Query 010126
Match_columns 517
No_of_seqs 253 out of 1812
Neff 7.6
Searched_HMMs 29240
Date Mon Mar 25 20:28:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010126.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010126hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 2E-102 6E-107 878.2 39.3 450 1-512 190-834 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 1E-102 5E-107 866.8 37.0 467 1-513 201-711 (713)
3 2x41_A Beta-glucosidase; hydro 100.0 2E-101 8E-106 861.5 33.5 445 1-512 207-711 (721)
4 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 3.1E-71 1E-75 616.5 23.9 331 1-377 259-619 (822)
5 1x38_A Beta-D-glucan exohydrol 100.0 2.8E-70 9.6E-75 599.7 26.5 332 1-372 250-601 (602)
6 3bmx_A Uncharacterized lipopro 100.0 1.5E-62 5.2E-67 541.6 20.4 320 1-374 267-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 2.4E-35 8.2E-40 314.8 14.9 267 1-315 241-523 (535)
8 3tev_A Glycosyl hyrolase, fami 99.9 4.5E-24 1.5E-28 218.0 6.6 107 1-115 223-340 (351)
9 4g6c_A Beta-hexosaminidase 1; 99.7 1.5E-19 5.2E-24 184.2 0.8 96 1-105 221-322 (348)
10 2oxn_A Beta-hexosaminidase; TI 99.7 7.5E-19 2.6E-23 178.7 -3.0 94 1-100 204-303 (340)
11 4gvf_A Beta-hexosaminidase; TI 99.7 1.5E-18 5E-23 176.8 -2.9 95 1-101 210-310 (349)
12 3idu_A Uncharacterized protein 96.8 0.0056 1.9E-07 52.9 9.4 50 417-475 34-84 (127)
13 2kut_A Uncharacterized protein 96.3 0.0031 1.1E-07 54.0 4.1 55 417-475 17-73 (122)
14 2l0d_A Cell surface protein; s 96.1 0.024 8.2E-07 47.9 8.7 61 417-499 20-82 (114)
15 3isy_A Bsupi, intracellular pr 93.7 0.46 1.6E-05 40.3 10.0 67 417-499 19-99 (120)
16 4ep8_B Urease subunit beta; al 90.9 0.4 1.4E-05 38.8 5.7 51 418-472 20-82 (101)
17 4ac7_B Urease subunit beta; hy 88.3 0.86 3E-05 38.4 5.9 51 418-472 26-88 (126)
18 4ubp_B Protein (urease (chain 88.3 0.86 3E-05 38.4 5.9 51 418-472 26-88 (126)
19 3fsa_A Azurin; copper, cupredo 87.4 0.85 2.9E-05 38.9 5.6 55 419-474 28-100 (125)
20 2x3c_A Toxic extracellular end 86.7 1.8 6E-05 43.6 8.4 62 417-480 37-116 (343)
21 2e6j_A Hydin protein; PAPD, st 86.5 2.7 9.2E-05 34.4 8.2 62 417-484 27-88 (112)
22 1cuo_A Protein (azurin ISO-2); 84.6 1.6 5.6E-05 37.4 6.0 55 419-474 28-100 (129)
23 1yew_A Particulate methane mon 84.4 2.8 9.7E-05 41.8 8.3 55 417-475 265-336 (382)
24 1w8o_A Bacterial sialidase; 3D 84.3 2.2 7.7E-05 45.8 8.5 102 360-501 337-440 (601)
25 2iaa_C Azurin; quinoprotein, t 82.1 2.4 8.1E-05 36.3 6.0 55 419-474 27-99 (128)
26 1nwp_A Azurin; electron transp 81.2 2.4 8.2E-05 36.2 5.7 55 419-474 28-100 (128)
27 2ccw_A Azurin II, AZN-2; elect 79.3 3.4 0.00012 35.3 6.1 15 460-474 86-100 (129)
28 2ys4_A Hydrocephalus-inducing 78.8 4 0.00014 34.2 6.4 57 417-484 42-98 (122)
29 3qga_A UREA2, fusion of urease 76.2 3.5 0.00012 38.2 5.4 51 418-472 125-187 (225)
30 3kmh_A D-lyxose isomerase; cup 75.2 3.7 0.00013 38.7 5.4 57 423-485 130-196 (246)
31 1e9y_A Urease subunit alpha; h 74.6 3.2 0.00011 38.7 4.8 51 419-473 126-188 (238)
32 3rfr_A PMOB; membrane, oxidore 68.5 6.8 0.00023 39.5 5.9 53 417-475 299-368 (419)
33 1xf1_A C5A peptidase, SCP; hyd 64.2 7.2 0.00025 44.5 5.9 58 417-475 500-564 (926)
34 3qbt_B Inositol polyphosphate 63.6 22 0.00077 30.5 7.7 56 417-475 44-100 (140)
35 3ay2_A Lipid modified azurin p 56.6 9.6 0.00033 34.1 4.1 15 460-474 125-139 (167)
36 2lv4_A Putative outer membrane 52.3 44 0.0015 28.1 7.0 66 448-514 47-134 (146)
37 3qis_A Inositol polyphosphate 52.1 42 0.0014 33.7 8.5 56 417-475 47-103 (366)
38 4dzg_A PLIG; lysozyme inhibito 51.3 16 0.00055 30.3 4.4 16 487-502 77-95 (114)
39 2qsv_A Uncharacterized protein 51.0 84 0.0029 28.8 9.9 52 417-479 20-72 (220)
40 4hs4_A Chromate reductase; tri 49.9 25 0.00085 32.0 6.0 52 214-276 62-118 (199)
41 1g43_A Scaffolding protein; be 49.8 6.4 0.00022 34.9 1.8 35 454-489 97-133 (160)
42 4hci_A Cupredoxin 1; structura 49.3 44 0.0015 26.3 6.8 26 458-499 60-85 (100)
43 4g9s_B Inhibitor of G-type lys 48.4 39 0.0013 27.6 6.4 25 489-513 78-111 (111)
44 4b9f_A Cellulosomal-scaffoldin 48.0 9.9 0.00034 33.4 2.7 36 454-490 94-129 (152)
45 2qsv_A Uncharacterized protein 47.0 28 0.00097 32.1 5.9 51 417-475 135-185 (220)
46 1qhq_A Protein (auracyanin); e 46.7 37 0.0013 28.7 6.2 26 459-500 98-123 (140)
47 4ay0_A Chaperone protein CAF1M 46.6 61 0.0021 30.0 8.1 55 419-475 29-84 (218)
48 3hrz_B Cobra venom factor; ser 46.3 99 0.0034 29.1 9.8 57 417-475 97-154 (252)
49 2cal_A Rusticyanin; iron respi 45.9 43 0.0015 29.1 6.6 64 419-500 70-138 (154)
50 3q48_A Chaperone CUPB2; IG fol 45.5 73 0.0025 30.3 8.7 54 419-474 45-102 (257)
51 3zqx_A Cellulose 1,4-beta-cell 44.9 5.8 0.0002 34.7 0.7 36 454-490 81-117 (146)
52 3lcm_A SMU.1420, putative oxid 44.9 34 0.0012 30.8 6.0 55 214-279 62-131 (196)
53 1iby_A Nitrosocyanin; RED copp 42.7 40 0.0014 27.1 5.6 41 419-475 47-87 (112)
54 3p0r_A Azoreductase; structura 41.2 31 0.0011 31.5 5.2 54 216-280 83-151 (211)
55 2hpv_A FMN-dependent NADH-azor 41.0 32 0.0011 31.0 5.2 38 215-263 84-121 (208)
56 3e9t_A Na/Ca exchange protein; 40.3 90 0.0031 25.5 7.4 52 419-475 20-76 (114)
57 4gy7_A Urease; JACK bean, hydr 39.3 26 0.00088 39.4 5.0 52 417-472 150-213 (840)
58 1t5b_A Acyl carrier protein ph 39.1 41 0.0014 29.7 5.6 36 217-263 78-113 (201)
59 3zuc_A Cellulosomal scaffoldin 37.9 12 0.0004 33.0 1.5 36 454-490 89-126 (153)
60 1rli_A Trp repressor binding p 37.2 57 0.0019 28.4 6.2 38 215-263 61-98 (184)
61 3u7i_A FMN-dependent NADH-azor 37.1 43 0.0015 31.0 5.5 37 216-263 85-121 (223)
62 3ead_A Na/Ca exchange protein; 37.0 1.2E+02 0.0039 25.7 7.8 52 419-475 22-78 (137)
63 3ha2_A NADPH-quinone reductase 34.2 70 0.0024 28.4 6.2 57 213-280 39-105 (177)
64 3svl_A Protein YIEF; E. coli C 34.2 69 0.0024 28.7 6.3 41 213-264 60-100 (193)
65 2l8a_A Endoglucanase; carbohyd 34.0 9.4 0.00032 33.4 0.3 36 454-490 86-122 (149)
66 2q3z_A Transglutaminase 2; tra 33.6 61 0.0021 35.4 6.6 57 417-475 488-548 (687)
67 3fvw_A Putative NAD(P)H-depend 33.0 66 0.0023 28.7 5.9 39 214-263 56-94 (192)
68 1rtt_A Conserved hypothetical 32.1 37 0.0013 30.1 4.0 39 214-263 61-99 (193)
69 3k1y_A Oxidoreductase; structu 31.1 53 0.0018 29.6 4.9 52 213-275 73-126 (191)
70 2hr0_B Complement C3 alpha' ch 30.6 1.8E+02 0.0063 32.7 10.3 57 417-475 96-154 (915)
71 1d4a_A DT-diaphorase, quinone 30.5 66 0.0022 30.6 5.7 55 214-279 82-151 (273)
72 2co7_B SAFB chaperone, putativ 29.9 1.3E+02 0.0046 27.7 7.5 52 419-475 29-82 (221)
73 1vjj_A Protein-glutamine gluta 29.1 91 0.0031 34.0 7.0 57 417-475 497-556 (692)
74 3fso_A Integrin beta-4, GP150; 28.4 1.8E+02 0.0062 24.0 7.5 52 419-475 23-79 (123)
75 1sqs_A Conserved hypothetical 28.2 82 0.0028 29.0 5.9 55 214-279 68-128 (242)
76 3f2v_A General stress protein 28.2 74 0.0025 28.7 5.3 56 214-280 47-113 (192)
77 2aan_A Auracyanin A; cupredoxi 28.0 47 0.0016 27.9 3.8 27 458-500 98-124 (139)
78 1eiw_A Hypothetical protein MT 27.9 48 0.0016 27.3 3.6 76 221-318 34-110 (111)
79 1g0d_A Protein-glutamine gamma 27.6 95 0.0032 33.9 6.8 57 417-475 487-546 (695)
80 4djm_A DRAB; chaperone, PILI; 27.4 1.8E+02 0.006 27.2 8.0 51 419-474 39-91 (239)
81 3o0l_A Uncharacterized protein 27.3 2.5E+02 0.0087 22.8 10.4 57 417-475 39-96 (112)
82 2amj_A Modulator of drug activ 27.0 1.5E+02 0.005 26.7 7.2 39 214-263 59-97 (204)
83 1ex0_A Coagulation factor XIII 26.6 95 0.0033 34.1 6.6 57 417-475 532-591 (731)
84 3u7r_A NADPH-dependent FMN red 26.3 1.1E+02 0.0036 27.6 6.0 39 214-263 56-94 (190)
85 2xwx_A GBPA, glcnac-binding pr 26.3 1.8E+02 0.0063 29.3 8.3 61 417-501 312-372 (391)
86 3r6w_A FMN-dependent NADH-azor 25.0 1E+02 0.0034 27.7 5.7 37 216-263 78-114 (212)
87 3tem_A Ribosyldihydronicotinam 24.9 1.1E+02 0.0036 28.3 5.9 55 214-279 81-150 (228)
88 3vmn_A Dextranase; TIM barrel, 24.9 82 0.0028 34.0 5.6 56 417-479 23-82 (643)
89 2pn5_A TEP1R, thioester-contai 24.7 2.7E+02 0.0093 32.7 10.7 62 417-479 681-744 (1325)
90 4fxk_B Complement C4-A alpha c 24.3 74 0.0025 35.1 5.4 55 417-475 169-224 (767)
91 3gin_A Sodium/calcium exchange 24.1 2.1E+02 0.0073 24.8 7.4 52 419-475 40-97 (160)
92 2gim_A Plastocyanin; beta shee 23.9 65 0.0022 25.3 3.7 30 456-500 62-91 (106)
93 2xbt_A Cellulosomal scaffoldin 23.7 30 0.001 30.6 1.6 34 454-488 91-131 (160)
94 4h7p_A Malate dehydrogenase; s 22.5 27 0.00093 34.8 1.3 56 221-282 96-155 (345)
95 3rpe_A MDAB, modulator of drug 21.1 2.2E+02 0.0075 26.1 7.2 40 214-264 72-111 (218)
96 3vku_A L-LDH, L-lactate dehydr 20.9 46 0.0016 32.9 2.5 57 221-282 72-130 (326)
97 2q62_A ARSH; alpha/beta, flavo 20.4 97 0.0033 29.1 4.7 38 214-262 87-124 (247)
98 2x0j_A Malate dehydrogenase; o 20.0 24 0.00081 34.4 0.2 56 222-282 66-123 (294)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=1.6e-102 Score=878.15 Aligned_cols=450 Identities=30% Similarity=0.448 Sum_probs=385.8
Q ss_pred CCCccCCCCccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCch---hH-HHH
Q 010126 1 MCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP---FL-AIH 76 (517)
Q Consensus 1 M~sYn~ing~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~---~~-~~~ 76 (517)
|||||+|||+|||+|++||++|||+||||+|+|||||++|. ++++||+||+||+|+. .+ .+.
T Consensus 190 M~syn~ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~--------------~~~~Al~AG~D~~m~~~~~~~~~~~ 255 (845)
T 3abz_A 190 MTAYNKVNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTY--------------TTAAAIKNGLDIEFPGPTRWRTRAL 255 (845)
T ss_dssp EECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCC--------------CSHHHHHHTCCBBCSSSCSSCCHHH
T ss_pred EecCCCcCCEeccCCHHHHHHHHhhccCCCeEEEcccccHH--------------HHHHHHHcCCCcccCCchhhhHHHH
Confidence 99999999999999999999999999999999999998763 2378999999999962 22 348
Q ss_pred HHHHHHCCC-CCHHHHHHHHHHHHHHHHHhc----CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhcCceeeccCCCc
Q 010126 77 TEGAVRGGL-LREEDVNLALAYTITVQMRLG----MFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSART 151 (517)
Q Consensus 77 l~~av~~g~-i~~~~id~sv~RIL~~K~~~G----l~~~~p~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~ 151 (517)
|.+||++|. +++++||+||+|||++|+++| +|+ +|...+ ....+++++|+++|+++|++|||||||++++
T Consensus 256 l~~av~~G~~i~~~~id~av~RIL~~k~~~g~l~~~~~-~p~~~~----~~~~~~~~~~~~la~~~a~~sivLLKN~~~~ 330 (845)
T 3abz_A 256 VSHSLNSREQITTEDVDDRVRQVLKMIKFVVDNLEKTG-IVENGP----ESTSNNTKETSDLLRKIAADSIVLLKNKNNI 330 (845)
T ss_dssp HHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHTHHHHC-CCTTCC----CCCTTCSHHHHHHHHHHHHHHCEEEEECTTC
T ss_pred HHHHHHcCccchHHHHHHHHHHHHHHHHHhCCcccccc-CCccCc----cccccCCHHHHHHHHHHHHhCcEEeccCCcc
Confidence 999999999 999999999999999999999 898 554221 1223789999999999999999999999999
Q ss_pred cCccCCCCCeEEEECCCCCccccccccccc-cCCccCCHHHHHHhhhc--eeeeccCCcc--------------------
Q 010126 152 LPLSTLRHHTVAVIGPNSDVTVTMIGNYAG-VACGYTTPLQGISRYAK--TIHQAGCFGV-------------------- 208 (517)
Q Consensus 152 LPL~~~~~~~v~vig~~a~~~~~~~G~~~~-~~~~~~s~~~~l~~~~~--~~y~~g~~~~-------------------- 208 (517)
|||++ .+||+||||+++....++|+++. .+.+.++++++|++... +.|..||...
T Consensus 331 LPL~~--~~~iaviGp~A~~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g 408 (845)
T 3abz_A 331 LPLKK--EDNIIVIGPNAKAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADA 408 (845)
T ss_dssp CSCCT--TSCEEEESTTTSCCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCT
T ss_pred cCCCC--CCEEEEEcCCcchhhccCCCccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccC
Confidence 99976 37999999999988766666543 46778999999998742 4455444200
Q ss_pred ----------------c---------------------------------------------------------------
Q 010126 209 ----------------A--------------------------------------------------------------- 209 (517)
Q Consensus 209 ----------------~--------------------------------------------------------------- 209 (517)
.
T Consensus 409 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~ 488 (845)
T 3abz_A 409 ENSGLIAKFYSNPVEERSDDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFY 488 (845)
T ss_dssp TTBSEEEEEESSCTTTSCTTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEE
T ss_pred CCCceEEEEeccCcccCcccccceeeeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEE
Confidence 0
Q ss_pred --------------------------------------------c------------------------CC-cccHHHHH
Q 010126 210 --------------------------------------------C------------------------NG-NQLIGAAE 220 (517)
Q Consensus 210 --------------------------------------------~------------------------~~-~~~~~~a~ 220 (517)
. .+ ...+++|+
T Consensus 489 idg~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av 568 (845)
T 3abz_A 489 LNDELIIDQKHNQERGSFCFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAA 568 (845)
T ss_dssp ETTEEEEEESSSCCBCSTTTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHH
T ss_pred ECCEEEeeccccccccccccccCcccceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHH
Confidence 0 00 12367788
Q ss_pred HHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHHhCCCCEEEEEecCceeeccCcCCCCCccEEEEecCC
Q 010126 221 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYP 300 (517)
Q Consensus 221 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~~~~~pvVvVl~~g~Py~l~~~~~~~~v~ail~a~~~ 300 (517)
++|++||+|||++|.+...++||.||.+|.||+.|.+||++|+++ ++|+|||+++|+|++|+|+ ++++|||++|+|
T Consensus 569 ~~A~~ADvvVv~vG~~~~~e~Eg~DR~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~---~~v~AIL~aw~p 644 (845)
T 3abz_A 569 ELAAKHDKAVLIIGLNGEWETEGYDRENMDLPKRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWL---EDANALVQAWYG 644 (845)
T ss_dssp HHHHTSSEEEEEEECCTTTSBTTBCCSSSCCCTTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTG---GGCSEEEECCCC
T ss_pred HHHhcCCEEEEEEecCCccccccCCcccccCCHHHHHHHHHHHHh-CCCEEEEEeCCCcccCcch---hccCeEEEcCCC
Confidence 999999999999999999999999999999999999999999974 6799999999999999998 479999999999
Q ss_pred CchhHHHHHHHHccCCCCCccccceeccccccCCCCcccccccc---cCCCCC---CccccCC---CCccccCCcCCCCC
Q 010126 301 GQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRA---ARGYPG---RTYRFYK---GPVVFPFGHGMSYT 371 (517)
Q Consensus 301 g~~~~~A~advL~G~~~PsGkLPvT~~p~~~~~~~p~~~~~~~~---~~~~~~---~~Yr~~~---~~~~ypFG~GLSYT 371 (517)
||++|+|+||||||++|||||||+|| |++. +|+|.++ ++.. ...|.+ .+||||+ .+|+||||||||||
T Consensus 645 GqegG~AiAdVLfG~vNPSGkLP~T~-p~~~-~d~P~~~-~~~~~~g~~~y~eg~~vgYR~y~~~~~~plfPFG~GLSYT 721 (845)
T 3abz_A 645 GNELGNAIADVLYGDVVPNGKLSLSW-PFKL-QDNPAFL-NFKTEFGRVIYGEDIFVGYRYYEKLQRKVAFPFGYGLSYT 721 (845)
T ss_dssp CTTHHHHHHHHHTTSSCCCCCCSSCB-CSSG-GGSTTTT-SCSCBTTEEECTTTTCCTHHHHHHHTCCCSBCTTCCBCSS
T ss_pred cHHHHHHHHHHhcCCcCCCCCCceee-eCch-hhCCccc-cCCCCCCceeccCCccCCCcchhcCCCceeecccCCCcce
Confidence 99999999999999999999999997 8887 7788642 2211 111222 3699997 57999999999999
Q ss_pred CceeC--CCcCCCCcccccccccccccccccccccccccccCCCCCeeEEEEEEEEecC-CcCcceEEEEEeeCCCCC-C
Q 010126 372 TFAHT--LSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTG-DMAGTHTLLVFAKPPAGN-W 447 (517)
Q Consensus 372 tf~~s--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~V~NtG-~~~G~evvQlY~~~~~~~-~ 447 (517)
||+|+ ++++. +. .++|+|+||||| +++|+||||||+++|.++ .
