Your job contains 1 sequence.
>010130
MVLVSDFPLQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTV
LCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSS
MFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDTLAAGSLLEWK
GILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIKGFI
KLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGL
NEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQTLPTGVFPN
QTQPPVEGSPWRNAGLDSSWLHAWPSQGVDGAGPSTAMRSVGLSRVQMMMRHLASVGETY
AQTAIEDTSWSLWPMNPSQASASGSPVPPAVPGRHPGNTGGAHARSTSRSANENIANILA
MAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010130
(517 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2122674 - symbol:RIN2 "RPM1 interacting protei... 1927 4.7e-199 1
RGD|1311551 - symbol:Amfr "autocrine motility factor rece... 195 4.1e-26 3
UNIPROTKB|F1MWZ9 - symbol:AMFR "Uncharacterized protein" ... 249 5.3e-23 2
TAIR|locus:2093422 - symbol:Hrd1A "homolog of yeast Hrd1"... 222 6.4e-23 2
ZFIN|ZDB-GENE-040426-2190 - symbol:amfr "autocrine motili... 243 1.1e-22 2
MGI|MGI:1345634 - symbol:Amfr "autocrine motility factor ... 244 1.6e-22 2
UNIPROTKB|F1PK72 - symbol:AMFR "Uncharacterized protein" ... 239 4.1e-22 2
UNIPROTKB|Q9UKV5 - symbol:AMFR "E3 ubiquitin-protein liga... 241 4.4e-22 2
TAIR|locus:2014993 - symbol:Hrd1B "homolog of yeast Hrd1"... 217 1.2e-21 2
UNIPROTKB|H3BRK9 - symbol:AMFR "E3 ubiquitin-protein liga... 206 2.3e-21 2
UNIPROTKB|F1NBB7 - symbol:AMFR "Uncharacterized protein" ... 235 2.4e-21 2
UNIPROTKB|Q5XHH7 - symbol:syvn1-b "E3 ubiquitin-protein l... 211 2.3e-20 2
UNIPROTKB|Q6NRL6 - symbol:syvn1-a "E3 ubiquitin-protein l... 198 3.1e-18 2
ZFIN|ZDB-GENE-030131-7166 - symbol:syvn1 "synovial apopto... 190 5.1e-18 2
MGI|MGI:1921376 - symbol:Syvn1 "synovial apoptosis inhibi... 213 1.8e-17 2
UNIPROTKB|E1BAK9 - symbol:SYVN1 "Uncharacterized protein"... 194 3.0e-17 2
UNIPROTKB|I3LGG8 - symbol:SYVN1 "Uncharacterized protein"... 192 4.9e-17 2
DICTYBASE|DDB_G0279345 - symbol:amfr "putative E3 ubiquit... 218 5.2e-15 2
UNIPROTKB|E2RSJ2 - symbol:SYVN1 "Uncharacterized protein"... 218 1.7e-14 1
UNIPROTKB|Q86TM6 - symbol:SYVN1 "E3 ubiquitin-protein lig... 212 5.3e-14 1
ASPGD|ASPL0000044630 - symbol:AN1488 species:162425 "Emer... 165 7.7e-14 3
FB|FBgn0039875 - symbol:sip3 "septin interacting protein ... 180 1.4e-13 2
WB|WBGene00004768 - symbol:sel-11 species:6239 "Caenorhab... 168 1.4e-12 3
UNIPROTKB|A8WWR3 - symbol:hrdl-1 "E3 ubiquitin-protein li... 122 2.6e-10 3
WB|WBGene00009164 - symbol:hrdl-1 species:6239 "Caenorhab... 119 4.0e-10 3
UNIPROTKB|P90859 - symbol:hrdl-1 "E3 ubiquitin-protein li... 119 4.0e-10 3
DICTYBASE|DDB_G0287847 - symbol:DDB_G0287847 "putative E3... 174 9.6e-10 1
GENEDB_PFALCIPARUM|PF14_0215 - symbol:PF14_0215 "hypothet... 161 1.6e-08 1
UNIPROTKB|Q8ILM8 - symbol:PF14_0215 "Putative uncharacter... 161 1.6e-08 1
FB|FBgn0039668 - symbol:Trc8 "Trc8" species:7227 "Drosoph... 166 3.4e-08 2
POMBASE|SPBC17D11.02c - symbol:hrd1 "ubiquitin-protein li... 103 7.0e-08 3
ZFIN|ZDB-GENE-030131-5264 - symbol:rnf145b "ring finger p... 138 1.0e-07 2
UNIPROTKB|F1PJJ1 - symbol:RNF145 "Uncharacterized protein... 135 1.8e-07 2
UNIPROTKB|H3BQM3 - symbol:AMFR "E3 ubiquitin-protein liga... 128 2.0e-07 1
UNIPROTKB|J9NTM9 - symbol:RNF145 "Uncharacterized protein... 135 2.3e-07 2
UNIPROTKB|F1RR35 - symbol:RNF145 "Uncharacterized protein... 132 2.8e-07 2
UNIPROTKB|E1C258 - symbol:RNF145 "Uncharacterized protein... 133 3.4e-07 2
UNIPROTKB|Q96MT1 - symbol:RNF145 "RING finger protein 145... 132 3.4e-07 2
UNIPROTKB|E7EW26 - symbol:RNF145 "RING finger protein 145... 132 3.6e-07 2
UNIPROTKB|H3BSK3 - symbol:AMFR "E3 ubiquitin-protein liga... 140 3.9e-07 1
UNIPROTKB|F1MGV3 - symbol:RNF145 "Uncharacterized protein... 132 4.0e-07 2
UNIPROTKB|E9PMA1 - symbol:SYVN1 "E3 ubiquitin-protein lig... 95 8.4e-07 2
MGI|MGI:1921565 - symbol:Rnf145 "ring finger protein 145"... 129 1.5e-06 2
MGI|MGI:1923091 - symbol:Rnf139 "ring finger protein 139"... 145 1.5e-06 2
UNIPROTKB|E3M334 - symbol:Cre-hrdl-1 "CRE-HRDL-1 protein"... 111 1.6e-06 2
RGD|1306670 - symbol:Rnf139 "ring finger protein 139" spe... 119 1.8e-06 1
UNIPROTKB|F1NPF1 - symbol:RNF139 "Uncharacterized protein... 144 3.7e-06 2
RGD|1305337 - symbol:Triml1 "tripartite motif family-like... 136 7.7e-06 1
UNIPROTKB|F1RF19 - symbol:AMFR "Uncharacterized protein" ... 91 1.1e-05 2
UNIPROTKB|J9P149 - symbol:RNF139 "Uncharacterized protein... 136 1.1e-05 2
TAIR|locus:2059793 - symbol:XERICO species:3702 "Arabidop... 116 1.5e-05 1
TAIR|locus:2038766 - symbol:RHA2B "RING-H2 finger protein... 109 2.2e-05 1
UNIPROTKB|F1RRQ2 - symbol:F1RRQ2 "Uncharacterized protein... 131 3.1e-05 2
UNIPROTKB|E1BP63 - symbol:RNF139 "Uncharacterized protein... 130 3.1e-05 2
UNIPROTKB|I3LM12 - symbol:RNF139 "Uncharacterized protein... 131 3.9e-05 2
SGD|S000005373 - symbol:HRD1 "Ubiquitin-protein ligase" s... 109 4.0e-05 2
DICTYBASE|DDB_G0267718 - symbol:DDB_G0267718 species:4468... 128 8.2e-05 1
DICTYBASE|DDB_G0286909 - symbol:anapc11 "anaphase promoti... 102 0.00012 1
UNIPROTKB|Q8WU17 - symbol:RNF139 "E3 ubiquitin-protein li... 126 0.00013 2
UNIPROTKB|Q9BV68 - symbol:RNF126 "RING finger protein 126... 122 0.00014 1
RGD|1306011 - symbol:Rnf126 "ring finger protein 126" spe... 122 0.00014 1
MGI|MGI:1917544 - symbol:Rnf126 "ring finger protein 126"... 120 0.00021 1
UNIPROTKB|Q8TEB7 - symbol:RNF128 "E3 ubiquitin-protein li... 122 0.00023 1
UNIPROTKB|F1PCH2 - symbol:RNF126 "Uncharacterized protein... 119 0.00026 1
TAIR|locus:2147152 - symbol:AIP2 "ABI3-interacting protei... 119 0.00027 1
UNIPROTKB|Q29RU0 - symbol:RNF128 "E3 ubiquitin-protein li... 121 0.00030 1
CGD|CAL0000884 - symbol:orf19.7644 species:5476 "Candida ... 98 0.00033 1
UNIPROTKB|F1MCR4 - symbol:RNF128 "E3 ubiquitin-protein li... 119 0.00049 1
UNIPROTKB|E2RG93 - symbol:RNF128 "Uncharacterized protein... 119 0.00049 1
UNIPROTKB|F1RXM2 - symbol:LOC100515872 "Uncharacterized p... 119 0.00049 1
ASPGD|ASPL0000035856 - symbol:AN10394 species:162425 "Eme... 96 0.00055 1
TAIR|locus:2169263 - symbol:AT5G43200 species:3702 "Arabi... 112 0.00057 1
TAIR|locus:2153554 - symbol:DAF "DEFECTIVE IN ANTHER DEHI... 109 0.00061 1
TAIR|locus:2007008 - symbol:AT1G33480 species:3702 "Arabi... 114 0.00067 1
RGD|1561238 - symbol:RGD1561238 "similar to ring finger p... 95 0.00070 1
CGD|CAL0001749 - symbol:orf19.719 species:5476 "Candida a... 109 0.00076 2
ZFIN|ZDB-GENE-061215-82 - symbol:rnf115 "ring finger prot... 115 0.00076 1
RGD|1566282 - symbol:Rnf128 "ring finger protein 128, E3 ... 117 0.00081 1
TAIR|locus:2102569 - symbol:RZF1 "AT3G56580" species:3702... 115 0.00081 1
ZFIN|ZDB-GENE-080401-4 - symbol:rnf139 "ring finger prote... 127 0.00085 2
TAIR|locus:2142449 - symbol:RING1 species:3702 "Arabidops... 114 0.00093 1
>TAIR|locus:2122674 [details] [associations]
symbol:RIN2 "RPM1 interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0034052 "positive
regulation of plant-type hypersensitive response" evidence=IGI]
InterPro:IPR001841 InterPro:IPR003892 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270 EMBL:AL161563
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0009626 GO:GO:0004842
eggNOG:COG5243 KO:K10636 EMBL:AL035396 EMBL:AY072178 EMBL:DQ677669
IPI:IPI00517898 RefSeq:NP_194253.2 RefSeq:NP_849552.1
UniGene:At.43259 ProteinModelPortal:Q8VYC8 SMR:Q8VYC8 STRING:Q8VYC8
