Query 010129
Match_columns 517
No_of_seqs 317 out of 1665
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 20:32:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010129.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010129hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 1.9E-57 6.6E-62 473.3 27.8 326 99-449 16-398 (413)
2 1j71_A Candidapepsin, aspartic 100.0 2.1E-55 7.1E-60 446.9 28.4 309 96-461 5-333 (334)
3 2qzx_A Candidapepsin-5; aspart 100.0 2.2E-55 7.5E-60 448.3 27.7 314 96-462 5-341 (342)
4 3psg_A Pepsinogen; hydrolase(a 100.0 4.4E-55 1.5E-59 449.9 29.5 302 96-450 48-370 (370)
5 3fv3_A SAPP1P-secreted asparti 100.0 6.3E-55 2.1E-59 444.5 30.3 307 96-461 5-338 (339)
6 1mpp_A Pepsin; hydrolase(acid 100.0 1.5E-54 5E-59 445.5 30.4 309 96-454 10-359 (361)
7 3pvk_A Candidapepsin-2; hydrol 100.0 1.3E-54 4.6E-59 442.6 28.9 319 96-462 5-341 (342)
8 2x0b_A Renin; hydrolase-hormon 100.0 4.3E-55 1.5E-59 451.0 25.2 302 95-450 52-383 (383)
9 1tzs_A Cathepsin E; hydrolase, 100.0 1.7E-54 5.8E-59 443.1 29.2 306 96-453 15-345 (351)
10 2apr_A Rhizopuspepsin; hydrola 100.0 3.3E-54 1.1E-58 436.4 30.0 298 99-450 11-324 (325)
11 3cms_A Chymosin B; hydrolase, 100.0 1.1E-54 3.9E-59 439.5 25.0 300 96-450 6-323 (323)
12 1dpj_A Proteinase A; proteinas 100.0 1.3E-53 4.5E-58 432.8 29.6 301 95-450 4-329 (329)
13 1am5_A Pepsin, acid proteinase 100.0 5.1E-54 1.7E-58 435.0 26.4 299 96-450 4-324 (324)
14 1htr_B Gastricsin; aspartyl pr 100.0 7.7E-54 2.6E-58 434.6 26.8 297 99-450 8-329 (329)
15 4aa9_A Chymosin; hydrolase, as 100.0 2.6E-54 8.9E-59 436.4 23.1 299 99-450 7-320 (320)
16 3k1w_A Renin; protease, altern 100.0 4.9E-54 1.7E-58 438.3 24.5 309 92-450 6-340 (341)
17 3aup_A SBG7S, BG, basic 7S glo 100.0 2.3E-53 8E-58 442.6 29.0 327 99-455 17-398 (403)
18 3c9x_A Trichoderma reesei aspa 100.0 1.7E-53 5.9E-58 431.8 25.8 301 99-449 11-329 (329)
19 1oew_A Endothiapepsin; hydrola 100.0 2.9E-53 9.8E-58 430.2 25.1 299 100-449 12-329 (329)
20 2ewy_A Beta-secretase 2; BACE2 100.0 6.8E-53 2.3E-57 436.5 25.4 323 100-462 10-367 (383)
21 2bju_A Plasmepsin II; aspartic 100.0 2.9E-53 1E-57 444.5 22.7 302 95-450 129-450 (453)
22 2qp8_A Beta-secretase 1; BACE1 100.0 2.6E-52 9E-57 433.7 29.4 322 101-462 19-379 (395)
23 1qdm_A Prophytepsin; aspartic 100.0 2E-52 6.8E-57 442.5 28.5 315 94-449 42-477 (478)
24 1miq_A Plasmepsin; aspartic pr 100.0 9.5E-53 3.3E-57 433.2 25.3 301 95-450 53-374 (375)
25 3lpj_A Beta-secretase 1; alzhe 100.0 1E-51 3.5E-56 436.6 29.7 324 101-462 72-432 (455)
26 3vf3_A Beta-secretase 1; struc 100.0 1.8E-51 6.3E-56 428.4 30.8 323 102-462 27-386 (402)
27 1t6e_X Xylanase inhibitor; two 100.0 3.3E-51 1.1E-55 423.2 29.7 317 99-451 10-374 (381)
28 3qvc_A Histo-aspartic protease 100.0 6.9E-52 2.3E-56 434.6 24.8 301 93-450 126-449 (451)
29 1ibq_A Aspergillopepsin; aspar 100.0 3.3E-51 1.1E-55 414.4 26.2 298 100-450 11-325 (325)
30 1yg9_A Aspartic protease BLA G 100.0 1.8E-51 6.1E-56 417.2 23.7 297 99-450 13-329 (330)
31 1bxo_A Protein (penicillopepsi 100.0 2.2E-51 7.6E-56 415.3 21.5 296 100-450 12-323 (323)
32 1izd_A Aspartic proteinase; su 100.0 1.1E-50 3.8E-55 410.1 24.6 296 100-450 12-323 (323)
33 1wkr_A Polyporopepsin; hydrola 100.0 3.1E-50 1E-54 410.0 27.5 295 96-455 5-338 (340)
34 1b5f_A Protein (cardosin A); h 100.0 8E-42 2.7E-46 330.3 18.6 221 93-350 2-238 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 1.4E-35 4.7E-40 287.2 22.4 218 218-450 2-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 4.5E-22 1.5E-26 163.4 9.0 87 95-212 4-96 (97)
37 1b5f_B Protein (cardosin A); h 99.5 4.5E-14 1.6E-18 113.4 7.4 70 378-450 11-87 (87)
38 2i1a_A DNA damage-inducible pr 92.3 0.54 1.9E-05 40.4 8.7 26 422-447 109-134 (148)
39 3s8i_A Protein DDI1 homolog 1; 90.8 0.31 1.1E-05 42.1 5.5 28 422-449 108-135 (148)
40 2i1a_A DNA damage-inducible pr 90.3 0.41 1.4E-05 41.1 5.8 30 103-134 25-54 (148)
41 1fmb_A EIAV protease; hydrolas 84.7 0.97 3.3E-05 36.4 4.3 27 105-133 9-35 (104)
42 2hs1_A HIV-1 protease; ultra-h 84.4 1 3.6E-05 35.9 4.3 27 106-134 10-36 (99)
43 3ec0_A Protease; HIV-2, inhibi 80.4 1.7 5.8E-05 34.6 4.1 27 106-134 10-36 (99)
44 3liy_A Protease; hydrolase, hy 76.1 2.7 9.3E-05 34.2 4.1 28 107-134 13-43 (116)
45 2hah_A Protease, retropepsin; 75.5 2.7 9.2E-05 34.5 4.1 26 106-134 16-41 (116)
46 3sqf_A Protease; folded monome 69.1 5.2 0.00018 32.6 4.3 27 106-134 11-37 (114)
47 3s8i_A Protein DDI1 homolog 1; 65.8 5.2 0.00018 34.3 4.0 29 104-134 24-52 (148)
48 3slz_A GAG-Pro-POL polyprotein 54.6 12 0.00041 31.3 4.1 28 105-134 23-50 (132)
49 2rsp_A RSV protease; hydrolase 53.4 11 0.00039 31.1 3.7 22 111-134 27-48 (124)
50 3ka2_A [L-Ala51;Gly51']HIV-1 p 51.3 13 0.00045 33.5 4.1 26 106-133 10-35 (203)
51 1ibq_A Aspergillopepsin; aspar 33.6 30 0.001 33.4 3.9 41 293-340 4-44 (325)
52 3ka2_A [L-Ala51;Gly51']HIV-1 p 32.2 40 0.0014 30.3 4.1 26 106-133 114-139 (203)
53 1bxo_A Protein (penicillopepsi 29.2 33 0.0011 33.1 3.3 41 293-340 5-45 (323)
54 1izd_A Aspartic proteinase; su 26.3 39 0.0013 32.5 3.3 32 302-340 14-45 (323)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.9e-57 Score=473.29 Aligned_cols=326 Identities=21% Similarity=0.358 Sum_probs=262.9
Q ss_pred ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCC-
Q 010129 99 NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQK- 177 (517)
Q Consensus 99 ~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~- 177 (517)
+..+.+|+++|.||||||+|.|++||||+++||+|. .| .+|+||+.++|+++.|...+
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~--~c-------------------~~Sst~~~v~C~s~~C~~~~~ 74 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD--QN-------------------YVSSTYRPVRCRTSQCSLSGS 74 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SS-------------------CCCTTCEECBTTSHHHHHTTC
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC--CC-------------------CCCCCcCccCCCccccccccc
Confidence 455678999999999999999999999999999997 33 27999999999999998642
Q ss_pred -CC---CC------CCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCc---cceecceeeeeeeeeccCCCCCCCCCce
Q 010129 178 -QC---PS------AGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQ---SKSVDSRISFGCGRVQTGSFLDGAAPNG 244 (517)
Q Consensus 178 -~C---~~------~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~---~~~~~~~~~fG~~~~~~g~~~~~~~~dG 244 (517)
.| .+ .++.|.|.+.|+.|++.+.|++++|+|+|+..++. ..+.++++.|||++.+.+... ....||
T Consensus 75 ~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~-~~~~dG 153 (413)
T 3vla_A 75 IACGDCFNGPRPGCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL-ASGVVG 153 (413)
T ss_dssp CEEECCSSCCBTTBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS-CTTCCE
T ss_pred CCCcccccCCCCCCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc-cccccc
Confidence 23 21 13569999999557899999999999999854322 136788999999998632211 135689
Q ss_pred eEeeCCCCCChhHHHhhcCCCCceeEEeeCC--CCCeeEEeCCCCCC---------C-CceecceeCCCC----------
Q 010129 245 LFGLGMDKTSVPSILANQGLIPNSFSMCFGS--DGTGRISFGDKGSP---------G-QGETPFSLRQTH---------- 302 (517)
Q Consensus 245 ilGLg~~~~S~~~ql~~~g~i~~~FS~~l~~--~~~G~L~fGg~d~~---------~-~~~tp~~~~~~~---------- 302 (517)
|||||++.+|+++||+++++++++|||||.+ +..|.|+||+.|.. . +.+||++..+..
T Consensus 154 IlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~ 233 (413)
T 3vla_A 154 MAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEP 233 (413)
T ss_dssp EEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCC
T ss_pred ccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCC
Confidence 9999999999999999998889999999998 45799999998752 3 788898876432
Q ss_pred -CeEEEEEeEEEeCCeeeecc-----------CcEEEeccccceeecHHHHHHHHHHHHHhhhccccc-CCCCCCccccc
Q 010129 303 -PTYNITITQVSVGGNAVNFE-----------FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRET-STSDLPFEYCY 369 (517)
Q Consensus 303 -~~y~v~l~~i~vg~~~~~~~-----------~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~C~ 369 (517)
.+|.|+|++|+||++.+.++ .++||||||++++||+++|++|.++|.+++...... .....+++.||
T Consensus 234 ~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~~~~~~~~C~ 313 (413)
T 3vla_A 234 SVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVASVAPFGACF 313 (413)
T ss_dssp CCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEECCCTTCSCEE
T ss_pred CceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCCCCCCCccee
Confidence 58999999999999998764 479999999999999999999999999987521111 11133578899
Q ss_pred ccCCCC---CCCCCCeEEEEEcC-CccEEEcCCeeEEEeCCCCeeEEEEEEEeCC----CceeechhhhceeEEEEeCCC
Q 010129 370 VLSPNQ---TNFEYPVVNLTMKG-GGPFFVNDPIVIVSSEPKGLYLYCLGVVKSD----NVNIIGQNFMTGYNIVFDREK 441 (517)
Q Consensus 370 ~~~~~~---~~~~~P~i~~~f~g-g~~~~l~~~~~~~~~~~~~~~~~Cl~~~~~~----~~~IlG~~fl~~~yvvfD~~~ 441 (517)
+.++.. ....+|+|+|+|+| ++.|+|++++|++...+ + .+|++++... +.||||+.|||++|+|||+++
T Consensus 314 ~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~-~--~~Cl~~~~~~~~~~~~~IlGd~fl~~~~vvfD~~~ 390 (413)
T 3vla_A 314 STDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND-N--VVCLGVVDGGSNLRTSIVIGGHQLEDNLVQFDLAT 390 (413)
T ss_dssp ECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET-T--EEEECEEEEESSCSSSEEECHHHHTTEEEEEETTT
T ss_pred ccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC-C--cEEEEEEecCCCcccceeEehhhhcCeEEEEECCC
Confidence 986421 12479999999954 38999998888776443 3 6799887653 489999999999999999999
Q ss_pred CEEEEEec
Q 010129 442 NVLGWKAS 449 (517)
Q Consensus 442 ~~iGfa~~ 449 (517)
+|||||++
T Consensus 391 ~riGfa~~ 398 (413)
T 3vla_A 391 SRVGFSGT 398 (413)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEe
Confidence 99999984
No 2
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.1e-55 Score=446.95 Aligned_cols=309 Identities=20% Similarity=0.328 Sum_probs=253.6
Q ss_pred eecccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC---CCCCC----CCCCCCCCCcccCCCCCCCCCCCcccccC
Q 010129 96 YRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD---CVSCV----HGLNSSSGQVIDFNIYSPNTSSTSSKVPC 168 (517)
Q Consensus 96 ~~~~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~---C~~C~----~~~~~~~~~~~~~~~ydp~~SsT~~~~~C 168 (517)
+++...+..|+++|.||||+|+|.|++||||+++||+|. |..|. ...| ..++.|||++|+|++..
T Consensus 5 ~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C------~~~~~y~~~~SsT~~~~-- 76 (334)
T 1j71_A 5 TTLINEGPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFC------KQEGTFDPSSSSSAQNL-- 76 (334)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG------GSSCCBCGGGCTTCEEE--
T ss_pred EEEecCCcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccc------cCCCcCCcccCCCcccC--
Confidence 344345678999999999999999999999999999975 54332 1122 34588999999999986
Q ss_pred CCcccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEee
Q 010129 169 NSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGL 248 (517)
Q Consensus 169 ~~~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGL 248 (517)
+|.|.+.| +||+.+.|.+++|+|+|+ +..++++.|||++... ..+|||||
T Consensus 77 ----------------~~~~~i~Y-g~Gs~~~G~~~~D~v~~g------~~~~~~~~fg~~~~~~-------~~~GilGL 126 (334)
T 1j71_A 77 ----------------NQDFSIEY-GDLTSSQGSFYKDTVGFG------GISIKNQQFADVTTTS-------VDQGIMGI 126 (334)
T ss_dssp ----------------EEEEEEEB-TTSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEES-------SSSCEEEC
T ss_pred ----------------CCceEEEE-CCCCEEEEEEEEEEEEEC------CEEEccEEEEEEEecC-------CCccEEEE
Confidence 78999999 788889999999999998 3578999999999763 34799999
Q ss_pred CCCCC--------ChhHHHhhcCCC-CceeEEeeCC--CCCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCC
Q 010129 249 GMDKT--------SVPSILANQGLI-PNSFSMCFGS--DGTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGG 316 (517)
Q Consensus 249 g~~~~--------S~~~ql~~~g~i-~~~FS~~l~~--~~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~ 316 (517)
|+... +++.+|+++|+| +++||+||.+ ...|.|+|||+|++ +.+.+.|++.....+|.|.|++|+|++
T Consensus 127 g~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g 206 (334)
T 1j71_A 127 GFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDG 206 (334)
T ss_dssp SCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETT
T ss_pred cCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECC
Confidence 99764 788999999999 8999999987 45799999999987 455555666555678999999999999
Q ss_pred eeeeccCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCc-ccccccCCCCCCCCCCeEEEEEcCCccEEE
Q 010129 317 NAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPF-EYCYVLSPNQTNFEYPVVNLTMKGGGPFFV 395 (517)
Q Consensus 317 ~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l 395 (517)
+.+..+..+||||||++++||+++|++|.+++.+.... ....+. ..|+ .+|.|+|+|.+|.+++|
T Consensus 207 ~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~~-----~~~~~~~~~C~---------~~p~i~f~f~~g~~~~i 272 (334)
T 1j71_A 207 TSVSTNADVVLDSGTTITYFSQSTADKFARIVGATWDS-----RNEIYRLPSCD---------LSGDAVFNFDQGVKITV 272 (334)
T ss_dssp EEEEEEEEEEECTTCSSEEECHHHHHHHHHHHTCEEET-----TTTEEECSSSC---------CCSEEEEEESTTCEEEE
T ss_pred EeccCCccEEEeCCCCcEecCHHHHHHHHHHcCCcccC-----CCceEEEEcCC---------CCCceEEEEcCCcEEEE
Confidence 99988889999999999999999999999999876421 111122 3443 37999999977899999
Q ss_pred cCCeeEEEeCCCCeeEEEEEEEeCCCceeechhhhceeEEEEeCCCCEEEEEecCCCCCCCCccCC
Q 010129 396 NDPIVIVSSEPKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALP 461 (517)
Q Consensus 396 ~~~~~~~~~~~~~~~~~Cl~~~~~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~~~~~~ 461 (517)
|+++|++...++ ..|+..+...+.||||+.|||++|+|||++++|||||+++|++ ++++++
T Consensus 273 ~~~~y~~~~~~~---~~C~~~i~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~--~~~i~~ 333 (334)
T 1j71_A 273 PLSELILKDSDS---SICYFGISRNDANILGDNFLRRAYIVYDLDDKTISLAQVKYTS--SSDISA 333 (334)
T ss_dssp EGGGGEEECSSS---SCEEESEEECTTCEECHHHHTTEEEEEETTTTEEEEEEECCCS--CCCEEE
T ss_pred CHHHheeecCCC---CeeEEEEeECCCcEEChHhhccEEEEEECCCCEEEEEecCCCC--ccceEE
Confidence 999888875433 2498766666689999999999999999999999999999974 444443
No 3
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=2.2e-55 Score=448.28 Aligned_cols=314 Identities=21% Similarity=0.348 Sum_probs=254.3
Q ss_pred eecccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC---CCCCCC----CCCCCCCCcccCCCCCCCCCCCcccccC
Q 010129 96 YRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD---CVSCVH----GLNSSSGQVIDFNIYSPNTSSTSSKVPC 168 (517)
Q Consensus 96 ~~~~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~---C~~C~~----~~~~~~~~~~~~~~ydp~~SsT~~~~~C 168 (517)
+++...+..|+++|.||||+|+|.|++||||+++||+|. |..|.. ..| ..++.|||++|+|++..
T Consensus 5 ~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C------~~~~~y~~~~SsT~~~~-- 76 (342)
T 2qzx_A 5 VTLHNEAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFC------KSAGSYSPASSRTSQNL-- 76 (342)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGG------GTTCCBCGGGCTTCEEE--
T ss_pred EEEecCCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccc------cCCCcCCcccCCCcccC--
Confidence 344345678999999999999999999999999999965 544421 122 24588999999999986
Q ss_pred CCcccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEee
Q 010129 169 NSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGL 248 (517)
Q Consensus 169 ~~~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGL 248 (517)
.|.|.+.| +||+.+.|.+++|+|+|+ ...++++.|||++... ..+|||||
T Consensus 77 ----------------~~~~~i~Y-g~Gs~~~G~~~~D~v~~g------~~~v~~~~fg~~~~~~-------~~~GilGL 126 (342)
T 2qzx_A 77 ----------------NTRFDIKY-GDGSYAKGKLYKDTVGIG------GVSVRDQLFANVWSTS-------ARKGILGI 126 (342)
T ss_dssp ----------------EEEEEEEC-TTSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEEC-------SSSCEEEC
T ss_pred ----------------CCcEEEEe-CCCCeEEEEEEEEEEEEC------CEEecceEEEEEEecC-------CCcCEEEE
Confidence 78999999 788889999999999998 3578999999999763 34799999
Q ss_pred CCCCC--------ChhHHHhhcCCC-CceeEEeeCC--CCCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCC
Q 010129 249 GMDKT--------SVPSILANQGLI-PNSFSMCFGS--DGTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGG 316 (517)
Q Consensus 249 g~~~~--------S~~~ql~~~g~i-~~~FS~~l~~--~~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~ 316 (517)
|+... +++.+|+++|+| +++||+||.+ ...|.|+|||+|++ +.+.+.+++.....+|.|.|++|+|++
T Consensus 127 g~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g 206 (342)
T 2qzx_A 127 GFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRG 206 (342)
T ss_dssp SCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETT
T ss_pred ccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECC
Confidence 99764 788999999999 8999999987 45799999999987 445555555555568999999999999
Q ss_pred eeeeccCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEc
Q 010129 317 NAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVN 396 (517)
Q Consensus 317 ~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~ 396 (517)
+.+..+..+||||||++++||+++|++|.+++.+....... . ...|.++|. .+|+|+|+|.+|.+++||
T Consensus 207 ~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~--~-----~~~~~~~C~----~~p~i~f~f~~g~~~~i~ 275 (342)
T 2qzx_A 207 RNVDANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSA--G-----NKVYVADCK----TSGTIDFQFGNNLKISVP 275 (342)
T ss_dssp EEEEEEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTT--S-----CEEEEECTT----CCCEEEEEETTTEEEEEE
T ss_pred EecCCCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccC--C-----CcEEEEECC----CCCcEEEEECCCcEEEEc
Confidence 99988889999999999999999999999999766432110 0 113344442 379999999778999999
Q ss_pred CCeeEEEeC----CCCeeEEEEEEEeCCCceeechhhhceeEEEEeCCCCEEEEEecCCCCCCCCccCCC
Q 010129 397 DPIVIVSSE----PKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPI 462 (517)
Q Consensus 397 ~~~~~~~~~----~~~~~~~Cl~~~~~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~~~~~~~ 462 (517)
+++|++... ++. ..|++.+...+.||||+.|||++|+|||++++|||||+++|++ +++++++
T Consensus 276 ~~~~~~~~~~~~~~~~--~~C~~~i~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~--~~~i~~i 341 (342)
T 2qzx_A 276 VSEFLFQTYYTSGKPF--PKCEVRIRESEDNILGDNFLRSAYVVYNLDDKKISMAPVKYTS--ESDIVAI 341 (342)
T ss_dssp GGGGEECCBCTTSCBC--SSEEESEEECSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS--CCCEEEC
T ss_pred HHHhcccccccCCCCC--CccEEEEecCCCcEeChHhhhcEEEEEECCCCEEEEEeeCCCC--CCCeEEc
Confidence 998887632 112 4698766666689999999999999999999999999999964 4555543
No 4
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=4.4e-55 Score=449.85 Aligned_cols=302 Identities=25% Similarity=0.397 Sum_probs=248.1
Q ss_pred eec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCccc
Q 010129 96 YRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLC 173 (517)
Q Consensus 96 ~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C 173 (517)
.++ |+.+..|+++|.||||||+|.|++||||+++||+|. |..| .| ..++.|||++|+||+..