T Consensus 722 tF~ys~~~l~v~--------------------------------~~-~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~ 768 (845)
T 3abz_A 722 TFELDISDFKVT--------------------------------DD-KIAISVDVKNTGDKFAGSEVVQVYFSALNSKVS 768 (845)
T ss_dssp CEEEEEEEEEEC--------------------------------SS-EEEEEEEEEECCSSCCEEEEEEEEEEESSCSSC
T ss_pred eEEEeccccccc--------------------------------CC-eEEEEEEEEECCcCCCcceeeeeeEeCCCCCcc
Confidence 99999 88731 11 689999999999 999999999999999887 8
Q ss_pred CccccccccceeeecCCCeeEEEEEeC-CCCCceEEeCC-CcEEecCeEEEEEEeCCCceEEEEEEE
Q 010126 448 SPNKQLIGFKKVHVTAGALQSVRLDIH-VCKHLSVVDKF-GIRRIPMGEHSLHIGDLKHSISLQANL 512 (517)
Q Consensus 448 ~P~k~L~gF~kv~l~pGes~~v~~~~~-~~~~~~~~d~~-~~~~~~~G~y~~~vg~ss~~~~~~~~~ 512 (517)
+|.|+|+||+||+|+||||++|+|+|+ . ++|++||+. +.|++|+|+|+|+||.||+|++++.++
T Consensus 769 ~P~k~L~gF~kv~L~pGes~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG~ss~di~l~~~~ 834 (845)
T 3abz_A 769 RPVKELKGFEKVHLEPGEKKTVNIDLELK-DAISYFNEELGKWHVEAGEYLVSVGTSSDDILSVKEF 834 (845)
T ss_dssp CCSCEEEEEEEEEECTTCEEEEEEEEEHH-HHHCEEETTTTEEEECSEEEEEEEESSTTCEEEEEEE
T ss_pred hhhheeccceeEEECCCCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEECCCCCceeEEEE
Confidence 999999999999999999999999999 8 999999996 799999999999999999998876544
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=1.4e-102 Score=866.80 Aligned_cols=467 Identities=24% Similarity=0.355 Sum_probs=376.4
Q ss_pred CCCccCCCCccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCchh--------
Q 010126 1 MCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPF-------- 72 (517)
Q Consensus 1 M~sYn~ing~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~-------- 72 (517)
|||||+|||+|||+|+++|++|||+||||+|+|||||+++. ++++|++||+||+|.+.
T Consensus 201 M~syn~vng~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a~~--------------~~~~ai~AG~D~~m~~~~~~~~~~~ 266 (713)
T 3zyz_A 201 MCSYNKVNTTWACEDQYTLQTVLKDQLGFPGYVMTDWNAQH--------------TTVQSANSGLDMSMPGTDFNGNNRL 266 (713)
T ss_dssp EECSSEETTEEGGGCHHHHCCCCCCCSCCCSEEEESTTCCC--------------CSHHHHHHTCCBBSSSSCTTSCCCC
T ss_pred EeeccccCCccCcCCHHHHHHHHHHHcCCCEEEEecCccHH--------------HHHHHHHcCCCEeCCCCcccchhHH
Confidence 99999999999999999999999999999999999998752 24789999999999632
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhcCceeeccCCCcc
Q 010126 73 LAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTL 152 (517)
Q Consensus 73 ~~~~l~~av~~g~i~~~~id~sv~RIL~~K~~~Gl~~~~p~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~L 152 (517)
+.+.|.+||++|.|++++||+||+|||++|+++|+|+ ++... .. .....+++|+++++++|++|||||||++++|
T Consensus 267 ~~~~l~~av~~G~i~~~~id~av~RIL~~k~~lg~~~-~~~~~--~~--~~~~~~~~h~~la~~~a~~sivLLKN~~~~L 341 (713)
T 3zyz_A 267 WGPALTNAVNSNQVPTSRVDDMVTRILAAWYLTGQDQ-AGYPS--FN--ISRNVQGNHKTNVRAIARDGIVLLKNDANIL 341 (713)
T ss_dssp STHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTS-TTCCC--CC--TTSCCCTTTHHHHHHHHHHTCEEEEEGGGCC
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhCCcc-cCCCC--cc--cccccCHHHHHHHHHhhhcceEEEccCCCcc
Confidence 3478999999999999999999999999999999997 44321 11 1122378999999999999999999999999
Q ss_pred CccCCCCCeEEEECCCCCccc-----------------cccccccc--cCCccCCHHHHHHhhhceeeeccCCccccCCc
Q 010126 153 PLSTLRHHTVAVIGPNSDVTV-----------------TMIGNYAG--VACGYTTPLQGISRYAKTIHQAGCFGVACNGN 213 (517)
Q Consensus 153 PL~~~~~~~v~vig~~a~~~~-----------------~~~G~~~~--~~~~~~s~~~~l~~~~~~~y~~g~~~~~~~~~ 213 (517)
||++. ++|+||||++.... ...|++++ .+++.++++++|++.... .|+... ....
T Consensus 342 PL~~~--~~IaViG~~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~---~g~~v~-~~~~ 415 (713)
T 3zyz_A 342 PLKKP--ASIAVVGSAAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASS---QGTQVT-LSNT 415 (713)
T ss_dssp SCCCC--SEEEEESGGGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHT---TTCEEE-EECS
T ss_pred ccCCC--CEEEEECCCccccccccccccccccccccCceecccCCCCcCcCCCCCHHHHHHHHhcc---CCeEEE-EeCC
Confidence 99864 79999999986421 11222222 455678999999986421 011000 0012
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccC--------CCCCCCCChhHHHHHHHHHHhCCCCEEEEEecCceeec-cC
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFI--------DRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDV-SF 284 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~--------Dr~~l~l~~~q~~li~~l~~~~~~pvVvVl~~g~Py~l-~~ 284 (517)
..+++++++++++|++|+++|.. ++||. ||.+|.||+.|.+||++|++. ++|+|||+++|+|++| +|
T Consensus 416 ~~~~~a~~~A~~aDv~Iv~vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w 491 (713)
T 3zyz_A 416 DNTSSGASAARGKDVAIVFITAD---SGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQI 491 (713)
T ss_dssp CCHHHHHHHHTTCSEEEEEEEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHH
T ss_pred ccHHHHHHHhhcCCEEEEEeccc---CCCCccccccCCCCcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhh
Confidence 35788999999999999999853 46666 999999999999999999974 6899999999999999 67
Q ss_pred cCCCCCccEEEEecCCCchhHHHHHHHHccCCCCCccccceeccccccCCCCcccccccccCCCCC---CccccCCC---
Q 010126 285 AKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPG---RTYRFYKG--- 358 (517)
Q Consensus 285 ~~~~~~v~ail~a~~~g~~~~~A~advL~G~~~PsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~---~~Yr~~~~--- 358 (517)
+ +.++++|||++|+||+++|+|+||||||++|||||||+|| |++. +|+|... ++.+...|.+ .+||||+.
T Consensus 492 ~-~~~~v~Ail~aw~pGqegG~AiAdvL~G~~nPSGkLP~T~-p~~~-~d~p~~~-~~~~~~~y~eg~~vgYRy~d~~~~ 567 (713)
T 3zyz_A 492 L-ALPQVKAVVWAGLPSQESGNALVDVLWGDVSPSGKLVYTI-AKSP-NDYNTRI-VSGGSDSFSEGLFIDYKHFDDANI 567 (713)
T ss_dssp H-TCTTEEEEEECCCCGGGHHHHHHHHHTTSSCCCCCCSSCB-CSCG-GGSSCCC-CCSSEECCTTTTCCHHHHHHHTTC
T ss_pred h-hccccCEEEEcCCCCchhhheehhhhcCCcCCCccCccee-cCCh-hhCCCcc-ccCCccccCCCCccCceeccCCCC
Confidence 6 3468999999999999999999999999999999999997 8877 7788431 1111223432 47999985
Q ss_pred CccccCCcCCCCCCceeCCCcCCCCcccccccccccccccccccccccccccCCCCCeeEEEEEEEEecCCcCcceEEEE
Q 010126 359 PVVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTGDMAGTHTLLV 438 (517)
Q Consensus 359 ~~~ypFG~GLSYTtf~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~V~NtG~~~G~evvQl 438 (517)
+|+||||||||||||+|+++++.... +.... + .....-+..++.+. .++|+|+|||||+++|+|||||
T Consensus 568 ~plypFG~GLSYTtF~ys~l~~~~~~-~~~~~--------~--~~~~~gg~~~~~~~-~~~vsv~VtNtG~~~G~EVvQl 635 (713)
T 3zyz_A 568 TPRYEFGYGLSYTKFNYSRLSVLSTA-KSGPA--------T--GAVVPGGPSDLFQN-VATVTVDIANSGQVTGAEVAQL 635 (713)
T ss_dssp CCSBCTTCCBCSSCEEEEEEEEEECC-CCEEC--------C--SCEETTEETTTTSE-EEEEEEEEEECSSSCEEEEEEE
T ss_pred ceeecCCCCCCcccEEEeeeEecccc-ccCcc--------c--ccccccccccccCC-eEEEEEEEEeCCCCccceeeee
Confidence 79999999999999999999864210 00000 0 00000000011122 6999999999999999999999
Q ss_pred EeeCCCCC-CCccccccccceeeecCCCeeEEEEEeCCCCCceEEeCC-CcEEecCeEEEEEEeCCCceEEEEEEEc
Q 010126 439 FAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF-GIRRIPMGEHSLHIGDLKHSISLQANLE 513 (517)
Q Consensus 439 Y~~~~~~~-~~P~k~L~gF~kv~l~pGes~~v~~~~~~~~~~~~~d~~-~~~~~~~G~y~~~vg~ss~~~~~~~~~~ 513 (517)
|+++|.++ .+|.|+|+||+||+|+||||++|+|+|++ ++|++||+. ++|++|+|+|+|+||.||+|++++.+++
T Consensus 636 Yv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~ve~G~y~v~vG~sS~d~~l~~~~~ 711 (713)
T 3zyz_A 636 YITYPSSAPRTPPKQLRGFAKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWVVPSGSFGISVGASSRDIRLTSTLS 711 (713)
T ss_dssp EEECCTTSSSCCSCEEEEEEEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEEECCEEEEEEEESSSSCEEEEEEEE
T ss_pred eeecCCCCCCchhHHhhhcccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEEEcCceEEEEEECCCCCcceeEEEE
Confidence 99999887 89999999999999999999999999998 999999985 7999999999999999999999887653
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=2.3e-101 Score=861.45 Aligned_cols=445 Identities=27% Similarity=0.404 Sum_probs=377.6
Q ss_pred CCCccCCCCccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCch--hH-----
Q 010126 1 MCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP--FL----- 73 (517)
Q Consensus 1 M~sYn~ing~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~--~~----- 73 (517)
|||||+|||+|||+|+++|++|||+||||+|+|||||++|. ++++||+||+||+|+. .+
T Consensus 207 M~sy~~i~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~--------------~~~~al~AG~D~~m~~~~~~~~~~~ 272 (721)
T 2x41_A 207 MSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGD--------------NPVEQLKAGNDLIMPGKAYQVNTER 272 (721)
T ss_dssp EECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEEECTTCSS--------------CHHHHHHHTCCBBCSCCGGGTCTTC
T ss_pred EecCCCCCCccccCCHHHHHHHHHHhcCCCEEEEccCchHH--------------HHHHHHHcCCCcccCCCcccccchh
Confidence 99999999999999999999999999999999999998763 3578999999999853 22
Q ss_pred ---HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhcCceeeccCCC
Q 010126 74 ---AIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSAR 150 (517)
Q Consensus 74 ---~~~l~~av~~g~i~~~~id~sv~RIL~~K~~~Gl~~~~p~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~ 150 (517)
.+.|.+||++|.|++++||+||+|||++|+++|+|+ +|.. ...+++++|+++|+++|++|||||||++
T Consensus 273 ~~~~~~l~~av~~G~i~~~~id~av~Ril~~k~~~gl~~-~~~~-------~~~~~~~~h~~la~~~A~esiVLLKN~~- 343 (721)
T 2x41_A 273 RDEIEEIMEALKEGKLSEEVLDECVRNILKVLVNAPSFK-NYRY-------SNKPDLEKHAKVAYEAGAEGVVLLRNEE- 343 (721)
T ss_dssp CCHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHTTSGGGG-TCCC-------CSCCCHHHHHHHHHHHHHHHCEEEEESS-
T ss_pred HHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHhCCCC-CCCc-------ccccCCHHHHHHHHHHHHhchhhhcCCC-
Confidence 278999999999999999999999999999999998 4421 2346789999999999999999999998
Q ss_pred ccCccCCCCCeEEEECCCCCcccccccc-ccccCCccCCHHHHHHhh-hc------eeee-------------cc---CC
Q 010126 151 TLPLSTLRHHTVAVIGPNSDVTVTMIGN-YAGVACGYTTPLQGISRY-AK------TIHQ-------------AG---CF 206 (517)
Q Consensus 151 ~LPL~~~~~~~v~vig~~a~~~~~~~G~-~~~~~~~~~s~~~~l~~~-~~------~~y~-------------~g---~~ 206 (517)
+|||++. +||+||||++.....++++ ....+.+.++++++|+++ +. +.|. .| +.
T Consensus 344 ~LPL~~~--~kIaviG~~A~~~~~~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~ 421 (721)
T 2x41_A 344 ALPLSEN--SKIALFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWG 421 (721)
T ss_dssp CCSCCTT--CCEEEESGGGTSCCCSCBSTTCCCCSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC----
T ss_pred cCCCCCC--CEEEEEecCCcCccccCCCCCCcCcCCCCCHHHHHHHhccCCCCceEEEEeecccccccccccCCCcccee
Confidence 9999864 7999999999876544332 233566778999999987 43 3455 44 21
Q ss_pred cc--ccCCcccH--HHHHHHhhcCCEEEEEecCCCccccccCCCC----CCCCChhHHHHHHHHH----HhCCCCEEEEE
Q 010126 207 GV--ACNGNQLI--GAAEVAARQADATVLVMGLDQSIEAEFIDRA----GLLLPGRQQELVSRVA----KASRGPVVLVL 274 (517)
Q Consensus 207 ~~--~~~~~~~~--~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~----~l~l~~~q~~li~~l~----~~~~~pvVvVl 274 (517)
.. ...+...+ ++++++++++|+||+++|.+ ++|+.||. ++.||+.|.+||++++ + .++|+|||+
T Consensus 422 ~~~~~~~~~~~~~~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~-~~~~vVVVl 497 (721)
T 2x41_A 422 TIIKPKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHE-QGKKVIVLL 497 (721)
T ss_dssp -CBCCCCCSCCSCHHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred ccccCCCchhhhcHHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCHHHHHHHHHHHHHHHH-hCCCEEEEE
Confidence 10 11233455 78899999999999999976 68999999 9999999999999998 6 578999999
Q ss_pred ecCceeec-cCcCCCCCccEEEEecCCCchhHHHHHHHHccCCCCCccccceeccccccCCCCccccccccc-----CCC
Q 010126 275 MCGGPVDV-SFAKNDPRIGAILWVGYPGQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAA-----RGY 348 (517)
Q Consensus 275 ~~g~Py~l-~~~~~~~~v~ail~a~~~g~~~~~A~advL~G~~~PsGkLPvT~~p~~~~~~~p~~~~~~~~~-----~~~ 348 (517)
++|+||+| +|. ++++|||++|++|+++++|+||||||++|||||||+|| |++. +++|..++...+. ..|
T Consensus 498 ~~g~P~~l~~~~---~~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~-p~~~-~~~p~~~~~~~~~~~~~~~~y 572 (721)
T 2x41_A 498 NIGSPVEVVSWR---DLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-PRDY-SDVPSWTFPGEPKDNPQKVVY 572 (721)
T ss_dssp ECSSCCCCTTTG---GGCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCE-ESSG-GGCSCTTTTCBSTTSCSEEEC
T ss_pred ecCCceEccchh---hcCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceee-cCcc-ccCccccCCCCCccccccccc
Confidence 99999999 665 57999999999999999999999999999999999997 8887 7788622221111 123
Q ss_pred CC---CccccCC---CCccccCCcCCCCCCceeCCCcCCCCcccccccccccccccccccccccccccCCCCCeeEEEEE
Q 010126 349 PG---RTYRFYK---GPVVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHV 422 (517)
Q Consensus 349 ~~---~~Yr~~~---~~~~ypFG~GLSYTtf~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 422 (517)
.. .+||||| .+|+||||||||||||+|+++++.. . +. .++|+|
T Consensus 573 ~eg~~vgYry~d~~~~~plypFG~GLSYTtF~ys~~~~~~-------------------------~-----~~-~~~v~v 621 (721)
T 2x41_A 573 EEDIYVGYRYYDTFGVEPAYEFGYGLSYTTFEYSDLNVSF-------------------------D-----GE-TLRVQY 621 (721)
T ss_dssp TTTTCCTHHHHHHHTCCEEECTTCCBCSSCEEEEEEEEEE-------------------------C-----SS-EEEEEE
T ss_pred cCCcccccceeecCCCceeeccCCCCCcceeEeeceEeec-------------------------C-----CC-eEEEEE
Confidence 32 3799997 4799999999999999999987421 1 12 699999
Q ss_pred EEEecCCcCcceEEEEEeeCCCCC-CCcccccccccee-eecCCCeeEEEEEeCCCCCceEEeCCCcEEecCeEEEEEEe
Q 010126 423 DIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKV-HVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 500 (517)
Q Consensus 423 ~V~NtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv-~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~~~G~y~~~vg 500 (517)
+|||||+++|+||||||+++|.++ .+|.|+|+||+|| .|+||||++|+|+|++ ++|++|| .+.|++|+|+|+|+||
T Consensus 622 ~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~-~~l~~~d-~~~~~~e~G~y~v~vG 699 (721)
T 2x41_A 622 RIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLASFN-GEEWVVEAGEYEVRVG 699 (721)
T ss_dssp EEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEEG-GGGCEEC-SSCEEECCEEEEEEEE
T ss_pred EEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEECH-HHhcEEc-CCeEEEeCceEEEEEE
Confidence 999999999999999999999887 8999999999999 9999999999999999 9999999 9999999999999999
Q ss_pred CCCceEEEEEEE
Q 010126 501 DLKHSISLQANL 512 (517)
Q Consensus 501 ~ss~~~~~~~~~ 512 (517)
.||+|++++..+
T Consensus 700 ~ss~d~~~~~~~ 711 (721)
T 2x41_A 700 ASSRNIKLKGTF 711 (721)
T ss_dssp EETTEEEEEEEE
T ss_pred CCCCCcceEEEE
Confidence 999999765443
No 4
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=3.1e-71 Score=616.53 Aligned_cols=331 Identities=25% Similarity=0.380 Sum_probs=275.8
Q ss_pred CCCccCCCCccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCchh----HHHH
Q 010126 1 MCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPF----LAIH 76 (517)
Q Consensus 1 M~sYn~ing~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~----~~~~ 76 (517)
|||||++||+|+|.|++||++|||+||||+|+|||||++|+.+.. ...+++++||+||+||+|.+. +.+.
T Consensus 259 M~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~~~~i~~------~~~ea~~~Al~AG~Dm~m~~~~~~~~~~~ 332 (822)
T 3rrx_A 259 MASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNAHKFVEG------CDLEQCAQAINAGVDVIMVPEHFEAFYHN 332 (822)
T ss_dssp EECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTGGGGSTT------CBTTBCHHHHHHTCCBEECTTTHHHHHHH
T ss_pred EeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccchhhhhcC------ChHHHHHHHHHcCCCEECCCccHHHHHHH
Confidence 999999999999999999999999999999999999999987753 234567899999999999652 4578
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCC--CCCCCCCCCCCCHHHHHHHHHHHhcCceeeccCCCccCc
Q 010126 77 TEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQ--PFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTLPL 154 (517)
Q Consensus 77 l~~av~~g~i~~~~id~sv~RIL~~K~~~Gl~~~~p~~~--~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL 154 (517)
+.+||++|+|++++||+||+|||++|+++|+|+ +|+.. ++.. ....+++++|+++|+++|++|||||||++++|||
T Consensus 333 l~~aV~~G~i~e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~~~-~~~~v~~~eh~~lAre~A~eSiVLLKN~~~~LPL 410 (822)
T 3rrx_A 333 TVKQVKAGVIAESRINDAVRRFLRAKIRWGVFT-KSKPSARPESQ-HPQWLGAAEHRTLAREAVRKSLVLLKNNESILPI 410 (822)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGGGS-CGGGTTCHHHHHHHHHHHHHHCEEEEEGGGCCSB
T ss_pred HHHHHHcCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCcccccccc-cccccCCHHHHHHHHHHHHhceEEEecCCCccCC
Confidence 999999999999999999999999999999999 55321 1111 1235789999999999999999999999999999
Q ss_pred cCCCCCeEEEECCCCCcccccccccc----c------cCCccCCHHHHHHhhhc-----eeeeccCCccccCCcccHHHH
Q 010126 155 STLRHHTVAVIGPNSDVTVTMIGNYA----G------VACGYTTPLQGISRYAK-----TIHQAGCFGVACNGNQLIGAA 219 (517)
Q Consensus 155 ~~~~~~~v~vig~~a~~~~~~~G~~~----~------~~~~~~s~~~~l~~~~~-----~~y~~g~~~~~~~~~~~~~~a 219 (517)
++. ++|+||||+++....+.|+|+ | ..++.++++++|++... +.|... .