EnsemblPlants:AT4G25230.1 EnsemblPlants:AT4G25230.2 GeneID:828626
KEGG:ath:AT4G25230 TAIR:At4g25230 HOGENOM:HOG000029409
InParanoid:Q8VYC8 OMA:WSLWPMN PhylomeDB:Q8VYC8
ProtClustDB:CLSN2689987 Genevestigator:Q8VYC8 GO:GO:0034052
Uniprot:Q8VYC8
Length = 578
Score = 1927 (683.4 bits), Expect = 4.7e-199, P = 4.7e-199
Identities = 359/509 (70%), Positives = 419/509 (82%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQ 68
L+T+FFG+LY ET+K VERL NY+IYKGTFLPLVIPPT+FQ LW+VWLTVLC+LKMFQ
Sbjct: 78 LKTLFFGDLYDVETKKLVERLANYIIYKGTFLPLVIPPTIFQGVLWTVWLTVLCTLKMFQ 137
Query: 69 ALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFE 128
ALARDRLERLNASPS+TPWTYFRV+S L VL+VD+FWI++ L+ + T+ S+++LLL FE
Sbjct: 138 ALARDRLERLNASPSSTPWTYFRVYSVLFLVLSVDMFWIKLSLMTYNTIGSAVYLLLLFE 197
Query: 129 PLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDTLAAGSLLEWKGILIRNFG 188
P S+AFET+QA+L+HGFQLLD+W++H A +++C RSKF D++ AGSLLEWKG+L RN G
Sbjct: 198 PCSIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSKFIDSMTAGSLLEWKGLLNRNLG 257
Query: 189 FFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGH 248
FFLDMATL+MALGHY+HIWWL G+AFHLVDA+LFLNIRALLSAI+KRIKG+IKLRIALG
Sbjct: 258 FFLDMATLVMALGHYLHIWWLHGIAFHLVDAVLFLNIRALLSAILKRIKGYIKLRIALGA 317
Query: 249 LHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPT 308
LHAALPDATSEELRAYDDECAICREPMAKAK+L CNHLFHL CLRSWLDQGLNE+YSCPT
Sbjct: 318 LHAALPDATSEELRAYDDECAICREPMAKAKRLHCNHLFHLGCLRSWLDQGLNEVYSCPT 377
Query: 309 CRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQTLPTGVFPNQTQPPVEG 368
CRKPLFVGR E E N R EVSSDEQLARQL +RQNN L TG+FP + VE
Sbjct: 378 CRKPLFVGRTENEVNPRTVEVSSDEQLARQL----ERQNNPVHALATGLFPAEVPDSVEN 433
Query: 369 SPWRNAGLDSSWLHAWPSQGVDGAGPSTAMRSVGLSRVQMMMRHLASVGETYAQTAIEDT 428
RN GLD SWL W SQG D AGPST R+VGL RVQMMMRHLASVGE+YAQTA++D
Sbjct: 434 DTSRNLGLDPSWLQTWSSQGSDVAGPSTTSRTVGLGRVQMMMRHLASVGESYAQTALDDA 493
Query: 429 SWSLWPMNXXXXXXXXXXXXXXXXXRHPGNTGGAHARSTSRSANENIANILAMAETVREV 488
+WSLWPMN + G TGG H R+ S + NE++ NILAMAETVREV
Sbjct: 494 AWSLWPMNPSQASTSSTTVPPG----NGGRTGGLHLRTVSNTTNESLTNILAMAETVREV 549
Query: 489 LPHMPEDLIFQDLQRTNSATITVNNLLQM 517
+PH+P+++IFQDLQRTNS +TVNNLLQM
Sbjct: 550 MPHVPDEIIFQDLQRTNSVAVTVNNLLQM 578
>RGD|1311551 [details] [associations]
symbol:Amfr "autocrine motility factor receptor, E3 ubiquitin
protein ligase" species:10116 "Rattus norvegicus" [GO:0000209
"protein polyubiquitination" evidence=ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA;ISO] [GO:0004872 "receptor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007568 "aging" evidence=IEP]
[GO:0007611 "learning or memory" evidence=IEP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0030176 "integral to endoplasmic
reticulum membrane" evidence=ISO] [GO:0030425 "dendrite"
evidence=IDA] [GO:0030426 "growth cone" evidence=IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=ISO] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=ISO]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=ISO] InterPro:IPR001841
InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
RGD:1311551 GO:GO:0051259 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0008270
GO:GO:0030426 GO:GO:0007611 GO:GO:0030176 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 OrthoDB:EOG4DJJW8
GO:GO:0030968 GO:GO:0000209 PANTHER:PTHR12477:SF4
GeneTree:ENSGT00530000062938 IPI:IPI00365150 PRIDE:D4ADJ6
Ensembl:ENSRNOT00000026340 UCSC:RGD:1311551 Uniprot:D4ADJ6
Length = 643
Score = 195 (73.7 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 53/163 (32%), Positives = 82/163 (50%)
Query: 178 EWKGILIRNFGFFLDMATLLMALGHYIHIW-----WLRGMAFHLVDAILFLNIRALLSAI 232
E KG + F +++ L + L H+IH+ W+ G +++ L + +S +
Sbjct: 251 EGKGTYVYYTDFVMELMLLSLDLMHHIHMLVSGTVWISG-GLDVMNVSLTGATVSAVSFV 309
Query: 233 IKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACL 292
+ + GF++ + + AT+EEL +D+CAIC + M A+KL C HLFH +CL
Sbjct: 310 LNSL-GFLR---TIKNKICRFAVATAEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCL 365
Query: 293 RSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 335
RSWL+Q SCPTCR L + GE + DE L
Sbjct: 366 RSWLEQDT----SCPTCRMSLNIADGSRAREDHQGE-NLDENL 403
Score = 129 (50.5 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 41/151 (27%), Positives = 69/151 (45%)
Query: 1 MVLVSDFPLQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIP-PTVFQAGLWSVWLT 59
++LV+ +Q I FG L +E + ++ N++ YK F+ V+ TV + +W +W
Sbjct: 95 LMLVAKL-IQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFA 153
Query: 60 VLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDS 119
L L + L +DR E L+ SP+ ++ RV S L+ +L +C + T
Sbjct: 154 GLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGM 213
Query: 120 SMFLLLFFEPLSVAFETMQAILVHGFQLLDI 150
+ E L V T IL + L D+
Sbjct: 214 HTLAFMAAESLLVTVRTAHVILRYVIHLWDL 244
Score = 92 (37.4 bits), Expect = 4.1e-26, Sum P(3) = 4.1e-26
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 480 AMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
AMA ++E+ P +P L+ QDLQ T S IT +N+L+
Sbjct: 459 AMAHQIQEMFPQVPYHLVLQDLQMTRSVEITTDNILE 495
>UNIPROTKB|F1MWZ9 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051259 "protein oligomerization" evidence=IEA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0051259 GO:GO:0046872
GO:GO:0008270 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 OMA:YTDFIME GO:GO:0030968 GO:GO:0000209
PANTHER:PTHR12477:SF4 GeneTree:ENSGT00530000062938
EMBL:DAAA02046496 EMBL:DAAA02046497 IPI:IPI00742613
Ensembl:ENSBTAT00000004952 Uniprot:F1MWZ9
Length = 646
Score = 249 (92.7 bits), Expect = 5.3e-23, Sum P(2) = 5.3e-23
Identities = 55/158 (34%), Positives = 82/158 (51%)
Query: 178 EWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIK 237
E KG + F +++ L + L H+IH+ + + ++F+ +R L + +RI+
Sbjct: 254 EGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIR 313
Query: 238 GFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLD 297
+G++ A AT EEL +D+CAIC + M A+KL C HLFH +CLRSWL+
Sbjct: 314 RHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLE 373
Query: 298 QGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 335
Q SCPTCR L + PGE + DE L
Sbjct: 374 QDT----SCPTCRMSLNIADNNRVREDHPGE-NLDENL 406
Score = 139 (54.0 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 58/211 (27%), Positives = 92/211 (43%)
Query: 1 MVLVSDFPLQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIP-PTVFQAGLWSVWLT 59
++LV+ +Q I FG L +E + ++ N++ YK F+ V+ TV + +W +W
Sbjct: 98 LMLVAKL-IQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFA 156
Query: 60 VLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDS 119
L L + L +DR E L+ SP+ ++ RV S L+ +L +C + T
Sbjct: 157 GLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLLSCCGLAVVCCVTGYTHGM 216
Query: 120 SMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSA--GNSTNCARSKFFDTLAAGSLL 177
+ E L V T IL + L D+ H G T + F L SL
Sbjct: 217 HTLAFMAAESLLVTVRTAHVILRYVIHLWDL-SHEGTWEGKGTYVYYTDFVMELTLLSLD 275
Query: 178 EWKGILIRNFG-FFLDMATLL--MALGHYIH 205
I + FG +L MA+L+ M L + H
Sbjct: 276 LMHHIHMLLFGNIWLSMASLVIFMQLRYLFH 306
Score = 91 (37.1 bits), Expect = 5.3e-23, Sum P(2) = 5.3e-23
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 480 AMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
AMA ++E+ P +P L+ QDLQ T S IT +N+L+
Sbjct: 462 AMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILE 498
Score = 46 (21.3 bits), Expect = 2.6e-18, Sum P(2) = 2.6e-18
Identities = 19/66 (28%), Positives = 28/66 (42%)