T Consensus 48 ~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~~C~~~---~C------~~~~~y~~~~SsT~~~~------- 111 (370)
T 3psg_A 48 EPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSVYCSSL---AC------SDHNQFNPDDSSTFEAT------- 111 (370)
T ss_dssp CTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSG---GG------TTSCCBCGGGCTTCEEE-------
T ss_pred ecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECCCCCCc---cc------CCCCCCCCccCcCcEEC-------
Confidence 455 788999999999999999999999999999999998 6433 23 23489999999999996
Q ss_pred CCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCC
Q 010129 174 ELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKT 253 (517)
Q Consensus 174 ~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~ 253 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ ++.++++.|||++...+.++.....|||||||++.+
T Consensus 112 -----------~~~~~i~Y-g~Gs-~~G~~~~Dtv~ig------~~~v~~~~Fg~a~~~~~~~~~~~~~dGIlGLg~~~~ 172 (370)
T 3psg_A 112 -----------SQELSITY-GTGS-MTGILGYDTVQVG------GISDTNQIFGLSETEPGSFLYYAPFDGILGLAYPSI 172 (370)
T ss_dssp -----------EEEEEEES-SSCE-EEEEEEEEEEEET------TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGG
T ss_pred -----------CcEEEEEe-CCce-EEEEEEEEEEeeC------CcccCCeEEEEEEeecccccccCCccceeccCCccc
Confidence 78999999 5665 8999999999998 467899999999998776555566799999999875
Q ss_pred ------ChhHHHhhcCCC-CceeEEeeCCC--CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeeec--
Q 010129 254 ------SVPSILANQGLI-PNSFSMCFGSD--GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVNF-- 321 (517)
Q Consensus 254 ------S~~~ql~~~g~i-~~~FS~~l~~~--~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~-- 321 (517)
++..+|+++|+| +++||+||.++ ..|.|+|||+|++ +.+.+.|++.....+|.|.+++|+|+++.+..
T Consensus 173 s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~l~~i~v~g~~~~~~~ 252 (370)
T 3psg_A 173 SASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQITLDSITMDGETIACSG 252 (370)
T ss_dssp CGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEETTEEEEECEEESSSSEEECTT
T ss_pred cccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeecccccceeEEEEeEEEECCEEEecCC
Confidence 466789999999 89999999983 5799999999987 55666666666667899999999999988764
Q ss_pred cCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeE
Q 010129 322 EFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVI 401 (517)
Q Consensus 322 ~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~ 401 (517)
...+||||||+++++|++++++|.+++++... ....+...|... ..+|+|+|+| +|.+++||+++|+
T Consensus 253 ~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~------~~g~~~v~C~~~------~~lP~i~f~~-~g~~~~l~~~~yi 319 (370)
T 3psg_A 253 GCQAIVDTGTSLLTGPTSAIANIQSDIGASEN------SDGEMVISCSSI------DSLPDIVFTI-DGVQYPLSPSAYI 319 (370)
T ss_dssp CEEEEECTTCCSEEEEHHHHHHHHHHTTCEEC------TTCCEECCGGGG------GGCCCEEEEE-TTEEEEECHHHHE
T ss_pred CceEEEcCCCCcEECCHHHHHHHHHHhCCccc------CCCcEEEECCCc------ccCCcEEEEE-CCEEEEECHHHhc
Confidence 46799999999999999999999999865421 112233345443 5789999999 8999999998888
Q ss_pred EEeCCCCeeEEEEEE-EeC------CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 402 VSSEPKGLYLYCLGV-VKS------DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 402 ~~~~~~~~~~~Cl~~-~~~------~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+. .+ ..|+.. ... .+.||||+.|||++|+|||++++|||||+++
T Consensus 320 ~~-~~----~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~a~ 370 (370)
T 3psg_A 320 LQ-DD----DSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAPVA 370 (370)
T ss_dssp EE-CS----SCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cc-CC----CEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEEcC
Confidence 76 22 249754 331 2269999999999999999999999999974
No 5
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=6.3e-55 Score=444.48 Aligned_cols=307 Identities=23% Similarity=0.358 Sum_probs=252.8
Q ss_pred eecccCCceEEEEEEecCCCeEEEEEEeCCCCceeEec-----C-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCC
Q 010129 96 YRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPC-----D-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCN 169 (517)
Q Consensus 96 ~~~~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~-----~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~ 169 (517)
+++...+..|+++|.||||+|++.|++||||+++||++ . |..|.. ++.|||++|+||+.+
T Consensus 5 ~~l~~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~-----------~~~y~~~~SsT~~~~--- 70 (339)
T 3fv3_A 5 LSLINEGPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKS-----------SGTFTPSSSSSYKNL--- 70 (339)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTT-----------TCCBCGGGCTTCEEE---
T ss_pred eEEEcCCCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCC-----------CCcCCCccCcceeeC---
Confidence 45545567899999999999999999999999999984 4 344542 388999999999997
Q ss_pred CcccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeC
Q 010129 170 STLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLG 249 (517)
Q Consensus 170 ~~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg 249 (517)
.|.|.+.| ++|+.+.|.+++|+|+|+ ...++++.|||++...+ .+||||||
T Consensus 71 ---------------~~~~~i~Y-g~gs~~~G~~~~D~v~~g------~~~v~~~~fg~~~~~~~-------~~GilGLg 121 (339)
T 3fv3_A 71 ---------------GAAFTIRY-GDGSTSQGTWGKDTVTIN------GVSITGQQIADVTQTSV-------DQGILGIG 121 (339)
T ss_dssp ---------------EEEEEEEC-TTSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEESS-------SSCEEECS
T ss_pred ---------------CceEEEEE-CCCceEEEEEEEEEEEEC------CEEECceEEEEEEecCC-------CceeEEec
Confidence 78999999 788899999999999998 46789999999998764 37999999
Q ss_pred CCCCC----------------hhHHHhhcCCC-CceeEEeeCCC--CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEE
Q 010129 250 MDKTS----------------VPSILANQGLI-PNSFSMCFGSD--GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITI 309 (517)
Q Consensus 250 ~~~~S----------------~~~ql~~~g~i-~~~FS~~l~~~--~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l 309 (517)
+...+ ++.+|+++|+| +++||+||.+. ..|.|+|||+|++ +.+.+.+++.....+|.|.+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l 201 (339)
T 3fv3_A 122 YTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISL 201 (339)
T ss_dssp CGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEE
T ss_pred CccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccCccEEEEE
Confidence 97643 78899999999 89999999873 4799999999987 44555555555566899999
Q ss_pred eEEEeCCeeeeccCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcC
Q 010129 310 TQVSVGGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKG 389 (517)
Q Consensus 310 ~~i~vg~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~g 389 (517)
++|.|+++.+..+..+||||||++++||++++++|.+++.+....... ....+...|+. ..+|+|+|+|.+
T Consensus 202 ~~i~v~g~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~--~~~~~~~~C~~-------~~~p~i~f~f~~ 272 (339)
T 3fv3_A 202 ASVNLKGSSFSFGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVAR--DQYLYFIDCNT-------DTSGTTVFNFGN 272 (339)
T ss_dssp EEEEESSCEEEEEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEET--TEEEEEECTTC-------CCCSEEEEEETT
T ss_pred EEEEECCEeecCCccEEEeCCCCCEecCHHHHHHHHHHcCCEEccccc--cCceEEEecCC-------CCCCcEEEEECC
Confidence 999999999988889999999999999999999999999865432100 11223334543 358999999966
Q ss_pred CccEEEcCCeeEEEeCCCCeeEEEE-EEEeCCCceeechhhhceeEEEEeCCCCEEEEEecCCCCCCCCccCC
Q 010129 390 GGPFFVNDPIVIVSSEPKGLYLYCL-GVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALP 461 (517)
Q Consensus 390 g~~~~l~~~~~~~~~~~~~~~~~Cl-~~~~~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~~~~~~ 461 (517)
|.+++||+++|++...+ ..|+ ++.. .+.||||+.|||++|+|||++++|||||+++|++ ++++++
T Consensus 273 g~~~~v~~~~~~~~~~~----~~C~~~i~~-~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~--~s~i~~ 338 (339)
T 3fv3_A 273 GAKITVPNTEYVYQNGD----GTCLWGIQP-SDDTILGDNFLRHAYLLYNLDANTISIAQVKYTT--DSSISA 338 (339)
T ss_dssp SCEEEEEGGGGEEECSS----SCEEESEEE-CSSCEECHHHHTTEEEEEETTTTEEEEEEBCCCS--CCCEEE
T ss_pred CCEEEECHHHheeeCCC----CeEEEEEEe-CCcEEeChHHHhCEEEEEECCCCEEEEEecCCCC--ccceEE
Confidence 89999999988876533 3494 4554 6689999999999999999999999999999984 555554
No 6
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1.5e-54 Score=445.47 Aligned_cols=309 Identities=21% Similarity=0.288 Sum_probs=253.6
Q ss_pred eec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CC---CCCCCCCCCCCCcccCCCCCCCCCCCcccccCCC
Q 010129 96 YRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CV---SCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNS 170 (517)
Q Consensus 96 ~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~---~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~ 170 (517)
+++ ++.+..|+++|.||||+|++.|++||||+++||+|. |. .|.. ++.|||++|+|++..
T Consensus 10 ~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~-----------~~~y~~~~SsT~~~~---- 74 (361)
T 1mpp_A 10 PGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVG-----------KRFFDPSSSSTFKET---- 74 (361)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCS-----------SCCBCGGGCTTCEEE----
T ss_pred EEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCC-----------CCcCCCccCCceEec----
Confidence 455 567789999999999999999999999999999998 76 5643 378999999999986
Q ss_pred cccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccC-----CCCCCCCCcee
Q 010129 171 TLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTG-----SFLDGAAPNGL 245 (517)
Q Consensus 171 ~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g-----~~~~~~~~dGi 245 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ ...++++.|||++...+ .++.....+||
T Consensus 75 --------------~~~~~i~Y-g~Gs-~~G~~~~D~v~~g------~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~Gi 132 (361)
T 1mpp_A 75 --------------DYNLNITY-GTGG-ANGIYFRDSITVG------GATVKQQTLAYVDNVSGPTAEQSPDSELFLDGI 132 (361)
T ss_dssp --------------EEEEEEEC-SSCE-EEEEEEEEEEEET------TEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEE
T ss_pred --------------CCeEEEEE-CCce-EEEEEEEEEEEEC------CEEEeceEEEEEEeccCccccccccccCCCCCE
Confidence 68999999 6766 8999999999998 46789999999999876 44444567999
Q ss_pred EeeCCCCCC------------hhHHHhhcCCC-CceeEEeeCCC-CCeeEEeCCCCCC----CCceecceeCCCC-CeEE
Q 010129 246 FGLGMDKTS------------VPSILANQGLI-PNSFSMCFGSD-GTGRISFGDKGSP----GQGETPFSLRQTH-PTYN 306 (517)
Q Consensus 246 lGLg~~~~S------------~~~ql~~~g~i-~~~FS~~l~~~-~~G~L~fGg~d~~----~~~~tp~~~~~~~-~~y~ 306 (517)
||||+..++ ++.+|+++|+| +++||+||.++ ..|.|+||++|++ .+.++|++..... .+|.
T Consensus 133 lGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~ 212 (361)
T 1mpp_A 133 FGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWD 212 (361)
T ss_dssp EECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEE
T ss_pred EEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCceeEEE
Confidence 999997544 55689999999 89999999984 5799999999986 3556666543321 1899
Q ss_pred EEEeEEEeCCeeee--ccCcEE-EeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCC-Ce
Q 010129 307 ITITQVSVGGNAVN--FEFSAI-FDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEY-PV 382 (517)
Q Consensus 307 v~l~~i~vg~~~~~--~~~~~i-iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~-P~ 382 (517)
|.|++|+|+++.+. ....+| |||||++++||+++|++|.+++.+.... ....+...|+.. ..+ |+
T Consensus 213 v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~~-----~~g~~~~~C~~~------~~~~p~ 281 (361)
T 1mpp_A 213 APVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDATE-----SQQGYTVPCSKY------QDSKTT 281 (361)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCEE-----ETTEEEEEHHHH------TTCCCE
T ss_pred EEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcccC-----CCCcEEEECCCc------ccCCCc
Confidence 99999999998874 346799 9999999999999999999999765321 112244568764 456 99
Q ss_pred EEEEEc-C-----CccEEEcCCeeEEEeCCCCeeEEEE-EEEe-CCCceeechhhhceeEEEEeCCCCEEEEEecCCCCC
Q 010129 383 VNLTMK-G-----GGPFFVNDPIVIVSSEPKGLYLYCL-GVVK-SDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGV 454 (517)
Q Consensus 383 i~~~f~-g-----g~~~~l~~~~~~~~~~~~~~~~~Cl-~~~~-~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~ 454 (517)
|+|+|. + |.+++||+++|++....+. ..|+ ++.. ..+.||||+.|||++|+|||++++|||||+++|...
T Consensus 282 i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~~--~~C~~~i~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~~~~~ 359 (361)
T 1mpp_A 282 FSLVLQKSGSSSDTIDVSVPISKMLLPVDKSG--ETCMFIVLPDGGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLASGYE 359 (361)
T ss_dssp EEEEEECTTCSSCEEEEEEEGGGGEEECSSSS--CEEEESEEEESSSCCEEEHHHHTTEEEEEETTTTEEEEEEBCTTTC
T ss_pred EEEEEEcCCcCCCCeEEEECHHHhEEecCCCC--CeeEEEEEeCCCCCEEEChHHhccEEEEEECCCCEEEEEEcccCCC
Confidence 999994 4 7999999998888754333 5797 5555 345899999999999999999999999999999854
No 7
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.3e-54 Score=442.55 Aligned_cols=319 Identities=24% Similarity=0.369 Sum_probs=254.3
Q ss_pred eecccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC---CCCCCCCC-CCCCCCcccCCCCCCCCCCCcccccCCCc
Q 010129 96 YRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD---CVSCVHGL-NSSSGQVIDFNIYSPNTSSTSSKVPCNST 171 (517)
Q Consensus 96 ~~~~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~---C~~C~~~~-~~~~~~~~~~~~ydp~~SsT~~~~~C~~~ 171 (517)
+++...+..|+++|.||||+|++.|++||||+++||+|. |..|..+. ...| ..++.|||++|+|++..
T Consensus 5 ~~l~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C---~~~~~y~~~~SsT~~~~----- 76 (342)
T 3pvk_A 5 VTLHNEQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFC---KQKGTYDPSGSSASQDL----- 76 (342)
T ss_dssp EEEEECSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGG---GTTCCBCGGGCTTCEEE-----
T ss_pred eEEecCCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCC---CCCCcCCCccCcceeec-----
Confidence 344455678999999999999999999999999999975 65553211 0111 24589999999999996
Q ss_pred ccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCC
Q 010129 172 LCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMD 251 (517)
Q Consensus 172 ~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~ 251 (517)
.|.|.+.| +||+.+.|.+++|+|+|+ ...++++.|||++... ..+||||||+.
T Consensus 77 -------------~~~~~i~Y-g~gs~~~G~~~~D~v~ig------~~~v~~~~fg~~~~~~-------~~~GilGLg~~ 129 (342)
T 3pvk_A 77 -------------NTPFKIGY-GDGSSSQGTLYKDTVGFG------GVSIKNQVLADVDSTS-------IDQGILGVGYK 129 (342)
T ss_dssp -------------EEEEEEEC-SSSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEES-------SSSCEEECSCG
T ss_pred -------------CCeEEEEe-cCCCeEEEEEEEEEEEEC------CEEecceEEEEEEccC-------CCccEEEecCc
Confidence 68999999 788889999999999998 4678999999999764 24799999998
Q ss_pred C-------CChhHHHhhcCCC-CceeEEeeCC--CCCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeee
Q 010129 252 K-------TSVPSILANQGLI-PNSFSMCFGS--DGTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVN 320 (517)
Q Consensus 252 ~-------~S~~~ql~~~g~i-~~~FS~~l~~--~~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~ 320 (517)
. .+++.+|+++|+| +++||+||.+ ...|.|+|||+|++ +.+.+.+++.....+|.|.+++|.|+++.+.
T Consensus 130 ~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~ 209 (342)
T 3pvk_A 130 TNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTIN 209 (342)
T ss_dssp GGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE
T ss_pred cccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEec
Confidence 7 4789999999999 8999999987 35799999999987 4555555555556689999999999999988
Q ss_pred cc-CcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCe
Q 010129 321 FE-FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPI 399 (517)
Q Consensus 321 ~~-~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~ 399 (517)
.+ ..+||||||++++||++++++|.+++.+....... . ..+|..+|. ..|+|+|+|.+|.+++||+++
T Consensus 210 ~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~~----~---~~~~~~~C~----~~p~i~f~f~~g~~~~vp~~~ 278 (342)
T 3pvk_A 210 TDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDSN----G---NSFYEVDCN----LSGDVVFNFSKNAKISVPASE 278 (342)
T ss_dssp EEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECTT----S---CEEEEECSC----CCSEEEEEESTTCEEEEEGGG
T ss_pred CCCceEEEeCCCCCeecCHHHHHHHHHHcCCeecccCC----C---ceEEEEecC----CCCceEEEECCCCEEEEcHHH
Confidence 76 78999999999999999999999999766432211 0 123455553 359999999658999999988
Q ss_pred eEEEeC--CCCeeEEEEEEEeCCCceeechhhhceeEEEEeCCCCEEEEEecCCCCCCCCccCCC
Q 010129 400 VIVSSE--PKGLYLYCLGVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPI 462 (517)
Q Consensus 400 ~~~~~~--~~~~~~~Cl~~~~~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~~~~~~~ 462 (517)
|++... ++.....|+..+...+.||||+.|||++|+|||++++|||||+++|++ +++++++
T Consensus 279 ~~~~~~~~~g~~~~~C~~~i~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~~~~--~s~iv~i 341 (342)
T 3pvk_A 279 FAASLQGDDGQPYDKCQLLFDVNDANILGDNFLRSAYIVYDLDDNEISLAQVKYTS--ASSISAL 341 (342)
T ss_dssp GEEC----------CEEESEEECTTCEECHHHHTTEEEEEETTTTEEEEEEBCCCS--CCCEEEC
T ss_pred heeeccccCCCcCCeeEEEEeeCCCeEeCHHHHhcEEEEEECCCCEEEEEecCCCC--CCCEEEe
Confidence 877521 110014697766666799999999999999999999999999999973 4555543
No 8
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=4.3e-55 Score=450.99 Aligned_cols=302 Identities=21% Similarity=0.367 Sum_probs=250.9
Q ss_pred eeec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CC----CCCCCCCCCCCCcccCCCCCCCCCCCcccccC
Q 010129 95 TYRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CV----SCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPC 168 (517)
Q Consensus 95 ~~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~----~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C 168 (517)
.+++ |+.+..|+++|.||||||+|.|++||||+++||+|. |. .|.. ++.|||++|+||+..
T Consensus 52 ~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~~C~~~~~~C~~-----------~~~y~~~~SsT~~~~-- 118 (383)
T 2x0b_A 52 SVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVY-----------HKLFDASDSSSYKHN-- 118 (383)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTSHHHHT-----------SCCBCGGGCTTCEEE--
T ss_pred eEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEeccCCCCCcccccC-----------CCCCCCCCCCcEEEC--
Confidence 3555 678899999999999999999999999999999998 64 3543 378999999999985
Q ss_pred CCcccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEee
Q 010129 169 NSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGL 248 (517)
Q Consensus 169 ~~~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGL 248 (517)
+|.|.+.| ++|+ +.|++++|+|+|+ ...++ +.|||++.+.+..+....+||||||
T Consensus 119 ----------------~~~~~i~Y-g~Gs-~~G~~~~Dtv~ig------~~~v~-~~Fg~a~~~~g~~f~~~~~dGIlGL 173 (383)
T 2x0b_A 119 ----------------GTELTLRY-STGT-VSGFLSQDIITVG------GITVT-QMFGEVTEMPALPFMLAEFDGVVGM 173 (383)
T ss_dssp ----------------EEEEEEEC-SSCE-EEEEEEEEEEEET------TEEEE-EEEEEEEECCHHHHTTCSSSEEEEC
T ss_pred ----------------CcEEEEEc-CCcc-EEEEEEeeEEEEc------CceEE-EEEEEEEecCCcccccCCCceEecc
Confidence 78999999 5655 8999999999998 45677 9999999987754555567999999
Q ss_pred CCCCCC------hhHHHhhcCCC-CceeEEeeCCC------CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEe
Q 010129 249 GMDKTS------VPSILANQGLI-PNSFSMCFGSD------GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSV 314 (517)
Q Consensus 249 g~~~~S------~~~ql~~~g~i-~~~FS~~l~~~------~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~v 314 (517)
|+..++ +..+|+++|+| +++||+||.++ ..|.|+|||+|++ +.+.+.|++.....+|.|.|++|+|
T Consensus 174 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~v~l~~i~v 253 (383)
T 2x0b_A 174 GFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSV 253 (383)
T ss_dssp SCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCEEEECEEEE
T ss_pred CCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEEEEEeEEEe
Confidence 998765 56789999999 89999999983 2799999999987 5567777776677899999999999
Q ss_pred CCeeee--ccCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCcc
Q 010129 315 GGNAVN--FEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGP 392 (517)
Q Consensus 315 g~~~~~--~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~ 392 (517)
+++.+. ....+||||||+++++|++++++|.+++++.. ....+...|+.. ..+|+|+|+| +|.+
T Consensus 254 ~~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~-------~~g~~~v~C~~~------~~~P~i~f~~-~g~~ 319 (383)
T 2x0b_A 254 GSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK-------RLFDYVVKCNEG------PTLPDISFHL-GGKE 319 (383)
T ss_dssp SSCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE-------CSSCEEEEGGGT------TTCCCEEEEE-TTEE
T ss_pred CCceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCcc-------cCCcEEEecccc------ccCceEEEEE-CCEE
Confidence 998753 34679999999999999999999999987643 112234568764 4789999999 8899
Q ss_pred EEEcCCeeEEEeCC-CCeeEEEEE-EEeC------CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 393 FFVNDPIVIVSSEP-KGLYLYCLG-VVKS------DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 393 ~~l~~~~~~~~~~~-~~~~~~Cl~-~~~~------~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
++|++++|++.... +. ..|+. +... .+.||||+.|||++|+|||++++|||||+++
T Consensus 320 ~~l~~~~yi~~~~~~~~--~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGfA~a~ 383 (383)
T 2x0b_A 320 YTLTSADYVFQESYSSK--KLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 383 (383)
T ss_dssp EEECHHHHBCCCCCCTT--SEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEECHHHhEeeccCCCC--CeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeEEEcC
Confidence 99999888775442 22 47984 5432 3489999999999999999999999999874
No 9
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-54 Score=443.12 Aligned_cols=306 Identities=23% Similarity=0.390 Sum_probs=247.1
Q ss_pred eec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CC--CCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCc
Q 010129 96 YRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CV--SCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNST 171 (517)
Q Consensus 96 ~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~--~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~ 171 (517)
+++ ++.+..|+++|.||||+|+|.|++||||+++||+|. |. .|. .++.|||++|+|++..