T Consensus 411 ~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~t~l~gi~~~~~~~~~~v~~~~~--------~------ 474 (822)
T 3rrx_A 411 KAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNATSIFSGLQSQVTKAGGKITLSES--------G------ 474 (822)
T ss_dssp CTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCBCHHHHHHHHHHHTTCEEEECTT--------C------
T ss_pred CCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCCCHHHHHHHHHHhcCCeEEEccc--------c------
Confidence 864 799999999998766666653 1 13456899999998742 223210 0
Q ss_pred HHHhhcCCEEEEEecCCCccccccCCCCCCCCC---hhHHHHHHHHHHhCCCCEEEEEecCceeeccCcCCCCCccEEEE
Q 010126 220 EVAARQADATVLVMGLDQSIEAEFIDRAGLLLP---GRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILW 296 (517)
Q Consensus 220 ~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~---~~q~~li~~l~~~~~~pvVvVl~~g~Py~l~~~~~~~~v~ail~ 296 (517)
..++++|++|+++|.+...|++| ||.+|.|| +.|.+||+++++ .++|+|||+++|+|+.|.++. +.++|||+
T Consensus 475 -~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li~av~a-~g~pvVvVl~sGrP~~l~~~~--~~~~Ail~ 549 (822)
T 3rrx_A 475 -EYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALLKQLKA-DNIPVVTVFLSGRPLWVNKEL--NASDAFVA 549 (822)
T ss_dssp -CCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHHHHHHH-TTCCEEEEEECSSCCBCHHHH--HTCSEEEE
T ss_pred -cccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHHHHHHH-hCCCEEEEEeCCcceeccchh--hhCCeEEE
Confidence 23678999999999887666665 99999999 689999999986 689999999999999996543 47999999
Q ss_pred ecCCCchhHHHHHHHHccCC------CCCccccceeccccccCCCCcccccccccCCCCCCccccCCCCccccCCcCCCC
Q 010126 297 VGYPGQAGGAAIADVLFGRA------NPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSY 370 (517)
Q Consensus 297 a~~~g~~~~~A~advL~G~~------~PsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~~ypFG~GLSY 370 (517)
+|+||++++ |+||||||++ |||||||+|| |++. +|+|... . +.+| +|+|||||||||
T Consensus 550 aw~pG~eGg-AiAdVLfG~v~g~~~~nPSGkLP~T~-P~~~-~q~P~~~-~-----------~~~~--~PlypFG~GLSY 612 (822)
T 3rrx_A 550 AWLPGSEGE-GVADVLLTNKQGKTQFDFTGKLSFSW-PKYD-DQFTLNL-N-----------DADY--DPLFAYGYGLTY 612 (822)
T ss_dssp EECCCSBTH-HHHHHHBBCTTSCBSCCCCCCCSSCB-CSST-TCTTCCT-T-----------CSSC--CCSBCTTCCBCT
T ss_pred cCCCCchhH-HHHHHHhcccccccccCCCCCCceec-cCCc-ccCCccc-C-----------CCCC--ccccCCCCCcCC
Confidence 999999976 9999999987 9999999997 9987 8899521 0 1122 799999999999
Q ss_pred CCceeCC
Q 010126 371 TTFAHTL 377 (517)
Q Consensus 371 Ttf~~s~ 377 (517)
|+|+|..
T Consensus 613 t~f~~~~ 619 (822)
T 3rrx_A 613 QDNINVP 619 (822)
T ss_dssp TCCCCCC
T ss_pred CCCcccc
Confidence 9999854
No 5
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=2.8e-70 Score=599.69 Aligned_cols=332 Identities=24% Similarity=0.360 Sum_probs=281.4
Q ss_pred CCCccCCCCccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCch----hHHHH
Q 010126 1 MCSYNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP----FLAIH 76 (517)
Q Consensus 1 M~sYn~ing~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~----~~~~~ 76 (517)
|||||+|||+|||+|+++|++|||+||||+|+|||||++|+++...|+ .+..+++++|++||+||+|.+ .+.+.
T Consensus 250 M~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~~~~--~~~~~a~~~al~AG~D~~m~~~~~~~~~~~ 327 (602)
T 1x38_A 250 MISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDWEGIDRITTPAG--SDYSYSVKASILAGLDMIMVPNKYQQFISI 327 (602)
T ss_dssp EECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCTTTTGGGSSSTT--TTHHHHHHHHHHHTCCBEECCSCHHHHHHH
T ss_pred EecccccCCccccCCHHHHHHHhhcccCCCeEEEccchHHHHHHhhcC--CCHHHHHHHHHHcCCCcccCCcchhhHHHH
Confidence 999999999999999999999999999999999999999998875443 367899999999999999853 35678
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhcCceeeccCC--C---c
Q 010126 77 TEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSA--R---T 151 (517)
Q Consensus 77 l~~av~~g~i~~~~id~sv~RIL~~K~~~Gl~~~~p~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~--~---~ 151 (517)
|.+||++|.+++++||+||+|||++|+++|+|+ +|+..+ . ....+++++|+++++++|++|||||||++ + +
T Consensus 328 l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p~~~~--~-~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~ 403 (602)
T 1x38_A 328 LTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPYADP--A-MAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPL 403 (602)
T ss_dssp HHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCSCCG--G-GGGGTTCHHHHHHHHHHHHHHCEEEEECSSTTSCCC
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCCCCc--c-hhhccCCHHHHHHHHHHHHhceEEeccCCCCCcccc
Confidence 999999999999999999999999999999999 654321 1 12357899999999999999999999997 5 9
Q ss_pred cCccCCCCCeEEEECCCCCccccccccccc-------cCCccCCHHHHHHhhh----ceeeeccCCccccCCcccHHHHH
Q 010126 152 LPLSTLRHHTVAVIGPNSDVTVTMIGNYAG-------VACGYTTPLQGISRYA----KTIHQAGCFGVACNGNQLIGAAE 220 (517)
Q Consensus 152 LPL~~~~~~~v~vig~~a~~~~~~~G~~~~-------~~~~~~s~~~~l~~~~----~~~y~~g~~~~~~~~~~~~~~a~ 220 (517)
|||++. .++|+||||+++....++|+|+. .+....+++++|++.. .+.|..++. . .+.
T Consensus 404 LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~~~~~~~t~~~~l~~~~~~~~~v~~~~~~~---------~-~~~ 472 (602)
T 1x38_A 404 LPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTGRTTVGTTILEAVKAAVDPSTVVVFAENPD---------A-EFV 472 (602)
T ss_dssp CSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSSCCSSCBCHHHHHHHHSCTTCEEEEESSCC---------H-HHH
T ss_pred cccCCC-CCEEEEEcCCCccccccCCcceeeccCCCCCCCCcccHHHHHHHHhCCCeEEEEcCCCC---------H-HHH
Confidence 999764 47999999999876555565531 2345678999999863 245655431 1 122
Q ss_pred HHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHHhCCCCEEEEEecCceeeccCcCCCCCccEEEEecCC
Q 010126 221 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKNDPRIGAILWVGYP 300 (517)
Q Consensus 221 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~~~~~pvVvVl~~g~Py~l~~~~~~~~v~ail~a~~~ 300 (517)
+++++|+|||++|.+...++|| ||.++.||+.|.+||+++++ ++|+|||+++|+||+|.++. ++++|||++|+|
T Consensus 473 -~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~li~~v~~--~~~~VvVl~~g~P~~l~~~~--~~~~Ail~a~~p 546 (602)
T 1x38_A 473 -KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLSTVQAVCG--GVRCATVLISGRPVVVQPLL--AASDALVAAWLP 546 (602)
T ss_dssp -HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHHHHHHHHT--TSCEEEEEECSSCCCCHHHH--HHCSEEEEEECC
T ss_pred -HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHHHHHHHHh--CCCEEEEEeCCCceeccchh--hccCeEEeccCC
Confidence 3889999999999887778888 99999999999999999986 68999999999999996442 689999999999
Q ss_pred CchhHHHHHHHHccCCCCCccccceeccccccCCCCcccccccccCCCCCCccccCCCCccccCCcCCCCCC
Q 010126 301 GQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAARGYPGRTYRFYKGPVVFPFGHGMSYTT 372 (517)
Q Consensus 301 g~~~~~A~advL~G~~~PsGkLPvT~~p~~~~~~~p~~~~~~~~~~~~~~~~Yr~~~~~~~ypFG~GLSYTt 372 (517)
|+++ +|+||||||++||+||||+|| |++. +++|.+ .+||||+ |+||||||||||+
T Consensus 547 G~~g-~AiadvL~G~~nPsGkLP~t~-p~~~-~~~p~~------------~g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 547 GSEG-QGVTDALFGDFGFTGRLPRTW-FKSV-DQLPMN------------VGDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp CSBT-HHHHHHHTTSSCCCCCCSSCB-CSCG-GGCSCC------------TTCSSCC--CSBCTTCCBCCCC
T ss_pred chHH-HHHHHHHcCCCCCCccCcccc-cCcc-ccCCcc------------CCCCCCC--ccCcCCCCcCCCC
Confidence 9997 999999999999999999997 8877 778842 1388885 9999999999996
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=1.5e-62 Score=541.61 Aligned_cols=320 Identities=20% Similarity=0.264 Sum_probs=254.8
Q ss_pred CCC---ccCCC-------------CccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcC
Q 010126 1 MCS---YNQVN-------------GKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAG 64 (517)
Q Consensus 1 M~s---Yn~in-------------g~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG 64 (517)
||| ||+|| |+|||+|+++|++|||+||||+|+|||||++|+++... + +..+++++||+||
T Consensus 267 M~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~m~ai~~~--~--~~~~a~~~Al~AG 342 (642)
T 3bmx_A 267 MTAHVQFPAFDDTTYKSKLDGSDILVPATLSKKVMTGLLRQEMGFNGVIVTDALNMKAIADH--F--GQEEAVVMAVKAG 342 (642)
T ss_dssp EECCCBCTTTCCCEEECTTTSCEEECBGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT--S--CHHHHHHHHHHHT
T ss_pred EEccccccccCccccccccccccCcccccCCHHHHHHHhhCcCCCCEEEEeCchhhHHHHhc--C--CHHHHHHHHHHcC
Confidence 899 99999 89999999999999999999999999999999999752 2 5678999999999
Q ss_pred CCCcCch-------------hHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCC--CCCCCCCCCHH
Q 010126 65 LDLDCGP-------------FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFG--NLGPRDVCTPA 129 (517)
Q Consensus 65 ~D~~~~~-------------~~~~~l~~av~~g~i~~~~id~sv~RIL~~K~~~Gl~~~~p~~~~~~--~~~~~~~~~~~ 129 (517)
+||+|.+ .+.+.+.+||++|++++++||+||+|||++|+++|+|+..|+..... ......+++++
T Consensus 343 ~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~gl~~~~p~~~~~~~~~~~~~~~~~~~ 422 (642)
T 3bmx_A 343 VDIALMPASVTSLKEEQKFARVIQALKEAVKNGDIPEQQINNSVERIISLKIKRGMYPARNSDSTKEKIAKAKKIVGSKQ 422 (642)
T ss_dssp CSBEESCSCCCSGGGTHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCSSCCCCCCHHHHHHHHHHHTTCHH
T ss_pred CCEecccccccccccchhHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHcCCCcCCCCcccccchhhhhhhcCCHH
Confidence 9999543 34678999999999999999999999999999999998324421000 00012467999
Q ss_pred HHHHHHHHHhcCceeeccCCCccCccCCCCCeEEEECCCCCccccccccccccCCccCCHHHHHHhhh---ceeeeccCC
Q 010126 130 HQQLALQAAHQGIVLLKNSARTLPLSTLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRYA---KTIHQAGCF 206 (517)
Q Consensus 130 ~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~v~vig~~a~~~~~~~G~~~~~~~~~~s~~~~l~~~~---~~~y~~g~~ 206 (517)
|+++++++|++|||||||++++|||++++.++|+|+||++.. ..+++++|+++. ...+..++.
T Consensus 423 ~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~iaviG~~~~~--------------~~~~~~~l~~~~~~~~~~~~~~~~ 488 (642)
T 3bmx_A 423 HLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSRILIVAPYEEQ--------------TASIEQTIHDLIKRKKIKPVSLSK 488 (642)
T ss_dssp HHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCEEEEEESSHHH--------------HHHHHHHHHHHHHTTSSCCCEEEE
T ss_pred HHHHHHHHHHhCEEEEccCCCcCCCCCCCCCEEEEEeCCccc--------------hhhHHHHHHHhhCCCCeeEEeccC
Confidence 999999999999999999989999986556899999997422 256789998875 233333221
Q ss_pred ccccCCcccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhH------------HHHHHHHHHhCCCCEEEEE
Q 010126 207 GVACNGNQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ------------QELVSRVAKASRGPVVLVL 274 (517)
Q Consensus 207 ~~~~~~~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q------------~~li~~l~~~~~~pvVvVl 274 (517)
. ...+...+++++++++++|+||++++.......| ++.+|+.| .+||+++++ .++|+|||+
T Consensus 489 ~-~~~~~~~~~~a~~~a~~aDvvIv~~~~~~~~~~e-----~~~l~~~q~~~~~~~~~~~~~~li~~~~~-~~~pvVvv~ 561 (642)
T 3bmx_A 489 M-NFASQVFKTEHEKQVKEADYIITGSYVVKNDPVV-----NDGVIDDTISDSSKWATVFPRAVMKAALQ-HNKPFVLMS 561 (642)
T ss_dssp E-ECTTCCCCHHHHHHHHHCSEEEEEECCSSCCCCE-----ETTEECCCCCSSTTHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred C-CCcchhhHHHHHHHHhhCCEEEEEecCCCCCchh-----ccCCccccccccccccchhHHHHHHHHHH-cCCCEEEEe
Confidence 1 0111245678899999999999966532111111 34556666 899999976 678998876
Q ss_pred ecCceeeccCcCCCCCccEEEEecCC--------CchhHHHHHHHHccCCCCCccccceeccccccCCCCcccccccccC
Q 010126 275 MCGGPVDVSFAKNDPRIGAILWVGYP--------GQAGGAAIADVLFGRANPGGKLPMTWYPQDYVSRLPMTDMRMRAAR 346 (517)
Q Consensus 275 ~~g~Py~l~~~~~~~~v~ail~a~~~--------g~~~~~A~advL~G~~~PsGkLPvT~~p~~~~~~~p~~~~~~~~~~ 346 (517)
+ |+||+++|+ ++++|||++|++ |+++++|+||+|||++||+||||+|| |++. .|
T Consensus 562 ~-g~P~~l~~~---~~~~Ail~a~~~~G~~~g~~g~~~g~AiadvLfG~~nPsGkLPvt~-p~~~---~~---------- 623 (642)
T 3bmx_A 562 L-RNPYDAANF---EEAKALIAVYGFKGYANGRYLQPNIPAGVMAIFGQAKPKGTLPVDI-PSVT---KP---------- 623 (642)
T ss_dssp C-SCGGGGGGC---TTCSEEEECSCCCCEETTEESCSHHHHHHHHHTTSSCCCCCCSSCE-ECSS---ST----------
T ss_pred c-CChhccccc---cccCeEEEEccCcccccccccchHHHHHHHHHcCCCCCCccCceee-eccC---CC----------
Confidence 5 999999988 469999999999 79999999999999999999999997 7642 12
Q ss_pred CCCCCccccCCCCccccCCcCCCCCCce
Q 010126 347 GYPGRTYRFYKGPVVFPFGHGMSYTTFA 374 (517)
Q Consensus 347 ~~~~~~Yr~~~~~~~ypFG~GLSYTtf~ 374 (517)
++|+||||||||||+|.
T Consensus 624 -----------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 624 -----------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp -----------TSEEECTTCCBCTTTCS
T ss_pred -----------CCcccCCCCCccCCCCC
Confidence 25999999999999985
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=2.4e-35 Score=314.80 Aligned_cols=267 Identities=15% Similarity=0.130 Sum_probs=186.7
Q ss_pred CCCccCCCC----ccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCch----h
Q 010126 1 MCSYNQVNG----KPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP----F 72 (517)
Q Consensus 1 M~sYn~ing----~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~----~ 72 (517)
|||||.+|+ .|||+|+++|++|||+||||+|+|||||++|+++... + +..+++++|++||+||+|.+ .
T Consensus 241 M~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~GF~G~VvSD~l~m~ai~~~--~--~~~eaa~~Al~AG~Dm~l~~~~~~~ 316 (535)
T 3sql_A 241 MNAHLMIPAWDQQYPATLSPAILTGQLRHKLGFKGLIVTDALVMGGITQF--A--APDTVVVQAIAAGADILLMPPDVDG 316 (535)
T ss_dssp EECCCBBTTTBSSSCGGGCHHHHCCCCCCCSCCCSEEECSCTTSHHHHTT--S--CHHHHHHHHHHHTCSBEESCSCHHH
T ss_pred EecCccCCCcCCCcCcccCHHHHHHHHHHhcCCCceEEcChhHHHHHHhc--C--CHHHHHHHHHHCCCCeecCCCCHHH
Confidence 999988874 8999999999999999999999999999999999753 2 57899999999999998642 3
Q ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHhcCceeeccCCCcc
Q 010126 73 LAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQPFGNLGPRDVCTPAHQQLALQAAHQGIVLLKNSARTL 152 (517)
Q Consensus 73 ~~~~l~~av~~g~i~~~~id~sv~RIL~~K~~~Gl~~~~p~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~L 152 (517)
+.+.+.+||++|++++++||+||+|||++|+++|+|+ ++... . ...+++++|+++|+++|++|||| +++|
T Consensus 317 ~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~lGl~~-~~~~~----~-~~~~~~~eh~~lA~e~A~eSiVL----~~~L 386 (535)
T 3sql_A 317 AIIAIETAIKTGQLSESRIYESVERIWQAKQKILTAT-PSTFP----Q-GISGDRPETRKTVAMVLERATKH----QKSL 386 (535)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHTSC-CCCTT----T-TCCTTCHHHHHHHHHHHHHHCEE----CSSC
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcCCC-CCccc----h-hhccCCHHHHHHHHHHHHhCeEE----CCcC
Confidence 5678999999999999999999999999999999998 33221 1 23678999999999999999999 3599
Q ss_pred Ccc----CCCCCeEEEECCCCCccccccccccccCCccCCHHHHHHhh-hceeeeccCCccccCCcccHHHHHHHhhcCC
Q 010126 153 PLS----TLRHHTVAVIGPNSDVTVTMIGNYAGVACGYTTPLQGISRY-AKTIHQAGCFGVACNGNQLIGAAEVAARQAD 227 (517)
Q Consensus 153 PL~----~~~~~~v~vig~~a~~~~~~~G~~~~~~~~~~s~~~~l~~~-~~~~y~~g~~~~~~~~~~~~~~a~~~a~~aD 227 (517)
||+ +.+.++|+|||++++... |+|.++..+.+ ++. +.+.+...++ +..... ....-
T Consensus 387 PL~~~~~~~~~~~laVIG~~a~~~~-----~~g~~~~~~~P----~~~G~~~~~~~~~~---------~~~~~~-~~~~~ 447 (535)
T 3sql_A 387 VKISSFPDNFARNLIVVDSVLKSPF-----LRPNCPAIAIP----QRHGYAAEIVELKT---------LPRLQL-EAIPT 447 (535)
T ss_dssp CCCCCCSTTSEEEEEEESCGGGCTT-----CCTTCHHHHHH----HTTTEEEEEEETTT---------GGGBCC-CSSCE
T ss_pred CCCcccccCCCCEEEEECCCCCCcc-----cCCCCCcccCH----HHcCceEEEEcCcc---------cccccc-CCCCe
Confidence 998 334689999999987643 44444433344 222 3344333221 000000 01112
Q ss_pred EEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHHhCCCCEEEEEecCceeeccCcC-CCCCccEEEEecCCCc--hh
Q 010126 228 ATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAK-NDPRIGAILWVGYPGQ--AG 304 (517)
Q Consensus 228 ~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~~~~~pvVvVl~~g~Py~l~~~~-~~~~v~ail~a~~~g~--~~ 304 (517)
.+=+++..++-. .+-. +. .+++++|.+. +.-.-+|+. |+||.+.|+. ..|.++ ++|.+|| ++
T Consensus 448 ~~q~f~r~~~f~-------~~~~-~~--~~~~~~l~~~-~~~~~~~~y-g~py~~~~~~~~~~~~p---~~~~~gq~~~~ 512 (535)
T 3sql_A 448 LIQCFLRGNPFT-------EKLA-DP--IDVLQKIAAQ-IPLQGVIFY-GSPYFLEALQTTLPEIP---WWFSYGQMAIA 512 (535)
T ss_dssp EEEEEECCCSSC-------SSCC-CC--HHHHHHHHHH-SCEEEEEEE-ECCTTHHHHHHHCTTSC---EEEESCCSHHH
T ss_pred EEEEeecCCCCC-------CCcc-hH--HHHHHHHHhc-CceeEEEEe-CChhHHHHHHHHhhcCC---cccCCccCHHH
Confidence 233444332211 1112 22 5577777653 332334544 9999998874 334444 5677776 45
Q ss_pred HHHHHHHHccC
Q 010126 305 GAAIADVLFGR 315 (517)
Q Consensus 305 ~~A~advL~G~ 315 (517)
+.-+...|++.
