASASL 161 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEecCccCCcchhheec
Confidence 44555667777777642211 57899999999999999998642111 2110 233444555556444333333
Q ss_pred cCCC---------CCCEEEEecCCCCCc-----------ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---
Q 010125 212 VGID---------VKNFRAIKTTKSSSY-----------GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP--- 268 (517)
Q Consensus 212 ~G~g---------~~~v~~vp~d~~~~~-----------~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp--- 268 (517)
.|.. ...+..+|....-.+ .-..++|++++... ....+.+|++.......|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~~~ 239 (460)
T PRK06105 162 TGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPPKT 239 (460)
T ss_pred cCCcccccccCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCCHH
Confidence 2211 112333332100000 01245677776531 1124556676665656677766
Q ss_pred -hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCcc
Q 010125 269 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPE 346 (517)
Q Consensus 269 -l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~ 346 (517)
+++|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ .|.++.. .+.|+++.++. +.+.+.....
T Consensus 240 yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~--gK~lggG~~P~~av~~~~~--i~~~~~~~~~ 314 (460)
T PRK06105 240 YWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVM--SKQLSSSYQPLSAVLMNEK--VYDPIADESG 314 (460)
T ss_pred HHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeee--ecccccCcccceEEEEcHH--HHHHHhcccc
Confidence 99999999999999999999966643322111111234 4787765 6888765 35788887643 2233321110
Q ss_pred ccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEE
Q 010125 347 YLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC--HFAVV 424 (517)
Q Consensus 347 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~--~~~~v 424 (517)
.... .....|. .+.+.......++|+.+-.+ +.+++..++.++|.+.|+++....++... ...+.
T Consensus 315 ~~~~---------~~h~~T~-~gnpl~~aaa~a~L~~i~~~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~ 381 (460)
T PRK06105 315 KIGT---------FGHGFTA-SGHPVAAAVALENLAIIEER---DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIA 381 (460)
T ss_pred cCcc---------cccCCCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEE
Confidence 0000 0000011 11111222334455554333 45677777888888888765322222111 12233
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.+.+.+... .+.... .......++...+.++|.++ .+. + ..+|++. ....+++||+++++.+
T Consensus 382 gie~~~~~~----------~~~~~~--~~~~~a~~i~~~~~~~Gvl~-~~~---g-~~i~l~P-pl~it~~eid~~~~~l 443 (460)
T PRK06105 382 AVELVADKA----------TKTPFE--PPGKVGARANAAAHEHGVIS-RAM---G-DTLAFCP-PLIITAAQVDEMVDRF 443 (460)
T ss_pred EEEEecCcc----------cCCCCC--chhHHHHHHHHHHHHCCeEE-Eec---C-CEEEEEC-CCccCHHHHHHHHHHH
Confidence 444432210 000000 00123456777888889654 221 2 4799987 3457889999999999
Q ss_pred HHHHHHHHh
Q 010125 505 QQHLEAFQS 513 (517)
Q Consensus 505 ~~~~~~l~~ 513 (517)
.++.+++.+
T Consensus 444 ~~~l~~~~~ 452 (460)
T PRK06105 444 GRALDDVAA 452 (460)
T ss_pred HHHHHHHHH
Confidence 999887654
No 327
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.36 E-value=9e-10 Score=115.35 Aligned_cols=326 Identities=14% Similarity=0.132 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
..+.++.+.|.+++.-+. ....|+++||+|+..|+..||.....+ |.. ...-+|.....-|-...-+..+.
T Consensus 92 ~~~~~la~~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~~-~r~~ii~~~~~yHG~t~gals~~ 162 (445)
T PRK09221 92 PLAFELAERLAELAPGGL-------DHVFFTNSGSESVDTALKIALAYHRAR-GQG-TRTRLIGRERGYHGVGFGGISVG 162 (445)
T ss_pred HHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC-CCcEEEEECCCcCccchhhhccC
Confidence 344456677777763211 157899999999999999998763221 211 02234444544553322222222
Q ss_pred CC-------C--CCCEEEEecCC-CCC--cc--------cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----
Q 010125 213 GI-------D--VKNFRAIKTTK-SSS--YG--------LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---- 268 (517)
Q Consensus 213 G~-------g--~~~v~~vp~d~-~~~--~~--------~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---- 268 (517)
|. + ...+..+|... ... +. -..++|++.++... ...+.+|++.......|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAavi~Epv~g~~G~~~~~~~y 240 (445)
T PRK09221 163 GIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHD--ASTIAAVIVEPMAGSAGVLVPPKGY 240 (445)
T ss_pred CChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcC--CCcEEEEEEecccCCCCcccCCHHH
Confidence 21 0 01233444321 000 00 12456777775321 123556777766777888888
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
+++|.++|++||+.+++|+++.|+.....-+.....++ ..|.+++ .|.++.. +..|+++++++ +.+.+...+.+
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi~~~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~~~ 315 (445)
T PRK09221 241 LQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDIITF--AKGLTNGAIPMGAVIASDE--IYDAFMQGPEY 315 (445)
T ss_pred HHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCEEEe--ccccccCcccceeeEEcHH--HHHhhccCccc
Confidence 99999999999999999999976532211111101123 3576654 6887543 34666766543 22333221111
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-Ce-eEEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC-HF-AVVC 425 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~-~~-~~v~ 425 (517)
... -....++. +.+.......++++.+-.+ +.+++..++.++|++.|+++.++..+.+. .. .+..
T Consensus 316 ~~~---------~~~~~T~~-~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~ 382 (445)
T PRK09221 316 AIE---------FFHGYTYS-AHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAG 382 (445)
T ss_pred ccc---------cccccCCC-cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEE
Confidence 000 00011211 1111222333445554333 35678888899999988776332222111 11 1223
Q ss_pred EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 426 FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 426 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
+.+.+... . . .....++.+.+.++|.+. .. .+ ..+|++. ....+++||++++++|+
T Consensus 383 v~~~~~~~-------------~-~----~~~~~~~~~~~~~~Gv~~-~~---~~-~~lr~~P-pl~~t~~eid~~~~~l~ 438 (445)
T PRK09221 383 IELAPRPG-------------A-P----GARGYEAFMKCFEKGLLV-RY---TG-DTIALSP-PLIIEKAQIDELVDALG 438 (445)
T ss_pred EEEecccc-------------c-c----cchHHHHHHHHHHCCeEE-ee---cC-CEEEEEC-CccCCHHHHHHHHHHHH
Confidence 33332100 0 0 112346677788888654 22 22 4799997 45678899999999999
Q ss_pred HHHHHH
Q 010125 506 QHLEAF 511 (517)
Q Consensus 506 ~~~~~l 511 (517)
++.+++
T Consensus 439 ~~l~~~ 444 (445)
T PRK09221 439 DALRAV 444 (445)
T ss_pred HHHHhh
Confidence 988654
No 328
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.36 E-value=1.1e-09 Score=115.01 Aligned_cols=319 Identities=13% Similarity=0.029 Sum_probs=174.6
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
..+.++.+.|+++++...+ ...|+++|||||..|+..||... | ...+|.....-|-...-+..+.
T Consensus 96 ~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~a~s~~ 160 (457)
T PRK05639 96 ERAIRVAEKLAEISPIENP-------KVLFGLSGSDAVDMAIKVSKFST----R----RPWILAFIGAYHGQTLGATSVA 160 (457)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhc----C----CCeEEEECCCcCCccHHHHHHc
Confidence 3444566777777643222 57999999999999999998652 1 2223334444554333333333
Q ss_pred CC--------C--CCCEEEEecCCCCC--cc----cCHH--------HHHHHHHHhHhcCCcceEEEeeccCCccccccC
Q 010125 213 GI--------D--VKNFRAIKTTKSSS--YG----LSPD--------SLMAQINSDVEVGLIPLFLCATIGTTAITAVDP 268 (517)
Q Consensus 213 G~--------g--~~~v~~vp~d~~~~--~~----~d~~--------~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp 268 (517)
|. + ...++.+|...... +. -+.+ .|++.+......+....+|++.-.....|.+-|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p 240 (457)
T PRK05639 161 AFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVP 240 (457)
T ss_pred CCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCC
Confidence 31 0 12355565431000 00 1232 344443321111234556666655555566544
Q ss_pred ----hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCC
Q 010125 269 ----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTN 344 (517)
Q Consensus 269 ----l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~ 344 (517)
+++|.++|++||+.+++|.++.|+.....-+....-++ ..|.++ +.|.++..++.|+++.++.- .+.+.
T Consensus 241 ~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~pi~av~~~~~i--~~~~~-- 313 (457)
T PRK05639 241 PENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLII--FGKGVASGMGLSGVIGRKEL--MDLTS-- 313 (457)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEE--echhhcCCCcceeEEehHHH--HhhcC--
Confidence 89999999999999999999987532221111111244 589888 58999876778888876442 11111
Q ss_pred ccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--Ce
Q 010125 345 PEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD-KRFEIVFPC--HF 421 (517)
Q Consensus 345 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~-~~~~l~~~~--~~ 421 (517)
..++ ++. .+.+....+..++++.+..+ +.+++..++.++|++.|+++ .++.++... ..
T Consensus 314 ~~~~---------------~T~-~g~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG~G 374 (457)
T PRK05639 314 GSAL---------------LTP-AANPVISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKG 374 (457)
T ss_pred CCcc---------------cCC-CcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeeccce
Confidence 0111 011 11111222333445544333 34566666788888887663 122222221 12
Q ss_pred eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHH
Q 010125 422 AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAW 501 (517)
Q Consensus 422 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~ 501 (517)
.++.+.+..+.. .. .......+.+.+.++|.+. .+.. .+...+|++. ....+++||++++
T Consensus 375 l~~gve~~~~~~--------------~~---~~~~~~~~~~~~~~~Gv~~-~~~g-~~~~~lr~~P-pl~it~~~id~~~ 434 (457)
T PRK05639 375 LMIGVEIVKENG--------------KP---DPELTGKICWRAFELGLIL-PSYG-MFGNVIRITP-PLVITKEIAEKGL 434 (457)
T ss_pred eEEEEEEecCCC--------------CC---CHHHHHHHHHHHHhCCeEE-eecC-CCCCEEEEeC-CCccCHHHHHHHH
Confidence 333444432210 00 0234567778888889654 3321 1236899998 4677888999999
Q ss_pred HHHHHHHHHHH
Q 010125 502 TVVQQHLEAFQ 512 (517)
Q Consensus 502 ~~l~~~~~~l~ 512 (517)
++|.++...+.
T Consensus 435 ~~l~~~l~~~~ 445 (457)
T PRK05639 435 EIMERAIKDAL 445 (457)
T ss_pred HHHHHHHHHHH
Confidence 99999987764
No 329
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.35 E-value=1.6e-10 Score=115.16 Aligned_cols=218 Identities=14% Similarity=0.140 Sum_probs=149.7
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCch----
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHC---- 203 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~---- 203 (517)
.|....+| +.++++-|.+ ..+.+++|..|...++..... .+..|+++...|.
T Consensus 76 nPt~~~le----~~iaal~ga~---------~~l~fsSGmaA~~~al~~L~~-----------~g~~iV~~~~~Y~gT~~ 131 (409)
T KOG0053|consen 76 NPTRDVLE----SGIAALEGAA---------HALLFSSGMAAITVALLHLLP-----------AGDHIVATGDVYGGTLR 131 (409)
T ss_pred CCchHHHH----HHHHHHhCCc---------eEEEecccHHHHHHHHHHhcC-----------CCCcEEEeCCCcccHHH
Confidence 45555555 4566776655 457778887777777665542 2333555545443
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 204 ALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 204 s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
-+.+....+|+ ....+.++ |++.++++++++++ +|.+..++||++.+-||++|+++|+++|+.+
T Consensus 132 ~l~~~~~~~gi---e~~~vd~~-------~~~~~~~~i~~~t~------~V~~ESPsNPll~v~DI~~l~~la~~~g~~v 195 (409)
T KOG0053|consen 132 ILRKFLPKFGG---EGDFVDVD-------DLKKILKAIKENTK------AVFLESPSNPLLKVPDIEKLARLAHKYGFLV 195 (409)
T ss_pred HHHHHHHHhCc---eeeeechh-------hHHHHHHhhccCce------EEEEECCCCCccccccHHHHHHHHhhCCCEE
Confidence 34555667788 77777654 67888888888654 8999999999999999999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCC--CcceEEEEeCchhHHhhhcCCccccCCccccccccccC
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT--LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDY 361 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p--~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 361 (517)
+||..++++... +.+.. +||.++-+..||+++- .-.|++..+..+..++... ...++
T Consensus 196 vVDnTf~~p~~~-~pL~l------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~-~~~~l------------- 254 (409)
T KOG0053|consen 196 VVDNTFGSPYNQ-DPLPL------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKF-LQEDL------------- 254 (409)
T ss_pred EEeCCcCccccc-Chhhc------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHH-HHHHh-------------
Confidence 999999887432 22221 6999999999999754 2355565554443332221 11122
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 010125 362 KDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEI 415 (517)
Q Consensus 362 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l 415 (517)
+....++.+|...| |..-+.-+++++.+++..++..|++.|.++-
T Consensus 255 -------g~~~~p~~~~ll~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~k 299 (409)
T KOG0053|consen 255 -------GWCEDPFDLFLLSR--GLKTLHLRINKHSENALKIALLLEAHPKVKK 299 (409)
T ss_pred -------cCCCCHHHHHHHhc--CcchhhhhHHHHHHHHHHHHHHhhhCCceeE
Confidence 11225566666665 4455666888999999999999998888873
No 330
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.35 E-value=7.4e-10 Score=111.28 Aligned_cols=341 Identities=11% Similarity=0.051 Sum_probs=193.3
Q ss_pred CCccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHH
Q 010125 93 SPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILC 172 (517)
Q Consensus 93 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~ 172 (517)
.|.-+||-+ |. +.+.+...+... ..|. ..+++|-++.+.+.++++.-+ ..-|+++||||++.
T Consensus 63 Gp~ilGH~~-----p~-V~~Av~~~l~~G-~~fg---~Pte~Ei~~Aell~~~~p~~e--------~vrfvnSGTEAtms 124 (432)
T COG0001 63 GPLILGHAH-----PA-VVEAVQEQLERG-LSFG---APTELEVELAELLIERVPSIE--------KVRFVNSGTEATMS 124 (432)
T ss_pred cccccCCCC-----HH-HHHHHHHHHHhc-CCCC---CCCHHHHHHHHHHHHhcCccc--------EEEEecchhHHHHH
Confidence 455666653 22 444444444322 2222 357788889999999987532 47899999999999
Q ss_pred HHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC-------------CC---CCCEEEEecCCCCCcccCHHH
Q 010125 173 TLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG-------------ID---VKNFRAIKTTKSSSYGLSPDS 236 (517)
Q Consensus 173 al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G-------------~g---~~~v~~vp~d~~~~~~~d~~~ 236 (517)
|+..||-.. | .+.+|-+....|-+.....--.| +. .+.++.+|.+ |+++
T Consensus 125 AiRlARa~T----g----R~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~a 189 (432)
T COG0001 125 AIRLARAYT----G----RDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLEA 189 (432)
T ss_pred HHHHHHHhh----C----CCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-------CHHH
Confidence 999998653 1 22334444445544333322222 21 1134445443 8999
Q ss_pred HHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCee
Q 010125 237 LMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF 312 (517)
Q Consensus 237 Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi 312 (517)
|++++++. |....+|++.-.-.+.|.|-| +++|.++|++||+.|+.|....|+-...-.... .-|+ ..|..
T Consensus 190 l~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~-~~gi-~PDlt 264 (432)
T COG0001 190 LEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQG-YYGV-EPDLT 264 (432)
T ss_pred HHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCccccc-ccCc-Ccchh
Confidence 99999864 233557777776777788866 789999999999999999998776543221111 1122 45665
Q ss_pred eeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHH---HHHHHhcH-HH
Q 010125 313 SLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLW---FVIRNYGV-AN 388 (517)
Q Consensus 313 ~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~-~g 388 (517)
| +-|.++..+++|++-.|.+ ... .+... ..+++ .++-+..++.+. ++++.+-. ++
T Consensus 265 t--lGKiIGGGlP~ga~gGr~e-iM~-~~~p~-g~vyq----------------aGT~sgnplamaAG~atl~~l~~~~~ 323 (432)
T COG0001 265 T--LGKIIGGGLPIGAFGGRAE-IME-QLAPL-GPVYQ----------------AGTLSGNPLAMAAGLATLEELMTEEG 323 (432)
T ss_pred h--hhhhhcCCcceeeeccHHH-HHh-hhCCC-CCccc----------------cCCCCCcHHHHHHHHHHHHHHHhccc
Confidence 5 5699988888998876533 221 12111 11111 122233444433 34444322 22
Q ss_pred HHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHH
Q 010125 389 LRHFLRSHVNMAKLFERLVS----GDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESI 464 (517)
Q Consensus 389 ~~~~i~~~~~~a~~l~~~l~----~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 464 (517)
..++..+++++|++.|+ +. ++.+...-..+++++.+.....+... .....+... -.++...|
T Consensus 324 ---~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~i~F~~~~~~n~~---------da~~sd~~~-~~~~~~~~ 389 (432)
T COG0001 324 ---VYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFGIFFTEEGVRNYA---------DAKRSDVER-FAKFFHHL 389 (432)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEEEEecCCCCCCHH---------HHHhhchHH-HHHHHHHH
Confidence 34455555555555554 33 44443223345556555442111000 000111122 23445578
Q ss_pred HhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHh
Q 010125 465 NASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQS 513 (517)
Q Consensus 465 ~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~ 513 (517)
.++|+ ++.+..+.. .+.+...+++||++.++++.++.+++..
T Consensus 390 l~~GV-~l~ps~~ea------~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 390 LNRGV-YLAPSQFEA------GFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred HhCCc-ccCCccccc------eeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 88885 566654332 3445667888999999999988887653
No 331
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.34 E-value=6.8e-10 Score=115.99 Aligned_cols=314 Identities=11% Similarity=0.048 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
...+.++.+++++++.-. ...+++.||++||..|+..+|... | ++.+|.....-|-...-+...
T Consensus 89 ~~~~~~la~~L~~~~~~~--------~~v~~~~sGseA~e~Aik~a~~~~----g----~~~ii~~~~~yHG~t~~~~~~ 152 (426)
T PRK00062 89 TELEVELAELVIELVPSI--------EMVRMVNSGTEATMSAIRLARGYT----G----RDKIIKFEGCYHGHADSLLVK 152 (426)
T ss_pred CHHHHHHHHHHHHhCCCC--------CEEEEecCHHHHHHHHHHHHHHHh----C----CCeEEEEcCccCCchhhhhhc
Confidence 344556777777765211 157899999999999999998752 1 233444444455433222222
Q ss_pred cCCCC-----C----CEE-----EEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHH
Q 010125 212 VGIDV-----K----NFR-----AIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLC 273 (517)
Q Consensus 212 ~G~g~-----~----~v~-----~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~ 273 (517)
.|-+. . ..+ .+.+. .-|+++|++.+.+. +....+|++.......|.+-| +++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~ 224 (426)
T PRK00062 153 AGSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLR 224 (426)
T ss_pred cCccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHH
Confidence 12100 0 000 01111 13789999988642 123446666655666788877 99999
Q ss_pred HHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCC-ccccCCcc
Q 010125 274 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTN-PEYLKNKA 352 (517)
Q Consensus 274 ~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~-~~yl~~~~ 352 (517)
++|++||+++++|.+|.|+ ...........++ ..|. ..+.|.++..+..|++++++ + +.+.+... ..+...
T Consensus 225 ~l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~pDi--~~~gK~l~~G~p~ga~~~~~-~-i~~~~~~~~~~~~~~-- 296 (426)
T PRK00062 225 ELCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-TPDL--TTLGKIIGGGLPVGAFGGRR-E-IMEQLAPLGPVYQAG-- 296 (426)
T ss_pred HHHHHcCCEEEEeechhcc-ccCCccHHHHhCC-Ccch--HhhhhHhhCCCcceeeeEHH-H-HHHhhccCCCceecc--
Confidence 9999999999999999866 3221110001122 2454 44579998766678876643 2 23333211 111110
Q ss_pred ccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEe
Q 010125 353 TESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCHFAVVCFRV 428 (517)
Q Consensus 353 ~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~~~~v~f~~ 428 (517)
+ .++.+.....+.++++.+..+ +..++..++.+++++.|++ . ++..-......++.+.+
T Consensus 297 ------------T-~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~vrg~G~~~~i~l 359 (426)
T PRK00062 297 ------------T-LSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKA-GIPLTVNRVGSMFGLFF 359 (426)
T ss_pred ------------c-CcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEecceEEEEE
Confidence 1 111122333444555555333 3556666677777776653 3 23221123344555554
Q ss_pred cCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 429 SPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
.+...+.. ......-.....++.+.+.++|.. +.+.. ...+|++ ...+++||++++++|+++.
T Consensus 360 ~~~~~~~~----------~~~~~~~~~~~~~i~~~l~~~Gv~-v~~~~---~~~~~~~---~~~t~~ei~~~~~~l~~~l 422 (426)
T PRK00062 360 TDEPVTNY----------ADAKKSDTERFARFFHAMLDEGVY-LAPSQ---FEAGFVS---AAHTDEDIEKTLEAARKAF 422 (426)
T ss_pred ecCCCcch----------hhhccccHHHHHHHHHHHHHCCeE-eecCC---cCceeee---ccCCHHHHHHHHHHHHHHH
Confidence 33210000 000000012345678888888864 43332 1245554 3558889999999999887
Q ss_pred HHH
Q 010125 509 EAF 511 (517)
Q Consensus 509 ~~l 511 (517)
.++
T Consensus 423 ~~~ 425 (426)
T PRK00062 423 AAL 425 (426)
T ss_pred Hhh
Confidence 654
No 332
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.34 E-value=2e-09 Score=112.71 Aligned_cols=326 Identities=12% Similarity=0.116 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
..+.++.+.|++++. ... ....|+++||+|+..|+..||.....+ |..+ ..-+|.....-|-...-+..+.
T Consensus 89 ~~~~~la~~l~~~~p--~~~-----~~v~f~~sGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~gals~t 159 (442)
T PRK13360 89 PKAFELANRIAEIAP--GGL-----NHVFFTNSGSESVDTALKIALAYHRAR-GEGS-RTRLIGRERGYHGVGFGGISVG 159 (442)
T ss_pred HHHHHHHHHHHHhCC--CCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHhhhhcc
Confidence 344566777777753 111 157899999999999999998753211 1110 1223444444453322222222
Q ss_pred CC-------C--CCCEEEEecCCC-CC--cc--------cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----
Q 010125 213 GI-------D--VKNFRAIKTTKS-SS--YG--------LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---- 268 (517)
Q Consensus 213 G~-------g--~~~v~~vp~d~~-~~--~~--------~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---- 268 (517)
|. + ...+..+|.... .. +. -..++|++++... ....+.+|++.......|.+-|
T Consensus 160 g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~f 237 (442)
T PRK13360 160 GIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKGY 237 (442)
T ss_pred CChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHHH
Confidence 21 0 113344543210 00 00 1256778877532 1234556777766667788888
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
+++|.++|++||+++++|.++.|+.....-+.....++ ..|.+++ .|.++.. +.+|.++++++ +.+.+...+..
T Consensus 238 l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~--i~~~~~~~~~~ 312 (442)
T PRK13360 238 LQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE--IHDAFMQGPEA 312 (442)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH--HHHHhhcCCcc
Confidence 99999999999999999999966532221111111233 4677654 7988654 35777777543 22333221100
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-ee-EEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCH-FA-VVC 425 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~-~~-~v~ 425 (517)
.. ..+...++. +.........++++.+-.+ ..+++..++.+++.+.|+++..+..+.+.. .+ ++.
T Consensus 313 ~~---------~~~~~~T~~-g~pl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~ 379 (442)
T PRK13360 313 GI---------EFFHGYTYS-GHPLACAAALATLDLYERE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGA 379 (442)
T ss_pred cc---------ccccCCCCC-CCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEE
Confidence 00 000111221 1222223444455555433 355677778888888887643222221211 11 122
Q ss_pred EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 426 FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 426 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
+.+.+... . . .....++.+++.++|... .. .+ ..+|++. ....+++|||+++++|.
T Consensus 380 ~~l~~~~~-------------~-~----~~~~~~~~~~l~~~Gvl~-~~---~~-~~lr~~P-pl~~t~~eid~~~~~l~ 435 (442)
T PRK13360 380 VELAPRDG-------------K-P----GKRAYEVFLKCFEKGLMI-RY---TG-DILALSP-PLIIEEAQIDELFDILA 435 (442)
T ss_pred EEEecCCC-------------C-c----chhHHHHHHHHHHCCcEE-Ee---cC-CEEEEeC-CCccCHHHHHHHHHHHH
Confidence 33322100 0 0 112345667777888644 22 12 4699997 45678889999999999
Q ss_pred HHHHHH
Q 010125 506 QHLEAF 511 (517)
Q Consensus 506 ~~~~~l 511 (517)
++.+++
T Consensus 436 ~~l~~~ 441 (442)
T PRK13360 436 QALKET 441 (442)
T ss_pred HHHHHh
Confidence 988764
No 333
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.33 E-value=3.4e-09 Score=110.46 Aligned_cols=315 Identities=11% Similarity=0.046 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC
Q 010125 134 LENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG 213 (517)
Q Consensus 134 lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G 213 (517)
.+.++.+.|.+++..+.. ...+|+++||+|+..|+..||... | .+.+|.....-|-...-+..+.|
T Consensus 84 ~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~s~t~ 149 (421)
T PRK06777 84 SYVTLAERINALAPIDGP------AKTAFFTTGAEAVENAVKIARAYT----G----RPGVIAFGGAFHGRTLLTMALTG 149 (421)
T ss_pred HHHHHHHHHHHhCCCCCC------ceEEEeCCcHHHHHHHHHHHHHhh----C----CCeEEEEcCCcCCccHHHHhhcC
Confidence 334566777776542111 157889999999999999998752 1 12234444445543333333333
Q ss_pred C--------C--CCCEEEEecCCCCC---cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc-cC---hhHHHHHH
Q 010125 214 I--------D--VKNFRAIKTTKSSS---YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV-DP---LKPLCDVA 276 (517)
Q Consensus 214 ~--------g--~~~v~~vp~d~~~~---~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i-dp---l~eI~~i~ 276 (517)
. + ...+..+|...... ..-+++.+++.+++.. .+..+.+|++.-.....|.. -| +++|.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc 228 (421)
T PRK06777 150 KVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLC 228 (421)
T ss_pred CCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 1 0 01233333221000 0124667887775321 11234466666555555643 33 99999999
Q ss_pred HHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccc
Q 010125 277 KQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESM 356 (517)
Q Consensus 277 ~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~ 356 (517)
++||+++++|.+|.++.....-+.....++ ..|.++ +.|.++..+..|+++.++. +.+.+.... ..
T Consensus 229 ~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~~--i~~~~~~~~--~~------- 294 (421)
T PRK06777 229 DEHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISAVVGRAE--VMDAPAPGG--LG------- 294 (421)
T ss_pred HHcCCEEEEechhhCCccCCchhhhhhcCC-CCCEEe--eehhhcCCCceEEEEEcHH--HHhccCCCC--CC-------
Confidence 999999999999987533221111000122 467554 6899986677898887633 222332110 00
Q ss_pred ccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCeeEEEEEecCCC
Q 010125 357 QVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD----KRFEIVFPCHFAVVCFRVSPSP 432 (517)
Q Consensus 357 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~----~~~~l~~~~~~~~v~f~~~~~~ 432 (517)
.++ ++.........++|+.+.. .+++++..++.+++.+.|+++ |.+.-+ .+...++.+.+..+.
T Consensus 295 -------~T~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~ 362 (421)
T PRK06777 295 -------GTY-AGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQ 362 (421)
T ss_pred -------CCC-CcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCc
Confidence 011 1111222233334443322 356677777888888887653 433323 344445554443210
Q ss_pred cchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 433 VLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
. ... .......+.+.+.++|.+......+ + .++|++. ....+++++++++++|.+..
T Consensus 363 ~-------------~~~---~~~~~~~l~~~~~~~Gv~i~~~~~~-g-~~lr~~p-pl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 363 T-------------GKP---SPEFTRQYQRQALEEGLLLLSCGVH-G-NVIRFLY-PLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred c-------------CCc---cHHHHHHHHHHHHhCCeEEeecCCC-C-CEEEEeC-CCCCCHHHHHHHHHHHHHHH
Confidence 0 000 1234566777778888765433222 2 4899987 34678889999999998764
No 334
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.33 E-value=3.1e-09 Score=111.46 Aligned_cols=332 Identities=10% Similarity=0.023 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHHcCCCc-ccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPK-SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~-~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
++.+.++.+.|.+++.-.. .. ...+++++|||||..|+..||... | +..+|......|-...-+..
T Consensus 81 ~~~~~~lae~L~~~~p~~~~~~-----~~~f~~~sGsEA~e~AlklAr~~t----g----r~~Ii~~~~~yHG~t~~~~s 147 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKMDY-----KLQFPGPSGADAVEAAIKLAKTYT----G----RTNVISFSGGFHGMTIGALA 147 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCCCc-----cEEEeCCCHHHHHHHHHHHHHHhc----C----CCeEEEEcCCcCCchHHHHh
Confidence 4455567778888764221 11 023456899999999999999752 1 22345555555644444444
Q ss_pred HcCC---------CCCCEEEEecCCCCCccc--------CHHH----HHHHHHHhHhcCCcceEEEeeccCCcccccc--
Q 010125 211 IVGI---------DVKNFRAIKTTKSSSYGL--------SPDS----LMAQINSDVEVGLIPLFLCATIGTTAITAVD-- 267 (517)
Q Consensus 211 ~~G~---------g~~~v~~vp~d~~~~~~~--------d~~~----Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id-- 267 (517)
+.|. ....+..+|... ..+. +.+. +++.+.........+.+|++.......|.+-
T Consensus 148 ~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~ 225 (442)
T TIGR00709 148 VTGNLFAKNAVGMLMPGVQFMPYPH--EYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAP 225 (442)
T ss_pred hcCChhhhccCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCC
Confidence 4331 011244444321 1121 2222 3333322111112344555555555556553
Q ss_pred --ChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCc
Q 010125 268 --PLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNP 345 (517)
Q Consensus 268 --pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~ 345 (517)
-+++|.++|++||++++.|..+.|+.....-+.....++ ..|.++ ..|.++..+..|+++.+++ + ..+. .
T Consensus 226 ~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~--~gK~l~~G~Pigav~~~~~--~-~~~~--~ 297 (442)
T TIGR00709 226 SEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVV--MSKAVGGGLPLAVLLIAPE--F-DAWQ--P 297 (442)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEE--EcccccCCcccEEEEEchH--H-hccC--C
Confidence 389999999999999999999987654322111111133 578888 5799987788999988654 2 2221 1
Q ss_pred cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--Cee
Q 010125 346 EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFA 422 (517)
Q Consensus 346 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~ 422 (517)
.... .++ .+......+..++++.+..+ +..++..++.++|.+.|+++. .+.++... ...
T Consensus 298 ~~~~--------------~T~-~gnpla~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 359 (442)
T TIGR00709 298 AGHT--------------GTF-RGNQLAMVTGTEALNYWKDD---NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGL 359 (442)
T ss_pred CcCC--------------CCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 0000 011 12122223334445444333 345566677777777776531 12222221 223
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWT 502 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~ 502 (517)
++.+.+...... .+.. .....+ ......+...+.++|.+. .+... ...++|+.. ....+++||+++++
T Consensus 360 ~~~ie~~~~~~~------~~~~--~~~~~~-~~~~~~~~~~~~~~Gvl~-~~~~~-~~~~l~~~P-pl~it~~ei~~~~~ 427 (442)
T TIGR00709 360 MQGIMIVDERQS------KDAT--GAYPRD-CELAAAIQGACFENGLLL-ETGGR-EGEVFRLLC-PITIDQEECEEGIS 427 (442)
T ss_pred EEEEEEccCccc------cccc--ccCCcc-hHHHHHHHHHHHHCCeEE-eecCC-CCCEEEEEC-CCCCCHHHHHHHHH
Confidence 344444321000 0000 000000 123566777788888653 33222 235799987 46788899999999
Q ss_pred HHHHHHHHHHhhcC
Q 010125 503 VVQQHLEAFQSAFK 516 (517)
Q Consensus 503 ~l~~~~~~l~~~~~ 516 (517)
++.++..++.++..
T Consensus 428 ~l~~~l~~~~~~~~ 441 (442)
T TIGR00709 428 RFKQAVEEALAEVR 441 (442)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999988877653
No 335
>PRK05965 hypothetical protein; Provisional
Probab=99.32 E-value=4e-09 Score=110.94 Aligned_cols=338 Identities=12% Similarity=0.058 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+..+.++.+.|.+++.-+. ...+|+++||+|+..|+..||.....+ |..+ ...+|......|-...-+..+
T Consensus 89 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~~-r~kii~~~~~YHG~t~~a~s~ 159 (459)
T PRK05965 89 SEPAIRLAAKLAERAPGSL-------NHVYFTLGGSDAVDSAVRFIRHYWNAT-GRPS-KKQFISLERGYHGSSSVGAGL 159 (459)
T ss_pred CHHHHHHHHHHHhhCCCCc-------CEEEEeCChhHHHHHHHHHHHHHHHhc-CCCC-ccEEEEecCCcCcccHHHHHh
Confidence 3444556677777653111 257999999999999999998753221 2110 122444554455433323333
Q ss_pred cCC-------C--CCCEEEEecCCC--CCcccC--------HHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----
Q 010125 212 VGI-------D--VKNFRAIKTTKS--SSYGLS--------PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---- 268 (517)
Q Consensus 212 ~G~-------g--~~~v~~vp~d~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---- 268 (517)
.|. | ...+..+|.... ..+.-| +++|++.|.... ...+.+|++.-.....|.+-|
T Consensus 160 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~--~~~iAAvIvEPiqg~gG~~~p~~~y 237 (459)
T PRK05965 160 TALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELG--ADNVAAFFCEPIQGSGGVIVPPKGW 237 (459)
T ss_pred cCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCCCCccCCHHH
Confidence 221 1 122344443210 000112 356777775321 123456666655545566533
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
+++|.++|++||+.|++|..+.|+.....-+....-|+ ..|.+++ -|.++..+ ..|+++++++- .+.+......
T Consensus 238 l~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~i--~~~~~~~~~~ 312 (459)
T PRK05965 238 LKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTV--AKGLTSGYVPMGAVLMSDHV--YQGIADGAGA 312 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEe--chhhccCCcceeEEEEcHHH--HHHHhccccc
Confidence 89999999999999999999987743322111111234 5888887 58887774 78888886542 2233211100
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC--HFAVVC 425 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~--~~~~v~ 425 (517)
... -....|+ .+.+.......++++.+-.+ +.+++..++.++|.+.|+++....++... ...++.
T Consensus 313 ~~~---------~~h~~T~-~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~g 379 (459)
T PRK05965 313 AAP---------VGHGYTY-SAHPVSAAVGLEVLRLYHEG---GLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGA 379 (459)
T ss_pred ccc---------ccccCCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEE
Confidence 000 0000011 11122223334445544333 35566777888888888764222122111 122334
Q ss_pred EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 426 FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 426 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
+.+..... . ............++.+.+.++|.+.. + .|..++|++. ....+++||+++++.|.
T Consensus 380 ie~~~~~~----------~--~~~~~~~~~~~~~i~~~~~~~Gll~~-~---~g~~~i~~~P-pL~it~~ei~~~~~~l~ 442 (459)
T PRK05965 380 LELVADKA----------T--KTPFDAALDPADRIFDRAYANGLVFR-A---FGDGVLGFAP-ALCCTEGEFDLIFERTR 442 (459)
T ss_pred EEEecccc----------c--cCCCCchhHHHHHHHHHHHhCCeEEE-e---cCCcEEEEEC-CCcCCHHHHHHHHHHHH
Confidence 44432100 0 00000001345667788888897542 2 2446799986 45678899999999999
Q ss_pred HHHHHHHhhc
Q 010125 506 QHLEAFQSAF 515 (517)
Q Consensus 506 ~~~~~l~~~~ 515 (517)
++.+++.+++
T Consensus 443 ~~l~~~~~~~ 452 (459)
T PRK05965 443 KTLDDVLADP 452 (459)
T ss_pred HHHHHHhcCc
Confidence 9998876544
No 336
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.32 E-value=3.7e-09 Score=111.10 Aligned_cols=319 Identities=13% Similarity=0.083 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
++.+.++.+.|+++++-..+ ..+|++|||+|+..|+..||... | ...+|.....-|-...-+..+
T Consensus 112 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~a~s~ 176 (459)
T PRK06082 112 NETAIECAEKLTEIAGGELN-------RVLFAPGGTSAIGMALKLARHIT----G----NFKVVSLWDSFHGASLDAISV 176 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEECCCcHHHHHHHHHHHHHhc----C----CCEEEEEeCCCcCccHHHHhh
Confidence 45566677778887653212 57999999999999999998651 1 223444555556544444444
Q ss_pred cCCC---------CCCEEEEecCCCCCcc-----c------CHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---
Q 010125 212 VGID---------VKNFRAIKTTKSSSYG-----L------SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP--- 268 (517)
Q Consensus 212 ~G~g---------~~~v~~vp~d~~~~~~-----~------d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp--- 268 (517)
.|-. ...+..+|... .++ . +++.|++.+++. + ...+|++.-.....+.+-|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~i~~~---~-~vAavIvEPv~g~g~~~~~~~y 250 (459)
T PRK06082 177 GGEACFRQGMGPLMAGVERIPPAV--SYRGAFPDADGSDVHYADYLEYVIEKE---G-GIGAFIAEAVRNTDVQVPSKAY 250 (459)
T ss_pred cCCcccccCCCCCCCCCEEeCCCc--ccccccCChhHHHHHHHHHHHHHHhcC---C-CEEEEEECCccCCCCcCCCHHH
Confidence 3320 01234444211 011 1 135577777531 2 2445555544333223344
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
+++|.++|++||+.+++|.++.|+.....-+....-|+ ..|.++ +.|.++..+ ..|++++++. +...+.. .+
T Consensus 251 l~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~--~gKgl~gG~~P~~av~~~~~--i~~~~~~--~~ 323 (459)
T PRK06082 251 WKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILC--IGKGLGGGLVPIAAMITKDK--YNTAAQI--SL 323 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEE--ecccccCCCCcceEEEEcHH--HHhhccC--CC
Confidence 89999999999999999999987533221111111244 588887 589998764 6888888654 2112210 00
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFAVV 424 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~~v 424 (517)
..+|.. +.+.......++++.+..+ +.+++..++.++|.+.|+++. ...++... ...++
T Consensus 324 --------------~~~T~~-gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~ 385 (459)
T PRK06082 324 --------------GHYTHE-KSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLW 385 (459)
T ss_pred --------------CCCCCC-cCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeecccee
Confidence 001111 1111222333445544333 356677778888888886531 11112111 12334
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.+.+..... . ... .......+...+.++|.+... . +..++|++. ....+++||+++++++
T Consensus 386 ~ve~~~~~~----------~--~~~---~~~~~~~~~~~~~~~Gvl~~~-~---~~~~i~~~P-pl~it~~eid~~~~~l 445 (459)
T PRK06082 386 GVELVTDRH----------T--KER---AYDEAEAVLYRCLNNGLSFKV-S---QGNVIQLSP-PLIITREELTQALAIL 445 (459)
T ss_pred EEEEccCcc----------c--cCc---cHHHHHHHHHHHHhCCCEEEe-c---CCCEEEEeC-CCccCHHHHHHHHHHH
Confidence 444432100 0 000 012345677778888975432 1 236799986 3456888999999999
Q ss_pred HHHHHHHHhhcC
Q 010125 505 QQHLEAFQSAFK 516 (517)
Q Consensus 505 ~~~~~~l~~~~~ 516 (517)
.++..++.++||
T Consensus 446 ~~~l~~~~~~~~ 457 (459)
T PRK06082 446 EEAIAKICQDFN 457 (459)
T ss_pred HHHHHHHhhhcc
Confidence 999999988876
No 337
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.32 E-value=3.9e-09 Score=109.99 Aligned_cols=318 Identities=10% Similarity=-0.011 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
..+.++.+.|.+++.-+- ...+|+++||+|+..|+..||.....+ |..+ ...+|.....-|-...-+..+.
T Consensus 87 ~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~ 157 (429)
T PRK06173 87 EPAVELAQKLLEILPPSL-------NKIFFADSGSVAVEVAMKMALQYQQAK-GEVQ-RTKFATIRSGYHGDTWHAMSVC 157 (429)
T ss_pred HHHHHHHHHHHhhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCCcchhhhccC
Confidence 344566677777653211 257999999999999999999753222 2111 2234444444554322222221
Q ss_pred CC----------CCCCEEEEecCCCC---C-cccCHHHHHHHHHHhHhcCCcceEEEeecc-CCccccccC----hhHHH
Q 010125 213 GI----------DVKNFRAIKTTKSS---S-YGLSPDSLMAQINSDVEVGLIPLFLCATIG-TTAITAVDP----LKPLC 273 (517)
Q Consensus 213 G~----------g~~~v~~vp~d~~~---~-~~~d~~~Le~~i~~~~~~g~~p~~vv~t~g-tt~~G~idp----l~eI~ 273 (517)
|- ....+..+|..... . ..-+++.|++.|... +..+.+|++.-. ....|.+-| +++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~---~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~ 234 (429)
T PRK06173 158 DPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQK---GDEIAALILEPVVQGAGGMYFYSPTYLVKAR 234 (429)
T ss_pred CCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhC---CCcEEEEEEcchhhccCCcccCCHHHHHHHH
Confidence 10 01123444432100 0 012466777777532 223455666543 444465522 89999
Q ss_pred HHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCc--cccCC
Q 010125 274 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNP--EYLKN 350 (517)
Q Consensus 274 ~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~--~yl~~ 350 (517)
++|++||+++++|.++.|+.-...-+.....++ ..|.++ +.|.++..+ .+|.++++++ +.+.+.... .+...
T Consensus 235 ~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~--~gK~l~gG~~p~~a~~~~~~--i~~~~~~~~~~~~~~~ 309 (429)
T PRK06173 235 ELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMC--IGKALTGGYLTLSATITTEA--IAQTICSGEAKCFMHG 309 (429)
T ss_pred HHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEE--eehhhhCCccccceEEecHH--HHHHHhcCCCCccccC
Confidence 999999999999999966422111111111233 478777 689987663 6777777654 222332110 11110
Q ss_pred ccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEe
Q 010125 351 KATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP--CHFAVVCFRV 428 (517)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~--~~~~~v~f~~ 428 (517)
.|.. +.+.......++++.+-.+ +..++..++.++|++.|++..++..+.. -...++.+.+
T Consensus 310 -------------~T~~-g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel 372 (429)
T PRK06173 310 -------------PTFM-ANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEM 372 (429)
T ss_pred -------------CCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEe
Confidence 0111 1122333445555555333 3466777788888888875423332222 1234455555
Q ss_pred cCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 429 SPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
... .....+.+.|.++|... .+. | .++|+.. ....+++|+++++++|.++.
T Consensus 373 ~~~-----------------------~~~~~i~~~l~e~Gi~v-~~~---g-~~l~~~P-pl~it~~ei~~~~~~l~~~l 423 (429)
T PRK06173 373 KEP-----------------------VNMATLQPRFVEHGIWV-RPF---G-KLVYIMP-PFIISPDELSQLTSGLLRVL 423 (429)
T ss_pred CCc-----------------------ccHHHHHHHHHHCCeEE-Eec---C-CEEEEeC-CccCCHHHHHHHHHHHHHHH
Confidence 322 11356777888888643 322 3 4799987 56788999999999999998
Q ss_pred HHHHh
Q 010125 509 EAFQS 513 (517)
Q Consensus 509 ~~l~~ 513 (517)
.++.+
T Consensus 424 ~~~~~ 428 (429)
T PRK06173 424 KQEYN 428 (429)
T ss_pred HHHhc
Confidence 77654
No 338
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.31 E-value=1.1e-08 Score=107.20 Aligned_cols=322 Identities=12% Similarity=0.050 Sum_probs=172.6
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
++.+.++.+.|++++.-... ....|+++||+||..|+..||... | .+.+|......|-...-+..+
T Consensus 84 ~~~~~~lae~L~~~~p~~~~------~~v~f~~SGseA~e~AiklAr~~t----g----r~~ii~~~~~YHG~t~~als~ 149 (445)
T PRK08593 84 HEPLVRLAKKLCELAPGDFE------KRVTFGLSGSDANDGIIKFARAYT----G----RPYIISFTNAYHGSTYGSLSM 149 (445)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh----C----CCeEEEECCCcCCCcHHHHhh
Confidence 34455566777777632210 157899999999999999998752 1 223444444556544444444
Q ss_pred cCCC----------CCCEEEEecCCCCC---cccCH-------HHHHHHHHHhHhcCCcceEEEeeccCCccccccC---
Q 010125 212 VGID----------VKNFRAIKTTKSSS---YGLSP-------DSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP--- 268 (517)
Q Consensus 212 ~G~g----------~~~v~~vp~d~~~~---~~~d~-------~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp--- 268 (517)
.+.. ...+..+|...... ..-+. +++++.+.... ......+|++.......|.+-|
T Consensus 150 s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~ 228 (445)
T PRK08593 150 SGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPG 228 (445)
T ss_pred cCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHH
Confidence 3321 11244455321100 00112 33444443211 0123456666666666677766
Q ss_pred -hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 010125 269 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 -l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
+++|.++|++||+++++|+++.|+.....-+....-++ ..|.++ ..|.++..+..|+++.+++ +.+.+.. ..+
T Consensus 229 yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t--~gK~l~~G~p~gav~~~~~--i~~~~~~-~~~ 302 (445)
T PRK08593 229 YFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMS--FGKSLAGGMPMSAIVGRKE--IMESLEA-PAH 302 (445)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEee--ecccccCCcccEEEEEcHH--HHhhhcc-CCC
Confidence 99999999999999999999976532211100001133 467665 5788876667888887643 2233321 111
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFAVV 424 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~~v 424 (517)
. ++. .+.+....+..++++.+-.+ +.+++..++.++|++.|+++. ...++... ...++
T Consensus 303 ~---------------~T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~ 363 (445)
T PRK08593 303 L---------------FTT-GANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSI 363 (445)
T ss_pred C---------------CCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEE
Confidence 1 111 11112223344455544333 455666777777777776431 11111111 11222
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.+.+..... .... .......+...+.++|.+. .+. +...+|++. ....+++||+++++++
T Consensus 364 gi~l~~~~~------------~~~~---~~~~~~~~~~~~~~~Gv~~-~~~---~~~~lr~~p-~l~~t~~~id~~~~~l 423 (445)
T PRK08593 364 GIDIVSDKK------------LKTR---DNEAALKICNYCFEHGVVI-IAV---AGNVLRFQP-PLVITYEQLDTALNTI 423 (445)
T ss_pred EEEEecCCC------------cCCC---cHHHHHHHHHHHHHCCeEE-ecc---CCCEEEEEC-CCccCHHHHHHHHHHH
Confidence 333322100 0000 0233466788888889654 221 235799998 4677888999999999
Q ss_pred HHHHHHHHh
Q 010125 505 QQHLEAFQS 513 (517)
Q Consensus 505 ~~~~~~l~~ 513 (517)
.++..++.+
T Consensus 424 ~~~l~~~~~ 432 (445)
T PRK08593 424 EQAFTALEA 432 (445)
T ss_pred HHHHHHHhc
Confidence 999877653
No 339
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.31 E-value=1.4e-08 Score=105.87 Aligned_cols=320 Identities=12% Similarity=0.025 Sum_probs=172.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
++.+.++.+.+.+++.-+.. ...+|+++||+||..|+..||... | ...+|.....-|-...-+..+
T Consensus 82 ~~~~~~la~~l~~~~p~~~~------~~v~f~~SGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~~~ 147 (425)
T PRK07495 82 YENYVRLAERLNALVPGDFA------KKTIFVTTGAEAVENAVKIARAAT----G----RSAVIAFGGGFHGRTFMGMSL 147 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh----C----CCeEEEECCCcCCccHHHhhh
Confidence 33445567777777642110 157999999999999999998752 1 222444444455333222222
Q ss_pred cCC--------C--CCCEEEEecCCCCCcccC----HHHHHHHHHHhHhcCCcceEEEeeccCCcccccc----ChhHHH
Q 010125 212 VGI--------D--VKNFRAIKTTKSSSYGLS----PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD----PLKPLC 273 (517)
Q Consensus 212 ~G~--------g--~~~v~~vp~d~~~~~~~d----~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id----pl~eI~ 273 (517)
.|. + ...++.+|...... .++ ++++++.++... .+..+.+|++.-.....|.+- -+++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~ 225 (425)
T PRK07495 148 TGKVVPYKVGFGAMMPDVYHVPFPVELH-GVSVEQSLAALDKLFKADV-DPQRVAAIIIEPVQGEGGFYPAPAAFMKALR 225 (425)
T ss_pred cCCCcccccCCCCCCCCeEEecCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHH
Confidence 221 1 11355566532111 133 444566664311 122345666665444566543 389999
Q ss_pred HHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 010125 274 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKAT 353 (517)
Q Consensus 274 ~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 353 (517)
++|++||+++++|.++.|+.....-+.....++ ..|.++ +.|.++..+..|+++.+++ +.+.+.. ....