Query: 326 PGEVSSDEQLARQLSMGLDRQNNTGQTLPTGVFPNQTQP-PVEGSPWRNAGLDSSWLHAW 384
P E + L+ ++R N + V QT+ P++ SP LD L A
Sbjct: 504 PFPTQRSESIRPALNSPVERPNGEQEDGEASV---QTERVPLDLSPRLEEVLDFGELEAE 560
Query: 385 PSQGVD 390
PS+G D
Sbjct: 561 PSEGED 566
>TAIR|locus:2093422 [details] [associations]
symbol:Hrd1A "homolog of yeast Hrd1" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0008295 "spermidine biosynthetic
process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
EMBL:AB012247 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433
HSSP:Q9LRB7 eggNOG:COG5243 HOGENOM:HOG000294196 KO:K10601
EMBL:DQ059113 EMBL:AK117158 IPI:IPI00546313 RefSeq:NP_188230.1
UniGene:At.38946 UniGene:At.75414 ProteinModelPortal:Q9LW77
SMR:Q9LW77 PaxDb:Q9LW77 PRIDE:Q9LW77 EnsemblPlants:AT3G16090.1
GeneID:820854 KEGG:ath:AT3G16090 TAIR:At3g16090 InParanoid:Q9LW77
OMA:MVALANS PhylomeDB:Q9LW77 ProtClustDB:CLSN2685297
Genevestigator:Q9LW77 Uniprot:Q9LW77
Length = 492
Score = 222 (83.2 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 59/173 (34%), Positives = 87/173 (50%)
Query: 187 FGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIKGFIKLRIAL 246
+ F+L++ L+ L YI +++ M + V L + R+ +++ R
Sbjct: 212 YTFYLELIRDLLHLSMYICFFFVIFMNYG-VPLHLLRELYETFRNFQIRVSDYLRYRKIT 270
Query: 247 GHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSC 306
+++ PDAT EEL A D C ICRE M AKKL+C HLFH+ CLRSWL++ +C
Sbjct: 271 SNMNDRFPDATPEELTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLER----QQTC 326
Query: 307 PTCRKPLFV----------GRREIEANSRPGEVSSDEQLARQLSMGLDRQNNT 349
PTCR L V G+RE+ S+ G SS Q ++S NN+
Sbjct: 327 PTCRA-LVVPPENATSAAPGQRELHQGSQQGTSSSGNQ-GSEISSSAGVSNNS 377
Score = 115 (45.5 bits), Expect = 6.4e-23, Sum P(2) = 6.4e-23
Identities = 39/143 (27%), Positives = 75/143 (52%)
Query: 12 IFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQAL- 70
+F G L AE VERL N ++ + ++ T+F+ S +L ++ +L + +AL
Sbjct: 64 VFLGSLREAE----VERL-NEQAWR-ELMEILFAITIFRQDFSSGFLPLVVTLLLIKALH 117
Query: 71 --ARDRLERLNASPSATPWTYFRVFSALLFVLAVD-IFWIRMCLLLFKTLDSSMFLLLFF 127
A+ R+E + +PS + ++FR+ S + F+L VD +F L ++ +S+ L F
Sbjct: 118 WLAQKRVEYIETTPSVSKLSHFRIVSFMGFLLLVDSLFMYSSIRHLIQSRQASVSLFFSF 177
Query: 128 EPLSVAFETMQAILVHGFQLLDI 150
E + +A T+ + + F + D+
Sbjct: 178 EYMILATTTVAIFVKYVFYVTDM 200
>ZFIN|ZDB-GENE-040426-2190 [details] [associations]
symbol:amfr "autocrine motility factor receptor"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 ZFIN:ZDB-GENE-040426-2190 GO:GO:0046872
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 CTD:267 eggNOG:COG5243 HOGENOM:HOG000037436
HOVERGEN:HBG044694 KO:K10636 OrthoDB:EOG4DJJW8
PANTHER:PTHR12477:SF4 EMBL:BC057411 IPI:IPI00488003
RefSeq:NP_998328.1 UniGene:Dr.13893 ProteinModelPortal:Q6PFU8
SMR:Q6PFU8 STRING:Q6PFU8 GeneID:406442 KEGG:dre:406442
InParanoid:Q6PFU8 NextBio:20818037 ArrayExpress:Q6PFU8
Uniprot:Q6PFU8
Length = 620
Score = 243 (90.6 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 52/139 (37%), Positives = 78/139 (56%)
Query: 189 FFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGH 248
F +++A L + L H+IH+ + + ++F+ +R L + +RI+ + +
Sbjct: 255 FIMELAILSLDLMHHIHMLLFGNIWLSMASLVIFMQLRHLFHEVQRRIRRHKNYLRVIDN 314
Query: 249 LHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPT 308
+ + AT EEL A +D+CAIC + M A+KL C HLFH +CLRSWL+Q SCPT
Sbjct: 315 MESRFAVATPEELAANNDDCAICWDSMTTARKLPCGHLFHNSCLRSWLEQDT----SCPT 370
Query: 309 CRKPLFV--GRREIEANSR 325
CR L + GRRE E R
Sbjct: 371 CRMSLNIHEGRREREEGQR 389
Score = 141 (54.7 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 57/204 (27%), Positives = 90/204 (44%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIP-PTVFQAGLWSVWLTVLCSLKMF 67
+Q I FG L +E + ++ N++ YK F+ V+ V + LW +W ++L L +
Sbjct: 95 IQCIVFGPLRVSEKQHLKDKFWNFIFYKFIFIFGVLNVQRVEEVVLWCLWFSMLIFLHLM 154
Query: 68 QALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFF 127
L +DR E L+ SP+ ++ RV + L+ VL+ +C L +
Sbjct: 155 VQLCKDRFEYLSFSPTTPMSSHVRVLALLVSVLSCCGGLAVLCALAGHIHGMHTVAFMAA 214
Query: 128 EPLSVAFETMQAILVHGFQLLDIWLHHSA---GNSTNCARSKFFDTLAAGSLLEWKGILI 184
E L V T I+ + L D L+H S+ + F LA SL I +
Sbjct: 215 ECLLVTVRTGHVIIRYSIHLWD--LNHEGTWENKSSYIYYTDFIMELAILSLDLMHHIHM 272
Query: 185 RNFG-FFLDMATLL--MALGHYIH 205
FG +L MA+L+ M L H H
Sbjct: 273 LLFGNIWLSMASLVIFMQLRHLFH 296
Score = 94 (38.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 463 HARSTSRSANENIANILAMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
H + A N + + MA ++E+ P +P LI QDLQ T S +T +N+L+
Sbjct: 435 HTTNILGIAQANNSQLNGMAHQIQEMFPQVPYHLILQDLQLTRSVEVTTDNILE 488
>MGI|MGI:1345634 [details] [associations]
symbol:Amfr "autocrine motility factor receptor"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISO] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0004872 "receptor activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005887 "integral to
plasma membrane" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009987 "cellular process" evidence=TAS]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030176 "integral to endoplasmic reticulum membrane"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0030426
"growth cone" evidence=ISO] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISO] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=ISO] [GO:0043025 "neuronal cell
body" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051259 "protein
oligomerization" evidence=ISO] InterPro:IPR001841
InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
UniPathway:UPA00143 MGI:MGI:1345634 Prosite:PS00518 GO:GO:0051259
GO:GO:0005634 GO:GO:0005887 GO:GO:0000166 GO:GO:0046872
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0008270
GO:GO:0030426 GO:GO:0007611 GO:GO:0030176 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 CTD:267
eggNOG:COG5243 HOGENOM:HOG000037436 HOVERGEN:HBG044694 KO:K10636
OMA:YTDFIME OrthoDB:EOG4DJJW8 ChiTaRS:AMFR GO:GO:0030968
GO:GO:0000209 PANTHER:PTHR12477:SF4 EMBL:AF124144 EMBL:BC003256
EMBL:BC034538 EMBL:BC040338 IPI:IPI00319880 IPI:IPI00351315
RefSeq:NP_035917.2 UniGene:Mm.34641 UniGene:Mm.490390
UniGene:Mm.490433 ProteinModelPortal:Q9R049 SMR:Q9R049
IntAct:Q9R049 STRING:Q9R049 PhosphoSite:Q9R049 PaxDb:Q9R049
PRIDE:Q9R049 Ensembl:ENSMUST00000053766 GeneID:23802 KEGG:mmu:23802
GeneTree:ENSGT00530000062938 InParanoid:Q9R049 NextBio:303423
Bgee:Q9R049 CleanEx:MM_AMFR Genevestigator:Q9R049
GermOnline:ENSMUSG00000031751 Uniprot:Q9R049
Length = 643
Score = 244 (91.0 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 55/158 (34%), Positives = 82/158 (51%)
Query: 178 EWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIK 237
E KG + F +++A L + L H+IH+ + + ++F+ +R L + +RI+
Sbjct: 251 EGKGTYVYYTDFVMELALLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIR 310
Query: 238 GFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLD 297
+G++ A AT EEL +D+CAIC + M A+KL C HLFH +CLRSWL+
Sbjct: 311 RHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLE 370
Query: 298 QGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 335
Q SCPTCR L + GE + DE L
Sbjct: 371 QDT----SCPTCRMSLNIADGSRAREDHQGE-NLDENL 403
Score = 145 (56.1 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 60/212 (28%), Positives = 94/212 (44%)
Query: 1 MVLVSDFPLQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIP-PTVFQAGLWSVWLT 59
++LV+ +Q I FG L +E + ++ N++ YK F+ V+ TV + +W +W
Sbjct: 95 LMLVAKL-IQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFA 153