T Consensus 15 ~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~~~~C~-----------~~~~y~~~~SsT~~~~----- 78 (351)
T 1tzs_A 15 EPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCTSPACK-----------THSRFQPSQSSTYSQP----- 78 (351)
T ss_dssp CTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSGGGT-----------TSCCBCGGGCTTCBCC-----
T ss_pred eeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCccccC-----------CCCcCCcccCcceEEC-----
Confidence 344 567788999999999999999999999999999998 64 453 2388999999999985
Q ss_pred ccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCC
Q 010129 172 LCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMD 251 (517)
Q Consensus 172 ~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~ 251 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ ...++++.|||++.+.+..+.....+||||||+.
T Consensus 79 -------------~~~~~i~Y-g~Gs-~~G~~~~D~v~ig------~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 137 (351)
T 1tzs_A 79 -------------GQSFSIQY-GTGS-LSGIIGADQVSVE------GLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYP 137 (351)
T ss_dssp -------------SCEEEEES-SSCE-EEEEEEEEEEEET------TEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCG
T ss_pred -------------CCEEEEEe-CCCC-eEEEEEEeEEEEC------CeEECCeEEEEEEeccccccccCCCceEEecCCc
Confidence 79999999 5665 8999999999998 4578899999999887755544567999999998
Q ss_pred CCC------hhHHHhhcCCC-CceeEEeeCCCC----CeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeee
Q 010129 252 KTS------VPSILANQGLI-PNSFSMCFGSDG----TGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAV 319 (517)
Q Consensus 252 ~~S------~~~ql~~~g~i-~~~FS~~l~~~~----~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~ 319 (517)
.++ +..+|+++|+| +++||+||.+.. .|.|+|||+|++ +.+.+.|++.....+|.|.|++|+|+++.+
T Consensus 138 ~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~ 217 (351)
T 1tzs_A 138 SLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVM 217 (351)
T ss_dssp GGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEE
T ss_pred cccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceE
Confidence 754 66789999999 899999999842 799999999987 444455555444578999999999999886
Q ss_pred ec--cCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcC
Q 010129 320 NF--EFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVND 397 (517)
Q Consensus 320 ~~--~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~ 397 (517)
.. ...+||||||++++||+++|++|.+++.+.... ..+...|+.. ..+|+|+|+| +|.+++||+
T Consensus 218 ~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-------g~~~~~C~~~------~~~P~i~f~f-~g~~~~i~~ 283 (351)
T 1tzs_A 218 FCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAPVD-------GEYAVECANL------NVMPDVTFTI-NGVPYTLSP 283 (351)
T ss_dssp ECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEECS-------SSEEECGGGG------GGSCCEEEEE-TTEEEEECT
T ss_pred EcCCCceEEeccCCcceeCCHHHHHHHHHHhCCcccC-------CeEEEeCCCC------ccCCcEEEEE-CCEEEEECH
Confidence 43 467999999999999999999999998654211 2234467764 4689999999 889999999
Q ss_pred CeeEEEeCCCCeeEEEEE-EEeC------CCceeechhhhceeEEEEeCCCCEEEEEecCCCC
Q 010129 398 PIVIVSSEPKGLYLYCLG-VVKS------DNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYG 453 (517)
Q Consensus 398 ~~~~~~~~~~~~~~~Cl~-~~~~------~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~ 453 (517)
++|++.....+ ...|+. +... .+.||||+.|||++|+|||++++|||||+++|..
T Consensus 284 ~~yi~~~~~~~-~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~~~s 345 (351)
T 1tzs_A 284 TAYTLLDFVDG-MQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAVPWS 345 (351)
T ss_dssp TTSEECC------CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC---
T ss_pred HHhEeeccCCC-CCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECCccc
Confidence 98887643211 146975 5442 3489999999999999999999999999999865
No 10
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=3.3e-54 Score=436.41 Aligned_cols=298 Identities=23% Similarity=0.407 Sum_probs=243.7
Q ss_pred ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCC
Q 010129 99 NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQK 177 (517)
Q Consensus 99 ~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~ 177 (517)
++.+..|+++|.||||+|+|.|++||||+++||+|. |..| . ..++.|||++|+|++..
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~---------~~~~~y~~~~SsT~~~~----------- 69 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-G---------SGQTKYDPNQSSTYQAD----------- 69 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-C---------TTSCCBCGGGCTTCEEE-----------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-h---------cCCCCCCcccCCCeeeC-----------
Confidence 567789999999999999999999999999999999 8888 2 23489999999999984
Q ss_pred CCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCC----
Q 010129 178 QCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKT---- 253 (517)
Q Consensus 178 ~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~---- 253 (517)
.|.|.+.| +||+.+.|.+++|+|+|+ ...++++.|||++...+.|... ..+||||||+..+
T Consensus 70 -------~~~~~i~Y-g~Gs~~~G~~~~D~v~~g------~~~v~~~~fg~~~~~~~~f~~~-~~~GilGLg~~~~s~~~ 134 (325)
T 2apr_A 70 -------GRTWSISY-GDGSSASGILAKDNVNLG------GLLIKGQTIELAKREAASFASG-PNDGLLGLGFDTITTVR 134 (325)
T ss_dssp -------EEEEEEEC-TTSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEECHHHHTS-SCSEEEECSCGGGCSST
T ss_pred -------CCEEEEEE-CCCCCEEEEEEEEEEEEC------CEEECcEEEEEEeccCcccccC-CCceEEEeCCccccccc
Confidence 68999999 788889999999999998 4578899999999876654332 3689999999865
Q ss_pred ---ChhHHHhhcCCC-CceeEEeeCC---CCCeeEEeCCCCCC-CCceecceeCC-CCCeEEEEEeEEEeCCeeeeccCc
Q 010129 254 ---SVPSILANQGLI-PNSFSMCFGS---DGTGRISFGDKGSP-GQGETPFSLRQ-THPTYNITITQVSVGGNAVNFEFS 324 (517)
Q Consensus 254 ---S~~~ql~~~g~i-~~~FS~~l~~---~~~G~L~fGg~d~~-~~~~tp~~~~~-~~~~y~v~l~~i~vg~~~~~~~~~ 324 (517)
++.++|+++|+| +++||+||.+ ...|.|+||++|++ +.+.+.|++.. ...+|.|.+++|+||++....+..
T Consensus 135 ~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~~~~~~~~~ 214 (325)
T 2apr_A 135 GVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGTSTVASSFD 214 (325)
T ss_dssp TCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETTEEEECCEE
T ss_pred CCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECCEecCCCce
Confidence 467899999999 9999999964 46799999999987 33444444432 356899999999999954344578
Q ss_pred EEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeEEEe
Q 010129 325 AIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSS 404 (517)
Q Consensus 325 ~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~ 404 (517)
+||||||++++||+++|+++++++.+.+... ..+...|+. ..+|+|+|+| +|.+++||+++|++..
T Consensus 215 ~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~------g~~~~~C~~-------~~~p~i~f~f-~g~~~~ip~~~~~~~~ 280 (325)
T 2apr_A 215 GILDTGTTLLILPNNIAASVARAYGASDNGD------GTYTISCDT-------SAFKPLVFSI-NGASFQVSPDSLVFEE 280 (325)
T ss_dssp EEECTTCSSEEEEHHHHHHHHHHHTCEECSS------SCEEECSCG-------GGCCCEEEEE-TTEEEEECGGGGEEEE
T ss_pred EEEecCCccEECCHHHHHHHHHHHhcccCCC------CeEEEECCC-------CCCCcEEEEE-CCEEEEECHHHEEEcC
Confidence 9999999999999999999999997764321 112234542 3589999999 6669999988877754
Q ss_pred CCCCeeEEEEEEEeC--CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 405 EPKGLYLYCLGVVKS--DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 405 ~~~~~~~~Cl~~~~~--~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
.+ ..|++.+.. .+.||||+.|||++|+|||++++|||||+++
T Consensus 281 ~~----~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 281 FQ----GQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ET----TEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CC----CeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 42 469875432 4589999999999999999999999999874
No 11
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.1e-54 Score=439.52 Aligned_cols=300 Identities=23% Similarity=0.383 Sum_probs=246.0
Q ss_pred eec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-C--CCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCc
Q 010129 96 YRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-C--VSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNST 171 (517)
Q Consensus 96 ~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C--~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~ 171 (517)
.++ |+.+..|+++|.||||+|++.|++||||+++||+|. | ..|.. ++.|||++|+|++..
T Consensus 6 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~~----- 69 (323)
T 3cms_A 6 VPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCKSNACKN-----------HQRFDPRKSSTFQNL----- 69 (323)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-----------SCCBCGGGCTTCEEE-----
T ss_pred eeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCCcccccC-----------CCCCCCccCCCeEEC-----
Confidence 445 667889999999999999999999999999999998 6 34542 378999999999986
Q ss_pred ccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCC
Q 010129 172 LCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMD 251 (517)
Q Consensus 172 ~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~ 251 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ ...++++.|||++.+.+..+.....+||||||+.
T Consensus 70 -------------~~~~~i~Y-g~Gs-~~G~~~~D~v~ig------~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 128 (323)
T 3cms_A 70 -------------GKPLSIHY-GTGS-MQGILGYDTVTVS------NIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYP 128 (323)
T ss_dssp -------------EEEEEEEE-TTEE-EEEEEEEEEEEET------TEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCG
T ss_pred -------------CcEEEEEe-CCCC-eEEEEEEEEEEEC------CeEEeccEEEEEEecccccccccCCceEEecCcc
Confidence 78999999 6665 8999999999998 4578899999999886633332346899999998
Q ss_pred CC------ChhHHHhhcCCC-CceeEEeeCCC-CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeeec-
Q 010129 252 KT------SVPSILANQGLI-PNSFSMCFGSD-GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVNF- 321 (517)
Q Consensus 252 ~~------S~~~ql~~~g~i-~~~FS~~l~~~-~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~- 321 (517)
.+ ++..+|+++|+| +++||+||.++ ..|.|+||++|++ +.+.+.|++.....+|.|.|++|+|+++.+..
T Consensus 129 ~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~ 208 (323)
T 3cms_A 129 SLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVACE 208 (323)
T ss_dssp GGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEEST
T ss_pred hhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEeecC
Confidence 64 467899999999 99999999983 4599999999987 45556666655567899999999999998764
Q ss_pred -cCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCee
Q 010129 322 -EFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIV 400 (517)
Q Consensus 322 -~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~ 400 (517)
...+||||||++++||++++++|.+++.+... ....+...|+.. ..+|+|+|+| +|.+++||+++|
T Consensus 209 ~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~------~~g~~~~~C~~~------~~~P~i~f~f-~g~~~~i~~~~y 275 (323)
T 3cms_A 209 GGCQAILDTGTSKLVGPSSDILNIQQAIGATQN------QYGEFDIDCDNL------SYMPTVVFEI-NGKMYPLTPSAY 275 (323)
T ss_dssp TCEEEEECTTCCSEEECHHHHHHHHHHHTCEEE------TTTEEEECTTCT------TTSCCEEEEE-TTEEEEECHHHH
T ss_pred CCcEEEEecCCccEeCCHHHHHHHHHHhCCeec------CCCcEEEECCCC------ccCceEEEEE-CCEEEEECHHHh
Confidence 46799999999999999999999999865321 111223356543 4789999999 889999999888
Q ss_pred EEEeCCCCeeEEEEE-EEeC--CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 401 IVSSEPKGLYLYCLG-VVKS--DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 401 ~~~~~~~~~~~~Cl~-~~~~--~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
++. . + ..|+. +... .+.||||+.|||++|+|||++++|||||+++
T Consensus 276 ~~~-~-~---~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 276 TSQ-D-Q---GFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp EEE-E-T---TEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccC-C-C---CEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 876 2 2 46985 5543 3589999999999999999999999999874
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.3e-53 Score=432.84 Aligned_cols=301 Identities=22% Similarity=0.393 Sum_probs=245.8
Q ss_pred eeec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCC--CCCCCCCCCCCcccCCCCCCCCCCCcccccCCC
Q 010129 95 TYRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVS--CVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNS 170 (517)
Q Consensus 95 ~~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~--C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~ 170 (517)
.+++ ++.+..|+++|.||||+|+|.|++||||+++||+|. |.. |.. ++.|||++|+|++..
T Consensus 4 ~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~~---- 68 (329)
T 1dpj_A 4 DVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGSLACFL-----------HSKYDHEASSSYKAN---- 68 (329)
T ss_dssp EEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-----------SCCBCGGGCTTCEEE----
T ss_pred ceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCCcccCC-----------cCcCCcccCcCeEEC----
Confidence 3455 567789999999999999999999999999999998 765 433 378999999999984
Q ss_pred cccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCC
Q 010129 171 TLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGM 250 (517)
Q Consensus 171 ~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~ 250 (517)
+|.|.+.| ++| .+.|.+++|+|+|+ ...++++.|||++...+..+.....+||||||+
T Consensus 69 --------------~~~~~i~Y-g~G-s~~G~~~~D~v~ig------~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~ 126 (329)
T 1dpj_A 69 --------------GTEFAIQY-GTG-SLEGYISQDTLSIG------DLTIPKQDFAEATSEPGLTFAFGKFDGILGLGY 126 (329)
T ss_dssp --------------EEEEEEEE-TTE-EEEEEEEEEEEEET------TEEEEEEEEEEEEECCHHHHTTCSCSEEEECSC
T ss_pred --------------CcEEEEEE-CCc-eEEEEEEEEEEEEC------CeEECCeEEEEEEecCccccccCCcceEEEeCC
Confidence 78999999 566 78999999999998 457899999999987663233345689999999
Q ss_pred CCCCh------hHHHhhcCCC-CceeEEeeCCC-----CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCe
Q 010129 251 DKTSV------PSILANQGLI-PNSFSMCFGSD-----GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGN 317 (517)
Q Consensus 251 ~~~S~------~~ql~~~g~i-~~~FS~~l~~~-----~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~ 317 (517)
...++ ..+|+++|+| +++||+||.+. ..|.|+||++|++ +.+.+.|++.....+|.|.|++|+|+++
T Consensus 127 ~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~ 206 (329)
T 1dpj_A 127 DTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDE 206 (329)
T ss_dssp GGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTE
T ss_pred chhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCe
Confidence 87654 4689999999 89999999873 3699999999987 4455556665556789999999999999
Q ss_pred eeec-cCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEc
Q 010129 318 AVNF-EFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVN 396 (517)
Q Consensus 318 ~~~~-~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~ 396 (517)
.+.. +..+||||||++++||++++++|.+++.+. .. . ..||.++|... ..+|+|+|+| +|.+++|+
T Consensus 207 ~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~--~-----~g~~~~~C~~~-~~~P~i~f~f-~g~~~~i~ 273 (329)
T 1dpj_A 207 YAELESHGAAIDTGTSLITLPSGLAEMINAEIGAK----KG--W-----TGQYTLDCNTR-DNLPDLIFNF-NGYNFTIG 273 (329)
T ss_dssp EEECSSCEEEECTTCSCEEECHHHHHHHHHHHTCE----EC--T-----TSSEEECGGGG-GGCCCEEEEE-TTEEEEEC
T ss_pred EecCCCccEEeeCCCCcEECCHHHHHHHHHHhCCc----cC--C-----CCeEEEECCCC-CcCCcEEEEE-CCEEEEEC
Confidence 8864 578999999999999999999999998644 11 1 12444444322 5789999999 78999999
Q ss_pred CCeeEEEeCCCCeeEEEEE-EEeC------CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 397 DPIVIVSSEPKGLYLYCLG-VVKS------DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 397 ~~~~~~~~~~~~~~~~Cl~-~~~~------~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+++|++... ..|+. +... .+.||||+.|||++|+|||++++|||||+++
T Consensus 274 ~~~y~~~~~-----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 274 PYDYTLEVS-----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp TTTSEEEET-----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred HHHhEecCC-----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 998887643 25974 5432 2489999999999999999999999999874
No 13
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=5.1e-54 Score=434.96 Aligned_cols=299 Identities=22% Similarity=0.397 Sum_probs=244.4
Q ss_pred eec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CC--CCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCc
Q 010129 96 YRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CV--SCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNST 171 (517)
Q Consensus 96 ~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~--~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~ 171 (517)
+++ |+.+..|+++|.||||+|++.|++||||+++||+|. |. .|.. ++.|||++|+|++..
T Consensus 4 ~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~~----- 67 (324)
T 1am5_A 4 EQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCSAQACSN-----------HNKFKPRQSSTYVET----- 67 (324)
T ss_dssp EEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCCSHHHHT-----------SCCBCGGGCTTCEEE-----
T ss_pred eeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCCcccccC-----------CCcCCCccCCCeEeC-----
Confidence 344 567789999999999999999999999999999998 65 3533 378999999999986
Q ss_pred ccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCC
Q 010129 172 LCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMD 251 (517)
Q Consensus 172 ~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~ 251 (517)
+|.|.+.| ++|+ +.|.+++|+|+|++ ..++++.|||++.+.+..+.....+||||||+.
T Consensus 68 -------------~~~~~i~Y-g~Gs-~~G~~~~D~v~~g~------~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 126 (324)
T 1am5_A 68 -------------GKTVDLTY-GTGG-MRGILGQDTVSVGG------GSDPNQELGESQTEPGPFQAAAPFDGILGLAYP 126 (324)
T ss_dssp -------------EEEEEEEC-SSCE-EEEEEEEEEEESSS------SCEEEEEEEEEEECCSTTTTTCSSSEEEECSCG
T ss_pred -------------CcEEEEEE-CCCC-eEEEEEECceeECC------cEEcccEEEEEEecccccccCCCCceEEecCCc
Confidence 78999999 6665 59999999999984 467899999999987765555567999999998
Q ss_pred CC------ChhHHHhhcCCC-CceeEEeeCCC--CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeeec
Q 010129 252 KT------SVPSILANQGLI-PNSFSMCFGSD--GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVNF 321 (517)
Q Consensus 252 ~~------S~~~ql~~~g~i-~~~FS~~l~~~--~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~ 321 (517)
.. ++..+|+++|+| +++||+||.+. ..|.|+||++|++ +.+.+.|++.....+|.|.+++|+|+++.+..
T Consensus 127 ~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~ 206 (324)
T 1am5_A 127 SIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAAC 206 (324)
T ss_dssp GGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECCC
T ss_pred cccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceeec
Confidence 65 467799999999 99999999984 4799999999987 33333333333356899999999999987532
Q ss_pred -cCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCee
Q 010129 322 -EFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIV 400 (517)
Q Consensus 322 -~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~ 400 (517)
...+||||||++++||+++|++|.+++.+. . . . ..+...|+.. ..+|+|+|+| +|.+++||+++|
T Consensus 207 ~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-~--~---~-g~~~~~C~~~------~~~P~i~f~f-~g~~~~i~~~~y 272 (324)
T 1am5_A 207 EGCQAIVDTGTSKIVAPVSALANIMKDIGAS-E--N---Q-GEMMGNCASV------QSLPDITFTI-NGVKQPLPPSAY 272 (324)
T ss_dssp CCEEEEECTTCSSEEECTTTHHHHHHHHTCE-E--C---C-CCEECCTTSS------SSSCCEEEEE-TTEEEEECHHHH
T ss_pred cCceEEEecCCccEECCHHHHHHHHHHhCCc-c--c---C-CcEEEeCCCc------ccCCcEEEEE-CCEEEEECHHHh
Confidence 367999999999999999999999998765 1 1 1 2233456543 5789999999 889999999888
Q ss_pred EEEeCCCCeeEEEEE-EEeC------CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 401 IVSSEPKGLYLYCLG-VVKS------DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 401 ~~~~~~~~~~~~Cl~-~~~~------~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
++.. + ..|+. +... .+.||||+.|||++|+|||++++|||||+++
T Consensus 273 ~~~~-~----~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 273 IEGD-Q----AFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp EEES-S----SCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cccC-C----CeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 8765 2 35974 5442 3489999999999999999999999999974
No 14
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=7.7e-54 Score=434.58 Aligned_cols=297 Identities=24% Similarity=0.418 Sum_probs=245.5
Q ss_pred ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCC--CCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCC
Q 010129 99 NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVS--CVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCEL 175 (517)
Q Consensus 99 ~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~--C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~ 175 (517)
.+.+..|+++|.||||+|++.|++||||+++||+|. |.. |.. ++.|||++|+|++..