T Consensus 513 q~~~~~~~~~~ 523 (535)
T 3sql_A 513 QAEICTSLWEE 523 (535)
T ss_dssp HHHHHHHTCSS
T ss_pred HHHHHHHHhcc
Confidence 66666777774
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=99.89 E-value=4.5e-24 Score=218.03 Aligned_cols=107 Identities=21% Similarity=0.302 Sum_probs=92.6
Q ss_pred CCC---ccCCCC-ccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCch-----
Q 010126 1 MCS---YNQVNG-KPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP----- 71 (517)
Q Consensus 1 M~s---Yn~ing-~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~----- 71 (517)
||| ||+||| .|||+|+++|++|||+||||+|+|||||++|+++...+ +..+++++|++||+||+|.+
T Consensus 223 M~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~VvSD~~~m~~i~~~~----~~~~~~~~Al~AG~D~~l~~~~~~~ 298 (351)
T 3tev_A 223 MTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVIVTDSMGMQAIDANY----GRGEAAVRALRAGADLVMALGRREV 298 (351)
T ss_dssp EECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEEEECCTTSHHHHHHS----CHHHHHHHHHHHTCSBEECCSSHHH
T ss_pred EecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEEEeccchHHHHHhcC----CHHHHHHHHHHcCCCEECCCCChhH
Confidence 899 999999 79999999999999999999999999999999997632 36789999999999999853
Q ss_pred --hHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHhcCCCCCCCCC
Q 010126 72 --FLAIHTEGAVRGGLLREEDVNLALAYTITVQMRLGMFDGEPSAQ 115 (517)
Q Consensus 72 --~~~~~l~~av~~g~i~~~~id~sv~RIL~~K~~~Gl~~~~p~~~ 115 (517)
.+.+.+.+++++ ++++||+||+|||++|+++|+|+ +|+.+
T Consensus 299 ~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g~f~-~Py~~ 340 (351)
T 3tev_A 299 QQATLAAVAEYVPE---NQAAVATKRERLRALARRFPAQA-DETLD 340 (351)
T ss_dssp HHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSCCCC------
T ss_pred HHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhCCCC-CCCCC
Confidence 135678889988 99999999999999999999999 77654
No 9
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=99.74 E-value=1.5e-19 Score=184.18 Aligned_cols=96 Identities=21% Similarity=0.180 Sum_probs=81.1
Q ss_pred CCC---ccCCCCccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCchh---HH
Q 010126 1 MCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPF---LA 74 (517)
Q Consensus 1 M~s---Yn~ing~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~---~~ 74 (517)
||| ||+|||.|||+|+++|++|||+||||+|+|||||++|+++.. ..+..+++++||+|||||+|.+. ..
T Consensus 221 M~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~~~~e~a~~Al~AG~Dm~l~~~~~~~~ 296 (348)
T 4g6c_A 221 IPAHVIYTQVDKRPAGFSRVWLQDILRGKLGFTGAIFSDDLSMEAARE----GGTLTQAADAALAAGCDMVLVCNQPDAA 296 (348)
T ss_dssp EECSCEETTTCSSCGGGCHHHHCCCCCCCSCCCSEEEEEETTCGGGGT----TCCHHHHHHHHHHHTCSEEECCSCHHHH
T ss_pred EecceeecCCCCccccCCHHHHHHHHhhccCCCeEEEccCCchhhhhh----cCCHHHHHHHHHHcCCCEECCCCChHHH
Confidence 899 999999999999999999999999999999999999998643 34778999999999999998643 44
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHh
Q 010126 75 IHTEGAVRGGLLREEDVNLALAYTITVQMRL 105 (517)
Q Consensus 75 ~~l~~av~~g~i~~~~id~sv~RIL~~K~~~ 105 (517)
..+.++++. +.++++++||++++.+.
T Consensus 297 ~~~~~al~~-----~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 297 EVVLNGLKA-----RASAESVRRIKRMRARG 322 (348)
T ss_dssp HHHHHHCCC-------CHHHHHHHHTTSCCS
T ss_pred HHHHHHhhc-----ccchHHHHHHHHHHhcc
Confidence 556666653 56789999999987653
No 10
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=99.69 E-value=7.5e-19 Score=178.71 Aligned_cols=94 Identities=18% Similarity=0.167 Sum_probs=79.8
Q ss_pred CCC---ccCCCCccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCch---hHH
Q 010126 1 MCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGP---FLA 74 (517)
Q Consensus 1 M~s---Yn~ing~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~---~~~ 74 (517)
||| ||+|||.|||+|+++|++|||+||||+|+|||||+.|+++.. ..+..+++++||+||+||+|.+ ...
T Consensus 204 M~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~~~~ea~~~Al~AG~Dm~l~~~~~~~~ 279 (340)
T 2oxn_A 204 MPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFSDDLSMEGAAV----MGGPVERSHQALVAGCDMILICNKREAA 279 (340)
T ss_dssp EECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEEEEGGGSCHHH----HCSHHHHHHHHHHHTCSEEECCSCHHHH
T ss_pred eeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEcccchhhhhhc----cCCHHHHHHHHHHcCCCEEcCCCCHHHH
Confidence 899 999999999999999999999999999999999999987643 2467889999999999999864 234
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHH
Q 010126 75 IHTEGAVRGGLLREEDVNLALAYTIT 100 (517)
Q Consensus 75 ~~l~~av~~g~i~~~~id~sv~RIL~ 100 (517)
..+.+++. .++++|+++++.|+..
T Consensus 280 ~~~~~av~--~~~~~Rl~~~~~~~~~ 303 (340)
T 2oxn_A 280 VEVLDNLP--IMEVPQAEALLKKQQF 303 (340)
T ss_dssp HHHHHHSC--CCCCGGGGGGSCSCCC
T ss_pred HHHHHHHH--HhhHHHHHHHhhcccc
Confidence 56777773 4888899888877654
No 11
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=99.67 E-value=1.5e-18 Score=176.85 Aligned_cols=95 Identities=21% Similarity=0.188 Sum_probs=77.9
Q ss_pred CCC---ccCCCCccCccCHHHHHHHhhhcCCCCcEEEcCchhhhhhhhcccccCChHHHHHHHHHcCCCCcCchh---HH
Q 010126 1 MCS---YNQVNGKPTCADPDILKNTIHGQWRLDGYIVSDCDSVGVLYNTQHYTRTPEEAAADAIKAGLDLDCGPF---LA 74 (517)
Q Consensus 1 M~s---Yn~ing~pa~~s~~ll~~lLR~e~gF~G~ViSD~~~m~~~~~~~~~~~~~~ea~~~al~AG~D~~~~~~---~~ 74 (517)
||| ||+|||.|||+|+++|++|||+||||+|+|||||++|+++.. ..+..+++++||+|||||+|.+. ..
T Consensus 210 M~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~VvSD~l~m~~~~~----~~~~~eaa~~Al~AG~Dm~l~~~~~~~~ 285 (349)
T 4gvf_A 210 MPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGVIFSDDLSMEGAAI----MGSYAERAQASLDAGCDMILVCNNRKGA 285 (349)
T ss_dssp EECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSEEEEEEGGGCCCGG----GCCHHHHHHHHHHHTCSEEEECSCHHHH
T ss_pred eecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEEEEecCCccccccc----cCCHHHHHHHHHHcCCCEEcCCCCHHHH
Confidence 899 999999999999999999999999999999999999987632 34778999999999999998643 33
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHH
Q 010126 75 IHTEGAVRGGLLREEDVNLALAYTITV 101 (517)
Q Consensus 75 ~~l~~av~~g~i~~~~id~sv~RIL~~ 101 (517)
..+.+++.. ++++|+++++.|++.-
T Consensus 286 ~~~l~al~~--~~~~r~~~~~~r~~~~ 310 (349)
T 4gvf_A 286 VSVLDNLSP--IKAERVTRLYHKGSFS 310 (349)
T ss_dssp HHHHHHSCC--CCCGGGGGGCCCCCCC
T ss_pred HHHHHHhhh--ccHHHHHHHhhcCCCC
Confidence 456666654 6667777766665443
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=96.81 E-value=0.0056 Score=52.91 Aligned_cols=50 Identities=14% Similarity=0.157 Sum_probs=40.8
Q ss_pred eEEEEEEEEecCCcC-cceEEEEEeeCCCCCCCccccccccceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMA-GTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~-G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~v~~~~~~ 475 (517)
.++++|+|+|.|..+ +.-.|.||+.. ++.+-+.+.|+||++++|+|.+..
T Consensus 34 ~~ti~vtV~N~G~~~a~~~~V~lyvng---------~~v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 34 LAEYEVHVKNLGGIGVPSTKVRVYING---------TLYKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEETT---------EEEEEEEEEECTTCEEEEEEEECC
T ss_pred EEEEEEEEEECCCCccCCcEEEEEECC---------EEEeeEEeccCCCCeEEEEEEEEc
Confidence 699999999999774 77888999842 234445668999999999999987
No 13
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=96.26 E-value=0.0031 Score=53.99 Aligned_cols=55 Identities=18% Similarity=0.300 Sum_probs=41.6
Q ss_pred eEEEEEEEEecCCc-CcceEEEEEeeCCCCCCCcccccccccee-eecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~-~G~evvQlY~~~~~~~~~P~k~L~gF~kv-~l~pGes~~v~~~~~~ 475 (517)
.++++++|+|.|.. ++.--|.+|+..|.+...+ .|-..| .|+||++.+++|++..
T Consensus 17 ~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg~~----vgt~tv~~LaaG~s~t~~v~~~~ 73 (122)
T 2kut_A 17 EITVSARVTNRGAAEAHNVPVAVYLGNPAQGGVE----IGRDTISRIPVGGTGLARVQWKA 73 (122)
T ss_dssp EEEEEEEEECCSSSCBCCCCEEECSSCTTTCCCC----CBCCCCSCBCTTCEEECCEEEEC
T ss_pred eEEEEEEEEeCCCcccCcEEEEEEeCCCccCCeE----EeeEEccccCCCCeEEEEEEEec
Confidence 79999999999976 6778899999997644333 333445 5999999996665554
No 14
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=96.08 E-value=0.024 Score=47.93 Aligned_cols=61 Identities=10% Similarity=0.195 Sum_probs=48.3
Q ss_pred eEEEEEEEEecCCc-CcceEEEEEeeCCCCCCCcccccccccee-eecCCCeeEEEEEeCCCCCceEEeCCCcEEecCeE
Q 010126 417 SLGLHVDIKNTGDM-AGTHTLLVFAKPPAGNWSPNKQLIGFKKV-HVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGE 494 (517)
Q Consensus 417 ~~~v~v~V~NtG~~-~G~evvQlY~~~~~~~~~P~k~L~gF~kv-~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~~~G~ 494 (517)
.++++++|+|.|.. ++.-.|-+|+. -.+.+.+.| .|++|++++|+|.+.. +. ++|+
T Consensus 20 ~~ti~atVkN~G~~~a~~~~V~ly~~---------g~~v~t~~v~~LaaG~s~tv~~~w~~-~~------------~~G~ 77 (114)
T 2l0d_A 20 VNTMTATIENQGNKDSTSFNVSLLVD---------GIVVDTQTVTSLESENSTNVDFHWTL-DG------------TANS 77 (114)
T ss_dssp EEEEEEEEEECSSSCBCCEEEEEEET---------TEEEEEEEESCBCBTCEEEEEEEEEC-CC------------SCSE
T ss_pred eEEEEEEEEECCCCCCCCEEEEEEEC---------CEEEcceecccccCCCEEEEEEEEee-cC------------cCce
Confidence 69999999999974 67788999985 246677778 5999999999998776 20 2577
Q ss_pred EEEEE
Q 010126 495 HSLHI 499 (517)
Q Consensus 495 y~~~v 499 (517)
|.|.+
T Consensus 78 ytl~a 82 (114)
T 2l0d_A 78 YTLTV 82 (114)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77765
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=93.72 E-value=0.46 Score=40.31 Aligned_cols=67 Identities=10% Similarity=0.121 Sum_probs=46.3
Q ss_pred eEEEEEEEEecCCcC-------cceEEEEEeeCCCCC-------CCccccccccceeeecCCCeeEEEEEeCCCCCceEE
Q 010126 417 SLGLHVDIKNTGDMA-------GTHTLLVFAKPPAGN-------WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVV 482 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~-------G~evvQlY~~~~~~~-------~~P~k~L~gF~kv~l~pGes~~v~~~~~~~~~~~~~ 482 (517)
.+.+.++|+|.|+.+ |.. ..+.+.+..+. ++-- ..+++.+.|+|||+.+.+++++.
T Consensus 19 ~v~~~ltv~N~s~~~v~l~f~Sgq~-~Df~v~d~~G~~VwrwS~~~~F--tQa~~~~tl~pGE~~~f~~~w~~------- 88 (120)
T 3isy_A 19 QIKFNMSLKNQSERAIEFQFSTGQK-FELVVYDSEHKERYRYSKEKMF--TQAFQNLTLESGETYDFSDVWKE------- 88 (120)
T ss_dssp CEEEEEEEEECSSSCEEEEESSSCC-EEEEEECTTCCEEEETTTTCCC--CCCCEEEEECTTCEEEEEEEESS-------
T ss_pred eEEEEEEEEcCCCCcEEEEeCCCCE-EEEEEECCCCCEEEEccccchh--hhhhceEEECCCCEEEEEEEeCC-------
Confidence 689999999999853 221 23455554332 2222 33778889999999999999882
Q ss_pred eCCCcEEecCeEEEEEE
Q 010126 483 DKFGIRRIPMGEHSLHI 499 (517)
Q Consensus 483 d~~~~~~~~~G~y~~~v 499 (517)
.++||+|++.+
T Consensus 89 ------~~~pG~Ytl~a 99 (120)
T 3isy_A 89 ------VPEPGTYEVKV 99 (120)
T ss_dssp ------CCCSEEEEEEE
T ss_pred ------CCCCccEEEEE
Confidence 34689999844
No 16
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=90.93 E-value=0.4 Score=38.81 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=30.6
Q ss_pred EEEEEEEEecCCcCcceEEEEEeeCC---CC-C-CCcccccccc-------ceeeecCCCeeEEEEE
Q 010126 418 LGLHVDIKNTGDMAGTHTLLVFAKPP---AG-N-WSPNKQLIGF-------KKVHVTAGALQSVRLD 472 (517)
Q Consensus 418 ~~v~v~V~NtG~~~G~evvQlY~~~~---~~-~-~~P~k~L~gF-------~kv~l~pGes~~v~~~ 472 (517)
-+++++|+|||+|+ ||+=-... .. . ......=.|+ ..|..+||++++|++.
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 47899999999998 77711111 00 0 1111111122 4677899999999885
No 17
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=88.32 E-value=0.86 Score=38.41 Aligned_cols=51 Identities=20% Similarity=0.165 Sum_probs=30.7
Q ss_pred EEEEEEEEecCCcCcceEEEEEeeCCC---C-C-CCcccccccc-------ceeeecCCCeeEEEEE
Q 010126 418 LGLHVDIKNTGDMAGTHTLLVFAKPPA---G-N-WSPNKQLIGF-------KKVHVTAGALQSVRLD 472 (517)
Q Consensus 418 ~~v~v~V~NtG~~~G~evvQlY~~~~~---~-~-~~P~k~L~gF-------~kv~l~pGes~~v~~~ 472 (517)
-+++++|+|||+|+ ||+=-.... . . ......=.|+ ..|..+||++++|+|.
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 47899999999998 676111111 0 0 1111111222 4577899999999886
No 18
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=88.32 E-value=0.86 Score=38.41 Aligned_cols=51 Identities=20% Similarity=0.165 Sum_probs=30.7
Q ss_pred EEEEEEEEecCCcCcceEEEEEeeCCC---C-C-CCcccccccc-------ceeeecCCCeeEEEEE
Q 010126 418 LGLHVDIKNTGDMAGTHTLLVFAKPPA---G-N-WSPNKQLIGF-------KKVHVTAGALQSVRLD 472 (517)
Q Consensus 418 ~~v~v~V~NtG~~~G~evvQlY~~~~~---~-~-~~P~k~L~gF-------~kv~l~pGes~~v~~~ 472 (517)
-+++++|+|||+|+ ||+=-.... . . ......=.|+ ..|..+||++++|+|.