Query: 60 VLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDS 119
L L + L +DR E L+ SP+ ++ RV S L+ +L +C + T
Sbjct: 154 GLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGM 213
Query: 120 SMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSA---GNSTNCARSKFFDTLAAGSL 176
+ E L V T IL + L D L+H G T + F LA SL
Sbjct: 214 HTLAFMAAESLLVTVRTAHVILRYVIHLWD--LNHEGTWEGKGTYVYYTDFVMELALLSL 271
Query: 177 LEWKGILIRNFG-FFLDMATLL--MALGHYIH 205
I + FG +L MA+L+ M L + H
Sbjct: 272 DLMHHIHMLLFGNIWLSMASLVIFMQLRYLFH 303
Score = 92 (37.4 bits), Expect = 1.6e-22, Sum P(2) = 1.6e-22
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 480 AMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
AMA ++E+ P +P L+ QDLQ T S IT +N+L+
Sbjct: 459 AMAHQIQEMFPQVPYHLVLQDLQMTRSVEITTDNILE 495
>UNIPROTKB|F1PK72 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051259 "protein oligomerization"
evidence=IEA] [GO:0030968 "endoplasmic reticulum unfolded protein
response" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IEA] [GO:0004872 "receptor
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0051259 GO:GO:0046872
GO:GO:0008270 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 OMA:YTDFIME GO:GO:0030968 GO:GO:0000209
PANTHER:PTHR12477:SF4 GeneTree:ENSGT00530000062938
EMBL:AAEX03001585 Ensembl:ENSCAFT00000014581 Uniprot:F1PK72
Length = 560
Score = 239 (89.2 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 53/158 (33%), Positives = 82/158 (51%)
Query: 178 EWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIK 237
E KG + F +++ L + L H+IH+ + + ++F+ +R L + +RI+
Sbjct: 166 EGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIR 225
Query: 238 GFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLD 297
+G++ A AT EEL +D+CAIC + M A+KL C HLFH +CLRSWL+
Sbjct: 226 RHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLE 285
Query: 298 QGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 335
Q SCPTCR L + + G+ + DE L
Sbjct: 286 QDT----SCPTCRMSLNIADNNRVREDQQGD-NLDENL 318
Score = 134 (52.2 bits), Expect = 2.7e-10, Sum P(2) = 2.7e-10
Identities = 57/212 (26%), Positives = 92/212 (43%)
Query: 1 MVLVSDFPLQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIP-PTVFQAGLWSVWLT 59
++LV+ +Q I FG L +E + ++ N++ YK F+ V+ TV + +W +W
Sbjct: 10 LMLVAKL-IQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFA 68
Query: 60 VLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDS 119
L L + L +DR E ++ P+ ++ RV S L+ +L +C + T
Sbjct: 69 GLVFLHLMVQLCKDRFEYVSFQPTTPMSSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGM 128
Query: 120 SMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSA---GNSTNCARSKFFDTLAAGSL 176
+ E L V T IL + L D L+H G T + F L SL
Sbjct: 129 HTLAFMAAESLLVTVRTAHVILRYVIHLWD--LNHEGTWEGKGTYVYYTDFVMELTLLSL 186
Query: 177 LEWKGILIRNFG-FFLDMATLL--MALGHYIH 205
I + FG +L MA+L+ M L + H
Sbjct: 187 DLMHHIHMLLFGNIWLSMASLVIFMQLRYLFH 218
Score = 91 (37.1 bits), Expect = 4.1e-22, Sum P(2) = 4.1e-22
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 480 AMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
AMA ++E+ P +P L+ QDLQ T S IT +N+L+
Sbjct: 374 AMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILE 410
Score = 42 (19.8 bits), Expect = 5.3e-17, Sum P(2) = 5.3e-17
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 361 QTQP-PVEGSPWRNAGLDSSWLHAWPSQGVD 390
QT+ P++ SP LD S + PS+G D
Sbjct: 448 QTERVPLDLSPRLEEALDFSEVEVEPSEGED 478
>UNIPROTKB|Q9UKV5 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IMP;IDA] [GO:0030176
"integral to endoplasmic reticulum membrane" evidence=IDA]
[GO:0004872 "receptor activity" evidence=IPI] [GO:0016021 "integral
to membrane" evidence=NAS] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP;IDA] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0051259 "protein
oligomerization" evidence=IDA] [GO:0030968 "endoplasmic reticulum
unfolded protein response" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0006928 "cellular component movement" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] InterPro:IPR001841
InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0051259 GO:GO:0005634
GO:GO:0046872 GO:GO:0007568 GO:GO:0043025 GO:GO:0030425
GO:GO:0008270 GO:GO:0004872 GO:GO:0006928 GO:GO:0030426
GO:GO:0007611 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 EMBL:AF124145 EMBL:BC069197 EMBL:L35233
EMBL:M63175 IPI:IPI00423874 IPI:IPI00435690 PIR:A39877
RefSeq:NP_001135.3 UniGene:Hs.295137 UniGene:Hs.593157 PDB:2EJS
PDB:2LVN PDB:2LVO PDB:2LVP PDB:2LVQ PDB:3FSH PDB:3H8K PDB:3TIW
PDB:4G3O PDBsum:2EJS PDBsum:2LVN PDBsum:2LVO PDBsum:2LVP
PDBsum:2LVQ PDBsum:3FSH PDBsum:3H8K PDBsum:3TIW PDBsum:4G3O
ProteinModelPortal:Q9UKV5 SMR:Q9UKV5 DIP:DIP-29060N IntAct:Q9UKV5
STRING:Q9UKV5 PhosphoSite:Q9UKV5 DMDM:113707 DMDM:34922250
PeptideAtlas:Q9UKV5 PRIDE:Q9UKV5 Ensembl:ENST00000290649 GeneID:267
KEGG:hsa:267 UCSC:uc002eiy.3 CTD:267 GeneCards:GC16M056395
HGNC:HGNC:463 HPA:CAB026381 MIM:603243 neXtProt:NX_Q9UKV5
PharmGKB:PA24768 eggNOG:COG5243 HOGENOM:HOG000037436
HOVERGEN:HBG044694 InParanoid:Q9UKV5 KO:K10636 OMA:YTDFIME
OrthoDB:EOG4DJJW8 PhylomeDB:Q9UKV5 ChiTaRS:AMFR
EvolutionaryTrace:Q9UKV5 GenomeRNAi:267 NextBio:1049
ArrayExpress:Q9UKV5 Bgee:Q9UKV5 CleanEx:HS_AMFR
Genevestigator:Q9UKV5 GermOnline:ENSG00000159461 GO:GO:0030968
GO:GO:0000209 PANTHER:PTHR12477:SF4 Uniprot:Q9UKV5
Length = 643
Score = 241 (89.9 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 54/158 (34%), Positives = 81/158 (51%)
Query: 178 EWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIK 237
E KG + F +++ L + L H+IH+ + + ++F+ +R L + +RI+
Sbjct: 251 EGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIR 310
Query: 238 GFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLD 297
+G++ A AT EEL +D+CAIC + M A+KL C HLFH +CLRSWL+
Sbjct: 311 RHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLFHNSCLRSWLE 370
Query: 298 QGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 335
Q SCPTCR L + GE + DE L
Sbjct: 371 QDT----SCPTCRMSLNIADNNRVREEHQGE-NLDENL 403
Score = 142 (55.0 bits), Expect = 5.3e-11, Sum P(2) = 5.3e-11
Identities = 59/212 (27%), Positives = 93/212 (43%)
Query: 1 MVLVSDFPLQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIP-PTVFQAGLWSVWLT 59
++LV+ +Q I FG L +E + ++ N++ YK F+ V+ TV + +W +W
Sbjct: 95 LMLVAKL-IQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFA 153
Query: 60 VLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDS 119
L L + L +DR E L+ SP+ ++ RV S L+ +L +C + T
Sbjct: 154 GLVFLHLMVQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLLSCCGLAAVCSITGYTHGM 213
Query: 120 SMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSA---GNSTNCARSKFFDTLAAGSL 176
+ E L V T IL + L D L+H G T + F L SL
Sbjct: 214 HTLAFMAAESLLVTVRTAHVILRYVIHLWD--LNHEGTWEGKGTYVYYTDFVMELTLLSL 271
Query: 177 LEWKGILIRNFG-FFLDMATLL--MALGHYIH 205
I + FG +L MA+L+ M L + H
Sbjct: 272 DLMHHIHMLLFGNIWLSMASLVIFMQLRYLFH 303
Score = 91 (37.1 bits), Expect = 4.4e-22, Sum P(2) = 4.4e-22
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 480 AMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
AMA ++E+ P +P L+ QDLQ T S IT +N+L+
Sbjct: 459 AMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILE 495
>TAIR|locus:2014993 [details] [associations]
symbol:Hrd1B "homolog of yeast Hrd1" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IMP]
[GO:0006457 "protein folding" evidence=RCA] [GO:0008295 "spermidine