T Consensus 226 ~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~pDi~t--lsK~l~~G~pigav~~~~~--i~~~~~~--~~~~---- 294 (425)
T PRK07495 226 ELCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AADLTT--MAKGLAGGFPLAAVTGRAE--IMDAPGP--GGLG---- 294 (425)
T ss_pred HHHHHcCCEEEEechhhcCCcCCCceeecccCC-CCCEEe--ehhhhcCCccceEEEEcHH--HHhccCC--CCcC----
Confidence 999999999999999987533221110001122 356544 5799987777888887543 2222211 0000
Q ss_pred cccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCe-EEecCCCeeEEEEEe
Q 010125 354 ESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRF-EIVFPCHFAVVCFRV 428 (517)
Q Consensus 354 ~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~-~l~~~~~~~~v~f~~ 428 (517)
.++ .+.........++++.+..+ +..++..++.++|++.|++ .|.+ ++-. . ..++.+.+
T Consensus 295 ----------~T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG-~-Gl~~~iel 358 (425)
T PRK07495 295 ----------GTY-GGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRG-P-GFMNAVEF 358 (425)
T ss_pred ----------CCC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec-C-ceEEEEEE
Confidence 011 11111222233455555333 3445556666777666654 3322 1111 1 23444444
Q ss_pred cCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 429 SPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
.+... .... ......+.+.+.++|.+... .... ..++|+.. ....+++++++++++|.++.
T Consensus 359 ~~~~~-------------~~~~---~~~~~~~~~~~~~~Gvl~~~-~g~~-~~~~r~~P-pl~it~~~id~~~~~l~~~l 419 (425)
T PRK07495 359 NDADS-------------GLPS---AEFANRVRLKALEKGLILLT-CGVH-GNVIRFLA-PITIQDDVFAEALDILEASI 419 (425)
T ss_pred ecCCC-------------CCcc---HHHHHHHHHHHHHCCeEEee-cCCC-CCEEEEeC-CCccCHHHHHHHHHHHHHHH
Confidence 33210 0000 12356677888888975422 2111 36799987 46788999999999999998
Q ss_pred HHHHh
Q 010125 509 EAFQS 513 (517)
Q Consensus 509 ~~l~~ 513 (517)
+++..
T Consensus 420 ~~~~~ 424 (425)
T PRK07495 420 LEASA 424 (425)
T ss_pred HHHhc
Confidence 87653
No 340
>PRK07678 aminotransferase; Validated
Probab=99.31 E-value=8.5e-09 Score=108.27 Aligned_cols=328 Identities=11% Similarity=0.066 Sum_probs=173.7
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
+.+.++.+.|.++++... ..+|+++||+|+..|+..||..... .|..+ ...+|.....-|-...-+....
T Consensus 89 ~~~~~lae~l~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~t~~-~g~~~-r~~ii~~~~~yHG~t~~als~~ 158 (451)
T PRK07678 89 EPAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYHAQ-KGEPH-RYKFISRYRAYHGNSMGALAAT 158 (451)
T ss_pred HHHHHHHHHHHHhCCCCC--------EEEEeCCcHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCcCCccHHHhhcC
Confidence 344556677777765421 4789999999999999999875321 12111 1233444444454333333332
Q ss_pred CCC---------CCCEEEEecCCCCCccc---------C---HHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---
Q 010125 213 GID---------VKNFRAIKTTKSSSYGL---------S---PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP--- 268 (517)
Q Consensus 213 G~g---------~~~v~~vp~d~~~~~~~---------d---~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp--- 268 (517)
|.. ...+..+|... .++. + ++.+++.|+.. .+..+.+|++.-.....|.+-|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~~ 234 (451)
T PRK07678 159 GQAQRKYKYEPLAPGFLHVPPPD--CYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQD 234 (451)
T ss_pred CCcccccccCCCCCCCEEeCCCc--cccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCHH
Confidence 210 11234444321 1111 1 23356666421 1234556666655555676655
Q ss_pred -hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCcc
Q 010125 269 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNPE 346 (517)
Q Consensus 269 -l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~~ 346 (517)
++++.++|++||+.|++|..+.|+.....-+....-|+ ..|.+++ .|.++.. ++.|+++++++- .+.+.....
T Consensus 235 fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~i--~~~~~~~~~ 309 (451)
T PRK07678 235 YMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITSAYLPLSATAVKKEI--YEAFKGKGE 309 (451)
T ss_pred HHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--ecccccCCcceeEEEEcHHH--HHHHhccCc
Confidence 89999999999999999999977643221111111234 5888876 7988766 478888886542 233322110
Q ss_pred c--cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCC
Q 010125 347 Y--LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCH 420 (517)
Q Consensus 347 y--l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~ 420 (517)
+ +.. ..|+ .+.+.......++++.+-.+ +++++..++.++|.+.|++ .+.+.-+ .-.
T Consensus 310 ~~~~~h------------~~T~-~gnp~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v-rg~ 372 (451)
T PRK07678 310 YEHFRH------------VNTF-GGNPAACALALKNLEIMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDI-RGK 372 (451)
T ss_pred cccccc------------CCCC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE-Eee
Confidence 0 000 0011 11111223334445544333 3455666677777776643 3321111 111
Q ss_pred eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEee--eeECCEeEEEEEecCCCCcHHHHH
Q 010125 421 FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTH--AVLGGIYAIRFATGATLTEKRHVV 498 (517)
Q Consensus 421 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~--~~~~g~~~lR~~~~~~~t~~~di~ 498 (517)
..++.+.+..... +....+ .....++.+.+.++|.+.... ++..+...+|++. ....+++||+
T Consensus 373 Gl~~~i~~~~~~~----------~~~~~~----~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~P-pl~it~~eid 437 (451)
T PRK07678 373 GLLVGIELVNDKE----------TKEPAD----NDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSP-PLVISSEEIA 437 (451)
T ss_pred ceEEEEEEecCCc----------ccCcCc----hHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEEC-CCcCCHHHHH
Confidence 2334444432100 000000 133567788888899754321 1113346799987 4566788999
Q ss_pred HHHHHHHHHHHHH
Q 010125 499 VAWTVVQQHLEAF 511 (517)
Q Consensus 499 ~l~~~l~~~~~~l 511 (517)
++++++.++.+++
T Consensus 438 ~~~~~l~~~l~~~ 450 (451)
T PRK07678 438 FIVGTLKTALERI 450 (451)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887754
No 341
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.30 E-value=7.5e-10 Score=104.18 Aligned_cols=333 Identities=14% Similarity=0.145 Sum_probs=185.7
Q ss_pred HHHHHHhc-ccccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhccc
Q 010125 110 LGEMLSSG-FNIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRE 188 (517)
Q Consensus 110 ~~~~l~~~-~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~ 188 (517)
.++++++. +..+...|....+-..+-+.++..+.+.+|+.-+. .++.+|+|+..+.+.+.-.. -.+. .+
T Consensus 54 ~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~-----~NIalTnGSQs~fFYlfNlF----~G~~-sd 123 (417)
T COG3977 54 LAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA-----QNIALTNGSQSAFFYLFNLF----AGRR-SD 123 (417)
T ss_pred HHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-----ceeeecCCccchHHHHHHHh----cCcc-CC
Confidence 34555544 33344566666677778889999999999997542 47899998877766543221 1110 11
Q ss_pred CCCCeEEEeCCCCchHHHHHHHHcCCCCC--CEEEE----ecCCCC--CcccCHHHHHHHHHHhHhcCCcceEEEeeccC
Q 010125 189 NISKLIVYGSDQTHCALQKAAQIVGIDVK--NFRAI----KTTKSS--SYGLSPDSLMAQINSDVEVGLIPLFLCATIGT 260 (517)
Q Consensus 189 ~~~~~~v~~s~~~H~s~~kaa~~~G~g~~--~v~~v----p~d~~~--~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gt 260 (517)
|..+-+++-=.+.+.. +.++|.+ .++.+ ..++.+ .++.|.++|+ +.+.+ -+|+++-+|
T Consensus 124 G~~k~illPLaPeYiG------Y~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~------g~ic~SRPt 189 (417)
T COG3977 124 GTEKKILLPLAPEYIG------YADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLH--IGEST------GAICVSRPT 189 (417)
T ss_pred CcceeEeeccChhhcc------ccccccCccceeeccCCcccccccceeeccCHHHcc--ccccc------ceEEecCCC
Confidence 2222223211222221 2222221 22221 112222 3677888875 23333 289999999
Q ss_pred Cccccc---cChhHHHHHHHHhCCeEEcccccccccc--cCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCch
Q 010125 261 TAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSAC--ICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPR 335 (517)
Q Consensus 261 t~~G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~--~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~ 335 (517)
++||.+ +.+.+|.++|++||+.+++|-|||..+- .+.+.... ...--..|+|.+|.+.....||+++..++
T Consensus 190 NPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~---w~~NiilC~SLSK~GLPG~R~GIiIane~- 265 (417)
T COG3977 190 NPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPL---WNENIILCMSLSKLGLPGSRCGIIIANEK- 265 (417)
T ss_pred CCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccccc---CCCCEEEEeehhhcCCCCcceeEEEccHH-
Confidence 999988 5688999999999999999999976542 11111111 11223678999999887788998876433
Q ss_pred hHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHH----HHHHhcHHHHHHHHHHHHH-HHHHHHHHHhcC
Q 010125 336 ALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWF----VIRNYGVANLRHFLRSHVN-MAKLFERLVSGD 410 (517)
Q Consensus 336 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~----~l~~~g~~g~~~~i~~~~~-~a~~l~~~l~~~ 410 (517)
+.+++.....-+ ++..+|-..|++.-+ .+..+..+-++-..+...+ .-..+++.|-+.
T Consensus 266 -viqaitnmn~ii----------------sLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~ 328 (417)
T COG3977 266 -VIQAITNMNGII----------------SLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEY 328 (417)
T ss_pred -HHHHHHhcccee----------------eecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCcc
Confidence 233443221111 122222222222111 1111112222222121111 122233334332
Q ss_pred CCeEEecCCCeeEEEE-EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE---------CCE
Q 010125 411 KRFEIVFPCHFAVVCF-RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL---------GGI 480 (517)
Q Consensus 411 ~~~~l~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~g~ 480 (517)
.+.+ ..|+..++.+ |+..- -.....|+++|.++|.+++++..+ ...
T Consensus 329 -~~~i-HkpEGAIFlWLWf~dL----------------------PItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~h 384 (417)
T COG3977 329 -RCLI-HKPEGAIFLWLWFKDL----------------------PITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTH 384 (417)
T ss_pred -ceee-ecCCcceeehhhhccC----------------------CCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCcc
Confidence 2333 4677766643 44332 123578999999999988776543 235
Q ss_pred eEEEEEecCCCCcHHHHHHHHHHHHHHHHHHHhh
Q 010125 481 YAIRFATGATLTEKRHVVVAWTVVQQHLEAFQSA 514 (517)
Q Consensus 481 ~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~~~ 514 (517)
.|+|+++.. +++.|+.-+.+|.+..+++..+
T Consensus 385 qC~Rmn~~~---~~~~ie~Gva~lae~ve~~yq~ 415 (417)
T COG3977 385 QCMRMNYVP---EPEKIEKGVAILAEEVERAYQE 415 (417)
T ss_pred ceEEEecCC---CHHHHHHHHHHHHHHHHHHHhc
Confidence 699998753 6778999998888888877654
No 342
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.30 E-value=7.1e-09 Score=109.10 Aligned_cols=326 Identities=12% Similarity=0.038 Sum_probs=169.4
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+..+.++.+.|.+++.-+.. ....|+++||+|+..|+..||... | ...+|-....-|-...-+..+
T Consensus 96 ~~~~~~la~~L~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~ls~ 161 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFD------KKVLFLNSGAEAVENAVKIARKYT----K----RQGIISFSRGFHGRTLMTMTM 161 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCC------CEEEEcCCcHHHHHHHHHHHHHHh----C----CCcEEEECCCcCccchhhhhh
Confidence 34556677778887642211 157999999999999999998752 1 222343443445333333332
Q ss_pred cCC--------C--CCCEEEEecCCC--CCcccC--------HHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---
Q 010125 212 VGI--------D--VKNFRAIKTTKS--SSYGLS--------PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP--- 268 (517)
Q Consensus 212 ~G~--------g--~~~v~~vp~d~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp--- 268 (517)
.|- + ...+..+|.... ....+. .+.+++.+.... .+..+.+|++.-.....|.+-|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~~ 240 (451)
T PRK06918 162 TSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSKK 240 (451)
T ss_pred cCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCHH
Confidence 221 0 112344443100 000111 223444442111 1223445555544444465432
Q ss_pred -hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 010125 269 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 -l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
+++|.++|++||+|++.|..|.++...........-++ ..|.+ ++.|.++..+..|+++.+++ +.+.+... .
T Consensus 241 ~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~--t~sK~l~~G~pig~v~~~~~--i~~~~~~~--~ 313 (451)
T PRK06918 241 FVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLI--TVSKSLGAGVPISGVIGRKE--IMDESAPG--E 313 (451)
T ss_pred HHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEE--eeehhhcCCCccEEEEEcHH--HHhccCCC--C
Confidence 88999999999999999999987643221111000112 36644 56899987788999988633 22222110 0
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCHFAV 423 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~~~~ 423 (517)
.. .++ ++.........++++.+..+.+. ++..++.+++.+.|++ .+.+.-+ .....+
T Consensus 314 ~~--------------~T~-~g~~l~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~l~~~~~~~~~v-rg~G~~ 374 (451)
T PRK06918 314 LG--------------GTY-AGSPLGCAAALAVLDIIEKENLN---DRAIELGKVVMNRFEEMKNKYNCIGDV-RGLGAM 374 (451)
T ss_pred cC--------------cCC-CcCHHHHHHHHHHHHHHHHCCHH---HHHHHHHHHHHHHHHHHHhhCCCceee-ccceeE
Confidence 00 011 11111222222344444333333 3444455566555544 3322112 233444
Q ss_pred EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 010125 424 VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTV 503 (517)
Q Consensus 424 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~ 503 (517)
+.+.+..... .... -.....++.+.+.++|..+.+...+ + .++|+++. ...++++|++++++
T Consensus 375 ~~~~~~~~~~------------~~~~---~~~~~~~l~~~~~~~Gvlv~~~~~~-~-~~lrl~p~-l~~t~~~id~~l~~ 436 (451)
T PRK06918 375 CAFELVQDRK------------TKEP---DKTLTANICKEANKRGLLLLSAGTY-G-NVIRVLMP-LVITDEQLEEGLTI 436 (451)
T ss_pred EEEEEccCCC------------cCCC---cHHHHHHHHHHHHHCCeEEeecCCC-C-CEEEEECC-CccCHHHHHHHHHH
Confidence 4444421100 0000 0234567788888899765443222 2 57999973 34678899999999
Q ss_pred HHHHHHHHHhhcC
Q 010125 504 VQQHLEAFQSAFK 516 (517)
Q Consensus 504 l~~~~~~l~~~~~ 516 (517)
|.++.+++..+.|
T Consensus 437 l~~~l~~~~~~~~ 449 (451)
T PRK06918 437 IEESLQACYEKAN 449 (451)
T ss_pred HHHHHHHHHHhhc
Confidence 9999988766543
No 343
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.29 E-value=2.1e-09 Score=112.98 Aligned_cols=313 Identities=11% Similarity=0.023 Sum_probs=167.9
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
.+..+.++.+.+++++..- ....|+++||||+..|+..||... | .+.+|-.....|-...-...
T Consensus 137 ~~~~~~~lAe~l~~~~p~~--------~~v~f~~SGsEA~e~AlklAR~~t----g----r~~Ii~~~g~YHG~~~~~~~ 200 (474)
T PLN02482 137 PCLLENVLAEMVIDAVPSV--------EMVRFVNSGTEACMGVLRLARAYT----G----REKIIKFEGCYHGHADSFLV 200 (474)
T ss_pred CCHHHHHHHHHHHHhCCCC--------CEEEEeCChHHHHHHHHHHHHHhc----C----CCEEEEECCccCCCcchhhh
Confidence 3456677788888876321 157999999999999999998752 1 12233333334432111110
Q ss_pred H--cCC---------CC-----CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hh
Q 010125 211 I--VGI---------DV-----KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LK 270 (517)
Q Consensus 211 ~--~G~---------g~-----~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~ 270 (517)
. .|. |. ..+..+|. -|+++|++.+++. +..+.+|++.......|.+-| ++
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~ 270 (474)
T PLN02482 201 KAGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLE 270 (474)
T ss_pred hcCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHH
Confidence 0 011 00 01222221 1789999988642 223456676666666787766 56
Q ss_pred HHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCC
Q 010125 271 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKN 350 (517)
Q Consensus 271 eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~ 350 (517)
+|.++|++||+.+++|.++.|+ ..........-|+ ..|.+++ .|.++..+.+|.+..+++ . .+.+.....+...
T Consensus 271 ~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~e-i-~~~~~~~~~~~~~ 344 (474)
T PLN02482 271 GLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRRE-I-MEMVAPAGPMYQA 344 (474)
T ss_pred HHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcHH-H-HHhhccCCCcccc
Confidence 8999999999999999999665 3222111111233 5787655 799987777899876543 2 2333211111100
Q ss_pred ccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC---CeEEe-cCCCeeEEEE
Q 010125 351 KATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK---RFEIV-FPCHFAVVCF 426 (517)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~---~~~l~-~~~~~~~v~f 426 (517)
.|+. +.+....+..++|+.+..+ +..++..++.++|++.|+++- ++.++ .... +++.+
T Consensus 345 -------------~T~~-gnpl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~-g~~gi 406 (474)
T PLN02482 345 -------------GTLS-GNPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKKAGHEMCGGYIS-GMFGF 406 (474)
T ss_pred -------------cCcc-hhHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccc-eEEEE
Confidence 0111 1111222334455555332 456677778888888876531 12222 2222 24333
Q ss_pred EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 427 RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
.+......... +. ...+ .....++.+.+.++|..+ .+..... ++ + +...+++|||++++++.+
T Consensus 407 ~f~~~~~~~~~----~~-----~~~d-~~~~~~~~~~l~~~Gv~~-~~~~~~~----~~-p-sl~ht~~dId~~l~al~~ 469 (474)
T PLN02482 407 FFTEGPVYNFA----DA-----KKSD-TAKFARFHRGMLEEGVYL-APSQFEA----GF-T-SLAHTEEDIDFTIAAAER 469 (474)
T ss_pred EEecCCccChh----hh-----ccCC-HHHHHHHHHHHHHCCeEE-eccCCCC----Cc-C-CCCCCHHHHHHHHHHHHH
Confidence 33221000000 00 0000 123456777888888644 3321111 11 2 456688899999999998
Q ss_pred HHHH
Q 010125 507 HLEA 510 (517)
Q Consensus 507 ~~~~ 510 (517)
+.++
T Consensus 470 ~l~~ 473 (474)
T PLN02482 470 VLAR 473 (474)
T ss_pred HHHh
Confidence 8765
No 344
>PRK07480 putative aminotransferase; Validated
Probab=99.29 E-value=5.1e-09 Score=109.95 Aligned_cols=333 Identities=11% Similarity=0.018 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCe-EEEeCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKL-IVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~-~v~~s~~~H~s~~kaa~ 210 (517)
...+.++.+.|.++++-+- ...+|+++||+|+..|+..||.....+ |.. .+. +|.....-|-...-+..
T Consensus 93 ~~~~~~lae~L~~~~p~~~-------~~v~f~~SGseA~e~AlklAr~~~~~~-g~~--~r~~ii~~~~~yHG~tl~a~s 162 (456)
T PRK07480 93 HPPAIELAAKLAEVAPPGF-------NHVFFTNSGSEANDTVLRMVRHYWALK-GKP--QKKVIISRKNGYHGSTVAGAS 162 (456)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEECCCcCCcchhhhh
Confidence 3445566777777764221 257899999999999999998753211 211 233 33344444543322222
Q ss_pred HcCC-------C--CCCEEEEecCCC--CCcccC--------HHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---
Q 010125 211 IVGI-------D--VKNFRAIKTTKS--SSYGLS--------PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP--- 268 (517)
Q Consensus 211 ~~G~-------g--~~~v~~vp~d~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp--- 268 (517)
+.|. | ...+..+|.... .....+ ++.|++.+.+. .+..+.+|++.-.....|.+-|
T Consensus 163 ~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~ 240 (456)
T PRK07480 163 LGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPAT 240 (456)
T ss_pred ccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHH
Confidence 2221 0 112333332100 000011 35666555431 1123456666655555677665
Q ss_pred -hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCcc
Q 010125 269 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPE 346 (517)
Q Consensus 269 -l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~ 346 (517)
+++|.++|++||+.+++|..+.|+.-...-+.....|+ ..|.+++ .|.++..+ +.|.++++++ +.+.+.....
T Consensus 241 yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~~ 315 (456)
T PRK07480 241 YWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR--VAEVLIEEGG 315 (456)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH--HHHHHhcCCC
Confidence 99999999999999999999977643221111111233 4787665 79887654 5788887644 2233311111
Q ss_pred ccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHH-HHHHHHHHHHHhcCCCeEEecCC--CeeE
Q 010125 347 YLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSH-VNMAKLFERLVSGDKRFEIVFPC--HFAV 423 (517)
Q Consensus 347 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~-~~~a~~l~~~l~~~~~~~l~~~~--~~~~ 423 (517)
.+... .|+ .+.+....+..++|+.+-.++ .+++. .++.++|.+.|+++....++... ...+
T Consensus 316 ~~~~~------------~T~-~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm 379 (456)
T PRK07480 316 EFNHG------------FTY-SGHPVAAAVALANLRILRDEG---IVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLV 379 (456)
T ss_pred CcccC------------CCC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecce
Confidence 01000 011 111222234444555554433 34455 35666666666543222111111 1223
Q ss_pred EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 010125 424 VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTV 503 (517)
Q Consensus 424 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~ 503 (517)
+.+.+..... ... ...........+.+.+.++|.+.. + .+ ..+|++. ....+++|||+++++
T Consensus 380 ~gie~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~Gll~~-~---~~-~~l~~~P-pl~it~~eid~~~~~ 441 (456)
T PRK07480 380 GAIELVKDKA----------TRE--RFEAGGGVGTICRDHCFANGLIMR-A---VG-DRMIISP-PLVITHAEIDELVEK 441 (456)
T ss_pred EEEEEecccc----------ccc--cCcchhhHHHHHHHHHHHCCcEEe-e---cC-CEEEEEC-CCCCCHHHHHHHHHH
Confidence 3343422100 000 000001233567777888897542 2 12 4689886 456688999999999
Q ss_pred HHHHHHHHHhhc
Q 010125 504 VQQHLEAFQSAF 515 (517)
Q Consensus 504 l~~~~~~l~~~~ 515 (517)
|.++..++.+|.
T Consensus 442 l~~al~~~~~~~ 453 (456)
T PRK07480 442 ARKALDATAAEL 453 (456)
T ss_pred HHHHHHHHHHHh
Confidence 999998886653
No 345
>PRK07482 hypothetical protein; Provisional
Probab=99.29 E-value=1.3e-08 Score=107.17 Aligned_cols=336 Identities=10% Similarity=0.002 Sum_probs=175.8
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEE-eCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVY-GSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~-~s~~~H~s~~kaa~ 210 (517)
++.+.++.+.|.+++.-+- ....|+++||+|+..|+..||.....+ |.. ++..|+ ....-|-...-+..
T Consensus 93 ~~~~~~lAe~L~~~~p~~~-------~~v~f~~sGSEAve~AlKlAr~~~~~~-g~~--~r~~Ii~~~~~YHG~t~ga~s 162 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGM-------SKVYYGLSGSDANETQIKLVWYYNNVL-GRP--EKKKIISRWRGYHGSGVVTGS 162 (461)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCchHHHHHHHHHHHHHHHHhc-CCC--CCceEEEecCccCCccHhhhh
Confidence 4556667777888763211 157899999999999999998653221 211 233343 34344432221222
Q ss_pred HcC---------CCCCCEEEEecCCCCCc-----------ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC--
Q 010125 211 IVG---------IDVKNFRAIKTTKSSSY-----------GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP-- 268 (517)
Q Consensus 211 ~~G---------~g~~~v~~vp~d~~~~~-----------~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp-- 268 (517)
+.| .....+..+|.....+. .-++++|++.+... ....+.+|++.-.....|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~ 240 (461)
T PRK07482 163 LTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPA 240 (461)
T ss_pred ccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCH
Confidence 221 11113334432210000 01467778777532 1123456666654444565532
Q ss_pred --hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCc
Q 010125 269 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNP 345 (517)
Q Consensus 269 --l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~ 345 (517)
+++|.++|++||+.|++|..+.|+.....-+.....|+ ..|.+++ -|.++..+ +.|.++++++ +.+.+....
T Consensus 241 ~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~--i~~~~~~~~ 315 (461)
T PRK07482 241 GYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITV--AKGLTSAYAPLSGSIVGEK--VWDVLEQGS 315 (461)
T ss_pred HHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEE--ccccccCccccceeeecHH--HHHHHhccc
Confidence 89999999999999999999987754332222112234 5888886 69987665 6777777644 222332111
Q ss_pred cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCe
Q 010125 346 EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCHF 421 (517)
Q Consensus 346 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~~ 421 (517)
... .. . ....|+ .+.+.......++++.+-.++ ..++..++.++|.+.|++ .|.+.-+ .-..
T Consensus 316 ~~~--~~------~-~h~~T~-~gnpl~~Aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rG~G 381 (461)
T PRK07482 316 DEH--GA------I-GHGWTY-SGHPICAAAALANLDILEREN---LVGNAAEVGAYFRARLRAAFGDHPLVGEV-RGVG 381 (461)
T ss_pred ccC--Cc------c-ccCCCC-CcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEE-eece
Confidence 000 00 0 000011 111122233444455554433 445556677777777653 3322111 1112
Q ss_pred eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHH
Q 010125 422 AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAW 501 (517)
Q Consensus 422 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~ 501 (517)
.++.+.+..... ++...+. ......++.+.+.++|.+.. ... +...+|+.. ....+++||++++
T Consensus 382 lm~giel~~~~~----------~~~~~~~--~~~~~~~i~~~~~~~Gvl~~-~~~--~~~~i~~~P-pl~it~~ei~~~~ 445 (461)
T PRK07482 382 MLAAVEFVADRD----------DRTPFDP--ALKIGPQVSAAALERGVIAR-AMP--HGDILGFAP-PLVLTRAEADEIV 445 (461)
T ss_pred eEEEEEeccCCC----------cCCCCCh--hhHHHHHHHHHHHHCCcEEe-cCC--CCCEEEEeC-CCCCCHHHHHHHH
Confidence 233344432100 0000000 01235678888888996542 211 125789886 4677899999999
Q ss_pred HHHHHHHHHHHhh
Q 010125 502 TVVQQHLEAFQSA 514 (517)
Q Consensus 502 ~~l~~~~~~l~~~ 514 (517)
+++.+..+++.++
T Consensus 446 ~~l~~~l~~~~~~ 458 (461)
T PRK07482 446 AIAKDAVDEVLGR 458 (461)
T ss_pred HHHHHHHHHHHHH
Confidence 9999998877554
No 346
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.28 E-value=3.8e-09 Score=110.22 Aligned_cols=311 Identities=12% Similarity=0.010 Sum_probs=168.4
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCC
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGI 214 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~ 214 (517)
..++.+.+.++++-+- ....|+.+||+|+..|+..||.....+ |..+ ...+|..+...|-...-+..+.|-
T Consensus 90 ~~~la~~l~~~~~~~~-------~~v~f~~sGseA~e~AlklAr~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~~~~ 160 (427)
T TIGR00508 90 AIELCQKLVKMTPNAL-------DCVFLADSGSVAVEVALKMALQYWQAK-GEKN-RQKFLTIRSGYHGDTFGAMSVCDP 160 (427)
T ss_pred HHHHHHHHHhhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhh-CCCC-ccEEEEEcCCcCCccHhhhcccCC
Confidence 3456677777764221 257999999999999999998764321 2111 233455555556433333332221
Q ss_pred C----------CCCEEEEecCCCCCc-----ccCHHHHHHHHHHhHhcCCcceEEEeecc-CCcccc----ccChhHHHH
Q 010125 215 D----------VKNFRAIKTTKSSSY-----GLSPDSLMAQINSDVEVGLIPLFLCATIG-TTAITA----VDPLKPLCD 274 (517)
Q Consensus 215 g----------~~~v~~vp~d~~~~~-----~~d~~~Le~~i~~~~~~g~~p~~vv~t~g-tt~~G~----idpl~eI~~ 274 (517)
. ...+..+|.. ...+ .-|++++++.+.+. +....+|++... ....|. .+++++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~ 236 (427)
T TIGR00508 161 ENSMHSLYKGYLPEQIFAPAP-QNRFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQA 236 (427)
T ss_pred cccccccccccCCCCeEcCCC-CccccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHH
Confidence 0 0112233221 0011 12567788887642 122345555543 333343 367999999
Q ss_pred HHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCC--ccccCCc
Q 010125 275 VAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTN--PEYLKNK 351 (517)
Q Consensus 275 i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~--~~yl~~~ 351 (517)
+|++||+.+++|.++.|+.....-+.....++ ..|.++ ..|.++..+ .++.++.++. +.+.+... ..+....
T Consensus 237 lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~--~gK~l~gG~~p~~a~~~~~~--~~~~~~~~~~~~~~~~~ 311 (427)
T TIGR00508 237 LCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILC--VGKALTGGYMTLSATVTTDK--VAQTISSGEAGCFMHGP 311 (427)
T ss_pred HHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEE--echhhhcCcccceEEEEcHH--HHHHHhcCCCCccccCC
Confidence 99999999999999966422211111111233 578776 589987663 5677776543 22333211 1111100
Q ss_pred cccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEEEEec
Q 010125 352 ATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP--CHFAVVCFRVS 429 (517)
Q Consensus 352 ~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~--~~~~~v~f~~~ 429 (517)
++. +.........++++.+..+ +..++..++.++|++.|+++.....+.. -...++.+.+.
T Consensus 312 -------------T~~-g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~ 374 (427)
T TIGR00508 312 -------------TFM-GNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMY 374 (427)
T ss_pred -------------CCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEEC
Confidence 111 1122233444455544333 3457777888888888876522111111 12334455443
Q ss_pred CCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 430 PSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
.. .....+.++|.++|... .+. + ..+|++. ....+++||+++++++.+...
T Consensus 375 ~~-----------------------~~~~~~~~~l~~~Gv~~-~~~---~-~~l~~~p-pl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 375 KP-----------------------VNVEELQKKFVEQGVWI-RPF---G-KLIYVMP-PYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred Cc-----------------------cCHHHHHHHHHHCCeEE-Eec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHh
Confidence 22 11246777888888643 322 2 3689887 345778899999999988764
No 347
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.28 E-value=4e-09 Score=107.35 Aligned_cols=278 Identities=14% Similarity=0.064 Sum_probs=154.7
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcC---
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVG--- 213 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G--- 213 (517)
++.+.++++.|++ ..+++++||+|+..|+..+|... | .+-+|..+..-|-...-+....+
T Consensus 70 ~la~~l~~~~~~~---------~v~~~~SGseA~e~Alklar~~~----g----r~~Ii~~~~syHG~t~~~ls~~~~~~ 132 (364)
T PRK04013 70 EMLEELSKWVNYE---------YVYMGNSGTEAVEAALKFARLYT----G----RKEIIAMTNAFHGRTMGALSATWKPK 132 (364)
T ss_pred HHHHHHHhhcCCC---------EEEEeCchHHHHHHHHHHHHHHh----C----CCEEEEECCccccCchhhccCCCCcc
Confidence 3445555655543 47899999999999999998752 1 12344444444543322322221
Q ss_pred ----CC--CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc-C---hhHHHHHHHHhCCeE
Q 010125 214 ----ID--VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD-P---LKPLCDVAKQFGIWV 283 (517)
Q Consensus 214 ----~g--~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id-p---l~eI~~i~~~~gi~l 283 (517)
.+ ...+..+|. -|++.+++.+.+.. .+|++.......|.+- | +++|.++|++||+.+
T Consensus 133 ~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~~------aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gill 199 (364)
T PRK04013 133 YREDFEPLVPGFKHIPF-------NDVEAAKEAITKET------AAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALL 199 (364)
T ss_pred cccCCCCCCCCcEEecC-------CCHHHHHHHhcCCc------EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEE
Confidence 10 012233332 16788888886433 3566665444445543 3 999999999999999
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCC
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKD 363 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 363 (517)
+.|+++.|+ -...-+....-++ ..|.+++ -|.++..+..|.++.+..- . .....
T Consensus 200 I~DEv~tG~-RtG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a~~~~~~~--~------~~~~~-------------- 253 (364)
T PRK04013 200 IADEVQSGL-RTGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSLTLTNFDV--E------RGKHG-------------- 253 (364)
T ss_pred EEechhhcC-CCCchhHHHhcCC-CCCEEEe--cccccCCceeEEEEecccc--c------CCCcC--------------
Confidence 999999865 3222111111133 5777776 7988766778888765431 0 00000
Q ss_pred ccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEecCCCcchhhhhhh
Q 010125 364 WQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC--HFAVVCFRVSPSPVLMDKLKTK 441 (517)
Q Consensus 364 ~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~--~~~~v~f~~~~~~~~~~~~~~~ 441 (517)
.|+ .+.+....+..++++.+-.+++.+.+++. +. .+.. +. +.+. ...++.+.+..+
T Consensus 254 ~T~-~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l~-~l~~-~~---v~~vRG~Gl~~gve~~~~---------- 311 (364)
T PRK04013 254 STF-GGNPLACKAVAVTLRILRRERLVEKAGEK------FI-EIKG-ER---VVTTRGRGLMIGIVLKKP---------- 311 (364)
T ss_pred CCC-CcCHHHHHHHHHHHHHHHhccHHHHHHHH------HH-Hhcc-Cc---ceeeeeCcEEEEEEeCCc----------
Confidence 011 12122223444455555555544443332 22 2222 21 1111 122333333221
Q ss_pred hhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 442 YVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
...+.+.+.++|.+. .. .|..++|+.. ....+++++++++++|.++..++.
T Consensus 312 ---------------~~~i~~~~~~~Gll~-~~---~g~~vlr~~P-pl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 312 ---------------VGKYVEELQNRGYLV-HT---AGQRVIRLLP-PLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred ---------------HHHHHHHHHhCCcEE-ee---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHHHHHh
Confidence 235667777888654 22 2446899987 457788999999999999987654
No 348
>PRK07036 hypothetical protein; Provisional
Probab=99.28 E-value=1.2e-08 Score=107.43 Aligned_cols=329 Identities=11% Similarity=0.065 Sum_probs=175.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
++.+.++.+.|.+++.-+- ....|+++||+|+..|+..||.....+ |..+ ...+|.....-|-...-+..+
T Consensus 94 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGseAve~AlklAr~~~~~~-g~t~-r~~Ii~~~~~YHG~t~~a~s~ 164 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDL-------NHVFLTTGGSTAVDSALRFVHYYFNVR-GRPA-KKHIITRGDAYHGSTYLTASL 164 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-ccEEEEEcCccCCccHhhhcc
Confidence 4455667777777653211 257999999999999999998653211 2110 123344444455433333333
Q ss_pred cCCCC---------CCEEEEecCCC--CCcccC--------HHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----
Q 010125 212 VGIDV---------KNFRAIKTTKS--SSYGLS--------PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---- 268 (517)
Q Consensus 212 ~G~g~---------~~v~~vp~d~~--~~~~~d--------~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---- 268 (517)
.|-.. ..+..+|.... ....+. .+.+++.+.. ..+..+.+|++.-.....|.+-|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~y 242 (466)
T PRK07036 165 TGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPGY 242 (466)
T ss_pred cCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHHH
Confidence 32210 12344443110 000111 2345555542 12234567777766666677766
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCcccccc-ccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCC--
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHF-IDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTN-- 344 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~-- 344 (517)
+++|.++|++||+.+++|..+.|+.....-+... .-|+ ..|.+++ .|.++..+ ++|+++++++ +.+.+...
T Consensus 243 l~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~~ 317 (466)
T PRK07036 243 HARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLTSGYQPLGAVIISER--LLDVISGPNA 317 (466)
T ss_pred HHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEE--ccccccCccccEEEEEcHH--HHHHHhcccC
Confidence 9999999999999999999997763322111100 1133 4787776 69887664 6888888644 22333211
Q ss_pred cc--ccCCccccccccccCCCccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 010125 345 PE--YLKNKATESMQVVDYKDWQITLSRRFRSLKL---WFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC 419 (517)
Q Consensus 345 ~~--yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~ 419 (517)
+. |.. ..+-...++.. .++++.+..+ +++++..++.++|.+.|+++....++...
T Consensus 318 ~~~~~~~-----------------~~T~~gnpl~~aaa~a~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~v 377 (466)
T PRK07036 318 KGNVFTH-----------------GFTYSGHPVACAAALKNIEIMERE---GLCEHVREVGPYFEERLASLRELPLVGDV 377 (466)
T ss_pred cCccccc-----------------CCCCCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhccCCCEEEE
Confidence 00 111 01111233333 3344444332 45667777888888887654222122111
Q ss_pred --CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHH
Q 010125 420 --HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHV 497 (517)
Q Consensus 420 --~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di 497 (517)
...++.+.+..... .... ...-......+.+.+.++|.+.. +. + ..+|++. ....+++||
T Consensus 378 rG~Gl~~~ve~~~~~~----------~~~~--~~~~~~~~~~~~~~~~~~Gvl~~-~~---~-~~~~l~P-pl~it~~~i 439 (466)
T PRK07036 378 RGDHLMACVECVADKG----------SKAL--LPEDIAIGQRIDRHCQERGLLVR-PL---E-HLCVLSP-PLIITRAQI 439 (466)
T ss_pred EeeceEEEEEEccCcc----------ccCC--CCchhHHHHHHHHHHHHCCcEEe-ec---C-CEEEEeC-CCcCCHHHH
Confidence 12234444432110 0000 00001345667778888897543 21 2 3578875 345688899
Q ss_pred HHHHHHHHHHHHHHHhh
Q 010125 498 VVAWTVVQQHLEAFQSA 514 (517)
Q Consensus 498 ~~l~~~l~~~~~~l~~~ 514 (517)
+++++++.++.+++.++
T Consensus 440 d~~~~~l~~al~~~~~~ 456 (466)
T PRK07036 440 DEIVAILRAAIEETADE 456 (466)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999998888776543
No 349
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.28 E-value=3e-09 Score=110.81 Aligned_cols=323 Identities=12% Similarity=0.013 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHH---HHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCAL---QKA 208 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~---~ka 208 (517)
+..+.++.+.|.++++...+ ...|+++||+|+..|+..||... | ...+|.....-|-.. ..+
T Consensus 92 ~~~~~~la~~L~~~~~~~~~-------~v~f~~SGsEA~e~AiklAr~~t----g----r~~ii~~~~~yHG~td~~~~~ 156 (433)
T PRK00615 92 SEQEILFAEELFSYLGLEDH-------KIRFVSSGTEATMTAVRLARGIT----G----RSIIIKFLGCYHGHADTLLQG 156 (433)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh----C----CCEEEEEcCccCCCCcccCcc
Confidence 34556677788887753322 57999999999999999998752 1 122333343344321 111
Q ss_pred HHHcCCCCCCE-EEEecCCCCCc-----ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHH
Q 010125 209 AQIVGIDVKNF-RAIKTTKSSSY-----GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQ 278 (517)
Q Consensus 209 a~~~G~g~~~v-~~vp~d~~~~~-----~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~ 278 (517)
....+-..... ...+....... .-|+++|++.+.+.. ..+.+|++.......|.+-| +++|.++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~ 233 (433)
T PRK00615 157 ISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLG---HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRR 233 (433)
T ss_pred cccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcC---CceEEEEECCCCCCCCcccCCHHHHHHHHHHHHH
Confidence 11111100000 00000000000 127899999986432 23456777666666788766 4599999999
Q ss_pred hCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCcccccccc
Q 010125 279 FGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQV 358 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 358 (517)
||+.+++|.++.|+ ...........++ ..|.++ +.|.++..+.+|+++++++ +.+.+... .+....
T Consensus 234 ~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~--~gK~lggG~p~~av~~~~~--i~~~~~~~-~~~~~~------- 299 (433)
T PRK00615 234 TGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITV--YGKILGGGLPAAAVVAHKS--IMDHLAPE-GTIFQA------- 299 (433)
T ss_pred cCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEE--EcccccCCcceeeeeecHH--HHhhhcCC-CCcccC-------
Confidence 99999999999655 2221111111133 578766 5899976666888887644 22233211 111000
Q ss_pred ccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCeeEEEEEecCCCcch
Q 010125 359 VDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD---KRFEIVFPCHFAVVCFRVSPSPVLM 435 (517)
Q Consensus 359 ~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~l~~~~~~~~v~f~~~~~~~~~ 435 (517)
.+. .+.+....+..++++.+..+ +.+++..++.++|.+.|++. .++.+.......++.+.+.......
T Consensus 300 -----~T~-~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r~G~~~~i~~~~~~~~~ 370 (433)
T PRK00615 300 -----GTL-SGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEEMIRSQGFPVSLVRYGSMFSFFFNENRPNN 370 (433)
T ss_pred -----CCC-cccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeeceEEEEEEeCCCCCC
Confidence 011 11112233444455555433 34556666677775555431 1232211112234444443221000
Q ss_pred hhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 436 DKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 436 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
..+ ......+...++...|.++|.. +.+..+.. . .+ +...+++|||++++++.++.+++.
T Consensus 371 ~~~----------~~~~~~~~~~~~~~~l~~~Gv~-~~~~~~~~-~----~l-s~~ht~~did~~~~a~~~~~~~~~ 430 (433)
T PRK00615 371 LAE----------AQLSDIEAFQTFYQSAFSKGVY-LSPSPFEA-S----FL-SSAHSMENLDYAQNVLIDSLEKVF 430 (433)
T ss_pred hHH----------HhhCCHHHHHHHHHHHHHCCee-ecCccccc-c----ce-ecCCCHHHHHHHHHHHHHHHHHHh
Confidence 000 0000123456788888899964 33322111 1 22 334478899999999999988764
No 350
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.27 E-value=9e-09 Score=107.56 Aligned_cols=310 Identities=13% Similarity=0.032 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+..+.++.+.|.+++.- . ....|+++||+|+..|+..||... | ...+|.....-|-...-+...
T Consensus 92 ~~~~~~la~~l~~~~p~-~-------~~v~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~~~ 155 (428)
T PRK12389 92 TELEIEFAKMLKEAIPS-L-------EKVRFVNSGTEAVMTTIRVARAYT----G----RTKIIKFAGCYHGHSDLVLVA 155 (428)
T ss_pred CHHHHHHHHHHHHhCCC-C-------cEEEEeCCHHHHHHHHHHHHHHhh----C----CCEEEEECCCcCCChHHHHHh
Confidence 34456677777776531 1 257999999999999999998762 1 223444444455433333333
Q ss_pred cCCCC----------------CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhH
Q 010125 212 VGIDV----------------KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKP 271 (517)
Q Consensus 212 ~G~g~----------------~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~e 271 (517)
.|-+. ..+..+|. -|+++|++.+++.. ..+.+|++.-.....|.+.| +++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~---~~vaavi~EPv~g~~G~~~p~~~yl~~ 225 (428)
T PRK12389 156 AGSGPSTLGTPDSAGVPKSIAQEVITVPF-------NDIEALKEALDKWG---DEVAAVLVEPIVGNFGIVEPKPGFLEA 225 (428)
T ss_pred cCCcccccCCCCCCCCCCcccCceEEcCC-------CCHHHHHHHHHhcC---CcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 33110 11222221 17899999886432 23456676666666788888 999
Q ss_pred HHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCC-ccccCC
Q 010125 272 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTN-PEYLKN 350 (517)
Q Consensus 272 I~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~-~~yl~~ 350 (517)
|.++|++||+.+++|.++.|+ -.........-|+ ..|.+++ -|.++..+..|.++.+++ +.+.+... +.+...
T Consensus 226 l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~av~~~~~--i~~~~~~~~~~~~~~ 299 (428)
T PRK12389 226 VNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGAYGGRKD--IMEQVAPLGPAYQAG 299 (428)
T ss_pred HHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeeee--chhhcCCCceeEEeEHHH--HHhhhccCCCccccc
Confidence 999999999999999999876 2211111111233 5787654 799877677888877533 22333211 111110
Q ss_pred ccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCCCeeEEE
Q 010125 351 KATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKR-FEIVFPCHFAVVC 425 (517)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~-~~l~~~~~~~~v~ 425 (517)
|+ .+.+.......++++.+..+ +.+++..++.++|++.|++ .|. .++..-. +++.
T Consensus 300 --------------T~-~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~--g~~g 359 (428)
T PRK12389 300 --------------TM-AGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRLK--GALT 359 (428)
T ss_pred --------------CC-ccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC--cEEE
Confidence 11 11111223334455555333 3566677788888877765 332 1221111 2333
Q ss_pred EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 426 FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 426 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
+.+........ ......-......+.+.+.++|.+. .+. +...+.+ ....+++||+++++++.
T Consensus 360 i~~~~~~~~~~----------~~~~~~~~~~~~~~~~~l~~~Gv~~-~~~---~~~~~~~---~l~~t~e~id~~~~~l~ 422 (428)
T PRK12389 360 VYFTDEKVTNY----------DQAERSDGEAFGKFFKLMLNQGINL-APS---KYEAWFL---TTAHTEEDIEETLEAVD 422 (428)
T ss_pred EEEeCCCCCCh----------hhhcccCHHHHHHHHHHHHHCCcEe-ecC---CCCCeee---cCCCCHHHHHHHHHHHH
Confidence 33321100000 0000000123467777888888654 332 1112333 34568889999999999
Q ss_pred HHHHH
Q 010125 506 QHLEA 510 (517)
Q Consensus 506 ~~~~~ 510 (517)
++.++
T Consensus 423 ~~l~~ 427 (428)
T PRK12389 423 RAFAQ 427 (428)
T ss_pred HHHHh
Confidence 88754
No 351
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.26 E-value=7.6e-10 Score=107.77 Aligned_cols=304 Identities=12% Similarity=0.073 Sum_probs=187.3
Q ss_pred HHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCE
Q 010125 140 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNF 219 (517)
Q Consensus 140 ~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v 219 (517)
+.+++.+|.+++ ++.+-|-.++..++-+... .+++|++.+..++.+.++.++..- .+
T Consensus 146 ~~iakF~G~E~a---------ivYs~gF~ti~S~ipafsK-----------rGDIi~~de~~nfaIq~GlqlSRS---~i 202 (467)
T KOG1358|consen 146 KRIAKFMGTEDA---------IVYSYGFSTIESAIPAFSK-----------RGDIIFVDEAVNFAIQKGLQLSRS---TI 202 (467)
T ss_pred HHHHHhhCCcce---------eeeccccchhhhcchhhhc-----------cCcEEEEehhhhHHHHHHHhhhhh---ee
Confidence 557788888754 4454443334333333221 567899999999999999887765 67
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHhH----hcCC---cceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccc
Q 010125 220 RAIKTTKSSSYGLSPDSLMAQINSDV----EVGL---IPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 220 ~~vp~d~~~~~~~d~~~Le~~i~~~~----~~g~---~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~ 292 (517)
+.... .|++.||+.+.+.+ ++-+ .-.+||+..-.-++|.+-|+.+|.++..||...+++|..|..+
T Consensus 203 ~~Fkh-------ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG 275 (467)
T KOG1358|consen 203 SYFKH-------NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFG 275 (467)
T ss_pred EEecC-------CCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccc
Confidence 77653 47888888775544 1111 1246777777889999999999999999999999999999777
Q ss_pred cccCc--ccc-ccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCC
Q 010125 293 ACICP--EFR-HFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLS 369 (517)
Q Consensus 293 ~~~~~--~~~-~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 369 (517)
.+..- ... +.--.+...|.++.+.--.+.. +.|+...+.--...+.++ ..+|. .|
T Consensus 276 ~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas--~GgFc~G~~~i~~hQrLS-g~~Y~-------------------fS 333 (467)
T KOG1358|consen 276 VLGKTGRGVTEHFGVPITDIDIVTASMETALAS--GGGFCAGKSFIADHQRLS-GSGYC-------------------FS 333 (467)
T ss_pred cccccCccccccCCCCccceeeeeecccccccc--cCceeecceeeEeeeecc-cccee-------------------ee
Confidence 65331 111 1112366889999887655532 233332211100011111 11222 22
Q ss_pred CCCCchHHHHHHHHhc-HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccc
Q 010125 370 RRFRSLKLWFVIRNYG-VANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLS 448 (517)
Q Consensus 370 r~~~al~~~~~l~~~g-~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~ 448 (517)
+..-++-+-++.+.+. .+.-.++++........+...++...++++...+.++++-..+.+.. .
T Consensus 334 AslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~---------------~ 398 (467)
T KOG1358|consen 334 ASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSY---------------G 398 (467)
T ss_pred ccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeecccc---------------c
Confidence 2222222222222221 22233466677777788888888877899998899999888886641 1
Q ss_pred hHHHHHHHHHHHHHHHHhcCcEEEeeeeEC------CEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Q 010125 449 EEEQINEFNRELLESINASGKAYMTHAVLG------GIYAIRFATGATLTEKRHVVVAWTVVQQHLEAF 511 (517)
Q Consensus 449 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~------g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l 511 (517)
+.++-..+-+++.++...++........+. -+..+|+|+ +...++++++++.+.|++.+..+
T Consensus 399 s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~-~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 399 SREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICV-SAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred chHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEE-eCCCCHHHHHHHHHHHHHHHHhh
Confidence 222223444566666555565443322221 134699998 56778889999999999987654
No 352
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.26 E-value=1.1e-08 Score=106.62 Aligned_cols=312 Identities=11% Similarity=0.031 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
++.+.++.+.|+++...... ...+|+++||+|+..|+..||... | ...+|.....-|-...-+..+
T Consensus 82 ~~~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~~~~s~ 147 (421)
T PRK09792 82 YESYVTLAEKINALAPVSGQ------AKTAFFTTGAEAVENAVKIARAHT----G----RPGVIAFSGGFHGRTYMTMAL 147 (421)
T ss_pred CHHHHHHHHHHHHhCCCCCC------ceEEEeCChHHHHHHHHHHHHHhc----C----CCeEEEECCCcCCccHHHHhh
Confidence 34445666777776542211 157889999999999999998641 1 122344444455333223232
Q ss_pred cCC--------C--CCCEEEEecCCCCCccc----CHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc-C---hhHHH
Q 010125 212 VGI--------D--VKNFRAIKTTKSSSYGL----SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD-P---LKPLC 273 (517)
Q Consensus 212 ~G~--------g--~~~v~~vp~d~~~~~~~----d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id-p---l~eI~ 273 (517)
.|. + ...++.+|...+.. .+ +++.+++.+++.. ....+.+|++.-...+.|.+- | +++|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~ 225 (421)
T PRK09792 148 TGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAIR 225 (421)
T ss_pred cCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHHH
Confidence 221 1 01244455422111 12 3477777776421 112355677776677777653 5 99999
Q ss_pred HHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccc
Q 010125 274 DVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKAT 353 (517)
Q Consensus 274 ~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~ 353 (517)
++|++||+++++|..+.++.....-+....-++ ..|. .++.|.++..+..|+++.+++ +.+.+... ..