T Consensus 8 ~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~C~~-----------~~~y~~~~SsT~~~~--------- 67 (329)
T 1htr_B 8 AYMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQSQACTS-----------HSRFNPSESSTYSTN--------- 67 (329)
T ss_dssp GGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSHHHHT-----------SCCBCGGGCTTCEEE---------
T ss_pred EEcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCCcccCC-----------CCcCCCccCCCeEEC---------
Confidence 355678999999999999999999999999999998 653 533 378999999999986
Q ss_pred CCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCC-
Q 010129 176 QKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTS- 254 (517)
Q Consensus 176 ~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S- 254 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ ...++++.|||++.+.+..+.....+||||||+...+
T Consensus 68 ---------~~~~~i~Y-g~gs-~~G~~~~D~v~~g------~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 130 (329)
T 1htr_B 68 ---------GQTFSLQY-GSGS-LTGFFGYDTLTVQ------SIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSV 130 (329)
T ss_dssp ---------EEEEEEEE-TTEE-EEEEEEEEEEEET------TEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCC
T ss_pred ---------CcEEEEEe-CCCC-eEEEEEeeeEEEc------ceEECceEEEEEEEccccccccCCCceEEecCCCcccc
Confidence 78999999 6665 5999999999998 4578999999999887754444567999999998754
Q ss_pred -----hhHHHhhcCCC-CceeEEeeCCCC---CeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeee---c
Q 010129 255 -----VPSILANQGLI-PNSFSMCFGSDG---TGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVN---F 321 (517)
Q Consensus 255 -----~~~ql~~~g~i-~~~FS~~l~~~~---~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~---~ 321 (517)
+..+|+++|+| +++||+||.+.. .|.|+||++|++ +.+.+.|++.....+|.|.+++|+|+++.+. .
T Consensus 131 ~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~ 210 (329)
T 1htr_B 131 DEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSE 210 (329)
T ss_dssp TTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTT
T ss_pred cCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCC
Confidence 67899999999 999999999843 799999999987 4455556665556789999999999998765 2
Q ss_pred cCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeE
Q 010129 322 EFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVI 401 (517)
Q Consensus 322 ~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~ 401 (517)
...+||||||++++||+++|++|.+++.+.... . ..+...|+.. ..+|+|+|+| +|.+++||+++|+
T Consensus 211 ~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~~~-----~-g~~~~~C~~~------~~~P~i~f~f-~g~~~~i~~~~y~ 277 (329)
T 1htr_B 211 GCQAIVDTGTSLLTVPQQYMSALLQATGAQEDE-----Y-GQFLVNCNSI------QNLPSLTFII-NGVEFPLPPSSYI 277 (329)
T ss_dssp CEEEEECTTCCSEEEEGGGHHHHHHHHTCEECT-----T-SCEEECGGGG------GGSCCEEEEE-TTEEEEECHHHHE
T ss_pred CceEEEecCCccEECCHHHHHHHHHHhCCeecC-----C-CeEEEeCCCc------ccCCcEEEEE-CCEEEEECHHHhc
Confidence 467999999999999999999999998654311 1 2234567764 4789999999 8899999998888
Q ss_pred EEeCCCCeeEEEEE-EEeC------CC-ceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 402 VSSEPKGLYLYCLG-VVKS------DN-VNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 402 ~~~~~~~~~~~Cl~-~~~~------~~-~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+... + .|+. +... .+ .||||+.|||++|+|||++++|||||+++
T Consensus 278 ~~~~-g----~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 278 LSNN-G----YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp EECS-S----CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccCC-C----EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 7654 2 4974 5432 23 79999999999999999999999999874
No 15
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=2.6e-54 Score=436.42 Aligned_cols=299 Identities=22% Similarity=0.372 Sum_probs=246.7
Q ss_pred ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCC
Q 010129 99 NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQK 177 (517)
Q Consensus 99 ~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~ 177 (517)
|+.+..|+++|.||||+|++.|++||||+++||+|. |.. ..| ..++.|||++|+|++..
T Consensus 7 n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~~---~~C------~~~~~y~~~~SsT~~~~----------- 66 (320)
T 4aa9_A 7 SYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCKS---NVC------KNHHRFDPRKSSTFRNL----------- 66 (320)
T ss_dssp -CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCS---HHH------HTSCCBCGGGCTTCEEE-----------
T ss_pred eccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCCc---ccc------CCCCCCCCCCCcCeEcC-----------
Confidence 677889999999999999999999999999999998 653 222 22388999999999996
Q ss_pred CCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCC----
Q 010129 178 QCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKT---- 253 (517)
Q Consensus 178 ~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~---- 253 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ ...++++.|||++...+..+.....+||||||+...
T Consensus 67 -------~~~~~i~Y-g~gs-~~G~~~~D~v~ig------~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 131 (320)
T 4aa9_A 67 -------GKPLSIHY-GTGS-MEGFLGYDTVTVS------NIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEY 131 (320)
T ss_dssp -------EEEEEEEE-TTEE-EEEEEEEEEEEET------TEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTT
T ss_pred -------CcEEEEEE-CCcE-EEEEEEEEEEEEC------CEeecCeEEEEEEEcccccccccCcccEEecCcccccccC
Confidence 78999999 6665 7999999999998 467899999999988764444445689999998754
Q ss_pred --ChhHHHhhcCCC-CceeEEeeCC-CCCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeeec--cCcEE
Q 010129 254 --SVPSILANQGLI-PNSFSMCFGS-DGTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVNF--EFSAI 326 (517)
Q Consensus 254 --S~~~ql~~~g~i-~~~FS~~l~~-~~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~~--~~~~i 326 (517)
++..+|+++|+| +++||+||.+ ...|.|+|||+|++ +.+.+.|++.....+|.|.+++|+|+++.+.. ...+|
T Consensus 132 ~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~i 211 (320)
T 4aa9_A 132 SVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVACVGGCQAI 211 (320)
T ss_dssp CCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEESTTCEEEE
T ss_pred CCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEeccCCCcEEE
Confidence 477899999999 9999999998 47899999999987 55666666666677899999999999998875 36799
Q ss_pred EeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeEEEeCC
Q 010129 327 FDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEP 406 (517)
Q Consensus 327 iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~ 406 (517)
|||||++++||++++++|.+++.+... ....+...|+.. ..+|+|+|+| +|.+++||+++|+...
T Consensus 212 iDsGtt~~~lP~~~~~~i~~~~~~~~~------~~g~~~~~C~~~------~~~p~i~f~f-~g~~~~l~~~~y~~~~-- 276 (320)
T 4aa9_A 212 LDTGTSVLFGPSSDILKIQMAIGATEN------RYGEFDVNCGNL------RSMPTVVFEI-NGRDYPLSPSAYTSKD-- 276 (320)
T ss_dssp ECTTCSSEEEEHHHHHHHHHHTTCEEC------TTSCEEECGGGG------GGCCCEEEEE-TTEEEEECHHHHEEEE--
T ss_pred EECCCCcEECCHHHHHHHHHHhCCccc------CCCcEEEeCCCC------CcCceEEEEE-CCEEEEECHHHhccCC--
Confidence 999999999999999999999865421 112233456543 5789999999 8999999988887652
Q ss_pred CCeeEEEEE-EEeC--CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 407 KGLYLYCLG-VVKS--DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 407 ~~~~~~Cl~-~~~~--~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+ ..|+. +... .+.||||+.|||++|+|||++++|||||+++
T Consensus 277 ~---~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 277 Q---GFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp T---TEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C---CeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 2 46975 5443 2479999999999999999999999999974
No 16
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4.9e-54 Score=438.25 Aligned_cols=309 Identities=20% Similarity=0.359 Sum_probs=250.0
Q ss_pred CCceeec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCC
Q 010129 92 GNDTYRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCN 169 (517)
Q Consensus 92 ~~~~~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~ 169 (517)
+...+++ ++.+..|+++|.||||+|++.|++||||+++||+|. |..|. ..| ..++.|||++|+|++..
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~-~~C------~~~~~y~~~~SsT~~~~--- 75 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLY-TAC------VYHKLFDASDSSSYKHN--- 75 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTC-HHH------HTSCCBCGGGCTTCEEE---
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCC-Ccc------cCCCCCCCCcCcCeeEC---
Confidence 3345566 778899999999999999999999999999999998 76211 111 13388999999999985
Q ss_pred CcccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeC
Q 010129 170 STLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLG 249 (517)
Q Consensus 170 ~~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg 249 (517)
+|.|.+.| ++|+ +.|.+++|+|+|++ ..+ ++.|||++...+..+.....+||||||
T Consensus 76 ---------------~~~~~i~Y-g~gs-~~G~~~~D~v~ig~------~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg 131 (341)
T 3k1w_A 76 ---------------GTELTLRY-STGT-VSGFLSQDIITVGG------ITV-TQMFGEVTEMPALPFMLAEFDGVVGMG 131 (341)
T ss_dssp ---------------EEEEEEEE-TTEE-EEEEEEEEEEEETT------EEE-EEEEEEEEECCHHHHTTCSSSEEEECS
T ss_pred ---------------CCEEEEEE-CCcE-EEEEEEEEEEEECC------cee-eEEEEEEEEccccccccCCcceEEECC
Confidence 78999999 5665 89999999999984 567 999999998876533444579999999
Q ss_pred CCCCC------hhHHHhhcCCC-CceeEEeeCCCC------CeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeC
Q 010129 250 MDKTS------VPSILANQGLI-PNSFSMCFGSDG------TGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVG 315 (517)
Q Consensus 250 ~~~~S------~~~ql~~~g~i-~~~FS~~l~~~~------~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg 315 (517)
+...+ +..+|+++|+| +++||+||.++. .|.|+|||+|++ +.+.+.|++.....+|.|.+++|+|+
T Consensus 132 ~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~ 211 (341)
T 3k1w_A 132 FIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVG 211 (341)
T ss_dssp CGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEET
T ss_pred chhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEEC
Confidence 98764 67899999999 899999999853 799999999987 55666666666678999999999999
Q ss_pred Ceeeec--cCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccE
Q 010129 316 GNAVNF--EFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPF 393 (517)
Q Consensus 316 ~~~~~~--~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~ 393 (517)
++.+.. ...+||||||++++||++++++|.+++.+... .. . +...|... ..+|+|+|+| +|.++
T Consensus 212 ~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~~-----~~-g-~~~~C~~~------~~~p~i~f~f-~g~~~ 277 (341)
T 3k1w_A 212 SSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKR-----LF-D-YVVKCNEG------PTLPDISFHL-GGKEY 277 (341)
T ss_dssp TEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEC-----SS-C-EEEEGGGG------GGCCCEEEEE-TTEEE
T ss_pred CEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCeec-----CC-C-eEEeCCCC------CcCCcEEEEE-CCEEE
Confidence 997543 46799999999999999999999999865421 11 1 33446543 5789999999 89999
Q ss_pred EEcCCeeEEEeCC-CCeeEEEEE-EEeC------CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 394 FVNDPIVIVSSEP-KGLYLYCLG-VVKS------DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 394 ~l~~~~~~~~~~~-~~~~~~Cl~-~~~~------~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+|++++|++.... +. ..|+. +... .+.||||+.|||++|+|||++++|||||+++
T Consensus 278 ~l~~~~~~~~~~~~~~--~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 278 TLTSADYVFQESYSSK--KLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp EECHHHHBCCSCCCTT--SEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EECHHHheeEccCCCC--CeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9998877765432 23 57975 4441 2489999999999999999999999999986
No 17
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.3e-53 Score=442.57 Aligned_cols=327 Identities=22% Similarity=0.416 Sum_probs=254.9
Q ss_pred ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCC-
Q 010129 99 NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQK- 177 (517)
Q Consensus 99 ~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~- 177 (517)
++.+.+|+++|.||||+|+|.|++||||+++||+|. . +.+|+|++.++|.+..|...+
T Consensus 17 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~-------------------~~~Sst~~~~~C~s~~C~~~~~ 75 (403)
T 3aup_A 17 DGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE--Q-------------------QYSSKTYQAPFCHSTQCSRANT 75 (403)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--S-------------------CCCCSSCBCCCTTBHHHHHTTC
T ss_pred CCCCceEEEEEECCCCCceeEEEEECCCCceeECCC--C-------------------CCCCCCCCccCCCCccccCccc
Confidence 456778999999999999999999999999999997 2 237999999999999997642
Q ss_pred -CC---CCC------CCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCc-----cceecceeeeeeeeeccCCCCCCCCC
Q 010129 178 -QC---PSA------GSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQ-----SKSVDSRISFGCGRVQTGSFLDGAAP 242 (517)
Q Consensus 178 -~C---~~~------~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~-----~~~~~~~~~fG~~~~~~g~~~~~~~~ 242 (517)
.| .++ ++.|.|.+.|+.|++.+.|.+++|+|+|++.++. ..+.++++.|||++.+.+..+.....
T Consensus 76 ~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~ 155 (403)
T 3aup_A 76 HQCLSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNT 155 (403)
T ss_dssp CCEEECSSSCBTTBCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTC
T ss_pred cCccccCCCCCCCCCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCC
Confidence 22 221 2579999999337899999999999999864321 12678999999999875431122356
Q ss_pred ceeEeeCCCCCChhHHHhhcCCCCceeEEeeCC--CCCeeEEeCCCCCC------------CCceecceeCCCCCeEEEE
Q 010129 243 NGLFGLGMDKTSVPSILANQGLIPNSFSMCFGS--DGTGRISFGDKGSP------------GQGETPFSLRQTHPTYNIT 308 (517)
Q Consensus 243 dGilGLg~~~~S~~~ql~~~g~i~~~FS~~l~~--~~~G~L~fGg~d~~------------~~~~tp~~~~~~~~~y~v~ 308 (517)
+||||||+..+++++||++..+.+++||+||.+ +..|.|+||+ |+. .+.++|++..+ ..+|.|.
T Consensus 156 dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~-~~~y~v~ 233 (403)
T 3aup_A 156 QGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITL-QGEYNVR 233 (403)
T ss_dssp CEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECT-TSCEEEC
T ss_pred ceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccCC-CCcceEE
Confidence 899999999999999997655448999999998 4689999999 643 34567776653 3689999
Q ss_pred EeEEEeCCeee-ecc-----------CcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCC
Q 010129 309 ITQVSVGGNAV-NFE-----------FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQT 376 (517)
Q Consensus 309 l~~i~vg~~~~-~~~-----------~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~ 376 (517)
|++|+|+++.+ .++ ..+||||||++++||+++|++|.++|.+++........ ...+++||+.. ..
T Consensus 234 l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~-~~~~~~c~~c~--~~ 310 (403)
T 3aup_A 234 VNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKS-VAPFGLCFNSN--KI 310 (403)
T ss_dssp EEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECC-CTTCSCEECGG--GC
T ss_pred EEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCC-CCCCCceEECC--Cc
Confidence 99999999988 542 14999999999999999999999999877643221111 12345788653 21
Q ss_pred CCCCCeEEEEEcCC--ccEEEcCCeeEEEeCCCCeeEEEEEEEeCC----CceeechhhhceeEEEEeCCCCEEEE----
Q 010129 377 NFEYPVVNLTMKGG--GPFFVNDPIVIVSSEPKGLYLYCLGVVKSD----NVNIIGQNFMTGYNIVFDREKNVLGW---- 446 (517)
Q Consensus 377 ~~~~P~i~~~f~gg--~~~~l~~~~~~~~~~~~~~~~~Cl~~~~~~----~~~IlG~~fl~~~yvvfD~~~~~iGf---- 446 (517)
..+|+|+|+|.|+ ++++|++++|++...+ . .+|+++.... +.||||+.|||++|+|||++++||||
T Consensus 311 -~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~-~--~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGf~A~~ 386 (403)
T 3aup_A 311 -NAYPSVDLVMDKPNGPVWRISGEDLMVQAQP-G--VTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSS 386 (403)
T ss_dssp -CCCCCEEEEESSTTCCEEEECHHHHEEEC------CEEECEEECCSCCSSSEEECHHHHTTSCEEEETTTTEEEEESSC
T ss_pred -CcCCcEEEEEcCCCceEEEEcccceEEEcCC-C--eEEEEEEcCCCCCCCcEEEChHHhcCeEEEEECCCCEEEEeccc
Confidence 3789999999554 5999999888876543 2 5799877653 48999999999999999999999999
Q ss_pred ---EecCCCCCC
Q 010129 447 ---KASDCYGVN 455 (517)
Q Consensus 447 ---a~~~c~~~~ 455 (517)
++++|++..
T Consensus 387 ~~~~~~~C~~~~ 398 (403)
T 3aup_A 387 LHSHGVKCADLF 398 (403)
T ss_dssp GGGGTCCGGGSC
T ss_pred ccccCCCccccc
Confidence 677887654
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.7e-53 Score=431.83 Aligned_cols=301 Identities=23% Similarity=0.355 Sum_probs=241.1
Q ss_pred ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCC
Q 010129 99 NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQK 177 (517)
Q Consensus 99 ~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~ 177 (517)
.+.+..|+++|.||||+|+|.|++||||+++||+|. |..|..+ .++.|||++|+|++.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~---------~~~~y~~~~SsT~~~~----------- 70 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT---------GHAIYTPSKSSTSKKV----------- 70 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT---------TSCCBCGGGCTTCEEC-----------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC---------CCCcCCcccCcCceEc-----------
Confidence 356678999999999999999999999999999998 8776532 2388999999999986
Q ss_pred CCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCC---
Q 010129 178 QCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTS--- 254 (517)
Q Consensus 178 ~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S--- 254 (517)
+.|.|.+.| ++|+.+.|.+++|+|+|+ ...++++.|||++...+.+......+||||||+...+
T Consensus 71 ------~~~~~~i~Y-g~Gs~~~G~~~~D~v~ig------~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~ 137 (329)
T 3c9x_A 71 ------SGASWSISY-GDGSSSSGDVYTDKVTIG------GFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVR 137 (329)
T ss_dssp ------TTCBEEEEC-TTSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCB
T ss_pred ------CCCeEEEEe-CCCCcEEEEEEEEEEEEC------CEEEcceEEEEEEecCccccccCCCceeEEeCcccccccC
Confidence 368999999 788889999999999998 4578999999999877655433456899999997654
Q ss_pred ------hhHHHhhcCCC-CceeEEeeCCCCCeeEEeCCCCCC-CCceecceeCC-CCCeEEEEEeEEEeCCeeee-ccCc
Q 010129 255 ------VPSILANQGLI-PNSFSMCFGSDGTGRISFGDKGSP-GQGETPFSLRQ-THPTYNITITQVSVGGNAVN-FEFS 324 (517)
Q Consensus 255 ------~~~ql~~~g~i-~~~FS~~l~~~~~G~L~fGg~d~~-~~~~tp~~~~~-~~~~y~v~l~~i~vg~~~~~-~~~~ 324 (517)
+.++|+++ + +++||+||.++..|.|+||++|++ +.+.+.|++.. ...+|.|.|++|+|+++.+. .+..
T Consensus 138 ~~~~~~~~~~l~~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~ 215 (329)
T 3c9x_A 138 PHPQKTWFSNAASS--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRNSID 215 (329)
T ss_dssp SSCCCCHHHHHHTT--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSCCEE
T ss_pred CCCCCCHHHHHHHh--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCCCce
Confidence 56788875 6 899999999877899999999987 44444444443 45689999999999998775 3568
Q ss_pred EEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeEEEe
Q 010129 325 AIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSS 404 (517)
Q Consensus 325 ~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~ 404 (517)
+||||||++++||++++++|.+++...... .....+...|+ ..+|+|+|+| +|.+++||+++|++..
T Consensus 216 aiiDSGTt~~~lp~~~~~~i~~~i~~a~~~----~~~~~~~~~C~--------~~~P~i~f~f-~g~~~~ip~~~~~~~~ 282 (329)
T 3c9x_A 216 GIADTGTTLLLLDDNVVDAYYANVQSAQYD----NQQEGVVFDCD--------EDLPSFSFGV-GSSTITIPGDLLNLTP 282 (329)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTCTTCEEE----TTTTEEEEETT--------CCCCCEEEEE-TTEEEEECGGGGEEEE
T ss_pred EEEECCCCcEeCCHHHHHHHHHhCCCcEEc----CCCCEEEEECC--------CCCCcEEEEE-CCEEEEECHHHeeeec
Confidence 999999999999999999998887332111 01111223454 3689999999 7899999988877764
Q ss_pred CC-CCeeEEEEEE-EeC--CCceeechhhhceeEEEEeCCCCEEEEEec
Q 010129 405 EP-KGLYLYCLGV-VKS--DNVNIIGQNFMTGYNIVFDREKNVLGWKAS 449 (517)
Q Consensus 405 ~~-~~~~~~Cl~~-~~~--~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~ 449 (517)
.+ +. ..|++. ... .+.||||+.|||++|+|||++++|||||+.
T Consensus 283 ~~~~~--~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 283 LEEGS--STCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp SSTTC--SEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred cCCCC--CeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 32 22 579874 433 358999999999999999999999999973
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.9e-53 Score=430.23 Aligned_cols=299 Identities=20% Similarity=0.324 Sum_probs=239.3
Q ss_pred cCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCCC
Q 010129 100 SLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQ 178 (517)
Q Consensus 100 ~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~~ 178 (517)
+.+..|+++|.||||+|+|.|++||||+++||+|. |..|.. . ++.|||++|+|++.+
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-~---------~~~y~~~~SsT~~~~------------ 69 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-X---------QTIYTPSKSTTAKLL------------ 69 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC-----------CCCBCGGGCTTCEEE------------
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-c---------cCccCCccCccceec------------
Confidence 45678999999999999999999999999999998 877643 1 278999999999986
Q ss_pred CCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCC----
Q 010129 179 CPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTS---- 254 (517)
Q Consensus 179 C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S---- 254 (517)
+.|.|.+.| ++|+.+.|.+++|+|+|+ ...++++.|||++.+.+.+......+||||||+..++
T Consensus 70 -----~~~~~~i~Y-g~Gs~~~G~~~~D~v~~g------~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 137 (329)
T 1oew_A 70 -----SGATWSISY-GDGSSSSGDVYTDTVSVG------GLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSP 137 (329)
T ss_dssp -----EEEEEEEEC-TTSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBS
T ss_pred -----CCCeEEEEe-CCCCcEEEEEEEEEEEEC------CEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCc
Confidence 258899999 788889999999999998 4578999999999877655433456899999997654
Q ss_pred -----hhHHHhhcCCC-CceeEEeeCCCCCeeEEeCCCCCC-CCceecceeCC-CCCeEEEEEeEEEeCCeeee-ccCcE
Q 010129 255 -----VPSILANQGLI-PNSFSMCFGSDGTGRISFGDKGSP-GQGETPFSLRQ-THPTYNITITQVSVGGNAVN-FEFSA 325 (517)
Q Consensus 255 -----~~~ql~~~g~i-~~~FS~~l~~~~~G~L~fGg~d~~-~~~~tp~~~~~-~~~~y~v~l~~i~vg~~~~~-~~~~~ 325 (517)
+.++|+++ + +++||+||.++..|.|+|||+|++ +.+.+.|++.. ...+|.|.|++|+|+++.+. .+..+
T Consensus 138 ~~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~~a 215 (329)
T 1oew_A 138 TQQKTFFDNAKAS--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSIDG 215 (329)
T ss_dssp SCCCCHHHHHTTT--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEEEEEE
T ss_pred CCCCCHHHHHHHh--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCCCceE
Confidence 55788876 6 899999999877899999999987 44444444432 45689999999999998765 35689
Q ss_pred EEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeEEEeC
Q 010129 326 IFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSE 405 (517)
Q Consensus 326 iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~ 405 (517)
||||||++++||++++++|.+++...... .....+...|+ ..+|+|+|+| +|.+++||+++|++...