biosynthetic process" evidence=RCA] [GO:0009408 "response to heat"
evidence=RCA] [GO:0009644 "response to high light intensity"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] [GO:0042542 "response to hydrogen peroxide"
evidence=RCA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GO:GO:0005886 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 HOGENOM:HOG000294196 KO:K10601 EMBL:BT010730
EMBL:AB189470 EMBL:AK228264 IPI:IPI00529648 RefSeq:NP_849843.3
UniGene:At.46831 ProteinModelPortal:Q6NPT7 SMR:Q6NPT7 PRIDE:Q6NPT7
EnsemblPlants:AT1G65040.2 GeneID:842812 KEGG:ath:AT1G65040
TAIR:At1g65040 OMA:ASENMSR ProtClustDB:CLSN2918918
Genevestigator:Q6NPT7 Uniprot:Q6NPT7
Length = 460
Score = 217 (81.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 58/190 (30%), Positives = 89/190 (46%)
Query: 178 EWKGILIRNFGFFL--DMATLLMALGHYIHIWWLRGMAFHLVDAIL--FLNIRALLSAII 233
+W+G + F L D+ L M L ++ I+ G+ HL+ + F N +
Sbjct: 205 QWEGKPVYTFYLELVRDLLHLSMYLCFFLMIFMNYGLPLHLIRELYETFRNFKI------ 258
Query: 234 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLR 293
R+ +++ R +++ PDAT EEL + D C ICRE M AKKL+C HLFH+ CLR
Sbjct: 259 -RVTDYLRYRKITSNMNDRFPDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLR 317
Query: 294 SWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQTL 353
SWL++ +CPTCR L V + + E L Q G + G ++
Sbjct: 318 SWLER----QNTCPTCRA-LVVPAENATSTASGNRGPHQESL--QQGTGTSSSDGQGSSV 370
Query: 354 PTGVFPNQTQ 363
N ++
Sbjct: 371 SAAASENMSR 380
Score = 107 (42.7 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 38/147 (25%), Positives = 76/147 (51%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQ----AGLWSVWLTVLCSL 64
++ +F G L AE VERL N ++ + ++ T+F+ G S+ +T+L +
Sbjct: 61 VKIVFLGSLREAE----VERL-NEQAWR-ELMEILFAITIFRQDFSVGFISLVVTLLL-I 113
Query: 65 KMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLL-LFKTLDSSMFL 123
K +A+ R+E + +PS T ++ R+ S ++F+L +D + L ++ +SM +
Sbjct: 114 KGLHWMAQKRVEYIETTPSVTLLSHVRIVSFMVFLLILDCLLTYSSIQQLIQSRKASMSV 173
Query: 124 LLFFEPLSVAFETMQAILVHGFQLLDI 150
FE + +A T+ I+ + F + D+
Sbjct: 174 FFTFEYMILATTTVSIIVKYAFYVTDM 200
>UNIPROTKB|H3BRK9 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
HGNC:HGNC:463 ChiTaRS:AMFR PANTHER:PTHR12477:SF4 EMBL:AC092140
EMBL:AC009102 Ensembl:ENST00000567738 Bgee:H3BRK9 Uniprot:H3BRK9
Length = 288
Score = 206 (77.6 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 45/120 (37%), Positives = 64/120 (53%)
Query: 216 LVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPM 275
+ ++F+ +R L + +RI+ +G++ A AT EEL +D+CAIC + M
Sbjct: 4 MASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSM 63
Query: 276 AKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 335
A+KL C HLFH +CLRSWL+Q SCPTCR L + GE + DE L
Sbjct: 64 QAARKLPCGHLFHNSCLRSWLEQDT----SCPTCRMSLNIADNNRVREEHQGE-NLDENL 118
Score = 91 (37.1 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 480 AMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
AMA ++E+ P +P L+ QDLQ T S IT +N+L+
Sbjct: 206 AMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILE 242
>UNIPROTKB|F1NBB7 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000209 "protein polyubiquitination" evidence=IEA] [GO:0004872
"receptor activity" evidence=IEA] [GO:0030176 "integral to
endoplasmic reticulum membrane" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=IEA]
[GO:0051259 "protein oligomerization" evidence=IEA]
InterPro:IPR001841 InterPro:IPR003892 InterPro:IPR026608
Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140
SMART:SM00184 SMART:SM00546 GO:GO:0051259 GO:GO:0046872
GO:GO:0008270 GO:GO:0030176 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 OMA:YTDFIME GO:GO:0030968 GO:GO:0000209
PANTHER:PTHR12477:SF4 GeneTree:ENSGT00530000062938
EMBL:AADN02051556 EMBL:AADN02051557 IPI:IPI00586421
Ensembl:ENSGALT00000004906 Uniprot:F1NBB7
Length = 559
Score = 235 (87.8 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 49/136 (36%), Positives = 74/136 (54%)
Query: 178 EWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIK 237
E KG + F +++ L + L H+IH+ + + ++F+ +R L + +RI+
Sbjct: 167 EGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFHEVQRRIR 226
Query: 238 GFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLD 297
+G++ A AT EEL +D+CAIC + M A+KL C HLFH +CLRSWL+
Sbjct: 227 RHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQSARKLPCGHLFHNSCLRSWLE 286
Query: 298 QGLNEMYSCPTCRKPL 313
Q SCPTCR L
Sbjct: 287 QDT----SCPTCRMSL 298
Score = 131 (51.2 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 57/213 (26%), Positives = 95/213 (44%)
Query: 1 MVLVSDFPLQTIFFGELYPAETRKFVERLINYVI-YKGTFLPLVIP-PTVFQAGLWSVWL 58
++LV+ +Q + FG L +E + ++ N++ YK F+ V+ TV + +W +W
Sbjct: 10 LMLVAKL-IQRVVFGPLRVSERQHLKDKFWNFIFFYKFIFIFGVLNVQTVEEVVMWCLWF 68
Query: 59 TVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLD 118
+ L L + L +DR E L+ SP+ ++ RV + L+ +L +C ++ T
Sbjct: 69 SGLVFLHLMVQLCKDRFEYLSFSPTTPMSSHIRVLTLLVAMLLSCCGLAVVCGVIGYTHG 128
Query: 119 SSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSA---GNSTNCARSKFFDTLAAGS 175
+ E L V T IL + L D L+H G T + F L S
Sbjct: 129 MHTLAFMAAESLLVTVRTAHVILRYVIHLWD--LNHEGTWEGKGTYVYYTDFVMELTLLS 186
Query: 176 LLEWKGILIRNFG-FFLDMATLL--MALGHYIH 205
L I + FG +L MA+L+ M L + H
Sbjct: 187 LDLMHHIHMLLFGNIWLSMASLVIFMQLRYLFH 219
Score = 88 (36.0 bits), Expect = 2.4e-21, Sum P(2) = 2.4e-21
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 480 AMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
AMA ++E+ P +P ++ QDLQ T S IT +N+L+
Sbjct: 375 AMAHQIQEMFPQVPYHVVLQDLQLTRSVEITTDNILE 411
>UNIPROTKB|Q5XHH7 [details] [associations]
symbol:syvn1-b "E3 ubiquitin-protein ligase synoviolin B"
species:8355 "Xenopus laevis" [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 KO:K10601 HOVERGEN:HBG094015 EMBL:BC084080
RefSeq:NP_001088172.1 UniGene:Xl.64351 ProteinModelPortal:Q5XHH7
GeneID:494996 KEGG:xla:494996 CTD:494996 Xenbase:XB-GENE-6254740
Uniprot:Q5XHH7
Length = 595
Score = 211 (79.3 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 54/149 (36%), Positives = 77/149 (51%)
Query: 234 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACL 292
K + + R A+ +++ PDAT+EEL+A D+ C ICRE M AK+L CNH+FH +CL
Sbjct: 251 KAVTDAVMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVSGAKRLPCNHIFHTSCL 310
Query: 293 RSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNN--TG 350
RSW + +CPTCR + + + P E + Q +Q + + Q N G
Sbjct: 311 RSWFQR----QQTCPTCRMDVLRASLPTQPQT-PAEQQNQHQAQQQPTPVVPPQPNFPPG 365
Query: 351 QT--LPTGVFP---NQTQ-PPVEGSPWRN 373
P G+FP Q PPV G+P N
Sbjct: 366 MLPPFPPGMFPLWPPMGQFPPVPGAPVGN 394
Score = 106 (42.4 bits), Expect = 2.3e-20, Sum P(2) = 2.3e-20
Identities = 34/118 (28%), Positives = 60/118 (50%)
Query: 12 IFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALA 71
+FFG+L AE +ER Y + + T L + F +++ T+L LK F LA
Sbjct: 58 VFFGQLRAAEMEHLLERSW-YAVTE-TCLAFTVFRDDFSPRFVALF-TLLLFLKCFHWLA 114
Query: 72 RDRLERLNASPSATPWTY-FRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFE 128
DR++ + SP+ + W + FR+ + +L + +D F++ T +S+ L+ FE
Sbjct: 115 EDRVDFMERSPNIS-WLFHFRILALMLLLGVLDAFFVSHAYNSLVTRGASVQLVFGFE 171
>UNIPROTKB|Q6NRL6 [details] [associations]
symbol:syvn1-a "E3 ubiquitin-protein ligase synoviolin A"
species:8355 "Xenopus laevis" [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0016874 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 KO:K10601 HOVERGEN:HBG094015 EMBL:BC070731