T Consensus 226 ~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi--~t~gK~l~~G~pigav~~~~~--i~~~~~~~--~~----- 293 (421)
T PRK09792 226 RLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDL--MTMAKSLAGGMPLSGVVGNAN--IMDAPAPG--GL----- 293 (421)
T ss_pred HHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcE--EEeehhhcCCCceEEEEEcHH--HHhccCCC--Cc-----
Confidence 999999999999999987643221111000112 5675 455899987788899887543 22222110 00
Q ss_pred cccccccCCCccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCC--eeEE
Q 010125 354 ESMQVVDYKDWQITLSRRFRSLKLW---FVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCH--FAVV 424 (517)
Q Consensus 354 ~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~--~~~v 424 (517)
..+....++... ++++.+..+ +.+++..++.+++.+.|++ .|.+ ..+. ..++
T Consensus 294 -------------~~T~~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v---~~vrG~Gl~~ 354 (421)
T PRK09792 294 -------------GGTYAGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAI---AAVRGLGSMI 354 (421)
T ss_pred -------------CCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCc---ceecccceEE
Confidence 011112333333 455555333 3555666667777666654 3322 2222 2344
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.+.+..... ... . ......+.+.+.++|.+.. ... ....++|+.. ....++++|++++++|
T Consensus 355 ~ie~~~~~~-------------~~~--~-~~~~~~l~~~~~~~Gv~i~-~~g-~~~~~irl~P-~l~i~~~ei~~~~~~l 415 (421)
T PRK09792 355 AAEFNDPQT-------------GEP--S-AAIAQKIQQRALAQGLLLL-TCG-AYGNVIRFLY-PLTIPDAQFDAAMKIL 415 (421)
T ss_pred EEEecCCcc-------------CCc--c-hHHHHHHHHHHHHCCcEEe-ecC-CCCCEEEEeC-CCcCCHHHHHHHHHHH
Confidence 455432200 000 0 1235678888888997642 211 1136899987 3457888999999999
Q ss_pred HHHHH
Q 010125 505 QQHLE 509 (517)
Q Consensus 505 ~~~~~ 509 (517)
.++..
T Consensus 416 ~~~l~ 420 (421)
T PRK09792 416 QDALS 420 (421)
T ss_pred HHHHh
Confidence 88753
No 353
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.26 E-value=2.2e-08 Score=105.11 Aligned_cols=323 Identities=11% Similarity=0.074 Sum_probs=175.3
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
....++.+.|+++++-.-. ..+|+++||+|+..|+..||.....+ +..+ ...+|......|-...-+..+.
T Consensus 97 ~~~~~lAe~L~~~~p~~~~-------~v~f~~sGseAve~AlKlA~~~~~~r-g~~~-r~~Ii~~~~~yHG~t~gals~~ 167 (453)
T PRK06943 97 EPAIELAERLAALTGGTLG-------HAFFASDGASAVEIALKMSFHAWRNR-GRGD-KREFVCLANGYHGETIGALGVT 167 (453)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCCHHHHHHHHHHHHHHHHHh-CCCC-CCEEEEECCCcCCCcHHhhccc
Confidence 3445667777777643211 57999999999999999998754222 2111 2234444444554332233322
Q ss_pred CCC---------CCCEEEEecCCCCCc----------ccCHHHHHHHHHHhHhcCCcceEEEeec-cCCccccccC----
Q 010125 213 GID---------VKNFRAIKTTKSSSY----------GLSPDSLMAQINSDVEVGLIPLFLCATI-GTTAITAVDP---- 268 (517)
Q Consensus 213 G~g---------~~~v~~vp~d~~~~~----------~~d~~~Le~~i~~~~~~g~~p~~vv~t~-gtt~~G~idp---- 268 (517)
|-. ...+..+|....... .-++++|++.+... +..+.+|++.- .....|.+-|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAviiEPvvqg~gG~~~~~~~y 244 (453)
T PRK06943 168 DVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAER---AGKIAALIVEPLVQCAAGMAMHDPSY 244 (453)
T ss_pred CChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEeccccccCCcccCCHHH
Confidence 210 012334443210000 01346777777532 23455666654 2444565532
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
++++.++|++||+.+++|..+.|+.....-+....-|+ ..|.+++ -|.++..+ +.|+++++++ +.+.+.....
T Consensus 245 l~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~--gKgl~gG~~Pi~av~~~~e--i~~~~~~~~~- 318 (453)
T PRK06943 245 LRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCL--SKGISGGYLPLSLVLSRDA--IFAAFYDDDV- 318 (453)
T ss_pred HHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEee--ehhhccCcccceEEEEcHH--HHHhhcccCc-
Confidence 89999999999999999999877643322111111234 5888887 68887664 6888888654 2223321100
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHH---HHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCe
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLW---FVIRNYGVANLRHFLRSHVNMAKLFERLVSGD---KRFEIVFPCHF 421 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~---~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~---~~~~l~~~~~~ 421 (517)
.. .+....+....++... ++++.+-.+ +.+++..++.++|.+.|+++ +.+.-+ .-..
T Consensus 319 -~~------------~~~~~~T~~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~G 381 (453)
T PRK06943 319 -TR------------GFLHSHSYTGNPLACRAALATLDLFAED---DVLARNARKSARLRAALAPLAAHPQVRHL-RQRG 381 (453)
T ss_pred -cC------------CccCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccc
Confidence 00 0000111112333333 344444333 35566667777777777653 332211 1112
Q ss_pred eEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHH
Q 010125 422 AVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAW 501 (517)
Q Consensus 422 ~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~ 501 (517)
.++.+.+..... . ......++.+.+.++|.+.. +. + ..+|++. ....+++||++++
T Consensus 382 l~~gvel~~~~~---------------~---~~~~~~~i~~~~~~~Gll~~-~~---g-~~l~~~P-pl~it~~eid~~~ 437 (453)
T PRK06943 382 TIFAFDVALDGD---------------A---ARTFSRRFFEAALERELLLR-PI---G-TTVYLMP-PYVLDDDEIAWLA 437 (453)
T ss_pred cEEEEEEccCCC---------------c---chHHHHHHHHHHHHCCcEEE-ec---C-CEEEEeC-CCcCCHHHHHHHH
Confidence 233344431100 0 02335677888888897542 21 2 3589986 4567888999999
Q ss_pred HHHHHHHHHHHhh
Q 010125 502 TVVQQHLEAFQSA 514 (517)
Q Consensus 502 ~~l~~~~~~l~~~ 514 (517)
++|.+..+++..|
T Consensus 438 ~~l~~al~~~~~~ 450 (453)
T PRK06943 438 ERTRATLDATLAE 450 (453)
T ss_pred HHHHHHHHHHHHh
Confidence 9999998887554
No 354
>PRK07483 hypothetical protein; Provisional
Probab=99.24 E-value=3.8e-08 Score=103.05 Aligned_cols=336 Identities=14% Similarity=0.077 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCe-EEEeCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKL-IVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~-~v~~s~~~H~s~~kaa~ 210 (517)
+....++.+.|.+++.-.. ....|+++||+|+..|+..||.....+ |.. .+. +|.....-|-...-+..
T Consensus 72 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGsEAve~AlklAr~~~~~~-g~~--~r~~Ii~~~~~YHG~t~~a~s 141 (443)
T PRK07483 72 TEPAEALADRLVAAAPAGL-------EHVYFVSGGSEAVEAALKLARQYFVEI-GQP--QRRHFIARRQSYHGNTLGALA 141 (443)
T ss_pred CHHHHHHHHHHHHhCCCCC-------CEEEEcCCcHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEECCCcCCcCHHHhh
Confidence 3444566677777653111 157999999999999999998753221 211 233 33344445533332333
Q ss_pred HcCC---------CCCCEEEEecCCCCCccc-------------CHHHHHHHHHHhHhcCCcceEEEeeccCC-cccccc
Q 010125 211 IVGI---------DVKNFRAIKTTKSSSYGL-------------SPDSLMAQINSDVEVGLIPLFLCATIGTT-AITAVD 267 (517)
Q Consensus 211 ~~G~---------g~~~v~~vp~d~~~~~~~-------------d~~~Le~~i~~~~~~g~~p~~vv~t~gtt-~~G~id 267 (517)
+.|- +...+..+|... .++- .+++|++++... ....+.+|++.-... ..|.+-
T Consensus 142 ~s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~ 217 (443)
T PRK07483 142 IGGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVP 217 (443)
T ss_pred hcCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEe
Confidence 2221 111233443211 0111 135666656421 112334555544332 236554
Q ss_pred C----hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhc
Q 010125 268 P----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLS 342 (517)
Q Consensus 268 p----l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~ 342 (517)
| +++|.++|++||+.+++|..+.|+.....-+....-++ ..|.+++ -|.++..+ +.|+++++++- .+.+.
T Consensus 218 ~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~i--~~~~~ 292 (443)
T PRK07483 218 PVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTI--AKGLGAGYQPIGAVLASDRI--YDAIA 292 (443)
T ss_pred CCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeee--hhhhccCccccEEEEEcHHH--HHHHh
Confidence 4 89999999999999999999877643221111111133 5788887 68887765 78888886542 22332
Q ss_pred CCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcC-CCeEEecCC--
Q 010125 343 TNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGD-KRFEIVFPC-- 419 (517)
Q Consensus 343 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~-~~~~l~~~~-- 419 (517)
.....+... .|+ .+.+.......++++.+-.+ +.+++..++.++|.+.|+++ ....++...
T Consensus 293 ~~~~~~~h~------------~T~-~gnpl~~aaa~a~l~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG 356 (443)
T PRK07483 293 DGSGFFQHG------------HTY-LGHATACAAALAVQRVIAED---GLLANVRARGEQLRARLRERLGQHPHVGDIRG 356 (443)
T ss_pred cCCCccccC------------CCC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEee
Confidence 111111110 011 11111222333344444333 35566666777777777542 112112111
Q ss_pred CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEee-eeECC--EeEEEEEecCCCCcHHH
Q 010125 420 HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTH-AVLGG--IYAIRFATGATLTEKRH 496 (517)
Q Consensus 420 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~-~~~~g--~~~lR~~~~~~~t~~~d 496 (517)
...++.+.+..... .....+. .......+.+.+.++|.++... ....+ ..++|++. ....+++|
T Consensus 357 ~Glm~gie~~~~~~----------~~~~~~~--~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~P-pL~it~~e 423 (443)
T PRK07483 357 RGLFVGVELVADRA----------TKAPFDP--ALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAP-PFIITAAQ 423 (443)
T ss_pred cccEEEEEEeeccc----------ccCCCCc--hhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEEC-CCCCCHHH
Confidence 12233343322100 0000000 0133466778888899765322 11111 25799987 46778999
Q ss_pred HHHHHHHHHHHHHHHHhhc
Q 010125 497 VVVAWTVVQQHLEAFQSAF 515 (517)
Q Consensus 497 i~~l~~~l~~~~~~l~~~~ 515 (517)
||+++++|.++..++.+..
T Consensus 424 id~~~~~l~~~l~~~~~~~ 442 (443)
T PRK07483 424 IDEIVERLGDAIDAALAAA 442 (443)
T ss_pred HHHHHHHHHHHHHHHHhhc
Confidence 9999999999998877543
No 355
>PRK06917 hypothetical protein; Provisional
Probab=99.23 E-value=5.4e-08 Score=102.09 Aligned_cols=338 Identities=12% Similarity=0.028 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEE-eCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVY-GSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~-~s~~~H~s~~kaa~ 210 (517)
++.+.++.+.|.+++.-..+ ..+|+++||+|+..|+..||.....+ +.. ++..|+ ....-|-...-+..
T Consensus 73 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~r-g~t--~r~~ii~~~~~yHG~t~~als 142 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDLN-------WSFFVNSGSEANETAMKIAIQHFQER-GIQ--GKHKILSRWMSYHGITMGALS 142 (447)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCChHHHHHHHHHHHHHHHHhc-CCC--CCCEEEEECCCcCCccHHHHH
Confidence 45566777888887642212 57899999999999999998754221 211 233343 44344533333333
Q ss_pred HcCCCC---------CCEEEEecCCCCCc----------ccCHHHHHHHHHHhHhcCCcceEEEeeccCCc-cccccC--
Q 010125 211 IVGIDV---------KNFRAIKTTKSSSY----------GLSPDSLMAQINSDVEVGLIPLFLCATIGTTA-ITAVDP-- 268 (517)
Q Consensus 211 ~~G~g~---------~~v~~vp~d~~~~~----------~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~-~G~idp-- 268 (517)
+.|... ..+..+|....... .-+.+.|++.++... ...+.+|++.-.... -|.+-|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p~~ 220 (447)
T PRK06917 143 MSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVPPK 220 (447)
T ss_pred hcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecCCH
Confidence 333210 11233331100000 013456677765321 123455666543332 234432
Q ss_pred --hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCc
Q 010125 269 --LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNP 345 (517)
Q Consensus 269 --l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~ 345 (517)
+++|.++|++||+.+++|.++.|+.....-+....-++ ..|.+++ .|.++..+ +.|+++++++ +.+.+....
T Consensus 221 ~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~--i~~~~~~~~ 295 (447)
T PRK06917 221 GYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR--VMEPILRGS 295 (447)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH--HHHHHhccC
Confidence 89999999999999999999977533222111111233 4787665 79998765 6788887643 223332211
Q ss_pred cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--Cee
Q 010125 346 EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFA 422 (517)
Q Consensus 346 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~ 422 (517)
..+... .|+ .+.+.......++++.+..+ +.+++..++.++|.+.|+++. ...++... ...
T Consensus 296 ~~~~~~------------~T~-~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl 359 (447)
T PRK06917 296 RSIMSG------------HTL-SANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGL 359 (447)
T ss_pred cccccc------------cCC-CCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecce
Confidence 111110 010 11112223344445544333 355666777777777776531 12122111 122
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeee-e--ECCEeEEEEEecCCCCcHHHHHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHA-V--LGGIYAIRFATGATLTEKRHVVV 499 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~--~~g~~~lR~~~~~~~t~~~di~~ 499 (517)
++.+.+..... ... ...........+.+.+.++|.+..... . -.+...+|++. ....+++||++
T Consensus 360 ~~~ie~~~~~~----------~~~--~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~P-pl~it~~eid~ 426 (447)
T PRK06917 360 LIGVEFVADKK----------TKQ--PFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAP-PMTITYSELDE 426 (447)
T ss_pred EEEEEEeccCC----------cCC--CCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEEC-CCcCCHHHHHH
Confidence 34444432100 000 000001345678888888997643211 0 11235789886 45678889999
Q ss_pred HHHHHHHHHHHHHhhc
Q 010125 500 AWTVVQQHLEAFQSAF 515 (517)
Q Consensus 500 l~~~l~~~~~~l~~~~ 515 (517)
+++++.++.+++..+-
T Consensus 427 ~~~~l~~~l~~~~~~~ 442 (447)
T PRK06917 427 LLSIFAKSVEEMMQKG 442 (447)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999998876553
No 356
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.23 E-value=1.5e-08 Score=105.46 Aligned_cols=315 Identities=10% Similarity=-0.015 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
.+...++.+.|.++++-+- ....|+++||+|+..|+..||.....+ |. + ..-+|.....-|-...-+..+
T Consensus 85 ~~~~~~la~~L~~~~p~~~-------~~v~f~~SGsEAve~AlklAr~~~~~~-g~-~-r~kii~~~~~yHG~t~~a~s~ 154 (428)
T PRK07986 85 HPPAIELCRKLVAMTPQPL-------ECVFLADSGSVAVEVAMKMALQYWQAK-GE-P-RQRFLTLRHGYHGDTFGAMSV 154 (428)
T ss_pred CHHHHHHHHHHHhhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CC-C-CcEEEEECCCcCCCcHhhhcc
Confidence 3445566777877764221 157999999999999999998753211 11 1 222444554455433222222
Q ss_pred cCCC----------CCCEEEEecCCCC---Cc-ccCHHHHHHHHHHhHhcCCcceEEEeecc-CCccccc----cChhHH
Q 010125 212 VGID----------VKNFRAIKTTKSS---SY-GLSPDSLMAQINSDVEVGLIPLFLCATIG-TTAITAV----DPLKPL 272 (517)
Q Consensus 212 ~G~g----------~~~v~~vp~d~~~---~~-~~d~~~Le~~i~~~~~~g~~p~~vv~t~g-tt~~G~i----dpl~eI 272 (517)
.|-. ...+..+|..... .+ .-|++++++.++.. +....+|++... ....|.+ +.+++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l 231 (428)
T PRK07986 155 CDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRV 231 (428)
T ss_pred cCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHH
Confidence 2210 0123344331100 01 13667888888632 222335555432 3334443 349999
Q ss_pred HHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCCc-cccCC
Q 010125 273 CDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTNP-EYLKN 350 (517)
Q Consensus 273 ~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~~-~yl~~ 350 (517)
.++|++||+++++|.++.|+.....-+.....++ ..|.++ +.|.++.. ..+|++++++. +.+.+.... ..+..
T Consensus 232 ~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t--~gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~ 306 (428)
T PRK07986 232 RKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILC--LGKALTGGTMTLSATLTTRE--VAETISNGEAGCFMH 306 (428)
T ss_pred HHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEE--echhhhCCcccCcchhchHH--HHHHhhcCCCCcccc
Confidence 9999999999999999966422211111111233 468776 57988766 36777776543 223332111 00000
Q ss_pred ccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEEEEEe
Q 010125 351 KATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC--HFAVVCFRV 428 (517)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~--~~~~v~f~~ 428 (517)
..++. +.+.......++++.+-.+ +..++..++.++|.+.|+++.....+... ...++.+.+
T Consensus 307 ------------~~T~~-g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~ 370 (428)
T PRK07986 307 ------------GPTFM-GNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVET 370 (428)
T ss_pred ------------CCCCC-cCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEe
Confidence 01111 2222333445555555433 34667777888888888764222112111 122334434
Q ss_pred cCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 429 SPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
..+ .....+.+.+.++|... .+. | .++|++. ....+++||++++++|.++.
T Consensus 371 ~~~-----------------------~~~~~~~~~l~~~Gl~~-~~~---g-~~i~~~P-pl~it~~ei~~~~~~l~~~l 421 (428)
T PRK07986 371 TRP-----------------------VNMAALQRFFVEQGVWI-RPF---G-KLIYLMP-PYIILPEQLQRLTAAVNRAV 421 (428)
T ss_pred CCc-----------------------ccHHHHHHHHHHCCcEE-Eec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHH
Confidence 321 01346777888889754 221 3 4799986 45778899999999998876
Q ss_pred H
Q 010125 509 E 509 (517)
Q Consensus 509 ~ 509 (517)
+
T Consensus 422 ~ 422 (428)
T PRK07986 422 Q 422 (428)
T ss_pred h
Confidence 4
No 357
>PRK07481 hypothetical protein; Provisional
Probab=99.23 E-value=2.2e-08 Score=105.18 Aligned_cols=336 Identities=12% Similarity=0.036 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+..+.++.+.|.++++-+ .. ....|+++||+|+..|+..||..... .|..+ ...+|.....-|-...-+..+
T Consensus 85 ~~~~~~lae~L~~~~~~~-~~-----~~v~f~~sGsEAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~ga~s~ 156 (449)
T PRK07481 85 HPRAIELSYELIDMFAPE-GM-----RRVFFSSGGSDSVETALKLARQYWKV-RGQPE-RTKFISLKQGYHGTHFGGASV 156 (449)
T ss_pred CHHHHHHHHHHHHhcCCC-CC-----CEEEEcCchHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCcCCcchhhhcc
Confidence 344556777788876421 11 25789999999999999999875321 12111 223444444455333222222
Q ss_pred cCCC---------CCCEEEEecCCCC--Ccc-cCHHHHHHHHHHh----H--hcCCcceEEEeeccCCccccccC----h
Q 010125 212 VGID---------VKNFRAIKTTKSS--SYG-LSPDSLMAQINSD----V--EVGLIPLFLCATIGTTAITAVDP----L 269 (517)
Q Consensus 212 ~G~g---------~~~v~~vp~d~~~--~~~-~d~~~Le~~i~~~----~--~~g~~p~~vv~t~gtt~~G~idp----l 269 (517)
.|-. ...+..+|....- .+. -|++.+++.+.+. . ..+..+.+|++.-.....|.+-| +
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl 236 (449)
T PRK07481 157 NGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFW 236 (449)
T ss_pred CCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHH
Confidence 2210 0123334321100 011 1444443332211 1 11234566777665555676654 8
Q ss_pred hHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCcccc
Q 010125 270 KPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPEYL 348 (517)
Q Consensus 270 ~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~yl 348 (517)
++|.++|++||+.+++|..+.|+.....-+....-++ ..|.+++ .|.++..+ +.|+++++++ +.+.+......
T Consensus 237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~--i~~~~~~~~~~- 310 (449)
T PRK07481 237 PLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCL--AKGITSGYVPLGATMVNAR--IADAFEANADF- 310 (449)
T ss_pred HHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEE--eecccCCCcCceEEEEcHH--HHHHHhccCcc-
Confidence 9999999999999999999877643221111111233 5788776 69887663 6888888654 22333211100
Q ss_pred CCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEEE
Q 010125 349 KNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFAVVC 425 (517)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~~v~ 425 (517)
.. .+...+...+.+....+..++++.+..+ +.+++..++.++|.+.|+++. .+.++... ...++.
T Consensus 311 -~~--------~~~h~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~g 378 (449)
T PRK07481 311 -GG--------AIMHGYTYSGHPVACAAALATLDIVVRE---DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLA 378 (449)
T ss_pred -cc--------ccccCCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEE
Confidence 00 0000000111122223334445544333 355666667777777776531 12222111 122334
Q ss_pred EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 426 FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 426 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
+.+..... .....+ ........+.+.+.++|.+.. +. | ..+|++. ....+++|||+++++|.
T Consensus 379 i~l~~~~~----------~~~~~~--~~~~~~~~~~~~~~~~Gvl~~-~~---g-~~i~l~P-pl~it~~eid~~~~~l~ 440 (449)
T PRK07481 379 LDLVADKA----------TREPID--PSKGYANAVADVARENGVLVR-PS---G-TKIILSP-PLVIQREDVDRIVDALD 440 (449)
T ss_pred EEeccccc----------ccCCCC--chhHHHHHHHHHHHhCCeEEE-ec---C-CEEEEEC-CCCCCHHHHHHHHHHHH
Confidence 44432100 000000 002345667778888896542 21 2 2478875 34568889999999999
Q ss_pred HHHHHH
Q 010125 506 QHLEAF 511 (517)
Q Consensus 506 ~~~~~l 511 (517)
++.+++
T Consensus 441 ~~l~~~ 446 (449)
T PRK07481 441 AGLSAV 446 (449)
T ss_pred HHHHhc
Confidence 988764
No 358
>PRK06149 hypothetical protein; Provisional
Probab=99.22 E-value=1.3e-08 Score=116.50 Aligned_cols=321 Identities=8% Similarity=-0.000 Sum_probs=175.4
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
....++.+.|++++.-+. ...+|+++||+||..|+..||... | .+.+|.+....|-...-+..+.
T Consensus 624 ~~~~elae~L~~~~p~~~-------~~v~f~~SGsEA~e~AlklAr~~t----g----r~~ii~~~~~yHG~t~ga~~~s 688 (972)
T PRK06149 624 AAVAEFSERLAALAPDGL-------DTVFLVNSGSEANDLAIRLAWAAS----G----RRDVVSVLEAYHGWTVATDAVS 688 (972)
T ss_pred HHHHHHHHHHHHhCCCCc-------CEEEEeCCchHHHHHHHHHHHHhc----C----CCeEEEEeCCCCCcChhHhhhc
Confidence 344555666777662111 157999999999999999998752 1 2334555545563222221111
Q ss_pred C----------CCCCCEEEEecCCC--CCcc-cC-----HHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hh
Q 010125 213 G----------IDVKNFRAIKTTKS--SSYG-LS-----PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LK 270 (517)
Q Consensus 213 G----------~g~~~v~~vp~d~~--~~~~-~d-----~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~ 270 (517)
+ .....+..++.... ..++ .+ .+++++.++...+.+..+.+|++.-.....|.+-| ++
T Consensus 689 ~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~ 768 (972)
T PRK06149 689 TSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQ 768 (972)
T ss_pred CCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHH
Confidence 1 00112344433210 0011 12 35666666554444455667777665556688877 99
Q ss_pred HHHHHHHHhCCeEEcccccccccccCccc-cccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccC
Q 010125 271 PLCDVAKQFGIWVHVDAAYAGSACICPEF-RHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLK 349 (517)
Q Consensus 271 eI~~i~~~~gi~lhvDaA~g~~~~~~~~~-~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~ 349 (517)
+|.++|++||+.+++|.++.|+......+ ..-..|+ ..|.+++ .|.++..+..|+++++++ +.+.+... .++.
T Consensus 769 ~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~--i~~~~~~~-~~~~ 842 (972)
T PRK06149 769 QVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE--IAEALEAE-GYFF 842 (972)
T ss_pred HHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH--HHhhhccC-Cccc
Confidence 99999999999999999996653322211 1001234 5788865 799987677899988654 22333221 1211
Q ss_pred CccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEEEE
Q 010125 350 NKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFAVVCF 426 (517)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~~v~f 426 (517)
. +. .+.+.......++++.+-.+ ++.++..++.++|++.|+++. ...++... ...++.+
T Consensus 843 s--------------T~-~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Gl~~gv 904 (972)
T PRK06149 843 S--------------ST-GGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAVHGMGLYLGV 904 (972)
T ss_pred C--------------CC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEEeecceEEEE
Confidence 1 11 12222223334445544333 345566667777777776531 11112111 1223344
Q ss_pred EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 427 RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
.+..... + ... .......+.+++.++|.+. .+.... ..++|+.. ....+++||+.++++|.+
T Consensus 905 el~~~~~----------~--~~~---~~~~~~~i~~~l~~~Gvl~-~~~g~~-~~vl~~~P-pl~it~~~id~~~~~l~~ 966 (972)
T PRK06149 905 ELVRDRQ----------T--LEP---ATEETAAICDRLLELGVIM-QPTGDH-LNILKIKP-PLCLDRESADFFVDMLDR 966 (972)
T ss_pred EEecCcc----------c--CCC---ChHHHHHHHHHHHhCCeEE-eecCCC-CCEEEEEC-CCcCCHHHHHHHHHHHHH
Confidence 4432100 0 000 0123567788888889654 332211 35789876 346788899999999998
Q ss_pred HHHH
Q 010125 507 HLEA 510 (517)
Q Consensus 507 ~~~~ 510 (517)
+..+
T Consensus 967 ~l~~ 970 (972)
T PRK06149 967 VLTE 970 (972)
T ss_pred HHHh
Confidence 8754
No 359
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.22 E-value=3.3e-08 Score=104.09 Aligned_cols=328 Identities=10% Similarity=0.022 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
++...++.+.|++++.-+. ....|+++||+||..|+..||.....+ |..+ ...+|.....-|-...-+..+
T Consensus 89 ~~~~~~lae~L~~~~p~~~-------~~v~f~~sGsEAve~AlKlAr~~~~~~-g~t~-r~~ii~~~~~yHG~t~ga~s~ 159 (466)
T PRK07030 89 HEPVIELSERLVKITPPGL-------SRCFYADNGSSAIEVALKMSFHYWRNR-GKPR-KKRFVTLTNSYHGETLAAMSV 159 (466)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCcccHHHHhc
Confidence 4455667777887763211 257999999999999999998753221 2111 223444554455443333333
Q ss_pred cCCCC---------CCEEEEecCCCC--Cc--------ccCHHHHHHHHHHhHhcCCcceEEEeec-cCCccccccC---
Q 010125 212 VGIDV---------KNFRAIKTTKSS--SY--------GLSPDSLMAQINSDVEVGLIPLFLCATI-GTTAITAVDP--- 268 (517)
Q Consensus 212 ~G~g~---------~~v~~vp~d~~~--~~--------~~d~~~Le~~i~~~~~~g~~p~~vv~t~-gtt~~G~idp--- 268 (517)
.|... ..+..+|..... .. .-+++.+++.+... +....+|++.- .....|.+-|
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~---~~~iAAvi~EP~iqg~gG~~~~~~~ 236 (466)
T PRK07030 160 GDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEH---HDEIAAVIVEPLIQGAGGMRMYHPV 236 (466)
T ss_pred cCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEecccccCCCcccCCHH
Confidence 33210 123344432100 00 11356677777532 23345666654 2344465533
Q ss_pred -hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCc-
Q 010125 269 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNP- 345 (517)
Q Consensus 269 -l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~- 345 (517)
+++|.++|++||+.+++|..+.|+.....-+....-++ ..|.+++ -|.++..+ ..|+++++++- .+.+....
T Consensus 237 yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~ei--~~~~~~~~~ 311 (466)
T PRK07030 237 YLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCL--SKALTGGYLPLAAVLTTDTV--YQAFYDDYP 311 (466)
T ss_pred HHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEee--ehhccCCcccceEEEecHHH--HHHHhcccc
Confidence 89999999999999999999877643322111111234 5888887 68887774 78888886542 22332110
Q ss_pred ---cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CC
Q 010125 346 ---EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP--CH 420 (517)
Q Consensus 346 ---~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~--~~ 420 (517)
.+.. ..|+ .+.........++++.+-.+ +.+++..++.++|.+.|+++.....+.. -.
T Consensus 312 ~~~~~~h-------------~~T~-~gnpla~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~ 374 (466)
T PRK07030 312 TLRAFLH-------------SHSY-TGNPLACAAALATLDIFEQD---NVIENNRALARRMAEATAHLADHPHVAEVRQT 374 (466)
T ss_pred ccccccc-------------CCCC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEeEec
Confidence 0110 0011 11112223334445544333 3556777788888888866422211211 11
Q ss_pred eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHH
Q 010125 421 FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVA 500 (517)
Q Consensus 421 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l 500 (517)
..++.+.+..... .+.+.. .. .....++.+++.++|.+. .+. + ..+|+.. ....+++||+.+
T Consensus 375 Gl~~gie~~~~~~----------~~~~~~-~~-~~~~~~i~~~~~~~Gvl~-~~~---g-~~i~~~P-pl~it~~eid~~ 436 (466)
T PRK07030 375 GMILAIEMVQDKA----------SKTPYP-WQ-ERRGLKVYQHALERGALL-RPL---G-SVVYFLP-PYVITPEQIDFL 436 (466)
T ss_pred eeEEEEEeccCcc----------ccccCc-ch-hHHHHHHHHHHHHCCeEE-Eec---C-CEEEEEC-CccCCHHHHHHH
Confidence 2234444432110 000000 00 123456778888889654 221 2 4689886 467788999999
Q ss_pred HHHHHHHHHHH
Q 010125 501 WTVVQQHLEAF 511 (517)
Q Consensus 501 ~~~l~~~~~~l 511 (517)
++.+.+..+++
T Consensus 437 ~~~l~~al~~~ 447 (466)
T PRK07030 437 AEVASEGIDIA 447 (466)
T ss_pred HHHHHHHHHHH
Confidence 99999998877
No 360
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.18 E-value=2.6e-08 Score=104.89 Aligned_cols=333 Identities=10% Similarity=0.010 Sum_probs=174.7
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+..+.++.+.|++++.-.. ...+|+++||+||..|+..||.....+ |..+ .+-+|.....-|-...-+..+
T Consensus 98 ~~~~~~lae~L~~~~p~~~-------~~v~f~~SGseAve~AlklAr~~~~~~-g~tg-r~~ii~~~~~YHG~t~~als~ 168 (460)
T PRK06916 98 NVPSILLAEKLIEVVPEGL-------KKVFYSDSGATAVEIAIKMAFQYWQNK-GKPK-KQRFVTLKNAYHGDTIGAVSV 168 (460)
T ss_pred CHHHHHHHHHHHHhCCCCC-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCcCCcccHHhHhc
Confidence 3445567777877763211 257999999999999999998753221 2111 223444554455444334443
Q ss_pred cCCC---------CCCEEEEecCCC-----C-C----cccCHHHHHHHHHHhHhcCCcceEEEeec-cCCccccccC---
Q 010125 212 VGID---------VKNFRAIKTTKS-----S-S----YGLSPDSLMAQINSDVEVGLIPLFLCATI-GTTAITAVDP--- 268 (517)
Q Consensus 212 ~G~g---------~~~v~~vp~d~~-----~-~----~~~d~~~Le~~i~~~~~~g~~p~~vv~t~-gtt~~G~idp--- 268 (517)
.|-. ...+..+|.... + + ..-+++.+++.++.. +..+.+|++.- .....|.+-|
T Consensus 169 s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~iAAvi~EP~iqg~gG~~~~~~~ 245 (460)
T PRK06916 169 GAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEK---HEEIAAIIVEPLVQGAGGMITMPKG 245 (460)
T ss_pred cCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhC---CCcEEEEEEeccccCCCCcccCCHH
Confidence 3321 012344443100 0 0 012456677777521 22345566654 2444465532
Q ss_pred -hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCcc
Q 010125 269 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNPE 346 (517)
Q Consensus 269 -l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~~ 346 (517)
+++|.++|++||+.+++|..+.|+.....-+....-++ ..|.+++ -|.++..+ +.|+++.+++- .+.+...
T Consensus 246 fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~ei--~~~~~~~-- 318 (460)
T PRK06916 246 YLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMTA--GKGLTGGYLPIAITVTTDEI--YNAFYGD-- 318 (460)
T ss_pred HHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeeee--ehhhhcCccccceeeecHHH--HHHhhcc--
Confidence 89999999999999999999877533221111111233 5788765 78887664 68888886542 2233211
Q ss_pred ccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CeeEE
Q 010125 347 YLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC--HFAVV 424 (517)
Q Consensus 347 yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~--~~~~v 424 (517)
+..... .....|+ .+.+.......++++.+..+ +.+++..++.++|.+.|+++....++... ...++
T Consensus 319 ~~~~~~-------~~~~~T~-~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~ 387 (460)
T PRK06916 319 YEEQKT-------FFHGHSY-TGNPLGCAVALANLELYEKT---NLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMV 387 (460)
T ss_pred ccccCc-------cccCCCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCcee
Confidence 100000 0000011 11111222333344444333 35567777888888888764222111111 11223
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.+.+..... .+... ... .....++...+.++|.+.. +. | ..+|+.. ....+++||++++++|
T Consensus 388 giel~~~~~----------~~~~~-~~~-~~~~~~i~~~~~~~Gvl~~-~~---g-~~l~~~P-pl~it~~~id~~~~~l 449 (460)
T PRK06916 388 GIELVKNKE----------TKEPF-EWT-ERVGVQVCKRSRELGMLTR-PL---G-NTIVFMP-PLASTIDELDEMLRIL 449 (460)
T ss_pred eEEeecccc----------cccCC-Cch-hhHHHHHHHHHHHCCeEEE-ec---C-CEEEEeC-CcccCHHHHHHHHHHH
Confidence 333322100 00000 000 1234567778888896542 21 2 4789886 4577889999999999
Q ss_pred HHHHHHHH
Q 010125 505 QQHLEAFQ 512 (517)
Q Consensus 505 ~~~~~~l~ 512 (517)
.+..+++.
T Consensus 450 ~~~l~~~~ 457 (460)
T PRK06916 450 YKAISDVT 457 (460)
T ss_pred HHHHHhhc
Confidence 99887653
No 361
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.16 E-value=1e-07 Score=100.45 Aligned_cols=331 Identities=10% Similarity=0.020 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHcCCCc---ccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH
Q 010125 133 ELENIVMDWLGQMLKLPK---SFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA 209 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~---~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa 209 (517)
....++.+.|.+++.-.. .. ....|+++||+||..|+..||.....+ |..+ ..-+|.....-|-...-+.
T Consensus 107 ~~~~~lae~L~~~~p~~~~~~~~-----~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~~~-r~~ii~~~~syHG~t~gal 179 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDGRAPL-----SKVFYADNGSAGVEVALKMAFHYFHNR-GEHR-RTRFIALENGYHGETIGAL 179 (472)
T ss_pred HHHHHHHHHHHHhCCCcccCCCC-----CEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCchhhh
Confidence 344566777777763210 11 257999999999999999999764322 2111 2234445444553333333
Q ss_pred HHcCCC---------CCCEEEEecCCCC--Cc--------ccCHHHHHHHHHHhHhcCCcceEEEeec-cCCccccccC-
Q 010125 210 QIVGID---------VKNFRAIKTTKSS--SY--------GLSPDSLMAQINSDVEVGLIPLFLCATI-GTTAITAVDP- 268 (517)
Q Consensus 210 ~~~G~g---------~~~v~~vp~d~~~--~~--------~~d~~~Le~~i~~~~~~g~~p~~vv~t~-gtt~~G~idp- 268 (517)
...|.. ...+..+|..... .. .-+++.+++.+... +..+.+|++.- .....|.+-|
T Consensus 180 s~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~iAAvI~EPviqg~gG~~~~p 256 (472)
T PRK08742 180 AVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQS---PGEICALILEPRLQCAGGMRMHH 256 (472)
T ss_pred hccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhC---CCceEEEEEccccccCCCcccCC
Confidence 332221 0123444432100 00 01356777777521 22345555554 2334465432
Q ss_pred ---hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCC
Q 010125 269 ---LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTN 344 (517)
Q Consensus 269 ---l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~ 344 (517)
++++.++|++||+.|++|..+.|+.....-+.....|+ ..|.+++ -|.++..+ +.|+++++++ +.+.+...
T Consensus 257 ~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~--gKgl~gG~~Plaav~~~~e--i~~~~~~~ 331 (472)
T PRK08742 257 PAYLRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCL--SKGLTGGFLPLSAVLATQQ--LYDAFLDD 331 (472)
T ss_pred HHHHHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEE--cccccCCCCCcceeeccHH--HHHHhhcc
Confidence 89999999999999999999877643222111111234 5888887 69887664 6788877644 22233211
Q ss_pred c--cccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--C
Q 010125 345 P--EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC--H 420 (517)
Q Consensus 345 ~--~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~--~ 420 (517)
. ..+. ...|+ .+.+....+..++++.+-.++ .+++..++.++|.+.++......++.+. .
T Consensus 332 ~~~~~~~------------h~~T~-~gnpl~~Aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~ 395 (472)
T PRK08742 332 SRERAFL------------HSHSY-TGNPLACAAALATLDIFADDD---VIARNQPTAARMTQLAAQIGEHPHVADVRQA 395 (472)
T ss_pred CccCccC------------cCCCC-CccHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeEecc
Confidence 0 0000 00011 111122233344455444443 3455555666666555433222122121 1
Q ss_pred eeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHH
Q 010125 421 FAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVA 500 (517)
Q Consensus 421 ~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l 500 (517)
..++.+.+..... . .............+.+.+.++|.+.. + .| .+||+.. ....+++||+++
T Consensus 396 Gl~~giel~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~Gll~~-~---~g-~vi~~~P-pL~it~~ei~~~ 457 (472)
T PRK08742 396 GMVVAFELTRGGN----------K--RTPFPPAARVGLHAYRAALARGVVLR-P---LG-DVLYWMP-PYCVDEAQLALL 457 (472)
T ss_pred ceEEEEEeccCcc----------c--cccCCchhHHHHHHHHHHHHCCeEEE-e---cC-CEEEEEC-CCCCCHHHHHHH
Confidence 2234444432100 0 00000001233567777888897542 2 13 4799987 567889999999
Q ss_pred HHHHHHHHHHHH
Q 010125 501 WTVVQQHLEAFQ 512 (517)
Q Consensus 501 ~~~l~~~~~~l~ 512 (517)
+++|.++.+++.
T Consensus 458 ~~~l~~~l~~~~ 469 (472)
T PRK08742 458 ADTTRHAIDEAV 469 (472)
T ss_pred HHHHHHHHHHHh
Confidence 999999988764
No 362
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.15 E-value=4.2e-08 Score=102.64 Aligned_cols=312 Identities=12% Similarity=0.065 Sum_probs=163.7
Q ss_pred hhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHH-hc-------c----------cCC
Q 010125 129 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK-IG-------R----------ENI 190 (517)
Q Consensus 129 p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~-~g-------~----------~~~ 190 (517)
+...++.+.+.+.+.+++. ... ...+|++||||||..|+..||.....+ .+ . .+.
T Consensus 101 ~~~~~la~~l~~~l~~~~p--~~~-----~~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~ 173 (464)
T TIGR00699 101 FPSKDWAKILKEGILKVAP--KGQ-----DQVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGS 173 (464)
T ss_pred HHHHHHHHHHHHhHHhhCC--CCc-----CEEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCC
Confidence 3344455554444455542 111 257999999999999999998753211 01 0 011
Q ss_pred CC-eEEEeCCCCchHHHHHHHHcCCC--------CCCEEEEecCCC-CC-----------cccCHHHHHHHHHHhHhcCC
Q 010125 191 SK-LIVYGSDQTHCALQKAAQIVGID--------VKNFRAIKTTKS-SS-----------YGLSPDSLMAQINSDVEVGL 249 (517)
Q Consensus 191 ~~-~~v~~s~~~H~s~~kaa~~~G~g--------~~~v~~vp~d~~-~~-----------~~~d~~~Le~~i~~~~~~g~ 249 (517)
++ .+|.....-|-...-+..+.|-. ...+..+|.... .. ..-+++.|++++++. +.
T Consensus 174 ~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~---~~ 250 (464)
T TIGR00699 174 PDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKW---HK 250 (464)
T ss_pred cCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhc---CC
Confidence 12 34445545564444444443321 011222332100 00 001456677777532 22
Q ss_pred cceEEEeeccCCccccccC----hhHHHHHHHHhCCeEEcccccccccccCccccccccCCC-CCCeeeeccccccCCCC
Q 010125 250 IPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE-GADSFSLNAHKWFFATL 324 (517)
Q Consensus 250 ~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~-~aDsi~~~~hK~l~~p~ 324 (517)
.+.+|++.-.....|.+-| +++|.++|++||+.|++|.++.|+.....-+..-..|+. ..|.+++ .|.++.
T Consensus 251 ~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg~-- 326 (464)
T TIGR00699 251 PVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQT-- 326 (464)
T ss_pred cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhhcc--
Confidence 3556777666666688877 999999999999999999999766432211111112443 5888766 687742
Q ss_pred cceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHH
Q 010125 325 DCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLF 403 (517)
Q Consensus 325 ~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l 403 (517)
.|+++.+ . .+.. .+.+..+ |+ .+.........++++.+-.++ ..++..++.++|
T Consensus 327 -gG~~~~~-~-----~~~~~~~~~~~~--------------T~-~gnp~~~aaa~a~L~~l~~~~---l~~~~~~~g~~l 381 (464)
T TIGR00699 327 -AGYFFHD-P-----AFRPNKPYRQFN--------------TW-MGDPSRALILREIIQEIKRKD---LLENVAHVGDYL 381 (464)
T ss_pred -CCccccc-h-----hccCCCCccccc--------------CC-CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHH
Confidence 2333222 1 1110 0001100 00 111112223333445443333 445555566666
Q ss_pred HHHHhc----CCC-eEEec-CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE
Q 010125 404 ERLVSG----DKR-FEIVF-PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL 477 (517)
Q Consensus 404 ~~~l~~----~~~-~~l~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~ 477 (517)
.+.|++ .|. +.-+- .....++.+.+.. ......+.+.+.++|.+. ..
T Consensus 382 ~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~-----------------------~~~~~~i~~~~~~~Gvl~-~~--- 434 (464)
T TIGR00699 382 YTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD-----------------------EAKRDKLLKKARNNGVNI-GG--- 434 (464)
T ss_pred HHHHHHHHHhCCCceeeecccCeEEEEEEecCC-----------------------HHHHHHHHHHHHHCCcEE-ec---
Confidence 666654 332 21111 1334455555421 123467888888889754 22
Q ss_pred CCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 478 GGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 478 ~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
.|...+|++. ....+++||+.++++|.++
T Consensus 435 ~g~~~ir~~P-pl~it~~eid~~~~~l~~~ 463 (464)
T TIGR00699 435 CGVKAIRLRP-MLVFQKHHADIFLEIISKI 463 (464)
T ss_pred CCCCeEEEeC-CCCCCHHHHHHHHHHHHHh
Confidence 2446899997 4678888999999998875
No 363
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.14 E-value=1.2e-07 Score=99.73 Aligned_cols=331 Identities=11% Similarity=0.018 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEc-CCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQ-GTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t-~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
..+.++.+.|.+++.-+-.. ....+|+ ++||+|+..|+..||... | ...+|.+...-|-...-+..+
T Consensus 106 ~~~~~la~~L~~~~p~~~~~----~~~v~f~~~SGSEAve~AlklAr~~t----g----r~~ii~~~~~yHG~t~~als~ 173 (464)
T PRK06938 106 PVKDQFVQDLFASLPEAFAR----EAKIQFCGPTGTDAVEAALKLVKTAT----G----RSTVLSFQGGYHGMSQGALSL 173 (464)
T ss_pred HHHHHHHHHHHHhCcccccc----cceEEEeCCCcHHHHHHHHHHHHHhh----C----CCeEEEECCccCCccHHHHhh
Confidence 34445556666654311000 0124454 699999999999998652 1 223444444455433333333
Q ss_pred cCC-------C--CCCEEEEecCCCCCc----------ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----
Q 010125 212 VGI-------D--VKNFRAIKTTKSSSY----------GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---- 268 (517)
Q Consensus 212 ~G~-------g--~~~v~~vp~d~~~~~----------~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---- 268 (517)
.|- + ...+..+|....... ..+.+.+++.+.+.......+.+|++.-.....|.+-|
T Consensus 174 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~y 253 (464)
T PRK06938 174 MGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEW 253 (464)
T ss_pred cCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHH
Confidence 221 0 113455554211000 12467788888642211123456666654444466533
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCcccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYL 348 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl 348 (517)
++++.++|++||+.+++|..+.|+.....-+....-|+ ..|.+++ -|.++..++.|+++.++. + +.+. +...
T Consensus 254 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~--gKglggG~PlsAv~~~~~--~-~~~~--~~~~ 325 (464)
T PRK06938 254 LRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVVL--SKAIGGSLPLAVVVYREW--L-DTWQ--PGAH 325 (464)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEEe--eccccCCCceEEEeehhH--h-hccC--CCCC
Confidence 89999999999999999999877643221111111233 5788887 688877788999988654 2 2221 1111
Q ss_pred CCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEEE
Q 010125 349 KNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFAVVC 425 (517)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~~v~ 425 (517)
. .|+ .+.+.......++++.+..+ +.+++..++.++|.+.|+++. ...++... ...++.
T Consensus 326 ~--------------~T~-~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~g 387 (464)
T PRK06938 326 A--------------GTF-RGNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLG 387 (464)
T ss_pred C--------------CCC-CcCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEE
Confidence 0 011 11111223334444444333 345566667777777775431 11112111 123344
Q ss_pred EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 426 FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 426 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
+.+...... .+. .. ...........+...+.++|.+.. +... ...+||+.. ....+++||+++++++.
T Consensus 388 ie~~~~~~~------~~~--~~-~~~~~~~~~~~~~~~~~~~Gll~~-~~g~-~~~~l~~~P-pl~it~~eid~~~~~l~ 455 (464)
T PRK06938 388 VEIVDPQGE------PDA--LG-HPPANGELASLIQRECLRRGLILE-LGGR-HGSVVRFLP-PLIITAEQIDEVAEIFA 455 (464)
T ss_pred EEeccCccc------ccc--cc-cCCccHHHHHHHHHHHHHCCeEEe-ecCC-CCCEEEEEC-CCccCHHHHHHHHHHHH
Confidence 444321000 000 00 000001334667777888897543 2211 135799986 45778899999999999
Q ss_pred HHHHHHHh
Q 010125 506 QHLEAFQS 513 (517)
Q Consensus 506 ~~~~~l~~ 513 (517)
++..++..
T Consensus 456 ~~l~~~~~ 463 (464)
T PRK06938 456 EAVAAAVA 463 (464)
T ss_pred HHHHHHhc
Confidence 99877653
No 364
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.14 E-value=1.5e-07 Score=99.02 Aligned_cols=330 Identities=12% Similarity=0.022 Sum_probs=171.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEE-eCCCCchHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVY-GSDQTHCALQKAAQ 210 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~-~s~~~H~s~~kaa~ 210 (517)
+..+.++.+.|.+++...... ....+++++||+|+..|+..||... ++..|+ ....-|-...-+..