T Consensus 216 iiDSGTt~~~lP~~~~~~l~~~i~~a~~~----~~~g~~~~~C~--------~~~P~i~f~f-gg~~~~ip~~~~~~~~~ 282 (329)
T 1oew_A 216 IADTGTTLLYLPATVVSAYWAQVSGAKSS----SSVGGYVFPCS--------ATLPSFTFGV-GSARIVIPGDYIDFGPI 282 (329)
T ss_dssp EECTTCCSEEECHHHHHHHHTTSTTCEEE----TTTTEEEEETT--------CCCCCEEEEE-TTEEEEECHHHHEEEES
T ss_pred EEeCCCCCEECCHHHHHHHHHhCCCcEEc----CCCCEEEEECC--------CCCCcEEEEE-CCEEEEECHHHeeeeec
Confidence 99999999999999999998887332111 01111223454 3689999999 89999999887776543
Q ss_pred C-CCeeEEEEEEE-eC--CCceeechhhhceeEEEEeC-CCCEEEEEec
Q 010129 406 P-KGLYLYCLGVV-KS--DNVNIIGQNFMTGYNIVFDR-EKNVLGWKAS 449 (517)
Q Consensus 406 ~-~~~~~~Cl~~~-~~--~~~~IlG~~fl~~~yvvfD~-~~~~iGfa~~ 449 (517)
+ +. ..|++.+ .. .+.||||+.|||++|+|||+ +++|||||+.
T Consensus 283 ~~~~--~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 283 STGS--SSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp STTC--SEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred CCCC--CeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 2 22 5798744 33 35899999999999999999 9999999974
No 20
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.8e-53 Score=436.49 Aligned_cols=323 Identities=22% Similarity=0.327 Sum_probs=251.2
Q ss_pred cCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCCC
Q 010129 100 SLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQ 178 (517)
Q Consensus 100 ~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~~ 178 (517)
..+..|+++|.||||+|+|.|++||||+++||+|. |..|. +.|||++|+||+..
T Consensus 10 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~~-------------~~f~~~~SsT~~~~------------ 64 (383)
T 2ewy_A 10 DSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYID-------------TYFDTERSSTYRSK------------ 64 (383)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTBS-------------CCCCGGGCTTCEEE------------
T ss_pred CCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCccc-------------cCcccccCccceeC------------
Confidence 34567999999999999999999999999999998 54441 77999999999996
Q ss_pred CCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCC----
Q 010129 179 CPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTS---- 254 (517)
Q Consensus 179 C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S---- 254 (517)
+|.|.+.| ++|+ +.|.+++|+|+|++.. .....+.|+|.....+.+......+||||||+..++
T Consensus 65 ------~~~~~i~Y-g~Gs-~~G~~~~Dtv~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~ 132 (383)
T 2ewy_A 65 ------GFDVTVKY-TQGS-WTGFVGEDLVTIPKGF----NTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSS 132 (383)
T ss_dssp ------EEEEEEEC-SSCE-EEEEEEEEEEEETTTE----EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCT
T ss_pred ------CceEEEEE-CCcE-EEEEEEEEEEEECCCc----cceeEEEEEEEEeecceeeccCcCceEEecCchhcccccc
Confidence 68999999 6665 6899999999998531 112246789887766655444457999999998654
Q ss_pred ----hhHHHhhcCCCCceeEEeeCC---------CCCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeee
Q 010129 255 ----VPSILANQGLIPNSFSMCFGS---------DGTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVN 320 (517)
Q Consensus 255 ----~~~ql~~~g~i~~~FS~~l~~---------~~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~ 320 (517)
+..+|++|+.++++||+||.+ ...|.|+|||+|++ +.+.+.|++.....+|.|.|++|+|+++.+.
T Consensus 133 ~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~ 212 (383)
T 2ewy_A 133 SLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLN 212 (383)
T ss_dssp TSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECC
T ss_pred cccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEcc
Confidence 456888888778899999962 35799999999987 5555556655556789999999999999886
Q ss_pred cc------CcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCC-CCCcccccccCCCCCCCCCCeEEEEEcCC---
Q 010129 321 FE------FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTS-DLPFEYCYVLSPNQTNFEYPVVNLTMKGG--- 390 (517)
Q Consensus 321 ~~------~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~~~~P~i~~~f~gg--- 390 (517)
++ ..+||||||++++||+++|++|.+++.+........... ..+...|+.... .....+|+|+|+|.|+
T Consensus 213 ~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~-~~~~~~P~i~f~f~g~~~~ 291 (383)
T 2ewy_A 213 LDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNSE-TPWSYFPKISIYLRDENSS 291 (383)
T ss_dssp CCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSSS-CGGGGSCCEEEEEECSSTT
T ss_pred ccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCCc-ccHhhCCcEEEEECCCCCC
Confidence 52 479999999999999999999999998875422110000 013457987542 1224689999999554
Q ss_pred --ccEEEcCCeeEEEeCC--CCeeEEEEE--EEeCCCceeechhhhceeEEEEeCCCCEEEEEecCCCCCCCCccCCC
Q 010129 391 --GPFFVNDPIVIVSSEP--KGLYLYCLG--VVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPI 462 (517)
Q Consensus 391 --~~~~l~~~~~~~~~~~--~~~~~~Cl~--~~~~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~~~~~~~ 462 (517)
.+++|++++|+....+ +. ..|++ +....+.||||+.|||++|+|||++++|||||+++|....+++++++
T Consensus 292 ~~~~~~l~~~~yi~~~~~~~~~--~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i 367 (383)
T 2ewy_A 292 RSFRITILPQLYIQPMMGAGLN--YECYRFGISPSTNALVIGATVMEGFYVIFDRAQKRVGFAASPCAEIAGAAVSEI 367 (383)
T ss_dssp EEEEEEECHHHHEEEECCCTTC--SEEEEESEEEESSCEEECHHHHTTEEEEEETTTTEEEEEECTTCBSSSCBCEEE
T ss_pred ceEEEEEChHHheeecccCCCC--ceeEEEEecCCCCcEEEChHHhCCeeEEEECCCCeEEEEeccCCCcCCcceeee
Confidence 2688988877776531 22 46975 34445689999999999999999999999999999987777777776
No 21
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=2.9e-53 Score=444.46 Aligned_cols=302 Identities=21% Similarity=0.328 Sum_probs=243.2
Q ss_pred eeec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcc
Q 010129 95 TYRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTL 172 (517)
Q Consensus 95 ~~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~ 172 (517)
.+++ ++.+..|+++|.||||+|++.|++||||+++||+|. |. ...| ..++.|||++|+||+..
T Consensus 129 ~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~---~~~C------~~~~~ydps~SsT~~~~------ 193 (453)
T 2bju_A 129 NIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT---TAGC------LTKHLYDSSKSRTYEKD------ 193 (453)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC---STTG------GGSCCBCGGGCTTCEEE------
T ss_pred ceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC---cccc------CCCCcCCCccCCceeEC------
Confidence 4566 567889999999999999999999999999999998 64 2222 23488999999999986
Q ss_pred cCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeecc--CCCCCCCCCceeEeeCC
Q 010129 173 CELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQT--GSFLDGAAPNGLFGLGM 250 (517)
Q Consensus 173 C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~--g~~~~~~~~dGilGLg~ 250 (517)
+|.|.+.| ++|+ +.|.+++|+|+|++ ..++ +.|||++.+. |..+.....+||||||+
T Consensus 194 ------------~~~~~i~Y-gdGs-~~G~~~~Dtv~ig~------~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~ 252 (453)
T 2bju_A 194 ------------GTKVEMNY-VSGT-VSGFFSKDLVTVGN------LSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGW 252 (453)
T ss_dssp ------------EEEEEEEC-SSSE-EEEEEEEEEEEETT------EEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSC
T ss_pred ------------CcEEEEEc-CCCC-eEEEEEEEEEEEeC------cEEE-EEEEEEEEecccCccccccCCceeEeccC
Confidence 78999999 6666 89999999999983 5677 9999999887 65443345689999999
Q ss_pred CCC------ChhHHHhhcCCC-CceeEEeeCCC--CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeee
Q 010129 251 DKT------SVPSILANQGLI-PNSFSMCFGSD--GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVN 320 (517)
Q Consensus 251 ~~~------S~~~ql~~~g~i-~~~FS~~l~~~--~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~ 320 (517)
+.+ ++..+|+++|+| .++||+||.++ ..|.|+|||+|++ +.+.+.|++.....+|.|.++ |+|+++.+
T Consensus 253 ~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg~~~- 330 (453)
T 2bju_A 253 KDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGNIML- 330 (453)
T ss_dssp GGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETTEEE-
T ss_pred CcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECcEEe-
Confidence 764 466899999999 89999999984 5799999999987 444444444444578999999 99999443
Q ss_pred ccCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCC-CCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCe
Q 010129 321 FEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSD-LPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPI 399 (517)
Q Consensus 321 ~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~ 399 (517)
....+||||||++++||+++|++|.+++.+.. . ... .+...|+. ..+|+|+|+| +|.+++||+++
T Consensus 331 ~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~~~----~--~~g~~~~v~C~~-------~~~P~itf~f-gg~~~~l~~~~ 396 (453)
T 2bju_A 331 EKANCIVDSGTSAITVPTDFLNKMLQNLDVIK----V--PFLPFYVTLCNN-------SKLPTFEFTS-ENGKYTLEPEY 396 (453)
T ss_dssp EEEEEEECTTCCSEEECHHHHHHHTTTSSCEE----C--TTSSCEEEETTC-------TTCCCEEEEC-SSCEEEECHHH
T ss_pred ccccEEEcCCCCeEecCHHHHHHHHHHhCCcc----c--CCCceEEEecCC-------CCCCcEEEEE-CCEEEEECHHH
Confidence 45679999999999999999999988876531 1 111 23344543 4689999999 88999999988
Q ss_pred eEEEeCC-CCeeEEEEE-EEeCC---CceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 400 VIVSSEP-KGLYLYCLG-VVKSD---NVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 400 ~~~~~~~-~~~~~~Cl~-~~~~~---~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
|++.... +. ..|+. +...+ +.||||+.|||++|+|||++++|||||+++
T Consensus 397 yi~~~~~~g~--~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 397 YLQHIEDVGP--GLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp HEEECTTTST--TEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred hEeecccCCC--ceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 8887543 32 47974 55443 389999999999999999999999999986
No 22
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2.6e-52 Score=433.72 Aligned_cols=322 Identities=20% Similarity=0.293 Sum_probs=250.1
Q ss_pred CCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCCCC
Q 010129 101 LGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQC 179 (517)
Q Consensus 101 ~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~~C 179 (517)
.+..|+++|.||||+|+|.|++||||+++||+|. |..| ++.|||++|+||+..
T Consensus 19 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~-------------~~~y~~~~SsT~~~~------------- 72 (395)
T 2qp8_A 19 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL-------------HRYYQRQLSSTYRDL------------- 72 (395)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC-------------SCCCCGGGCTTCEEE-------------
T ss_pred CCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc-------------cCCcCcccCCCceeC-------------
Confidence 3567999999999999999999999999999998 5433 278999999999996
Q ss_pred CCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCC------
Q 010129 180 PSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKT------ 253 (517)
Q Consensus 180 ~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~------ 253 (517)
.|.|.+.| ++|+ +.|.+++|+|+|+... ... ..+.|++.....+.|......+||||||+..+
T Consensus 73 -----~~~~~i~Y-g~Gs-~~G~~~~Dtv~ig~g~---~~~-~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~ 141 (395)
T 2qp8_A 73 -----RKGVYVPY-TQGK-WEGELGTDLVSIPHGP---NVT-VRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDS 141 (395)
T ss_dssp -----EEEEEEEC-SSCE-EEEEEEEEEEECTTSC---SCE-EEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTT
T ss_pred -----CceEEEEE-CCcE-EEEEEEeEEEEECCCC---Cce-EEEEEEEEEccCcccccccCccceEEcCchhhccCCCC
Confidence 68999999 6665 5899999999997311 111 23678888776665543445799999999765
Q ss_pred --ChhHHHhhcCCCCceeEEeeCC------------CCCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCee
Q 010129 254 --SVPSILANQGLIPNSFSMCFGS------------DGTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNA 318 (517)
Q Consensus 254 --S~~~ql~~~g~i~~~FS~~l~~------------~~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~ 318 (517)
++..+|++|++|.++||+||.+ ...|.|+|||+|++ +.+.+.|++.....+|.|.|++|+|+++.
T Consensus 142 ~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~ 221 (395)
T 2qp8_A 142 LEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQD 221 (395)
T ss_dssp SCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEE
T ss_pred CCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEE
Confidence 4556999999888899999974 25799999999987 44555555555567899999999999998
Q ss_pred eecc------CcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCC-CCCcccccccCCCCCCCCCCeEEEEEcCCc
Q 010129 319 VNFE------FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTS-DLPFEYCYVLSPNQTNFEYPVVNLTMKGGG 391 (517)
Q Consensus 319 ~~~~------~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~ 391 (517)
+.++ ..+||||||++++||+++|++|.+++.+........... ..+...|+.... .....+|+|+|+|.|+.
T Consensus 222 ~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~-~~~~~~P~i~f~f~g~~ 300 (395)
T 2qp8_A 222 LKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT-TPWNIFPVISLYLMGEV 300 (395)
T ss_dssp CCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTC-CCGGGSCCEEEEEECSS
T ss_pred cccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCcccccccccccccccc-chHhhCCcEEEEEccCC
Confidence 7642 479999999999999999999999999875432110000 012357987642 22246999999995543
Q ss_pred -----cEEEcCCeeEEEeCC---CCeeEEEE--EEEeCCCceeechhhhceeEEEEeCCCCEEEEEecCCCCCCCCccCC
Q 010129 392 -----PFFVNDPIVIVSSEP---KGLYLYCL--GVVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALP 461 (517)
Q Consensus 392 -----~~~l~~~~~~~~~~~---~~~~~~Cl--~~~~~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~~~~~~ 461 (517)
+++|++++|+..... +. ..|+ ++....+.||||+.|||++|+|||++++|||||+++|.+..++++++
T Consensus 301 ~~~~~~~~l~p~~yi~~~~~~~~~~--~~C~~~~i~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~ 378 (395)
T 2qp8_A 301 TNQSFRITILPQQYLRPVEDVATSQ--DDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAA 378 (395)
T ss_dssp TTEEEEEEECHHHHEEEECCTTCCS--CEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCCCE
T ss_pred CCceEEEEECHHHhEeecccCCCCC--ceEEEEEecCCCCcEEEChHHhCCeeEEEECCCCEEEEEeccCCCCCCCccce
Confidence 688988887776432 22 4796 44444568999999999999999999999999999998766666666
Q ss_pred C
Q 010129 462 I 462 (517)
Q Consensus 462 ~ 462 (517)
+
T Consensus 379 i 379 (395)
T 2qp8_A 379 V 379 (395)
T ss_dssp E
T ss_pred e
Confidence 5
No 23
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=2e-52 Score=442.52 Aligned_cols=315 Identities=26% Similarity=0.404 Sum_probs=245.4
Q ss_pred ceeec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CC---CCCCCCCCCCCCcccCCCCCCCCCCCcccccC
Q 010129 94 DTYRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CV---SCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPC 168 (517)
Q Consensus 94 ~~~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~---~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C 168 (517)
..+++ ++.+..|+++|.||||+|+|.|++||||+++||+|. |. .|. .++.|||++|+||+..
T Consensus 42 ~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~~C~~~~~C~-----------~~~~y~~~~SsT~~~~-- 108 (478)
T 1qdm_A 42 DIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSAKCYFSIACY-----------LHSRYKAGASSTYKKN-- 108 (478)
T ss_dssp CSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCSCGGGG-----------GSCCBCGGGCTTCBCC--
T ss_pred ceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecCCCCCCcccc-----------CCCCCCcccCCCeeeC--
Confidence 34556 567789999999999999999999999999999998 64 343 3378999999999984
Q ss_pred CCcccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEee
Q 010129 169 NSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGL 248 (517)
Q Consensus 169 ~~~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGL 248 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ ...++++.|||++.+.+..+.....||||||
T Consensus 109 ----------------~~~~~i~Y-g~Gs-~~G~~~~Dtv~ig------~~~v~~~~Fg~a~~~~~~~f~~~~~dGIlGL 164 (478)
T 1qdm_A 109 ----------------GKPAAIQY-GTGS-IAGYFSEDSVTVG------DLVVKDQEFIEATKEPGITFLVAKFDGILGL 164 (478)
T ss_dssp ----------------CCEEEEEE-TTEE-EEEEEEEEEEEET------TEEEEEEEEEEEEECCBSHHHHCSSSEEEEC
T ss_pred ----------------CcEEEEEc-CCCC-eEEEEEEEEEEEC------CeEECCEEEEEEEecCCcccccccccceecc
Confidence 78999999 6665 8999999999998 4578899999999876643333456899999
Q ss_pred CCCCCCh------hHHHhhcCCC-CceeEEeeCCC----CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCC
Q 010129 249 GMDKTSV------PSILANQGLI-PNSFSMCFGSD----GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGG 316 (517)
Q Consensus 249 g~~~~S~------~~ql~~~g~i-~~~FS~~l~~~----~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~ 316 (517)
|+..+++ ..+|+++|+| .++||+||.++ ..|.|+|||+|++ +.+.+.|++....++|.|.+++|.|++
T Consensus 165 g~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i~v~g 244 (478)
T 1qdm_A 165 GFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDVLVGG 244 (478)
T ss_dssp SCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCEEETT
T ss_pred cccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEEEECC
Confidence 9988764 4689999999 89999999873 4799999999987 444555555444578999999999999
Q ss_pred eeeec---cCcEEEeccccceeecHHHHHHHHHHHHHhh----------------------hcc-c-----------cc-
Q 010129 317 NAVNF---EFSAIFDSGTSFTYLNDPAYTQISETFNSLA----------------------KEK-R-----------ET- 358 (517)
Q Consensus 317 ~~~~~---~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~----------------------~~~-~-----------~~- 358 (517)
+.+.+ ...+||||||++++||+++|++|.+++.+.. ... + ..
T Consensus 245 ~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC~~~~ 324 (478)
T 1qdm_A 245 KSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLCTFDG 324 (478)
T ss_dssp EECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC----
T ss_pred EEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhccccccccCc
Confidence 88764 4679999999999999999999999986431 000 0 00
Q ss_pred -----------CCC------C--------------------------------CCcccccccC---------CCCCCCCC
Q 010129 359 -----------STS------D--------------------------------LPFEYCYVLS---------PNQTNFEY 380 (517)
Q Consensus 359 -----------~~~------~--------------------------------~~~~~C~~~~---------~~~~~~~~ 380 (517)
.+. . ...+.|+..+ |+. ...+
T Consensus 325 ~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~-~~~l 403 (478)
T 1qdm_A 325 TRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGS-LGSM 403 (478)
T ss_dssp -----------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGG-GTTC
T ss_pred cccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeeccc-cccc
Confidence 000 0 0012354433 211 1478
Q ss_pred CeEEEEEcCCccEEEcCCeeEEEeCCC-CeeEEEEEE-EeC------CCceeechhhhceeEEEEeCCCCEEEEEec
Q 010129 381 PVVNLTMKGGGPFFVNDPIVIVSSEPK-GLYLYCLGV-VKS------DNVNIIGQNFMTGYNIVFDREKNVLGWKAS 449 (517)
Q Consensus 381 P~i~~~f~gg~~~~l~~~~~~~~~~~~-~~~~~Cl~~-~~~------~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~ 449 (517)
|+|+|+| +|+.|+|++++|++....+ . ..|++. ... .+.||||+.|||++|+|||++++|||||++
T Consensus 404 P~i~f~~-gg~~~~l~p~~yi~~~~~~~~--~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 404 PDIEFTI-GGKKFALKPEEYILKVGEGAA--AQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp CCEEEEE-TTEEEEECHHHHEEECSCGGG--CCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ccEEEEE-CCEEEEEChHHhEEEccCCCC--CeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeC
Confidence 9999999 8999999988888765432 2 469863 321 248999999999999999999999999986
No 24
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=9.5e-53 Score=433.24 Aligned_cols=301 Identities=20% Similarity=0.341 Sum_probs=245.9
Q ss_pred eeec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcc
Q 010129 95 TYRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTL 172 (517)
Q Consensus 95 ~~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~ 172 (517)
++++ ++.+..|+++|.||||+|+|.|++||||+++||+|. |. ...| ..++.|||++|+|++..