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 47899999999998 676111111 0 0 1111111222 4577899999999886
No 19
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=87.43 E-value=0.85 Score=38.95 Aligned_cols=55 Identities=22% Similarity=0.414 Sum_probs=35.4
Q ss_pred EEEEEEEecCCcC----cceEEEEEeeCCCC----C--CCc--------cccccccceeeecCCCeeEEEEEeC
Q 010126 419 GLHVDIKNTGDMA----GTHTLLVFAKPPAG----N--WSP--------NKQLIGFKKVHVTAGALQSVRLDIH 474 (517)
Q Consensus 419 ~v~v~V~NtG~~~----G~evvQlY~~~~~~----~--~~P--------~k~L~gF~kv~l~pGes~~v~~~~~ 474 (517)
+|+++++|+|+.+ |-+.|-.=-.+... . .-| ..+..+..++ |.|||+.+|+|+.+
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~~-l~pGes~~vtf~~~ 100 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTKL-IGSGEKDSVTFDVS 100 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECCC-BCTTCEEEEEEEGG
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccce-eCCCcEEEEEEeCc
Confidence 6889999999998 88888762111110 0 011 1122233333 89999999999987
No 20
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=86.72 E-value=1.8 Score=43.61 Aligned_cols=62 Identities=18% Similarity=0.163 Sum_probs=35.5
Q ss_pred eEEEEEEEEecCCcCc------------ceEEEEEeeC---CCCCCCccc---cccccceeeecCCCeeEEEEEeCCCCC
Q 010126 417 SLGLHVDIKNTGDMAG------------THTLLVFAKP---PAGNWSPNK---QLIGFKKVHVTAGALQSVRLDIHVCKH 478 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G------------~evvQlY~~~---~~~~~~P~k---~L~gF~kv~l~pGes~~v~~~~~~~~~ 478 (517)
.+.|.++|||+|+.+= .+.++++-.. |....+..+ .+..| +.|+||||.+++|.|...-+
T Consensus 37 ~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~yd 114 (343)
T 2x3c_A 37 DVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLYD 114 (343)
T ss_dssp CCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTBT
T ss_pred CeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhccc
Confidence 4789999999998641 1223343110 111101111 12222 46899999999999976445
Q ss_pred ce
Q 010126 479 LS 480 (517)
Q Consensus 479 ~~ 480 (517)
|+
T Consensus 115 Ls 116 (343)
T 2x3c_A 115 MS 116 (343)
T ss_dssp CC
T ss_pred cC
Confidence 55
No 21
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=86.46 E-value=2.7 Score=34.40 Aligned_cols=62 Identities=11% Similarity=0.170 Sum_probs=38.2
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCCCCccccccccceeeecCCCeeEEEEEeCCCCCceEEeC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDK 484 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~v~~~~~~~~~~~~~d~ 484 (517)
..+-+++++|+|+.+..- ++ ....... ...--.-..+-.|+||++.+|++++.. +....+++
T Consensus 27 ~~~~~~~l~N~g~~p~~~--~~--~~~~~~~-~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~~ 88 (112)
T 2e6j_A 27 AHCYEAILYNKGSIDALF--NM--TPPTSAL-GACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFEE 88 (112)
T ss_dssp CEEEEEEEEECCSSCEEE--EE--CCCSSHH-HHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEEE
T ss_pred EEEEEEEEEECCcceEEE--EE--ecCCccc-cCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEEE
Confidence 467899999999986321 11 1111100 000111234567999999999999998 66666654
No 22
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=84.61 E-value=1.6 Score=37.35 Aligned_cols=55 Identities=22% Similarity=0.405 Sum_probs=31.1
Q ss_pred EEEEEEEecCCcC----cceEEEEEeeCCC---------C---CCCc--cccccccceeeecCCCeeEEEEEeC
Q 010126 419 GLHVDIKNTGDMA----GTHTLLVFAKPPA---------G---NWSP--NKQLIGFKKVHVTAGALQSVRLDIH 474 (517)
Q Consensus 419 ~v~v~V~NtG~~~----G~evvQlY~~~~~---------~---~~~P--~k~L~gF~kv~l~pGes~~v~~~~~ 474 (517)
+|+|+++|+|+.+ +-++|-.=-..+. . .--| ..+..+ ....|.|||+.+|+|+++
T Consensus 28 ~vtv~~~N~g~~~~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~v~~~~~~~~~-~t~~l~pGet~svtf~~~ 100 (129)
T 1cuo_A 28 EFTVNFEHKGHMPKTGMGHNWVLAKSADVGDVAKEGAHAGADNNFVTPGDKRVIA-FTPIIGGGEKTSVKFKVS 100 (129)
T ss_dssp EEEEEEEECSSSCHHHHCBCCEEEEGGGHHHHHHHHHTTCGGGTTSCTTCTTCSE-ECCCBCTTCEEEEEEEGG
T ss_pred EEEEEEEECCCCcccccccceEEecCcchhhhHHHhhhcccccccccccccccee-eeeEECCCCEEEEEEecc
Confidence 5888999999986 6666543211100 0 0001 000011 112479999999999986
No 23
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=84.35 E-value=2.8 Score=41.81 Aligned_cols=55 Identities=13% Similarity=0.243 Sum_probs=36.2
Q ss_pred eEEEEEEEEecCCcCcceEEEE---------EeeCCCC--CCCccccccccceee------ecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLV---------FAKPPAG--NWSPNKQLIGFKKVH------VTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQl---------Y~~~~~~--~~~P~k~L~gF~kv~------l~pGes~~v~~~~~~ 475 (517)
+++++++|||.|+.+ |+| |+.+-.. ...-..+|.+.+-.. |+||||++++++.+-
T Consensus 265 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFln~~~~~~~~~~P~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 265 AMRMKLTITNHGNSP----IRLGEFYTASVRFLDSDVYKDTTGYPEDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp EEEEEEEEEECSSSC----EEEEEEECSSCEEECTTTCCCCSCCCGGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEEcCCCCc----eEeeeEEeccEEEeCCcccccCCCChHHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 699999999998754 454 3332111 122234666554433 899999999998874
No 24
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=84.30 E-value=2.2 Score=45.78 Aligned_cols=102 Identities=14% Similarity=0.139 Sum_probs=61.8
Q ss_pred ccccCCcCCCCCCceeCCCcCCCCcccccccccccccccccccccccccccCCCCCeeEEEEEEEEecCC--cCcceEEE
Q 010126 360 VVFPFGHGMSYTTFAHTLSKAPNQFSVPIATSLYAFKNTTISSNAIRVAHTNCNDAMSLGLHVDIKNTGD--MAGTHTLL 437 (517)
Q Consensus 360 ~~ypFG~GLSYTtf~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~V~NtG~--~~G~evvQ 437 (517)
.+|..|.|+.|..|..+++..... |..++ .+.+. .+. +.+|+++|+|.+. ++|.+++
T Consensus 337 ~~ye~~~~i~~~~~~~~~l~~~~~------------~~~~~---~~~~~----~g~-~~~~~~~vtn~~~~~~~~~~~~- 395 (601)
T 1w8o_A 337 LLYEPGTGIRYANFNLAWLGGICA------------PFTIP---DVALE----PGQ-QVTVPVAVTNQSGIAVPKPSLQ- 395 (601)
T ss_dssp EEECCSSEEEEEEECHHHHTBCSC------------CEECC---CEEEC----TTC-EEEEEEEEECCSSSCBSSCEEE-
T ss_pred EEEecCCcceEEEecHHHhccccC------------CCcCc---cceec----CCc-eeEEEEEEECCCceeccCceEE-
Confidence 466677778888887766653210 00000 01111 122 6899999999976 7888877
Q ss_pred EEeeCCCCCCCccccccccceeeecCCCeeEEEEEeCCCCCceEEeCCCcEEecCeEEEEEEeC
Q 010126 438 VFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIGD 501 (517)
Q Consensus 438 lY~~~~~~~~~P~k~L~gF~kv~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~~~G~y~~~vg~ 501 (517)
||+..... ..+ .-..++||++.+++|+|.. .+- +++|.|.+-+.-
T Consensus 396 ~~~~~~~~-------~~~-~~~~~~~g~~~t~~~~vt~-~~~----------~~~g~y~l~~~~ 440 (601)
T 1w8o_A 396 LDASPDWQ-------VQG-SVEPLMPGRQAKGQVTITV-PAG----------TTPGRYRVGATL 440 (601)
T ss_dssp EECCTTSE-------EEE-EECCBCTTCEEEEEEEEEC-CTT----------CCCEEEEEEEEE
T ss_pred EecCCCcE-------Eec-cccccCCCCceEEEEEEec-CCC----------CCCCcEEeeEEE
Confidence 88743322 111 2357899999999888777 331 346777765553
No 25
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=82.12 E-value=2.4 Score=36.26 Aligned_cols=55 Identities=16% Similarity=0.422 Sum_probs=31.1
Q ss_pred EEEEEEEecCCcC----cceEEEEEeeCCC------------CCCCc--cccccccceeeecCCCeeEEEEEeC
Q 010126 419 GLHVDIKNTGDMA----GTHTLLVFAKPPA------------GNWSP--NKQLIGFKKVHVTAGALQSVRLDIH 474 (517)
Q Consensus 419 ~v~v~V~NtG~~~----G~evvQlY~~~~~------------~~~~P--~k~L~gF~kv~l~pGes~~v~~~~~ 474 (517)
+|+|+++|+|..+ +-++|-.=-.... ..--| ..+..+. ...|.||||.+|+|+++
T Consensus 27 ~vtv~~~N~g~~p~~~m~Hn~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~-t~~l~pGes~~vtf~~~ 99 (128)
T 2iaa_C 27 EFTINLKHTGKLPKAAMGHNVVVSKKSDESAVATDGMKAGLNNDYVKAGDERVIAH-TSVIGGGETDSVTFDVS 99 (128)
T ss_dssp EEEEEEEECSCSCHHHHCBCCEEEETTHHHHHHHHHHHHCGGGTTSCTTCTTEEEE-CCCBCTTCEEEEEEESS
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHhhhhccccccccccccchhhcc-ceeeCCCCEEEEEEecc
Confidence 5889999999887 6776643100000 00000 0011111 22479999999999986
No 26
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=81.16 E-value=2.4 Score=36.22 Aligned_cols=55 Identities=22% Similarity=0.439 Sum_probs=31.1
Q ss_pred EEEEEEEecCCcC----cceEEEEEeeCC---------CC---CCCc--cccccccceeeecCCCeeEEEEEeC
Q 010126 419 GLHVDIKNTGDMA----GTHTLLVFAKPP---------AG---NWSP--NKQLIGFKKVHVTAGALQSVRLDIH 474 (517)
Q Consensus 419 ~v~v~V~NtG~~~----G~evvQlY~~~~---------~~---~~~P--~k~L~gF~kv~l~pGes~~v~~~~~ 474 (517)
+|+|+++|+|..+ +-++|-.=-... .. .--| ..+..+..+ .|.||||.+|+|+.+
T Consensus 28 ~vtv~~~N~g~~p~~~m~H~~vi~~~~~~~~~~~~~m~~~~~~~~~~~~~~~~~~~t~-~l~pGet~svtf~~~ 100 (128)
T 1nwp_A 28 TFTVELTHSGSLPKNVMGHNLVISKEADMQPIATDGLSAGIDKQYLKDGDARVIAHTK-VIGAGEKDSVTFDVS 100 (128)
T ss_dssp EEEEEEEECSSCCHHHHCBCCEEEEGGGHHHHHHHHTTTCGGGTTSCTTCTTEEEECC-CBCTTCEEEEEEEGG
T ss_pred EEEEEEEECCCCcccCCCceEEEccccchhhHHHHHhhccccccccccccchhheeee-eeCCCCEEEEEEecc
Confidence 5889999999886 666654211000 00 0000 001111122 489999999999986
No 27
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=79.31 E-value=3.4 Score=35.32 Aligned_cols=15 Identities=27% Similarity=0.465 Sum_probs=13.6
Q ss_pred eecCCCeeEEEEEeC
Q 010126 460 HVTAGALQSVRLDIH 474 (517)
Q Consensus 460 ~l~pGes~~v~~~~~ 474 (517)
.|.||||.+|+|+.+
T Consensus 86 ~l~pGet~svtf~~~ 100 (129)
T 2ccw_A 86 VIGGGESDSVTFDVS 100 (129)
T ss_dssp CBCTTCEEEEEEEGG
T ss_pred EECCCCEEEEEEecc
Confidence 479999999999986
No 28
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.82 E-value=4 Score=34.17 Aligned_cols=57 Identities=11% Similarity=0.141 Sum_probs=38.4
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCCCCccccccccceeeecCCCeeEEEEEeCCCCCceEEeC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDK 484 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~v~~~~~~~~~~~~~d~ 484 (517)
+-+.++.|+|+|+.+++-..+ ...|. +..|. +-.|+|||+.++++++.+ .....++.
T Consensus 42 ~~~~~~~l~N~g~~~~~f~~~--~~~~F-~i~P~-------~g~L~pg~~~~i~V~F~P-~~~g~~~~ 98 (122)
T 2ys4_A 42 STQKILLVRNIGNKNAVFHIK--TCRPF-SIEPA-------IGTLNVGESMQLEVEFEP-QSVGDHSG 98 (122)
T ss_dssp CEEEEEEEECCSSSCEEEEEE--CCTTE-EEESS-------EEEECTTCEEEEEEEECC-SSSBCCCC
T ss_pred eEEEEEEEEECCCCCEEEEEe--cCCCe-EEECC-------cCEECCCCEEEEEEEEEc-CCCccEEE
Confidence 467889999999987653222 11111 03343 357899999999999999 65555443
No 29
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=76.18 E-value=3.5 Score=38.17 Aligned_cols=51 Identities=18% Similarity=0.087 Sum_probs=30.2
Q ss_pred EEEEEEEEecCCcCcceEEEEEeeCCCC----C-CCcccccccc-------ceeeecCCCeeEEEEE
Q 010126 418 LGLHVDIKNTGDMAGTHTLLVFAKPPAG----N-WSPNKQLIGF-------KKVHVTAGALQSVRLD 472 (517)
Q Consensus 418 ~~v~v~V~NtG~~~G~evvQlY~~~~~~----~-~~P~k~L~gF-------~kv~l~pGes~~v~~~ 472 (517)
-+++++|+|||+|+ ||+=-..... . ......=.|| ..|..+||++++|++.
T Consensus 125 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 187 (225)
T 3qga_A 125 EITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLI 187 (225)
T ss_dssp CCEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred ceEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEE
Confidence 36889999999998 6761111110 0 1111111122 4567899999999886
No 30
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=75.17 E-value=3.7 Score=38.70 Aligned_cols=57 Identities=14% Similarity=0.084 Sum_probs=36.2
Q ss_pred EEEecCCcCcceEEEEEeeCCCCC--CCc--------cccccccceeeecCCCeeEEEEEeCCCCCceEEeCC
Q 010126 423 DIKNTGDMAGTHTLLVFAKPPAGN--WSP--------NKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKF 485 (517)
Q Consensus 423 ~V~NtG~~~G~evvQlY~~~~~~~--~~P--------~k~L~gF~kv~l~pGes~~v~~~~~~~~~~~~~d~~ 485 (517)
++-|.|. |.=+|+||.+.+... ..| .+.+..+.++.|.||||- +|.+.---.+|-+.
T Consensus 130 diinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESi----Tl~Pg~~H~F~ae~ 196 (246)
T 3kmh_A 130 DIINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESI----CLPPGLYHSFWAEA 196 (246)
T ss_dssp EEEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEE----EECTTEEEEEEECT
T ss_pred cEEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeE----ecCCCCEEEEEecC
Confidence 4455444 566778888876632 111 467889999999999996 66662223344433
No 31
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=74.61 E-value=3.2 Score=38.68 Aligned_cols=51 Identities=22% Similarity=0.137 Sum_probs=30.6
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCC----C-CCcccccccc-------ceeeecCCCeeEEEEEe
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAG----N-WSPNKQLIGF-------KKVHVTAGALQSVRLDI 473 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~----~-~~P~k~L~gF-------~kv~l~pGes~~v~~~~ 473 (517)
+++++|+|||+|+ ||+=-..... . ......=.|| ..|..+||++++|++.=
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 5889999999998 6762111110 0 1111111222 45778999999999863
No 32
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=68.50 E-value=6.8 Score=39.52 Aligned_cols=53 Identities=19% Similarity=0.327 Sum_probs=33.5
Q ss_pred eEEEEEEEEecCCcCcceEEEE---------EeeCCC--CC-CCcc-----ccccccceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLV---------FAKPPA--GN-WSPN-----KQLIGFKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQl---------Y~~~~~--~~-~~P~-----k~L~gF~kv~l~pGes~~v~~~~~~ 475 (517)
+++++++|||.|+.+ ||| ++.+-. .. ..|. +-|. =.. .|+||||++++++++-
T Consensus 299 ~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~-s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 299 ELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLS-NDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp EEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCC-CCC-CBCTTCEEEEEEEEEC
T ss_pred EEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCchhhhhccCCC-CCC-CcCCCcceEEEEEeeh
Confidence 799999999999765 344 221100 01 1221 1244 344 6999999999999875
No 33
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=64.20 E-value=7.2 Score=44.49 Aligned_cols=58 Identities=17% Similarity=0.283 Sum_probs=38.5
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeC--CCCC---CCcccccccc--ceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKP--PAGN---WSPNKQLIGF--KKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~--~~~~---~~P~k~L~gF--~kv~l~pGes~~v~~~~~~ 475 (517)
+++++++|+|.|..+...+.++-+.. |... ..|. .|.-+ +++.|+|||+++++++++.
T Consensus 500 ~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 500 KFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred cEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 57899999999986655444433322 2221 2343 34322 4678999999999999986
No 34
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=63.61 E-value=22 Score=30.47 Aligned_cols=56 Identities=13% Similarity=0.058 Sum_probs=33.6
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCCCCccccccc-cceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIG-FKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~g-F~kv~l~pGes~~v~~~~~~ 475 (517)
..+-+++|+|||..+..--.+ ..+.........|.= =.+-.|.|||+.+|+|++..
T Consensus 44 ~~~~~l~I~Ntg~vpa~F~f~---~~~~~~~~~~~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCHFSFI---PKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSCEEEEEE---CCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccceEEEEe---cCCCchhhhhHhhhcCCcccccCCCCeeEEEEEEEE
Confidence 357889999999998443222 222111100011111 12447999999999999997
No 35
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=56.64 E-value=9.6 Score=34.05 Aligned_cols=15 Identities=27% Similarity=0.306 Sum_probs=13.4
Q ss_pred eecCCCeeEEEEEeC
Q 010126 460 HVTAGALQSVRLDIH 474 (517)
Q Consensus 460 ~l~pGes~~v~~~~~ 474 (517)
.|.|||+.+|+|+++
T Consensus 125 ~l~pGet~svtf~~~ 139 (167)
T 3ay2_A 125 LIGGGEESSLTLDPA 139 (167)
T ss_dssp CBCTTCEEEEEECGG
T ss_pred eeCCCCEEEEEEecC
Confidence 479999999999976
No 36
>2lv4_A Putative outer membrane or exported protein; antivirulence, adhesion, protein binding; NMR {Salmonella enterica subsp}
Probab=52.31 E-value=44 Score=28.10 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=45.4
Q ss_pred CccccccccceeeecCCCeeEEEEEeCCCCC------------ceEEeCCCcE-------EecCeEEEE---EEeCCCce
Q 010126 448 SPNKQLIGFKKVHVTAGALQSVRLDIHVCKH------------LSVVDKFGIR-------RIPMGEHSL---HIGDLKHS 505 (517)
Q Consensus 448 ~P~k~L~gF~kv~l~pGes~~v~~~~~~~~~------------~~~~d~~~~~-------~~~~G~y~~---~vg~ss~~ 505 (517)
.|-..+..-.|-.|-||||.+|++-+.- -+ ....+-.|.| ...||+|.= +-|.|+..
T Consensus 47 SpDLtvisiDk~vL~PGESA~it~IvKD-id~nPIn~v~i~~~~~~~~~~g~Wd~g~~Kkg~~PGeY~q~iTY~G~s~~~ 125 (146)
T 2lv4_A 47 SPDLTVMSIDKSVLSPGESATITTIVKD-IDGNPVNEVHINKTVARENLKGLWDYGPLKKENVPGKYTQVITYRGHSNER 125 (146)
T ss_dssp CGGGCEEECCCCCBCTTCEEEEEEECBB-TTSCBCCCCCCBCCEECSCSSSEEEECCCEECSSSSEEEEEEEEETTCCCE
T ss_pred CCCcEEEecCccccCCCcceEEEEEEEe-CCCCcccceeeeeeeeccccccceeecceecCCCCcceEEEEEEcCCCCce
Confidence 4666777888999999999999987753 22 1111112444 345899864 56888898
Q ss_pred EEEEEEEcc
Q 010126 506 ISLQANLEG 514 (517)
Q Consensus 506 ~~~~~~~~~ 514 (517)
|.++.+--|
T Consensus 126 i~l~yky~g 134 (146)
T 2lv4_A 126 IDISFKYAM 134 (146)
T ss_dssp EEEEEECST
T ss_pred EEEEeeeee
Confidence 988887655
No 37
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=52.07 E-value=42 Score=33.69 Aligned_cols=56 Identities=14% Similarity=0.066 Sum_probs=34.9
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCCCCcccccccc-ceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~gF-~kv~l~pGes~~v~~~~~~ 475 (517)
..+-+++|+|||..+..-- ++..+.....+..+|.=. .+-.|.|||+..|++++..
T Consensus 47 ~~~~~l~i~N~g~~pa~f~---f~~~~~~~~~~~~wl~v~p~~g~l~Pge~~~i~l~~~v 103 (366)
T 3qis_A 47 LQKEKFQISNNGQVPCHFS---FIPKLNDSQYCKPWLRAEPFEGYLEPNETVDISLDVYV 103 (366)
T ss_dssp CEEEEEEEEECSSSCEEEE---EECCTTCSSSSCTTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eEEEEEEEEecCCceEEEE---EEeCCCCCCCCCCcEEEeCCccEECCCCEEEEEEEEEE
Confidence 4678899999999873221 222232222221222221 2447999999999999988
No 38
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=51.29 E-value=16 Score=30.30 Aligned_cols=16 Identities=13% Similarity=0.304 Sum_probs=11.5
Q ss_pred cE--Eec-CeEEEEEEeCC
Q 010126 487 IR--RIP-MGEHSLHIGDL 502 (517)
Q Consensus 487 ~~--~~~-~G~y~~~vg~s 502 (517)
.| +++ .|.|+|.|...
T Consensus 77 ~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 77 QWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CCEEECSSCC-CEEEEECC
T ss_pred eEEEEecCCCcEEEEEEec
Confidence 68 555 79999999864
No 39
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=50.99 E-value=84 Score=28.79 Aligned_cols=52 Identities=13% Similarity=0.076 Sum_probs=32.6
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCCCCcccccccc-ceeeecCCCeeEEEEEeCCCCCc
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGF-KKVHVTAGALQSVRLDIHVCKHL 479 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~gF-~kv~l~pGes~~v~~~~~~~~~~ 479 (517)
..+..+.++|+|+.+=.-. ++ ..|.- +..- .-..|+|||+..++++++. ..+
T Consensus 20 ~~~~~~~i~N~g~~pl~i~-~~--~~p~~-------~~~~~~~~~I~PG~~g~I~vt~~~-~~~ 72 (220)
T 2qsv_A 20 EGVVRLVVNNTDESDLQVA-VV--SLPSF-------VSLDDRAFRLQAREPRELNLSLAV-PRN 72 (220)
T ss_dssp CCEEEEEEEECSSSCEEEE-EE--ECCTT-------EECSCCEEEECSSSCEEEEEEECC-CTT
T ss_pred cceEEEEEEeCCCCceEEE-ec--cCCCc-------eEeeeCcceeCCCCceEEEEEEcc-hhc
Confidence 4567999999999763211 11 21211 1110 1246999999999999997 544
No 40
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=49.93 E-value=25 Score=31.96 Aligned_cols=52 Identities=21% Similarity=0.260 Sum_probs=34.6
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH-----hCCCCEEEEEec
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----ASRGPVVLVLMC 276 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~-----~~~~pvVvVl~~ 276 (517)
+...+..+..++||.+|++.-. + +..+|+.-..+|+.+.. -.+||+.++..+
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP~---Y--------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~ts 118 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTPE---Y--------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTAS 118 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEECC---B--------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEEC
T ss_pred HHHHHHHHHHHhCCEEEEEcCc---c--------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeC
Confidence 4566778889999999997632 2 35678888888888753 124555544443
No 41
>1g43_A Scaffolding protein; beta-sandwich, structural protein; 2.20A {Clostridium cellulolyticum} SCOP: b.2.2.2
Probab=49.84 E-value=6.4 Score=34.92 Aligned_cols=35 Identities=11% Similarity=0.103 Sum_probs=29.4
Q ss_pred cccce--eeecCCCeeEEEEEeCCCCCceEEeCCCcEE
Q 010126 454 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIRR 489 (517)
Q Consensus 454 ~gF~k--v~l~pGes~~v~~~~~~~~~~~~~d~~~~~~ 489 (517)
++|.. ..|+||++..|.|+|.. .+++.||...+|-
T Consensus 97 I~F~~~ag~l~pg~s~eiq~ri~~-~dws~~dqsNDyS 133 (160)
T 1g43_A 97 VALNSDAGSLPAGGSIEIQTRFAR-NDWSNFDQSNDWS 133 (160)
T ss_dssp EEECTTSCEECTTCEEEEEEEEEE-TTCCCEEGGGCTT
T ss_pred EEecCCcceECCCCcEEEEEEEec-CCCCcccccCCcc
Confidence 57765 68999999999999998 8999999876653
No 42
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=49.31 E-value=44 Score=26.31 Aligned_cols=26 Identities=19% Similarity=0.243 Sum_probs=20.0
Q ss_pred eeeecCCCeeEEEEEeCCCCCceEEeCCCcEEecCeEEEEEE
Q 010126 458 KVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHI 499 (517)
Q Consensus 458 kv~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~~~G~y~~~v 499 (517)
+..+.||++.+++|+.+. +|+|.++.