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~~----~~~~f~~~SGsEAve~AlklAr~~t---------gr~~Ii~~~~~yHG~t~~als 166 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGKE----YCLQFTGPSGADAVEAAIKLAKTYT---------GRSNVISFSGGYHGMTHGALA 166 (459)
T ss_pred CHHHHHHHHHHHHhCCCcccc----ceEEEeCCCcHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHh
Confidence 456666778888876422110 0023555899999999999998752 233343 44344433333333
Q ss_pred HcCCC---------CCCEEEEecCCCCCc------ccCHHHHHHHHHHhHh----cCCcceEEEeeccCCccccccC---
Q 010125 211 IVGID---------VKNFRAIKTTKSSSY------GLSPDSLMAQINSDVE----VGLIPLFLCATIGTTAITAVDP--- 268 (517)
Q Consensus 211 ~~G~g---------~~~v~~vp~d~~~~~------~~d~~~Le~~i~~~~~----~g~~p~~vv~t~gtt~~G~idp--- 268 (517)
+.|-. ...+..+|....-.. .-+.+++++.+++... ....+.+|++.-.....|.+-|
T Consensus 167 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~ 246 (459)
T PRK06931 167 VTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVE 246 (459)
T ss_pred hcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHH
Confidence 32210 113445553210000 1134455444433322 1223456666544444565533
Q ss_pred -hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 010125 269 -LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 -l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
+++|.++|++||+.+++|..+.|+.....-+.....++ ..|.+++ -|.++..++.|++..++. + +.+. +..
T Consensus 247 yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~--~-~~~~--~~~ 318 (459)
T PRK06931 247 WLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE--F-DAWQ--PGG 318 (459)
T ss_pred HHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHHH--H-hhcc--CCC
Confidence 89999999999999999999877643222111111233 5888887 688876677888776533 2 2331 111
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCHFAV 423 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~~~~ 423 (517)
.. .|+ .+.+.......++++.+..++ ..++..++.++|.+.|++ .|.+.-+ .-...+
T Consensus 319 ~~--------------~T~-~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~v-rG~Glm 379 (459)
T PRK06931 319 HT--------------GTF-RGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNV-RGRGLM 379 (459)
T ss_pred CC--------------CCC-CCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeE-ecCceE
Confidence 00 011 111222233334444443333 445566666677666654 3321111 112234
Q ss_pred EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 010125 424 VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTV 503 (517)
Q Consensus 424 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~ 503 (517)
+.+.+...... .+.. .... .+ ......+.+.+.++|.+... ... ...++|+.. ....+++||++++++
T Consensus 380 ~giel~~~~~~------~~~~-~~~~-~~-~~~~~~~~~~~~~~Gvl~~~-~~~-~~~~l~~~P-pl~it~~eid~~~~~ 447 (459)
T PRK06931 380 IGIEIVDERQP------ADAM-GSYP-AD-GELAAAIQKACFENGLLLER-GGR-NGNVVRLLP-PLLITQAECEEFIDR 447 (459)
T ss_pred EEEEEccCccc------cccc-ccCC-cc-HHHHHHHHHHHHHCCcEEee-cCC-CCCEEEEEC-CCCcCHHHHHHHHHH
Confidence 44544322000 0000 0000 00 12346677788888975432 211 235799987 467788999999999
Q ss_pred HHHHHHHHHh
Q 010125 504 VQQHLEAFQS 513 (517)
Q Consensus 504 l~~~~~~l~~ 513 (517)
+.++..++.+
T Consensus 448 l~~~l~~~~~ 457 (459)
T PRK06931 448 FEQALLAAVK 457 (459)
T ss_pred HHHHHHHHHh
Confidence 9999887664
No 365
>PRK07046 aminotransferase; Validated
Probab=99.13 E-value=4.5e-08 Score=102.66 Aligned_cols=312 Identities=14% Similarity=0.063 Sum_probs=166.2
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
.+..|.++.+.++++++++ ...|+++||||+..|+..||... | ...+|-....-|-...-...
T Consensus 113 ~~~~~~~lAe~l~~~~~~~---------~v~F~nSGtEA~e~AlrlAR~~T----G----r~~ii~~~g~YHG~~d~~l~ 175 (453)
T PRK07046 113 PSEDAAWVGEELARRFGLP---------YWQVATTATDANRFVLRWARAVT----G----RPKILVFNGCYHGTVDDVFV 175 (453)
T ss_pred CCHHHHHHHHHHHHHhCCC---------EEEEECCHHHHHHHHHHHHHHhh----C----CCEEEEECCCCCCCcHHhHh
Confidence 3567777888888887533 57999999999999999998752 1 22233344334432111111
Q ss_pred H--c----------CCC---CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhH
Q 010125 211 I--V----------GID---VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKP 271 (517)
Q Consensus 211 ~--~----------G~g---~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~e 271 (517)
. . |+. ...+..+|. -|+++|++.+.. ....+|++.-.....|.+-| +++
T Consensus 176 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~ 243 (453)
T PRK07046 176 DLVDGRPVQRPGLLGQVHDLTATTRVVEF-------NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEA 243 (453)
T ss_pred hccCCCCCCCCCCCCCCccccCceEeeCC-------CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHH
Confidence 1 0 110 001222221 178999988842 12446666655555566654 899
Q ss_pred HHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCC-ccccCC
Q 010125 272 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTN-PEYLKN 350 (517)
Q Consensus 272 I~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~-~~yl~~ 350 (517)
+.++|++||+.+++|..+. +-.-.-.....+ ++ ..|.+++ -|.++..+++|++..++. +-+.+... ......
T Consensus 244 lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~-gv-~PDi~t~--gK~lggG~Pi~av~g~~~--i~~~~~~~~~~~~~~ 316 (453)
T PRK07046 244 LRELTRRYGTLLVIDETHT-ISSGPGGYTRAH-GL-EPDFLVV--GKPIAGGVPCAVYGFSAE--LAERAQAAKASAPPG 316 (453)
T ss_pred HHHHHHHhCCEEEEEcccc-CccCCcchhHHh-CC-Cccceee--hhhhcCCCcceeeeehHH--HHHHHhhccccCCCC
Confidence 9999999999999999874 100000111111 34 5788774 799987788999888654 22233210 000000
Q ss_pred ccccccccccCCCccccCCCCCCchHH---HHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCCCee
Q 010125 351 KATESMQVVDYKDWQITLSRRFRSLKL---WFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKR-FEIVFPCHFA 422 (517)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~-~~l~~~~~~~ 422 (517)
......+-...++.. .++++.+-.+ +..++..++.++|++.|++ .+- +.+.... .
T Consensus 317 ------------~~~~~~T~~gnpl~~aa~~a~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G--~ 379 (453)
T PRK07046 317 ------------HSGIGTTLSANALAMAAMRATLAEVMTE---AAYAHMLALAARLAAGLRAVIARHGLPWHVTRVG--A 379 (453)
T ss_pred ------------CceeCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC--c
Confidence 000111112233333 3344444222 2455666666666666653 321 2222222 2
Q ss_pred EEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHH
Q 010125 423 VVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWT 502 (517)
Q Consensus 423 ~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~ 502 (517)
++.+.+.+...+.. .+..+ . .-......+...+.++|..+ .+. + ..++++. ..+++||+++++
T Consensus 380 ~~~i~~~~~~~~~~----~~~~~---~--~~~~~~~~~~~~~~~~Gv~~-~~~---~-~~~~~~p---~~t~~did~~~~ 442 (453)
T PRK07046 380 RVEFQFAPTPPRNG----AEAAA---A--LDPELEAALHLYLLNRGVLI-TPF---H-NMMLVCP---ATTAADVDRLVA 442 (453)
T ss_pred EEEEEEeCCCCCCH----HHHhc---c--cCHHHHHHHHHHHHHCCCEE-ecc---c-CcEEEeC---CCCHHHHHHHHH
Confidence 33333322110000 00000 0 00134566777788889754 321 1 3467664 368889999999
Q ss_pred HHHHHHHHHH
Q 010125 503 VVQQHLEAFQ 512 (517)
Q Consensus 503 ~l~~~~~~l~ 512 (517)
++.++.+++.
T Consensus 443 ~~~~~l~~~~ 452 (453)
T PRK07046 443 AFDACLGELL 452 (453)
T ss_pred HHHHHHHHHh
Confidence 9999887764
No 366
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.13 E-value=6.9e-08 Score=100.49 Aligned_cols=310 Identities=10% Similarity=-0.010 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
....++.+.|+++.+-+- ....|+++||+|+..|+..||.....+ |..+ ..-+|......|-...-+..+.
T Consensus 83 ~~~~~lae~L~~~~p~~~-------~~v~f~~SGseA~e~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~als~~ 153 (422)
T PRK05630 83 EPAIKLTRKLLNLTDNGL-------DHVFYSDSGSVSVEVAIKMALQYSKGQ-GHPE-RTRLLTWRSGYHGDTFAAMSVC 153 (422)
T ss_pred HHHHHHHHHHHhhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCccHHHhccC
Confidence 334556677777653211 157999999999999999998753221 2111 1224445545554333333332
Q ss_pred CC--------C--CCCEEEEecCCCCCcccC-------HHHHHHHHHHhHhcCCcceEEEeecc-CCccccc----cChh
Q 010125 213 GI--------D--VKNFRAIKTTKSSSYGLS-------PDSLMAQINSDVEVGLIPLFLCATIG-TTAITAV----DPLK 270 (517)
Q Consensus 213 G~--------g--~~~v~~vp~d~~~~~~~d-------~~~Le~~i~~~~~~g~~p~~vv~t~g-tt~~G~i----dpl~ 270 (517)
+- + ...+..+|.... ...+ .+.+++.+.+ ...+|++.-. ....|.+ +.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~ 225 (422)
T PRK05630 154 DPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIE 225 (422)
T ss_pred CCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHH
Confidence 21 0 012344443210 0112 2334444432 2334555432 3334543 4589
Q ss_pred HHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCC-c-cc
Q 010125 271 PLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTN-P-EY 347 (517)
Q Consensus 271 eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~-~-~y 347 (517)
+|.++|++||+.+++|.++.|+.....-+.....++ ..|.+++ -|.++..+ ..|++++++. +.+.+... . ..
T Consensus 226 ~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~ 300 (422)
T PRK05630 226 GVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDK--VAQLISTPNGGGA 300 (422)
T ss_pred HHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccHH--HHHHHhccCCCCc
Confidence 999999999999999999966532211111111123 4677754 79986543 5677776544 22333211 0 00
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCeeEEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP--CHFAVVC 425 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~--~~~~~v~ 425 (517)
+.. ..|+ .+.+..+....++++.+..+ +..++..++.++|++.|+++.....+.+ -...++.
T Consensus 301 ~~h------------~~T~-~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ 364 (422)
T PRK05630 301 LMH------------GPTF-MANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGV 364 (422)
T ss_pred ccc------------CCCC-cCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEE
Confidence 000 0011 11112223344455555433 3445677777888777764321111111 1233444
Q ss_pred EEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHH
Q 010125 426 FRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQ 505 (517)
Q Consensus 426 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~ 505 (517)
+.+.... ....+.+.+.++|... .. .| .++|+.. ....+++||++++++|+
T Consensus 365 ie~~~~~-----------------------~~~~~~~~~~~~Gl~~-~~---~g-~~l~~~P-pL~it~~~i~~~~~~l~ 415 (422)
T PRK05630 365 VEMEQPV-----------------------DMEEATQAAVDHGVWL-RP---FG-RLVYVMP-PYITTSEQIAQICAALA 415 (422)
T ss_pred EEECCcc-----------------------cHHHHHHHHHHCCeEE-Ee---cC-CEEEEEC-CccCCHHHHHHHHHHHH
Confidence 4443220 1245667777888654 22 13 5789987 46788999999999998
Q ss_pred HHHH
Q 010125 506 QHLE 509 (517)
Q Consensus 506 ~~~~ 509 (517)
++.+
T Consensus 416 ~al~ 419 (422)
T PRK05630 416 AAVK 419 (422)
T ss_pred HHHh
Confidence 8764
No 367
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.13 E-value=6.3e-08 Score=101.45 Aligned_cols=311 Identities=10% Similarity=0.047 Sum_probs=160.9
Q ss_pred HHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHH---hcccCC-CCeEEEeCCCCchHHHHHHHH
Q 010125 136 NIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNK---IGRENI-SKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 136 ~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~---~g~~~~-~~~~v~~s~~~H~s~~kaa~~ 211 (517)
.++.+.|.++.+ ++.. ....|++||||||..|+..||.....+ .|.... ...+|.....-|-...-+..+
T Consensus 95 ~~la~~l~~~~~-p~~~-----~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~ 168 (443)
T PRK08297 95 ARFVDTFARVLG-DPEL-----PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSL 168 (443)
T ss_pred HHHHHHHHhhcC-CCCC-----CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhh
Confidence 345555666552 2221 257999999999999999998753211 121000 123444444455433333333
Q ss_pred cCCCCC--------CEEEEecCC------CCC----c---ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc----
Q 010125 212 VGIDVK--------NFRAIKTTK------SSS----Y---GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV---- 266 (517)
Q Consensus 212 ~G~g~~--------~v~~vp~d~------~~~----~---~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i---- 266 (517)
.|.... ....+|... ..+ - .-+++++++.+.+ .+..+.+|++.-.....|.+
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~ 245 (443)
T PRK08297 169 TNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRP 245 (443)
T ss_pred cCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCH
Confidence 331000 000111100 000 0 0134555666653 22345667776555555665
Q ss_pred cChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCch-hHH-hhhcCC
Q 010125 267 DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPR-ALV-SSLSTN 344 (517)
Q Consensus 267 dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~-~~~-~~~~~~ 344 (517)
+.+++|.++|++||+++++|+.+.|+.....-+....-++ ..|.+++ .|.+ | .|.++++++- ... ..+..
T Consensus 246 ~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~i~~~~~~~~~~- 317 (443)
T PRK08297 246 EFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRRVDEVEDNVFAV- 317 (443)
T ss_pred HHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchHHHHhhhhhccC-
Confidence 5599999999999999999999977633211111111133 5788875 6776 3 3444444321 010 01100
Q ss_pred ccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCe--EEecC
Q 010125 345 PEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRF--EIVFP 418 (517)
Q Consensus 345 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~--~l~~~ 418 (517)
..+.. .|+ .+.........++++.+..+ +.+++..++.++|.+.|++ .|.+ ++-
T Consensus 318 ~~~~~--------------~T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vr-- 377 (443)
T PRK08297 318 SSRIN--------------STW-GGNLVDMVRARRILEVIEED---GLVENAARQGEYLLARLEELAAEFPAVVSNVR-- 377 (443)
T ss_pred ccccC--------------CCC-CccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHCCCcceeee--
Confidence 00000 011 11111122333344444333 4556666777777777754 3322 221
Q ss_pred CCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHH
Q 010125 419 CHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVV 498 (517)
Q Consensus 419 ~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~ 498 (517)
....++.+.+... .....+.+.+.++|.++.. .+...+|++. ....+++||+
T Consensus 378 g~G~~~~i~~~~~-----------------------~~~~~~~~~l~~~Gvl~~~----~~~~~lr~~P-~l~~t~~eid 429 (443)
T PRK08297 378 GRGLMCAFDLPTT-----------------------ADRDEVIRRLWEEGVLVLP----CGERSIRFRP-ALTVTTEEID 429 (443)
T ss_pred ccceEEEEEecCH-----------------------HHHHHHHHHHHHCCEEEec----CCCCeEEEEC-CccCCHHHHH
Confidence 2334555555321 2345677788888975432 1335689987 4567888999
Q ss_pred HHHHHHHHHHHHH
Q 010125 499 VAWTVVQQHLEAF 511 (517)
Q Consensus 499 ~l~~~l~~~~~~l 511 (517)
+++++|.++.+++
T Consensus 430 ~~l~~l~~~l~~~ 442 (443)
T PRK08297 430 AAIDALRRALPEV 442 (443)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887754
No 368
>PRK06148 hypothetical protein; Provisional
Probab=99.11 E-value=7.4e-08 Score=110.40 Aligned_cols=324 Identities=12% Similarity=0.054 Sum_probs=176.9
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
.+.+.++.+.|++++.-+- ....|+++|||||..|+..||... | .+.+|.....-|-...-+..+
T Consensus 662 ~~~~~~lAe~L~~~~p~~~-------~~v~f~nSGsEA~e~AlklAr~~t----G----r~~ii~~~~~YHG~t~~a~s~ 726 (1013)
T PRK06148 662 HDAIVAYAERLTATLPDGL-------TVAFFVNSGSEANSLALRLARAHT----G----QRDAIVLDHAYHGTTTELIDL 726 (1013)
T ss_pred CHHHHHHHHHHHHhCCCCc-------CEEEEeCCcHHHHHHHHHHHHHhc----C----CCeEEEEcCCccCCCcchhhc
Confidence 3445566777777763211 157899999999999999998752 1 222344444444322222221
Q ss_pred c--------CCC-CCCEEEEecCCC--CCcc--------cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----
Q 010125 212 V--------GID-VKNFRAIKTTKS--SSYG--------LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---- 268 (517)
Q Consensus 212 ~--------G~g-~~~v~~vp~d~~--~~~~--------~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---- 268 (517)
. +.+ ...+..++.... ..+. -..+.++++++.....+..+.+|++.-.....|.+-|
T Consensus 727 s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~y 806 (1013)
T PRK06148 727 SPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGY 806 (1013)
T ss_pred CchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHH
Confidence 1 111 113333322100 0011 1124567666543333445667776665555677766
Q ss_pred hhHHHHHHHHhCCeEEcccccccccccCcc-ccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccc
Q 010125 269 LKPLCDVAKQFGIWVHVDAAYAGSACICPE-FRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEY 347 (517)
Q Consensus 269 l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~-~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~y 347 (517)
+++|.++|++||+.+++|..+.|+...... +.....|+ ..|.+++ -|.++..+..|+++++++ +.+.+.....+
T Consensus 807 l~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav~~~~e--i~~~~~~g~~~ 881 (1013)
T PRK06148 807 LREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAVVTTRE--IADSFDNGMEY 881 (1013)
T ss_pred HHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEEEEcHH--HHhhccCCCcc
Confidence 999999999999999999999776432221 11111234 5788776 799987788999998643 22233211001
Q ss_pred cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CeeEE
Q 010125 348 LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPC--HFAVV 424 (517)
Q Consensus 348 l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~--~~~~v 424 (517)
.+ |+ .+.........++++.+-.+ +..++..++.++|++.|+++. ...++... ...++
T Consensus 882 -~~--------------Tf-~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~ 942 (1013)
T PRK06148 882 -FN--------------TF-GGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFL 942 (1013)
T ss_pred -cc--------------CC-CCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEE
Confidence 00 11 12122223334445545443 345566667777777775531 11111111 12233
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
.+.+..... ..+........+.+.+.++|.+. .+.... ..++|+.. ....+++|||+++++|
T Consensus 943 gvel~~~~~---------------~~~~~~~~~~~i~~~~~~~Gvl~-~~~g~~-~~vlr~~P-pl~it~~~id~~l~~l 1004 (1013)
T PRK06148 943 GIELVTDRK---------------TKAPATAIARYVKNGARERGILI-GTEGPH-DNVLKIRP-PLIFSRADADHLLEVL 1004 (1013)
T ss_pred EEEecCCcc---------------ccCccHHHHHHHHHHHHhCCeEE-eccCCC-CCEEEEeC-CccCCHHHHHHHHHHH
Confidence 444432100 00000234567888888889754 332111 36799987 5678889999999999
Q ss_pred HHHHHHHH
Q 010125 505 QQHLEAFQ 512 (517)
Q Consensus 505 ~~~~~~l~ 512 (517)
.++..++.
T Consensus 1005 ~~~l~~~~ 1012 (1013)
T PRK06148 1005 DDVLAAAL 1012 (1013)
T ss_pred HHHHHHHh
Confidence 99887653
No 369
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.11 E-value=6.8e-08 Score=93.50 Aligned_cols=291 Identities=13% Similarity=0.071 Sum_probs=176.1
Q ss_pred HHHHHHHHhcc-ccccc------ccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEE-cCCchHHHHHHHHHHHH
Q 010125 108 GFLGEMLSSGF-NIVGF------NWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVI-QGTTCEAILCTLTAARD 179 (517)
Q Consensus 108 ~~~~~~l~~~~-n~~~~------~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~-t~ggt~a~~~al~~ar~ 179 (517)
-.+.|+|-+.+ |.++- -|....-..++|.-+.+.-.+.||++++. ++.-+ .-+||-||+.+-.+...
T Consensus 54 ~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~k-----WGVNVQp~SGSPANfavYtall~ 128 (477)
T KOG2467|consen 54 RAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEK-----WGVNVQPYSGSPANFAVYTALLK 128 (477)
T ss_pred HHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHH-----CceeeccCCCCchhhHHHhhhcC
Confidence 34555555554 22222 23334457889999999999999998874 23323 34788899755444332
Q ss_pred HHHHHhcccCCCCeEEE---eCCCCchHHHHH---HHHcCCCC-CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcce
Q 010125 180 RVLNKIGRENISKLIVY---GSDQTHCALQKA---AQIVGIDV-KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPL 252 (517)
Q Consensus 180 ~~~~~~g~~~~~~~~v~---~s~~~H~s~~ka---a~~~G~g~-~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~ 252 (517)
|..+|. .++-.|.|.--. =++..... -+-....+|+ .+|-||-|.||+.-..- +|.
T Consensus 129 -----------Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~-~TG~IDYD~Le~~A~~f-----rPk 191 (477)
T KOG2467|consen 129 -----------PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP-STGYIDYDKLEKTATLF-----RPK 191 (477)
T ss_pred -----------CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC-CCCceehHHHHHHHHhc-----CCc
Confidence 222332 344455442111 11111100 0111234454 36899999999875543 465
Q ss_pred EEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEe
Q 010125 253 FLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVK 332 (517)
Q Consensus 253 ~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~ 332 (517)
++++ |++...-.-|.+.+.+||.+.|.+|.+|-||-.+........+- ++.+|+++...||.|-.|.+ |+++.|
T Consensus 192 ~iia--G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsP---Fey~DiVTTTTHKsLRGPRg-~mIFyR 265 (477)
T KOG2467|consen 192 LIIA--GTSAYSRLIDYARFRKIADKVGAYLMADMAHISGLVAAGVIPSP---FEYCDIVTTTTHKSLRGPRG-AMIFYR 265 (477)
T ss_pred EEEe--ccccchhhccHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCc---ccccceeeccccccccCCcc-eeEEEe
Confidence 5543 55566666789999999999999999999996655433222222 46999999999999999974 555555
Q ss_pred CchhHHhhh-cCCccccCCccccccccccCC-CccccCCCCCCc-hHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010125 333 DPRALVSSL-STNPEYLKNKATESMQVVDYK-DWQITLSRRFRS-LKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG 409 (517)
Q Consensus 333 ~~~~~~~~~-~~~~~yl~~~~~~~~~~~~~~-~~~~~~sr~~~a-l~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~ 409 (517)
..-.-...- .....|=. +...++. --++|++-.-.. .++..+|+....-.|.+..++..++++.|.+.|.+
T Consensus 266 kGvk~~~~k~g~~i~ydl------E~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~ 339 (477)
T KOG2467|consen 266 KGVKSIKPKQGKEILYDL------EDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALIS 339 (477)
T ss_pred ccCCcCCCCCCCcceech------hhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 421110000 00111110 1111211 114555554433 46667888887788899999999999999999988
Q ss_pred CCCeEEecC-CCeeEEEEEecCCCc
Q 010125 410 DKRFEIVFP-CHFAVVCFRVSPSPV 433 (517)
Q Consensus 410 ~~~~~l~~~-~~~~~v~f~~~~~~~ 433 (517)
. |++++.. .+..+|.+.+.+.++
T Consensus 340 ~-Gy~lvtgGTDnHlvLvDLr~~G~ 363 (477)
T KOG2467|consen 340 R-GYKLVTGGTDNHLVLVDLRPKGV 363 (477)
T ss_pred c-CceEecCCccceEEEEeccccCC
Confidence 7 8988853 455677777777653
No 370
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.10 E-value=1.8e-08 Score=98.31 Aligned_cols=305 Identities=12% Similarity=0.054 Sum_probs=176.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHH
Q 010125 128 SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQK 207 (517)
Q Consensus 128 sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~k 207 (517)
+.....+-.++.+.+++++++|+++ .-+++.+|+|...-++.+..... . +..-|.+..-+..+...
T Consensus 45 sk~~~~v~~~a~~~lreLl~iPd~Y-----~VlflqGGat~qf~~~p~nLl~~-------~--~~~yv~~g~Ws~~a~~e 110 (365)
T COG1932 45 SKEFKNVLEEAEKDLRELLNIPDDY-----KVLFLQGGATGQFAMAPMNLLGK-------R--GTDYVDTGAWSEFAIKE 110 (365)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCccHHHHHHHHHhhhcc-------c--CceeEeeeehhHhHHHH
Confidence 3445566667889999999999986 23555566665554444443321 0 11123333334444544
Q ss_pred HHHHcC-CCCCCEEEEecCCCCCccc-CHHHHHHHHHHhHhcCCcceEEEeeccCCccccc-cChhHHHHHHHHhCCeEE
Q 010125 208 AAQIVG-IDVKNFRAIKTTKSSSYGL-SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 208 aa~~~G-~g~~~v~~vp~d~~~~~~~-d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i-dpl~eI~~i~~~~gi~lh 284 (517)
|-++.. . .+..+.....+-+.+ +++..+ +.++. ..|..+...|.+|.- .+...+.. +..++
T Consensus 111 A~~~~~~~---~~~~~~~~~~~~~~iP~~~~~~--~~~~~------ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~~v 174 (365)
T COG1932 111 AKKVGKQP---KLIDARIEEAGYGSIPDLSKWD--FSDND------AYVHFCWNETISGVEVPELPDIGS-----DGLLV 174 (365)
T ss_pred HHHhcccc---cccccceeccCccCCCChhhcc--cCCCc------cEEEEecCCcccceEccCCCCCCC-----CceEE
Confidence 444433 2 222222111111222 333332 22221 268888888889964 33343321 16888
Q ss_pred cccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCC
Q 010125 285 VDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKD 363 (517)
Q Consensus 285 vDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~ 363 (517)
+|++-+.+....+ +.+.|.|.++.+|.++ |-|.+++++|+... .+.-.. .|.-+. +..
T Consensus 175 ~D~SS~ilsr~iD--------vsk~dviyagaQKnlG-paGltvvIvr~~~l-~r~~~~~~P~if~-----------y~~ 233 (365)
T COG1932 175 ADASSAILSRPID--------VSKYDVIYAGAQKNLG-PAGLTVVIVRPDLL-ERAESYTLPSIFD-----------YLT 233 (365)
T ss_pred EecccHHhcCCCC--------hhHcceEEEehhhccC-ccceEEEEEcHHHH-hcccccCCchHhh-----------chh
Confidence 9987655554443 4488999999999996 67899999986643 222111 111111 100
Q ss_pred ccccCCC--CCCchHHHHH---HHHh-cHHHHHHHHHHHHHHHHHHHHHHhcCCCeEE-e-cC--CCeeEEEEEecCCCc
Q 010125 364 WQITLSR--RFRSLKLWFV---IRNY-GVANLRHFLRSHVNMAKLFERLVSGDKRFEI-V-FP--CHFAVVCFRVSPSPV 433 (517)
Q Consensus 364 ~~~~~sr--~~~al~~~~~---l~~~-g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l-~-~~--~~~~~v~f~~~~~~~ 433 (517)
.....+. ....+.++.. ++.+ ..-|++++.++..+.++.|++.|.+. +|.. . .+ .....|||.+..
T Consensus 234 ~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~~RS~mnV~f~~~~--- 309 (365)
T COG1932 234 HADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKANRSRMNVTFTLVD--- 309 (365)
T ss_pred hhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-CccccccchhhccceeEEEEcCc---
Confidence 0000110 0122333332 2322 45588899999999999999999887 4432 1 11 234568998874
Q ss_pred chhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 434 LMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
.++.+.+.+.+.+.|.+...+... .+.+|+++- .....++++.|++-++...++
T Consensus 310 --------------------~~ld~~fv~eae~~gl~~lkGhr~--vgGmRasiy-nA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 310 --------------------AELDKGFVAEAEAAGLIYLKGHRS--VGGLRASIY-NAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred --------------------HHHHHHHHHHHHHcCCceeccccC--CCceeeeee-cCCCHHHHHHHHHHHHHHHHh
Confidence 356788888888888877666322 234999985 477788999999888877554
No 371
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.08 E-value=6e-08 Score=101.39 Aligned_cols=303 Identities=9% Similarity=0.015 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeC-CCCchHHHHH--
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGS-DQTHCALQKA-- 208 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s-~~~H~s~~ka-- 208 (517)
...+.++.+.|.+++... ....|+++||+|+..|+..||... ++..|+.. ...+.+....
T Consensus 87 ~~~~~~la~~l~~~~p~~--------~~v~f~~sGseA~e~AlklAr~~t---------gr~~i~~~~~~~~h~~~~~~~ 149 (431)
T PRK06209 87 SAIELDAAESFLELIDGA--------DMVKFCKNGSDATSAAVRLARAYT---------GRDLVARCADHPFFSTDDWFI 149 (431)
T ss_pred CHHHHHHHHHHHHhCCcc--------ceEEEecCHHHHHHHHHHHHHHHh---------CCCeEEEeccCcccccccccc
Confidence 344556677788876311 157899999999999999998752 22233322 1222111110
Q ss_pred -HHH--cCCCCC---CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 209 -AQI--VGIDVK---NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 209 -a~~--~G~g~~---~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
... .|.... .+..++ .-|+++|++++++.. ..+.+|++.......+..+.+++|.++|++||+.
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~---~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~l 219 (431)
T PRK06209 150 GTTPMSAGIPASVSALTVTFR-------YNDIASLEALFEDHP---GRIACVILEPATADEPQDGFLHEVRRLCHENGAL 219 (431)
T ss_pred ccCCCCCCCChhHhccccccC-------CCCHHHHHHHHHhCC---CCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCE
Confidence 000 011000 011111 127899999986421 2233455543332233344599999999999999
Q ss_pred EEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCC
Q 010125 283 VHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYK 362 (517)
Q Consensus 283 lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 362 (517)
+++|+++.|+......... .-++ ..|.++ ..|.++..+..|++.+++. +.+.+... ..+.. .
T Consensus 220 LI~DEv~tG~~~~~~g~~~-~~gv-~PDi~t--~gK~lggG~p~~av~~~~~--i~~~~~~~---~~~~~---------~ 281 (431)
T PRK06209 220 FILDEMITGFRWHMRGAQK-LYGI-VPDLSC--FGKALGNGFAVSALAGKRE--YMELGGLE---HTDRE---------R 281 (431)
T ss_pred EEEEcccccCCcCcchhhH-HhCC-Ccceee--ehhhhcCCcccEEEEEHHH--HHhhhccc---ccCCC---------C
Confidence 9999999665321100110 1133 467655 4799987666888877543 22221100 00000 0
Q ss_pred CccccCCCC---CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeE--EecCCCeeEEEEEecCCCc
Q 010125 363 DWQITLSRR---FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFE--IVFPCHFAVVCFRVSPSPV 433 (517)
Q Consensus 363 ~~~~~~sr~---~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~--l~~~~~~~~v~f~~~~~~~ 433 (517)
.+....+.. ....+..++++.+..++ ..++..++.++|++.|++ .+ +. +-..-....+.+......
T Consensus 282 ~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~~~~~- 356 (431)
T PRK06209 282 VFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHG-LQDHVRVSGRPCCLTYSTLDGN- 356 (431)
T ss_pred ceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeecceEEEEEecCCcc-
Confidence 000011111 12234445566554433 345555566666666543 32 21 111111111222111110
Q ss_pred chhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 434 LMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
... .......+.+.+.+.|... + .++++ ...+++||+++++++.++.+++.
T Consensus 357 -------------~~~---~~~~~~~~~~~l~~~Gi~~-p--------~l~is---~~ht~~dId~~l~~l~~~l~~~~ 407 (431)
T PRK06209 357 -------------GQP---SQAFRTLFLQETIRRGVLM-P--------SLVVS---YAHGDADIERTIDAVHGALGVYR 407 (431)
T ss_pred -------------cCC---cHHHHHHHHHHHHHCCccc-c--------ccccc---ccCCHHHHHHHHHHHHHHHHHHH
Confidence 000 0223456777788888743 2 13333 34578899999999999988764
No 372
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.06 E-value=1.6e-07 Score=98.30 Aligned_cols=291 Identities=10% Similarity=0.008 Sum_probs=147.3
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHH---HhcccCC-CCeEEEeCCCCchHHHHHHHHcCCCCCC-----E---EEE--e-
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLN---KIGRENI-SKLIVYGSDQTHCALQKAAQIVGIDVKN-----F---RAI--K- 223 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~---~~g~~~~-~~~~v~~s~~~H~s~~kaa~~~G~g~~~-----v---~~v--p- 223 (517)
..+|+++||+||..|+..||....+ ..|.... +..+|.....-|-...-+....|-.... . ..+ |
T Consensus 105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~ 184 (431)
T TIGR03251 105 HLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK 184 (431)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCc
Confidence 5789999999999999999875211 0111000 1234445545554433333333321000 0 001 1
Q ss_pred ----cCCCC-C----c-ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc----cChhHHHHHHHHhCCeEEccccc
Q 010125 224 ----TTKSS-S----Y-GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV----DPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 224 ----~d~~~-~----~-~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i----dpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
.+... . . .-+++++++.+.. .+..+.+|++.-.....|.+ +.+++|.++|++||+.|++|+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 185 LTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 10000 0 0 0124445555542 23346677777655556765 46999999999999999999999
Q ss_pred ccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCch-hHHh-hhcCCccccCCccccccccccCCCcccc
Q 010125 290 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDPR-ALVS-SLSTNPEYLKNKATESMQVVDYKDWQIT 367 (517)
Q Consensus 290 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~-~~~~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 367 (517)
.|+.....-+.....++ ..|.+++ .|.+ | .+|++ .+++- .... .+. .+... ..++
T Consensus 262 tG~GrtG~~~a~~~~gv-~PDi~~~--gK~~--~-~~g~~-~~~~i~~~~~~~~~-~~~~~--------------~~T~- 318 (431)
T TIGR03251 262 TGVGLTGTAWAYQQLGV-QPDIVAF--GKKT--Q-VCGIM-AGRRVDEVADNVFA-VPSRL--------------NSTW- 318 (431)
T ss_pred hccCccchHHHHHhcCC-CCCEEEe--cccC--c-cceEE-ecchHHHhhhhccc-Ccccc--------------CCCC-
Confidence 87643211111111233 5888875 4554 3 24444 43321 1110 110 00000 0011
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEecCCCcchhhhhhhhh
Q 010125 368 LSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYV 443 (517)
Q Consensus 368 ~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 443 (517)
.+.........++++.+..++ .+++..++.++|.+.|++ .+++..-......++.+.+...
T Consensus 319 ~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~~------------ 383 (431)
T TIGR03251 319 GGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPST------------ 383 (431)
T ss_pred CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCCH------------
Confidence 111112223344455543333 334445555566555543 3322111112234445555321
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 444 NCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 444 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
.....+.+.+.++|.++.. .+...+|++. ....+++||++++++|.+
T Consensus 384 -----------~~~~~~~~~l~~~Gvl~~~----~g~~~lr~~P-~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 384 -----------ADRDEVIRQLYREGVLLLG----CGERSIRFRP-PLTVTREEIDAAIDAIRR 430 (431)
T ss_pred -----------HHHHHHHHHHHhCCeEEec----CCCCeEEEEC-CccCCHHHHHHHHHHHHh
Confidence 2345677888888875422 1335699987 567888999999999875
No 373
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.06 E-value=3.6e-07 Score=89.54 Aligned_cols=288 Identities=13% Similarity=0.017 Sum_probs=164.9
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCC-----------
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKS----------- 227 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~----------- 227 (517)
..+|+++|||||-+||+.||... | .-.+|-.....|-+-.-++.+.|++ .++-+....
T Consensus 111 ~vfF~nsGsEANelal~mar~Yt----~----~~diIa~r~~YHG~t~~t~glt~~~---~~k~~~~~~~~~~~~~~~Pd 179 (442)
T KOG1404|consen 111 VVFFVNSGSEANELALKMARLYT----G----NLDIIARRNSYHGNTLYTLGLTGLS---PWKQNFPGVASGVHHTMNPD 179 (442)
T ss_pred EEEEecCCchHHHHHHHHHHHhc----C----CceEEEeeccccCCchhhcccccCC---cccccCCCCCCcccccCCCC
Confidence 58999999999999999998752 1 2234445555666666666666663 222221100
Q ss_pred ---CCccc-----CH----HHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhCCeEEccccccc
Q 010125 228 ---SSYGL-----SP----DSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAG 291 (517)
Q Consensus 228 ---~~~~~-----d~----~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~gi~lhvDaA~g~ 291 (517)
+-+.= -. +.|+..|..+... .+...++..-....|.+.+ +++..++|+|+|..++.|.++.|
T Consensus 180 p~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~--~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtG 257 (442)
T KOG1404|consen 180 PYRGIFGGSNEEEASDRYAKELEDLILYDGPE--TVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTG 257 (442)
T ss_pred cccccCCCCchhhhHHHHHHHHHHHHHhcCCC--ceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhc
Confidence 00000 12 3444444444322 2444444444444577765 89999999999999999999988
Q ss_pred ccccCccccccccCCC----CCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCcccc
Q 010125 292 SACICPEFRHFIDGVE----GADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQIT 367 (517)
Q Consensus 292 ~~~~~~~~~~~~~g~~----~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 367 (517)
+.... . +-|++ --|.+| .-|.++.....|.+++..+ +...+.....|.+. -
T Consensus 258 fGRtG-~----~wgfe~h~v~PDIvT--mAKgiGnG~Pl~AVvtt~E--Ia~v~~~~~~~fnT----------------y 312 (442)
T KOG1404|consen 258 FGRTG-H----MWGFESHGVVPDIVT--MAKGIGNGFPLGAVVTTPE--IADVLNQKSSHFNT----------------Y 312 (442)
T ss_pred ccccc-c----cccccccCCCccHHH--HHhhccCCCcceeeecCHH--HHHHHHhccccccc----------------c
Confidence 76433 1 11222 234444 5699987788899888644 23344333223221 1
Q ss_pred CCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCCC--eeEEEEEecCCCcchhhhhhhhhc
Q 010125 368 LSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPCH--FAVVCFRVSPSPVLMDKLKTKYVN 444 (517)
Q Consensus 368 ~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~~--~~~v~f~~~~~~~~~~~~~~~~~~ 444 (517)
.+.+..+....+.++.+-++ ++.++..+...||.+.|.++. ..+++.+.. .-++-..+...+...+++
T Consensus 313 ggnP~a~avg~aVL~Vikee---~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp------ 383 (442)
T KOG1404|consen 313 GGNPVACAVGLAVLKVIKEE---NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPP------ 383 (442)
T ss_pred CCCchhHHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCc------
Confidence 12222223334455555444 556677889999999987753 355665432 122333333221000010
Q ss_pred cccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHH
Q 010125 445 CLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVV 504 (517)
Q Consensus 445 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l 504 (517)
. ......+-+.+.+.|.. +....+.|. ++|++. ....|++|++.+++..
T Consensus 384 ----~----~~~~~~i~~~cke~Gvl-vg~g~i~G~-vfriaP-PlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 384 ----A----TAEGAVIGEQCKELGVL-VGKGGIHGN-VFRIAP-PLCITKEDIDFAVEYF 432 (442)
T ss_pred ----c----hHHHHHHHHHHHHhCee-eecccccce-EEEecC-CeeccHHHHHHHHHHH
Confidence 1 23345566777777864 466666776 899987 3567888997777655
No 374
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.97 E-value=3e-08 Score=91.75 Aligned_cols=252 Identities=10% Similarity=0.023 Sum_probs=149.7
Q ss_pred eEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHH
Q 010125 193 LIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPL 272 (517)
Q Consensus 193 ~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI 272 (517)
..|+...+++..+.-.|.+.++ .|+.+|.++ +|.|+++++.+.++.+.+ +.++.+|.+.+++|.+-..+.|
T Consensus 112 eKIl~cPPtysMY~v~A~iNd~---eVvkvpl~p--dF~lnvdai~evl~~ds~----iK~~F~tSPgNPtg~~ik~~di 182 (375)
T KOG0633|consen 112 EKILDCPPTYSMYVVDAAINDA---EVVKVPLNP--DFSLNVDAIAEVLELDSK----IKCIFLTSPGNPTGSIIKEDDI 182 (375)
T ss_pred cceeecCCcceeEEEEeecCCc---eEEEecCCC--CccccHHHHHHHHhcccc----ceEEEEcCCCCCCcccccHHHH
Confidence 4455555665444445678888 999999987 799999999999987643 5689999999999999888888
Q ss_pred HHHHHHh-CCeEEcccccccccccCccccccccCCCCCCee-eeccccccC-CCCcceEEEEeCchhHHhh-hcCCcccc
Q 010125 273 CDVAKQF-GIWVHVDAAYAGSACICPEFRHFIDGVEGADSF-SLNAHKWFF-ATLDCCCLWVKDPRALVSS-LSTNPEYL 348 (517)
Q Consensus 273 ~~i~~~~-gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi-~~~~hK~l~-~p~~~g~l~~~~~~~~~~~-~~~~~~yl 348 (517)
-+|.+-- |..++||.||--+......... +. +.-..+ .-.++|.++ +....|+-+..-. +.+. .+..++|-
T Consensus 183 ~KiLe~p~nglVVvDEAYidFsg~~S~~~l-V~--kYpNLivlqTlSKsfGLAGiRvG~~~~~~~--ia~iln~~KaPYN 257 (375)
T KOG0633|consen 183 LKILEMPDNGLVVVDEAYIDFSGVESRMKL-VK--KYPNLIVLQTLSKSFGLAGIRVGYGAFPLS--IAEILNRAKAPYN 257 (375)
T ss_pred HHHHhCCCCcEEEEeeeeEeeccccccchH-hH--hCCceeehhhhhhhcCcceeEeecccccHH--HHHHHHhccCCcc
Confidence 8877643 6889999999655432211111 11 112222 334667665 3444555443211 2111 23344442
Q ss_pred CCccccccccccCCCccccCCCCCCchHHHHHHHHhc---HHHHHHHHHHHHHHHHHHHHHHhcCCCeE-EecCCCeeEE
Q 010125 349 KNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYG---VANLRHFLRSHVNMAKLFERLVSGDKRFE-IVFPCHFAVV 424 (517)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g---~~g~~~~i~~~~~~a~~l~~~l~~~~~~~-l~~~~~~~~v 424 (517)
... +.--+++.++. .+.++...+...+-+.+|...|.++|.+. .+.....|++
T Consensus 258 iS~-----------------------~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFi 314 (375)
T KOG0633|consen 258 ISV-----------------------AGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFI 314 (375)
T ss_pred ccc-----------------------hhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEE
Confidence 211 11122344432 23344555556667778888888887654 2345567777
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHH-hcCcEEEeee-eECCEeEEEEEecCCCCcHHHHHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESIN-ASGKAYMTHA-VLGGIYAIRFATGATLTEKRHVVVAWT 502 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~l~~ 502 (517)
..++.+.. +...+.++.++. +.|.+..-.. ...-++++|++++. +|+-+-+++
T Consensus 315 Li~v~~~~---------------------n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt----~EentvL~k 369 (375)
T KOG0633|consen 315 LIEVTGGD---------------------NGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGT----PEENTVLMK 369 (375)
T ss_pred EEEEcCCC---------------------cHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCC----cccchHHHH
Confidence 77776431 344556655554 4565432222 22236899999863 345555666
Q ss_pred HHHH
Q 010125 503 VVQQ 506 (517)
Q Consensus 503 ~l~~ 506 (517)
.+++
T Consensus 370 ~~K~ 373 (375)
T KOG0633|consen 370 CLKQ 373 (375)
T ss_pred HHHh
Confidence 5554
No 375
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.96 E-value=7.5e-07 Score=90.92 Aligned_cols=322 Identities=11% Similarity=0.052 Sum_probs=169.7
Q ss_pred HHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCe-EEEeCCCCchHHHHHHHHcCCC-
Q 010125 138 VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKL-IVYGSDQTHCALQKAAQIVGID- 215 (517)
Q Consensus 138 v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~-~v~~s~~~H~s~~kaa~~~G~g- 215 (517)
+++.|+++..-. .. ...+|++|||+|+-+|+..++.....+ |.. .+. .|-.....|-+-.-++.+.|..
T Consensus 92 LA~~L~~~aP~~-~l-----~~vFf~~sGSeAvEtAlKma~qY~~~~-G~p--~r~~~Isr~~gYHG~T~ga~Sv~g~~~ 162 (449)
T COG0161 92 LAEKLAELAPEG-GL-----DHVFFTDSGSEAVETALKMALQYWRAR-GQP--QRKKFISRRNGYHGDTLGAMSVGGPVA 162 (449)
T ss_pred HHHHHHHhCCCC-Cc-----cEEEEeCCchHHHHHHHHHHHHHHHhc-CCC--cceEEEEeccCcCcccchheeccCchh
Confidence 445666665411 01 268999999999999999998865433 332 232 3333344555544444444421
Q ss_pred ---------CCCEEEEecCC---CCC-cc------cCHHHHHHHHHHhHhcCCcceEEEeecc-CCccccccC----hhH
Q 010125 216 ---------VKNFRAIKTTK---SSS-YG------LSPDSLMAQINSDVEVGLIPLFLCATIG-TTAITAVDP----LKP 271 (517)
Q Consensus 216 ---------~~~v~~vp~d~---~~~-~~------~d~~~Le~~i~~~~~~g~~p~~vv~t~g-tt~~G~idp----l~e 271 (517)
...+..+|... .+. +. -..++||+.|.+.-. .....+++.-. ....|.+-| +++
T Consensus 163 ~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~--~~IAAfI~EPv~g~agG~~~pp~~Yl~~ 240 (449)
T COG0161 163 LRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGP--ETIAAFIVEPVVGGAGGMLVPPPGYLKR 240 (449)
T ss_pred hhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCc--ccEEEEEecccccccCCcccCChHHHHH
Confidence 01222333321 000 11 235566666654220 23344444433 223566644 899
Q ss_pred HHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhhhcCC-ccccC
Q 010125 272 LCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSSLSTN-PEYLK 349 (517)
Q Consensus 272 I~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~~~~~-~~yl~ 349 (517)
+.+||++||+.|+.|..-.|+.-...-+..--.|+ .-|.+|+. |.|... .+.|.++++++ +.+.|... ..-+.
T Consensus 241 vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~a--KGLT~GY~Pl~a~l~~~~--I~~~~~~~~~~~f~ 315 (449)
T COG0161 241 VREICDKYGILLIADEVATGFGRTGKMFACEHAGI-VPDILCLA--KGLTGGYLPLSAVLTSDR--IYEAFSDGDAGAFM 315 (449)
T ss_pred HHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC-CCCeeeec--ccccccchhhHhHhhhHH--HHHHHhcccCCeec
Confidence 99999999999999998777643322111111122 56777754 777432 34566666544 22344322 11111
Q ss_pred CccccccccccCCCccccCCCCCCchHHHH---HHHHhcHHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEecCC-Ce-eE
Q 010125 350 NKATESMQVVDYKDWQITLSRRFRSLKLWF---VIRNYGVANLRHFLRSHVNMAKLFERLVSG-DKRFEIVFPC-HF-AV 423 (517)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~sr~~~al~~~~---~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~-~~~~~l~~~~-~~-~~ 423 (517)
+ ..+-...+++..+ .++.+-.++ ++++..++..+|.+.|++ +++...+.+. .. .+
T Consensus 316 H----------------G~TYsghPlacAaAla~L~i~e~e~---l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli 376 (449)
T COG0161 316 H----------------GHTYSGNPLACAAALANLDILEEED---LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLI 376 (449)
T ss_pred c----------------CCccccCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceE
Confidence 1 1111223343333 444444444 445556788888888876 4333333332 22 23
Q ss_pred EEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHH
Q 010125 424 VCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTV 503 (517)
Q Consensus 424 v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~ 503 (517)
..+.+..+.- ++.. . -.....++.+...++|.+. -+. |. .+=++. -+..++++|+++++.
T Consensus 377 ~~iElv~d~~----------t~~~--f--~~~~~~~~~~~~~e~Gl~i-Rp~---g~-~i~~~P-Pliit~~eid~l~~~ 436 (449)
T COG0161 377 GAIELVADKA----------TKTP--F--EARVGARVRAAALERGLLI-RPL---GD-VIYLMP-PLIITREEIDELVDA 436 (449)
T ss_pred EEEEEecccc----------cccc--h--hhhHHHHHHHHHHHCCeEE-eec---CC-EEEEcC-CccCCHHHHHHHHHH
Confidence 3455544310 0000 0 1344567788888899754 332 22 333343 345788999999999
Q ss_pred HHHHHHHHHhh
Q 010125 504 VQQHLEAFQSA 514 (517)
Q Consensus 504 l~~~~~~l~~~ 514 (517)
+.+..++..++
T Consensus 437 l~~al~~~~~~ 447 (449)
T COG0161 437 LREALDETLAD 447 (449)
T ss_pred HHHHHHHHHhc
Confidence 99998877654
No 376
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.92 E-value=1.8e-06 Score=85.31 Aligned_cols=224 Identities=15% Similarity=0.034 Sum_probs=130.7
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCC---C-CC-cccC
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTK---S-SS-YGLS 233 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~---~-~~-~~~d 233 (517)
-..|..+||+||..||..||.....+.+.. .--+|..-..-|---.-++...+. .-..+|.++ + .. -.-|
T Consensus 118 rvff~nsGTeAne~ALK~Ark~~~~~~~~~--~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~~ynd 192 (433)
T KOG1401|consen 118 RVFFCNSGTEANETALKFARKFTGKKHPEK--KTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTAEYND 192 (433)
T ss_pred EEEEecCCcHHHHHHHHHHHHhhcccCCcc--ceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeecccCC
Confidence 689999999999999999998754432221 112455554556433334443333 222222211 0 00 0237
Q ss_pred HHHHHHHHHHhHhcCCcceEEEeeccCCccccc--cC--hhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCC
Q 010125 234 PDSLMAQINSDVEVGLIPLFLCATIGTTAITAV--DP--LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGA 309 (517)
Q Consensus 234 ~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i--dp--l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~a 309 (517)
+.+|++.++.... . ...|++....-.-|.+ || +..|..+|+++|+.++.|..+-|+....+.+..-.-++ .-
T Consensus 193 ~t~l~k~~~~h~~--~-IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~P 268 (433)
T KOG1401|consen 193 STALEKLFESHKG--E-IAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-TP 268 (433)
T ss_pred HHHHHHHHHhCCC--c-eEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-CC
Confidence 9999999987652 1 3456666666555554 44 78999999999999999999988665554443322222 45
Q ss_pred CeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHH---HHHHHHhc-
Q 010125 310 DSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKL---WFVIRNYG- 385 (517)
Q Consensus 310 Dsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~---~~~l~~~g- 385 (517)
|..|+ -|.|+...+.|+.+++++- .+.++...+ +.++ .+-...+++. ..++..+.