RefSeq:NP_001084825.1 UniGene:Xl.18945 ProteinModelPortal:Q6NRL6
GeneID:431869 KEGG:xla:431869 CTD:431869 Xenbase:XB-GENE-1005365
Uniprot:Q6NRL6
Length = 605
Score = 198 (74.8 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 54/151 (35%), Positives = 76/151 (50%)
Query: 234 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACL 292
K + I R A+ +++ PDAT+EEL+A D+ C ICRE M AK+L CNH+FH +CL
Sbjct: 251 KAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCL 310
Query: 293 RSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQ--LARQLSMGLDRQNN-- 348
RSW + +CPTCR + + + P E + Q +Q + + Q N
Sbjct: 311 RSWFQR----QQTCPTCRMDVLRASLPTQPQT-PTEQQNQHQNQAQQQPTPVIPPQPNFP 365
Query: 349 TG--QTLPTGVFPNQTQ----PPVEGSPWRN 373
G P G+FP PPV G+P N
Sbjct: 366 PGILPPFPPGMFPLWPPMGPFPPVPGAPGGN 396
Score = 100 (40.3 bits), Expect = 3.1e-18, Sum P(2) = 3.1e-18
Identities = 33/118 (27%), Positives = 59/118 (50%)
Query: 12 IFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALA 71
+FFG+L AE +ER Y + + T L + F +++ T+L LK F LA
Sbjct: 58 VFFGQLRAAEMEHLLERSW-YAVTE-TCLAFTVFRDDFSPRFVALF-TLLLFLKCFHWLA 114
Query: 72 RDRLERLNASPSATPWTY-FRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFE 128
DR++ + SP+ + W + FR+ + +L + +D F++ +S+ L+ FE
Sbjct: 115 EDRVDFMERSPNIS-WLFHFRILALMLLLGVLDAFFVSHAYHSLVIRGASVQLVFGFE 171
>ZFIN|ZDB-GENE-030131-7166 [details] [associations]
symbol:syvn1 "synovial apoptosis inhibitor 1,
synoviolin" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISS] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
ZFIN:ZDB-GENE-030131-7166 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279 eggNOG:COG5243
HSSP:Q9H0F5 HOGENOM:HOG000294196 KO:K10601 EMBL:BC044465
EMBL:BC066677 IPI:IPI00498211 RefSeq:NP_997900.1 UniGene:Dr.75288
ProteinModelPortal:Q803I8 STRING:Q803I8 GeneID:335226
KEGG:dre:335226 CTD:84447 HOVERGEN:HBG094015 InParanoid:Q803I8
NextBio:20810730 ArrayExpress:Q803I8 Uniprot:Q803I8
Length = 625
Score = 190 (71.9 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 56/170 (32%), Positives = 82/170 (48%)
Query: 234 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACL 292
K + I R A+ +++ PDAT E+L+A D+ C ICRE M AKKL CNH+FH +CL
Sbjct: 257 KAVTDAIMSRRAIRNMNTLYPDATPEDLQATDNVCIICREEMVTGAKKLPCNHIFHSSCL 316
Query: 293 RSWLDQGLNEMYSCPTCRKPLFVGRRE--------IEANSRPGEVSSDEQLARQLSMGLD 344
RSW + +CPTCR + + +A + P ++ ++ G+
Sbjct: 317 RSWFQR----QQTCPTCRMDVLRASQPNQTPAPPAAQAPAPPAPANAPIPPPVNVAPGMI 372
Query: 345 RQNNTGQTLPTGVFPNQTQPPVEGSPWRNAGLDSSWLHAWPSQGVD-GAG 393
Q G G FP P V G+P A D+ + +QG + GAG
Sbjct: 373 PQFPPGLFPFWGPFPGAPPPAVPGAP--AAPTDTPQPSSDGAQGAESGAG 420
Score = 107 (42.7 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 34/121 (28%), Positives = 61/121 (50%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQ 68
++ +FFG+L AE +ER Y + + T L + F +++ T+L LK F
Sbjct: 61 MRKVFFGQLRAAEMEHLIERSW-YAVTE-TCLAFTVFRDDFSPRFVALF-TLLLFLKCFH 117
Query: 69 ALARDRLERLNASPSATPWTY-FRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFF 127
LA DR++ + SP+ + W + FRV S ++ + +D ++ T +S+ L+ F
Sbjct: 118 WLAEDRVDFMERSPNIS-WVFHFRVLSLMVLLGVMDFLFVNHACHSIITRGASVQLVFGF 176
Query: 128 E 128
E
Sbjct: 177 E 177
>MGI|MGI:1921376 [details] [associations]
symbol:Syvn1 "synovial apoptosis inhibitor 1, synoviolin"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0006986 "response to unfolded protein" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=ISO] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISO] [GO:0030433 "ER-associated protein
catabolic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 MGI:MGI:1921376 Prosite:PS00518
GO:GO:0005783 GO:GO:0016021 GO:GO:0005634 GO:GO:0043066
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 GO:GO:0001701
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 GO:GO:0004842 eggNOG:COG5243
GeneTree:ENSGT00530000062938 GO:GO:0000151 GO:GO:0006986
HOGENOM:HOG000294196 KO:K10601 CTD:84447 HOVERGEN:HBG094015
ChiTaRS:SYVN1 EMBL:AK122558 EMBL:AK004688 EMBL:BC042199
EMBL:BC046829 EMBL:BC057917 EMBL:BC080722 IPI:IPI00387479
IPI:IPI01008384 RefSeq:NP_001158181.1 RefSeq:NP_083045.4
UniGene:Mm.149870 ProteinModelPortal:Q9DBY1 SMR:Q9DBY1
IntAct:Q9DBY1 MINT:MINT-1662447 STRING:Q9DBY1 PhosphoSite:Q9DBY1
PaxDb:Q9DBY1 PRIDE:Q9DBY1 Ensembl:ENSMUST00000134667
Ensembl:ENSMUST00000138532 GeneID:74126 KEGG:mmu:74126
UCSC:uc008ggm.2 InParanoid:Q9DBY1 NextBio:339846 Bgee:Q9DBY1
CleanEx:MM_SYVN1 Genevestigator:Q9DBY1 Uniprot:Q9DBY1
Length = 612
Score = 213 (80.0 bits), Expect = 4.0e-14, P = 4.0e-14
Identities = 89/327 (27%), Positives = 142/327 (43%)
Query: 59 TVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAV-DIFWIRMCLLLFKTL 117
T+L LK F LA DR++ + SP+ + W + +L+F+L + D ++ T
Sbjct: 108 TLLLFLKCFHWLAEDRVDFMERSPNIS-WLFHCRIVSLMFLLGILDFLFVSHAYHSILTR 166
Query: 118 DSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDTLAAGSLL 177
+S+ L+ FE + + + + +D+ S N A + L G +
Sbjct: 167 GASVQLVFGFEYAILMTMVLTIFIKYVLHSVDL---QSENPWDNKAVYMLYTELFTGFI- 222
Query: 178 EWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIK 237
K +L ++ T+++ + H ++ +R M +L +R A+ I
Sbjct: 223 --KVLL------YMAFMTIMIKV-HTFPLFAIRPM---------YLAMRQFKKAVTDAIM 264
Query: 238 GFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACLRSWL 296
R A+ +++ PDAT EEL+A D+ C ICRE M AK+L CNH+FH +CLRSW
Sbjct: 265 S----RRAIRNMNTLYPDATPEELQAVDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWF 320
Query: 297 DQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDE--QLARQLSMGLDRQNNTGQTL- 353
+ +CPTCR + R + A S P +D+ A L + N Q L
Sbjct: 321 QR----QQTCPTCRMDVL--RASLPAQSPPPPEPADQGPPPAPHPQPLLPQPPNFPQGLL 374
Query: 354 ------------PTGVFPNQTQPPVEG 368
P G FP PP G
Sbjct: 375 PPFPPGMFPLWPPMGPFPPVPPPPSSG 401
Score = 196 (74.1 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 54/144 (37%), Positives = 73/144 (50%)
Query: 234 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACL 292
K + I R A+ +++ PDAT EEL+A D+ C ICRE M AK+L CNH+FH +CL
Sbjct: 257 KAVTDAIMSRRAIRNMNTLYPDATPEELQAVDNVCIICREEMVTGAKRLPCNHIFHTSCL 316
Query: 293 RSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDE--QLARQLSMGLDRQNNTG 350
RSW + +CPTCR + R + A S P +D+ A L + N
Sbjct: 317 RSWFQR----QQTCPTCRMDVL--RASLPAQSPPPPEPADQGPPPAPHPQPLLPQPPNFP 370
Query: 351 QTL----PTGVFPNQTQPPVEGSP 370
Q L P G+FP PP+ P
Sbjct: 371 QGLLPPFPPGMFP--LWPPMGPFP 392
Score = 95 (38.5 bits), Expect = 1.8e-17, Sum P(2) = 1.8e-17
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 12 IFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALA 71
+FFG+L AE +ER Y + + T L + F +++ T+L LK F LA
Sbjct: 64 VFFGQLRAAEMEHLLERSW-YAVTE-TCLAFTVFRDDFSPRFVALF-TLLLFLKCFHWLA 120
Query: 72 RDRLERLNASPSATPWTYFRVFSALLFVLAV-DIFWIRMCLLLFKTLDSSMFLLLFFE 128
DR++ + SP+ + W + +L+F+L + D ++ T +S+ L+ FE
Sbjct: 121 EDRVDFMERSPNIS-WLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFE 177
>UNIPROTKB|E1BAK9 [details] [associations]
symbol:SYVN1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0016881
GeneTree:ENSGT00530000062938 OMA:NIHHYLS EMBL:DAAA02063552
IPI:IPI00688216 PRIDE:E1BAK9 Ensembl:ENSBTAT00000006699
Uniprot:E1BAK9
Length = 611
Score = 194 (73.4 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 60/182 (32%), Positives = 82/182 (45%)
Query: 234 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACL 292
K + I R A+ +++ PDAT EEL+A D+ C ICRE M AK+L CNH+FH +CL