T Consensus 60 ~~~~~pg~~~~~~~t~~~----------------~G~Y~y~C 85 (100)
T 4hci_A 60 DVVVESGKEKNITVKPKS----------------AGTYELIC 85 (100)
T ss_dssp EEEECTTCEEEEEECCCS----------------CEEEEEEC
T ss_pred ceeecCCcceeEEEeccc----------------CceEEEEC
Confidence 346899999988887664 68888765
No 43
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=48.41 E-value=39 Score=27.60 Aligned_cols=25 Identities=12% Similarity=0.325 Sum_probs=16.0
Q ss_pred Eec-CeEEEEEEeC--------CCceEEEEEEEc
Q 010126 489 RIP-MGEHSLHIGD--------LKHSISLQANLE 513 (517)
Q Consensus 489 ~~~-~G~y~~~vg~--------ss~~~~~~~~~~ 513 (517)
+++ .|+|+|.|.- ...+-+|++++|
T Consensus 78 ~LP~sG~Y~I~V~~~r~~ar~~~~~~Y~L~v~i~ 111 (111)
T 4g9s_B 78 SLPASGKYELRVLQTRNDARKNKTKKYNVDIQIK 111 (111)
T ss_dssp ECSSSEEEEEEEECCHHHHHTTCEEEEEEEEEEC
T ss_pred EecCCccEEEEEEeccchhccCCCcCEEEEEEEC
Confidence 455 7999999951 223566666654
No 44
>4b9f_A Cellulosomal-scaffolding protein A; sugar binding protein, cellulosome; 1.19A {Clostridium thermocellum atcc 27405} PDB: 1nbc_A
Probab=47.98 E-value=9.9 Score=33.37 Aligned_cols=36 Identities=14% Similarity=0.064 Sum_probs=30.6
Q ss_pred cccceeeecCCCeeEEEEEeCCCCCceEEeCCCcEEe
Q 010126 454 IGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRI 490 (517)
Q Consensus 454 ~gF~kv~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~ 490 (517)
++|.-..|.||++.+|.|+|.. .+++.||...+|-.
T Consensus 94 I~Ft~g~l~pg~~~eiQ~ri~~-~~~s~~d~snDyS~ 129 (152)
T 4b9f_A 94 ISFTGGTLEPGAHVQIQGRFAK-NDWSNYTQSNDYSF 129 (152)
T ss_dssp EEESSCEECTTCEEEEEEEEEE-TTCCCEESTTCTTC
T ss_pred EEccCceEcCCCcEEEEEEEEC-CCCcceeEcCCcCc
Confidence 5677778999999999999998 89999998876643
No 45
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=47.00 E-value=28 Score=32.08 Aligned_cols=51 Identities=12% Similarity=0.112 Sum_probs=33.8
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCCCCccccccccceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~v~~~~~~ 475 (517)
..+.+++++|+|+.+-. +..+-. ... -....+.|-.|+|||+.+|+++++.
T Consensus 135 ~~~~~f~i~N~G~~pL~-I~~v~~---scg----ct~~~~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 135 TTKAAIEIRNVGAGPLR-LHSVTT---RNP----ALTAVPDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp CEEEEEEEEECSSSCEE-EEEEEE---CST----TEEEEESCSEECTTCEEEEEEEECH
T ss_pred eEEEEEEEEECCCCCEE-EEEEEe---CCC----CEeeecCCccCCCCCEEEEEEEEec
Confidence 57889999999987622 111211 111 0112256778999999999999997
No 46
>1qhq_A Protein (auracyanin); electron transfer, cupredoxin, blue copper protein, azurin-L thermophIle; 1.55A {Chloroflexus aurantiacus} SCOP: b.6.1.1 PDB: 1ov8_A
Probab=46.69 E-value=37 Score=28.65 Aligned_cols=26 Identities=19% Similarity=0.103 Sum_probs=21.4
Q ss_pred eeecCCCeeEEEEEeCCCCCceEEeCCCcEEecCeEEEEEEe
Q 010126 459 VHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 500 (517)
Q Consensus 459 v~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~~~G~y~~~vg 500 (517)
+.|.||++.+++|+++. +|.|.++.+
T Consensus 98 ~~l~pG~~~~~~~~~~~----------------~G~y~f~C~ 123 (140)
T 1qhq_A 98 AMLNAGESGSVTFRTPA----------------PGTYLYICT 123 (140)
T ss_dssp CCBCTTEEEEEEEECCS----------------SEEEEEECC
T ss_pred eeeCCCceeEEEEEeCC----------------CeeEEEEeC
Confidence 46899999999999865 588888776
No 47
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=46.56 E-value=61 Score=30.01 Aligned_cols=55 Identities=16% Similarity=0.130 Sum_probs=35.2
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCCCCCccccccccce-eeecCCCeeEEEEEeCC
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKK-VHVTAGALQSVRLDIHV 475 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~k-v~l~pGes~~v~~~~~~ 475 (517)
.++++|+|+|+.+ -.||.++.+......+..-+.--== ..|+||++++|.|....
T Consensus 29 ~~sl~l~N~~~~p--~LvQswv~~~~~~~~~~~pFivtPPl~Rl~p~~~q~lRI~~~~ 84 (218)
T 4ay0_A 29 GVMVSVKNTQDYP--VLIQSRIYDENKEKESEDPFVVTPPLFRLDAKQQNSLRIAQAG 84 (218)
T ss_dssp CEEEEEECCSSSC--EEEEEEEECTTSCCCSSCSEEEESSEEEECTTCEEEEEEEECS
T ss_pred EEEEEEEcCCCCC--EEEEEEEecCCCCccccCCEEECCCeEEeCCCCceEEEEEecC
Confidence 4889999999764 7999999765432111000110011 24899999999997654
No 48
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=46.35 E-value=99 Score=29.10 Aligned_cols=57 Identities=9% Similarity=-0.017 Sum_probs=37.6
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCC-CCccccccccceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~v~~~~~~ 475 (517)
.+.+.++|-|..+..-+-.|+|..++.... ..+.. .--+++.|.||++++|.|.|.+
T Consensus 97 ~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~~--~~~~~v~v~a~~~~~v~f~i~p 154 (252)
T 3hrz_B 97 QVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKGQ--RYRQQFPIKALSSRAVPFVIVP 154 (252)
T ss_dssp CEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSSC--CEEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcccCceEEEEEEEEcCCceEeecCCCC--ceEEEEEECCCCeEEEEEEEEe
Confidence 699999999988766555555554432211 11111 1124567999999999999987
No 49
>2cal_A Rusticyanin; iron respiratory electron transport chain, blue protein, electron transport, metal- binding, periplasmic; 1.10A {Thiobacillus ferrooxidans} PDB: 1cur_A 1gy2_A 1a3z_A 1e30_A 1gy1_A 1rcy_A 1a8z_A 2cak_A
Probab=45.85 E-value=43 Score=29.11 Aligned_cols=64 Identities=14% Similarity=0.062 Sum_probs=33.3
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCCCCCccc-cccccce--eeecCCC--eeEEEEEeCCCCCceEEeCCCcEEecCe
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNK-QLIGFKK--VHVTAGA--LQSVRLDIHVCKHLSVVDKFGIRRIPMG 493 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k-~L~gF~k--v~l~pGe--s~~v~~~~~~~~~~~~~d~~~~~~~~~G 493 (517)
+|.+.++|.|+...-.++..=...+... -|.. ....... ..|.||| +.+++|++ . +|
T Consensus 70 ~V~~~~tN~~~~~~H~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~i~PG~sgt~t~tft~-~----------------pG 131 (154)
T 2cal_A 70 TVDVTFINTNKGFGHSFDITKKGPPYAV-MPVIDPIVAGTGFSPVPKDGKFGYTDFTWHP-T----------------AG 131 (154)
T ss_dssp EEEEEEEECCTTCCCCCEEESCCSCCCS-SCCCCSEEEEBCCCCCCBTTBEEEEEEEECC-C----------------SE
T ss_pred EEEEEEEcCCCCeeeEEEEeecCcchhc-cccccccccccccccccCCCCceEEEEEEEE-C----------------Cc
Confidence 6889999986433344443311111111 1110 0111111 1579999 77777776 5 57
Q ss_pred EEEEEEe
Q 010126 494 EHSLHIG 500 (517)
Q Consensus 494 ~y~~~vg 500 (517)
+|.++..
T Consensus 132 tY~y~C~ 138 (154)
T 2cal_A 132 TYYYVCQ 138 (154)
T ss_dssp EEEEECC
T ss_pred eEEEECC
Confidence 8777765
No 50
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=45.47 E-value=73 Score=30.27 Aligned_cols=54 Identities=11% Similarity=0.102 Sum_probs=36.1
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCCCCCcccc---cccccee-eecCCCeeEEEEEeC
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQ---LIGFKKV-HVTAGALQSVRLDIH 474 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~---L~gF~kv-~l~pGes~~v~~~~~ 474 (517)
.++++|+|+|+. .-.||.++.+......|... +.--=-+ .|+||++++|.|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 589999999986 58999999864432222211 2222223 489999999998654
No 51
>3zqx_A Cellulose 1,4-beta-cellobiosidase; hydrolase, cellulose binding protein; 1.04A {Clostridium thermocellum} PDB: 2ylk_A
Probab=44.94 E-value=5.8 Score=34.67 Aligned_cols=36 Identities=22% Similarity=0.296 Sum_probs=29.6
Q ss_pred cccceeeecCCC-eeEEEEEeCCCCCceEEeCCCcEEe
Q 010126 454 IGFKKVHVTAGA-LQSVRLDIHVCKHLSVVDKFGIRRI 490 (517)
Q Consensus 454 ~gF~kv~l~pGe-s~~v~~~~~~~~~~~~~d~~~~~~~ 490 (517)
++|....|.||+ +..|.|+|.. .+++-||...+|-.
T Consensus 81 I~f~~g~l~pg~~s~eiQ~Ri~~-~dws~~dqsnDyS~ 117 (146)
T 3zqx_A 81 LEFKDVKLPAGGQTGEIQFVIRY-ADWSFHDQSNDYSF 117 (146)
T ss_dssp EEECSCEECTTCBCCCEEEEEEE-TTCCCEEGGGCTTC
T ss_pred EEeCCcEEcCCCceEEEEEEEEc-CCCccccccCCccc
Confidence 577778899984 7899999998 89999998766643
No 52
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=44.93 E-value=34 Score=30.82 Aligned_cols=55 Identities=11% Similarity=0.093 Sum_probs=39.0
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH---------------hCCCCEEEEEecCc
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 278 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvVl~~g~ 278 (517)
.++.+..+...+||.+|++.-. + ++.+|..-..+|+.+.. ..+|+++++..+|+
T Consensus 62 ~~~~~~~~~l~~AD~iV~~~P~---y--------~~~~pa~LK~~iD~v~~~g~~~~~~~~~~~~~l~gK~~~~i~t~g~ 130 (196)
T 3lcm_A 62 AEMEKYRDLVTWADHLIFIFPI---W--------WSGMPAILKGFIDRVFVADFAYSYKKVGLEGHLQGKSAWIITTHNT 130 (196)
T ss_dssp GGGHHHHHHHHHCSEEEEEEEC---B--------TTBCCHHHHHHHHHHSCBTTTEEECSSSEEESCTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECch---h--------hccccHHHHHHHHHHccCCcceecCCCCcccCCCCCEEEEEEcCCC
Confidence 4556778889999999997632 1 35678878888888742 13567777777777
Q ss_pred e
Q 010126 279 P 279 (517)
Q Consensus 279 P 279 (517)
|
T Consensus 131 ~ 131 (196)
T 3lcm_A 131 P 131 (196)
T ss_dssp C
T ss_pred c
Confidence 7
No 53
>1iby_A Nitrosocyanin; RED copper, cupredoxin, beta hairpin, metal binding protein; 1.65A {Nitrosomonas europaea} SCOP: b.6.1.4 PDB: 1ibz_A 1ic0_A
Probab=42.73 E-value=40 Score=27.13 Aligned_cols=41 Identities=15% Similarity=0.323 Sum_probs=25.9
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCCCCCccccccccceeeecCCCeeEEEEEeCC
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~v~~~~~~ 475 (517)
+|.+.++|.+.. -+-+. +. . + |+ +..+.||++.+++|+.+.
T Consensus 47 ~V~~~~~n~d~~--~H~~~--i~--~--------~-~~-~~~i~pG~~~~~~f~~~~ 87 (112)
T 1iby_A 47 AVKVVVENKSPI--SEGFS--ID--A--------F-GV-QEVIKAGETKTISFTADK 87 (112)
T ss_dssp EEEEEEEECSSS--CEEEE--EG--G--------G-TE-EEEECTTCEEEEEEECCS
T ss_pred EEEEEEEECCCC--eEEEE--Ec--C--------C-Cc-eeEeCCCCEEEEEEECCC
Confidence 578888998764 11111 11 0 1 22 567999999999998654
No 54
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=41.21 E-value=31 Score=31.48 Aligned_cols=54 Identities=17% Similarity=0.155 Sum_probs=37.1
Q ss_pred HHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH---------------hCCCCEEEEEecCcee
Q 010126 216 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGGPV 280 (517)
Q Consensus 216 ~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvVl~~g~Py 280 (517)
..+..+....||.+|++.-.. ++.+|..-..+|+.+.. ..+|+++++..+|+||
T Consensus 83 ~~~~~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~~~~~~~~~~g~~g~l~gK~~~~i~t~g~~~ 151 (211)
T 3p0r_A 83 ADKYLNQFLEADKVVFGFPLW-----------NLTIPAVLHTYIDYLNRAGKTFKYTPEGPVGLIGDKKIALLNARGGVY 151 (211)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHCCBTTTEECCTTCCEESCTTCEEEEEEEESSCC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------cccCCHHHHHHHHHHhccCceeccCCCCCccCCCCCEEEEEEeCCCCC
Confidence 456678889999999976322 35678777788888742 1246666666667775
No 55
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=41.04 E-value=32 Score=30.96 Aligned_cols=38 Identities=18% Similarity=0.184 Sum_probs=27.5
Q ss_pred cHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHH
Q 010126 215 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 263 (517)
Q Consensus 215 ~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~ 263 (517)
.+.+..+...+||.+|++.-. + +..+|..-..+|+.+.
T Consensus 84 ~~~~~~~~l~~aD~iv~~~P~---y--------~~~~pa~lK~~iD~~~ 121 (208)
T 2hpv_A 84 RFNELTDQFLSADKVVIANPM---W--------NLNVPTRLKAWVDTIN 121 (208)
T ss_dssp HHHHHHHHHHHCSEEEEEEEC---B--------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCEEEEEecc---c--------cCCCCHHHHHHHHHHh
Confidence 345667788999999996632 2 3467887788888875
No 56
>3e9t_A Na/Ca exchange protein; CBD1, CALX, membrane, transmembrane, membrane protein; 1.60A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=40.33 E-value=90 Score=25.46 Aligned_cols=52 Identities=12% Similarity=0.114 Sum_probs=32.9
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCCC-C---CccccccccceeeecCCCe-eEEEEEeCC
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-W---SPNKQLIGFKKVHVTAGAL-QSVRLDIHV 475 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~~-~---~P~k~L~gF~kv~l~pGes-~~v~~~~~~ 475 (517)
.+.|+|+-+|...|.-.|..-..+-.+. + .|. -..+..+|||+ ++++++|-.
T Consensus 20 ~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~-----~g~l~F~~Get~k~i~V~I~d 76 (114)
T 3e9t_A 20 EFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGR-----KGLLSFPPGVDEQRFRIEVID 76 (114)
T ss_dssp EEEEEEEEEECCSSCEEEEEEEECSSSCBTTTBCCC-----EEEEEECTTCCEEEEEEEBCC
T ss_pred EEEEEEEEECCCCeeEEEEEEeECCccCCCCCceEc-----ceEEEEeCCcEEEEEEEEEEc
Confidence 4667777778878777777655554443 2 222 13566799997 666666654
No 57
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=39.25 E-value=26 Score=39.43 Aligned_cols=52 Identities=17% Similarity=0.193 Sum_probs=31.0
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCCCCcc---cccccc---------ceeeecCCCeeEEEEE
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPN---KQLIGF---------KKVHVTAGALQSVRLD 472 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~---k~L~gF---------~kv~l~pGes~~v~~~ 472 (517)
.-.++++|+|||+|+ +||=-....-...|. -+.++| ..|..+|||+|+|++.
T Consensus 150 ~~~~~~~v~~~~~r~----~~v~sh~hf~e~n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 150 RKAVILKVTSKGDRP----IQVGSHYHFIEVNPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp CEEEEEEEEECCSSC----EEEETTSCGGGSCTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CceEEEEEEeCCCCc----eEeccccchhhcCcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 347999999999998 676111111001110 011222 3567799999999985
No 58
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=39.06 E-value=41 Score=29.74 Aligned_cols=36 Identities=11% Similarity=0.206 Sum_probs=25.5
Q ss_pred HHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHH
Q 010126 217 GAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 263 (517)
Q Consensus 217 ~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~ 263 (517)
.+..+...+||.+|++.-. + ...+|..-..+|+.+.
T Consensus 78 ~~~~~~l~~aD~iv~~~P~---y--------~~~~p~~lK~~iD~~~ 113 (201)
T 1t5b_A 78 DELIAELKAHDVIVIAAPM---Y--------NFNIPTQLKNYFDLIA 113 (201)
T ss_dssp HHHHHHHHHCSEEEEECCC---B--------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHhCCEEEEEeCc---c--------cCcCCHHHHHHHHHhe
Confidence 4556778899999996532 2 2457777788888875
No 59
>3zuc_A Cellulosomal scaffoldin; crystalline cellulose-binding protein, sugar binding protein cellulosome; HET: EDO 1PE; 1.00A {Acetivibrio cellulolyticus} SCOP: b.2.2.0 PDB: 3zu8_A* 3zqw_A*
Probab=37.90 E-value=12 Score=32.99 Aligned_cols=36 Identities=11% Similarity=0.035 Sum_probs=29.4
Q ss_pred cccce--eeecCCCeeEEEEEeCCCCCceEEeCCCcEEe
Q 010126 454 IGFKK--VHVTAGALQSVRLDIHVCKHLSVVDKFGIRRI 490 (517)
Q Consensus 454 ~gF~k--v~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~ 490 (517)
++|.- -.|.||++..|.|+|.. .+++-||...+|-.
T Consensus 89 I~F~~~ag~l~pg~~~eiq~Ri~~-~dws~~dqsnDySf 126 (153)
T 3zuc_A 89 IAFSSAAGTLAANTSIEVQGRFAK-SDWTNYNQADDYSF 126 (153)
T ss_dssp EEECGGGCEECTTEEEEEEEEEEE-TTCCCEEGGGCTTC
T ss_pred EEeCCCCceECCCCceEEEEEEEc-CCCcccccccCccc
Confidence 46665 47999999999999998 89999998766643
No 60
>1rli_A Trp repressor binding protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bacillus subtilis} SCOP: c.23.5.6
Probab=37.24 E-value=57 Score=28.36 Aligned_cols=38 Identities=8% Similarity=0.012 Sum_probs=26.1
Q ss_pred cHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHH
Q 010126 215 LIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 263 (517)
Q Consensus 215 ~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~ 263 (517)
++.+..+...+||.+|++.-.. ...+|..-..+|+.+.
T Consensus 61 ~~~~~~~~l~~aD~ii~~~P~y-----------~~~~p~~lK~~iD~~~ 98 (184)
T 1rli_A 61 DYDSIIERILQCHILIFATPIY-----------WFGMSGTLKLFIDRWS 98 (184)
T ss_dssp CHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHTHH
T ss_pred CHHHHHHHHHhCCEEEEEeCcc-----------ccCCcHHHHHHHHHhH
Confidence 4566677889999999976322 2456776677777653
No 61
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=37.14 E-value=43 Score=30.96 Aligned_cols=37 Identities=14% Similarity=0.335 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHH
Q 010126 216 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 263 (517)
Q Consensus 216 ~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~ 263 (517)
..+..+....||.+|++.-.. ++.+|..-..+++.+.
T Consensus 85 ~~~l~~~~~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~ 121 (223)
T 3u7i_A 85 MSEILQQFKSANTYVIVLPLH-----------NFNIPSKLKDYMDNIM 121 (223)
T ss_dssp HHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEcChh-----------hccCCHHHHHHHHHHh
Confidence 456678889999999976322 3567887788888875
No 62
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=36.97 E-value=1.2e+02 Score=25.66 Aligned_cols=52 Identities=12% Similarity=0.114 Sum_probs=34.4
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCCC-C---CccccccccceeeecCCCe-eEEEEEeCC
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-W---SPNKQLIGFKKVHVTAGAL-QSVRLDIHV 475 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~~-~---~P~k~L~gF~kv~l~pGes-~~v~~~~~~ 475 (517)
++.++|+-+|...|.-.|.....+-.+. + .|. -..+..+|||+ ++++++|-.