T Consensus 269 DI~t~--aK~L~gGlPigA~~v~~kV--~~~i~~~~~-l~hg----------------~Tf~gnpLacsa~~~~l~~l~~ 327 (433)
T KOG1401|consen 269 DITTV--AKPLGGGLPIGATGVRDKV--AEMISPGDH-LYHG----------------GTFSGNPLACSAGIKVLDELKD 327 (433)
T ss_pred cceee--hhhccCCceeEEEeehHHH--HhhcCCCCc-cccC----------------cccCCChhhhhHHHHHHHHHcC
Confidence 66664 5888877889999997662 233433222 2111 1111233332 33444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC
Q 010125 386 VANLRHFLRSHVNMAKLFERLVSGDKR 412 (517)
Q Consensus 386 ~~g~~~~i~~~~~~a~~l~~~l~~~~~ 412 (517)
.+.+.+.-+....+++.+.+.+.+-+.
T Consensus 328 ~e~~k~vs~~~k~L~~~l~e~~~~~~~ 354 (433)
T KOG1401|consen 328 PETLKNVSKIGKELRKLLDEYLKKTPN 354 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 344445555556677777777776554
No 377
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.87 E-value=1.4e-06 Score=83.54 Aligned_cols=304 Identities=13% Similarity=0.118 Sum_probs=162.7
Q ss_pred HHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHH----
Q 010125 133 ELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKA---- 208 (517)
Q Consensus 133 ~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~ka---- 208 (517)
.+--+..+.+.++||++. .+=+.+|-||+-+|+..||.|.....+.......++.+-..-|-....+
T Consensus 101 d~~~~f~~~vt~lf~~~k---------vlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s 171 (427)
T KOG1402|consen 101 DVLGEFAEYVTKLFGYDK---------VLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLS 171 (427)
T ss_pred hhHHHHHHHHHHhcCcce---------eeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEec
Confidence 334455578889999874 3556677899999999999886654332211112222222223111000
Q ss_pred ---HHHcCCCCC---CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHH
Q 010125 209 ---AQIVGIDVK---NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQ 278 (517)
Q Consensus 209 ---a~~~G~g~~---~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~ 278 (517)
-...|.|.- .+..||.+ |.++|+.+++... ...+++.--.-..|.+-| ++++.++|.|
T Consensus 172 ~d~ds~~~fgp~~P~~~~~v~Y~-------d~eale~~l~~~~-----vaaFivEPIQGEaGVvvP~~GYL~~vreLCtk 239 (427)
T KOG1402|consen 172 TDPDSWDGFGPFLPGVVDKVPYG-------DAEALEVALKSPN-----VAAFIVEPIQGEAGVVVPPPGYLKKVRELCTK 239 (427)
T ss_pred CCcchhhccCCCCCCcceeeccC-------CHHHHHHHhcCCC-----eeEEEeeccccccceEeCCchhHHHHHHHHHh
Confidence 012222210 24555542 8999999998732 122333333445677744 8999999999
Q ss_pred hCCeEEcccccccccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccc
Q 010125 279 FGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQ 357 (517)
Q Consensus 279 ~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~ 357 (517)
||++++.|..+.|...-..-+..-...+ +-|.+.+ -|.|. .-++.+.+++.+.-.+ ...+.--..
T Consensus 240 ynvl~I~DEvQTGl~RTGk~la~d~env-~PDivil--gKalSGG~~Pvsavl~~~~im~----~~~pgeHgs------- 305 (427)
T KOG1402|consen 240 YNVLLIADEVQTGLARTGKLLACDYENV-RPDIVIL--GKALSGGVYPVSAVLADDDIML----NIKPGEHGS------- 305 (427)
T ss_pred hcEEEEehhhhhcccccCcEEEeehhhc-CCCeEEE--eccccCCeeeeEEEEecHHHHh----ccCCCcccc-------
Confidence 9999999999877653221111001111 4566654 46663 3355666666443211 111111000
Q ss_pred cccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCC-e-EEecC----CCeeEEEEEecCC
Q 010125 358 VVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKR-F-EIVFP----CHFAVVCFRVSPS 431 (517)
Q Consensus 358 ~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~-~-~l~~~----~~~~~v~f~~~~~ 431 (517)
++ ++ ..++...++..+-.---+++.+++..+...|+++|++++. | .++.. --++-+.|...+.
T Consensus 306 -------Ty-gg---NpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~ 374 (427)
T KOG1402|consen 306 -------TY-GG---NPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIVINPSKT 374 (427)
T ss_pred -------cc-CC---ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEEeccccc
Confidence 11 11 3333333333332223356778888899999999987642 2 11111 1123333332222
Q ss_pred CcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 432 PVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
+ ....-.++-.+.+.|... .+ .++ ..+||+. -...+++|+++-+++|.+..
T Consensus 375 ~---------------------~~~aw~~cl~lk~~g~LA-kp-tH~--~IiRfaP-PL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 375 S---------------------GQDAWDVCLALKENGLLA-KP-THG--NIIRFAP-PLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred c---------------------chhHHHHHHccccccccc-CC-CCC--CeEEecC-CcccCHHHHHHHHHHHHHHh
Confidence 1 122234455556667532 22 222 3799987 45678899999999998764
No 378
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.79 E-value=1.1e-05 Score=89.69 Aligned_cols=234 Identities=12% Similarity=0.053 Sum_probs=122.4
Q ss_pred HHHHHHHHHhH--hcCCcceEEEeecc-CCccccccC----hhHHHHHHHHhCCeEEcccccccccccCccccccccCCC
Q 010125 235 DSLMAQINSDV--EVGLIPLFLCATIG-TTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVE 307 (517)
Q Consensus 235 ~~Le~~i~~~~--~~g~~p~~vv~t~g-tt~~G~idp----l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~ 307 (517)
+.+++.|++.. +.+..+.+|++.-. ....|.+-| +++|.++|++||+.|+.|..+.|+.-...-+..-.-|+
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 55666665421 12233445555542 233466543 89999999999999999999988754332222112233
Q ss_pred CCCeeeeccccccCCCC-cceEEEEeCchhHHhhhcCCc--cccCCccccccccccCCCccccCCCCCCchHHHHHHHHh
Q 010125 308 GADSFSLNAHKWFFATL-DCCCLWVKDPRALVSSLSTNP--EYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNY 384 (517)
Q Consensus 308 ~aDsi~~~~hK~l~~p~-~~g~l~~~~~~~~~~~~~~~~--~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~ 384 (517)
..|.+++ -|.++..+ +.|+++++++ +.+.|.... ..+.+. .|+ .+.+.......++++.+
T Consensus 646 ~PDIi~~--gKgLtgG~~Plaa~l~~~~--I~~~f~~~~~~~~~~hg------------~Ty-~gnpl~cAaala~L~~~ 708 (817)
T PLN02974 646 KPDIACY--AKLLTGGLVPLAATLATEE--VFEAFRGPSKLDALLHG------------HSY-TAHPMGCAAAAKALQWY 708 (817)
T ss_pred CCCEEee--cccccCCCCccEEEEEcHH--HHHhhccccccCCcccC------------CCC-CcCHHHHHHHHHHHHHH
Confidence 4788776 48887663 7888888654 223442110 001110 111 11112223334445555
Q ss_pred cHH-HHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHH
Q 010125 385 GVA-NLRHFLRSHVNMAKLFERLV----SGDKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRE 459 (517)
Q Consensus 385 g~~-g~~~~i~~~~~~a~~l~~~l----~~~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (517)
-.+ -++...++...+..++.+.+ ++.|.+.=+ .-...++.+.+..... ..........+
T Consensus 709 ~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V-Rg~Gl~~~iel~~~~~---------------~~~~~~~~a~~ 772 (817)
T PLN02974 709 KDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV-VSLGTVLALELDAEGS---------------GSGYSSLYARS 772 (817)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-EeeeeEEEEEEecCCc---------------ccccchHHHHH
Confidence 332 22334444444555554444 344433211 1112344444443210 00001234566
Q ss_pred HHHHHH-hcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHH
Q 010125 460 LLESIN-ASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 460 l~~~l~-~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~ 508 (517)
+.+.+. ++|.+.. + . | .++|+.. .+.+++++++++++.|.+..
T Consensus 773 v~~~~~~~~Gl~~r-~--~-G-nvi~l~p-P~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 773 VVRRLRREDGIYAR-P--L-G-NVVYLMC-GPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred HHHHHHHhCCEEEE-e--c-C-CEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence 777777 7886542 2 1 2 4788765 67889999999999887653
No 379
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.78 E-value=5e-07 Score=90.10 Aligned_cols=148 Identities=20% Similarity=0.202 Sum_probs=101.4
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEE----EeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCH
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIV----YGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSP 234 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v----~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~ 234 (517)
.+++++..+.|++..+.+... + .+.++ .+. ..|+++...++..|. .++.|... .+-..
T Consensus 85 a~~ivnnn~aAVll~~~al~~------~----~EvVis~g~lV~-gg~~~v~d~~~~aG~---~l~EvG~t----n~t~~ 146 (395)
T COG1921 85 AAAIVNNNAAAVLLTLNALAE------G----KEVVVSRGELVE-GGAFRVPDIIRLAGA---KLVEVGTT----NRTHL 146 (395)
T ss_pred heeeECCcHHHHHHHHhhhcc------C----CeEEEEcccccc-CCCCChhHHHHHcCC---EEEEeccc----CcCCH
Confidence 578888877776655444322 1 11111 123 588999999999999 88888653 37899
Q ss_pred HHHHHHHHHhHhcCCcceEEEeeccCCccccc--cChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCee
Q 010125 235 DSLMAQINSDVEVGLIPLFLCATIGTTAITAV--DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSF 312 (517)
Q Consensus 235 ~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i--dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi 312 (517)
.+++.+|.+.++ ++.-++.++. |.. -+++++++|||+||+.++||+|-|.-.-.-+..+..+. .++|.+
T Consensus 147 ~d~~~AIne~ta------~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDLV 217 (395)
T COG1921 147 KDYELAINENTA------LLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADLV 217 (395)
T ss_pred HHHHHHhccCCe------eEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCEE
Confidence 999999999886 4444443332 322 36788999999999999999976554321222222221 379999
Q ss_pred eeccccccCCCCcceEEEEeCc
Q 010125 313 SLNAHKWFFATLDCCCLWVKDP 334 (517)
Q Consensus 313 ~~~~hK~l~~p~~~g~l~~~~~ 334 (517)
++|++|.|++|. +|++.-|+.
T Consensus 218 ~~SgdKllgGPq-aGii~GkKe 238 (395)
T COG1921 218 SFSGDKLLGGPQ-AGIIVGKKE 238 (395)
T ss_pred EEecchhcCCCc-cceEechHH
Confidence 999999999996 777766544
No 380
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.76 E-value=1.3e-06 Score=82.83 Aligned_cols=323 Identities=12% Similarity=0.138 Sum_probs=200.2
Q ss_pred HHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEe----CCCCchHHHHHHH
Q 010125 135 ENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYG----SDQTHCALQKAAQ 210 (517)
Q Consensus 135 E~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~----s~~~H~s~~kaa~ 210 (517)
.+-+...++.+.|..+. ...+.++ -.+|+..++..- ++. ...+-.|+. -...||+++.-++
T Consensus 113 De~il~l~~~iVGA~e~-------EvavmNs-LTvNlh~Ll~sF---yKP----TekR~KILlE~kaFPSDhYAiesQ~~ 177 (465)
T KOG3846|consen 113 DEPILPLLAPIVGAQEN-------EVAVMNS-LTVNLHSLLISF---YKP----TEKRFKILLEKKAFPSDHYAIESQCK 177 (465)
T ss_pred chhhhhhhhhhccCCch-------hhhhHhh-hhhHHHHHHHHh---cCC----cchhhhhhhccCCCCchHHHHHhhhh
Confidence 34566778888888765 2333332 334554444321 111 001111221 1237999999999
Q ss_pred HcCCCCC-CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccc
Q 010125 211 IVGIDVK-NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 211 ~~G~g~~-~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
+-|+... ..+.|.-.+ +.-.+..+++-+.|++ +|....+|+.+.....||...++.+|...-+..|+++=-|-||
T Consensus 178 lhG~~~e~sm~~iePRE-GEetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAH 253 (465)
T KOG3846|consen 178 LHGISPENSMIQIEPRE-GEETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAH 253 (465)
T ss_pred hcCCChHHheEEecccc-cccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhh
Confidence 9999533 344554433 3347788888777764 4556678888888999999999999996667779999999999
Q ss_pred ccccccCccccccccCCCCCCeeeeccccccCC-CCcceEEEEeCchhHHhhhcCCccccCCccccccccccC-----CC
Q 010125 290 AGSACICPEFRHFIDGVEGADSFSLNAHKWFFA-TLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDY-----KD 363 (517)
Q Consensus 290 g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~-p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~-----~~ 363 (517)
+.+-.+..-+.+ ++|+.+|...|++++ +-|.|.+++-++.. ........+|..+.........+. +-
T Consensus 254 AvgNVpL~LHdW------gVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa 326 (465)
T KOG3846|consen 254 AVGNVPLQLHDW------GVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVLELIPGA 326 (465)
T ss_pred hhcCCceEEeec------CCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhccccccCccc
Confidence 777655432222 899999999999974 45677788765532 122222234443332211111111 11
Q ss_pred ccccCCCC--CCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe-----------EEecCC----CeeEEEE
Q 010125 364 WQITLSRR--FRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRF-----------EIVFPC----HFAVVCF 426 (517)
Q Consensus 364 ~~~~~sr~--~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~-----------~l~~~~----~~~~v~f 426 (517)
.++..|.+ ....++..+++.+.+-.+.+..++.+-++.|+...++...+. .++.|. ....++.
T Consensus 327 ~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl 406 (465)
T KOG3846|consen 327 LGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSL 406 (465)
T ss_pred cccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEE
Confidence 11111111 122466677777777778888999999999998888754332 233221 1223333
Q ss_pred EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 427 RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
.+..+ +..+.+.|.++|.+. .-...+++|++....+++-.||..++.+|.+
T Consensus 407 ~Fssp-------------------------~~~vfqeL~krGv~~----DkR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e 457 (465)
T KOG3846|consen 407 YFSSP-------------------------TPKVFQELHKRGVIG----DKRRPNVIRVAPVPLYNTFSDVYIFVNALNE 457 (465)
T ss_pred EeCCC-------------------------chHHHHHHHHcCeec----cccCCCceEeecchhhccHHHHHHHHHHHHH
Confidence 33222 356677777888754 2233578999998888999999999999999
Q ss_pred HHHHHH
Q 010125 507 HLEAFQ 512 (517)
Q Consensus 507 ~~~~l~ 512 (517)
+...+.
T Consensus 458 ~~d~~e 463 (465)
T KOG3846|consen 458 AMDKLE 463 (465)
T ss_pred HHHHhh
Confidence 987664
No 381
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.75 E-value=4.9e-06 Score=81.92 Aligned_cols=281 Identities=13% Similarity=0.096 Sum_probs=172.0
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHH
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLM 238 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le 238 (517)
..+-|.|||-|+-.+....... .++..|++|+++..-........|+ ++...|.-...+..+|.+.+-
T Consensus 96 ~t~Qt~GGTGAL~~~A~fl~~~---------~~~~~vwis~PtW~NH~~If~~aGl---~v~~Y~Yyd~~~~~~df~~ml 163 (396)
T COG1448 96 ATVQTLGGTGALRVAADFLARF---------FPDATVWISDPTWPNHKAIFEAAGL---EVETYPYYDAETKGLDFDGML 163 (396)
T ss_pred hheecCCcchHHHHHHHHHHHh---------CCCceEEeCCCCcHhHHHHHHhcCC---ceeeeeccccccccccHHHHH
Confidence 4677889998876554333222 1566699999998888888888999 999888744345569999999
Q ss_pred HHHHHhHhcCCcceEEEeeccCCccccc---cChhHHHHHHHHhCCeEEcccccccccccCccccc----cccCCCCCCe
Q 010125 239 AQINSDVEVGLIPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRH----FIDGVEGADS 311 (517)
Q Consensus 239 ~~i~~~~~~g~~p~~vv~t~gtt~~G~i---dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~----~~~g~~~aDs 311 (517)
..|+...+.. +++.-.++.||||.- +..++|+++.++.|+.-.+|=||-|+.--.++-.. ..... .-=.
T Consensus 164 a~L~~a~~~~---vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~-~~~l 239 (396)
T COG1448 164 ADLKTAPEGS---VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG-PELL 239 (396)
T ss_pred HHHHhCCCCC---EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhC-CcEE
Confidence 8888765432 344445578999963 45789999999999999999999887654433221 11111 1136
Q ss_pred eeeccccccCC---CCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCchHHHH------HHH
Q 010125 312 FSLNAHKWFFA---TLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWF------VIR 382 (517)
Q Consensus 312 i~~~~hK~l~~---p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~------~l~ 382 (517)
++.|+.|.++. =.||-.++..+.+...+.++....-++..++. + +....++-+ .|+
T Consensus 240 va~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySn------P---------P~~Ga~vva~IL~~p~Lr 304 (396)
T COG1448 240 VASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSN------P---------PAHGAAVVATILNNPELR 304 (396)
T ss_pred EEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCC------C---------chhhHHHHHHHhCCHHHH
Confidence 78889999852 12333344455554444433322222222110 0 001111111 234
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcC-C--CeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHH
Q 010125 383 NYGVANLRHFLRSHVNMAKLFERLVSGD-K--RFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRE 459 (517)
Q Consensus 383 ~~g~~g~~~~i~~~~~~a~~l~~~l~~~-~--~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (517)
..-.+-+..|.++..++++.|.+.|++. + .|..+ ..+.++++|. +-. .+
T Consensus 305 a~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~GMFsy~--Gls-------------------------~~ 356 (396)
T COG1448 305 AEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFI-ISQRGMFSYT--GLS-------------------------PE 356 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchH-hhcCceeecC--CCC-------------------------HH
Confidence 4445567788889999999999999872 1 35544 3455666654 321 11
Q ss_pred HHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 460 LLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 460 l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
=.++|+++..+|+.. .| |+|+.+ .++..|+.+.++|.++
T Consensus 357 QV~rLree~~IY~v~---sG----Ri~vaG--l~~~ni~~va~ai~~v 395 (396)
T COG1448 357 QVDRLREEFGIYLVA---SG----RINVAG--LNTSNIDYVAKAIAAV 395 (396)
T ss_pred HHHHHHHhccEEEec---CC----eeeecc--CChhhHHHHHHHHHhh
Confidence 123444444455433 22 999854 4566899999888764
No 382
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.70 E-value=4.2e-06 Score=84.76 Aligned_cols=189 Identities=13% Similarity=0.017 Sum_probs=109.3
Q ss_pred HHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH
Q 010125 132 TELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI 211 (517)
Q Consensus 132 ~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~ 211 (517)
+....++.+.|.++++-.. ....|+++||+|+..|+..+|...-.+ +.. ....++-....-|-...-+..+
T Consensus 58 ~~~~~~la~~L~~~~p~~~-------~~v~f~~sGseAve~Alkla~~~~~~~-~~~-~r~~il~~~~~yHG~t~~~~s~ 128 (339)
T PF00202_consen 58 HPEAAELAEKLAELFPGGL-------DRVFFANSGSEAVEAALKLARQYHNKR-AYT-GRRKILAFEGSYHGRTLGALSL 128 (339)
T ss_dssp EHHHHHHHHHHHHHSSTTE-------EEEEEESSHHHHHHHHHHHHHHHHHHT-HHH-TTTEEEEETTTB-TSSHHHHHH
T ss_pred ccchhhhhhhhhhcccccc-------ceeeeccCchHHHHHHHHHhhcccccc-ccc-CCceEEEeeeeeeccCcccccc
Confidence 4445567788888883322 268999999999999999999321111 101 1233444444455333223332
Q ss_pred cC---------CCCCCEEEEecCCCCC---cccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc----ChhHHHHH
Q 010125 212 VG---------IDVKNFRAIKTTKSSS---YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD----PLKPLCDV 275 (517)
Q Consensus 212 ~G---------~g~~~v~~vp~d~~~~---~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id----pl~eI~~i 275 (517)
.+ -....+..+|...... ..-....+++.+.+... ....+|++.-.....|.+- =+++|.++
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~g~~G~~~~~~~~l~~l~~l 206 (339)
T PF00202_consen 129 TGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEIAAVIVEPIQGEGGMIPPPPEYLRELREL 206 (339)
T ss_dssp SSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSBTTTTSBEE-TTHHHHHHHH
T ss_pred cCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcEEEEEEeccccccCccccccchhhehccc
Confidence 21 1123567777652100 00112234444433222 1234566665555556553 27999999
Q ss_pred HHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEEEEeCc
Q 010125 276 AKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCLWVKDP 334 (517)
Q Consensus 276 ~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~ 334 (517)
|++||+.+++|..+.|+.....-+.....++ ..|.+++. |.++..+..|.++++++
T Consensus 207 c~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 207 CREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp HHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred ccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccccccch
Confidence 9999999999999988754332222222334 57999986 99987788999998764
No 383
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.64 E-value=8.7e-06 Score=79.12 Aligned_cols=336 Identities=16% Similarity=0.142 Sum_probs=174.4
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCc
Q 010125 123 FNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTH 202 (517)
Q Consensus 123 ~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H 202 (517)
-.|..|...-.|... +.+.||+.... =.-.+-|.|.++..++.- . +. ..++.+..+.+..|
T Consensus 73 EAYagsrs~~~L~~a----vkdifGfq~~i-------PthQGRgAE~Il~~i~ik--~-----~~-~~pg~~~~~~sN~~ 133 (471)
T COG3033 73 EAYAGSRSYYALADA----VKDIFGFQYTI-------PTHQGRGAENILIPILIK--K-----GE-QEPGSKMVAFSNYH 133 (471)
T ss_pred hhhcccccHHHHHHH----HHHhcCceeee-------eccCCccHHHHHHHHHhh--h-----cc-ccCCccccccccce
Confidence 356666666555544 55666764321 011222445555433321 1 10 11343444455778
Q ss_pred hHHHHH-HHHcCCCCCCEEEEecCCCC--------CcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc---cccChh
Q 010125 203 CALQKA-AQIVGIDVKNFRAIKTTKSS--------SYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT---AVDPLK 270 (517)
Q Consensus 203 ~s~~ka-a~~~G~g~~~v~~vp~d~~~--------~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G---~idpl~ 270 (517)
+-..++ ....|. .++-+++++.. .|.+|++.|++.|++.-. ...|.++.....++..| ++++++
T Consensus 134 FdTTr~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~-~nvp~I~~tiT~NsagGQpVSm~n~r 209 (471)
T COG3033 134 FDTTRGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA-DNVPYIVLTITNNSAGGQPVSMANMK 209 (471)
T ss_pred ecchhHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCc-ccCcEEEEEEeccccCCCcchHHhHH
Confidence 766554 455666 56666654321 368999999999987643 34565444444455555 458899
Q ss_pred HHHHHHHHhCCeEEccccccc-ccccCc----ccccc-c-----cCCCCCCeeeeccccccCCCCcceEEEEeCchhHHh
Q 010125 271 PLCDVAKQFGIWVHVDAAYAG-SACICP----EFRHF-I-----DGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVS 339 (517)
Q Consensus 271 eI~~i~~~~gi~lhvDaA~g~-~~~~~~----~~~~~-~-----~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~ 339 (517)
++.+||++|++.++.|+|.-+ .+.+.. .+++. + .-++.+|-++.|.-|=..++. .|++.++|+..+.-
T Consensus 210 ~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~~~D~~~fDv 288 (471)
T COG3033 210 AVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLCFKDDSFFDV 288 (471)
T ss_pred HHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-ccEEEecCccHHHH
Confidence 999999999999999987532 233332 22221 1 124689999999999998875 57888888853210
Q ss_pred hhcCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 010125 340 SLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPC 419 (517)
Q Consensus 340 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~ 419 (517)
......--+.. .+.+.|+. -.+|... ++...|+.-- -...+++.....+||.+.|.+. |+.++.+.
T Consensus 289 y~~~~~~~V~~-----eG~~tYGg---l~Grdme--alAvGL~e~~---~~~yl~~Rv~Qv~YL~~~l~~~-GVpi~~pa 354 (471)
T COG3033 289 YEECRTLVVVQ-----EGFPTYGG---LAGRDME--ALAVGLREGV---NFDYLAHRVAQVQYLADGLEEA-GVPIVQPA 354 (471)
T ss_pred HHHHHhheEee-----ccccccCc---ccchhHH--HHHHHHHHhc---CcHHHHHHHHHHHHHHHHHHhc-CCeeEecC
Confidence 00000000110 01111110 1122222 2222332210 1234556667788999999887 88777554
Q ss_pred CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeE-------CC------EeEEEEE
Q 010125 420 HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVL-------GG------IYAIRFA 486 (517)
Q Consensus 420 ~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------~g------~~~lR~~ 486 (517)
...- +|.-...-+-. .+.+.--...+..+|+. +.|+-.+....+ .| -..+|+.
T Consensus 355 GGHa-vfvda~~~lph----------ip~eqFpaqala~ely~---e~GiRavElG~~~~~rd~ktg~q~~~~~elvRlt 420 (471)
T COG3033 355 GGHA-VFVDAGKFLPH----------IPAEQFPAQALACELYK---EAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLT 420 (471)
T ss_pred CCce-EEeehhhhcCC----------CChhhCcHHHHHHHHHH---HhCeeeeeeeceecccCCCccccCCCchheeeEe
Confidence 3322 23211100000 00010011233333333 334322211111 11 1469999
Q ss_pred ecCCCCcHHHHHHHHHHHHHHHHH
Q 010125 487 TGATLTEKRHVVVAWTVVQQHLEA 510 (517)
Q Consensus 487 ~~~~~t~~~di~~l~~~l~~~~~~ 510 (517)
+---.-+.+++|.+++.++++.++
T Consensus 421 ipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 421 IPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred ccccccchhHHHHHHHHHHHHHhc
Confidence 843344667999999999887654
No 384
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.63 E-value=2.6e-05 Score=77.10 Aligned_cols=304 Identities=14% Similarity=0.122 Sum_probs=158.6
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHh----cccCCCCeEEEeCCCCchHHHHHHHHc
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKI----GRENISKLIVYGSDQTHCALQKAAQIV 212 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~----g~~~~~~~~v~~s~~~H~s~~kaa~~~ 212 (517)
++++.+++++|.+.+ ..++.+++| -|++--..++.....-. -|...++...+|+.+.|-.....++.+
T Consensus 73 e~r~l~a~llgv~~~-------~viv~gNSS-L~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~ 144 (425)
T PF12897_consen 73 EARELFAELLGVPPE-------NVIVGGNSS-LNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHF 144 (425)
T ss_dssp HHHHHHHHHHTS-GG-------GEEE-SS-H-HHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHC
T ss_pred HHHHHHHHHhCCCHH-------HEEEeccch-HHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhh
Confidence 456789999999986 455544444 34433223322222111 122346778899999999999999999
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHh-cCCcceEEEeeccCCccccccChhHHHHHH----HHhCCeEEccc
Q 010125 213 GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVE-VGLIPLFLCATIGTTAITAVDPLKPLCDVA----KQFGIWVHVDA 287 (517)
Q Consensus 213 G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~-~g~~p~~vv~t~gtt~~G~idpl~eI~~i~----~~~gi~lhvDa 287 (517)
|+ +.+.||.+++ -.|++.+|+.+.++.. +| +-++---+|++|..-.=+-+.+++ ...++.+.-|-
T Consensus 145 Gi---emi~VpM~~d---GPDmD~Ve~LV~~D~svKG----iWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDN 214 (425)
T PF12897_consen 145 GI---EMIPVPMTED---GPDMDMVEELVAEDPSVKG----IWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDN 214 (425)
T ss_dssp T----EEEEEEEETT---EE-HHHHHHHTHTSTTEEE----EEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-
T ss_pred Cc---EEEecCCCCC---CCCHHHHHHHHhcCCccce----EEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeec
Confidence 99 9999999864 4799999999976653 33 445555688999885544444444 35799999999
Q ss_pred ccccccccCcccc----cccc---CCCCCC--eeeeccccccCCCCcceEEEEeCchh--HHhhhcCCccccCCcccccc
Q 010125 288 AYAGSACICPEFR----HFID---GVEGAD--SFSLNAHKWFFATLDCCCLWVKDPRA--LVSSLSTNPEYLKNKATESM 356 (517)
Q Consensus 288 A~g~~~~~~~~~~----~~~~---g~~~aD--si~~~~hK~l~~p~~~g~l~~~~~~~--~~~~~~~~~~yl~~~~~~~~ 356 (517)
||+...+..+..+ ..+. ....-| .+..|.+|.-+...|.+++-...... +.+.++.. -+.
T Consensus 215 AY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~--tIg------- 285 (425)
T PF12897_consen 215 AYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQ--TIG------- 285 (425)
T ss_dssp TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH---S--------
T ss_pred CceEeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCc--eeC-------
Confidence 9988877432211 1111 112333 55667999988877777766544322 11111100 010
Q ss_pred ccccCCCccccCCCCCCchHHHHHHHHhc-HH-HHHHHHHHHHHH--------HHHHHHHHh-cCCCeEEecCCC-eeEE
Q 010125 357 QVVDYKDWQITLSRRFRSLKLWFVIRNYG-VA-NLRHFLRSHVNM--------AKLFERLVS-GDKRFEIVFPCH-FAVV 424 (517)
Q Consensus 357 ~~~~~~~~~~~~sr~~~al~~~~~l~~~g-~~-g~~~~i~~~~~~--------a~~l~~~l~-~~~~~~l~~~~~-~~~v 424 (517)
..-+....-.+.++ .+ |++++++++.+. -+.|.+.|. .. ++--+..|. ..+|
T Consensus 286 ---------------pdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFI 349 (425)
T PF12897_consen 286 ---------------PDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFI 349 (425)
T ss_dssp -----------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-E
T ss_pred ---------------ccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEE
Confidence 11123333344443 45 777777766542 234455555 32 443444554 4577
Q ss_pred EEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEe-eeeE-----CCEeEEEEEecCCCCcHHHHH
Q 010125 425 CFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMT-HAVL-----GGIYAIRFATGATLTEKRHVV 498 (517)
Q Consensus 425 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~-----~g~~~lR~~~~~~~t~~~di~ 498 (517)
+|...+. ..+++.+...+.|+.... +..+ .....||++.+-| +.+|++
T Consensus 350 sld~~~G------------------------~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P--~leel~ 403 (425)
T PF12897_consen 350 SLDVLDG------------------------TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYP--SLEELE 403 (425)
T ss_dssp EEEESTT-------------------------HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS---HHHHH
T ss_pred EEecCCC------------------------hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCC--CHHHHH
Confidence 8887654 246677777778875432 1122 1135799998643 677999
Q ss_pred HHHHHHHHHHH
Q 010125 499 VAWTVVQQHLE 509 (517)
Q Consensus 499 ~l~~~l~~~~~ 509 (517)
.+++.+.-+++
T Consensus 404 ~Am~~~~~cv~ 414 (425)
T PF12897_consen 404 TAMDVFATCVK 414 (425)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988876654
No 385
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.49 E-value=3.8e-06 Score=78.15 Aligned_cols=233 Identities=14% Similarity=0.083 Sum_probs=141.2
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCch-HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTC-EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA 209 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt-~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa 209 (517)
...+-.+.....-++.|+..-. +.++++-+| |+.-..+...|.+. ++ .+.+| -......|-.|..
T Consensus 55 l~~isne~a~~~i~l~glhav~------nc~vvpl~tgmslslc~~s~r~kr-pk------akyii-w~ridqks~~ksi 120 (432)
T KOG3843|consen 55 LACISNEFAKDAIHLAGLHAVA------NCFVVPLATGMSLSLCFLSLRHKR-PK------AKYII-WLRIDQKSCFKSI 120 (432)
T ss_pred HHHHHHHHHHHHHHHhhhhhhh------ceeEEeccccccHHHHHHHHhhcC-Cc------ccEEE-EEecchHHHHHHH
Confidence 3344555666666777775321 334433222 44545556655431 11 23333 3345667777877
Q ss_pred HHcCCCCCCEEEEec-CCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc---cccChhHHHHHHHHhCCeEEc
Q 010125 210 QIVGIDVKNFRAIKT-TKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT---AVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~-d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G---~idpl~eI~~i~~~~gi~lhv 285 (517)
--.|+ +.+.|.. -..+..+.|++++++.|++.-. -++.+.+.||..- .-|.+++|+.||..|++.-+|
T Consensus 121 ~~agf---epiiie~i~d~d~l~tdleav~~~iee~g~-----dcilci~sttscfapr~pd~leaiaaica~~diphiv 192 (432)
T KOG3843|consen 121 IHAGF---EPIIIENILDGDELITDLEAVEAIIEELGE-----DCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIV 192 (432)
T ss_pred HhcCC---CceeeeccccchHHHHhHHHHHHHHHHhCC-----ceEEEEeecccccCCCCCchHHHHHHHHHccCchhhh
Confidence 77888 6666543 2223456799999999887543 2455555454432 348899999999999999999
Q ss_pred ccccccccccCcccccccc---CCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCC
Q 010125 286 DAAYAGSACICPEFRHFID---GVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYK 362 (517)
Q Consensus 286 DaA~g~~~~~~~~~~~~~~---g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 362 (517)
.-|||.- +.+.-+.+. ...++|.++-+.-|.+.+|.|..++..-+..... .+ ...|-...
T Consensus 193 nnayglq---see~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq-~i--ak~ypgra----------- 255 (432)
T KOG3843|consen 193 NNAYGLQ---SEECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQ-EI--AKMYPGRA----------- 255 (432)
T ss_pred ccccccc---hHHHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHH-HH--HHhCCCcc-----------
Confidence 9999653 223222221 2458899999999999999876665321211111 11 11121110
Q ss_pred CccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhc
Q 010125 363 DWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSG 409 (517)
Q Consensus 363 ~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~ 409 (517)
.....+-+...+-.+|..+|.+...+..++--+++..|.+
T Consensus 256 -------sa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 256 -------SASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred -------ccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 0113356777888889999999888888877777777654
No 386
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.26 E-value=7.6e-07 Score=88.14 Aligned_cols=162 Identities=16% Similarity=0.125 Sum_probs=38.0
Q ss_pred HHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC------chHHHHHHH
Q 010125 137 IVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT------HCALQKAAQ 210 (517)
Q Consensus 137 ~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~------H~s~~kaa~ 210 (517)
.+.+.++.+.|.+. ++++++...|++.++.+... | -.|++|.-. .+-+....+
T Consensus 51 ~v~~ll~~ltgAea---------A~VvNnnaAAv~L~l~~la~------~------~EvIvsRGelVeiGgsFRip~vm~ 109 (367)
T PF03841_consen 51 HVEELLCELTGAEA---------ALVVNNNAAAVLLALNTLAK------G------KEVIVSRGELVEIGGSFRIPDVMR 109 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc---------cccccccccccccccccccc------c------cccccccccccccccccccccccc
Confidence 35567788888763 46677656666555443211 1 124445322 223555666
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCc--cccc--cChhHHHHHHHHhCCeEEcc
Q 010125 211 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTA--ITAV--DPLKPLCDVAKQFGIWVHVD 286 (517)
Q Consensus 211 ~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~--~G~i--dpl~eI~~i~~~~gi~lhvD 286 (517)
..|. .++.|-+. .+..+++++++|+++++ ++.-.+.++. .|-. -+++++++++++||+++++|
T Consensus 110 ~sGa---~lvEVGtt----N~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~D 176 (367)
T PF03841_consen 110 QSGA---RLVEVGTT----NRTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVD 176 (367)
T ss_dssp ----------------------------------------------------------------HHHHHHHHHT--EEEE
T ss_pred cccc---cccccccc----ccccccccccccccccc------ccccccccccccccccccccHHHHHHHHhhcCCcEEEE
Confidence 6777 88888764 26789999999999986 4544443333 2321 37999999999999999999
Q ss_pred cccccccccCccc-----cccccCC-CCCCeeeeccccccCCCCcceEEEEeCc
Q 010125 287 AAYAGSACICPEF-----RHFIDGV-EGADSFSLNAHKWFFATLDCCCLWVKDP 334 (517)
Q Consensus 287 aA~g~~~~~~~~~-----~~~~~g~-~~aDsi~~~~hK~l~~p~~~g~l~~~~~ 334 (517)
.+-|... ....+ ......+ .++|.++||+.|.|+.|. +|+++-|..
T Consensus 177 lgsG~l~-dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~ 228 (367)
T PF03841_consen 177 LGSGLLV-DLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKE 228 (367)
T ss_dssp -TTHHHH-HHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEHH
T ss_pred CCCCCCc-CcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHH
Confidence 8654332 11111 1111112 479999999999999986 788887654
No 387
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.14 E-value=0.00027 Score=69.66 Aligned_cols=225 Identities=12% Similarity=0.107 Sum_probs=121.1
Q ss_pred HHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc-------
Q 010125 140 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV------- 212 (517)
Q Consensus 140 ~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~------- 212 (517)
+-+++.||.+..-. ..-| .+||.|+-++|...... ++-.++++..-|-.+++...+.
T Consensus 61 ~iyA~vfgaE~ALV-----Rpq~-vSGTHAi~~~Lfg~Lrp----------GD~ll~~tG~PYDTL~~VIG~~g~~~GSL 124 (403)
T PF06838_consen 61 RIYADVFGAEDALV-----RPQF-VSGTHAIALALFGVLRP----------GDELLSITGKPYDTLEEVIGIRGNGPGSL 124 (403)
T ss_dssp HHHHHHCT-SEEEE-----ETTS--SHHHHHHHHHHHH--T----------T-EEEESSSS--CCHHHHHTSSSSSSSST
T ss_pred HHHHHHhCchhhhh-----cccc-cchHHHHHHHHHhcCCC----------CCeEEEcCCCchhhHHHHhCCCCCCCCCh
Confidence 45788999875410 0112 35788887777665442 3334456666677777766443
Q ss_pred ---CCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeec--cCC--ccccccChhHHHHHHHHh--CCeE
Q 010125 213 ---GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATI--GTT--AITAVDPLKPLCDVAKQF--GIWV 283 (517)
Q Consensus 213 ---G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~--gtt--~~G~idpl~eI~~i~~~~--gi~l 283 (517)
|+ +...||+.+ ++.+|.+.++++|++.++ +|.+.- |.+ +.=.++.|+++++++|+. ++++
T Consensus 125 ~e~Gi---~Y~~v~L~~--dg~~D~~~i~~~~~~~tk------~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~ii 193 (403)
T PF06838_consen 125 KEFGI---KYREVPLTE--DGTIDWEAIKKALKPNTK------MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVII 193 (403)
T ss_dssp GGGT----EEEE--B-T--TSSB-HHHHHHHHHTTEE------EEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEE
T ss_pred HHhCc---eeEEEeecC--CCCcCHHHHHHhhccCce------EEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEE
Confidence 44 678899875 569999999999997665 455443 322 222457788888888876 6899
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCCC-CcceEEEEeCchhHHhh-hcCCccccCCccccccccccC
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFAT-LDCCCLWVKDPRALVSS-LSTNPEYLKNKATESMQVVDY 361 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p-~~~g~l~~~~~~~~~~~-~~~~~~yl~~~~~~~~~~~~~ 361 (517)
.||-|||-+.-..+ ..+. +||.+..|+=|..+.. ..+|..++.+++...++ ....++-+..
T Consensus 194 fVDNCYGEFvE~~E-P~~v-----GADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPGiG~----------- 256 (403)
T PF06838_consen 194 FVDNCYGEFVETQE-PTEV-----GADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPGIGK----------- 256 (403)
T ss_dssp EEE-TTTTTTSSS--GGGG-----T-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TTTGG-----------
T ss_pred EEeCCcceeccccC-cccc-----chhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCcccc-----------
Confidence 99999988764332 1222 8999999999998643 34566666555443322 2223333322
Q ss_pred CCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 010125 362 KDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFP 418 (517)
Q Consensus 362 ~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~ 418 (517)
+++-.+...+.. ++ |.---..++....+-+......++++ ||++.+.
T Consensus 257 -----e~G~t~~~~R~~--~Q--GlFlAP~vV~eAlKgaif~A~~fe~l-G~~v~P~ 303 (403)
T PF06838_consen 257 -----EVGATLGTNRLM--FQ--GLFLAPHVVGEALKGAIFAAALFEKL-GFEVSPK 303 (403)
T ss_dssp -----GSS--TTTHHHH--HH--HHHHHHHHHHHHHHHHHHHHHHHHHT-T-EEES-
T ss_pred -----ccccCcchHHHH--Hh--HHhhchHHHHHHHHHHHHHHHHHHHc-CCcCCCC
Confidence 222222221111 00 11111345556666677777777777 9998753
No 388
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.08 E-value=0.0011 Score=62.91 Aligned_cols=342 Identities=14% Similarity=0.075 Sum_probs=186.2
Q ss_pred eCCCC-CChHHHHHHHHHhccccccccc---cc---ChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHH
Q 010125 99 YFPSS-GSIAGFLGEMLSSGFNIVGFNW---IS---SPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAIL 171 (517)
Q Consensus 99 ~~~~~-~~~~~~~~~~l~~~~n~~~~~~---~~---sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~ 171 (517)
|.+++ ..+.+++-++-...+|-++..- +. |.-...+-......+++|++.|+.+ .-.++.+|||.- +
T Consensus 11 FaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~-----~vlf~QGGGt~q-F 84 (370)
T KOG2790|consen 11 FAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNY-----KVLFLQGGGTGQ-F 84 (370)
T ss_pred cCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCce-----eEEEEeCCCccc-c
Confidence 33443 3444666666666666543322 22 2345556667889999999999986 234556666632 2
Q ss_pred HHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHhHhcCCc
Q 010125 172 CTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYG-LSPDSLMAQINSDVEVGLI 250 (517)
Q Consensus 172 ~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~-~d~~~Le~~i~~~~~~g~~ 250 (517)
.|+.. +-. . ++.+..-+-|++..-+--+...|-++.-. +.+..+..+..-++ -|.+.++... +.
T Consensus 85 aAv~l--NL~-g--lK~g~~AdYiVTGsWS~KA~~EAkk~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~--da----- 149 (370)
T KOG2790|consen 85 AAVPL--NLI-G--LKHGRCADYVVTGSWSAKAAEEAKKYGTP---NIVIPKLKSYTYGKVPDPSTWELNP--DA----- 149 (370)
T ss_pred cccch--hhh-c--cccCCccceEEeccccHHHHHHHHhhCCc---eEEeccccccccCcCCChhhcccCC--Cc-----
Confidence 22211 110 0 01122344566765665666666555444 44444432211012 2444443221 11
Q ss_pred ceEEEeeccCCccccc-cChhHHHHHHHHhCCeEEcccccccccccCccccccccCCCCCCeeeeccccccCCCCcceEE
Q 010125 251 PLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDCCCL 329 (517)
Q Consensus 251 p~~vv~t~gtt~~G~i-dpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~g~l 329 (517)
..|..+...|..|.- +++. +-.-+|..++.|-+- -+.+... .+...+.|...++|..+ |.|..++
T Consensus 150 -~yvyyCaNETVHGVEf~~~P----~~~~~~~vlVaDmSS---nflSrpv-----Dvsk~gvi~aGAQKN~G-~aG~Tvv 215 (370)
T KOG2790|consen 150 -SYVYYCANETVHGVEFDFIP----VNDPKGAVLVADMSS---NFLSRPV-----DVSKFGVIFAGAQKNVG-PAGVTVV 215 (370)
T ss_pred -cEEEEecCceeeceecCCCC----CCCCCCceEEEeccc---chhcCCc-----cchhcceEEeccccccC-ccccEEE
Confidence 278889999999974 4443 223357788888432 1111111 13466788999999986 6788888
Q ss_pred EEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCC-CCchHHHHHHHHh-cHHHHHHHHHHHHHHHHHHHHHH
Q 010125 330 WVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRR-FRSLKLWFVIRNY-GVANLRHFLRSHVNMAKLFERLV 407 (517)
Q Consensus 330 ~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~al~~~~~l~~~-g~~g~~~~i~~~~~~a~~l~~~l 407 (517)
++|+.- +.......|.-+.-.... .+.++-.+-+ |.....-+.++.+ ...|+.++-+...+-++.+++.|
T Consensus 216 ivr~dl-lg~~~~~tP~v~dyk~~~-------~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~i 287 (370)
T KOG2790|consen 216 IVRKDL-LGNALDITPSVLDYKIMD-------KNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAI 287 (370)
T ss_pred EEehhh-hcccccCCccccceeeec-------cccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 888653 222333333222111000 0011111111 2222333344443 23467777777888999999999
Q ss_pred hcCCCeEEec-CC---CeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEE
Q 010125 408 SGDKRFEIVF-PC---HFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAI 483 (517)
Q Consensus 408 ~~~~~~~l~~-~~---~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~l 483 (517)
.+..+|-... +| .--.|+||+.+. ++-.++++.-.+++.+-+. .++..+.+
T Consensus 288 D~s~gfy~cpVe~~~RS~MNV~Fri~~d-----------------------~Le~eFLkeA~~~~mv~LK--GhRSVGGi 342 (370)
T KOG2790|consen 288 DNSNGFYRCPVEPSVRSRMNVPFRIEKD-----------------------ELEAEFLKEAAKEHMVQLK--GHRSVGGI 342 (370)
T ss_pred HhcCCeEEcccchhhhhhcccceeecch-----------------------HHHHHHHHHHHHhhhhccc--cccccccc
Confidence 9887876532 22 234689999754 3445555554445543222 23334568
Q ss_pred EEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 484 RFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 484 R~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
|.|+-| ..+-+++++|++-+++..+
T Consensus 343 RASlYN-Aisv~~~q~L~~~m~~F~k 367 (370)
T KOG2790|consen 343 RASLYN-AISVEEVQKLAAFMKEFQK 367 (370)
T ss_pred hhhhhc-cccHHHHHHHHHHHHHHHH
Confidence 999854 6677899999988887654
No 389
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.05 E-value=0.0039 Score=65.39 Aligned_cols=367 Identities=14% Similarity=0.107 Sum_probs=191.6
Q ss_pred hhhHhhhCCCCCCCCCCCHHHHHHHHHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhc-ccccccccccChhhHH
Q 010125 55 PGYLQKVLPESAPNNPESMETILQDVQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSG-FNIVGFNWISSPAATE 133 (517)
Q Consensus 55 ~~~l~~~~~~~~p~~~~~~~~il~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~~~~~sp~~~~ 133 (517)
|..++...+..+| .|....+.++++......+. -|.+=-=+||+. ...++.++..++..- |-+.-..|..--..-.
T Consensus 85 P~~Ir~~~~l~~~-~~~~E~eml~~l~~ia~kNk-~~ksfIGmGYyn-~~vP~~I~RNilenp~W~TqYTPYQ~EIsQGR 161 (1001)
T KOG2040|consen 85 PKSIRLKRPLKMD-KPLCESEMLQHLEDIASKNK-IWKSFIGMGYYN-THVPAVILRNILENPGWYTQYTPYQAEISQGR 161 (1001)
T ss_pred chhhcccchhcCC-CCcCHHHHHHHHHHHHhhhh-HHHHhhcccccc-ccCcHHHHHHhhhCCcceeccCCCchhhhhhh
Confidence 3344444444443 47888899999998655553 344322245654 344455555555432 2111122322112223
Q ss_pred HHHH--HHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHH--
Q 010125 134 LENI--VMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAA-- 209 (517)
Q Consensus 134 lE~~--v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa-- 209 (517)
||.- ..-.++++.|+|-. +..+..-||.|-..-.++.|.. ++-..+++...|+-....+
T Consensus 162 LEsllNyQTmi~dlTGL~~a-------NASLLDEgTAaaEAm~l~~~~~----------krkk~vvd~~~hpqtlsV~~T 224 (1001)
T KOG2040|consen 162 LESLLNYQTMITDLTGLPMA-------NASLLDEGTAAAEAMALCNRIN----------KRKKFVVDSNCHPQTLSVVKT 224 (1001)
T ss_pred HHHHhhhHHhhhhccCCccc-------chhhhccchhHHHHHHHHHhhc----------ccceEEecCCCCcchhhhhhc
Confidence 3321 23467888898865 4455555665543222333322 2223777889997544333
Q ss_pred --HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccc
Q 010125 210 --QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 287 (517)
Q Consensus 210 --~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDa 287 (517)
.-+|+ .+... |+.. +-.. .....-|++..+.| .|.+.|..++++.+++.|..+++-.