Sbjct: 257 KAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCL 316
Query: 293 RSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDE--QLARQLSMGLDRQNNTG 350
RSW + +CPTCR + R + S P +D+ A L + N
Sbjct: 317 RSWFQR----QQTCPTCRMDVL--RASLPTQSPPPPEPADQGPPPAPHAPPLLPQPPNFP 370
Query: 351 QTL----PTGVFPNQTQ----PPVEGSPWRNAGLDSSWLHAWPSQGVDGAGPSTAMRSVG 402
Q L P G+FP PPV P + A +GA +TA +
Sbjct: 371 QGLLPPFPPGMFPLWPPMGPFPPVPPPPGSGEAVAPPSTSAAALSRPNGAATTTAATAAS 430
Query: 403 LS 404
S
Sbjct: 431 AS 432
Score = 95 (38.5 bits), Expect = 3.0e-17, Sum P(2) = 3.0e-17
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 12 IFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALA 71
+FFG+L AE +ER Y + + T L + F +++ T+L LK F LA
Sbjct: 64 VFFGQLRAAEMEHLLERSW-YAVTE-TCLAFTVFRDDFSPRFVALF-TLLLFLKCFHWLA 120
Query: 72 RDRLERLNASPSATPWTYFRVFSALLFVLAV-DIFWIRMCLLLFKTLDSSMFLLLFFE 128
DR++ + SP+ + W + +L+F+L + D ++ T +S+ L+ FE
Sbjct: 121 EDRVDFMERSPNIS-WLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFE 177
>UNIPROTKB|I3LGG8 [details] [associations]
symbol:SYVN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0016881
GeneTree:ENSGT00530000062938 KO:K10601 OMA:NIHHYLS CTD:84447
EMBL:CU457406 RefSeq:XP_003122589.1 UniGene:Ssc.53723
Ensembl:ENSSSCT00000027683 GeneID:100514334 KEGG:ssc:100514334
Uniprot:I3LGG8
Length = 610
Score = 192 (72.6 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 61/178 (34%), Positives = 83/178 (46%)
Query: 234 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACL 292
K + I R A+ +++ PDAT+EEL+A D+ C ICRE M AK+L CNH+FH +CL
Sbjct: 257 KAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCL 316
Query: 293 RSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDE--QLARQLSMGLDRQNNTG 350
RSW + +CPTCR + R + S P +D+ A L + N
Sbjct: 317 RSWFQR----QQTCPTCRMDVL--RASLPNQSPPPPEPADQGPPPAPHPPPLLPQPPNFP 370
Query: 351 QTL----PTGVFPNQTQPPVEGSPWRNAGLDSSWLHAWPSQGVDGAGPSTAMRSVGLS 404
Q L P G+FP PP+ P S A PS + PS A + S
Sbjct: 371 QGLLPPFPPGMFP--LWPPMGPFPPVPPPPSSGEAAAPPSTSAALSRPSGAATTTAAS 426
Score = 95 (38.5 bits), Expect = 4.9e-17, Sum P(2) = 4.9e-17
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 12 IFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALA 71
+FFG+L AE +ER Y + + T L + F +++ T+L LK F LA
Sbjct: 64 VFFGQLRAAEMEHLLERSW-YAVTE-TCLAFTVFRDDFSPRFVALF-TLLLFLKCFHWLA 120
Query: 72 RDRLERLNASPSATPWTYFRVFSALLFVLAV-DIFWIRMCLLLFKTLDSSMFLLLFFE 128
DR++ + SP+ + W + +L+F+L + D ++ T +S+ L+ FE
Sbjct: 121 EDRVDFMERSPNIS-WLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFE 177
>DICTYBASE|DDB_G0279345 [details] [associations]
symbol:amfr "putative E3 ubiquitin-protein ligase"
species:44689 "Dictyostelium discoideum" [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR026608 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
dictyBase:DDB_G0279345 GenomeReviews:CM000152_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
eggNOG:COG5243 KO:K10636 PANTHER:PTHR12477:SF4 EMBL:AAFI02000030
ProtClustDB:CLSZ2846663 RefSeq:XP_641804.1
ProteinModelPortal:Q54WX3 EnsemblProtists:DDB0237524 GeneID:8622001
KEGG:ddi:DDB_G0279345 InParanoid:Q54WX3 OMA:LPNTHAK Uniprot:Q54WX3
Length = 679
Score = 218 (81.8 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 59/209 (28%), Positives = 102/209 (48%)
Query: 107 IRMCLLLFKTLDSSMFLLLFFEPLSVAF-ETMQAILVHGFQLLDIWLHHSAGNSTNCARS 165
+++ +LL L S L+ F+ ++ F E + +++ F+ I+ T S
Sbjct: 155 LKLLMLLVGILISD--LIWFYFSITYFFGEGLSNLMLLNFECFTIFFETV---QTLIKYS 209
Query: 166 -KFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLN 224
FD L++ + + +G I F D L H IHI ++G L+ ++F
Sbjct: 210 IHLFD-LSSEDVWDKRGQYIYYTEFSTDSVILAGTCAHLIHIIIIQGFTPTLLHVVMFFY 268
Query: 225 IRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCN 284
+ + + ++I + + P+ ++L Y+D+CAICR+ M AKKL C
Sbjct: 269 FKMVFGNLNRKITAYRNYCKLTSDMDNCYPNVGEKDLENYNDDCAICRDRMVTAKKLPCG 328
Query: 285 HLFHLACLRSWLDQGLNEMYSCPTCRKPL 313
H+FH +CLR+WL+Q +SCPTCR+ L
Sbjct: 329 HIFHHSCLRAWLEQH----HSCPTCRRSL 353
Score = 211 (79.3 bits), Expect = 3.1e-14, Sum P(2) = 3.1e-14
Identities = 46/151 (30%), Positives = 78/151 (51%)
Query: 1 MVLVSDFPLQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTV 60
+++ F +Q +FFG+L E R F +RL YV+ K F+ P + +W W ++
Sbjct: 66 LIVFGKF-IQYLFFGQLRDIEARNFNDRLWTYVVSKLIFIFAAKEPELGSLLVWGFWFSI 124
Query: 61 LCSLKMFQALARDRLERLNAS-PSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDS 119
LC LK+F L+RDR + LN P+ + ++ L+ +L D+ W + F
Sbjct: 125 LCCLKLFSLLSRDRFDYLNTFLPNTHAKIHLKLLMLLVGILISDLIWFYFSITYFFGEGL 184
Query: 120 SMFLLLFFEPLSVAFETMQAILVHGFQLLDI 150
S +LL FE ++ FET+Q ++ + L D+
Sbjct: 185 SNLMLLNFECFTIFFETVQTLIKYSIHLFDL 215
Score = 49 (22.3 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 477 NILAMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
N++ A + + ++ I DL +TN+ T++N+L+
Sbjct: 436 NLVYNANYIHGLFENISTQTIQNDLLQTNNVNRTIDNILE 475
>UNIPROTKB|E2RSJ2 [details] [associations]
symbol:SYVN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043066 "negative regulation of apoptotic
process" evidence=IEA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IEA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=IEA] [GO:0016881 "acid-amino acid ligase
activity" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0016881
GeneTree:ENSGT00530000062938 OMA:RTPTVNS EMBL:AAEX03011641
Ensembl:ENSCAFT00000022084 Uniprot:E2RSJ2
Length = 776
Score = 218 (81.8 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 89/329 (27%), Positives = 142/329 (43%)
Query: 59 TVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAV-DIFWIRMCLLLFKTL 117
T+L LK F LA DR++ + SP+ + W + +L+F+L + D ++ T
Sbjct: 273 TLLLFLKCFHWLAEDRVDFMERSPNIS-WLFHCRIVSLMFLLGILDFLFVSHAYHSILTR 331
Query: 118 DSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDTLAAGSLL 177
+S+ L+ FE + + + + +D+ S N A + L G +
Sbjct: 332 GASVQLVFGFEYAILMTMVLTIFIKYVLHSVDL---QSENPWDNKAVYMLYTELFTGFI- 387
Query: 178 EWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIK 237
K +L ++ T+++ + H ++ +R M +L +R A+ I
Sbjct: 388 --KVLL------YMAFMTIMIKV-HTFPLFAIRPM---------YLAMRQFKKAVTDAIM 429
Query: 238 GFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACLRSWL 296
R A+ +++ PDAT EEL+A D+ C ICRE M AK+L CNH+FH +CLRSW
Sbjct: 430 S----RRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWF 485
Query: 297 DQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDE--QLARQLSMGLDRQNNTGQTL- 353
+ +CPTCR + R + S P +D+ A L + N Q L
Sbjct: 486 QR----QQTCPTCRMDVL--RASLPTQSPPPPEPADQGPPAAAHPPPLLPQPPNFPQGLL 539
Query: 354 ------------PTGVFPNQTQPPVEGSP 370
P G FP PP G P
Sbjct: 540 PPFPPGMFPLWPPMGPFPPVPPPPSSGEP 568
>UNIPROTKB|Q86TM6 [details] [associations]
symbol:SYVN1 "E3 ubiquitin-protein ligase synoviolin"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;IDA] [GO:0016881
"acid-amino acid ligase activity" evidence=IDA] [GO:0018279
"protein N-linked glycosylation via asparagine" evidence=IMP]
[GO:0005789 "endoplasmic reticulum membrane" evidence=TAS]
[GO:0006987 "activation of signaling protein activity involved in
unfolded protein response" evidence=TAS] [GO:0030968 "endoplasmic
reticulum unfolded protein response" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 EMBL:AB085847 Prosite:PS00518 GO:GO:0016021
GO:GO:0005634 Reactome:REACT_116125 GO:GO:0006987 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 GO:GO:0001701 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0018279