T Consensus 22 ~~~v~V~R~g~~~~~v~V~y~t~~gTA~~g~Dy~~~-----~g~l~F~~Get~k~i~V~I~d 78 (137)
T 3ead_A 22 EFEVRVVRRGDISTYASVEYETQDGTASAGTDFVGR-----KGLLSFPPGVDEQRFRIEVID 78 (137)
T ss_dssp EEEEEEEEESCCSSCEEEEEEEECSSSCBTTTBCCC-----EEEEEECTTCCEEEEEEEBCC
T ss_pred EEEEEEEEECCCCceEEEEEEeECCCcCCCCcEeEe-----eEEEEECCCceEEEEEEEEec
Confidence 4677888888888888888666655443 2 122 14567799997 666666654
No 63
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=34.17 E-value=70 Score=28.42 Aligned_cols=57 Identities=14% Similarity=0.089 Sum_probs=40.1
Q ss_pred cccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH----------hCCCCEEEEEecCcee
Q 010126 213 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK----------ASRGPVVLVLMCGGPV 280 (517)
Q Consensus 213 ~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~----------~~~~pvVvVl~~g~Py 280 (517)
..++.+..+....||.+|+..-.. .+.+|..-..+++.+.. ..+|+++++..+|+|.
T Consensus 39 ~~D~~~~~~~l~~aD~iV~~~P~y-----------~~~~pa~lK~~iDrv~~~g~~~~~~~~l~gK~~~~~~t~g~~~ 105 (177)
T 3ha2_A 39 DFNVEQEQSLLLQNDRIILEFPLY-----------WYSAPALLKQWMDTVMTTKFATGHQYALEGKELGIVVSTGDNG 105 (177)
T ss_dssp TCCHHHHHHHHHTCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCHHHHSTTTCTTTTCEEEEEEEESSCG
T ss_pred cccHHHHHHHHHhCCEEEEECChh-----------hccCCHHHHHHHHHHhhcccccCCCcCCCCCEEEEEEeCCCCh
Confidence 456777788999999999965321 34677777778877631 1357777777777775
No 64
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=34.15 E-value=69 Score=28.71 Aligned_cols=41 Identities=22% Similarity=0.290 Sum_probs=29.7
Q ss_pred cccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH
Q 010126 213 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 264 (517)
Q Consensus 213 ~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~ 264 (517)
++.+.+..+...+||.+|++.-.. +..+|+.-..+++.+..
T Consensus 60 ~~~~~~l~~~i~~AD~iv~~sP~y-----------~~~~~~~lK~~iD~~~~ 100 (193)
T 3svl_A 60 PATVEALAEQIRQADGVVIVTPEY-----------NYSVPGGLKNAIDWLSR 100 (193)
T ss_dssp CHHHHHHHHHHHHSSEEEEEECCB-----------TTBCCHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHCCEEEEEeccc-----------CCCCCHHHHHHHHHHhh
Confidence 345667788999999999966322 34678777888888753
No 65
>2l8a_A Endoglucanase; carbohydrate-binding module, family 3, hydrolase; NMR {Bacillus subtilis}
Probab=34.01 E-value=9.4 Score=33.40 Aligned_cols=36 Identities=22% Similarity=0.372 Sum_probs=29.6
Q ss_pred cccceeeecCC-CeeEEEEEeCCCCCceEEeCCCcEEe
Q 010126 454 IGFKKVHVTAG-ALQSVRLDIHVCKHLSVVDKFGIRRI 490 (517)
Q Consensus 454 ~gF~kv~l~pG-es~~v~~~~~~~~~~~~~d~~~~~~~ 490 (517)
++|....|.|| ++..|.|+|.. .+++-||...+|-.
T Consensus 86 I~f~~g~l~pg~~s~eiq~ri~~-~dws~~dqsNDyS~ 122 (149)
T 2l8a_A 86 LGFKNGTLAPGASTGNIQLRLHN-DDWSNYAQSGDYSF 122 (149)
T ss_dssp EEECCSCSSTTSSSSCEEEEEEC-CTTSCCCTTTTTTT
T ss_pred EEeCCCeECCCCCceEEEEEEEc-CCCCccccCCCccc
Confidence 57877889998 45899999998 89999998776643
No 66
>2q3z_A Transglutaminase 2; transglutaminase 2, tissue transglutaminase, TG2, transferas; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1kv3_A 3ly6_A*
Probab=33.61 E-value=61 Score=35.39 Aligned_cols=57 Identities=11% Similarity=-0.070 Sum_probs=42.3
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCC--CCccccccccc--eeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFK--KVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~--~~P~k~L~gF~--kv~l~pGes~~v~~~~~~ 475 (517)
.+.+++.++|..+.. ..|+++++.-.-. +.+..++.... .+.|.|+|++++.++|..
T Consensus 488 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~~l~p~~~~~v~~~i~y 548 (687)
T 2q3z_A 488 DFDVFAHITNNTAEE--YVCRLLLCARTVSYNGILGPECGTKYLLNLTLEPFSEKSVPLCILY 548 (687)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccceEeeeeeeEEEECCCceEEEEEEECH
Confidence 589999999988765 6788887754322 56666652223 457999999999999987
No 67
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=33.04 E-value=66 Score=28.69 Aligned_cols=39 Identities=18% Similarity=0.302 Sum_probs=28.9
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHH
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 263 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~ 263 (517)
..+.+..+...+||.+|++.-. + +..+|+.-..+++.+.
T Consensus 56 ~~~~~~~~~i~~AD~iV~~sP~---y--------~~~~p~~lK~~iD~~~ 94 (192)
T 3fvw_A 56 PEVAHAREEVQEADAIWIFSPV---Y--------NYAIPGPVKNLLDWLS 94 (192)
T ss_dssp HHHHHHHHHHHHCSEEEEECCC---B--------TTBCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCEEEEECcc---c--------ccCCCHHHHHHHHHhh
Confidence 4556778889999999996522 2 3567888888888876
No 68
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=32.09 E-value=37 Score=30.13 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=26.8
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHH
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 263 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~ 263 (517)
..+.+..+...+||.+|++.- .+ +..+|+.-..+|+.+.
T Consensus 61 ~~~~~~~~~l~~aD~ii~~sP---~y--------~~~~p~~lK~~iD~~~ 99 (193)
T 1rtt_A 61 PAVERFREQIRAADALLFATP---EY--------NYSMAGVLKNAIDWAS 99 (193)
T ss_dssp HHHHHHHHHHHHCSEEEEECC---EE--------TTEECHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCEEEEEcc---cc--------ccCcCHHHHHHHHHhc
Confidence 345666778899999999652 22 2346776777888774
No 69
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=31.12 E-value=53 Score=29.59 Aligned_cols=52 Identities=10% Similarity=0.109 Sum_probs=34.1
Q ss_pred cccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH--hCCCCEEEEEe
Q 010126 213 NQLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK--ASRGPVVLVLM 275 (517)
Q Consensus 213 ~~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~--~~~~pvVvVl~ 275 (517)
+..+.+..+.+.+||.+|++.-. + +..+|+.-..+|+.+.. -.+||++++..
T Consensus 73 ~~~~~~~~~~i~~AD~ivi~sP~---Y--------~~~~~~~lK~~iD~~~~~~l~gK~~~~v~t 126 (191)
T 3k1y_A 73 TTKLEEITSALSASDGLVVATPV---F--------KASYTGLFKMFFDILDTDALTGMPTIIAAT 126 (191)
T ss_dssp CHHHHHHHHHHHHCSEEEEEEEC---B--------TTBSCHHHHHHHHHSCTTTTTTCEEEEEEE
T ss_pred CHHHHHHHHHHHHCCEEEEEcCc---c--------CCcCcHHHHHHHHHhhhhhcCCCEEEEEEe
Confidence 34567788899999999997632 2 34567767777776641 13566655544
No 70
>2hr0_B Complement C3 alpha' chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2icf_B* 2wii_B* 2win_B* 3g6j_B 3l5n_B* 2a73_B* 2i07_B* 2xwj_B* 2xwb_B* 2a74_C* 2ice_C* 2qki_C* 3l3o_F* 3nms_C* 3nsa_C* 3ohx_C* 3t4a_C 2ice_B* 3l3o_B* 3nms_B* ...
Probab=30.60 E-value=1.8e+02 Score=32.71 Aligned_cols=57 Identities=11% Similarity=0.007 Sum_probs=40.3
Q ss_pred eEEEEEEEEecCC-cCcceEEEEEeeCCCCC-CCccccccccceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGD-MAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~-~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~v~~~~~~ 475 (517)
.+.+.++|.|..+ .+++-.|+|....+... ..+. ...=+++.|+||++++|.|+|.+
T Consensus 96 ~~~i~~~v~N~~~~~~~~v~v~l~~~~~~~~~~~~~--~~~~~~v~l~~~~~~~v~f~i~~ 154 (915)
T 2hr0_B 96 QVEIRAVLYNYRQNQELKVRVELLHNPAFCSLATTK--RRHQQTVTIPPKSSLSVPYVIVP 154 (915)
T ss_dssp CEEEEEEEEECCSSCCEEEEEEECCCTTEECSCCSS--SCEEEEEEECTTEEEEEEEEEEE
T ss_pred EEEEEEEEEcCCCCeeEEEEEEEecCCceEeecCCC--CcceeEEEECCCCeEEEEEEEEE
Confidence 6999999999988 88777777765443221 1110 01125678999999999999987
No 71
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=30.50 E-value=66 Score=30.61 Aligned_cols=55 Identities=22% Similarity=0.201 Sum_probs=38.7
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH---------------hCCCCEEEEEecCc
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 278 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvVl~~g~ 278 (517)
.++.+..+.+..||.+|+..-.. ++.+|..-..+|+.+.. ..+|++++++.+|+
T Consensus 82 dd~~~~~~~l~~AD~IV~~~P~y-----------~~s~Pa~LK~~iDrv~~~g~~f~~~~~~~~g~l~gK~~~~i~t~Gg 150 (273)
T 1d4a_A 82 PDIVAEQKKLEAADLVIFQFPLQ-----------WFGVPAILKGWFERVFIGEFAYTYAAMYDKGPFRSKKAVLSITTGG 150 (273)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTBCTTSCGGGSTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECchh-----------hccCCHHHHHHHHHHHhcCcccccCCCCCccccCCCEEEEEEeCCC
Confidence 34566677889999999976322 35677777788887642 13677888877787
Q ss_pred e
Q 010126 279 P 279 (517)
Q Consensus 279 P 279 (517)
|
T Consensus 151 ~ 151 (273)
T 1d4a_A 151 S 151 (273)
T ss_dssp C
T ss_pred C
Confidence 7
No 72
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=29.86 E-value=1.3e+02 Score=27.65 Aligned_cols=52 Identities=12% Similarity=0.141 Sum_probs=34.8
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCCC-CCccccccccce-eeecCCCeeEEEEEeCC
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKK-VHVTAGALQSVRLDIHV 475 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~k-v~l~pGes~~v~~~~~~ 475 (517)
.++++|+|+|+. .-.||.++.+.... ..| +.--== ..|+||++++|.|....
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~p---fivtPPl~rl~p~~~q~lRI~~~~ 82 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAP---FLVMPPLFRLEANQQSQLRIVRTG 82 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCS---EEEESSEEEECTTCEEEEEEEECC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCC---EEEeCCEEEECCCCceEEEEEECC
Confidence 478999999976 67999999864322 111 111111 25899999999996543
No 73
>1vjj_A Protein-glutamine glutamyltransferase E; transglutaminase 3, X-RAY crystallography, metalloenzyme, calcium ION; HET: GDP; 1.90A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1sgx_A* 1l9m_A 1l9n_A* 1nud_A 1nuf_A 1nug_A 1rle_A*
Probab=29.11 E-value=91 Score=34.03 Aligned_cols=57 Identities=11% Similarity=-0.030 Sum_probs=40.5
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCC--CCccccccc-cceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIG-FKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~--~~P~k~L~g-F~kv~l~pGes~~v~~~~~~ 475 (517)
.+.+++.++|..+.. ..|+++++.-.-. +.+..++.- =..+.|.|+|++++.++|..
T Consensus 497 df~v~l~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~v~L~p~~~~~i~~~i~y 556 (692)
T 1vjj_A 497 EVNLVLLLKNLSRDT--KTVTVNMTAWTIIYNGTLVHEVWKDSATMSLDPEEEAEHPIKISY 556 (692)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCCEEEEEEEEEEEEEECTTCEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCccccceEEeeEEEEECCCceEEEEEEECH
Confidence 589999999987755 5778877653322 455444421 13457999999999999987
No 74
>3fso_A Integrin beta-4, GP150; immunoglobulin fold, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane; 1.41A {Homo sapiens} SCOP: b.1.27.0 PDB: 3fq4_A 3h6a_A
Probab=28.41 E-value=1.8e+02 Score=23.98 Aligned_cols=52 Identities=6% Similarity=0.012 Sum_probs=30.9
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCCC-C---CccccccccceeeecCCCe-eEEEEEeCC
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-W---SPNKQLIGFKKVHVTAGAL-QSVRLDIHV 475 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~~-~---~P~k~L~gF~kv~l~pGes-~~v~~~~~~ 475 (517)
.+.|+|+-+|...|.-.|.....+-.+. + .|. -..+..+|||+ |+++++|--
T Consensus 23 ~~~v~V~R~gg~~g~v~V~y~T~dgTA~ag~Dy~~~-----~g~l~F~~Get~k~i~V~I~d 79 (123)
T 3fso_A 23 VARIPVIRRVLDGGKSQVSYRTQDGTAQGNRDYIPV-----EGELLFQPGEAWKELQVKLLE 79 (123)
T ss_dssp EEEEEEEEESCCSSCEEEEEEEEESSSCBTTTBCCC-----EEEEEECTTCCEEEEEEEBCC
T ss_pred EEEEEEEEeCCCCceEEEEEEeeCCcEeCCcccccc-----ceEEEECCCCeEEEEEEEEEC
Confidence 4777888888888886666443433332 1 121 13455699997 556666553
No 75
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=28.24 E-value=82 Score=29.03 Aligned_cols=55 Identities=9% Similarity=0.027 Sum_probs=37.2
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH------hCCCCEEEEEecCce
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK------ASRGPVVLVLMCGGP 279 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~------~~~~pvVvVl~~g~P 279 (517)
.++.+..+.+.+||.+|++.-.. +..+|+.-..+++.+.. ..+|+++++...|++
T Consensus 68 ~~~~~~~~~l~~AD~iI~~sP~y-----------~~~~p~~lK~~iDr~~~~~~~~~l~gK~~~~i~t~g~~ 128 (242)
T 1sqs_A 68 DDGGVIKKELLESDIIIISSPVY-----------LQNVSVDTKNFIERIGGWSHLFRLAGKFVVTLDVAESN 128 (242)
T ss_dssp STHHHHHHHHHHCSEEEEEEEEC-----------SSSCCHHHHHHHHHTGGGTTTTTTTTCEEEEEEEESSC
T ss_pred HHHHHHHHHHHHCCEEEEEcccc-----------ccCCCHHHHHHHHHHHHhccccccCCCEEEEEEeCCCC
Confidence 45677788899999999976322 24667777788887631 136777776665554
No 76
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=28.20 E-value=74 Score=28.66 Aligned_cols=56 Identities=14% Similarity=0.157 Sum_probs=38.7
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH-----------hCCCCEEEEEecCcee
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK-----------ASRGPVVLVLMCGGPV 280 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~-----------~~~~pvVvVl~~g~Py 280 (517)
.++.+..+....||.+|+..-. + .+.+|..-..+++.+.. ..+|+++++..+|+|.
T Consensus 47 ~dv~~~~~~l~~AD~iv~~~P~---y--------~~~~pa~lK~~iDrv~~~g~~y~~~g~~l~gK~~~~~~t~G~~~ 113 (192)
T 3f2v_A 47 IDVAAEQKLIETHDSLVWQFPI---Y--------WFNCPPLLKQWLDEVLTYGWAYGSKGKALKGRKIALAVSLGAPA 113 (192)
T ss_dssp CCHHHHHHHHHTSSSEEEEEEC---B--------TTBCCHHHHHHHHHHSCBTTTBSSSCCSSTTCEEEEEEEESSCG
T ss_pred hhHHHHHHHHHhCCEEEEEcCh---h--------hcCCCHHHHHHHHHHhhcCccccCCCCCCCCCEEEEEEeCCCCh
Confidence 4577778899999999996532 1 34677777788888732 1346677776667763
No 77
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=27.96 E-value=47 Score=27.94 Aligned_cols=27 Identities=7% Similarity=-0.049 Sum_probs=20.8
Q ss_pred eeeecCCCeeEEEEEeCCCCCceEEeCCCcEEecCeEEEEEEe
Q 010126 458 KVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 500 (517)
Q Consensus 458 kv~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~~~G~y~~~vg 500 (517)
...|.|||+.+++|+.+. +|+|.++..
T Consensus 98 t~~l~pGet~~v~f~~~~----------------pG~y~f~C~ 124 (139)
T 2aan_A 98 SPLANGNETVEVTFTAPA----------------AGTYLYICT 124 (139)
T ss_dssp CCCBCTTCEEEEEEECCS----------------SEEEEEECC
T ss_pred ccccCCCCEEEEEEECCC----------------CeEEEEEcC
Confidence 345899999999998754 577777764
No 78
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=27.93 E-value=48 Score=27.29 Aligned_cols=76 Identities=18% Similarity=0.152 Sum_probs=42.1
Q ss_pred HHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHHhCCCCEEEEEecCceeeccCcCC-CCCccEEEEecC
Q 010126 221 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAKASRGPVVLVLMCGGPVDVSFAKN-DPRIGAILWVGY 299 (517)
Q Consensus 221 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~~~~~pvVvVl~~g~Py~l~~~~~-~~~v~ail~a~~ 299 (517)
...+.+|++|+.+|...... +-+..-|+. |+..+||+|.|- |+.+...+. ..+...-+..|.
T Consensus 34 ~~I~~~~~vIvL~G~~t~~s------------~wv~~EI~~-A~~~gkpIigV~----~~g~~~~P~~l~~~a~~iV~Wn 96 (111)
T 1eiw_A 34 ATPEDADAVIVLAGLWGTRR------------DEILGAVDL-ARKSSKPIITVR----PYGLENVPPELEAVSSEVVGWN 96 (111)
T ss_dssp CCSSSCSEEEEEGGGTTTSH------------HHHHHHHHH-HTTTTCCEEEEC----CSSSSCCCTTHHHHCSEEECSC
T ss_pred CccccCCEEEEEeCCCcCCC------------hHHHHHHHH-HHHcCCCEEEEE----cCCCCcCCHHHHhhCceeccCC
Confidence 45678999999998654221 223333433 334689988773 444332220 111122344665
Q ss_pred CCchhHHHHHHHHccCCCC
Q 010126 300 PGQAGGAAIADVLFGRANP 318 (517)
Q Consensus 300 ~g~~~~~A~advL~G~~~P 318 (517)
.+.+.+.|-|..+|
T Consensus 97 -----~~~I~~aI~~~~~~ 110 (111)
T 1eiw_A 97 -----PHCIRDALEDALDV 110 (111)
T ss_dssp -----HHHHHHHHHHHHCC
T ss_pred -----HHHHHHHHHhccCC
Confidence 47788887776555
No 79
>1g0d_A Protein-glutamine gamma-glutamyltransferase; tissue transglutaminase,acyltransferase; 2.50A {Pagrus major} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4
Probab=27.64 E-value=95 Score=33.87 Aligned_cols=57 Identities=16% Similarity=0.078 Sum_probs=39.3
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCC--CCccccccc-cceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIG-FKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~--~~P~k~L~g-F~kv~l~pGes~~v~~~~~~ 475 (517)
.+.+++.|+|..+.. ..|+++++.-.-. +.+..++.- =..+.|+|+|++++.++|..
T Consensus 487 df~v~v~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~v~~~i~y 546 (695)
T 1g0d_A 487 DFDVIVEVKNEGGRD--AHAQLTMLAMAVTYNSLRRGECQRKTISVTVPAHKAHKEVMRLHY 546 (695)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTCBCCCCCCEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCcccCceeEeeEEEEECCCceEEEEEEECH
Confidence 589999999987765 5677776653221 333333311 12557999999999999987
No 80
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=27.43 E-value=1.8e+02 Score=27.23 Aligned_cols=51 Identities=10% Similarity=0.063 Sum_probs=33.8
Q ss_pred EEEEEEEecCCcCcceEEEEEeeCCCCC-CCccccccccce-eeecCCCeeEEEEEeC
Q 010126 419 GLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKK-VHVTAGALQSVRLDIH 474 (517)
Q Consensus 419 ~v~v~V~NtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~k-v~l~pGes~~v~~~~~ 474 (517)
.++++|+|+|+. .-.||.++.+.... ..| +.--== ..|+||+.++|.|...