T Consensus 225 Ra~~~~i---~v~~~----------~~~~---~~~s----~~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~vv~at 283 (1001)
T KOG2040|consen 225 RAKGFGI---KVVVS----------DIKE---ADYS----SKDVSGVLVQYPDT-EGSVLDFDELVELAHANGSLVVMAT 283 (1001)
T ss_pred cccccce---eEEec----------CHHH---hhcc----ccceeEEEEEcCCC-CCcccCHHHHHHHhhccCceEEEee
Confidence 23333 32222 1111 1111 11234688888887 4999999999999999998765522
Q ss_pred ccccccccCccccccccCCCCCCeeeeccccccCCCCcc-----eEEEEeCchhHHhhhcCCccccCCccccccccccCC
Q 010125 288 AYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFATLDC-----CCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYK 362 (517)
Q Consensus 288 A~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~p~~~-----g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 362 (517)
-.-+.. ......+ -+||....+.+.++ +|.|- |++.+++. +. ...|+.+.+-..+..+...+
T Consensus 284 DLLaLt-iLrpPge-----fGaDIavGSsQRFG-VPlGYGGPHAaFfAv~~~--l~---R~mPGRiiGvtkD~~gk~a~- 350 (1001)
T KOG2040|consen 284 DLLALT-ILRPPGE-----FGADIAVGSSQRFG-VPLGYGGPHAAFFAVSES--LV---RMMPGRIIGVTKDALGKEAY- 350 (1001)
T ss_pred hhhHHH-ccCChhh-----cCceeeeccccccC-ccccCCCchHHHHHHHHH--HH---hhCCCceEeeeecccccHHH-
Confidence 110111 1111111 28999888888754 56553 34433321 21 22233332111110000000
Q ss_pred Ccccc----CCCC-------CCchHHHHHH-----HHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCeeEEEE
Q 010125 363 DWQIT----LSRR-------FRSLKLWFVI-----RNYGVANLRHFLRSHVNMAKLFERLVSGDKRFEIVFPCHFAVVCF 426 (517)
Q Consensus 363 ~~~~~----~sr~-------~~al~~~~~l-----~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~~~~~~~v~f 426 (517)
..-+| --|| -.|-++.+-+ -+.|.+|++++.++....+-.|...|+.. +-++++.+.+-.+..
T Consensus 351 RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fFDTLkI 429 (1001)
T KOG2040|consen 351 RLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFFDTLKI 429 (1001)
T ss_pred HHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhccccccceEEE
Confidence 00001 1122 1122222221 12499999999999999999999999987 678887777777777
Q ss_pred EecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHH
Q 010125 427 RVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQ 506 (517)
Q Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~ 506 (517)
+.... .++++++-.++++-+ ..+ ....+-+++ -..++++|++.++..+.+
T Consensus 430 ~~~~s-------------------------~~~~l~rA~~~~iNl---r~~-ed~tigvsl-DETv~~~DvddLl~vf~~ 479 (1001)
T KOG2040|consen 430 RCGCS-------------------------AEEVLDRAAKRQINL---RLV-EDGTIGVSL-DETVTEKDVDDLLWVFNE 479 (1001)
T ss_pred EecCc-------------------------HHHHHHHHHhhcCce---EEe-ecCceEEee-cccccHHHHHHHHHHHcc
Confidence 76542 234444444444321 111 123456676 457788899999988863
No 390
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.81 E-value=0.0056 Score=58.89 Aligned_cols=288 Identities=15% Similarity=0.166 Sum_probs=161.5
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHH
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLM 238 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le 238 (517)
.|+-+-|||-|+..+..-.-.. + .+-.||+|.++........+-.|+- .+...|.=..++-.+|.+.+-
T Consensus 101 ~~vQslsGTGAl~~~A~Fl~~~-~--------~~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~e~~L 169 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFLATF-Y--------NKNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDLEGFL 169 (410)
T ss_pred cceeeccccchhhhhHHHHHHh-c--------ccceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecHHHHH
Confidence 5677778887776543322111 1 3456999999988877777888841 444444422235578998888
Q ss_pred HHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhCCeEEcccccccccccCccc-----ccccc-CCCC
Q 010125 239 AQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGSACICPEF-----RHFID-GVEG 308 (517)
Q Consensus 239 ~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~-----~~~~~-g~~~ 308 (517)
..|+...+.. ++|+..+..+|||. || ..+|+++.++.++.-.-|-||-|++---+.. +..+. |++
T Consensus 170 sdl~~APe~s---i~iLhaCAhNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e- 244 (410)
T KOG1412|consen 170 SDLESAPEGS---IIILHACAHNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE- 244 (410)
T ss_pred HHHhhCCCCc---EEeeeccccCCCCC-CCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe-
Confidence 8887765422 23334445888885 66 5689999999999999999998876432221 11111 211
Q ss_pred CCeeeeccccccC--CC-CcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCCCCCCch-HHHH--HHH
Q 010125 309 ADSFSLNAHKWFF--AT-LDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLSRRFRSL-KLWF--VIR 382 (517)
Q Consensus 309 aDsi~~~~hK~l~--~p-~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al-~~~~--~l~ 382 (517)
=+++-++.|.++ .+ .||=-+.++++.......+...--++..... .+.+ + ++.. ++.. .++
T Consensus 245 -~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SN---PPAy-------G--ArIV~kvL~tP~lr 311 (410)
T KOG1412|consen 245 -LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSN---PPAY-------G--ARIVHKVLSTPELR 311 (410)
T ss_pred -EEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCC---Ccch-------h--hHHHHHHhcCHHHH
Confidence 145667888775 22 3344455566543322111111111111000 0000 0 0000 1110 112
Q ss_pred HhcHHHHHHHHHHHHHHHHHHHHHHhcC--CC-eEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHH
Q 010125 383 NYGVANLRHFLRSHVNMAKLFERLVSGD--KR-FEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRE 459 (517)
Q Consensus 383 ~~g~~g~~~~i~~~~~~a~~l~~~l~~~--~~-~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 459 (517)
..-...++.+-.|..+++..|++.|..+ || +.-+ -.+.++++|. +. +..
T Consensus 312 e~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyT--GL-------------------------tp~ 363 (410)
T KOG1412|consen 312 EQWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYT--GL-------------------------TPA 363 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-Hhhccceeec--CC-------------------------CHH
Confidence 2224556778888899999999998764 33 2111 1345565554 22 233
Q ss_pred HHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 460 LLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 460 l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
-.+.|.++..+|+... | |+++++.+ ...++.+..+|.+.++.+.
T Consensus 364 qV~~li~~h~vyLl~~---G----RInisGLN--~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 364 QVDHLIENHKVYLLSD---G----RINISGLN--MKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred HHHHHHHhceEEEecC---C----cEeeeccc--cccHHHHHHHHHHHHHhhc
Confidence 3566777777776542 2 67775432 3378888888888877664
No 391
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=97.75 E-value=0.0074 Score=57.74 Aligned_cols=302 Identities=11% Similarity=0.040 Sum_probs=163.9
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHc------CCCCCC---EEEEecCC--C
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIV------GIDVKN---FRAIKTTK--S 227 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~------G~g~~~---v~~vp~d~--~ 227 (517)
..+|+++|||||-.||..||+.. + ..++|.+....|--+....++. |-|..+ |..-|+.. .
T Consensus 104 vc~F~NSGSEANDLALRLAR~ft-k-------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyr 175 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFT-K-------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYR 175 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhc-c-------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccc
Confidence 57999999999999999999852 1 3455555433332222222211 222223 23333310 0
Q ss_pred CC-----------cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC----hhHHHHHHHHhCCeEEcccccccc
Q 010125 228 SS-----------YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP----LKPLCDVAKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 228 ~~-----------~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp----l~eI~~i~~~~gi~lhvDaA~g~~ 292 (517)
+. +..-.+.+++.+++...+|......++.+-.+.-|.|-| ++++++..+.+|-.++.|..+-|+
T Consensus 176 GK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGF 255 (452)
T KOG1403|consen 176 GKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGF 255 (452)
T ss_pred cccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcc
Confidence 11 223456788888887777766666666666666777755 678899999999999999999887
Q ss_pred cccCcccccc-ccCCCCCCeeeeccccccCCCCcceEEEEeCchhHHhhhcC-CccccCCccccccccccCCCccccCCC
Q 010125 293 ACICPEFRHF-IDGVEGADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLST-NPEYLKNKATESMQVVDYKDWQITLSR 370 (517)
Q Consensus 293 ~~~~~~~~~~-~~g~~~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 370 (517)
......+-.. +-++ -.|.+++ -|-++...+.+++.++.+ +.++|.. ...|+..- ++.
T Consensus 256 GRvG~hyWafq~y~f-iPDIVtm--gKpmGNGhPVa~Vattke--IA~Af~atgv~YFNTy----------------GGn 314 (452)
T KOG1403|consen 256 GRVGSHYWAFQTYNF-IPDIVTM--GKPMGNGHPVAAVATTKE--IAQAFHATGVEYFNTY----------------GGN 314 (452)
T ss_pred cccchhhhhhhhhcc-ccchhee--cccCCCCCeeeEEeccHH--HHHHhccccceehhcc----------------CCC
Confidence 6544332111 1111 3455554 465655566777766543 3456644 44555321 222
Q ss_pred CCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCCCe-e-EEEEEecCCCcchhhhhhhhhcccc
Q 010125 371 RFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDK-RFEIVFPCHF-A-VVCFRVSPSPVLMDKLKTKYVNCLL 447 (517)
Q Consensus 371 ~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~-~~~l~~~~~~-~-~v~f~~~~~~~~~~~~~~~~~~~~~ 447 (517)
+-......+.|+....+.+ .++...+.++|...|++.. ..+++..... + ++-..+..... +.++
T Consensus 315 PVsCAv~laVm~v~e~E~L---q~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~----------tRtP 381 (452)
T KOG1403|consen 315 PVSCAVGLAVMRVCEDENL---QEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRK----------TRTP 381 (452)
T ss_pred chhHHHHHHHHHHHhhhhH---HHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccc----------cCCC
Confidence 2222333445555544444 4555667777777775532 3566655331 1 12222222210 0011
Q ss_pred chHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 448 SEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 448 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
+ .+....+..+|.+...+.++... .+++.+.+-.- .-.+++++++.+..|.++.-
T Consensus 382 -~----tk~A~~~v~rlke~y~VLlsaDG-Ph~NilKiKPP-mCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 382 -D----TKEAHWVVNRLKELYRVLLSADG-PHRNILKIKPP-MCFNEENADEFVLGLDEILT 436 (452)
T ss_pred -c----HHHHHHHHHHHHHhhhEEEecCC-CCCceeecCCC-cccChhhHHHHHHHHHHHHH
Confidence 1 23345666677766655555432 23556776541 12356677777777776653
No 392
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.13 E-value=0.024 Score=55.57 Aligned_cols=219 Identities=15% Similarity=0.128 Sum_probs=116.7
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCCcc----ccccChhHHHHHHHHhCCeEEcccccccccccCccccccccCC-C
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTTAI----TAVDPLKPLCDVAKQFGIWVHVDAAYAGSACICPEFRHFIDGV-E 307 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~----G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~~~~~~~g~-~ 307 (517)
.++.+|+.|.+..++......+++.--.+.- +.-|-+..+.+||+|||+-++||..+-|+.....-+.+---++ .
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 5778888888876554444445544433333 3446689999999999999999999877654443332221222 2
Q ss_pred CCCeeeeccccccCCCCcceEEEEeCchhHHhhhcCCccc-cCCccccccccccCCCccccCCCCCCchHHHHHHHHhcH
Q 010125 308 GADSFSLNAHKWFFATLDCCCLWVKDPRALVSSLSTNPEY-LKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGV 386 (517)
Q Consensus 308 ~aDsi~~~~hK~l~~p~~~g~l~~~~~~~~~~~~~~~~~y-l~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~ 386 (517)
-.|.+||+ |=+.. .|++ - +. .|....+| +++. | ++-+++.+-+-..++.+..
T Consensus 334 PpD~vTFS--KK~q~---gGff-h-~~-----~frpn~pYrifNT------------W---mGdP~k~lll~~vv~~I~~ 386 (484)
T KOG1405|consen 334 PPDVVTFS--KKFQT---GGFF-H-DE-----EFRPNEPYRIFNT------------W---MGDPSKNLLLEEVVQEIKR 386 (484)
T ss_pred Cccceehh--hhhhc---Cccc-c-Cc-----ccCCCchHHHhhh------------h---cCChHHHHHHHHHHHHHhH
Confidence 47777765 33322 2322 1 11 12222223 1111 1 1222233433444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHH
Q 010125 387 ANLRHFLRSHVNMAKLFERLVSG----DKRFEIVFPCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLE 462 (517)
Q Consensus 387 ~g~~~~i~~~~~~a~~l~~~l~~----~~~~~l~~~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 462 (517)
++ +++......++|..+|.+ .|+.---..-...++.|..... ....++..
T Consensus 387 ~~---Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~-----------------------~~Rdk~i~ 440 (484)
T KOG1405|consen 387 ED---LLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSG-----------------------SIRDKLIL 440 (484)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCCh-----------------------HHHHHHHH
Confidence 43 444555566666666643 3442100012334445554332 34456677
Q ss_pred HHHhcCcEEEeeeeECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHH
Q 010125 463 SINASGKAYMTHAVLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLE 509 (517)
Q Consensus 463 ~l~~~g~~~~~~~~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~ 509 (517)
.+..+|... .+ -|...+|+-.+ ..-++.+.+-+++.+.++..
T Consensus 441 ~~~~nGv~~-GG---Cg~~siRfRPs-Lvf~~~Ha~i~l~~~~k~l~ 482 (484)
T KOG1405|consen 441 IARLNGVNL-GG---CGDKSIRFRPS-LVFRKHHADIFLDIFDKILA 482 (484)
T ss_pred HHHHcCcee-cc---cccceeeeccc-eeehhhhHHHHHHHHHHHhc
Confidence 777777643 22 23445666653 23466689999988887764
No 393
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.10 E-value=0.018 Score=56.60 Aligned_cols=295 Identities=15% Similarity=0.084 Sum_probs=140.9
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQ 210 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~ 210 (517)
..+||+. ++.|-++.|--... .--++|..|+|+-...|+.+. ... .....+...|+.+.+-+.++.....
T Consensus 45 s~eL~~~-Ir~LH~~VGNAvt~----gr~IV~GtGsTQL~~AalyAL-Sp~----~~~~~~p~~VVa~aPYY~~Y~~qt~ 114 (363)
T PF04864_consen 45 SPELERQ-IRRLHRVVGNAVTD----GRYIVFGTGSTQLFNAALYAL-SPN----ASPSSSPASVVAAAPYYSSYPEQTD 114 (363)
T ss_dssp -HHHHHH-HHHHHHHH-SB--T----TSEEEEECHHHHHHHHHHHHH-CHH----T-TTSSSEEEEE-SS--CHHHHHCC
T ss_pred cHHHHHH-HHHHHHHhcccccc----CcEEEEcCCHHHHHHHHHHhc-CCC----CCCCCCCceeEecCCCccchHHHHH
Confidence 4566655 45566667643221 014666666666554444332 221 1111244556555555555555555
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccc
Q 010125 211 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 290 (517)
Q Consensus 211 ~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g 290 (517)
++.- ......-|.. .+. .. ....+++=++|.|+||.|.+-. .+++.-+..++.|-||-
T Consensus 115 ~f~s---~~y~w~Gda~-~~~----------~~---~~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AYY 172 (363)
T PF04864_consen 115 FFDS---RLYKWAGDAS-NFK----------NS---DNPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAYY 172 (363)
T ss_dssp CT-B---TTEEEEEECC-CGT----------T----S-CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT-
T ss_pred hccc---cCccccccHH-hhc----------cC---CCCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeeee
Confidence 5544 3333433321 221 11 1134678899999999997632 12344456778998886
Q ss_pred cccccCccccccccCCCCCCeeeeccccccC-CCCcceEEEEeCchhHHhhhcCCccccCCccccccccccCCCccccCC
Q 010125 291 GSACICPEFRHFIDGVEGADSFSLNAHKWFF-ATLDCCCLWVKDPRALVSSLSTNPEYLKNKATESMQVVDYKDWQITLS 369 (517)
Q Consensus 291 ~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~-~p~~~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 369 (517)
...+. .. ..-..-|.+-|+..|.=+ +.-..|..++||++...+.. .|+... ++..|
T Consensus 173 WPhyT-----pI-~~~aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM~----~y~~ln-------------TiGvS 229 (363)
T PF04864_consen 173 WPHYT-----PI-TAPADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKMT----KYMELN-------------TIGVS 229 (363)
T ss_dssp STTTS---------S-B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHHH----HHHHHH-------------CSS--
T ss_pred ccccc-----cc-CCCCCCceEEEEEecccCccccccceeeecCHHHHHHHH----HHHHHh-------------cccCc
Confidence 55431 11 111256899999999764 66779999999998765432 344321 23333
Q ss_pred CC--CCchHHHHHHHH-hcHH-----HHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCee------------EEEEEe
Q 010125 370 RR--FRSLKLWFVIRN-YGVA-----NLRHFLRSHVNMAKLFERLVSGDKRFEIVF-PCHFA------------VVCFRV 428 (517)
Q Consensus 370 r~--~~al~~~~~l~~-~g~~-----g~~~~i~~~~~~a~~l~~~l~~~~~~~l~~-~~~~~------------~v~f~~ 428 (517)
|- .+++++..++-. ++.+ -+.--.+...++=+.|++.+.+...|.+.. +|+.+ .-..+.
T Consensus 230 ~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkC 309 (363)
T PF04864_consen 230 RDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKC 309 (363)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEec
Confidence 32 355665544322 2221 122122333444556777777776787643 22211 112222
Q ss_pred cCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeEC-CEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 429 SPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLG-GIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
... + ++.+. +.|.+.|++--++..++ +..++|+|+.. +++|.+.+++.|..+
T Consensus 310 e~e-----------------e----d~DC~---~~l~~~~I~tr~G~~fga~~ryVRlSml~---~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 310 ERE-----------------E----DEDCY---AVLREAKIITRSGVLFGADSRYVRLSMLK---RDDDFDQLLERLSKL 362 (363)
T ss_dssp SSC-----------------G----GSSHH---HHHHCTTEEEEEGGGGTS-TTEEEEESSS----HHHHHHHHHHHHCC
T ss_pred CCc-----------------c----cccHH---HHHHhCCcccCCCCccCCCCCeEEEeccC---CHHHHHHHHHHHHhh
Confidence 211 1 12223 33445565554444443 35799999854 677999999988753
No 394
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=96.99 E-value=0.019 Score=55.05 Aligned_cols=150 Identities=17% Similarity=0.193 Sum_probs=94.5
Q ss_pred HHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHH--------
Q 010125 140 DWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQI-------- 211 (517)
Q Consensus 140 ~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~-------- 211 (517)
+-+++.||.+.... .--|. +||.|+-+||-..... ++-.+++....+-..+....+
T Consensus 72 ~vyA~vf~aE~a~V-----Rpq~i-sGTHAI~~aLfg~LRp----------gDell~i~G~PYDTLeevIG~rg~~~gSL 135 (416)
T COG4100 72 RVYAQVFGAEAALV-----RPQII-SGTHAIACALFGILRP----------GDELLYITGSPYDTLEEVIGLRGEGQGSL 135 (416)
T ss_pred HHHHHHhcccccee-----eeeee-cchhHHHHHHHhccCC----------CCeEEEecCCcchhHHHHhccCCCCcccH
Confidence 34677888765431 12233 4688877766544321 333455555566666655433
Q ss_pred --cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeec--c--CCccccccChhHHHHHHHHh--CCeE
Q 010125 212 --VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATI--G--TTAITAVDPLKPLCDVAKQF--GIWV 283 (517)
Q Consensus 212 --~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~--g--tt~~G~idpl~eI~~i~~~~--gi~l 283 (517)
.|+ ..+-||+.. +|++|.+.++.+|++.++ +|.+.- | .-+.=.+++|+++..+.|+- |+.+
T Consensus 136 ~dfgi---~Y~~v~Lt~--~gkiD~~~v~~~i~~~tk------li~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~iv 204 (416)
T COG4100 136 KDFGI---KYKAVPLTA--DGKIDIQAVKTAISDRTK------LIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIV 204 (416)
T ss_pred HHhCc---ceeeccccc--CCcccHHHHHHhcCccce------EEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEE
Confidence 344 567788875 569999999999998875 333322 2 22333567788888888875 6888
Q ss_pred EcccccccccccCccccccccCCCCCCeeeeccccccCC
Q 010125 284 HVDAAYAGSACICPEFRHFIDGVEGADSFSLNAHKWFFA 322 (517)
Q Consensus 284 hvDaA~g~~~~~~~~~~~~~~g~~~aDsi~~~~hK~l~~ 322 (517)
.||-|||-+.--. +..+ -++|.+..|.-|.-+.
T Consensus 205 FVDNCYGEFvE~~-EPt~-----vGaDliAGSLIKNpGG 237 (416)
T COG4100 205 FVDNCYGEFVEEK-EPTH-----VGADLIAGSLIKNPGG 237 (416)
T ss_pred EEeccchhhhhcc-Cccc-----cchhhhccceeeCCCC
Confidence 9999998776322 1111 1789999988886543
No 395
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=93.84 E-value=0.42 Score=47.11 Aligned_cols=259 Identities=14% Similarity=0.149 Sum_probs=138.7
Q ss_pred CCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc---cc
Q 010125 191 SKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA---VD 267 (517)
Q Consensus 191 ~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~---id 267 (517)
+.-.||++.++.--..+.-...|+ .+..+.--...+..+|.+.+-+.+.+... | -++++--+..++||. .+
T Consensus 145 ~~~~I~ip~PTWgNh~~if~~ag~---~~~~yrYyd~~t~gld~~g~ledl~~~p~-g--s~ilLhaCaHNPTGvDPt~e 218 (427)
T KOG1411|consen 145 PSRDIYIPDPTWGNHKNIFKDAGL---PVKFYRYYDPKTRGLDFKGMLEDLGEAPE-G--SIILLHACAHNPTGVDPTKE 218 (427)
T ss_pred cccceeecCCcccccCccccccCc---ceeeeeeccccccccchHHHHHHHhcCCC-C--cEEEeehhhcCCCCCCccHH
Confidence 445689999987666666677788 55444332223567888887777765543 2 234444456888884 23
Q ss_pred ChhHHHHHHHHhCCeEEcccccccccccCcc-----ccccccCCCCCC-eeeeccccccCC-CCcceE--EEEeCchhHH
Q 010125 268 PLKPLCDVAKQFGIWVHVDAAYAGSACICPE-----FRHFIDGVEGAD-SFSLNAHKWFFA-TLDCCC--LWVKDPRALV 338 (517)
Q Consensus 268 pl~eI~~i~~~~gi~lhvDaA~g~~~~~~~~-----~~~~~~g~~~aD-si~~~~hK~l~~-p~~~g~--l~~~~~~~~~ 338 (517)
..++|.++.++.+..-..|-||-|++.-... .+..+. .+-+ .++-++-|.++. .-..|. +++++.+...
T Consensus 219 qw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~--~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~ 296 (427)
T KOG1411|consen 219 QWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE--DGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAK 296 (427)
T ss_pred HHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH--cCCceEeehhhhhhcchhhhccceeEEEecCHHHHH
Confidence 4788999999999999999999887643211 111111 0111 355566676642 112333 4555554322
Q ss_pred hhh-----cCCccccCCccccccccccCCCccccCCCCCCchHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Q 010125 339 SSL-----STNPEYLKNKATESMQVVDYKDWQITLSRRFRSLKLWFVIRNYGVANLRHFLRSHVNMAKLFERLVSGDKRF 413 (517)
Q Consensus 339 ~~~-----~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~al~~~~~l~~~g~~g~~~~i~~~~~~a~~l~~~l~~~~~~ 413 (517)
+.- -..+-|.... +.+.|-...+---..|+.--..-...+.+|.+.+++.|.+.|++. +-
T Consensus 297 rV~SQlk~liRpmYSnPP--------------~hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~-gs 361 (427)
T KOG1411|consen 297 RVESQLKILIRPMYSNPP--------------LHGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKE-GS 361 (427)
T ss_pred HHHHHHHHHhcccccCCC--------------ccchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC-CC
Confidence 211 1122222110 111111000000001111112334567888999999999999874 32
Q ss_pred EE-ec--CCCeeEEEEEecCCCcchhhhhhhhhccccchHHHHHHHHHHHHHHHHhcCcEEEeeeeECCEeEEEEEecCC
Q 010125 414 EI-VF--PCHFAVVCFRVSPSPVLMDKLKTKYVNCLLSEEEQINEFNRELLESINASGKAYMTHAVLGGIYAIRFATGAT 490 (517)
Q Consensus 414 ~l-~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~g~~~lR~~~~~~ 490 (517)
.. .. -.+.+++||.-..+ +-.+.|..+..+|++. +| |+|+.+.
T Consensus 362 ~~~W~hI~~QIGMF~fTgl~p---------------------------eQv~~l~ke~~iYmT~---dG----RiS~aG~ 407 (427)
T KOG1411|consen 362 PGNWSHITKQIGMFCFTGLNP---------------------------EQVDWLTKEYHIYLTK---DG----RISMAGL 407 (427)
T ss_pred CccHHHHHHhhheeeecCCCH---------------------------HHHHHHHhhheeeecc---Cc----eEeeccc
Confidence 11 00 24567888865432 2234455556666654 22 7787543
Q ss_pred CCcHHHHHHHHHHHHHHH
Q 010125 491 LTEKRHVVVAWTVVQQHL 508 (517)
Q Consensus 491 ~t~~~di~~l~~~l~~~~ 508 (517)
. + ..+..+.++|.++.
T Consensus 408 s-s-~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 408 S-S-SNVPYLADAIHAVT 423 (427)
T ss_pred c-c-cCCcccchhhHhHh
Confidence 2 2 36677777766654
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=92.90 E-value=0.22 Score=44.07 Aligned_cols=63 Identities=5% Similarity=-0.023 Sum_probs=46.2
Q ss_pred cccChhhHHHHHHHHHHHHHHcC--CCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCc
Q 010125 125 WISSPAATELENIVMDWLGQMLK--LPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTH 202 (517)
Q Consensus 125 ~~~sp~~~~lE~~v~~~l~~l~g--~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H 202 (517)
|....+..++.+++++|+.+.+| .+-. ...+++|+|++.|+..++.+..+ +++.|++..+.|
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~-----pd~Ivvt~Ga~~al~~l~~~l~d-----------pGD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFD-----ADMIVLSAGATAANEIIMFCIAD-----------PGDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccc-----hhheEEcCCHHHHHHHHHHHHcC-----------CCCEEEEeCCCC
Confidence 44555778899999999999988 3211 12789999999998776666543 667788877766
Q ss_pred h
Q 010125 203 C 203 (517)
Q Consensus 203 ~ 203 (517)
.
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 4
No 397
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=75.53 E-value=17 Score=31.91 Aligned_cols=95 Identities=13% Similarity=0.224 Sum_probs=61.9
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc--ChhHHHHHHHH-hCCe------EEccccc
Q 010125 219 FRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD--PLKPLCDVAKQ-FGIW------VHVDAAY 289 (517)
Q Consensus 219 v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id--pl~eI~~i~~~-~gi~------lhvDaA~ 289 (517)
+..|-+-..-.++--.+.||.+.++-..+| ++|+-.+.+..|.-. +-+||.++|+. ||+- ++|-|..
T Consensus 28 lLIVNtASkCGfTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~VnG~~ 103 (162)
T COG0386 28 LLIVNTASKCGFTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDVNGKN 103 (162)
T ss_pred EEEEEcccccCCcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEeecCCC
Confidence 333444332345567789999999888888 688888888888654 48999999984 7863 3565543
Q ss_pred ccccccCcccccc---ccCCCCCCeeeeccccccCC
Q 010125 290 AGSACICPEFRHF---IDGVEGADSFSLNAHKWFFA 322 (517)
Q Consensus 290 g~~~~~~~~~~~~---~~g~~~aDsi~~~~hK~l~~ 322 (517)
+... ++.+ ..|......|-||++|+|--
T Consensus 104 a~PL-----y~~L~~~~~g~~~~~~IkWNFtKFLvd 134 (162)
T COG0386 104 AHPL-----YKYLKEQKPGKLGGKDIKWNFTKFLVD 134 (162)
T ss_pred CCcH-----HHHHHhcCCCCccCCccceeeEEEEEc
Confidence 2222 2222 12223467899999998843
No 398
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=72.74 E-value=8.9 Score=35.14 Aligned_cols=52 Identities=10% Similarity=-0.036 Sum_probs=41.7
Q ss_pred HHHHHHHHHhH-h-cCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcc
Q 010125 235 DSLMAQINSDV-E-VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVD 286 (517)
Q Consensus 235 ~~Le~~i~~~~-~-~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvD 286 (517)
++|..+++.-. + ....-++|++|-|++..|.++|++.-+++++++|+.+|.=
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytI 148 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVI 148 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEE
Confidence 88888887654 2 2223478899999998999999998899999999999763
No 399
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=71.07 E-value=28 Score=31.89 Aligned_cols=69 Identities=10% Similarity=0.132 Sum_probs=43.4
Q ss_pred HHHHHHHHc-CCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc--cChhHHHHHHHHhC
Q 010125 204 ALQKAAQIV-GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV--DPLKPLCDVAKQFG 280 (517)
Q Consensus 204 s~~kaa~~~-G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i--dpl~eI~~i~~~~g 280 (517)
+++.|+.++ .+|...+.++|.. |.-..++|+..-+...++|. .+ -|||-| |++++|.++|.+.|
T Consensus 136 ~vetAiaml~dmG~~SiKffPm~----Gl~~leE~~avAkA~a~~g~---~l------EPTGGIdl~N~~~I~~i~l~aG 202 (218)
T PF07071_consen 136 PVETAIAMLKDMGGSSIKFFPMG----GLKHLEELKAVAKACARNGF---TL------EPTGGIDLDNFEEIVKICLDAG 202 (218)
T ss_dssp EHHHHHHHHHHTT--EEEE---T----TTTTHHHHHHHHHHHHHCT----EE------EEBSS--TTTHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc---ee------CCcCCcCHHHHHHHHHHHHHcC
Confidence 466665544 4666689999984 35578899888888877772 22 267766 68999999999999
Q ss_pred CeEEc
Q 010125 281 IWVHV 285 (517)
Q Consensus 281 i~lhv 285 (517)
+..++
T Consensus 203 v~~vi 207 (218)
T PF07071_consen 203 VEKVI 207 (218)
T ss_dssp -S-B-
T ss_pred CCeec
Confidence 76644
No 400
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=59.77 E-value=1.2e+02 Score=28.50 Aligned_cols=67 Identities=15% Similarity=0.171 Sum_probs=38.3
Q ss_pred hHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc---cChhHHHHHHHHh
Q 010125 203 CALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV---DPLKPLCDVAKQF 279 (517)
Q Consensus 203 ~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i---dpl~eI~~i~~~~ 279 (517)
....+.|+.+|+ .++.++++.. .....+.|.+++.+..++|. ..++ +|++ ++-..+-++|.+.
T Consensus 46 ~~~~~~A~~lgi---p~~~i~~~~~--~~~~~~~l~~~l~~~~~~g~-~~vv--------~G~i~sd~~~~~~e~v~~~~ 111 (218)
T TIGR03679 46 ELTRLQAEALGI---PLVKIETSGE--KEKEVEDLKGALKELKREGV-EGIV--------TGAIASRYQKSRIERICEEL 111 (218)
T ss_pred HHHHHHHHHhCC---CEEEEECCCC--ChHHHHHHHHHHHHHHHcCC-CEEE--------ECCcccHhHHHHHHHHHHhC
Confidence 345677888999 8888877521 12345567777766555442 1121 2333 2344555777777
Q ss_pred CCeE
Q 010125 280 GIWV 283 (517)
Q Consensus 280 gi~l 283 (517)
|+.+
T Consensus 112 gl~~ 115 (218)
T TIGR03679 112 GLKV 115 (218)
T ss_pred CCeE
Confidence 7655
No 401
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=58.84 E-value=2.1e+02 Score=28.95 Aligned_cols=104 Identities=12% Similarity=0.068 Sum_probs=57.2
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCch------HHHHHHHHcCCCCCCEEEEecCCCCCccc
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHC------ALQKAAQIVGIDVKNFRAIKTTKSSSYGL 232 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~------s~~kaa~~~G~g~~~v~~vp~d~~~~~~~ 232 (517)
.++-.|||-.+..++..+.... |. ....|-++ .... -+.+.++.+|+ ....+.++
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~-----gl---~~l~vt~~-~~~~~e~~~~n~~~~~~~lgv---d~~~i~~d------- 122 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKL-----GL---NPLLVTVD-PGWNTELGVKNLNNLIKKLGF---DLHTITIN------- 122 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHh-----CC---ceEEEEEC-CCCCCHHHHHHHHHHHHHcCC---CeEEEeCC-------
Confidence 5788899988876653333221 21 22223333 2222 25566677888 77777553
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccc
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAG 291 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~ 291 (517)
++.+.+.+....+....|... +..-....+.++|+++|+.+++.|..+.
T Consensus 123 -~~~~~~l~~~~~~~~~~pc~~---------c~~~~~~~l~~~A~~~gi~~Il~G~~~d 171 (343)
T TIGR03573 123 -PETFRKLQRAYFKKVGDPEWP---------QDHAIFASVYQVALKFNIPLIIWGENIA 171 (343)
T ss_pred -HHHHHHHHHHHHhccCCCchh---------hhhHHHHHHHHHHHHhCCCEEEeCCCHH
Confidence 444444443333222222211 1122356788999999999999886533
No 402
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=57.76 E-value=37 Score=30.64 Aligned_cols=69 Identities=17% Similarity=0.299 Sum_probs=44.1
Q ss_pred CeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhH
Q 010125 192 KLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKP 271 (517)
Q Consensus 192 ~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~e 271 (517)
+..++..............++|+ ++...+.+ +.++++..|.+..+.|.. +|+... -
T Consensus 79 ~Iavv~~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~~~~~G~~--viVGg~------------~ 134 (176)
T PF06506_consen 79 KIAVVGYPNIIPGLESIEELLGV---DIKIYPYD-------SEEEIEAAIKQAKAEGVD--VIVGGG------------V 134 (176)
T ss_dssp EEEEEEESS-SCCHHHHHHHHT----EEEEEEES-------SHHHHHHHHHHHHHTT----EEEESH------------H
T ss_pred cEEEEecccccHHHHHHHHHhCC---ceEEEEEC-------CHHHHHHHHHHHHHcCCc--EEECCH------------H
Confidence 33344444444557888899999 99988875 577888888887777622 233221 1
Q ss_pred HHHHHHHhCCeEE
Q 010125 272 LCDVAKQFGIWVH 284 (517)
Q Consensus 272 I~~i~~~~gi~lh 284 (517)
+.++|+++|+..+
T Consensus 135 ~~~~A~~~gl~~v 147 (176)
T PF06506_consen 135 VCRLARKLGLPGV 147 (176)
T ss_dssp HHHHHHHTTSEEE
T ss_pred HHHHHHHcCCcEE
Confidence 3688999998654
No 403
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=56.45 E-value=1.3e+02 Score=29.65 Aligned_cols=137 Identities=17% Similarity=0.140 Sum_probs=75.9
Q ss_pred hhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC--chH--
Q 010125 129 PAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT--HCA-- 204 (517)
Q Consensus 129 p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~--H~s-- 204 (517)
--...||.-+-+.+.+ + ..-++|-||.++|.....+|-.+ +.|++ .+.++-... +..
T Consensus 47 NK~RKLefll~eal~~------g------~dTlvT~GgiQSNh~r~tAavA~---~lGl~----~v~ile~~~~~y~~ng 107 (323)
T COG2515 47 NKIRKLEFLLGEALRK------G------ADTLVTYGGIQSNHVRQTAAVAA---KLGLK----CVLILENIEANYLLNG 107 (323)
T ss_pred cHHHHHHHHHhhhhhc------C------CcEEEEecccchhHHHHHHHHHH---hcCCc----EEEEEecccccccccc
Confidence 3456677655555444 1 14689999999998665554332 23432 333333222 100
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc---ccChhHHHHHHHH-hC
Q 010125 205 LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA---VDPLKPLCDVAKQ-FG 280 (517)
Q Consensus 205 ~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~---idpl~eI~~i~~~-~g 280 (517)
..--.+.+|. .++.++... +..++ ..+++..++.+++|.+|+ |+...|.++.|. +.=..||.+-|++ ..
T Consensus 108 n~Ll~~l~G~---~~~~~~~~~--d~~~~-~~~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~ 180 (323)
T COG2515 108 NLLLSKLMGA---EVRAVDAGT--DIGIN-ASAEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQLLK 180 (323)
T ss_pred chhhhhhcCc---eEEEecCCC--Chhhc-hhhHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhhccC
Confidence 1223467788 888887542 23222 234445555566788886 555566788555 4556677777776 34
Q ss_pred CeEEccccccc
Q 010125 281 IWVHVDAAYAG 291 (517)
Q Consensus 281 i~lhvDaA~g~ 291 (517)
+-.+|.++=++
T Consensus 181 fD~vVva~gs~ 191 (323)
T COG2515 181 FDSVVVAPGSG 191 (323)
T ss_pred CCEEEEeCCCc
Confidence 44456554333
No 404
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=52.80 E-value=32 Score=31.60 Aligned_cols=48 Identities=23% Similarity=0.169 Sum_probs=38.2
Q ss_pred HHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 236 SLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 236 ~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
.=|..+.-.+-+|..|..|++..-+ ..|..-..+++.++|++||+.++
T Consensus 142 HTEasVdLarlAGl~Pa~VicEi~~-~dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 142 HTEAAVDLARLAGLKPAGVICEIMN-DDGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred hHHHHHHHHHHcCCCCcEEEEEEeC-CCccccChHHHHHHHHHcCCcEE
Confidence 4455565556689999888777755 48999999999999999999875
No 405
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=49.85 E-value=64 Score=27.11 Aligned_cols=77 Identities=17% Similarity=0.200 Sum_probs=47.8
Q ss_pred CCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc---c-----cCh
Q 010125 198 SDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA---V-----DPL 269 (517)
Q Consensus 198 s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~---i-----dpl 269 (517)
+++...++..+++.+|+ ....||+.. +.++.++++..-+.-.+ -..|.+..+-.|+-.+-. . -+-
T Consensus 43 ~QP~~~~i~~aa~~aGl---~y~~iPV~~---~~iT~~dV~~f~~Al~e-aegPVlayCrsGtRs~~ly~~~~~~~gm~~ 115 (130)
T COG3453 43 GQPGFAAIAAAAEAAGL---TYTHIPVTG---GGITEADVEAFQRALDE-AEGPVLAYCRSGTRSLNLYGLGELDGGMSR 115 (130)
T ss_pred CCCChHHHHHHHHhcCC---ceEEeecCC---CCCCHHHHHHHHHHHHH-hCCCEEeeecCCchHHHHHHHHHHhcCCCH
Confidence 45667788899999999 999999963 35655555433332222 224766666666543211 1 245
Q ss_pred hHHHHHHHHhCC
Q 010125 270 KPLCDVAKQFGI 281 (517)
Q Consensus 270 ~eI~~i~~~~gi 281 (517)
++|.++.+++|+
T Consensus 116 de~~a~g~a~G~ 127 (130)
T COG3453 116 DEIEALGQAAGF 127 (130)
T ss_pred HHHHHHHHhhCc
Confidence 667777777665
No 406
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=48.57 E-value=2e+02 Score=27.91 Aligned_cols=79 Identities=14% Similarity=0.082 Sum_probs=51.4
Q ss_pred CCeEEEeCCCCchHHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc
Q 010125 191 SKLIVYGSDQTHCALQKAAQIV---GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD 267 (517)
Q Consensus 191 ~~~~v~~s~~~H~s~~kaa~~~---G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id 267 (517)
+..+|+++.....-..-+.++- |+ ++..+|+|-. +++++++..++...++...-++|-++|.-..|.+.
T Consensus 30 g~~liLvaR~~~kL~~la~~l~~~~~v---~v~vi~~DLs-----~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~ 101 (265)
T COG0300 30 GYNLILVARREDKLEALAKELEDKTGV---EVEVIPADLS-----DPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL 101 (265)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHHhhCc---eEEEEECcCC-----ChhHHHHHHHHHHhcCCcccEEEECCCcCCccchh
Confidence 4567888876654433333333 55 7888998743 56777777766655555566888999988888663
Q ss_pred --ChhHHHHHHH
Q 010125 268 --PLKPLCDVAK 277 (517)
Q Consensus 268 --pl~eI~~i~~ 277 (517)
+++++.++-+
T Consensus 102 ~~~~~~~~~mi~ 113 (265)
T COG0300 102 ELSLDEEEEMIQ 113 (265)
T ss_pred hCChHHHHHHHH
Confidence 4555555543
No 407
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=46.19 E-value=39 Score=33.28 Aligned_cols=62 Identities=15% Similarity=0.087 Sum_probs=42.3
Q ss_pred EecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh---CCeEEc
Q 010125 222 IKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 285 (517)
Q Consensus 222 vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~---gi~lhv 285 (517)
.|.+. ++++|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.+. ++++++
T Consensus 10 TPf~~--dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 10 THFDA--DGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred cCCCC--CCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 34443 579999999999998888876666666666665555556666776665554 355544
No 408
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=46.18 E-value=1.5e+02 Score=32.19 Aligned_cols=128 Identities=21% Similarity=0.222 Sum_probs=71.2
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCe-EEEeCCCCch----HH
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKL-IVYGSDQTHC----AL 205 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~-~v~~s~~~H~----s~ 205 (517)
...+...+.+-+.+.+-.+.. .|++.|||-.+.+.|-.+++... . . ... -.+.-+.+++ -.
T Consensus 212 ~~~l~~~l~~sV~~r~~advp-------vg~~lSGGlDSS~Iaa~a~~~~~--~---~--~~~~fsvg~~~~~~~D~~~a 277 (542)
T COG0367 212 AEHLRSLLEDAVKRRLVADVP-------VGVFLSGGLDSSLIAAIAAEELG--K---E--GKTTFTVGFEDSDSPDAKYA 277 (542)
T ss_pred HHHHHHHHHHHHHHHhccCCc-------EEEEeCCCccHHHHHHHHHHhcc--c---c--ceeeeEeecCCCCCchHHHH
Confidence 444445555555555433332 68999999877666655554420 0 0 110 0111122221 13
Q ss_pred HHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEc
Q 010125 206 QKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 206 ~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhv 285 (517)
.++|..+|. ..+.+.+ ..+++.+++.+.... .-.....++..|+--+++.+++++.++..
T Consensus 278 ~~~A~~lg~---~h~~~~~--------~~~e~~~~~~~vv~~---------~~~p~~~~~~~ply~~~~~a~~~g~kVvL 337 (542)
T COG0367 278 RAVAKFLGT---PHHEIIL--------TNEELLNALPEVVKA---------LDTPGGMAASIPLYLLSRKARAEGEKVVL 337 (542)
T ss_pred HHHHHHhCC---CcEEEee--------cHHHHHHHHHHHHhh---------cCCCCcccchhHHHHHHHhhhhcCcEEee
Confidence 456778887 5555543 455666666554321 11122256778999999999999988877
Q ss_pred -----ccccccc
Q 010125 286 -----DAAYAGS 292 (517)
Q Consensus 286 -----DaA~g~~ 292 (517)
|.-+||.
T Consensus 338 SGeGADElFgGY 349 (542)
T COG0367 338 SGEGADELFGGY 349 (542)
T ss_pred cCccHHHHhcCC
Confidence 4456665
No 409
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=45.64 E-value=1.6e+02 Score=28.29 Aligned_cols=84 Identities=10% Similarity=0.097 Sum_probs=55.8
Q ss_pred CCchHHHHHHHHcCCCCCCEEEEecCCCCCc-ccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc----ccChhHHHH
Q 010125 200 QTHCALQKAAQIVGIDVKNFRAIKTTKSSSY-GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA----VDPLKPLCD 274 (517)
Q Consensus 200 ~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~-~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~----idpl~eI~~ 274 (517)
..++.+.+++.-.| ..+.+.. | -.++++++.+++.-.+.|..-++++ --|++.... .-++..|..
T Consensus 109 ~~n~~LL~~va~tg----kPVilk~-----G~~~t~~e~~~A~e~i~~~Gn~~i~L~-eRg~~~Y~~~~~n~~dl~ai~~ 178 (250)
T PRK13397 109 MQNFEFLKTLSHID----KPILFKR-----GLMATIEEYLGALSYLQDTGKSNIILC-ERGVRGYDVETRNMLDIMAVPI 178 (250)
T ss_pred ccCHHHHHHHHccC----CeEEEeC-----CCCCCHHHHHHHHHHHHHcCCCeEEEE-ccccCCCCCccccccCHHHHHH
Confidence 35566666666555 3555643 3 5699999999988777675433322 214332222 456888888
Q ss_pred HHHHhCCeEEccccccccc
Q 010125 275 VAKQFGIWVHVDAAYAGSA 293 (517)
Q Consensus 275 i~~~~gi~lhvDaA~g~~~ 293 (517)
+.++.++.+++|.+|+++.
T Consensus 179 lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 179 IQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred HHHHhCCCeEECCCCCCcc
Confidence 8888999999999997664
No 410
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=45.41 E-value=49 Score=30.47 Aligned_cols=50 Identities=18% Similarity=0.149 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 234 PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 234 ~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
...=|.++.=..-.|..|..|++..-+- .|..-+.+++.++|++||+.++
T Consensus 136 ~GhtEaavdLa~lAGl~p~avi~eil~~-dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 136 RGHTEAAVDLARLAGLSPVAVICEILDD-DGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp SSHHHHHHHHHHHTTS-SBEEEEEBBET-TSSBHCHHHHHHHHHHTT-EEE
T ss_pred CChHHHHHHHHHHhCCCCcEEEEEEeCC-CCCcCCHHHHHHHHHHcCCcEE
Confidence 3455666666667899998888887754 8999999999999999999875
No 411
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=45.14 E-value=31 Score=33.71 Aligned_cols=58 Identities=16% Similarity=0.180 Sum_probs=42.9
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 220 RAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 220 ~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
...|.++ ++++|.+.+++.++...+.|...+++..+.|....=..+.-.++.+++.++
T Consensus 8 ~~TPf~~--dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 8 LVTPFKD--DGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred eeCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 3445554 579999999999998888887776666666666655667777887777665
No 412
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=44.90 E-value=1.8e+02 Score=25.10 Aligned_cols=55 Identities=20% Similarity=0.124 Sum_probs=37.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccCh--hHHHHHHH
Q 010125 218 NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPL--KPLCDVAK 277 (517)
Q Consensus 218 ~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl--~eI~~i~~ 277 (517)
++..+++|- -+.+.+++.+++..+.....-+++.++|....+.++++ +++.+..+
T Consensus 53 ~~~~~~~D~-----~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 109 (167)
T PF00106_consen 53 KITFIECDL-----SDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFR 109 (167)
T ss_dssp EEEEEESET-----TSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHH
T ss_pred ccccccccc-----cccccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence 889998873 37888888888776444444577788887777777665 44444433
No 413
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=44.59 E-value=30 Score=34.32 Aligned_cols=56 Identities=11% Similarity=0.139 Sum_probs=46.9
Q ss_pred EecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 222 IKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 222 vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
-|.+. ++++|.+++++.++...++|..-++++.|.|..++=..++-.++.+.+.+.
T Consensus 14 TPF~~--dg~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~ 69 (299)
T COG0329 14 TPFDE--DGSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEA 69 (299)
T ss_pred cCCCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHH
Confidence 34553 478999999999999999887777888888888888889999999988876
No 414
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=44.57 E-value=27 Score=31.22 Aligned_cols=49 Identities=18% Similarity=0.289 Sum_probs=36.4
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhC--CeEEcccccccc
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFG--IWVHVDAAYAGS 292 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~g--i~lhvDaA~g~~ 292 (517)
|..+|+++++.+.+ +|+.- +|.+-.|+++.+..+++| +++|||=..|..
T Consensus 12 ~~~~le~~les~~~------~vflL-----~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl~ 62 (181)
T COG1954 12 DNKDLEKALESESQ------YVFLL-----TGHILNIKEIVKKLKNRGKTVFIHVDLVEGLS 62 (181)
T ss_pred hHHHHHHHhcCCCe------EEEEE-----echhhhHHHHHHHHHhCCcEEEEEeHHhcccC
Confidence 56778888876654 34332 567789999999999987 789999766443
No 415
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=44.36 E-value=1.3e+02 Score=24.15 Aligned_cols=72 Identities=8% Similarity=0.142 Sum_probs=42.2
Q ss_pred CCeEEEeCCCCchHHH--HHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC
Q 010125 191 SKLIVYGSDQTHCALQ--KAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP 268 (517)
Q Consensus 191 ~~~~v~~s~~~H~s~~--kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp 268 (517)
.+.+||....+++|.. +...-.|+ ....+.++.+ -+..++.+.+.+.+.....|.++ ..| ...|-.|+
T Consensus 8 ~~Vvvysk~~Cp~C~~ak~~L~~~~i---~~~~vdid~~----~~~~~~~~~l~~~tg~~tvP~Vf--i~g-~~iGG~dd 77 (99)
T TIGR02189 8 KAVVIFSRSSCCMCHVVKRLLLTLGV---NPAVHEIDKE----PAGKDIENALSRLGCSPAVPAVF--VGG-KLVGGLEN 77 (99)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---CCEEEEcCCC----ccHHHHHHHHHHhcCCCCcCeEE--ECC-EEEcCHHH
Confidence 4566777777777642 34455677 6777777642 23455666676554444566532 333 45677777
Q ss_pred hhHH
Q 010125 269 LKPL 272 (517)
Q Consensus 269 l~eI 272 (517)
+.++
T Consensus 78 l~~l 81 (99)
T TIGR02189 78 VMAL 81 (99)
T ss_pred HHHH
Confidence 6544
No 416
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=44.22 E-value=39 Score=33.65 Aligned_cols=51 Identities=10% Similarity=0.113 Sum_probs=40.4
Q ss_pred CcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 229 SYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 229 ~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
+|++|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 73 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVET 73 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHH
Confidence 479999999999999888887667777777777766777777887777654
No 417
>smart00642 Aamy Alpha-amylase domain.