T Consensus 53 ~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~---~~~C------~~~~~y~~~~SsT~~~~------ 117 (375)
T 1miq_A 53 VIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN---SSGC------SIKNLYDSSKSKSYEKD------ 117 (375)
T ss_dssp CCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC---SSGG------GGSCCBCGGGCTTCEEE------
T ss_pred eEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC---cccc------cCCCcCCCccCCceEEC------
Confidence 4566 567789999999999999999999999999999998 64 2222 23488999999999986
Q ss_pred cCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeee----ccCCCCCCCCCceeEee
Q 010129 173 CELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRV----QTGSFLDGAAPNGLFGL 248 (517)
Q Consensus 173 C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~----~~g~~~~~~~~dGilGL 248 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ +..+++ .|||++. +. .| .....+|||||
T Consensus 118 ------------~~~~~i~Y-g~Gs-~~G~~~~Dtv~ig------~~~v~~-~Fg~~~~~~~~~~-~f-~~~~~dGilGL 174 (375)
T 1miq_A 118 ------------GTKVDITY-GSGT-VKGFFSKDLVTLG------HLSMPY-KFIEVTDTDDLEP-IY-SSVEFDGILGL 174 (375)
T ss_dssp ------------EEEEEEEE-TTEE-EEEEEEEEEEEET------TEEEEE-EEEEEEECGGGTT-HH-HHSCCCEEEEC
T ss_pred ------------CcEEEEEe-CCCe-EEEEEEEEEEEEc------CceECc-EEEEEEecccccc-cc-ccCCCceEEeC
Confidence 78999999 6665 8999999999998 456788 9999998 54 22 22346899999
Q ss_pred CCCCC------ChhHHHhhcCCC-CceeEEeeCCC--CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCee
Q 010129 249 GMDKT------SVPSILANQGLI-PNSFSMCFGSD--GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNA 318 (517)
Q Consensus 249 g~~~~------S~~~ql~~~g~i-~~~FS~~l~~~--~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~ 318 (517)
|+..+ ++..+|+++|+| .++||+||.++ ..|.|+|||+|++ +.+.+.|++.....+|.|.++ |+|+++.
T Consensus 175 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~ 253 (375)
T 1miq_A 175 GWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQT 253 (375)
T ss_dssp SSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEE
T ss_pred CCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEE
Confidence 99875 467899999999 89999999984 4799999999987 455556666556679999999 9999998
Q ss_pred eeccCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCC
Q 010129 319 VNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDP 398 (517)
Q Consensus 319 ~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~ 398 (517)
+ ....+||||||++++||+++|++|.+++.+.... ....+...|+. ..+|+|+|+| +|.+++||++
T Consensus 254 ~-~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~-----~~g~~~~~C~~-------~~~P~i~f~f-~g~~~~l~~~ 319 (375)
T 1miq_A 254 M-EKANVIVDSGTTTITAPSEFLNKFFANLNVIKVP-----FLPFYVTTCDN-------KEMPTLEFKS-ANNTYTLEPE 319 (375)
T ss_dssp E-EEEEEEECTTBSSEEECHHHHHHHHHHHTCEECT-----TSSCEEEETTC-------TTCCCEEEEC-SSCEEEECGG
T ss_pred c-ccceEEecCCCccEEcCHHHHHHHHHHhCCcccC-----CCCeEEEECCC-------CCCCcEEEEE-CCEEEEECHH
Confidence 8 5678999999999999999999999998764211 11223445654 4689999999 8899999999
Q ss_pred eeEEEeCC-CCeeEEEE-EEEeCC---CceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 399 IVIVSSEP-KGLYLYCL-GVVKSD---NVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 399 ~~~~~~~~-~~~~~~Cl-~~~~~~---~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+|++.... +. ..|+ ++.... +.||||+.|||++|+|||++++|||||+++
T Consensus 320 ~yi~~~~~~g~--~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 320 YYMNPILEVDD--TLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp GSEEESSSSSC--SEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred HhEeeccCCCC--CeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 88887542 22 4797 566554 589999999999999999999999999875
No 25
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1e-51 Score=436.64 Aligned_cols=324 Identities=19% Similarity=0.281 Sum_probs=254.8
Q ss_pred CCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCCCC
Q 010129 101 LGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQC 179 (517)
Q Consensus 101 ~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~~C 179 (517)
.+..|+++|.||||+|+|.|++||||+++||+|. | |. .++.|||++|+||+..
T Consensus 72 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~-----------~~~~y~~~~SsT~~~~------------- 125 (455)
T 3lpj_A 72 SGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF-----------LHRYYQRQLSSTYRDL------------- 125 (455)
T ss_dssp TTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT-----------CSCCCCGGGCTTCEEE-------------
T ss_pred CCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cc-----------cCCcccCCCCCCcccC-------------
Confidence 4568999999999999999999999999999998 4 32 2288999999999996
Q ss_pred CCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCC------
Q 010129 180 PSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKT------ 253 (517)
Q Consensus 180 ~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~------ 253 (517)
+|.|.+.| ++|+ +.|.+++|+|+|++.. ... ..+.|+|.+...+.+......+||||||+..+
T Consensus 126 -----~~~~~i~Y-g~Gs-~~G~~~~Dtv~ig~~~---~~~-~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~ 194 (455)
T 3lpj_A 126 -----RKGVYVPY-TQGK-WEGELGTDLVSIPHGP---NVT-VRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDS 194 (455)
T ss_dssp -----EEEEEEEC-SSCE-EEEEEEEEEEECTTSC---SCE-EEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTT
T ss_pred -----CccEEEEe-CCeE-EEEEEEEEEEEECCCc---cee-eEEEEEEEEccCcccccCCCcceEEEeCccccccccCC
Confidence 78999999 5665 5999999999998421 111 24678999888776655456799999999754
Q ss_pred --ChhHHHhhcCCCCceeEEeeCC------------CCCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCee
Q 010129 254 --SVPSILANQGLIPNSFSMCFGS------------DGTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNA 318 (517)
Q Consensus 254 --S~~~ql~~~g~i~~~FS~~l~~------------~~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~ 318 (517)
+++.+|+++++|.++||+||.+ ...|.|+||++|++ +.+.+.|++.....+|.|.+++|+|+++.
T Consensus 195 ~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~ 274 (455)
T 3lpj_A 195 LEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQD 274 (455)
T ss_dssp SCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEE
T ss_pred CCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEE
Confidence 4667999999998899999974 34799999999987 55666666666667899999999999998
Q ss_pred eecc------CcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCC-CCCcccccccCCCCCCCCCCeEEEEEcCCc
Q 010129 319 VNFE------FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTS-DLPFEYCYVLSPNQTNFEYPVVNLTMKGGG 391 (517)
Q Consensus 319 ~~~~------~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~ 391 (517)
+.++ ..+||||||++++||++++++|.+++.+........... ..+...|+.... .....+|+|+|+|.|+.
T Consensus 275 ~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~~-~~~~~~P~i~f~f~g~~ 353 (455)
T 3lpj_A 275 LKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT-TPWNIFPVISLYLMGEV 353 (455)
T ss_dssp CCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTTC-CCGGGSCCEEEEEECSS
T ss_pred ccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceecccccC-CchhcCCcEEEEEcCCC
Confidence 8753 469999999999999999999999999886422111000 113567987642 22346999999995443
Q ss_pred -----cEEEcCCeeEEEeCCCC-eeEEEEEE--EeCCCceeechhhhceeEEEEeCCCCEEEEEecCCCCCCCCccCCC
Q 010129 392 -----PFFVNDPIVIVSSEPKG-LYLYCLGV--VKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPI 462 (517)
Q Consensus 392 -----~~~l~~~~~~~~~~~~~-~~~~Cl~~--~~~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~~~~~~~ 462 (517)
+++|++++|++.....+ ....|+++ ....+.||||+.|||++|+|||++++|||||+++|....+++++++
T Consensus 354 ~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i 432 (455)
T 3lpj_A 354 TNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAV 432 (455)
T ss_dssp TTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHHHHTTEEEEEETTTTEEEEEEETTCCCCSSCCCEE
T ss_pred cCceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccccccccCccee
Confidence 48998888877654321 01369863 3345689999999999999999999999999999988776666666
No 26
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.8e-51 Score=428.42 Aligned_cols=323 Identities=20% Similarity=0.293 Sum_probs=251.5
Q ss_pred CceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCCCCC
Q 010129 102 GFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQCP 180 (517)
Q Consensus 102 ~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~~C~ 180 (517)
+..|+++|.||||+|+|.|++||||+++||+|. | |. .++.|||++|+||+..
T Consensus 27 ~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~-----------~~~~y~~~~SsT~~~~-------------- 79 (402)
T 3vf3_A 27 GQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF-----------LHRYYQRQLSSTYRDL-------------- 79 (402)
T ss_dssp TTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT-----------CSCCCCGGGCTTCEEE--------------
T ss_pred CCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc-----------ccCCcCcccCcccccC--------------
Confidence 457999999999999999999999999999998 5 32 2278999999999996
Q ss_pred CCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCC-------
Q 010129 181 SAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKT------- 253 (517)
Q Consensus 181 ~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~------- 253 (517)
+|.|.+.| ++|+ +.|.+++|+|+|++.. . ....+.|+|.....+.+......+||||||+..+
T Consensus 80 ----~~~~~i~Y-g~Gs-~~G~~~~D~v~ig~~~---~-~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~ 149 (402)
T 3vf3_A 80 ----RKGVYVPY-TQGK-WEGELGTDLVSIPHGP---N-VTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSL 149 (402)
T ss_dssp ----EEEEEEEC-SSCE-EEEEEEEEEEECTTSC---S-CEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTS
T ss_pred ----CCEEEEEE-CcEE-EEEEEEEEEEEECCcc---c-cceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcC
Confidence 78999999 5655 6999999999998421 1 1123568888877766655556799999999754
Q ss_pred -ChhHHHhhcCCCCceeEEeeCC------------CCCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeee
Q 010129 254 -SVPSILANQGLIPNSFSMCFGS------------DGTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAV 319 (517)
Q Consensus 254 -S~~~ql~~~g~i~~~FS~~l~~------------~~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~ 319 (517)
+++.+|+++++|.++||+||.+ ...|.|+|||+|++ +.+.+.|++.....+|.|.+++|+|+++.+
T Consensus 150 ~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~ 229 (402)
T 3vf3_A 150 EPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDL 229 (402)
T ss_dssp CCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEEC
T ss_pred CcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEe
Confidence 5667999999998899999963 23799999999987 556666666666678999999999999988
Q ss_pred ecc------CcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCC-CCCcccccccCCCCCCCCCCeEEEEEcCCc-
Q 010129 320 NFE------FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTS-DLPFEYCYVLSPNQTNFEYPVVNLTMKGGG- 391 (517)
Q Consensus 320 ~~~------~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~- 391 (517)
.++ ..+||||||++++||++++++|.+++.+........... ..+...|+.... .....+|+|+|+|.++.
T Consensus 230 ~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~~-~~~~~~P~i~f~f~g~~~ 308 (402)
T 3vf3_A 230 KMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAGT-TPWNIFPVISLYLMGEVT 308 (402)
T ss_dssp CCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETTC-CCGGGSCCEEEEEECSST
T ss_pred cccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCcccccccccccccccc-chHhhCCceEEEEecCCC
Confidence 753 469999999999999999999999999886422211110 112568987642 22347999999995443
Q ss_pred ----cEEEcCCeeEEEeCCCCe-eEEEEE--EEeCCCceeechhhhceeEEEEeCCCCEEEEEecCCCCCCCCccCCC
Q 010129 392 ----PFFVNDPIVIVSSEPKGL-YLYCLG--VVKSDNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVNNSSALPI 462 (517)
Q Consensus 392 ----~~~l~~~~~~~~~~~~~~-~~~Cl~--~~~~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~~~~~~~~ 462 (517)
+++|++++|++....... ...|++ +....+.||||+.|||++|+|||++++|||||+++|++..+.+++++
T Consensus 309 ~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i 386 (402)
T 3vf3_A 309 NQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAV 386 (402)
T ss_dssp TEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEESSCEEECHHHHTTEEEEEEGGGTEEEEEEETTCCBCSSCBCEE
T ss_pred CceEEEEECHHHheehhccCCCCCceEEEEeccCCCCcEEEChHHhCCeEEEEECCCCEEEEEecccCcccCcccccc
Confidence 489988888776443210 047985 33345689999999999999999999999999999998776666665
No 27
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=3.3e-51 Score=423.22 Aligned_cols=317 Identities=22% Similarity=0.408 Sum_probs=245.1
Q ss_pred ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCC--
Q 010129 99 NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQ-- 176 (517)
Q Consensus 99 ~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~-- 176 (517)
++.+.+|+++|.|||| |++||||+++||+|. .| .+++.++|+++.|...
T Consensus 10 ~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~--~~----------------------~~~~~~~C~s~~C~~~~~ 60 (381)
T 1t6e_X 10 DPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD--GG----------------------QPPAEIPCSSPTCLLANA 60 (381)
T ss_dssp CTTTCCEEEEEETTEE-----EEEETTCCCEEECCC--TT----------------------CCCCCCBTTSHHHHHHHS
T ss_pred cCCCcEEEEEEeCCCE-----EEEECCCCceEEeCC--CC----------------------CCCCccCCCCchhccccC
Confidence 4677899999999998 999999999999996 12 1245566777777531
Q ss_pred ---CCCCCC-------CCCC-ceeEEeCCCCCeEEEEEEEEEEEeccCCCccceeccee----eeeeeeeccCCCCCCCC
Q 010129 177 ---KQCPSA-------GSNC-PYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRI----SFGCGRVQTGSFLDGAA 241 (517)
Q Consensus 177 ---~~C~~~-------~~~~-~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~----~fG~~~~~~g~~~~~~~ 241 (517)
..|... ++.| .|.++| +||+.+.|++++|+|+|++.++ ...++++ .|||++.+.+..+ ...
T Consensus 61 ~~~~sc~~~~~~~~~~~~~c~~f~i~Y-gdGs~~~G~l~~Dtv~ig~~~g--~~~v~~~~~~~~Fg~~~~~~~~~~-~~~ 136 (381)
T 1t6e_X 61 YPAPGCPAPSCGSDKHDKPCTAYPYNP-VSGACAAGSLSHTRFVANTTDG--SKPVSKVNVGVLAACAPSKLLASL-PRG 136 (381)
T ss_dssp SCCTTCCCCCC------CBCEECCBCT-TTCCBCCEEEEEEEEEEEEESS--SSEEEEEEEEEEEEECCGGGGTTS-CTT
T ss_pred CCCCCCCCccCCcCcCCCccccccccc-cCCceeeEEEEEEEEEeeccCC--CccccceeeeeEeecCcccccCCC-CCC
Confidence 245432 2357 599999 7888889999999999985431 1234444 6799987632211 235
Q ss_pred CceeEeeCCCCCChhHHHhhcCCCCceeEEeeCCCCCeeEEeCCCCCC------CCceecceeCCCCCeEEEEEeEEEeC
Q 010129 242 PNGLFGLGMDKTSVPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSP------GQGETPFSLRQTHPTYNITITQVSVG 315 (517)
Q Consensus 242 ~dGilGLg~~~~S~~~ql~~~g~i~~~FS~~l~~~~~G~L~fGg~d~~------~~~~tp~~~~~~~~~y~v~l~~i~vg 315 (517)
.|||||||+..+|+++||+++++++++||+||.+...|.|+||+++.. .+.++|++..+..++|.|+|++|+||
T Consensus 137 ~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg 216 (381)
T 1t6e_X 137 STGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVG 216 (381)
T ss_dssp EEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEET
T ss_pred CceEEEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEc
Confidence 699999999999999999999866999999999867899999998752 56788887654445678999999999
Q ss_pred Ceeeecc------CcEEEeccccceeecHHHHHHHHHHHHHhhhcc-----cccC--CCCCCcccccccCCCC---CCCC
Q 010129 316 GNAVNFE------FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEK-----RETS--TSDLPFEYCYVLSPNQ---TNFE 379 (517)
Q Consensus 316 ~~~~~~~------~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~-----~~~~--~~~~~~~~C~~~~~~~---~~~~ 379 (517)
++.+.++ ..+||||||++++||+++|++|.++|.+++... .... .....++.||+.++.. ....
T Consensus 217 ~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~ 296 (381)
T 1t6e_X 217 DTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTKTLGNNLGGYA 296 (381)
T ss_dssp TEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGGGCCEETTEEC
T ss_pred CEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCCCCcccccCCc
Confidence 9988654 359999999999999999999999999887521 1100 1123567899876421 1136
Q ss_pred CCeEEEEEcCCccEEEcCCeeEEEeCCCCeeEEEEEEEeCC---------CceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 380 YPVVNLTMKGGGPFFVNDPIVIVSSEPKGLYLYCLGVVKSD---------NVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 380 ~P~i~~~f~gg~~~~l~~~~~~~~~~~~~~~~~Cl~~~~~~---------~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+|+|+|+|.||++++|++++|++...+ . .+|++++... +.||||+.|||++|+|||++++|||||++.
T Consensus 297 ~P~i~f~f~gg~~~~l~~~~y~~~~~~-~--~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA~~~ 373 (381)
T 1t6e_X 297 VPNVQLGLDGGSDWTMTGKNSMVDVKQ-G--TACVAFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFSRLP 373 (381)
T ss_dssp CCCEEEEETTSCEEEECHHHHEEEEET-T--EEEESEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEEECC
T ss_pred CCeEEEEECCCcEEEeCCCeEEEEcCC-C--eEEEEEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEeccc
Confidence 899999996679999999888876433 3 6799887653 479999999999999999999999999977
Q ss_pred C
Q 010129 451 C 451 (517)
Q Consensus 451 c 451 (517)
.
T Consensus 374 ~ 374 (381)
T 1t6e_X 374 H 374 (381)
T ss_dssp T
T ss_pred C
Confidence 5
No 28
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=6.9e-52 Score=434.63 Aligned_cols=301 Identities=20% Similarity=0.325 Sum_probs=246.4
Q ss_pred Cceeec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-C--CCCCCCCCCCCCCcccCCCCCCCCCCCcccccC
Q 010129 93 NDTYRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-C--VSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPC 168 (517)
Q Consensus 93 ~~~~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C--~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C 168 (517)
...+++ ++.+..|+++|.||||||++.|++||||+++||+|. | ..|. .++.|||++|+|++..
T Consensus 126 ~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~s~~C~-----------~~~~ydps~SsT~~~~-- 192 (451)
T 3qvc_A 126 FDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCTSESCE-----------SKNHYDSSKSKTYEKD-- 192 (451)
T ss_dssp -CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCCSGGGT-----------TSCCBCGGGCTTCEEE--
T ss_pred CCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCCccccC-----------CCCCCCCCCCcccccC--
Confidence 345666 677889999999999999999999999999999998 6 2343 2388999999999985
Q ss_pred CCcccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeee----ccCCCCCCCCCce
Q 010129 169 NSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRV----QTGSFLDGAAPNG 244 (517)
Q Consensus 169 ~~~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~----~~g~~~~~~~~dG 244 (517)
+|.|.+.| +||+ +.|.+++|+|+|+ +..++ +.|||++. ..+ + .....+|
T Consensus 193 ----------------~~~f~i~Y-gdGs-~~G~~~~Dtv~ig------g~~v~-~~Fg~a~~t~~~~~~-f-~~~~~dG 245 (451)
T 3qvc_A 193 ----------------DTPVKLTS-KAGT-ISGIFSKDLVTIG------KLSVP-YKFIEMTEIVGFEPF-Y-SESDVDG 245 (451)
T ss_dssp ----------------EEEEEEEC-SSEE-EEEEEEEEEEEET------TEEEE-EEEEEEEEEEECTTH-H-HHSCCCE
T ss_pred ----------------CCEEEEEE-CCCE-EEEEEEEEEEEEC------CEEEE-EEEEEEEeccccCCC-c-cCCCCCE
Confidence 78999999 6766 9999999999998 45678 99999998 655 3 2234689
Q ss_pred eEeeCCCCC------ChhHHHhhcCCC-CceeEEeeCCC--CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEe
Q 010129 245 LFGLGMDKT------SVPSILANQGLI-PNSFSMCFGSD--GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSV 314 (517)
Q Consensus 245 ilGLg~~~~------S~~~ql~~~g~i-~~~FS~~l~~~--~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~v 314 (517)
|||||++.. +++.+|+++|+| +++||+||.+. ..|.|+|||+|++ +.+.+.|++.....+|.|.++ |+|
T Consensus 246 ILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~V 324 (451)
T 3qvc_A 246 VFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHF 324 (451)
T ss_dssp EEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEE
T ss_pred EEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEE
Confidence 999999764 577899999999 99999999984 4799999999988 556666666666789999999 999
Q ss_pred CCeeeeccCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEE
Q 010129 315 GGNAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFF 394 (517)
Q Consensus 315 g~~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~ 394 (517)
+++ ......+||||||++++||++++++|.+++.+.... . ..+|.++|. ...+|+|+|+| +|.+++
T Consensus 325 gg~-~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a~~~~-----~-----~g~y~v~C~--~~~~P~itf~f-gg~~i~ 390 (451)
T 3qvc_A 325 GNV-SSKKANVILDSATSVITVPTEFFNQFVESASVFKVP-----F-----LSLYVTTCG--NTKLPTLEYRS-PNKVYT 390 (451)
T ss_dssp TTE-EEEEEEEEECTTBSSEEECHHHHHHHHTTTTCEECT-----T-----SSCEEEETT--CTTCCCEEEEE-TTEEEE
T ss_pred CCc-cCCCceEEEeCCCccccCCHHHHHHHHHHcCCeecC-----C-----CCeEEeeCC--cCcCCcEEEEE-CCEEEE
Confidence 998 445678999999999999999999999888654211 1 123444554 26789999999 899999
Q ss_pred EcCCeeEEEeCC-CCeeEEEEE-EEeCC---CceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 395 VNDPIVIVSSEP-KGLYLYCLG-VVKSD---NVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 395 l~~~~~~~~~~~-~~~~~~Cl~-~~~~~---~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
||+++|+..... +. ..|+. +...+ +.||||++|||++|+|||++++|||||+++
T Consensus 391 lp~~~yi~~~~~~~~--~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 391 LEPKQYLEPLENIFS--ALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp ECHHHHEEECTTTST--TEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EcHHHheeecccCCC--CeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 999888876542 22 46975 44433 489999999999999999999999999976
No 29
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.3e-51 Score=414.37 Aligned_cols=298 Identities=20% Similarity=0.343 Sum_probs=236.5
Q ss_pred cCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCCC
Q 010129 100 SLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQ 178 (517)
Q Consensus 100 ~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~~ 178 (517)
..+..|+++|.|| +|+|.|++||||+++||+|. |..|..+ .++.|||++|+ ++.