T Consensus 39 ~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~p---fivtPPlfRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDY--PMLVQSEVLSEDQKSPAP---FVVTPPLFRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSS--CEEEEEEEECTTSSSBCS---EEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--cEEEEEEEEcCCCCccCC---EEEcCCeEEECCCCceEEEEEEC
Confidence 478999999976 47999999864322 111 000011 2489999999998654
No 81
>3o0l_A Uncharacterized protein; PFAM DUF1425 family member, structural genomics, joint cente structural genomics, JCSG, protein structure initiative; HET: MSE; 1.81A {Shewanella loihica}
Probab=27.28 E-value=2.5e+02 Score=22.84 Aligned_cols=57 Identities=9% Similarity=-0.089 Sum_probs=39.5
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCC-CCccccccccceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~v~~~~~~ 475 (517)
.+++++.|+|+.+.+=.=--.+|==+..+- ..|. ...|+++.|.++|+.+|+..-+-
T Consensus 39 ~l~~~~~l~N~~~~~~~l~Yrf~WyD~~Gl~v~~~--~~~W~~l~l~~~~~~~l~~vapn 96 (112)
T 3o0l_A 39 FLRARGTIISKSPKDQRLQYKFTWYDINGATVEDE--GVSWKSLKLHGKQQMQVTALSPN 96 (112)
T ss_dssp CEEEEEEEEECSSSCEEEEEEEEEECTTSCBCCCT--TCCCEEEEECTTCEEEEEEECSS
T ss_pred eEEEEEEEEeCCCCCEEEEEEEEEECCCCCCcCCC--CCCcEEEEECCCCeEEEEEECCC
Confidence 589999999988876443334444455543 2332 25788999999999988877554
No 82
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=27.00 E-value=1.5e+02 Score=26.68 Aligned_cols=39 Identities=15% Similarity=-0.072 Sum_probs=29.3
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHH
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 263 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~ 263 (517)
.++.+..+...+||.+|++.-.. ++.+|..-..+|+.+.
T Consensus 59 ~d~~~~~~~l~~AD~iV~~~P~y-----------~~s~pa~LK~~iDrv~ 97 (204)
T 2amj_A 59 YDVKAEVQNFLWADVVIWQMPGW-----------WMGAPWTVKKYIDDVF 97 (204)
T ss_dssp CCHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHhCCEEEEECCcc-----------ccCCCHHHHHHHHHHh
Confidence 45777888999999999976322 3567877778888765
No 83
>1ex0_A Coagulation factor XIII A chain; transglutaminase, blood coagulation, mutant, W279F, oxyanion, transferase; 2.00A {Homo sapiens} SCOP: b.1.18.9 b.1.5.1 b.1.5.1 d.3.1.4 PDB: 1evu_A 1fie_A 1f13_A 1ggt_A 1ggu_A 1ggy_A 1qrk_A
Probab=26.63 E-value=95 Score=34.08 Aligned_cols=57 Identities=11% Similarity=0.114 Sum_probs=40.3
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCC--CCccccccc-cceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIG-FKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~--~~P~k~L~g-F~kv~l~pGes~~v~~~~~~ 475 (517)
.+.+++.++|..+.. ..|+++++.-.-. +.+..+++- =..+.|+|+|++++.++|..
T Consensus 532 df~v~l~~~N~s~~~--~~v~~~l~a~~v~YtG~~~~~~~~~~~~~~L~p~~~~~i~~~i~y 591 (731)
T 1ex0_A 532 DFKLSITFRNNSHNR--YTITAYLSANITFYTGVPKAEFKKETFDVTLEPLSFKKEAVLIQA 591 (731)
T ss_dssp CEEEEEEEEECSSSC--EEEEEEEEEEEECTTSCEEEEEEEEEEEEEECTTEEEEEEEEECH
T ss_pred CEEEEEEEEECCCCC--EEEEEEEEEEEEeeCCccccceeEeeEEEEECCCceEEEEEEECH
Confidence 589999999988765 6778877653322 444444321 12457899999999999987
No 84
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=26.34 E-value=1.1e+02 Score=27.56 Aligned_cols=39 Identities=10% Similarity=0.085 Sum_probs=27.3
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHH
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 263 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~ 263 (517)
+...+..+..++||.+|++.-+. +..+|+.-..+|+-+.
T Consensus 56 ~~~~~l~~~i~~aD~~ii~tPeY-----------n~s~pg~LKn~iDwls 94 (190)
T 3u7r_A 56 ESVLRLKDRIEHSDAVLAITPEY-----------NRSYPGMIKNAIDWAT 94 (190)
T ss_dssp HHHHHHHHHHHTSSEEEEECCCB-----------TTBCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCcEEEechhh-----------cccCCHHHHHHHHHhc
Confidence 34556678899999999976432 3467777777777664
No 85
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=26.31 E-value=1.8e+02 Score=29.31 Aligned_cols=61 Identities=16% Similarity=0.227 Sum_probs=46.7
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCCCCccccccccceeeecCCCeeEEEEEeCCCCCceEEeCCCcEEecCeEEE
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHS 496 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~kv~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~~~G~y~ 496 (517)
.+++.++|+=+|+ -.|-++|-+.. +..+++++..|.-+..+.++|+|.. +++|.|.
T Consensus 312 ~~~l~f~~~~~~~----~~v~~~v~d~~------~~~~~~~~~~v~~~~~~~~tl~ls~--------------~~aGhh~ 367 (391)
T 2xwx_A 312 PIQLDLTLEAQGE----MSAELTVYNHH------QKPLASWSQAMTDGELKSITLELSE--------------AKAGHHM 367 (391)
T ss_dssp CCEEEEEEEEESS----EEEEEEEECTT------SCEEEEEEEEECTTCEEEEEEECSC--------------CCSEEEE
T ss_pred cEEEEEEEEecCc----eEEEEEEEcCC------CCccceeeEEEcCCCcceEEEEccC--------------CCCccEE
Confidence 4677777766665 45677777765 7788999999999998999999986 2678888
Q ss_pred EEEeC
Q 010126 497 LHIGD 501 (517)
Q Consensus 497 ~~vg~ 501 (517)
+.|-.
T Consensus 368 lvv~~ 372 (391)
T 2xwx_A 368 LVSRI 372 (391)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 76653
No 86
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=24.96 E-value=1e+02 Score=27.71 Aligned_cols=37 Identities=8% Similarity=0.121 Sum_probs=27.1
Q ss_pred HHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHH
Q 010126 216 IGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVA 263 (517)
Q Consensus 216 ~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~ 263 (517)
..+..+....||.+|++.-. + ++.+|..-..+|+.+.
T Consensus 78 ~~~~~~~l~~AD~iV~~~P~---y--------~~~~pa~lK~~iD~~~ 114 (212)
T 3r6w_A 78 SDQLVGELFDSDLLVISTPM---Y--------NFSVPSGLKAWIDQIV 114 (212)
T ss_dssp HHHHHHHHHHCSEEEEEEEC---B--------TTBCCHHHHHHHHHHC
T ss_pred HHHHHHHHHhCCEEEEEcCc---c--------cccCCHHHHHHHHHHh
Confidence 45567788999999997632 1 3567887788888874
No 87
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=24.89 E-value=1.1e+02 Score=28.30 Aligned_cols=55 Identities=20% Similarity=0.227 Sum_probs=36.0
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH---------------hCCCCEEEEEecCc
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK---------------ASRGPVVLVLMCGG 278 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~---------------~~~~pvVvVl~~g~ 278 (517)
.++.+..+....||.+|+..-.. ...+|..-..+++.+.. ..+|++++++.+|+
T Consensus 81 dd~~~~~~~l~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~~~~~g~~~~~~~~~~~~~l~gK~~~~~~T~g~ 149 (228)
T 3tem_A 81 SDITDEQKKVREADLVIFQFPLY-----------WFSVPAILKGWMDRVLCQGFAFDIPGFYDSGLLQGKLALLSVTTGG 149 (228)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHSCBTTTBCSSCCGGGCTTTTCEEEEEEECSS
T ss_pred HHHHHHHHHHHhCCEEEEECChh-----------hcccCHHHHHHHHHHhhcCcccccCCCCCCCCCCCCEEEEEEeCCC
Confidence 34556677889999999976321 24567777778877631 13566666666666
Q ss_pred e
Q 010126 279 P 279 (517)
Q Consensus 279 P 279 (517)
|
T Consensus 150 ~ 150 (228)
T 3tem_A 150 T 150 (228)
T ss_dssp C
T ss_pred C
Confidence 5
No 88
>3vmn_A Dextranase; TIM barrel, immunoglobrin fold, greek-KEY-motif, glycoside H family 66, hydrolase; 1.60A {Streptococcus mutans} PDB: 3vmo_A* 3vmp_A*
Probab=24.86 E-value=82 Score=34.00 Aligned_cols=56 Identities=14% Similarity=0.116 Sum_probs=36.5
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCCCCccccccccce-eeecCCCeeEE---EEEeCCCCCc
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGNWSPNKQLIGFKK-VHVTAGALQSV---RLDIHVCKHL 479 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~~~P~k~L~gF~k-v~l~pGes~~v---~~~~~~~~~~ 479 (517)
.++++|+++|+......-.|.+=+.... .++-.-+. +.|++|++.++ +++++. .+|
T Consensus 23 ~V~l~~~l~n~t~~~~~gtv~~~v~hl~------~~V~~~~~~~~l~~G~s~~~~~~~~~~P~-~df 82 (643)
T 3vmn_A 23 AVHLNLTLNNTTSLAQNITATAEVYSLE------NKLKTLQYTKYLLPNESYTTQKGEFVIPA-NSL 82 (643)
T ss_dssp CEEEECEEECCSSSCEEEEEEEEEEETT------EEEEEEEEEEEECTTCEEECCTTSEEECT-TSS
T ss_pred eEEEEEEEecccCccceeEEEEEEEecc------cccccceEEEEecCCCcceeeeeeeecCc-ccc
Confidence 7999999999777655444444333221 11111122 57899999877 788887 777
No 89
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=24.67 E-value=2.7e+02 Score=32.70 Aligned_cols=62 Identities=16% Similarity=0.129 Sum_probs=42.4
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCC--CCccccccccceeeecCCCeeEEEEEeCCCCCc
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN--WSPNKQLIGFKKVHVTAGALQSVRLDIHVCKHL 479 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~--~~P~k~L~gF~kv~l~pGes~~v~~~~~~~~~~ 479 (517)
.+.+.++|.|..+.+++-.|+|...++.-. ..+.+....=+++.|++|++++|.|+|.+ ..+
T Consensus 681 ~~~l~~~v~N~~~~~~~v~v~l~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~v~f~i~~-~~~ 744 (1325)
T 2pn5_A 681 AVVLQFTLFNNLGAEYIADVTLYNVANQTEFVGRPNTDLSYTKSVSVPPKVGVPISFLIKA-RKL 744 (1325)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEECGGGCEEETTSCTTCCEEEEEEEECTTCCEEEEEEEEE-CSS
T ss_pred EEEEEEEEEeCCCCcEEEEEEEeecCCceEEeccCCCCCcceEEEEECCCCeEEEEEEEEE-ccc
Confidence 799999999999888887788765432110 11111111124578999999999999988 543
No 90
>4fxk_B Complement C4-A alpha chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_B*
Probab=24.30 E-value=74 Score=35.09 Aligned_cols=55 Identities=20% Similarity=0.045 Sum_probs=41.2
Q ss_pred eEEEEEEEEecCCcCcceEEEEEeeCCCCC-CCccccccccceeeecCCCeeEEEEEeCC
Q 010126 417 SLGLHVDIKNTGDMAGTHTLLVFAKPPAGN-WSPNKQLIGFKKVHVTAGALQSVRLDIHV 475 (517)
Q Consensus 417 ~~~v~v~V~NtG~~~G~evvQlY~~~~~~~-~~P~k~L~gF~kv~l~pGes~~v~~~~~~ 475 (517)
.+.+.++|.|..+....-.|+|-..++... ..+.. -+++.|+||+++.|.|+|.+
T Consensus 169 ~~~i~~~V~N~~~~~~~v~v~l~~~~~~~~~~~~~~----~~~~~v~a~~~~~v~f~i~~ 224 (767)
T 4fxk_B 169 QLELRPVLYNYLDKNLTVSVHVSPVEGLCLAGGGGL----AQQVLVPAGSARPVAFSVVP 224 (767)
T ss_dssp EEEECCEEEECSSSCEEEEEEECCCTTEECSSSSCC----CEEEEECSSCEEECCEEEEE
T ss_pred EEEEEEEEEECCCCCEEEEEEEEecCCeEEecCCce----eEEEEEcCCCeEEEEEEEEE
Confidence 799999999999888887888866554322 11111 14678999999999999987
No 91
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=24.06 E-value=2.1e+02 Score=24.84 Aligned_cols=52 Identities=17% Similarity=0.141 Sum_probs=31.7
Q ss_pred EEEEEEEec-CCcCcceEEEEEeeCCCCC-C---CccccccccceeeecCCCe-eEEEEEeCC
Q 010126 419 GLHVDIKNT-GDMAGTHTLLVFAKPPAGN-W---SPNKQLIGFKKVHVTAGAL-QSVRLDIHV 475 (517)
Q Consensus 419 ~v~v~V~Nt-G~~~G~evvQlY~~~~~~~-~---~P~k~L~gF~kv~l~pGes-~~v~~~~~~ 475 (517)
++.|+|+-+ |...|.-.|.....+-.+. + .|. ...+..+|||+ |+++++|--
T Consensus 40 ~v~vtV~R~~G~~~~~v~V~y~T~dGTA~~g~Dy~~~-----~gtl~F~~Get~k~i~V~Iid 97 (160)
T 3gin_A 40 TVALTIIRRGGDLTNTVFVDFRTEDGTANAGSDYEFT-----EGTVVFKPGETQKEIRVGIID 97 (160)
T ss_dssp EEEEEEEEESSCTTSCEEEEEEEEESSSCBTTTBCCC-----EEEEEECTTCCEEEEEEEBCC
T ss_pred EEEEEEEEccCCCCcEEEEEEEEECCcccCCCCcccc-----ceEEEEcCCcEEEEEEEEEEC
Confidence 356777665 5556666777666655543 2 222 14556799998 667776654
No 92
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=23.95 E-value=65 Score=25.34 Aligned_cols=30 Identities=20% Similarity=0.329 Sum_probs=20.8
Q ss_pred cceeeecCCCeeEEEEEeCCCCCceEEeCCCcEEecCeEEEEEEe
Q 010126 456 FKKVHVTAGALQSVRLDIHVCKHLSVVDKFGIRRIPMGEHSLHIG 500 (517)
Q Consensus 456 F~kv~l~pGes~~v~~~~~~~~~~~~~d~~~~~~~~~G~y~~~vg 500 (517)
|..+.|.|||+.+++|+-+. .+|.|.++..
T Consensus 62 ~~~~~~~pG~~~~~~f~~~~---------------~~G~y~y~C~ 91 (106)
T 2gim_A 62 HKQLLMSPGQSTSTTFPADA---------------PAGEYTFYCE 91 (106)
T ss_dssp BCSCCCSTTCEEEEECCTTC---------------CSEEEEEECT
T ss_pred ccceeeCCCCEEEEEEecCC---------------CCceEEEEeC
Confidence 45667999999888765322 3677777755
No 93
>2xbt_A Cellulosomal scaffoldin; sugar binding protein; 1.83A {Bacteroides cellulosolvens}
Probab=23.72 E-value=30 Score=30.58 Aligned_cols=34 Identities=9% Similarity=0.010 Sum_probs=27.0
Q ss_pred cccceeeec------CCCe-eEEEEEeCCCCCceEEeCCCcE
Q 010126 454 IGFKKVHVT------AGAL-QSVRLDIHVCKHLSVVDKFGIR 488 (517)
Q Consensus 454 ~gF~kv~l~------pGes-~~v~~~~~~~~~~~~~d~~~~~ 488 (517)
++|....|. ||++ .+|.|+|.. .+++.||...+|
T Consensus 91 I~F~~g~l~~~~~~~pg~~~~eiq~ri~~-~dws~~dqsNDy 131 (160)
T 2xbt_A 91 IKLASGTLGAAGAQWPSQSEVTIQGRVAK-ADWTNVDQSNDY 131 (160)
T ss_dssp EEECSCEECCTTCCTTCCSEEEEEEEEEE-SSSCCEEGGGCT
T ss_pred EEeCCcEEccccccCCCCccEEEEEEEec-CCCCccccCCCc
Confidence 467666788 9955 499999998 899999987655
No 94
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=22.48 E-value=27 Score=34.83 Aligned_cols=56 Identities=18% Similarity=0.268 Sum_probs=30.9
Q ss_pred HHhhcCCEEEEEecCCCccccccCCCCCCCCChhH----HHHHHHHHHhCCCCEEEEEecCceeec
Q 010126 221 VAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQ----QELVSRVAKASRGPVVLVLMCGGPVDV 282 (517)
Q Consensus 221 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q----~~li~~l~~~~~~pvVvVl~~g~Py~l 282 (517)
++.+++|+||++.|.+. .+|.+|.+|- ..- .++.+++.+...+.+++++ .+||.+.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DLl--~~Na~I~~~~~~~i~~~a~~~~~vlv-vsNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDLL--EMNARIFKEQGEAIAAVAASDCRVVV-VGNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHHH--HHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHH--HHhHHHHHHHHHHHHhhccCceEEEE-eCCCcch
Confidence 56789999999888653 3344454321 111 2344455543333344443 4799875
No 95
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=21.09 E-value=2.2e+02 Score=26.09 Aligned_cols=40 Identities=15% Similarity=-0.075 Sum_probs=29.0
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHHHH
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRVAK 264 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l~~ 264 (517)
.++.+..+....||.+|+..-.. .+.+|..-..+++.+..
T Consensus 72 ~Dv~~~~~~l~~aD~iv~~~P~y-----------~~~~p~~lK~~iD~v~~ 111 (218)
T 3rpe_A 72 YDIESEIENYLWADTIIYQMPAW-----------WMGEPWILKKYIDEVFT 111 (218)
T ss_dssp CCHHHHHHHHHHCSEEEEEEECB-----------TTBCCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCEEEEECChH-----------hccCCHHHHHHHHHHHh
Confidence 45677788999999999976322 34667777778888754
No 96
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=20.88 E-value=46 Score=32.87 Aligned_cols=57 Identities=21% Similarity=0.283 Sum_probs=28.3
Q ss_pred HHhhcCCEEEEEecCCCccccccCCCCCCCC-C-hhHHHHHHHHHHhCCCCEEEEEecCceeec
Q 010126 221 VAARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 282 (517)
Q Consensus 221 ~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l-~-~~q~~li~~l~~~~~~pvVvVl~~g~Py~l 282 (517)
+..++||+||++.|.+. .+|.+|.++-- . +--.++++++.+.++ ..++++. +||.++
T Consensus 72 ~a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~~p-~a~ilvv-tNPvdi 130 (326)
T 3vku_A 72 SDAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDSGF-NGIFLVA-ANPVDI 130 (326)
T ss_dssp GGGTTCSEEEECCCCC-------------------CHHHHHHHHHTTTC-CSEEEEC-SSSHHH
T ss_pred HHhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEc-cCchHH
Confidence 45789999999988643 34455654321 1 123456666665433 4444444 799886
No 97
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=20.39 E-value=97 Score=29.06 Aligned_cols=38 Identities=8% Similarity=0.005 Sum_probs=26.7
Q ss_pred ccHHHHHHHhhcCCEEEEEecCCCccccccCCCCCCCCChhHHHHHHHH
Q 010126 214 QLIGAAEVAARQADATVLVMGLDQSIEAEFIDRAGLLLPGRQQELVSRV 262 (517)
Q Consensus 214 ~~~~~a~~~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l~~~q~~li~~l 262 (517)
..+.+..+.+.+||.+|++.-.. +..+|+.-..+|+.+
T Consensus 87 d~~~~l~~~i~~AD~iI~~sP~Y-----------n~sipa~LKn~iD~l 124 (247)
T 2q62_A 87 PKVQELRELSIWSEGQVWVSPER-----------HGAMTGIMKAQIDWI 124 (247)
T ss_dssp HHHHHHHHHHHHCSEEEEEEECS-----------SSSCCHHHHHHHHTS
T ss_pred HHHHHHHHHHHHCCEEEEEeCCC-----------CCCccHHHHHHHHHh
Confidence 34677788999999999976432 345677666777665
No 98
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=20.02 E-value=24 Score=34.42 Aligned_cols=56 Identities=16% Similarity=0.334 Sum_probs=31.5
Q ss_pred HhhcCCEEEEEecCCCccccccCCCCCCCC-C-hhHHHHHHHHHHhCCCCEEEEEecCceeec
Q 010126 222 AARQADATVLVMGLDQSIEAEFIDRAGLLL-P-GRQQELVSRVAKASRGPVVLVLMCGGPVDV 282 (517)
Q Consensus 222 ~a~~aD~vIv~~g~~~~~~~Eg~Dr~~l~l-~-~~q~~li~~l~~~~~~pvVvVl~~g~Py~l 282 (517)
..++||+||++.|.+. ..|.+|.++-- . .--.++++++++.++ +.++++. .||.+.
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~~p-~aivlvv-sNPvd~ 123 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVENAP-ESKILVV-TNPMDV 123 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTTST-TCEEEEC-SSSHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHHHHHHHHHHHHHHHHHhcCC-ceEEEEe-cCcchh
Confidence 4679999999998654 33444543210 0 011345566665443 3444433 799986
Done!