Probab=44.02 E-value=42 Score=29.98 Aligned_cols=29 Identities=28% Similarity=0.358 Sum_probs=25.4
Q ss_pred CccccccChhHHHHHHHHhCCeEEccccc
Q 010125 261 TAITAVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 261 t~~G~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
...|..++++++++-||++|+.+++|-..
T Consensus 64 ~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~ 92 (166)
T smart00642 64 PRFGTMEDFKELVDAAHARGIKVILDVVI 92 (166)
T ss_pred cccCCHHHHHHHHHHHHHCCCEEEEEECC
Confidence 35678899999999999999999999754
No 418
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=43.49 E-value=2.8e+02 Score=28.17 Aligned_cols=85 Identities=12% Similarity=0.154 Sum_probs=49.1
Q ss_pred eEEEeCCCCchHHHH---HHHHcCCC--CCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcc---eEEEeeccCCccc
Q 010125 193 LIVYGSDQTHCALQK---AAQIVGID--VKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIP---LFLCATIGTTAIT 264 (517)
Q Consensus 193 ~~v~~s~~~H~s~~k---aa~~~G~g--~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p---~~vv~t~gtt~~G 264 (517)
.+++.-+..|.--.. .|+++|-| .+..+.-.-++++ .=-.-.++++|++. |..| -.|.+-+-+|+.|
T Consensus 260 gvlvlEelEHA~~RgA~I~AE~lGygls~Da~HiT~P~~dG--~Ga~~am~raL~~A---gl~pe~i~YvNAHATST~~G 334 (440)
T KOG1394|consen 260 GVLVLEELEHAKKRGAPIYAEVLGYGLSSDAYHITSPDPDG--AGAVLAMERALKDA---GLSPEDIDYVNAHATSTPLG 334 (440)
T ss_pred eEEehHhHHHHHHcCCceeHHhhcCcccccccccCCCCCCc--chHHHHHHHHHHHc---CCChhhcCeeecccccCcCc
Confidence 345555556643322 25666654 3333332223333 33445667777643 3333 4788888899999
Q ss_pred cccChhHHHHHHHHhCCe
Q 010125 265 AVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 265 ~idpl~eI~~i~~~~gi~ 282 (517)
..-...+|..+-.+++..
T Consensus 335 D~aE~~Ai~~vf~~~~~~ 352 (440)
T KOG1394|consen 335 DAAEAEAIKRVFGEHNIA 352 (440)
T ss_pred hHHHHHHHHHHhccCCcc
Confidence 887788888877777654
No 419
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=43.23 E-value=2.7e+02 Score=25.58 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=55.8
Q ss_pred eEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCC----------CchHHHHHHHHcCCCCCCEEEEecCCCCC
Q 010125 160 GVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQ----------THCALQKAAQIVGIDVKNFRAIKTTKSSS 229 (517)
Q Consensus 160 g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~----------~H~s~~kaa~~~G~g~~~v~~vp~d~~~~ 229 (517)
.+..|||..+.+.+.++... |.+ ...++..+.. .+....+.|+.+|+ .+..++++.+.
T Consensus 3 ~v~~SGGkDS~~al~~a~~~------G~~--v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgi---pl~~i~~~~~~- 70 (194)
T cd01994 3 VALISGGKDSCYALYRALEE------GHE--VVALLNLTPEEGSSMMYHTVNHELLELQAEAMGI---PLIRIEISGEE- 70 (194)
T ss_pred EEEecCCHHHHHHHHHHHHc------CCE--EEEEEEEecCCCCcccccccCHHHHHHHHHHcCC---cEEEEeCCCCc-
Confidence 46789999998765544432 321 1111111111 12345567888999 88888764311
Q ss_pred cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccC---hhHHHHHHHHhCCeEE
Q 010125 230 YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDP---LKPLCDVAKQFGIWVH 284 (517)
Q Consensus 230 ~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idp---l~eI~~i~~~~gi~lh 284 (517)
.--.+.|.+.+.+..++|. .. | .+|+++. -.-+-++|++.|+..+
T Consensus 71 -e~~~~~l~~~l~~~~~~g~-~~-v-------v~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 71 -EDEVEDLKELLRKLKEEGV-DA-V-------VFGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred -hHHHHHHHHHHHHHHHcCC-CE-E-------EECccccHHHHHHHHHHHHHcCCEEE
Confidence 1223666666766544431 11 1 2355432 4566778999887663
No 420
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=43.17 E-value=1.1e+02 Score=29.74 Aligned_cols=74 Identities=16% Similarity=0.126 Sum_probs=47.2
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC--eEEc-ccccccccccCccccccccCCCCC
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI--WVHV-DAAYAGSACICPEFRHFIDGVEGA 309 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi--~lhv-DaA~g~~~~~~~~~~~~~~g~~~a 309 (517)
|.+.+.++|+...+. .++.+++ .|+-|.++.-.+|+.+.++|.. .+.| +-|.+++.+.+- .|
T Consensus 76 dse~v~raI~~~~~~--~~IdLii---~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIAL----------aA 140 (285)
T PF01972_consen 76 DSEFVLRAIREAPKD--KPIDLII---HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIAL----------AA 140 (285)
T ss_pred hHHHHHHHHHhcCCC--CceEEEE---ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHHH----------hC
Confidence 334444555443222 3443443 5788999999999999999853 3333 557766665431 67
Q ss_pred CeeeeccccccC
Q 010125 310 DSFSLNAHKWFF 321 (517)
Q Consensus 310 Dsi~~~~hK~l~ 321 (517)
|-+.+++|=.+|
T Consensus 141 DeIvM~p~a~LG 152 (285)
T PF01972_consen 141 DEIVMGPGAVLG 152 (285)
T ss_pred CeEEECCCCccC
Confidence 888888887775
No 421
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=42.74 E-value=84 Score=32.26 Aligned_cols=97 Identities=18% Similarity=0.276 Sum_probs=56.9
Q ss_pred EeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHH
Q 010125 196 YGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYG-LSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCD 274 (517)
Q Consensus 196 ~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~-~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~ 274 (517)
++...+|..+.|. +++.- .+++.+++.. +.+. .+.+.|-+.++...++- -.||.+ ...-|.+.+.+.+.+
T Consensus 95 l~~~~~r~T~~K~-Rv~s~-nQQllRvD~E--e~~~~~~~~~ll~~~~~~l~~~---~~vVLS--DY~KG~L~~~q~~I~ 165 (467)
T COG2870 95 LLRDKNRPTIVKL-RVLSR-NQQLLRLDFE--EKFPIEDENKLLEKIKNALKSF---DALVLS--DYAKGVLTNVQKMID 165 (467)
T ss_pred eEeecCCCceeee-eeecc-cceEEEeccc--ccCcchhHHHHHHHHHHHhhcC---CEEEEe--ccccccchhHHHHHH
Confidence 3445566666554 22222 2256666543 2233 34445555554433221 144444 345689999999999
Q ss_pred HHHHhCCeEEccc------ccccccccCccccc
Q 010125 275 VAKQFGIWVHVDA------AYAGSACICPEFRH 301 (517)
Q Consensus 275 i~~~~gi~lhvDa------A~g~~~~~~~~~~~ 301 (517)
+||+.|+.+.||- =|.|..+.-|....
T Consensus 166 ~ar~~~~pVLvDPKg~Df~~Y~GAtLiTPN~~E 198 (467)
T COG2870 166 LAREAGIPVLVDPKGKDFEKYRGATLITPNLKE 198 (467)
T ss_pred HHHHcCCcEEECCCCcchhhhCCCeecCCCHHH
Confidence 9999999999993 46566665555443
No 422
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=42.60 E-value=1.9e+02 Score=27.96 Aligned_cols=82 Identities=15% Similarity=0.035 Sum_probs=56.4
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHhHhcCCcceEEEeeccCCcc-cc---ccChhHHHHH
Q 010125 201 THCALQKAAQIVGIDVKNFRAIKTTKSSSYG-LSPDSLMAQINSDVEVGLIPLFLCATIGTTAI-TA---VDPLKPLCDV 275 (517)
Q Consensus 201 ~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~-~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~-G~---idpl~eI~~i 275 (517)
.+..+.+++.-.|. .+.+.. |. .++++++.+++.-.+.|..-+ +++-.|++.. +. .-++..|..+
T Consensus 120 ~n~~LL~~~a~~gk----PVilk~-----G~~~t~~e~~~Ave~i~~~Gn~~i-~l~~rG~s~y~~~~~~~~dl~~i~~l 189 (260)
T TIGR01361 120 QNFELLKEVGKQGK----PVLLKR-----GMGNTIEEWLYAAEYILSSGNGNV-ILCERGIRTFEKATRNTLDLSAVPVL 189 (260)
T ss_pred cCHHHHHHHhcCCC----cEEEeC-----CCCCCHHHHHHHHHHHHHcCCCcE-EEEECCCCCCCCCCcCCcCHHHHHHH
Confidence 55666666655554 455543 33 489999999988877775443 3344355333 43 3578999999
Q ss_pred HHHhCCeEEcccccccc
Q 010125 276 AKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 276 ~~~~gi~lhvDaA~g~~ 292 (517)
.+++++.+..|..|.++
T Consensus 190 k~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 190 KKETHLPIIVDPSHAAG 206 (260)
T ss_pred HHhhCCCEEEcCCCCCC
Confidence 98899999999999766
No 423
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=42.19 E-value=38 Score=33.34 Aligned_cols=58 Identities=10% Similarity=0.044 Sum_probs=41.4
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 220 RAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 220 ~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
...|.++ ++++|.+.+++.++...+.|...+++..+.|....=..+.-.++.+++.++
T Consensus 9 ~~TPf~~--dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 9 LVTPFKE--DGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred eeCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHH
Confidence 3445554 579999999999999888887776666666665555666666777666554
No 424
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=41.77 E-value=4.4e+02 Score=27.81 Aligned_cols=122 Identities=20% Similarity=0.207 Sum_probs=63.6
Q ss_pred hHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEe---C-CCCch---
Q 010125 131 ATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYG---S-DQTHC--- 203 (517)
Q Consensus 131 ~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~---s-~~~H~--- 203 (517)
...+++.+.+.+.+.+.-+.. -|++.|||-.+.+.+..+++.. . + .+...++ . .....
T Consensus 235 ~e~l~~~l~~aV~~r~~~~~~-------vg~~LSGGlDSs~iaa~a~~~~--~----~--~~~~~~t~~~~~~~~~~E~~ 299 (467)
T TIGR01536 235 VDELRSLLEDAVKRRLVADVP-------VGVLLSGGLDSSLVAAIARREA--P----R--GPVHTFSIGFEGSPDFDESP 299 (467)
T ss_pred HHHHHHHHHHHHHHHhccCCc-------eEEEecCChhHHHHHHHHHHhc--C----C--CCceEEEEecCCCCCCChHH
Confidence 345566666666655543322 5788999987776655444321 0 0 1122221 1 11112
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 204 ALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 204 s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
-..+.|+.+|+ +...+.+++++ -.+.+.+.+... ..|+ . ....-++-.+.+.++++|+.+
T Consensus 300 ~A~~vA~~lg~---~~~~i~~~~~~----~~~~~~~~v~~~----~~p~--------~-~~~~~~~~~l~~~a~~~G~~v 359 (467)
T TIGR01536 300 YARKVADHLGT---EHHEVLFSVEE----GLDALPEVIYHL----EDPT--------T-IRASIPLYLLSKLAREDGVKV 359 (467)
T ss_pred HHHHHHHHhCC---cCeEEECCHHH----HHHHHHHHHHhh----CCCC--------C-CchHHHHHHHHHHHHhcCCEE
Confidence 35567888898 77777664211 122333333211 1232 1 112235567888899999888
Q ss_pred Eccc
Q 010125 284 HVDA 287 (517)
Q Consensus 284 hvDa 287 (517)
+.+|
T Consensus 360 lltG 363 (467)
T TIGR01536 360 VLSG 363 (467)
T ss_pred EEec
Confidence 8776
No 425
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=41.43 E-value=44 Score=32.75 Aligned_cols=59 Identities=12% Similarity=0.113 Sum_probs=42.4
Q ss_pred EEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 219 FRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 219 v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
....|.++ +|++|.+.+++.++...+.|-..+++..+.|....=..+.-.++.+.+.+.
T Consensus 5 a~~TPf~~--~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 5 ALITPFKE--DGSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred ceeCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 34456664 569999999999998888887776666666666655666677777766654
No 426
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=41.24 E-value=81 Score=27.02 Aligned_cols=70 Identities=17% Similarity=0.237 Sum_probs=45.9
Q ss_pred HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc---------cChhHHHHH
Q 010125 205 LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV---------DPLKPLCDV 275 (517)
Q Consensus 205 ~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i---------dpl~eI~~i 275 (517)
..+.+...|+ ..+.+|+.. +.++.+.++...+-- +....|+++-+.+|. -+|.+ -+.++|.+.
T Consensus 49 ~~~~a~~~gl---~y~~iPv~~---~~~~~~~v~~f~~~~-~~~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~ 120 (135)
T TIGR01244 49 IKAAAEAAGV---TYHHQPVTA---GDITPDDVETFRAAI-GAAEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRR 120 (135)
T ss_pred HHHHHHHCCC---eEEEeecCC---CCCCHHHHHHHHHHH-HhCCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHH
Confidence 3456678899 999999874 256555544332221 223468888888888 67763 366888888
Q ss_pred HHHhCCe
Q 010125 276 AKQFGIW 282 (517)
Q Consensus 276 ~~~~gi~ 282 (517)
+++.|.-
T Consensus 121 ~~~~G~~ 127 (135)
T TIGR01244 121 AQAAGYD 127 (135)
T ss_pred HHHcCCC
Confidence 8877643
No 427
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=41.15 E-value=1.8e+02 Score=30.05 Aligned_cols=132 Identities=15% Similarity=0.156 Sum_probs=70.0
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHH
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLM 238 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le 238 (517)
.+++-++|.-+--.|-..+++ .+..|++.+-+--+..++....+- ++..+-+| ..|.++|.
T Consensus 3 ~ilviGaG~Vg~~va~~la~~-----------~d~~V~iAdRs~~~~~~i~~~~~~---~v~~~~vD-----~~d~~al~ 63 (389)
T COG1748 3 KILVIGAGGVGSVVAHKLAQN-----------GDGEVTIADRSKEKCARIAELIGG---KVEALQVD-----AADVDALV 63 (389)
T ss_pred cEEEECCchhHHHHHHHHHhC-----------CCceEEEEeCCHHHHHHHHhhccc---cceeEEec-----ccChHHHH
Confidence 356666666666555555543 223355444443344444333333 66666666 45889999
Q ss_pred HHHHHhHhcCCcceEEEeeccCCc----------ccc--------ccChhHHHHHHHHhCCeEEcccccccccc--cC-c
Q 010125 239 AQINSDVEVGLIPLFLCATIGTTA----------ITA--------VDPLKPLCDVAKQFGIWVHVDAAYAGSAC--IC-P 297 (517)
Q Consensus 239 ~~i~~~~~~g~~p~~vv~t~gtt~----------~G~--------idpl~eI~~i~~~~gi~lhvDaA~g~~~~--~~-~ 297 (517)
++|++.. +|+-..+.+. +|. .++..++.+.|++.|+-.+.+.-+.-+.. +. .
T Consensus 64 ~li~~~d-------~VIn~~p~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi~nv~a~~ 136 (389)
T COG1748 64 ALIKDFD-------LVINAAPPFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGITNVLAAY 136 (389)
T ss_pred HHHhcCC-------EEEEeCCchhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcchHHHHHHH
Confidence 9998752 3443333322 111 12336677777777777777754433221 00 1
Q ss_pred cccccccCCCCCCeeeecc
Q 010125 298 EFRHFIDGVEGADSFSLNA 316 (517)
Q Consensus 298 ~~~~~~~g~~~aDsi~~~~ 316 (517)
-.+++.+.++.+|++..+.
T Consensus 137 a~~~~~~~i~si~iy~g~~ 155 (389)
T COG1748 137 AAKELFDEIESIDIYVGGL 155 (389)
T ss_pred HHHHhhccccEEEEEEecC
Confidence 1123333567788888774
No 428
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=40.14 E-value=42 Score=33.14 Aligned_cols=57 Identities=12% Similarity=0.084 Sum_probs=42.4
Q ss_pred EEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 221 AIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 221 ~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
..|.++ ++++|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 14 vTPf~~--dg~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 14 VTPFDA--DGSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 345554 579999999999999888887666777777776666667777777766654
No 429
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=39.95 E-value=2.5e+02 Score=25.08 Aligned_cols=70 Identities=7% Similarity=0.004 Sum_probs=36.5
Q ss_pred CCeEEEeCCCC--chH---HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccc
Q 010125 191 SKLIVYGSDQT--HCA---LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITA 265 (517)
Q Consensus 191 ~~~~v~~s~~~--H~s---~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~ 265 (517)
...+|+++... ... ..+..+..|. ++..+.+| --|.++++++++...+...+...|+-.++....+.
T Consensus 25 ~~~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~D-----v~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~ 96 (181)
T PF08659_consen 25 ARRLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCD-----VTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAP 96 (181)
T ss_dssp -SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE-------TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-
T ss_pred CCEEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccC-----ccCHHHHHHHHHHHHhccCCcceeeeeeeeecccc
Confidence 34466777662 222 3334445577 89999887 34899999999887765533345777777666665
Q ss_pred ccC
Q 010125 266 VDP 268 (517)
Q Consensus 266 idp 268 (517)
+.+
T Consensus 97 ~~~ 99 (181)
T PF08659_consen 97 IQD 99 (181)
T ss_dssp GCC
T ss_pred ccc
Confidence 544
No 430
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=39.73 E-value=1.8e+02 Score=29.65 Aligned_cols=82 Identities=13% Similarity=0.011 Sum_probs=52.6
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCCCCcc-cCHHHHHHHHHHhHhcCCcceEEEeeccCCccc---cc-cChhHHHHH
Q 010125 201 THCALQKAAQIVGIDVKNFRAIKTTKSSSYG-LSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT---AV-DPLKPLCDV 275 (517)
Q Consensus 201 ~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~-~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G---~i-dpl~eI~~i 275 (517)
.++.+.+.+.-.|. .+.+. +|. .++++++.+++.-.+.|...+ +++-.|++..- .- -++..|..+
T Consensus 213 ~n~~LL~~~a~~gk----PVilk-----~G~~~t~~e~~~Ave~i~~~Gn~~i-~L~erg~s~yp~~~~~~ldl~~i~~l 282 (360)
T PRK12595 213 QNFELLKAAGRVNK----PVLLK-----RGLSATIEEFIYAAEYIMSQGNGQI-ILCERGIRTYEKATRNTLDISAVPIL 282 (360)
T ss_pred cCHHHHHHHHccCC----cEEEe-----CCCCCCHHHHHHHHHHHHHCCCCCE-EEECCccCCCCCCCCCCcCHHHHHHH
Confidence 34444454444443 44443 334 699999999988877776443 33322433221 11 378999989
Q ss_pred HHHhCCeEEcccccccc
Q 010125 276 AKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 276 ~~~~gi~lhvDaA~g~~ 292 (517)
.+++++.+.+|..|.++
T Consensus 283 k~~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 283 KQETHLPVMVDVTHSTG 299 (360)
T ss_pred HHHhCCCEEEeCCCCCc
Confidence 88899999999999765
No 431
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=39.52 E-value=3.3e+02 Score=28.35 Aligned_cols=131 Identities=18% Similarity=0.239 Sum_probs=73.0
Q ss_pred CeEEEeCCCCchHHHH-HHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeecc--------CCc
Q 010125 192 KLIVYGSDQTHCALQK-AAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIG--------TTA 262 (517)
Q Consensus 192 ~~~v~~s~~~H~s~~k-aa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~g--------tt~ 262 (517)
+.++|+|...-..-.| =|.-+|+..+++...+ ..+++++.+.+++. +|-++|+-.- ++.
T Consensus 121 ~~vLYVsGEES~~QiklRA~RL~~~~~~l~l~a-------Et~~e~I~~~l~~~-----~p~lvVIDSIQT~~s~~~~Sa 188 (456)
T COG1066 121 GKVLYVSGEESLQQIKLRADRLGLPTNNLYLLA-------ETNLEDIIAELEQE-----KPDLVVIDSIQTLYSEEITSA 188 (456)
T ss_pred CcEEEEeCCcCHHHHHHHHHHhCCCccceEEeh-------hcCHHHHHHHHHhc-----CCCEEEEeccceeecccccCC
Confidence 3688988665544333 4678888665555553 45888888888763 3555555442 223
Q ss_pred cccccCh----hHHHHHHHHhCCeE----Ec--ccccccccccCccccc---cccCCCCCCeeeeccccccCCC-CcceE
Q 010125 263 ITAVDPL----KPLCDVAKQFGIWV----HV--DAAYAGSACICPEFRH---FIDGVEGADSFSLNAHKWFFAT-LDCCC 328 (517)
Q Consensus 263 ~G~idpl----~eI~~i~~~~gi~l----hv--DaA~g~~~~~~~~~~~---~~~g~~~aDsi~~~~hK~l~~p-~~~g~ 328 (517)
.|.+..+ .++.++||+.|+++ || ||+-+|.-.+ +.+-+ .+.|-.....=..-.+|.=+.+ -..|+
T Consensus 189 pGsVsQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGPrvL-EHmVDtVlyFEGd~~~~~RiLR~vKNRFG~t~EiGv 267 (456)
T COG1066 189 PGSVSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVL-EHMVDTVLYFEGDRHSRYRILRSVKNRFGATNELGV 267 (456)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCchhe-eeeeeEEEEEeccCCCceeeeehhcccCCcccceeE
Confidence 3655444 56778999999887 33 5666665321 11100 1222222334444555644333 44677
Q ss_pred EEEeCch
Q 010125 329 LWVKDPR 335 (517)
Q Consensus 329 l~~~~~~ 335 (517)
|-+++..
T Consensus 268 FeM~~~G 274 (456)
T COG1066 268 FEMTENG 274 (456)
T ss_pred EEEecCC
Confidence 6666543
No 432
>PRK10638 glutaredoxin 3; Provisional
Probab=38.68 E-value=1.7e+02 Score=22.23 Aligned_cols=68 Identities=13% Similarity=0.195 Sum_probs=38.9
Q ss_pred CeEEEeCCCCchH--HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccCh
Q 010125 192 KLIVYGSDQTHCA--LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPL 269 (517)
Q Consensus 192 ~~~v~~s~~~H~s--~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl 269 (517)
+.++|....+.++ +.+.....|+ ....++++.+ .+ ..+.+.+.......|.+++ +....|-.+++
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi---~y~~~dv~~~------~~-~~~~l~~~~g~~~vP~i~~---~g~~igG~~~~ 69 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGV---SFQEIPIDGD------AA-KREEMIKRSGRTTVPQIFI---DAQHIGGCDDL 69 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCC---CcEEEECCCC------HH-HHHHHHHHhCCCCcCEEEE---CCEEEeCHHHH
Confidence 4567777777666 3456667788 7888887632 22 2333444444455675433 34455666666
Q ss_pred hHH
Q 010125 270 KPL 272 (517)
Q Consensus 270 ~eI 272 (517)
.++
T Consensus 70 ~~~ 72 (83)
T PRK10638 70 YAL 72 (83)
T ss_pred HHH
Confidence 554
No 433
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=38.30 E-value=62 Score=28.90 Aligned_cols=72 Identities=15% Similarity=0.174 Sum_probs=38.0
Q ss_pred CeEEEeCCC-CchHHHHHHHHcCCCCCCEEEEecCCCCC--cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 192 KLIVYGSDQ-THCALQKAAQIVGIDVKNFRAIKTTKSSS--YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 192 ~~~v~~s~~-~H~s~~kaa~~~G~g~~~v~~vp~d~~~~--~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+.+|..+.. ........++-.|+ ++..++...... ..++.+.+.++++--......|++|.+..|..-||.+
T Consensus 34 KTII~L~~e~~~~~~~~f~~~~~I---~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v 108 (164)
T PF03162_consen 34 KTIINLRPEPPSQDFLEFAEENGI---KLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV 108 (164)
T ss_dssp SEEEE--SS---HHHHHHHHHTT----EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH
T ss_pred ceEEEecCCCCCHHHHHHHhhcCc---eEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH
Confidence 345666544 34456667888999 999998864321 2467778877775433333459999999999999974
No 434
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=37.28 E-value=81 Score=29.16 Aligned_cols=49 Identities=14% Similarity=0.080 Sum_probs=38.3
Q ss_pred HHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 235 DSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 235 ~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
..=|.++.=.+-+|..|..|++..-+ ..|..-..+++.++|++||+.++
T Consensus 142 GhTEaavdL~~lAGl~p~~vicEil~-~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 142 GHTEASVDLAELAGLKPAGVICEMMN-DDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred ChHHHHHHHHHHcCCCceEEEEEEeC-CCCCccCHHHHHHHHHHcCCcEE
Confidence 34556666556678889887777744 47999999999999999999884
No 435
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=36.61 E-value=1.4e+02 Score=27.99 Aligned_cols=74 Identities=9% Similarity=0.162 Sum_probs=52.3
Q ss_pred hHHHHHHHHc-CCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc--cChhHHHHHHHHh
Q 010125 203 CALQKAAQIV-GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV--DPLKPLCDVAKQF 279 (517)
Q Consensus 203 ~s~~kaa~~~-G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i--dpl~eI~~i~~~~ 279 (517)
.+++.|+.++ ..|...+.++|.. |--..++++..-+...++|. . + -|||-| |++++|.++|.+-
T Consensus 135 V~vetAiaml~dmG~~SiKffPM~----Gl~~leE~~avA~aca~~g~---~--l----EPTGGIdl~Nf~~I~~i~lda 201 (236)
T TIGR03581 135 VPIETAIAMLKDMGGSSVKFFPMG----GLKHLEEYAAVAKACAKHGF---Y--L----EPTGGIDLDNFEEIVQIALDA 201 (236)
T ss_pred eeHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCC---c--c----CCCCCccHHhHHHHHHHHHHc
Confidence 3466665544 5677789999984 35578888887777777662 1 1 377877 5899999999999
Q ss_pred CCeEEccccc
Q 010125 280 GIWVHVDAAY 289 (517)
Q Consensus 280 gi~lhvDaA~ 289 (517)
|+..++=-.|
T Consensus 202 Gv~kviPHIY 211 (236)
T TIGR03581 202 GVEKVIPHVY 211 (236)
T ss_pred CCCeeccccc
Confidence 9876553333
No 436
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=36.12 E-value=54 Score=32.31 Aligned_cols=57 Identities=11% Similarity=0.193 Sum_probs=41.4
Q ss_pred EEecCCCCCcccCHHHHHHHHHHhHh-cCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 221 AIKTTKSSSYGLSPDSLMAQINSDVE-VGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 221 ~vp~d~~~~~~~d~~~Le~~i~~~~~-~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
.-|.+. ++++|.+.+++.++...+ .|-.-+++..+.|....=..+.-.++.+.+.++
T Consensus 12 ~TPf~~--dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~ 69 (293)
T PRK04147 12 LTPFDE--DGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEE 69 (293)
T ss_pred ECcCCC--CCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHH
Confidence 345554 579999999999999888 786666677766666555666777777766654
No 437
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=35.86 E-value=57 Score=32.21 Aligned_cols=57 Identities=14% Similarity=0.116 Sum_probs=41.2
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHH
Q 010125 220 RAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQ 278 (517)
Q Consensus 220 ~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~ 278 (517)
...|.++ ++++|.+.+++.++...++|-.-+++..+.|....=..+.-.++.+.+.+
T Consensus 8 ~~TPf~~--dg~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~ 64 (294)
T TIGR02313 8 LITPFKR--NGDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAID 64 (294)
T ss_pred eeCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHH
Confidence 3445554 57999999999999988888666666666666666566777777776544
No 438
>PLN02417 dihydrodipicolinate synthase
Probab=35.84 E-value=54 Score=32.07 Aligned_cols=57 Identities=14% Similarity=0.080 Sum_probs=41.4
Q ss_pred EEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 221 AIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 221 ~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
..|.++ ++.+|.+.+++.++...++|-.-+++..+.|...+=..+.-.++.+.+.+.
T Consensus 10 ~TPf~~--~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~ 66 (280)
T PLN02417 10 KTPYLP--DGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNC 66 (280)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHH
Confidence 345554 569999999999998888887666777777766666667777777665554
No 439
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=35.60 E-value=1.9e+02 Score=25.22 Aligned_cols=62 Identities=15% Similarity=0.033 Sum_probs=38.8
Q ss_pred chHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHH
Q 010125 202 HCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLC 273 (517)
Q Consensus 202 H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~ 273 (517)
.+.+.+.++..|. +++.+.+-++ |.+.++++|++..++ ...=+| ++.|.+..|..|-..++.
T Consensus 22 ~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~-~~~DlV-ittGG~s~g~~D~t~~al 83 (152)
T cd00886 22 GPALVELLEEAGH---EVVAYEIVPD-----DKDEIREALIEWADE-DGVDLI-LTTGGTGLAPRDVTPEAT 83 (152)
T ss_pred HHHHHHHHHHcCC---eeeeEEEcCC-----CHHHHHHHHHHHHhc-CCCCEE-EECCCcCCCCCcCcHHHH
Confidence 3456666788888 7777766542 678888888765441 011144 444667778888766543
No 440
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=35.36 E-value=2.5e+02 Score=28.56 Aligned_cols=84 Identities=10% Similarity=0.013 Sum_probs=55.0
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccC-----CccccccChhHHHHH
Q 010125 201 THCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGT-----TAITAVDPLKPLCDV 275 (517)
Q Consensus 201 ~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gt-----t~~G~idpl~eI~~i 275 (517)
.++.+.+++.-.| ..+.+.. ...++++++..+++.-.+.|..- ++++-.|. +.+-..-++..|..+
T Consensus 196 ~n~~LL~~va~t~----kPVllk~----G~~~t~ee~~~A~e~i~~~Gn~~-viL~erG~rtf~s~y~~~~~dl~ai~~l 266 (352)
T PRK13396 196 QNFSLLKKVGAQD----KPVLLKR----GMAATIDEWLMAAEYILAAGNPN-VILCERGIRTFDRQYTRNTLDLSVIPVL 266 (352)
T ss_pred cCHHHHHHHHccC----CeEEEeC----CCCCCHHHHHHHHHHHHHcCCCe-EEEEecCCccCcCCCCCCCcCHHHHHHH
Confidence 3455555554444 3455543 12459999999998877666543 44444443 222244678999999
Q ss_pred HHHhCCeEEccccccccc
Q 010125 276 AKQFGIWVHVDAAYAGSA 293 (517)
Q Consensus 276 ~~~~gi~lhvDaA~g~~~ 293 (517)
.+.+++.+++|.+|+.+.
T Consensus 267 k~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 267 RSLTHLPIMIDPSHGTGK 284 (352)
T ss_pred HHhhCCCEEECCcccCCc
Confidence 888899999999998754
No 441
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=35.24 E-value=54 Score=31.96 Aligned_cols=58 Identities=16% Similarity=0.113 Sum_probs=38.8
Q ss_pred EEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 220 RAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 220 ~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
...|.++ ++.+|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.++
T Consensus 5 ~~TPf~~--dg~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 5 LVTPFTA--DGEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred eeCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHH
Confidence 3456654 569999999999998888776555555555554444556666666666554
No 442
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=34.84 E-value=5.6e+02 Score=26.86 Aligned_cols=87 Identities=20% Similarity=0.217 Sum_probs=46.4
Q ss_pred eEEEeCCCCchH-----HHHHHHHcCCCCCCEEEEecCCCCCcccCHHHH-HHHHHHhHhcCCcceEEEeeccCCc--cc
Q 010125 193 LIVYGSDQTHCA-----LQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSL-MAQINSDVEVGLIPLFLCATIGTTA--IT 264 (517)
Q Consensus 193 ~~v~~s~~~H~s-----~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~L-e~~i~~~~~~g~~p~~vv~t~gtt~--~G 264 (517)
.+++++...+-+ +...+...|+ .+...+. .-++..+ .++++.....+ .-++++-|+|-.. ..
T Consensus 130 kV~lV~~D~~R~~a~~QL~~~a~~~gv---p~~~~~~------~~~P~~i~~~al~~~~~~~-~DvVIIDTaGr~~~d~~ 199 (428)
T TIGR00959 130 KVLLVACDLYRPAAIEQLKVLGQQVGV---PVFALGK------GQSPVEIARRALEYAKENG-FDVVIVDTAGRLQIDEE 199 (428)
T ss_pred eEEEEeccccchHHHHHHHHHHHhcCC---ceEecCC------CCCHHHHHHHHHHHHHhcC-CCEEEEeCCCccccCHH
Confidence 455555454432 2234556676 5554432 2355444 34444432222 2357888887543 23
Q ss_pred cccChhHHHHHHHHhCCeEEccccc
Q 010125 265 AVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 265 ~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
.++.+.++.++++..++++++|+..
T Consensus 200 l~~eL~~i~~~~~p~e~lLVvda~t 224 (428)
T TIGR00959 200 LMEELAAIKEILNPDEILLVVDAMT 224 (428)
T ss_pred HHHHHHHHHHhhCCceEEEEEeccc
Confidence 4455566666666678899999753
No 443
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=34.39 E-value=55 Score=30.83 Aligned_cols=52 Identities=21% Similarity=0.239 Sum_probs=31.4
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC---eEE
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI---WVH 284 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi---~lh 284 (517)
.-+.|.++++..++++.+.=++-+.+..-..+.++.|.+|.++|+++|+ ++|
T Consensus 12 ~n~~l~~~~~~~k~~~~~lHl~GLlSdGGVHSh~~Hl~al~~~a~~~gv~~V~vH 66 (223)
T PF06415_consen 12 KNPVLLEAIEHAKKNGGRLHLMGLLSDGGVHSHIDHLFALIKLAKKQGVKKVYVH 66 (223)
T ss_dssp TSHHHHHHHHHHCCTT--EEEEEEESS-SSS--HHHHHHHHHHHHHTT-SEEEEE
T ss_pred cCHHHHHHHHHHHhcCCeEEEEEEecCCCccccHHHHHHHHHHHHHcCCCEEEEE
Confidence 3467888888776655444344444333345667889999999999984 555
No 444
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=34.08 E-value=2.8e+02 Score=29.32 Aligned_cols=59 Identities=17% Similarity=0.369 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHHHHhcCcEEEeee-eECCEeEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Q 010125 451 EQINEFNRELLESINASGKAYMTHA-VLGGIYAIRFATGATLTEKRHVVVAWTVVQQHLEAFQ 512 (517)
Q Consensus 451 ~~~~~~~~~l~~~l~~~g~~~~~~~-~~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~~~~l~ 512 (517)
.+++.+|-.|.+.|.....+|-.+- +-+|..|+||.+. +.+.|++.+++.+.+.++++.
T Consensus 637 qeinhLNidLVeaLKStDaAFS~Gd~Tr~Gl~CVkFGMl---sd~kdleeLldlVaqkGKeie 696 (838)
T KOG0630|consen 637 QEINHLNIDLVEALKSTDAAFSLGDCTRDGLICVKFGML---SDEKDLEELLDLVAQKGKEIE 696 (838)
T ss_pred HHHhhccHHHHHHHhhhhhhcccCCccccceeEEEeccc---cchhhHHHHHHHHHHhchhhh
Confidence 3557777888888876655553332 3367789999864 477789998888877666543
No 445
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=34.07 E-value=56 Score=32.42 Aligned_cols=62 Identities=11% Similarity=0.036 Sum_probs=42.8
Q ss_pred EecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh---CCeEEc
Q 010125 222 IKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 285 (517)
Q Consensus 222 vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~---gi~lhv 285 (517)
.|.+. ++++|.+.+++.++...++|-.-+++..+.|....=..+.-.++.+.+.+. ++.+++
T Consensus 17 TPf~~--dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~~~~~~~pvi~ 81 (303)
T PRK03620 17 TPFDA--DGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVETTAGRVPVIA 81 (303)
T ss_pred CCCCC--CCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 35553 579999999999998888886666666666665555556666777766554 355543
No 446
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=33.64 E-value=2e+02 Score=29.41 Aligned_cols=60 Identities=20% Similarity=0.180 Sum_probs=39.2
Q ss_pred HHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc-ChhHHHHHHHHhCCeEEc
Q 010125 210 QIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD-PLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 210 ~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id-pl~eI~~i~~~~gi~lhv 285 (517)
...++ .++..-+ ++-.-|++.|+++++.. .|.+|++-.++. + ++++++++|++||..+.+
T Consensus 185 ~av~v---PLIL~gs---g~~~kD~eVLeaaLe~~--~G~kpLL~SAt~--------e~Ny~~ia~lAk~yg~~Vvv 245 (389)
T TIGR00381 185 QAVDV---PIVIGGS---GNPEKDPLVLEKAAEVA--EGERCLLASANL--------DLDYEKIANAAKKYGHVVLS 245 (389)
T ss_pred HhCCC---CEEEeCC---CCCcCCHHHHHHHHHHh--CCCCcEEEecCc--------hhhHHHHHHHHHHhCCeEEE
Confidence 44455 5544433 23356999999998764 355564432322 3 789999999999988765
No 447
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=32.76 E-value=1e+02 Score=28.89 Aligned_cols=47 Identities=11% Similarity=0.031 Sum_probs=35.6
Q ss_pred HHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 237 LMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 237 Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
=|.++.=.+-+|..|..|++..-+ ..|..-..+++.++|++||+.++
T Consensus 155 TEaavdLa~lAGl~p~~vicEil~-~dG~ma~~~~l~~fA~~h~l~~i 201 (218)
T PRK00910 155 TEGTVDLMQMAGLQPAGVLCELTN-PDGTMAKTPEIIAFGKLHNMPVL 201 (218)
T ss_pred cHHHHHHHHHcCCCceEEEEEEec-CCCCcCCHHHHHHHHHHcCCcEE
Confidence 344554445578888777777744 56999999999999999999883
No 448
>PRK05872 short chain dehydrogenase; Provisional
Probab=32.53 E-value=4.4e+02 Score=25.59 Aligned_cols=66 Identities=14% Similarity=-0.007 Sum_probs=37.0
Q ss_pred EEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 194 IVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 194 ~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
+++++ -......+.++.++. ...+..+++|- -|.+++++.+++..+....+-+|+.++|....+.+
T Consensus 36 V~~~~-r~~~~l~~~~~~l~~-~~~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~ 101 (296)
T PRK05872 36 LALVD-LEEAELAALAAELGG-DDRVLTVVADV-----TDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSV 101 (296)
T ss_pred EEEEe-CCHHHHHHHHHHhcC-CCcEEEEEecC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCc
Confidence 34443 333344445555543 22566766663 37788888877654432234477888876655544
No 449
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=32.51 E-value=51 Score=31.66 Aligned_cols=61 Identities=5% Similarity=-0.030 Sum_probs=35.5
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccc
Q 010125 218 NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDA 287 (517)
Q Consensus 218 ~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDa 287 (517)
+++.-|+-... -+.+.+++.+.+-.+ +|+...-.-..+..-.+++|.+++++.++.+++||
T Consensus 79 dLIVHP~l~~~---~av~~i~k~L~Rlha------vVIGPGLGRdp~~~k~i~~iley~~~~dvP~VIDa 139 (306)
T KOG3974|consen 79 DLIVHPVLDQE---NAVDIIEKLLQRLHA------VVIGPGLGRDPAILKEIAKILEYLRGKDVPLVIDA 139 (306)
T ss_pred ceeecccccCC---chHhHHHHHHhheeE------EEECCCCCCCHHHHHHHHHHHHHHhcCCCcEEEcC
Confidence 45555553211 266677776665432 33332211122333447888889999999999996
No 450
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=32.46 E-value=2.1e+02 Score=24.25 Aligned_cols=62 Identities=18% Similarity=0.085 Sum_probs=39.0
Q ss_pred CchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHH
Q 010125 201 THCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCD 274 (517)
Q Consensus 201 ~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~ 274 (517)
..+.+...++..|. ++...++-++ |.+++++++++..++. =++++.|.+..|..|-..+..+
T Consensus 20 n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~i~~~~~~~----DlvittGG~g~g~~D~t~~ai~ 81 (133)
T cd00758 20 NGPALEALLEDLGC---EVIYAGVVPD-----DADSIRAALIEASREA----DLVLTTGGTGVGRRDVTPEALA 81 (133)
T ss_pred hHHHHHHHHHHCCC---EEEEeeecCC-----CHHHHHHHHHHHHhcC----CEEEECCCCCCCCCcchHHHHH
Confidence 44556666777887 7777765432 6778888887654321 2445556667787777665443
No 451
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=32.23 E-value=60 Score=32.22 Aligned_cols=59 Identities=17% Similarity=0.079 Sum_probs=41.9
Q ss_pred cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc-cChhHHHHHHHHhCCeEEccccc
Q 010125 230 YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV-DPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 230 ~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i-dpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
..++.+++++.++.-.+. ....-+++.+|+-|.|.- |-+.+|.++|++.|+.+++|..-
T Consensus 109 p~is~~~~~~~l~~~~~~-l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 109 PEISEAELEQFLEQLKAL-LESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCCCHHHHHHHHHHHHHh-cccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECCh
Confidence 367777777766554331 111235667788888865 66899999999999999999753
No 452
>PRK11633 cell division protein DedD; Provisional
Probab=32.05 E-value=2e+02 Score=27.24 Aligned_cols=49 Identities=16% Similarity=0.199 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCc-EEEeeee-ECCEeEEEEEecCCCCcHHHHHHHHHHHHHH
Q 010125 457 NRELLESINASGK-AYMTHAV-LGGIYAIRFATGATLTEKRHVVVAWTVVQQH 507 (517)
Q Consensus 457 ~~~l~~~l~~~g~-~~~~~~~-~~g~~~lR~~~~~~~t~~~di~~l~~~l~~~ 507 (517)
...|..+|...|. +|+.... .+| .+.|+-+ ++..++++++++...|+++
T Consensus 163 A~~l~~kL~~~G~~Ay~~~~~~~~G-~~tRV~V-GP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 163 VNEIVAKLRLSGYRVYTVPSTPVQG-KITRIYV-GPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHCCCeeEEEeeecCCC-cEEEEEe-CCCCCHHHHHHHHHHHHHh
Confidence 4678888888886 3544333 344 4678877 6899999999999998875
No 453
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=31.82 E-value=2.6e+02 Score=27.60 Aligned_cols=54 Identities=11% Similarity=0.119 Sum_probs=31.1
Q ss_pred eEEcCCchHHHHHH-HHHHHHHHHHHhcccCCCCeEEEeCCCCc-hHHHHHHHHcCCCCCCEEEEec
Q 010125 160 GVIQGTTCEAILCT-LTAARDRVLNKIGRENISKLIVYGSDQTH-CALQKAAQIVGIDVKNFRAIKT 224 (517)
Q Consensus 160 g~~t~ggt~a~~~a-l~~ar~~~~~~~g~~~~~~~~v~~s~~~H-~s~~kaa~~~G~g~~~v~~vp~ 224 (517)
.+++.|+|.+|... +..+... .| -+.+|+++.... .......+.+|. +|+.++-
T Consensus 58 ~vv~~g~ssGN~g~alA~~a~~----~G----~~~~ivvp~~~~~~~~~~~~~~~Ga---~v~~v~~ 113 (311)
T TIGR01275 58 TVITVGAIQSNHARATALAAKK----LG----LDAVLVLREKEELNGNLLLDKLMGA---ETRVYSA 113 (311)
T ss_pred EEEEcCCchhHHHHHHHHHHHH----hC----CceEEEecCCccCCCCHHHHHHcCC---EEEEECc
Confidence 57888777777642 2222221 13 346677776332 223344688999 8888863
No 454
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=31.71 E-value=2.6e+02 Score=25.94 Aligned_cols=76 Identities=18% Similarity=0.194 Sum_probs=44.2
Q ss_pred CeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhH
Q 010125 192 KLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKP 271 (517)
Q Consensus 192 ~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~e 271 (517)
..++++-+. .....+..+-.|+ .++..+.+ |.+.|.++++... .|+...+.+....++-...
T Consensus 24 ~V~~l~R~~-~~~~~~~l~~~g~---~vv~~d~~-------~~~~l~~al~g~d-------~v~~~~~~~~~~~~~~~~~ 85 (233)
T PF05368_consen 24 SVRALVRDP-SSDRAQQLQALGA---EVVEADYD-------DPESLVAALKGVD-------AVFSVTPPSHPSELEQQKN 85 (233)
T ss_dssp CEEEEESSS-HHHHHHHHHHTTT---EEEES-TT--------HHHHHHHHTTCS-------EEEEESSCSCCCHHHHHHH
T ss_pred CcEEEEecc-chhhhhhhhcccc---eEeecccC-------CHHHHHHHHcCCc-------eEEeecCcchhhhhhhhhh
Confidence 445555543 3333444556777 66544332 8899999998543 3444444433444555678
Q ss_pred HHHHHHHhCCeEEc
Q 010125 272 LCDVAKQFGIWVHV 285 (517)
Q Consensus 272 I~~i~~~~gi~lhv 285 (517)
+++.|++.|+...|
T Consensus 86 li~Aa~~agVk~~v 99 (233)
T PF05368_consen 86 LIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHT-SEEE
T ss_pred HHHhhhccccceEE
Confidence 89999999976655
No 455
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=31.45 E-value=71 Score=31.46 Aligned_cols=57 Identities=12% Similarity=0.189 Sum_probs=38.2
Q ss_pred EEecCCCCCcccCHHHHHHHHHHhHhcC-CcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 221 AIKTTKSSSYGLSPDSLMAQINSDVEVG-LIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 221 ~vp~d~~~~~~~d~~~Le~~i~~~~~~g-~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
.-|.+. ++++|.+.+++.++...+.| -.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 9 ~TPf~~--dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~ 66 (290)
T TIGR00683 9 LVSFNE--DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDE 66 (290)
T ss_pred ecCCCC--CCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHH
Confidence 345554 56999999999999888777 5555565555555544555666666655554
No 456
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.16 E-value=1.1e+02 Score=28.88 Aligned_cols=45 Identities=16% Similarity=0.050 Sum_probs=33.7
Q ss_pred HHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 238 MAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 238 e~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
|..+.=.+-.|..|..|++..- +..|..-..+++.++|++||+.+
T Consensus 160 EAavdLa~lAGl~P~~vicEil-~~dG~ma~~~~l~~fA~~~~l~i 204 (230)
T PRK00014 160 EGSVDLAALAGLRPAGVLCELM-NADGTMMRGASLERYAAKEGLVA 204 (230)
T ss_pred HHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcE
Confidence 4444444456777877777763 35688999999999999999988
No 457
>PF10022 DUF2264: Uncharacterized protein conserved in bacteria (DUF2264); InterPro: IPR016624 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=31.13 E-value=3.5e+02 Score=27.63 Aligned_cols=125 Identities=16% Similarity=0.253 Sum_probs=71.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCC-----CChhhHhh----------hC----CCCCCCCCCCHHHHHHH
Q 010125 22 DSEEFRRQGHMIIDFIADYYKNVEK---YPVRSQ-----VEPGYLQK----------VL----PESAPNNPESMETILQD 79 (517)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~~~l~~----------~~----~~~~p~~~~~~~~il~~ 79 (517)
+++++.+++.++++-+..|+..-.. .|+.+. ...+.|.. .+ +..-++.+....++.+.
T Consensus 2 tR~~w~~~~~~ll~p~~~~~s~~~~~~~~P~~~~a~~~~~~a~~LEgfaR~l~g~ap~l~~~~~~~~~~~~~~~~~~~~~ 81 (361)
T PF10022_consen 2 TRADWVEALDKLLEPLLPYLSPGGARIRMPGESGAHYDRKAADYLEGFARPLWGAAPWLAGGGEDDDTEEGKLREKLREL 81 (361)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCcccCCCCCcCCcCcchhHHHHHHHHHHHHHHHHHhcCCCcCcccccccHHHHHHH
Confidence 5678888899999999888865432 333322 11121221 01 11223456667788888
Q ss_pred HHHhhcCCCCCCCCCccceeCCCCCChHHHHHHHHHhcccccccccccChhhHHHHHHHHHHHHHHcCCC
Q 010125 80 VQQHIVPGITHWQSPNYFAYFPSSGSIAGFLGEMLSSGFNIVGFNWISSPAATELENIVMDWLGQMLKLP 149 (517)
Q Consensus 80 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~ 149 (517)
..+-+..+ +...||.|+++........-..+.+....+-.....|. +....-.+.+++||.+.-+..