T Consensus 11 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~---------~~~~y~~~~Ss-~~~------------- 65 (325)
T 1ibq_A 11 NNDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQT---------GHDLYTPSSSA-TKL------------- 65 (325)
T ss_dssp TTTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHHT---------TSCCCBCCSSC-EEC-------------
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCccccC---------CCCCCCchhcC-Ccc-------------
Confidence 4567899999999 99999999999999999998 8766432 23889999998 543
Q ss_pred CCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCC----
Q 010129 179 CPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTS---- 254 (517)
Q Consensus 179 C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S---- 254 (517)
++|.|.+.| +||+.+.|.+++|+|+|+ ...++++.|||++...+.+......+||||||+..++
T Consensus 66 -----~~~~~~i~Y-g~Gs~~~G~~~~D~v~ig------~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p 133 (325)
T 1ibq_A 66 -----SGYSWDISY-GDGSSASGDVYRDTVTVG------GVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQP 133 (325)
T ss_dssp -----TTCBEEEEC-SSSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBS
T ss_pred -----CCCEEEEEe-CCCCEEEEEEEEeEEEEC------CEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCc
Confidence 379999999 788889999999999998 4578999999999887655543456899999997654
Q ss_pred -----hhHHHhhcCCCCceeEEeeCCCCCeeEEeCCCCCC-CCceecceeCC-CCCeEEEEEeEEEeCCeeee-ccCcEE
Q 010129 255 -----VPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSP-GQGETPFSLRQ-THPTYNITITQVSVGGNAVN-FEFSAI 326 (517)
Q Consensus 255 -----~~~ql~~~g~i~~~FS~~l~~~~~G~L~fGg~d~~-~~~~tp~~~~~-~~~~y~v~l~~i~vg~~~~~-~~~~~i 326 (517)
+.++|+++ +.+++||+||.++..|.|+|||+|++ +.+.+.|++.. ...+|.|.+++|+|+++.+. .+..+|
T Consensus 134 ~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~ai 212 (325)
T 1ibq_A 134 KAQTTFFDTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFSAI 212 (325)
T ss_dssp SCCCCHHHHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSCCEEEE
T ss_pred CCCCCHHHHHHHh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCCCceEE
Confidence 45788876 33899999999877899999999987 33444444432 45689999999999998775 346899
Q ss_pred EeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeEEEeCC
Q 010129 327 FDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEP 406 (517)
Q Consensus 327 iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~ 406 (517)
|||||++++||++++++|.+++...... .....+...|+ ..+|+|+|+| +|.+++||+++|++...+
T Consensus 213 iDSGTt~~~lP~~~~~~i~~~i~~a~~~----~~~g~~~~~C~--------~~~P~i~f~f-gg~~~~i~~~~~~~~~~~ 279 (325)
T 1ibq_A 213 ADTGTTLILLDDEIVSAYYEQVSGAQES----YEAGGYVFSCS--------TDLPDFTVVI-GDYKAVVPGKYINYAPVS 279 (325)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTTCBCC----SSSSSCEEETT--------CCCCCEEEEE-TTEEEEECHHHHEEEESS
T ss_pred EeCCCCcEeCCHHHHHHHHHhCCCceEc----CcCCeEEEEcC--------CCCCcEEEEE-CCEEEEECHHHhcccccC
Confidence 9999999999999999999887422111 11122233454 3689999999 899999998877765432
Q ss_pred -CCeeEEEEEEE-eC--CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 407 -KGLYLYCLGVV-KS--DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 407 -~~~~~~Cl~~~-~~--~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+. ..|++.+ .. .+.||||+.|||++|+|||++++|||||++.
T Consensus 280 ~~~--~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 280 TGS--STCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp TTC--SEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCC--CeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 32 4798744 33 3589999999999999999999999999863
No 30
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.8e-51 Score=417.16 Aligned_cols=297 Identities=18% Similarity=0.237 Sum_probs=241.0
Q ss_pred ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CC--CCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCC
Q 010129 99 NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CV--SCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCEL 175 (517)
Q Consensus 99 ~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~--~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~ 175 (517)
++.+..|+++|.|| +|+|.|++||||+++||+|. |. .|... .++.|||++| |++..
T Consensus 13 n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~C~~~---------~~~~y~~~~S-T~~~~--------- 71 (330)
T 1yg9_A 13 VFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECVGGACVCP---------NLQKYEKLKP-KYISD--------- 71 (330)
T ss_dssp EEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCCSGGGGST---------TCCCCCCSSC-EEEEE---------
T ss_pred cCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCCccCccc---------ccCccCCCCC-ceEEC---------
Confidence 45677899999999 99999999999999999998 75 46311 2378999999 99885
Q ss_pred CCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCC-
Q 010129 176 QKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTS- 254 (517)
Q Consensus 176 ~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S- 254 (517)
++.|.+.| ++|+ +.|.+++|+|+|+ ...++++.|||++.+ +..+.....+||||||+..++
T Consensus 72 ---------~~~~~i~Y-g~Gs-~~G~~~~Dtv~ig------~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~ 133 (330)
T 1yg9_A 72 ---------GNVQVKFF-DTGS-AVGRGIEDSLTIS------QLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPN 133 (330)
T ss_dssp ---------EEEEEEET-TTEE-EEEEEEEEEEEET------TEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCC
T ss_pred ---------CCEEEEEE-CCce-EEEEEEEEEEEEC------CEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhcc
Confidence 68999999 6665 4999999999998 457899999999987 332223356899999998776
Q ss_pred ------hhHHHhhcCCCCceeEEeeCCC--C--CeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeeee-cc
Q 010129 255 ------VPSILANQGLIPNSFSMCFGSD--G--TGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVN-FE 322 (517)
Q Consensus 255 ------~~~ql~~~g~i~~~FS~~l~~~--~--~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~-~~ 322 (517)
+.++|+++|+|+++||+||.+. . .|.|+|||+|++ +.+.+.|++.....+|.|.+++|+|+++.+. .+
T Consensus 134 ~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~ 213 (330)
T 1yg9_A 134 ALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVAPAG 213 (330)
T ss_dssp TTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEECTT
T ss_pred ccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEcCCC
Confidence 7789999998899999999874 2 799999999987 4556666666567799999999999998875 35
Q ss_pred CcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCC-cccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeE
Q 010129 323 FSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLP-FEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVI 401 (517)
Q Consensus 323 ~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~ 401 (517)
..+||||||++++||++++++|.+++++.... .+...+ ...|+.. ..+|+|+|+| +|.+++||+++|+
T Consensus 214 ~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~~~----~g~~~~~~~~C~~~------~~~p~i~f~f-gg~~~~l~~~~y~ 282 (330)
T 1yg9_A 214 TQAIIDTSKAIIVGPKAYVNPINEAIGCVVEK----TTTRRICKLDCSKI------PSLPDVTFVI-NGRNFNISSQYYI 282 (330)
T ss_dssp CEEEECTTCSSEEEEHHHHHHHHHHHTCEEEE----CSSCEEEEECGGGG------GGSCCEEEEE-TTEEEEECHHHHE
T ss_pred cEEEEecCCccccCCHHHHHHHHHHhCCcccC----CCceEEEEEECCCc------cccCcEEEEE-CCEEEEECHHHhc
Confidence 78999999999999999999999998654211 110012 2345543 4689999999 8999999998888
Q ss_pred EEeCCCCeeEEEEE-EEe--CCCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 402 VSSEPKGLYLYCLG-VVK--SDNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 402 ~~~~~~~~~~~Cl~-~~~--~~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+.. + ..|+. +.. ..+.||||+.|||++|+|||++++|||||+++
T Consensus 283 ~~~-~----~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 283 QQN-G----NLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEE-T----TEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ccC-C----CcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 765 2 46975 443 23589999999999999999999999999975
No 31
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=2.2e-51 Score=415.32 Aligned_cols=296 Identities=18% Similarity=0.328 Sum_probs=234.8
Q ss_pred cCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCCC
Q 010129 100 SLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQ 178 (517)
Q Consensus 100 ~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~~ 178 (517)
..+..|+++|.|| +|+|.|++||||+++||+|. |..|..+ .++.|||++|+ ++.
T Consensus 12 ~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c~---------~~~~y~~~~Ss-~~~------------- 66 (323)
T 1bxo_A 12 ANDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQS---------GHSVYNPSATG-KEL------------- 66 (323)
T ss_dssp GGGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT---------TSCCBCHHHHC-EEE-------------
T ss_pred CCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhcc---------CCCCCCcccCC-ccc-------------
Confidence 4567899999999 99999999999999999998 8766432 33889999998 654
Q ss_pred CCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCC----
Q 010129 179 CPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTS---- 254 (517)
Q Consensus 179 C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S---- 254 (517)
++|.|.+.| +||+.+.|.+++|+|+|+ ...++++.|||++.+.+.+......+||||||+..++
T Consensus 67 -----~~~~~~i~Y-g~Gs~~~G~~~~D~v~ig------~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~ 134 (323)
T 1bxo_A 67 -----SGYTWSISY-GDGSSASGNVFTDSVTVG------GVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQP 134 (323)
T ss_dssp -----EEEEEEEEC-TTSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBS
T ss_pred -----CCCeEEEEe-CCCCeEEEEEEEEEEEEC------CEEECcEEEEEEEecCcccccCCCCceEEEeCccccccccc
Confidence 268999999 788889999999999998 4578999999999887655443456899999997643
Q ss_pred -----hhHHHhhcCCC-CceeEEeeCCCCCeeEEeCCCCCC-CCceecceeCC-CCCeEEEEEeEEEeCCeeeeccCcEE
Q 010129 255 -----VPSILANQGLI-PNSFSMCFGSDGTGRISFGDKGSP-GQGETPFSLRQ-THPTYNITITQVSVGGNAVNFEFSAI 326 (517)
Q Consensus 255 -----~~~ql~~~g~i-~~~FS~~l~~~~~G~L~fGg~d~~-~~~~tp~~~~~-~~~~y~v~l~~i~vg~~~~~~~~~~i 326 (517)
+.++|+++ + +++||+||.++..|.|+|||+|++ +.+.+.|++.. ...+|.|.+++|+|++ ....+..+|
T Consensus 135 ~~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~~~ai 211 (323)
T 1bxo_A 135 QSQTTFFDTVKSS--LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS-QSGDGFSGI 211 (323)
T ss_dssp SCCCCHHHHHGGG--BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT-EEEEEEEEE
T ss_pred CCCCCHHHHHHHh--cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC-ccCCCceEE
Confidence 56788876 6 899999999877899999999987 34444444432 4568999999999999 444567899
Q ss_pred EeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeEEEeCC
Q 010129 327 FDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEP 406 (517)
Q Consensus 327 iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~ 406 (517)
|||||++++||++++++|.+++...... .....+...|+ ..+|+|+|+| +|.+++||+++|++...+
T Consensus 212 iDSGTs~~~lP~~~~~~l~~~i~~a~~~----~~~g~~~~~C~--------~~~P~i~f~f-gg~~~~l~~~~~~~~~~~ 278 (323)
T 1bxo_A 212 ADTGTTLLLLDDSVVSQYYSQVSGAQQD----SNAGGYVFDCS--------TNLPDFSVSI-SGYTATVPGSLINYGPSG 278 (323)
T ss_dssp ECTTCSSEEECHHHHHHHHTTSTTCEEE----TTTTEEEECTT--------CCCCCEEEEE-TTEEEEECHHHHEEEECS
T ss_pred EeCCCCceeCCHHHHHHHHHhCCCceEc----CcCCEEEEECC--------CCCceEEEEE-CCEEEEECHHHeEEeccC
Confidence 9999999999999999999887432111 01111223354 3689999999 899999998877766533
Q ss_pred CCeeEEEEEE-EeC--CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 407 KGLYLYCLGV-VKS--DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 407 ~~~~~~Cl~~-~~~--~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+. ..|++. ... .+.||||+.|||++|+|||++++|||||++.
T Consensus 279 ~~--~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 279 DG--STCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp SS--SCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CC--CeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 32 469874 443 3589999999999999999999999999863
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.1e-50 Score=410.13 Aligned_cols=296 Identities=20% Similarity=0.286 Sum_probs=234.9
Q ss_pred cCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCCCCC
Q 010129 100 SLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCELQKQ 178 (517)
Q Consensus 100 ~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~~~~ 178 (517)
..+..|+++|.|| +|+|.|++||||+++||+|. |..|..+ .++.|||++|+ ++.
T Consensus 12 ~~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~c~---------~~~~y~~~~Ss-~~~------------- 66 (323)
T 1izd_A 12 SNDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSERS---------GHDYYTPGSSA-QKI------------- 66 (323)
T ss_dssp GGGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHHT---------TCCCBCCCTTC-EEE-------------
T ss_pred CCCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccccc---------CCCCCCccccC-Ccc-------------
Confidence 3567899999999 89999999999999999998 8766422 23889999999 654
Q ss_pred CCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCC----
Q 010129 179 CPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTS---- 254 (517)
Q Consensus 179 C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S---- 254 (517)
++|.|.+.| +||+.+.|.+++|+|+|+ ...++++.|||++.+.+.+......+||||||+..++
T Consensus 67 -----~~~~~~i~Y-g~Gs~~~G~~~~D~v~ig------~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p 134 (323)
T 1izd_A 67 -----DGATWSISY-GDGSSASGDVYKDKVTVG------GVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQP 134 (323)
T ss_dssp -----EEEEEEEEC-TTSCEEEEEEEEEEEEET------TEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBS
T ss_pred -----CCCeEEEEc-CCCCeEEEEEEEEEEEEC------CEEECceEEEEEEeccccccccCCCceEEecCcccccccCC
Confidence 268999999 788889999999999998 4578999999999887655443456899999998654
Q ss_pred -----hhHHHhhcCCCCceeEEeeCCCCCeeEEeCCCCCC-CCceecceeCC-CCCeEEEEEeEEEeCCeeee-ccCcEE
Q 010129 255 -----VPSILANQGLIPNSFSMCFGSDGTGRISFGDKGSP-GQGETPFSLRQ-THPTYNITITQVSVGGNAVN-FEFSAI 326 (517)
Q Consensus 255 -----~~~ql~~~g~i~~~FS~~l~~~~~G~L~fGg~d~~-~~~~tp~~~~~-~~~~y~v~l~~i~vg~~~~~-~~~~~i 326 (517)
+.++|+++ +.+++||+||.++..|.|+|||+|++ +.+.+.|++.. ...+|.|.+++|+|++ .+. .+..+|
T Consensus 135 ~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~~~~ai 212 (323)
T 1izd_A 135 TPQKTFFDNVKSS-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSSSDSITGI 212 (323)
T ss_dssp SCCCCHHHHHGGG-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEECCCEEEE
T ss_pred CCCCCHHHHHHHh-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cccCCCceEE
Confidence 45788876 33899999999877899999999987 44555555543 4568999999999999 554 346899
Q ss_pred EeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeEEEeCC
Q 010129 327 FDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEP 406 (517)
Q Consensus 327 iDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~ 406 (517)
|||||++++||++++++|.+++...... .....+...|+ ..+|+|+|+| +|.+++||+++|++...+
T Consensus 213 iDSGTs~~~lp~~~~~~i~~~i~ga~~~----~~~g~~~~~C~--------~~~P~i~f~f-gg~~~~i~~~~~~~~~~~ 279 (323)
T 1izd_A 213 ADTGTTLLLLDDSIVDAYYEQVNGASYD----SSQGGYVFPSS--------ASLPDFSVTI-GDYTATVPGEYISFADVG 279 (323)
T ss_dssp ECTTCCSEEECHHHHHHHHTTSTTCEEE----TTTTEEEEETT--------CCCCCEEEEE-TTEEEEECHHHHEEEECS
T ss_pred EeCCCcceeCCHHHHHHHHHhCCCcEEc----CcCCEEEEECC--------CCCceEEEEE-CCEEEecCHHHeEEecCC
Confidence 9999999999999999998887422111 01011222353 3689999999 899999998877776533
Q ss_pred CCeeEEEEE-EEeC--CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 407 KGLYLYCLG-VVKS--DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 407 ~~~~~~Cl~-~~~~--~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
+ ..|++ +... .+.||||+.|||++|+|||++++|||||++.
T Consensus 280 ~---~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 280 N---GQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp T---TEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C---CeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 2 46987 4443 3589999999999999999999999999863
No 33
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.1e-50 Score=409.96 Aligned_cols=295 Identities=22% Similarity=0.328 Sum_probs=233.8
Q ss_pred eecccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecCCCCCCCCCCCCCCCcccCCCCCCCCCCCcccccCCCcccCC
Q 010129 96 YRLNSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCDCVSCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPCNSTLCEL 175 (517)
Q Consensus 96 ~~~~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~C~~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C~~~~C~~ 175 (517)
+++...+..|+++|.||||+|++.|++||||+++||+|. +.|||++|+++.
T Consensus 5 ~~l~n~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~------------------~~y~~s~Ss~~~----------- 55 (340)
T 1wkr_A 5 VPATNQLVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD------------------KSYVKTSTSSAT----------- 55 (340)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEEEETTCCCCEECSS------------------SCCCCCTTCEEE-----------
T ss_pred EeeeccCcEEEEEEEECCCCcEEEEEEeCCChhheecCC------------------CccCCcCCcccc-----------
Confidence 445333568999999999999999999999999999986 679998887543
Q ss_pred CCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCC--
Q 010129 176 QKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKT-- 253 (517)
Q Consensus 176 ~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~-- 253 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ ...++++.|||++.+.+ + . ..+||||||+..+
T Consensus 56 ---------~~~~~i~Y-g~Gs-~~G~~~~Dtv~~g------~~~v~~~~fg~~~~~~~-~-~--~~~GilGLg~~~~s~ 114 (340)
T 1wkr_A 56 ---------SDKVSVTY-GSGS-FSGTEYTDTVTLG------SLTIPKQSIGVASRDSG-F-D--GVDGILGVGPVDLTV 114 (340)
T ss_dssp ---------EEEEEEEC-SSCE-EEEEEEEEEEEET------TEEEEEEEEEEEEEEES-C-T--TCSEEEECSCGGGGT
T ss_pred ---------CceEEEEE-CCcE-EEEEEEEEEEEEC------CEEEcceEEEEEEccCC-C-c--CCCcEEECCcccccc
Confidence 48899999 6765 8999999999998 46789999999999876 3 2 4689999999764
Q ss_pred ------------ChhHHHhhcCCC-CceeEEeeCCC-----CCeeEEeCCCCCC-C---CceecceeCCC-CCeEEEEEe
Q 010129 254 ------------SVPSILANQGLI-PNSFSMCFGSD-----GTGRISFGDKGSP-G---QGETPFSLRQT-HPTYNITIT 310 (517)
Q Consensus 254 ------------S~~~ql~~~g~i-~~~FS~~l~~~-----~~G~L~fGg~d~~-~---~~~tp~~~~~~-~~~y~v~l~ 310 (517)
+++.+|+++|+| +++||+||.+. ..|.|+||++|++ + +.++|++.... ..+|.|. +
T Consensus 115 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~ 193 (340)
T 1wkr_A 115 GTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-Q 193 (340)
T ss_dssp TSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-E
T ss_pred ccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-e
Confidence 456789999999 89999999862 3699999999986 3 44555544321 4689999 9
Q ss_pred EEEeCC-eeeeccCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCCCcccccccCCCCCCCCCCeEEEEEcC
Q 010129 311 QVSVGG-NAVNFEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDLPFEYCYVLSPNQTNFEYPVVNLTMKG 389 (517)
Q Consensus 311 ~i~vg~-~~~~~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~P~i~~~f~g 389 (517)
+|+|++ +.+..+..+||||||++++||+++|++|.+++++..... ...+...|... ..+|+|+|+| +
T Consensus 194 ~i~v~~~~~l~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~~~~-----~g~~~~~C~~~------~~~p~i~f~f-~ 261 (340)
T 1wkr_A 194 SIRYGSSTSILSSTAGIVDTGTTLTLIASDAFAKYKKATGAVADNN-----TGLLRLTTAQY------ANLQSLFFTI-G 261 (340)
T ss_dssp EEEETTTEEEEEEEEEEECTTBCSEEECHHHHHHHHHHHTCEECTT-----TSSEEECHHHH------HTCCCEEEEE-T
T ss_pred eEEECCCeEccCCCeEEEeCCcccccCCHHHHHHHHHhhCCEEcCC-----CCeEEeecccc------ccCCcEEEEE-C
Confidence 999998 888766789999999999999999999988887553211 11223345433 4689999999 8
Q ss_pred CccEEEcCCeeEEEeCC------CCeeEEEE-EEEe--C----CCceeechhhhceeEEEEeCCCCEEEEEecCCCCCC
Q 010129 390 GGPFFVNDPIVIVSSEP------KGLYLYCL-GVVK--S----DNVNIIGQNFMTGYNIVFDREKNVLGWKASDCYGVN 455 (517)
Q Consensus 390 g~~~~l~~~~~~~~~~~------~~~~~~Cl-~~~~--~----~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~c~~~~ 455 (517)
|.++.|+++.|++.... .. ..|+ .+.. . ...||||+.|||++|+|||++++|||||+++|++.+
T Consensus 262 g~~~~i~~~~yi~~~~~~~~~g~~~--~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 262 GQTFELTANAQIWPRNLNTAIGGSA--SSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp TEEEEECTGGGBCCGGGGGGGTCCS--SCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred CEEEEEcHHHhccccccccccCCCC--ceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 89999998877765321 11 3474 3433 1 136999999999999999999999999999997643
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=8e-42 Score=330.33 Aligned_cols=221 Identities=24% Similarity=0.410 Sum_probs=183.5
Q ss_pred Cceeec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CC---CCCCCCCCCCCCcccCCCCCCCCCCCccccc
Q 010129 93 NDTYRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CV---SCVHGLNSSSGQVIDFNIYSPNTSSTSSKVP 167 (517)
Q Consensus 93 ~~~~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~---~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~ 167 (517)
+..+++ ++.+..|+++|.||||+|+|.|++||||+++||+|. |. .|.. ++.|||++|+||+..