T Consensus 82 ~~~gi~~G-tdP~spdyw~~~~~~dQ~~VEaa~la~aL~~a~~~lW~--~L~~~~k~~l~~wL~~~~~~~ 148 (361)
T PF10022_consen 82 YRKGIANG-TDPKSPDYWGFIGDYDQRLVEAASLALALLRAPEWLWD--PLDEEEKENLVDWLKQIRGIK 148 (361)
T ss_pred HHHHHHhc-CCCCCccccCCcccchhhHhHHHHHHHHHHHCHHHHHh--hCCHHHHHHHHHHHHhcCcCC
Confidence 88877766 45689999998765422221122222222222223333 455666788999999876553
No 458
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.04 E-value=1.1e+02 Score=28.53 Aligned_cols=48 Identities=17% Similarity=0.112 Sum_probs=36.8
Q ss_pred HHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEE
Q 010125 236 SLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVH 284 (517)
Q Consensus 236 ~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lh 284 (517)
.=|..+.=.+-.|..|..|++..- +..|..-..+++.++|++||+.++
T Consensus 153 HTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~i 200 (214)
T PRK01792 153 HTEAAVDLARLAGYKEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAVV 200 (214)
T ss_pred hHHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcEE
Confidence 445555555567888877777774 456999999999999999999883
No 459
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=30.85 E-value=76 Score=31.15 Aligned_cols=57 Identities=16% Similarity=0.239 Sum_probs=39.5
Q ss_pred EEecCCCCCcccCHHHHHHHHHHhHhc-CCcceEEEeeccCCccccccChhHHHHHHHHh
Q 010125 221 AIKTTKSSSYGLSPDSLMAQINSDVEV-GLIPLFLCATIGTTAITAVDPLKPLCDVAKQF 279 (517)
Q Consensus 221 ~vp~d~~~~~~~d~~~Le~~i~~~~~~-g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~ 279 (517)
..|.++ ++.+|.+.+++.++...+. |-.-+++..+.|....=..+.-.++.+.+.++
T Consensus 9 ~TPf~~--dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~ 66 (288)
T cd00954 9 LTPFDE--NGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEA 66 (288)
T ss_pred ECCCCC--CCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHH
Confidence 345554 5699999999999988887 76666666666665555555666666665554
No 460
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=30.59 E-value=56 Score=27.03 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccC
Q 010125 204 ALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGT 260 (517)
Q Consensus 204 s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gt 260 (517)
...++|+.+|+ ..+.+|+... .+..+.+++..+.-.. -..|+++.+-.|+
T Consensus 48 ~~~~~a~~~Gl---~y~~iPv~~~---~~~~~~v~~f~~~l~~-~~~Pvl~hC~sG~ 97 (110)
T PF04273_consen 48 EEAAAAEALGL---QYVHIPVDGG---AITEEDVEAFADALES-LPKPVLAHCRSGT 97 (110)
T ss_dssp CHHHHHHHCT----EEEE----TT---T--HHHHHHHHHHHHT-TTTSEEEE-SCSH
T ss_pred HHHHHHHHcCC---eEEEeecCCC---CCCHHHHHHHHHHHHh-CCCCEEEECCCCh
Confidence 36688999999 9999999852 5666666555433222 2347766665554
No 461
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=30.35 E-value=1e+02 Score=27.87 Aligned_cols=75 Identities=19% Similarity=0.096 Sum_probs=44.6
Q ss_pred HHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCC--eEEccc-ccccccccCccccccccCCCCCC
Q 010125 234 PDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGI--WVHVDA-AYAGSACICPEFRHFIDGVEGAD 310 (517)
Q Consensus 234 ~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi--~lhvDa-A~g~~~~~~~~~~~~~~g~~~aD 310 (517)
.+.|++.|++..+++... |++.. +|+-|.++...+|.+..+++.. ...|++ |.+++.+..- .+|
T Consensus 15 ~~~l~~~l~~a~~~~~~~--ivl~i-nspGG~v~~~~~I~~~l~~~~~pvva~V~g~AaSaG~~ia~----------a~d 81 (178)
T cd07021 15 AAFVERALKEAKEEGADA--VVLDI-DTPGGRVDSALEIVDLILNSPIPTIAYVNDRAASAGALIAL----------AAD 81 (178)
T ss_pred HHHHHHHHHHHHhCCCCe--EEEEE-ECcCCCHHHHHHHHHHHHhCCCCEEEEECCchHHHHHHHHH----------hCC
Confidence 445777777766554222 22222 6788999999999999988764 445654 4444433221 455
Q ss_pred eeeeccccccC
Q 010125 311 SFSLNAHKWFF 321 (517)
Q Consensus 311 si~~~~hK~l~ 321 (517)
.+...++=.++
T Consensus 82 ~i~m~p~a~iG 92 (178)
T cd07021 82 EIYMAPGATIG 92 (178)
T ss_pred eEEECCCCeEe
Confidence 55555554444
No 462
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=30.23 E-value=3.1e+02 Score=23.61 Aligned_cols=63 Identities=14% Similarity=0.179 Sum_probs=39.6
Q ss_pred CCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHH
Q 010125 200 QTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCD 274 (517)
Q Consensus 200 ~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~ 274 (517)
..-+.+....+..|. ++..+.+-.+ |.+.|.++|++..+.. =+|+.| |.+..|.-|-..+..+
T Consensus 27 ~n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~~---DliItt-GG~g~g~~D~t~~ai~ 89 (144)
T TIGR00177 27 SNGPLLAALLEEAGF---NVSRLGIVPD-----DPEEIREILRKAVDEA---DVVLTT-GGTGVGPRDVTPEALE 89 (144)
T ss_pred CcHHHHHHHHHHCCC---eEEEEeecCC-----CHHHHHHHHHHHHhCC---CEEEEC-CCCCCCCCccHHHHHH
Confidence 344567777788888 8887765432 6778888887654321 145555 5566777777655443
No 463
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=30.13 E-value=33 Score=33.45 Aligned_cols=32 Identities=25% Similarity=0.280 Sum_probs=27.9
Q ss_pred cCCccccccChhHHHHHHHHhCCeEEcccccc
Q 010125 259 GTTAITAVDPLKPLCDVAKQFGIWVHVDAAYA 290 (517)
Q Consensus 259 gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g 290 (517)
..+..|..++++++++.||++|+.+++|-+..
T Consensus 44 vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 44 VDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp ESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred cccccchhhhhhhhhhccccccceEEEeeecc
Confidence 45567888999999999999999999998653
No 464
>KOG0622 consensus Ornithine decarboxylase [Amino acid transport and metabolism]
Probab=30.01 E-value=2.7e+02 Score=28.80 Aligned_cols=81 Identities=23% Similarity=0.280 Sum_probs=46.9
Q ss_pred CCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccc------
Q 010125 191 SKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAIT------ 264 (517)
Q Consensus 191 ~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G------ 264 (517)
|.-+||++..--.|..+-|..-|+ .+-.+. +...|.+..+...+.. .++-+++--++.+|
T Consensus 123 P~riIyanpcK~~s~IkyAa~~gV---~~~tfD---------ne~el~kv~~~hP~a~--llLrIatdds~a~~~l~~KF 188 (448)
T KOG0622|consen 123 PERIIYANPCKQVSQIKYAAKHGV---SVMTFD---------NEEELEKVAKSHPNAN--LLLRIATDDSTATCRLNLKF 188 (448)
T ss_pred hHHeEecCCCccHHHHHHHHHcCC---eEEeec---------CHHHHHHHHHhCCCce--EEEEEccCCCcccccccCcc
Confidence 555677776667788888888888 665543 2344555544433221 12223333333344
Q ss_pred --cccChhHHHHHHHHhC-----CeEEc
Q 010125 265 --AVDPLKPLCDVAKQFG-----IWVHV 285 (517)
Q Consensus 265 --~idpl~eI~~i~~~~g-----i~lhv 285 (517)
..+.++.|.+.+|+++ +.+||
T Consensus 189 G~~~~~~~~lLd~ak~l~lnvvGvsfHv 216 (448)
T KOG0622|consen 189 GCSLDNCRHLLDMAKELELNVVGVSFHV 216 (448)
T ss_pred CCCHHHHHHHHHHHHHcCceEEEEEEEe
Confidence 2367888888888885 45566
No 465
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=30.00 E-value=1.2e+02 Score=28.50 Aligned_cols=46 Identities=20% Similarity=0.077 Sum_probs=35.8
Q ss_pred HHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeE
Q 010125 237 LMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 237 Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~l 283 (517)
=|.++.=.+-.|..|..|++..-+ ..|..-+.+++.++|++||+.+
T Consensus 154 tEaavdLa~lAgl~P~avi~ei~~-~~G~~~~~~~~~~fA~~~~l~~ 199 (217)
T PRK03353 154 TEATIDLMTLAGLKPAGVLCELTN-DDGTMARAPECIAFAKQHNMPV 199 (217)
T ss_pred hHHHHHHHHHcCCCceEEEEEeec-CCCCcccHHHHHHHHHHcCCcE
Confidence 345555555678888888777644 5688999999999999999988
No 466
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=29.83 E-value=41 Score=32.33 Aligned_cols=30 Identities=17% Similarity=0.148 Sum_probs=23.5
Q ss_pred cccccChhHHHHHHHHhCCeEEcccccccc
Q 010125 263 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 263 ~G~idpl~eI~~i~~~~gi~lhvDaA~g~~ 292 (517)
.|.+.+.+++.++++++++-++|||+|.-.
T Consensus 48 ~G~l~~~~~l~~~l~~~~i~~VIDATHPfA 77 (248)
T PRK08057 48 VGGFGGAEGLAAYLREEGIDLVIDATHPYA 77 (248)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEECCCccH
Confidence 466667788888889999999999988443
No 467
>CHL00073 chlN photochlorophyllide reductase subunit N
Probab=29.46 E-value=93 Score=32.82 Aligned_cols=51 Identities=14% Similarity=0.023 Sum_probs=33.1
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCCccccc-cChhHHHHHHH-HhCCeEEc
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV-DPLKPLCDVAK-QFGIWVHV 285 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i-dpl~eI~~i~~-~~gi~lhv 285 (517)
+-+.|+++|.+..++.. |-+++... |=++|.| |||+.+++-++ ++|+.+++
T Consensus 81 ~~~~L~~~i~ei~~~~~-p~~ifv~~-TC~t~iIGdDle~va~~~~~~~gipVV~ 133 (457)
T CHL00073 81 DYEELKRLCLQIKKDRN-PSVIVWIG-TCTTEIIKMDLEGMAPKLEAEIGIPIVV 133 (457)
T ss_pred CHHHHHHHHHHHHHhCC-CCEEEEEc-cCcHHhhccCHHHHHHHHHHhhCCCEEE
Confidence 44688888888776553 43333222 2234666 99999987665 78987764
No 468
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=29.39 E-value=65 Score=31.90 Aligned_cols=76 Identities=8% Similarity=0.098 Sum_probs=46.4
Q ss_pred CCCCchHHHHHHHH--cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHH
Q 010125 198 SDQTHCALQKAAQI--VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDV 275 (517)
Q Consensus 198 s~~~H~s~~kaa~~--~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i 275 (517)
.-.+|.|+...-.. ..+ .++.+|. ..-++.++++.+. | .+.+|+.+.|....| -.+++.++
T Consensus 54 G~~~y~sv~dlp~~~~~Dl---AvI~vPa------~~v~~al~e~~~~----G-vk~~vIisaGf~e~g---~~~~~~~~ 116 (300)
T PLN00125 54 GLPVFNTVAEAKAETKANA---SVIYVPP------PFAAAAILEAMEA----E-LDLVVCITEGIPQHD---MVRVKAAL 116 (300)
T ss_pred CeeccCCHHHHhhccCCCE---EEEecCH------HHHHHHHHHHHHc----C-CCEEEEECCCCCccc---HHHHHHHH
Confidence 44567777776543 233 4555553 2344555555543 3 235788888887776 34556678
Q ss_pred HHHhCCeEEcccccc
Q 010125 276 AKQFGIWVHVDAAYA 290 (517)
Q Consensus 276 ~~~~gi~lhvDaA~g 290 (517)
|+++|+.++==.+.|
T Consensus 117 ar~~girviGPNc~G 131 (300)
T PLN00125 117 NRQSKTRLIGPNCPG 131 (300)
T ss_pred HhhcCCEEECCCCce
Confidence 999999887555553
No 469
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=29.39 E-value=4.9e+02 Score=24.52 Aligned_cols=101 Identities=12% Similarity=0.099 Sum_probs=61.0
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCC---------CchHHHHHHHHcCCCCCCEEEEecCCCCC
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQ---------THCALQKAAQIVGIDVKNFRAIKTTKSSS 229 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~---------~H~s~~kaa~~~G~g~~~v~~vp~d~~~~ 229 (517)
...+.|||..+++.+..+.+. |.+ ....+.+.++. .+-.....|+.+|+ .++...++. .
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~~------G~e-V~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi---~l~~~~~~g--~ 70 (223)
T COG2102 3 VIALYSGGKDSFYALYLALEE------GHE-VVYLLTVKPENGDSYMFHTPNLELAELQAEAMGI---PLVTFDTSG--E 70 (223)
T ss_pred EEEEEecCcHHHHHHHHHHHc------CCe-eEEEEEEecCCCCeeeeeccchHHHHHHHHhcCC---ceEEEecCc--c
Confidence 357889999997654444332 222 11222222222 22345567788899 888888763 2
Q ss_pred cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc---cChhHHHHHHHHhCCeE
Q 010125 230 YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV---DPLKPLCDVAKQFGIWV 283 (517)
Q Consensus 230 ~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i---dpl~eI~~i~~~~gi~l 283 (517)
..-.+++|.+++..-.-. .| .+|+| +....+-.+|++-|+..
T Consensus 71 ~e~eve~L~~~l~~l~~d-----~i-------v~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 71 EEREVEELKEALRRLKVD-----GI-------VAGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred chhhHHHHHHHHHhCccc-----EE-------EEchhhhHHHHHHHHHHHHHhCCEE
Confidence 245778888888765422 12 24655 45778888999988765
No 470
>PLN02672 methionine S-methyltransferase
Probab=29.32 E-value=5.1e+02 Score=30.71 Aligned_cols=142 Identities=11% Similarity=0.133 Sum_probs=80.8
Q ss_pred cccccccccChhhHHHHHHHHHHHHHHcCCCcccccCCCCceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEE--
Q 010125 119 NIVGFNWISSPAATELENIVMDWLGQMLKLPKSFLFSGNGGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVY-- 196 (517)
Q Consensus 119 n~~~~~~~~sp~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~-- 196 (517)
+.....|+.-.+...+.+.++.+|....+.|-.. .+.++.++-..|+-.++...- ++..++
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 478 (1082)
T PLN02672 416 GLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTP-----DNVVVFPSRAVAIENALRLFS------------PRLAIVDE 478 (1082)
T ss_pred cCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCc-----cceEEeccHHHHHHHHHHhhC------------hHHHhhhh
Confidence 3445677766678889999999999999988552 477888876666644443321 110000
Q ss_pred -eCCCCchHHHHHHHHcCCCC-----CCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChh
Q 010125 197 -GSDQTHCALQKAAQIVGIDV-----KNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLK 270 (517)
Q Consensus 197 -~s~~~H~s~~kaa~~~G~g~-----~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~ 270 (517)
.+..-|..|..+..+-|.+. +.+..+.. + .+-| .+.+.|++- .|-+|+.+......-..--++
T Consensus 479 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~--~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 547 (1082)
T PLN02672 479 HLTRWLPKKWLTSLAIENATSDSKSDDVITVIEA-P---RQSD--LVIELIKKL-----KPQVVVTGMADFEMRTSTAFE 547 (1082)
T ss_pred hhhccCCHHHHhHhhhhcccccCccCCeEEEEeC-C---Ccch--HHHHHHHhC-----CCeEEEEeccchhhhhHHHHH
Confidence 22333445555554444211 12222221 1 1222 455555543 355666555433322334578
Q ss_pred HHHHHHHHhCCeEEcccc
Q 010125 271 PLCDVAKQFGIWVHVDAA 288 (517)
Q Consensus 271 eI~~i~~~~gi~lhvDaA 288 (517)
.|.+++++.|.|+..|-+
T Consensus 548 ~~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 548 HLLNVTAEIGARLFLDIS 565 (1082)
T ss_pred HHHHHHHhhCcEEEEehh
Confidence 899999999999999964
No 471
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=29.12 E-value=37 Score=37.11 Aligned_cols=99 Identities=13% Similarity=0.006 Sum_probs=59.2
Q ss_pred CCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEcccccccc
Q 010125 213 GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGS 292 (517)
Q Consensus 213 G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~ 292 (517)
.+|...|-.+|+.+- .-+ ..=|..+ +-.=++++..|.-++++++++-|+++||-+++|-.++-+
T Consensus 176 elG~T~IELMPv~e~---p~~-----------~sWGYq~--~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 176 ELGITHIELMPVAEH---PGD-----------RSWGYQG--TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred HhCCCEEEEcccccC---CCC-----------CCCCCCc--ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 455567777887642 111 1224555 334457888999999999999999999999999988544
Q ss_pred cccCccccccccCCCCCCee-eeccccccCCCCcceEEEE
Q 010125 293 ACICPEFRHFIDGVEGADSF-SLNAHKWFFATLDCCCLWV 331 (517)
Q Consensus 293 ~~~~~~~~~~~~g~~~aDsi-~~~~hK~l~~p~~~g~l~~ 331 (517)
--.... -..+++ ..+. --|+-|....|++.++...
T Consensus 240 ~~d~~~-L~~fdg---~~~~e~~~~~~~~~~~Wg~~i~~~ 275 (628)
T COG0296 240 PPDGNY-LARFDG---TFLYEHEDPRRGEHTDWGTAIFNY 275 (628)
T ss_pred CCCcch-hhhcCC---ccccccCCcccccCCCcccchhcc
Confidence 321111 111111 1111 1123355667777777665
No 472
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=28.86 E-value=3.4e+02 Score=29.03 Aligned_cols=63 Identities=10% Similarity=0.066 Sum_probs=43.6
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh--CCeEEccccccc
Q 010125 218 NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF--GIWVHVDAAYAG 291 (517)
Q Consensus 218 ~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~--gi~lhvDaA~g~ 291 (517)
+|..++... ..++.+++.+.|.+. .|-+|.+|.- +..+....++++.+|+. ++.+++=|.|+.
T Consensus 39 ~V~iiD~~~---~~~~~~~~~~~l~~~-----~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 39 DVTFLDAMT---GPLTDEKLVERLRAH-----CPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred ceEEecccc---cCCCHHHHHHHHHhc-----CcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 788887542 367888888877653 2446666542 34566778899999987 889988766643
No 473
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=28.85 E-value=60 Score=27.55 Aligned_cols=47 Identities=17% Similarity=0.225 Sum_probs=28.3
Q ss_pred ccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEc
Q 010125 231 GLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 231 ~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhv 285 (517)
+++.+.-++.+++--+ ...| +|+++.|. .|-+++.++|+++++++..
T Consensus 64 ~l~~~~r~~~l~~l~~-~~~P-~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 64 SLDEEERKERLEKLFS-YNPP-CIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp CS-HHHHCCHHHHHCT-TT-S--EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HCCHHHHHHHHHHHhC-CCCC-EEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 5777777777776544 3345 56666554 5789999999999998854
No 474
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=28.48 E-value=4.1e+02 Score=26.31 Aligned_cols=100 Identities=19% Similarity=0.197 Sum_probs=62.7
Q ss_pred CceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchH-----HHHHHHHcCCCCCCEEEEecCCCCCccc
Q 010125 158 GGGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCA-----LQKAAQIVGIDVKNFRAIKTTKSSSYGL 232 (517)
Q Consensus 158 ~~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s-----~~kaa~~~G~g~~~v~~vp~d~~~~~~~ 232 (517)
+..++|.|-|.+.+..+..|++.. .+..||+. .+++. ..|..+-.|+ .+..|+ |
T Consensus 120 g~~IlTh~~S~~v~~~l~~A~~~~---------k~~~V~Vt-ESRP~~eG~~~ak~L~~~gI---~~~~I~-D------- 178 (301)
T COG1184 120 GDVILTHSFSKTVLEVLKTAADRG---------KRFKVIVT-ESRPRGEGRIMAKELRQSGI---PVTVIV-D------- 178 (301)
T ss_pred CCEEEEecCcHHHHHHHHHhhhcC---------CceEEEEE-cCCCcchHHHHHHHHHHcCC---ceEEEe-c-------
Confidence 478999998988888888887651 33556665 34433 3345556677 777665 2
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCCccccc-cC--hhHHHHHHHHhCCeEEcc
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV-DP--LKPLCDVAKQFGIWVHVD 286 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i-dp--l~eI~~i~~~~gi~lhvD 286 (517)
.++...+++..+ +++...+-...|.+ +. --.|+..||+.+.++.|=
T Consensus 179 --sa~~~~~~~vd~------VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~ 227 (301)
T COG1184 179 --SAVGAFMSRVDK------VLVGADAILANGALVNKIGTSPLALAARELRVPFYVV 227 (301)
T ss_pred --hHHHHHHHhCCE------EEECccceecCCcEEeccchHHHHHHHHHhCCCEEEE
Confidence 133444444332 56666555555443 33 357888899999999763
No 475
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.45 E-value=57 Score=32.64 Aligned_cols=61 Identities=25% Similarity=0.310 Sum_probs=43.8
Q ss_pred CHHHHH-HHHHHhHhcCCcceEEEeecc--CCccccccChhHHHHHHHHhC------CeEEcccccccccc
Q 010125 233 SPDSLM-AQINSDVEVGLIPLFLCATIG--TTAITAVDPLKPLCDVAKQFG------IWVHVDAAYAGSAC 294 (517)
Q Consensus 233 d~~~Le-~~i~~~~~~g~~p~~vv~t~g--tt~~G~idpl~eI~~i~~~~g------i~lhvDaA~g~~~~ 294 (517)
|+.++. .+|+...++|.- ++++-|+| .|.....+.|+.|.+++++.. +++..||.-|--.+
T Consensus 205 DpAaVafDAi~~Akar~~D-vvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal 274 (340)
T COG0552 205 DPAAVAFDAIQAAKARGID-VVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNAL 274 (340)
T ss_pred CcHHHHHHHHHHHHHcCCC-EEEEeCcccccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHH
Confidence 555443 555555554433 57889998 777888999999999999875 67777987755443
No 476
>PRK05876 short chain dehydrogenase; Provisional
Probab=28.44 E-value=5.3e+02 Score=24.68 Aligned_cols=44 Identities=2% Similarity=-0.043 Sum_probs=27.2
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccc
Q 010125 218 NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAV 266 (517)
Q Consensus 218 ~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~i 266 (517)
++..+++|- -|.+++++.+++..+....+-+|+-++|....|.+
T Consensus 56 ~~~~~~~Dv-----~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 99 (275)
T PRK05876 56 DVHGVMCDV-----RHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPI 99 (275)
T ss_pred eEEEEeCCC-----CCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 677777763 36778888777654432234467777776554544
No 477
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=28.05 E-value=64 Score=29.06 Aligned_cols=53 Identities=11% Similarity=0.167 Sum_probs=39.7
Q ss_pred cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccccccc
Q 010125 230 YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAYAGSA 293 (517)
Q Consensus 230 ~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~ 293 (517)
|+-|...|.+++.. -++.|.|+.. ...-++.|.+..++.|+.+..|.=++|--
T Consensus 10 GK~D~~~lk~~~d~---------~~I~T~Gs~i--~~~~i~~i~~~~~~rgVIIfTDpD~~Gek 62 (174)
T TIGR00334 10 GKDDQARIKQAFDV---------DVIETNGSAL--KDETINLIKKAQKKQGVIILTDPDFPGEK 62 (174)
T ss_pred cchHHHHHHHhcCc---------eEEEECCCcc--CHHHHHHHHHHhhcCCEEEEeCCCCchHH
Confidence 57899999888742 2667776642 23457888888999999999999887754
No 478
>PLN02331 phosphoribosylglycinamide formyltransferase
Probab=28.01 E-value=4.9e+02 Score=24.15 Aligned_cols=72 Identities=24% Similarity=0.319 Sum_probs=38.1
Q ss_pred EEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHH
Q 010125 161 VIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQ 240 (517)
Q Consensus 161 ~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~ 240 (517)
+++++|| |+.++.-+... +.- ....++++|+.......+.|+-.|+ .+..++......-...-+++.+.
T Consensus 5 l~Sg~Gs--n~~al~~~~~~-----~~l-~~~i~~visn~~~~~~~~~A~~~gI---p~~~~~~~~~~~~~~~~~~~~~~ 73 (207)
T PLN02331 5 FVSGGGS--NFRAIHDACLD-----GRV-NGDVVVVVTNKPGCGGAEYARENGI---PVLVYPKTKGEPDGLSPDELVDA 73 (207)
T ss_pred EEeCCCh--hHHHHHHHHHc-----CCC-CeEEEEEEEeCCCChHHHHHHHhCC---CEEEeccccCCCcccchHHHHHH
Confidence 3444454 88777765432 110 1244555666556666777788899 77766543211112334455555
Q ss_pred HHH
Q 010125 241 INS 243 (517)
Q Consensus 241 i~~ 243 (517)
+++
T Consensus 74 l~~ 76 (207)
T PLN02331 74 LRG 76 (207)
T ss_pred HHh
Confidence 554
No 479
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=27.96 E-value=3.1e+02 Score=28.00 Aligned_cols=71 Identities=18% Similarity=0.220 Sum_probs=36.7
Q ss_pred EEEeCCCCchHHHHHHHH-cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHH
Q 010125 194 IVYGSDQTHCALQKAAQI-VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPL 272 (517)
Q Consensus 194 ~v~~s~~~H~s~~kaa~~-~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI 272 (517)
.|.+.+-......+.+.. .+. ++..+.+|. .|.++|++.+++.. +|+-++|.. . -..|
T Consensus 25 ~v~va~r~~~~~~~~~~~~~~~---~~~~~~~d~-----~~~~~l~~~~~~~d-------vVin~~gp~-~-----~~~v 83 (386)
T PF03435_consen 25 EVTVADRNPEKAERLAEKLLGD---RVEAVQVDV-----NDPESLAELLRGCD-------VVINCAGPF-F-----GEPV 83 (386)
T ss_dssp EEEEEESSHHHHHHHHT--TTT---TEEEEE--T-----TTHHHHHHHHTTSS-------EEEE-SSGG-G-----HHHH
T ss_pred cEEEEECCHHHHHHHHhhcccc---ceeEEEEec-----CCHHHHHHHHhcCC-------EEEECCccc-h-----hHHH
Confidence 344433444333333332 344 788888773 47888998887753 555555543 1 2356
Q ss_pred HHHHHHhCCeEEcc
Q 010125 273 CDVAKQFGIWVHVD 286 (517)
Q Consensus 273 ~~i~~~~gi~lhvD 286 (517)
++.|-++|+. .||
T Consensus 84 ~~~~i~~g~~-yvD 96 (386)
T PF03435_consen 84 ARACIEAGVH-YVD 96 (386)
T ss_dssp HHHHHHHT-E-EEE
T ss_pred HHHHHHhCCC-eec
Confidence 6666666654 244
No 480
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=27.95 E-value=91 Score=31.19 Aligned_cols=20 Identities=25% Similarity=0.473 Sum_probs=16.2
Q ss_pred cChhHHHHHHHHhCCeEEcc
Q 010125 267 DPLKPLCDVAKQFGIWVHVD 286 (517)
Q Consensus 267 dpl~eI~~i~~~~gi~lhvD 286 (517)
.+|....++|+++|+++++-
T Consensus 63 ~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 63 RDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp G-HHHHHHHHHHTT-EEEEE
T ss_pred hhHHHHHHHHHHcCcEEEec
Confidence 68999999999999998875
No 481
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .
Probab=27.46 E-value=5.4e+02 Score=24.40 Aligned_cols=104 Identities=23% Similarity=0.218 Sum_probs=55.4
Q ss_pred ceEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCc----hHHHHHHHHcCCCCCCEEEEecCCCCCcccCH
Q 010125 159 GGVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQTH----CALQKAAQIVGIDVKNFRAIKTTKSSSYGLSP 234 (517)
Q Consensus 159 ~g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H----~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~ 234 (517)
-|++.|||-.+...+..+++.. .... ....+.....+ .-..+.|+.+|+ +...+.++ .
T Consensus 18 v~~~LSGGlDSs~va~~~~~~~------~~~~-~~~~~~~~~~~~~e~~~a~~~a~~l~~---~~~~~~~~--------~ 79 (269)
T cd01991 18 VGVLLSGGLDSSLVAALAARLL------PEPV-KTFSIGFGFEGSDEREYARRVAEHLGT---EHHEVEFT--------P 79 (269)
T ss_pred eEEeecccHHHHHHHHHHHHhh------CCCC-ceEEEeeCCCCCChHHHHHHHHHHhCC---cceEEEcC--------H
Confidence 5899999998877665555432 0001 11122212222 235567788898 77777654 2
Q ss_pred HHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEccccc
Q 010125 235 DSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 235 ~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
+.+.+.+.........|+ .....-++..+++.++++++.++++|-.
T Consensus 80 ~~~~~~~~~~~~~~~~p~---------~~~~~~~~~~l~~~a~~~~~~v~l~G~g 125 (269)
T cd01991 80 ADLLAALPDVIWELDEPF---------ADSSAIPLYLLSRLARKHGIKVVLSGEG 125 (269)
T ss_pred HHHHHHHHHHHHHhCCCC---------CCcHHHHHHHHHHHHHHhCCEEEEecCC
Confidence 333333332211111121 1112246678889999999888887743
No 482
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=27.44 E-value=99 Score=30.27 Aligned_cols=62 Identities=16% Similarity=0.118 Sum_probs=38.6
Q ss_pred EecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHh---CCeEEc
Q 010125 222 IKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQF---GIWVHV 285 (517)
Q Consensus 222 vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~---gi~lhv 285 (517)
-|.+. ++.+|.+.+++.++...+.|..-+++..+.|....=..+.-.+|.+++.++ ++.+++
T Consensus 11 TPf~~--dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 11 TPFNA--DGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp --BET--TSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCC--CcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 34443 568999999999888877776655555565555555556667777776653 355544
No 483
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=27.32 E-value=71 Score=31.41 Aligned_cols=73 Identities=14% Similarity=0.215 Sum_probs=42.8
Q ss_pred CCchHHHHHHHH--cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHH
Q 010125 200 QTHCALQKAAQI--VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAK 277 (517)
Q Consensus 200 ~~H~s~~kaa~~--~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~ 277 (517)
.+|.|+.....- -.+ .++.+|. ..-++.+++.. ++| .+.+|+.+.|-... .-++|.++|+
T Consensus 50 ~~y~sv~dlp~~~~~Dl---avi~vpa------~~v~~~l~e~~----~~G-vk~avIis~Gf~e~----~~~~l~~~a~ 111 (286)
T TIGR01019 50 PVFDSVKEAVEETGANA---SVIFVPA------PFAADAIFEAI----DAG-IELIVCITEGIPVH----DMLKVKRYME 111 (286)
T ss_pred eccCCHHHHhhccCCCE---EEEecCH------HHHHHHHHHHH----HCC-CCEEEEECCCCCHH----HHHHHHHHHH
Confidence 356677665543 233 3444442 22344444444 333 23578888875332 3479999999
Q ss_pred HhCCeEEcccccc
Q 010125 278 QFGIWVHVDAAYA 290 (517)
Q Consensus 278 ~~gi~lhvDaA~g 290 (517)
++|+.++==.+.|
T Consensus 112 ~~girilGPNc~G 124 (286)
T TIGR01019 112 ESGTRLIGPNCPG 124 (286)
T ss_pred HcCCEEECCCCce
Confidence 9999987555553
No 484
>PF06620 DUF1150: Protein of unknown function (DUF1150); InterPro: IPR009531 This entry consists of several hypothetical bacterial proteins of unknown function.
Probab=27.08 E-value=2.2e+02 Score=21.84 Aligned_cols=64 Identities=14% Similarity=0.225 Sum_probs=45.8
Q ss_pred HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 211 IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 211 ~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
+..+|..++.+|. .|+.++|.+.+......| ...+-+..+-.++...+++-+.....+++|++-
T Consensus 8 fa~lg~~~iaYVR-------~v~~~dl~~~~~~~~~~~-~~l~Avh~AdG~~lal~~dR~~Af~~A~q~dl~ 71 (76)
T PF06620_consen 8 FAALGEGRIAYVR-------PVRVDDLPEEFPPQIDPG-ETLYAVHAADGTPLALVDDRDAAFAAARQHDLE 71 (76)
T ss_pred HHhcCCCcEEEEE-------EechHHhhhhcccccCCC-ceEEEEecCCCCEEEEECCHHHHHHHHHHcCCe
Confidence 3344555888886 578888888887444333 445566666666888999999999999998864
No 485
>PF12818 Tegument_dsDNA: dsDNA viral tegument protein; InterPro: IPR024346 This entry represents the N-terminal domain of tegument proteins from double-stranded DNA herpesvirus.
Probab=26.95 E-value=6.1e+02 Score=24.87 Aligned_cols=53 Identities=15% Similarity=0.135 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhHhcCCcc--eEEEeecc-CCcccc-ccChhHHHHHHHHhCCeEEcc
Q 010125 234 PDSLMAQINSDVEVGLIP--LFLCATIG-TTAITA-VDPLKPLCDVAKQFGIWVHVD 286 (517)
Q Consensus 234 ~~~Le~~i~~~~~~g~~p--~~vv~t~g-tt~~G~-idpl~eI~~i~~~~gi~lhvD 286 (517)
.+.+++.|+..-=+-..+ +++|-+.+ .++++. +.|++.|..+|+.+|+.+++=
T Consensus 217 ~~~~~~~i~~~FLNv~~~~vfl~V~n~~~~~~~~~~~~~l~~L~~~c~~~gc~~~iL 273 (282)
T PF12818_consen 217 REHNEEIIKQHFLNVYCSVVFLVVSNTPIDTNTDQGFGPLDALKRACRLCGCPVHIL 273 (282)
T ss_pred HHHHHHHHHhhhhccccceEEEEEecCCCCCcccccccHHHHHHHHHHHCCCCEEEE
Confidence 344777776653222222 33333323 123454 589999999999999998873
No 486
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=26.47 E-value=5.1e+02 Score=25.65 Aligned_cols=59 Identities=15% Similarity=0.189 Sum_probs=41.2
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCcccccc--C-----hhHHHHHHHHhCC--eEEccc
Q 010125 218 NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVD--P-----LKPLCDVAKQFGI--WVHVDA 287 (517)
Q Consensus 218 ~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~id--p-----l~eI~~i~~~~gi--~lhvDa 287 (517)
+|.+.+.| -+|.+.++++++... .+|.+..-..+|+.++ | -+.|+.||++-|+ ++||-+
T Consensus 110 Qvl~~~fd-----~~DedSIr~vvk~sN------VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~GVerfIhvS~ 177 (391)
T KOG2865|consen 110 QVLFMKFD-----LRDEDSIRAVVKHSN------VVINLIGRDYETKNFSFEDVNVHIAERLARICKEAGVERFIHVSC 177 (391)
T ss_pred ceeeeccC-----CCCHHHHHHHHHhCc------EEEEeeccccccCCcccccccchHHHHHHHHHHhhChhheeehhh
Confidence 78888876 469999999987643 2333333355666552 2 3789999999997 778763
No 487
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=26.07 E-value=70 Score=32.57 Aligned_cols=56 Identities=25% Similarity=0.290 Sum_probs=35.7
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCC-ccccccChhHHHHHHHHhCCeEEcccc
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTT-AITAVDPLKPLCDVAKQFGIWVHVDAA 288 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt-~~G~idpl~eI~~i~~~~gi~lhvDaA 288 (517)
+.++.++.|+...+.|..-++-.+..+.. ..-.++.+++|.+.|+++|+.+++|-.
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Dis 68 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADIS 68 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECC
Confidence 67788888888888785544444444432 234457789999999999999999964
No 488
>PF03599 CdhD: CO dehydrogenase/acetyl-CoA synthase delta subunit; InterPro: IPR016041 This entry represents a conserved region predicted to form a TIM alpha/beta barrel, and is found in the delta subunit of a number of CO dehydrogenase/acetyl-CoA synthase enzymes.; PDB: 2H9A_B 2YCL_B 4DJF_E 4DJD_C 4DJE_C.
Probab=25.97 E-value=2.1e+02 Score=29.43 Aligned_cols=43 Identities=30% Similarity=0.465 Sum_probs=27.3
Q ss_pred CHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEc
Q 010125 233 SPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 233 d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhv 285 (517)
|++.|+++++.. ++.+|++-.++. ++.++++++|++||..+.+
T Consensus 107 D~evl~aale~~--~~~kpLL~aAt~--------eNyk~m~~lA~~y~~pl~v 149 (386)
T PF03599_consen 107 DPEVLKAALEAC--AGKKPLLYAATE--------ENYKAMAALAKEYGHPLIV 149 (386)
T ss_dssp HHHHHHHHHHHT--TTS--EEEEEBT--------TTHHHHHHHHHHCT-EEEE
T ss_pred CHHHHHHHHHHh--CcCCcEEeEcCH--------HHHHHHHHHHHHcCCeEEE
Confidence 777888877654 345565544432 4678888888888888765
No 489
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=25.63 E-value=44 Score=35.54 Aligned_cols=30 Identities=23% Similarity=0.180 Sum_probs=26.5
Q ss_pred CCccccccChhHHHHHHHHhCCeEEccccc
Q 010125 260 TTAITAVDPLKPLCDVAKQFGIWVHVDAAY 289 (517)
Q Consensus 260 tt~~G~idpl~eI~~i~~~~gi~lhvDaA~ 289 (517)
.+..|.-++++++++-||++|+.+++|.+.
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 456788899999999999999999999864
No 490
>COG0656 ARA1 Aldo/keto reductases, related to diketogulonate reductase [General function prediction only]
Probab=25.61 E-value=6e+02 Score=24.92 Aligned_cols=66 Identities=18% Similarity=0.161 Sum_probs=42.0
Q ss_pred HHHHHHH-HcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 204 ALQKAAQ-IVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 204 s~~kaa~-~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
...++.. ..+-| .++.|-+. ..+++.|+++++.. +..|.+ -. ....-..+-.++.+.|++||+.
T Consensus 121 etw~alE~l~~~G--~ir~IGVS-----NF~~~~L~~l~~~~---~~~p~~--NQ---Ie~hp~~~q~el~~~~~~~gI~ 185 (280)
T COG0656 121 ETWKALEELVDEG--LIRAIGVS-----NFGVEHLEELLSLA---KVKPAV--NQ---IEYHPYLRQPELLPFCQRHGIA 185 (280)
T ss_pred HHHHHHHHHHhcC--CccEEEee-----CCCHHHHHHHHHhc---CCCCce--EE---EEeccCCCcHHHHHHHHHcCCE
Confidence 3444443 33444 68888885 45889999999872 222321 12 1233445677899999999998
Q ss_pred EE
Q 010125 283 VH 284 (517)
Q Consensus 283 lh 284 (517)
+.
T Consensus 186 v~ 187 (280)
T COG0656 186 VE 187 (280)
T ss_pred EE
Confidence 84
No 491
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=25.54 E-value=52 Score=31.64 Aligned_cols=29 Identities=17% Similarity=0.163 Sum_probs=20.3
Q ss_pred cccccChhHHHHHHHHhCCeEEccccccc
Q 010125 263 ITAVDPLKPLCDVAKQFGIWVHVDAAYAG 291 (517)
Q Consensus 263 ~G~idpl~eI~~i~~~~gi~lhvDaA~g~ 291 (517)
.|.+-+.+++.++|+++++-++||++|.-
T Consensus 49 ~G~lg~~~~l~~~l~~~~i~~vIDATHPf 77 (249)
T PF02571_consen 49 VGRLGDEEGLAEFLRENGIDAVIDATHPF 77 (249)
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEECCCch
Confidence 34444567777788888888888888743
No 492
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=25.24 E-value=6.7e+02 Score=24.78 Aligned_cols=104 Identities=13% Similarity=-0.020 Sum_probs=48.3
Q ss_pred ceEEcCCch-HHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHH
Q 010125 159 GGVIQGTTC-EAILCTLTAARDRVLNKIGRENISKLIVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSL 237 (517)
Q Consensus 159 ~g~~t~ggt-~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~L 237 (517)
-.++|+||+ .+-.+|+..|+.. -.+++.+-......+..-...+.| ++...-+|-. +.+++
T Consensus 40 ~vLITGgg~GlGr~ialefa~rg-----------~~~vl~Din~~~~~etv~~~~~~g--~~~~y~cdis-----~~eei 101 (300)
T KOG1201|consen 40 IVLITGGGSGLGRLIALEFAKRG-----------AKLVLWDINKQGNEETVKEIRKIG--EAKAYTCDIS-----DREEI 101 (300)
T ss_pred EEEEeCCCchHHHHHHHHHHHhC-----------CeEEEEeccccchHHHHHHHHhcC--ceeEEEecCC-----CHHHH
Confidence 467777766 4455666666542 223444433433322222233334 5666666542 44455
Q ss_pred HHHHHHhHhcCCcceEEEeeccCCcccc-ccChhHHHHHHHHhC
Q 010125 238 MAQINSDVEVGLIPLFLCATIGTTAITA-VDPLKPLCDVAKQFG 280 (517)
Q Consensus 238 e~~i~~~~~~g~~p~~vv~t~gtt~~G~-idpl~eI~~i~~~~g 280 (517)
.+..++-+++-..+.++|-++|-.+.=. .+.=++..+-+-+-|
T Consensus 102 ~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN 145 (300)
T KOG1201|consen 102 YRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVN 145 (300)
T ss_pred HHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHh
Confidence 4444444433334556666665433222 233334444444444
No 493
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=25.20 E-value=56 Score=35.61 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=28.4
Q ss_pred cccccChhHHHHHHHHhCCeEEcccccccccc
Q 010125 263 ITAVDPLKPLCDVAKQFGIWVHVDAAYAGSAC 294 (517)
Q Consensus 263 ~G~idpl~eI~~i~~~~gi~lhvDaA~g~~~~ 294 (517)
.|-|.-.+|-.++|++||..++.-+||||+..
T Consensus 167 pgPitt~~EA~eF~k~yG~PvI~KAAyGGGGR 198 (1176)
T KOG0369|consen 167 PGPITTVEEALEFVKEYGLPVIIKAAYGGGGR 198 (1176)
T ss_pred CCCcccHHHHHHHHHhcCCcEEEeecccCCCc
Confidence 37777889999999999999999999999864
No 494
>PRK08265 short chain dehydrogenase; Provisional
Probab=25.05 E-value=5.9e+02 Score=24.01 Aligned_cols=59 Identities=14% Similarity=-0.084 Sum_probs=32.9
Q ss_pred EEEeCCCCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCC
Q 010125 194 IVYGSDQTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTT 261 (517)
Q Consensus 194 ~v~~s~~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt 261 (517)
+++++ .......+.+..++. ++..+++|- .|.+.+++.++...+....+-+++.++|..
T Consensus 33 V~~~~-r~~~~~~~~~~~~~~---~~~~~~~Dl-----~~~~~~~~~~~~~~~~~g~id~lv~~ag~~ 91 (261)
T PRK08265 33 VAIVD-IDADNGAAVAASLGE---RARFIATDI-----TDDAAIERAVATVVARFGRVDILVNLACTY 91 (261)
T ss_pred EEEEe-CCHHHHHHHHHHhCC---eeEEEEecC-----CCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 44444 333334455555554 677787764 367778877776544322343566666643
No 495
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=24.82 E-value=3.4e+02 Score=22.90 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=38.8
Q ss_pred CCchHHHHHHHHcCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHH
Q 010125 200 QTHCALQKAAQIVGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLC 273 (517)
Q Consensus 200 ~~H~s~~kaa~~~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~ 273 (517)
...+.+.+.++..|. +++...+-++ |.+.+++++++..+.. =+|+.+ |.+..|..|-..+..
T Consensus 18 ~~~~~l~~~l~~~G~---~~~~~~~v~D-----d~~~I~~~l~~~~~~~---dliitt-GG~g~g~~D~t~~~l 79 (135)
T smart00852 18 SNGPALAELLTELGI---EVTRYVIVPD-----DKEAIKEALREALERA---DLVITT-GGTGPGPDDVTPEAV 79 (135)
T ss_pred CcHHHHHHHHHHCCC---eEEEEEEeCC-----CHHHHHHHHHHHHhCC---CEEEEc-CCCCCCCCcCcHHHH
Confidence 344567777888888 6666555432 7788888887655421 245544 555567777766643
No 496
>PRK00724 formate dehydrogenase accessory protein; Reviewed
Probab=24.45 E-value=2e+02 Score=27.90 Aligned_cols=65 Identities=20% Similarity=0.287 Sum_probs=43.7
Q ss_pred CchHHHHHHHHc---CCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHH
Q 010125 201 THCALQKAAQIV---GIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAK 277 (517)
Q Consensus 201 ~H~s~~kaa~~~---G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~ 277 (517)
=|.++.|++..+ |+..++...+- .||+..+-+.|++... .|.++..+++|+ .=.++|+
T Consensus 180 RHNAvDKviG~all~g~~~~~~~l~~-----SGR~s~emv~Ka~~aG-----ipvivS~saPT~---------lAVelA~ 240 (263)
T PRK00724 180 RHNALDKLIGAALRAGIPLRDGALLV-----SGRASSEMVQKAAMAG-----IPILVAVSAPTS---------LAVELAE 240 (263)
T ss_pred hhHHHHHHHHHHHHcCCCccCcEEEE-----eCCchHHHHHHHHHcC-----CcEEEEcccchH---------HHHHHHH
Confidence 599999976532 55433333332 4699999999988654 466666655554 3478999
Q ss_pred HhCCeEE
Q 010125 278 QFGIWVH 284 (517)
Q Consensus 278 ~~gi~lh 284 (517)
++|+-|+
T Consensus 241 ~~giTLi 247 (263)
T PRK00724 241 ELGLTLV 247 (263)
T ss_pred HhCCEEE
Confidence 9999884
No 497
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=24.45 E-value=92 Score=30.71 Aligned_cols=72 Identities=14% Similarity=0.188 Sum_probs=41.4
Q ss_pred CCchHHHHHHHH--cCCCCCCEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHH
Q 010125 200 QTHCALQKAAQI--VGIDVKNFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAK 277 (517)
Q Consensus 200 ~~H~s~~kaa~~--~G~g~~~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~ 277 (517)
.+|.|+...-.- -.+ .++.+|. ..-++.|++..+ +| ...+|+.+.|-. ..+-++|.++|+
T Consensus 52 ~~y~sv~dlp~~~~~Dl---Avi~vp~------~~v~~~l~e~~~----~g-vk~avI~s~Gf~----~~~~~~l~~~a~ 113 (291)
T PRK05678 52 PVFNTVAEAVEATGANA---SVIYVPP------PFAADAILEAID----AG-IDLIVCITEGIP----VLDMLEVKAYLE 113 (291)
T ss_pred eccCCHHHHhhccCCCE---EEEEcCH------HHHHHHHHHHHH----CC-CCEEEEECCCCC----HHHHHHHHHHHH
Confidence 345566655543 333 4444542 234455555544 33 235788887742 122248999999
Q ss_pred HhCCeEEccccc
Q 010125 278 QFGIWVHVDAAY 289 (517)
Q Consensus 278 ~~gi~lhvDaA~ 289 (517)
++|+.++==.+.
T Consensus 114 ~~girvlGPNc~ 125 (291)
T PRK05678 114 RKKTRLIGPNCP 125 (291)
T ss_pred HcCCEEECCCCC
Confidence 999999755555
No 498
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=24.44 E-value=4.2e+02 Score=26.55 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=31.2
Q ss_pred eEEcCCchHHHHHHHHHHHHHHHHHhcccCCCCeEEEeCCCC--c------hHHHHHHHHcCCCCCCEEEEecC
Q 010125 160 GVIQGTTCEAILCTLTAARDRVLNKIGRENISKLIVYGSDQT--H------CALQKAAQIVGIDVKNFRAIKTT 225 (517)
Q Consensus 160 g~~t~ggt~a~~~al~~ar~~~~~~~g~~~~~~~~v~~s~~~--H------~s~~kaa~~~G~g~~~v~~vp~d 225 (517)
.+++.|||.+|...-.++--+ ..| =+.+|+++... + ..-....+.+|. +|+.++.+
T Consensus 68 ~vvs~ggs~gN~g~alA~~a~---~~G----l~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA---~v~~v~~~ 131 (337)
T TIGR01274 68 TLVSIGGIQSNQTRQVAAVAA---HLG----MKCVLVQENWVNYSDAVYDRVGNIQLSRIMGA---DVRLDPDG 131 (337)
T ss_pred EEEECCCCcchHHHHHHHHHH---HcC----CcEEEEeccCCCccccchhccchHHHHHHcCC---EEEEeCCc
Confidence 467777776775332222111 113 23556766532 1 234456788899 99988754
No 499
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=24.16 E-value=4.9e+02 Score=22.80 Aligned_cols=52 Identities=23% Similarity=0.321 Sum_probs=36.3
Q ss_pred CEEEEecCCCCCcccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCe
Q 010125 218 NFRAIKTTKSSSYGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIW 282 (517)
Q Consensus 218 ~v~~vp~d~~~~~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~ 282 (517)
++..+..|. .|++.+.+++.... .|+.+.|.+.. ..+..+.+.+.|+++|+.
T Consensus 40 ~~~~~~~d~-----~d~~~~~~al~~~d-------~vi~~~~~~~~-~~~~~~~~~~a~~~~~~~ 91 (183)
T PF13460_consen 40 GVEIIQGDL-----FDPDSVKAALKGAD-------AVIHAAGPPPK-DVDAAKNIIEAAKKAGVK 91 (183)
T ss_dssp TEEEEESCT-----TCHHHHHHHHTTSS-------EEEECCHSTTT-HHHHHHHHHHHHHHTTSS
T ss_pred ccccceeee-----hhhhhhhhhhhhcc-------hhhhhhhhhcc-cccccccccccccccccc
Confidence 677777663 47899999988543 46666655443 366678888888888863
No 500
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=24.00 E-value=1.3e+02 Score=24.87 Aligned_cols=48 Identities=15% Similarity=0.118 Sum_probs=37.5
Q ss_pred cccCHHHHHHHHHHhHhcCCcceEEEeeccCCccccccChhHHHHHHHHhCCeEEc
Q 010125 230 YGLSPDSLMAQINSDVEVGLIPLFLCATIGTTAITAVDPLKPLCDVAKQFGIWVHV 285 (517)
Q Consensus 230 ~~~d~~~Le~~i~~~~~~g~~p~~vv~t~gtt~~G~idpl~eI~~i~~~~gi~lhv 285 (517)
.+|++++|++.+.+..+ .+|+ ||-.+|.+.=.++..+++++.++-+++
T Consensus 47 Hkl~~eEle~~lee~~E-----~ivv---GTG~~G~l~l~~ea~e~~r~k~~~vi~ 94 (121)
T COG1504 47 HKLALEELEELLEEGPE-----VIVV---GTGQSGMLELSEEAREFFRKKGCEVIE 94 (121)
T ss_pred cccCHHHHHHHHhcCCc-----EEEE---ecCceeEEEeCHHHHHHHHhcCCeEEE
Confidence 48999999999997754 2333 455678888889999999999976654
Done!