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~-----------~~~y~~~~SsT~~~~- 69 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRA-----------HSMYESSDSSTYKEN- 69 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHT-----------SCCBCGGGCTTCEEE-
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCC-----------CCCCCCccCCCeeeC-
Confidence 345666 677889999999999999999999999999999998 75 3543 378999999999985
Q ss_pred CCCcccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEeccCCCccceecceeeeeeeeeccCCCCCCCCCceeEe
Q 010129 168 CNSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLATDEKQSKSVDSRISFGCGRVQTGSFLDGAAPNGLFG 247 (517)
Q Consensus 168 C~~~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~~~~~~~~~~~~~~fG~~~~~~g~~~~~~~~dGilG 247 (517)
+|.|.+.| ++|+ +.|.+++|+|+|+ ...++++.|||++...+..+.....+||||
T Consensus 70 -----------------~~~~~i~Y-g~Gs-~~G~~~~D~v~~g------~~~v~~~~fg~~~~~~~~~f~~~~~~GilG 124 (239)
T 1b5f_A 70 -----------------GTFGAIIY-GTGS-ITGFFSQDSVTIG------DLVVKEQDFIEATDEADNVFLHRLFDGILG 124 (239)
T ss_dssp -----------------EEEEEEEC-SSCE-EEEEEEEEEEEET------TEEEEEEEEEEEEEECHHHHTTCSCCEEEE
T ss_pred -----------------CcEEEEEE-CCCc-EEEEEEEEEEEEC------CcEEccEEEEEEEeccCccccccCcceEEe
Confidence 68899999 6665 7999999999998 457889999999987653333345689999
Q ss_pred eCCCCCC--hhHHHhhcCCC-CceeEEeeCCC----CCeeEEeCCCCCC-CCceecceeCCCCCeEEEEEeEEEeCCeee
Q 010129 248 LGMDKTS--VPSILANQGLI-PNSFSMCFGSD----GTGRISFGDKGSP-GQGETPFSLRQTHPTYNITITQVSVGGNAV 319 (517)
Q Consensus 248 Lg~~~~S--~~~ql~~~g~i-~~~FS~~l~~~----~~G~L~fGg~d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~ 319 (517)
||+..++ +..+|+++|+| +++||+||.+. ..|.|+||++|++ +.+.+.|++.....+|.|.|++|+|+++.+
T Consensus 125 Lg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~ 204 (239)
T 1b5f_A 125 LSFQTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKST 204 (239)
T ss_dssp CSCCSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEEC
T ss_pred cCccccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEe
Confidence 9999887 44679999999 89999999872 4799999999987 334444444444568999999999999987
Q ss_pred ec---cCcEEEeccccceeecHHHHHHHHHHHHH
Q 010129 320 NF---EFSAIFDSGTSFTYLNDPAYTQISETFNS 350 (517)
Q Consensus 320 ~~---~~~~iiDSGTt~~~lp~~~~~~l~~~~~~ 350 (517)
.+ ...+||||||++++||+++|++|.+++++
T Consensus 205 ~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~iga 238 (239)
T 1b5f_A 205 GFCAPGCQAFADSGTSLLSGPTAIVTQINHAIGA 238 (239)
T ss_dssp CTTTTCEEEEECTTCSSEEECHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEecCcchhhCCHHHHHHHHHHhCC
Confidence 64 35799999999999999999999998764
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.4e-35 Score=287.18 Aligned_cols=218 Identities=22% Similarity=0.321 Sum_probs=177.0
Q ss_pred ceecceeeeeeeeeccCCCCCCCCCceeEeeCCCCCC------hhHHHhhcCCC-CceeEEeeCCC--C--CeeEEeCCC
Q 010129 218 KSVDSRISFGCGRVQTGSFLDGAAPNGLFGLGMDKTS------VPSILANQGLI-PNSFSMCFGSD--G--TGRISFGDK 286 (517)
Q Consensus 218 ~~~~~~~~fG~~~~~~g~~~~~~~~dGilGLg~~~~S------~~~ql~~~g~i-~~~FS~~l~~~--~--~G~L~fGg~ 286 (517)
++.++++.|||++.+.+.++.....+||||||+..++ +..+|+++|+| +++||+||.+. . .|.|+||++
T Consensus 2 g~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~ 81 (241)
T 1lya_B 2 GVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGT 81 (241)
T ss_dssp CEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSC
T ss_pred CeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCc
Confidence 4678999999999988765555567999999998654 56799999999 89999999983 2 799999999
Q ss_pred CCC-CCceecceeCCCCCeEEEEEeEEEeCCeeee--ccCcEEEeccccceeecHHHHHHHHHHHHHhhhcccccCCCCC
Q 010129 287 GSP-GQGETPFSLRQTHPTYNITITQVSVGGNAVN--FEFSAIFDSGTSFTYLNDPAYTQISETFNSLAKEKRETSTSDL 363 (517)
Q Consensus 287 d~~-~~~~tp~~~~~~~~~y~v~l~~i~vg~~~~~--~~~~~iiDSGTt~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~ 363 (517)
|++ +.+.+.|++.....+|.|.+++|+|+++.+. .+..+||||||+++++|++++++|.+++.+.... . ..
T Consensus 82 d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~-----~-g~ 155 (241)
T 1lya_B 82 DSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLI-----Q-GE 155 (241)
T ss_dssp CGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEEEE-----T-TE
T ss_pred CHHHcCCceEEEECccccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCeecc-----C-Cc
Confidence 987 5566666666666789999999999998753 3467999999999999999999999998654321 1 22
Q ss_pred CcccccccCCCCCCCCCCeEEEEEcCCccEEEcCCeeEEEeCC-CCeeEEEEE-EEeC------CCceeechhhhceeEE
Q 010129 364 PFEYCYVLSPNQTNFEYPVVNLTMKGGGPFFVNDPIVIVSSEP-KGLYLYCLG-VVKS------DNVNIIGQNFMTGYNI 435 (517)
Q Consensus 364 ~~~~C~~~~~~~~~~~~P~i~~~f~gg~~~~l~~~~~~~~~~~-~~~~~~Cl~-~~~~------~~~~IlG~~fl~~~yv 435 (517)
+...|+.. ..+|+|+|+| +|.+++||+++|++.... +. ..|+. +... .+.||||+.|||++|+
T Consensus 156 ~~~~C~~~------~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~--~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~ 226 (241)
T 1lya_B 156 YMIPCEKV------STLPAITLKL-GGKGYKLSPEDYTLKVSQAGK--TLCLSGFMGMDIPPPSGPLWILGDVFIGRYYT 226 (241)
T ss_dssp EEEEGGGG------GGSCCEEEEE-TTEEEEECTTTSEEEETTTTS--SEEEESEEECCCCTTTCCCEEECHHHHTTEEE
T ss_pred EEEECCCC------ccCCeEEEEE-CCEEEEECHHHhEEEccCCCC--CeeEEEEEecccCCCCCCeEEechHHhcceEE
Confidence 34457654 4789999999 899999999988876543 22 47975 5543 3589999999999999
Q ss_pred EEeCCCCEEEEEecC
Q 010129 436 VFDREKNVLGWKASD 450 (517)
Q Consensus 436 vfD~~~~~iGfa~~~ 450 (517)
|||++++|||||+++
T Consensus 227 vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 227 VFDRDNNRVGFAEAA 241 (241)
T ss_dssp EEETTTTEEEEEEEC
T ss_pred EEECCCCEEEEEEcC
Confidence 999999999999874
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.86 E-value=4.5e-22 Score=163.42 Aligned_cols=87 Identities=29% Similarity=0.599 Sum_probs=75.6
Q ss_pred eeec-ccCCceEEEEEEecCCCeEEEEEEeCCCCceeEecC-CC----CCCCCCCCCCCCcccCCCCCCCCCCCcccccC
Q 010129 95 TYRL-NSLGFLHYTNVSVGQPALSFIVALDTGSDLFWLPCD-CV----SCVHGLNSSSGQVIDFNIYSPNTSSTSSKVPC 168 (517)
Q Consensus 95 ~~~~-~~~~~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~-C~----~C~~~~~~~~~~~~~~~~ydp~~SsT~~~~~C 168 (517)
.+++ ++.+..|+++|.||||+|+|.|++||||+++||+|. |. .|.. ++.|||++|+|++..
T Consensus 4 ~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~-----------~~~y~p~~SsT~~~~-- 70 (97)
T 1lya_A 4 PEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWI-----------HHKYNSDKSSTYVKN-- 70 (97)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHT-----------SCCBCGGGCTTCEEE--
T ss_pred eEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCC-----------CCCCCchhCCCceeC--
Confidence 3455 567889999999999999999999999999999998 65 4543 388999999999996
Q ss_pred CCcccCCCCCCCCCCCCCceeEEeCCCCCeEEEEEEEEEEEecc
Q 010129 169 NSTLCELQKQCPSAGSNCPYQVRYLSDGTMSTGFLVEDVLHLAT 212 (517)
Q Consensus 169 ~~~~C~~~~~C~~~~~~~~~~~~Yg~dg~~~~G~~~~Dtl~~~~ 212 (517)
.|.|.+.| ++|+ +.|.+++|+|+|++
T Consensus 71 ----------------~~~~~i~Y-g~Gs-~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 ----------------GTSFDIHY-GSGS-LSGYLSQDTVSVPC 96 (97)
T ss_dssp ----------------EEEEEEEC-SSCE-EEEEEEEEEEEESC
T ss_pred ----------------CCcEEEEE-CCcE-EEEEEEEEEEEECC
Confidence 78999999 6766 89999999999974
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.48 E-value=4.5e-14 Score=113.43 Aligned_cols=70 Identities=24% Similarity=0.441 Sum_probs=57.5
Q ss_pred CCCCeEEEEEcCCccEEEcCCeeEEEeCC-CCeeEEEEE-EEeC-----CCceeechhhhceeEEEEeCCCCEEEEEecC
Q 010129 378 FEYPVVNLTMKGGGPFFVNDPIVIVSSEP-KGLYLYCLG-VVKS-----DNVNIIGQNFMTGYNIVFDREKNVLGWKASD 450 (517)
Q Consensus 378 ~~~P~i~~~f~gg~~~~l~~~~~~~~~~~-~~~~~~Cl~-~~~~-----~~~~IlG~~fl~~~yvvfD~~~~~iGfa~~~ 450 (517)
..+|+|+|+| +|.+++|++++|++.... +. ..|++ +... .+.||||+.|||++|+|||++++|||||+++
T Consensus 11 ~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~--~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA~~~ 87 (87)
T 1b5f_B 11 SSMPNVSFTI-GGKKFGLTPEQYILKVGKGEA--TQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFAEAA 87 (87)
T ss_dssp GGCCCEEEEE-TTEEEEECHHHHEEEESCTTT--CEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CcCCcEEEEE-CCEEEEECHHHhEEEccCCCC--CEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEEEcC
Confidence 4789999999 899999998888776442 22 47975 4432 3489999999999999999999999999864
No 38
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.28 E-value=0.54 Score=40.36 Aligned_cols=26 Identities=23% Similarity=0.250 Sum_probs=24.6
Q ss_pred ceeechhhhceeEEEEeCCCCEEEEE
Q 010129 422 VNIIGQNFMTGYNIVFDREKNVLGWK 447 (517)
Q Consensus 422 ~~IlG~~fl~~~yvvfD~~~~~iGfa 447 (517)
..|||..||+++-+..|+++++|-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 58999999999999999999999996
No 39
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=90.83 E-value=0.31 Score=42.13 Aligned_cols=28 Identities=21% Similarity=0.267 Sum_probs=25.6
Q ss_pred ceeechhhhceeEEEEeCCCCEEEEEec
Q 010129 422 VNIIGQNFMTGYNIVFDREKNVLGWKAS 449 (517)
Q Consensus 422 ~~IlG~~fl~~~yvvfD~~~~~iGfa~~ 449 (517)
..|||..||+.+-.+.|++++++-|.+.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~~~ 135 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIGTT 135 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECTTT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEccC
Confidence 5799999999999999999999999764
No 40
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=90.33 E-value=0.41 Score=41.14 Aligned_cols=30 Identities=17% Similarity=0.285 Sum_probs=26.3
Q ss_pred ceEEEEEEecCCCeEEEEEEeCCCCceeEecC
Q 010129 103 FLHYTNVSVGQPALSFIVALDTGSDLFWLPCD 134 (517)
Q Consensus 103 ~~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~ 134 (517)
..+++++.|+ ++++.+++|||++.+-+...
T Consensus 25 ~~~~v~v~In--G~~~~~LvDTGAs~s~is~~ 54 (148)
T 2i1a_A 25 PMLYINIEIN--NYPVKAFVDTGAQTTIMSTR 54 (148)
T ss_dssp CCCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred ceEEEEEEEC--CEEEEEEEECCCCccccCHH
Confidence 3578999998 89999999999999988754
No 41
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=84.67 E-value=0.97 Score=36.44 Aligned_cols=27 Identities=33% Similarity=0.276 Sum_probs=24.2
Q ss_pred EEEEEEecCCCeEEEEEEeCCCCceeEec
Q 010129 105 HYTNVSVGQPALSFIVALDTGSDLFWLPC 133 (517)
Q Consensus 105 Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~ 133 (517)
-++.|.|| +|.+.+++|||.|++-+..
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEcc
Confidence 35789999 9999999999999999984
No 42
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=84.37 E-value=1 Score=35.87 Aligned_cols=27 Identities=22% Similarity=0.187 Sum_probs=24.2
Q ss_pred EEEEEecCCCeEEEEEEeCCCCceeEecC
Q 010129 106 YTNVSVGQPALSFIVALDTGSDLFWLPCD 134 (517)
Q Consensus 106 ~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~ 134 (517)
+++|.|| .|.+.+++|||.|++-+...
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~~ 36 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEEM 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESCC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEecc
Confidence 4789999 99999999999999998754
No 43
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=80.43 E-value=1.7 Score=34.59 Aligned_cols=27 Identities=22% Similarity=0.127 Sum_probs=24.0
Q ss_pred EEEEEecCCCeEEEEEEeCCCCceeEecC
Q 010129 106 YTNVSVGQPALSFIVALDTGSDLFWLPCD 134 (517)
Q Consensus 106 ~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~ 134 (517)
+++|.|| +|.+.+++|||.|++-+...
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~~ 36 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAGI 36 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESSC
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcCc
Confidence 4789999 99999999999999988653
No 44
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=76.05 E-value=2.7 Score=34.15 Aligned_cols=28 Identities=25% Similarity=0.366 Sum_probs=24.2
Q ss_pred EEEEec---CCCeEEEEEEeCCCCceeEecC
Q 010129 107 TNVSVG---QPALSFIVALDTGSDLFWLPCD 134 (517)
Q Consensus 107 ~~v~vG---TP~Q~~~v~vDTGS~~~Wv~~~ 134 (517)
++|.|| +|+|.+..++|||-|++-+...
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~~~ 43 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIPIA 43 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEEGG
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEecc
Confidence 566666 8899999999999999999875
No 45
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=75.45 E-value=2.7 Score=34.49 Aligned_cols=26 Identities=27% Similarity=0.296 Sum_probs=23.2
Q ss_pred EEEEEecCCCeEEEEEEeCCCCceeEecC
Q 010129 106 YTNVSVGQPALSFIVALDTGSDLFWLPCD 134 (517)
Q Consensus 106 ~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~ 134 (517)
++ |.|| +|.+.+++|||.|++-+...
T Consensus 16 ~v-ikI~--Gq~~eaLLDTGAD~TVi~~~ 41 (116)
T 2hah_A 16 IL-IFVN--GYPIKFLLDTGADITVLNRR 41 (116)
T ss_dssp EE-EEET--TEEEEEEECTTCSSCEEEGG
T ss_pred EE-EEEC--CEEEEEEecCCCCcEEEccc
Confidence 46 9999 99999999999999999764
No 46
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=69.12 E-value=5.2 Score=32.59 Aligned_cols=27 Identities=15% Similarity=0.210 Sum_probs=24.2
Q ss_pred EEEEEecCCCeEEEEEEeCCCCceeEecC
Q 010129 106 YTNVSVGQPALSFIVALDTGSDLFWLPCD 134 (517)
Q Consensus 106 ~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~ 134 (517)
.+.+.|| +|.+.+++|||-|++-+...
T Consensus 11 ~vti~I~--Gq~~eaLLDTGADdTVi~~~ 37 (114)
T 3sqf_A 11 SLTLWLD--DKMFTGLINTGADVTIIKLE 37 (114)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEEEGG
T ss_pred eEEEEEC--CEEEEEEEccCCCceEEecc
Confidence 3788999 99999999999999999865
No 47
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=65.84 E-value=5.2 Score=34.30 Aligned_cols=29 Identities=17% Similarity=0.328 Sum_probs=26.4
Q ss_pred eEEEEEEecCCCeEEEEEEeCCCCceeEecC
Q 010129 104 LHYTNVSVGQPALSFIVALDTGSDLFWLPCD 134 (517)
Q Consensus 104 ~Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~ 134 (517)
.||+++.|. .+++.+++|||++.+.+...
T Consensus 24 ~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 24 MLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred EEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 578999998 99999999999999999875
No 48
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=54.60 E-value=12 Score=31.34 Aligned_cols=28 Identities=21% Similarity=0.249 Sum_probs=24.2
Q ss_pred EEEEEEecCCCeEEEEEEeCCCCceeEecC
Q 010129 105 HYTNVSVGQPALSFIVALDTGSDLFWLPCD 134 (517)
Q Consensus 105 Y~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~~ 134 (517)
-++.+.|+ +|.+.+++|||.+++-+...
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQN 50 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECSC
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEccc
Confidence 34789999 89999999999999988753
No 49
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=53.45 E-value=11 Score=31.12 Aligned_cols=22 Identities=18% Similarity=0.336 Sum_probs=19.6
Q ss_pred ecCCCeEEEEEEeCCCCceeEecC
Q 010129 111 VGQPALSFIVALDTGSDLFWLPCD 134 (517)
Q Consensus 111 vGTP~Q~~~v~vDTGS~~~Wv~~~ 134 (517)
|| +|.+.+++|||-|++-+...
T Consensus 27 i~--gq~~eaLLDTGAD~TVl~~~ 48 (124)
T 2rsp_A 27 QR--SVYITALLDSGADITIISEE 48 (124)
T ss_dssp CS--EEEEEEEECTTCSSCEEETT
T ss_pred CC--CEEEEEEecCCCCcEEEecc
Confidence 67 78899999999999999864
No 50
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=51.31 E-value=13 Score=33.48 Aligned_cols=26 Identities=23% Similarity=0.218 Sum_probs=23.5
Q ss_pred EEEEEecCCCeEEEEEEeCCCCceeEec
Q 010129 106 YTNVSVGQPALSFIVALDTGSDLFWLPC 133 (517)
Q Consensus 106 ~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~ 133 (517)
.+.|.|| +|.+..++|||-|++-+..
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 4789999 9999999999999998864
No 51
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=33.64 E-value=30 Score=33.35 Aligned_cols=41 Identities=17% Similarity=0.259 Sum_probs=28.1
Q ss_pred eecceeCCCCCeEEEEEeEEEeCCeeeeccCcEEEeccccceeecHHH
Q 010129 293 ETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPA 340 (517)
Q Consensus 293 ~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~iiDSGTt~~~lp~~~ 340 (517)
.++..+......|.++ |.|| +.+..++||||++.+++|..-
T Consensus 4 ~v~~~~~~~~~~Y~~~---i~iG----~Q~~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 4 SAVTTPQNNDEEYLTP---VTVG----KSTLHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEECTTTSCEEEE---EEEB----TEEEEEEEETTCCCEEEECTT
T ss_pred eEEeEEcCCCCEEEEE---EEEC----CEEEEEEEeCCCccceEeeCC
Confidence 4445554445567654 6677 335679999999999998754
No 52
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=32.20 E-value=40 Score=30.31 Aligned_cols=26 Identities=23% Similarity=0.218 Sum_probs=23.4
Q ss_pred EEEEEecCCCeEEEEEEeCCCCceeEec
Q 010129 106 YTNVSVGQPALSFIVALDTGSDLFWLPC 133 (517)
Q Consensus 106 ~~~v~vGTP~Q~~~v~vDTGS~~~Wv~~ 133 (517)
.+++.|| +|.+..++|||-|++-+..
T Consensus 114 ~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 114 LVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred cEEEEEC--CEEEeeeecccCCceeeec
Confidence 4789999 8999999999999998854
No 53
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=29.21 E-value=33 Score=33.07 Aligned_cols=41 Identities=17% Similarity=0.301 Sum_probs=27.3
Q ss_pred eecceeCCCCCeEEEEEeEEEeCCeeeeccCcEEEeccccceeecHHH
Q 010129 293 ETPFSLRQTHPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPA 340 (517)
Q Consensus 293 ~tp~~~~~~~~~y~v~l~~i~vg~~~~~~~~~~iiDSGTt~~~lp~~~ 340 (517)
.++..+......|.+ .|.||. .+..++||||++.+++|..-
T Consensus 5 ~v~~~~~~~~~~Y~~---~i~iG~----Q~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 5 VATNTPTANDEEYIT---PVTIGG----TTLNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEECGGGSCEEE---EEEETT----EEEEEEEETTCCCEEECBTT
T ss_pred ceeeeecCCCCEEEE---EEEECC----EEEEEEEeCCCcceEEecCC
Confidence 344444333445664 466773 35679999999999999753
No 54
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=26.30 E-value=39 Score=32.51 Aligned_cols=32 Identities=25% Similarity=0.386 Sum_probs=23.4
Q ss_pred CCeEEEEEeEEEeCCeeeeccCcEEEeccccceeecHHH
Q 010129 302 HPTYNITITQVSVGGNAVNFEFSAIFDSGTSFTYLNDPA 340 (517)
Q Consensus 302 ~~~y~v~l~~i~vg~~~~~~~~~~iiDSGTt~~~lp~~~ 340 (517)
...|.+ .|.|| +.+..++||||++.+++|..-
T Consensus 14 ~~~Y~~---~i~iG----~q~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 14 DEEYIT---QVTVG----DDTLGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp GCCEEE---EEEET----TEEEEEEEETTCCCEEECBTT
T ss_pred CCEEEE---EEEEC----CEEEEEEEcCCCcceEEecCC
Confidence 344654 46677 335679999999999999754
Done!