HSSP:Q9LRB7 GO:GO:0016881 eggNOG:COG5243 HOGENOM:HOG000294196
KO:K10601 CTD:84447 HOVERGEN:HBG094015 EMBL:AB024690 EMBL:AF317634
EMBL:AB058713 EMBL:AL834262 EMBL:BC030530 IPI:IPI00166996
IPI:IPI00172510 IPI:IPI00396584 RefSeq:NP_115807.1
RefSeq:NP_757385.1 UniGene:Hs.75859 ProteinModelPortal:Q86TM6
SMR:Q86TM6 IntAct:Q86TM6 MINT:MINT-4052103 STRING:Q86TM6
PhosphoSite:Q86TM6 DMDM:134035039 PaxDb:Q86TM6 PRIDE:Q86TM6
DNASU:84447 Ensembl:ENST00000294256 Ensembl:ENST00000307289
Ensembl:ENST00000377190 Ensembl:ENST00000526060 GeneID:84447
KEGG:hsa:84447 UCSC:uc001odb.3 UCSC:uc001odc.3 UCSC:uc009yqc.3
GeneCards:GC11M064894 HGNC:HGNC:20738 HPA:HPA005480 HPA:HPA024300
MIM:608046 neXtProt:NX_Q86TM6 PharmGKB:PA128394735
InParanoid:Q86TM6 ChiTaRS:SYVN1 GenomeRNAi:84447 NextBio:74217
ArrayExpress:Q86TM6 Bgee:Q86TM6 CleanEx:HS_SYVN1
Genevestigator:Q86TM6 Uniprot:Q86TM6
Length = 617
Score = 212 (79.7 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 89/327 (27%), Positives = 142/327 (43%)
Query: 59 TVLCSLKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAV-DIFWIRMCLLLFKTL 117
T+L LK F LA DR++ + SP+ + W + +L+F+L + D ++ T
Sbjct: 108 TLLLFLKCFHWLAEDRVDFMERSPNIS-WLFHCRIVSLMFLLGILDFLFVSHAYHSILTR 166
Query: 118 DSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNCARSKFFDTLAAGSLL 177
+S+ L+ FE + + + + +D+ S N A + L G +
Sbjct: 167 GASVQLVFGFEYAILMTMVLTIFIKYVLHSVDL---QSENPWDNKAVYMLYTELFTGFI- 222
Query: 178 EWKGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIK 237
K +L ++ T+++ + H ++ +R M +L +R A+ I
Sbjct: 223 --KVLL------YMAFMTIMIKV-HTFPLFAIRPM---------YLAMRQFKKAVTDAIM 264
Query: 238 GFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACLRSWL 296
R A+ +++ PDAT EEL+A D+ C ICRE M AK+L CNH+FH +CLRSW
Sbjct: 265 S----RRAIRNMNTLYPDATPEELQAMDNVCIICREEMVTGAKRLPCNHIFHTSCLRSWF 320
Query: 297 DQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDE--QLARQLSMGLDRQNNTGQTL- 353
+ +CPTCR + R + A S P +D+ A L + N Q L
Sbjct: 321 QR----QQTCPTCRMDVL--RASLPAQSPPPPEPADQGPPPAPHPPPLLPQPPNFPQGLL 374
Query: 354 ------------PTGVFPNQTQPPVEG 368
P G FP PP G
Sbjct: 375 PPFPPGMFPLWPPMGPFPPVPPPPSSG 401
>ASPGD|ASPL0000044630 [details] [associations]
symbol:AN1488 species:162425 "Emericella nidulans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0010620 "negative regulation of
transcription by transcription factor catabolism" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0030433
"ER-associated protein catabolic process" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 EMBL:BN001307 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5243 EMBL:AACD01000022 KO:K10601
OrthoDB:EOG4W3WW9 RefSeq:XP_659092.1 ProteinModelPortal:Q5BD92
EnsemblFungi:CADANIAT00008111 GeneID:2875340 KEGG:ani:AN1488.2
HOGENOM:HOG000157817 OMA:GWIGEGR Uniprot:Q5BD92
Length = 775
Score = 165 (63.1 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 44/146 (30%), Positives = 73/146 (50%)
Query: 189 FFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGH 248
F+LD+ T + L Y+ + + F+ + + ++ + + +RI F + R A
Sbjct: 265 FYLDLLTDFLKLTVYLTFFAIL-FTFYGLPIHILRDVVVTIRSFGRRIMDFARYRNATRD 323
Query: 249 LHAALPDATSEELRAYDDECAICREPMA----------------KAKKLLCNHLFHLACL 292
++ PDA++EE+ A ++ C ICRE M + KKL C H+ H +CL
Sbjct: 324 MNDRYPDASAEEV-AREEVCIICREEMTHWQPGDRPVSRVSERLRPKKLPCGHILHFSCL 382
Query: 293 RSWLDQGLNEMYSCPTCRKPLFVGRR 318
RSWL++ N CPTCR+P+ R
Sbjct: 383 RSWLERQQN----CPTCRRPVIAPPR 404
Score = 101 (40.6 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 36/152 (23%), Positives = 70/152 (46%)
Query: 7 FPLQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSL-- 64
F LQ + +G L P ET + E+ + T L + T+F+ L + +L + SL
Sbjct: 58 FWLQRLLYGPLRPIETEQLYEKA--WFAVTETCLAM----TIFRGELGAWFLVMFVSLLV 111
Query: 65 -KMFQALARDRLERLNASPSATPWTYF-RVFSALLFVLAVDIFWIRMCL-LLFKTLDSSM 121
K++ + R+E L P A P + R+ +LL + DIF ++ C+ + + M
Sbjct: 112 GKVWGWIGEGRVEFLEQQPPANPLLFHTRLVVSLLLSVMFDIFMLKYCIDTVLEQARPDM 171
Query: 122 FLLLFFEPLSVAFETMQAILVHGFQLLDIWLH 153
++ FE + + + L++I+++
Sbjct: 172 MVMFGFEFAVLTILSTSTAARYSISLVEIYIN 203
Score = 37 (18.1 bits), Expect = 7.7e-14, Sum P(3) = 7.7e-14
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 325 RPGEVSSDEQLARQLSMGLDRQNNTGQTLPTGVFPNQTQP 364
+PG ++ + ARQ+ G Q P P TQP
Sbjct: 480 QPG-MNPNPAGARQIGFGFGFGRPPLQQAPAPAAPAATQP 518
>FB|FBgn0039875 [details] [associations]
symbol:sip3 "septin interacting protein 3" species:7227
"Drosophila melanogaster" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016881 "acid-amino acid ligase activity"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0016021 "integral
to membrane" evidence=ISM] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IGI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0005783 EMBL:AE014297 GO:GO:0016021 GO:GO:0005789
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0030433 GO:GO:0004842 eggNOG:COG5243 GO:GO:0030968
GeneTree:ENSGT00530000062938 KO:K10601 EMBL:AY060677
RefSeq:NP_651894.3 UniGene:Dm.1395 ProteinModelPortal:Q95SP2
SMR:Q95SP2 MINT:MINT-990774 STRING:Q95SP2 PaxDb:Q95SP2 PRIDE:Q95SP2
EnsemblMetazoa:FBtr0085842 EnsemblMetazoa:FBtr0330113 GeneID:43747
KEGG:dme:Dmel_CG1937 FlyBase:FBgn0039875 InParanoid:Q95SP2
OMA:RTPTVNS OrthoDB:EOG4NK9B2 PhylomeDB:Q95SP2 ChiTaRS:sip3
GenomeRNAi:43747 NextBio:835578 Bgee:Q95SP2 Uniprot:Q95SP2
Length = 626
Score = 180 (68.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 55/166 (33%), Positives = 76/166 (45%)
Query: 234 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK-AKKLLCNHLFHLACL 292
K + I R A+ +++ PDAT EELR D+ C ICRE M +KKL C H+FH CL
Sbjct: 255 KALNDVIMSRRAIRNMNTLYPDATPEELRQSDNICIICREDMVNHSKKLPCGHIFHTTCL 314
Query: 293 RSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQT 352
RSW + +CPTCR + R NS DE +A + G G
Sbjct: 315 RSWFQR----QQTCPTCRLNIL---RTPTVNSTAMPRQGDEAVAA--AAGNPIPAAAGVQ 365
Query: 353 LPTGVFPNQTQPPVEGSPWRNAGLDSSWLHAWPSQGVDGAGPSTAM 398
GV P V+G+ R A ++ + A P D G ++ +
Sbjct: 366 PAGGVPPPAPTAVVDGNQAR-ADVNVAGGQALPPNFADLFGDASGL 410
Score = 75 (31.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 29/94 (30%), Positives = 43/94 (45%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQ 68
L IF G L AE +ER Y + + T L + F +++ TVL LK F
Sbjct: 59 LSKIFLGTLRAAEFEHLLERFW-YALTE-TCLAFTVFRDDFNPRFVALF-TVLLFLKSFH 115
Query: 69 ALARDRLERLNASPSATPWTYFRVFSALLFVLAV 102
LA +R++ + SP W + +LL VL +
Sbjct: 116 WLAEERVDFMERSP-VLGWLFHIRVGSLLTVLGI 148
>WB|WBGene00004768 [details] [associations]
symbol:sel-11 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0008593 "regulation of Notch
signaling pathway" evidence=IGI] [GO:0035264 "multicellular
organism growth" evidence=IGI] [GO:0010468 "regulation of gene
expression" evidence=IMP] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0035264 HSSP:Q9LRB7 eggNOG:COG5243
GeneTree:ENSGT00530000062938 GO:GO:0010468 GO:GO:0008593
EMBL:Z72511 PIR:T22687 RefSeq:NP_505969.1 ProteinModelPortal:Q20798
SMR:Q20798 DIP:DIP-26690N IntAct:Q20798 MINT:MINT-212290
STRING:Q20798 PaxDb:Q20798 EnsemblMetazoa:F55A11.3.1
EnsemblMetazoa:F55A11.3.2 GeneID:179612 KEGG:cel:CELE_F55A11.3
UCSC:F55A11.3 CTD:179612 WormBase:F55A11.3 HOGENOM:HOG000294196
InParanoid:Q20798 KO:K10601 OMA:NIHHYLS NextBio:906150
Uniprot:Q20798
Length = 610
Score = 168 (64.2 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 47/157 (29%), Positives = 76/157 (48%)
Query: 180 KGILIRNFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAILFL-NIRALLSAIIKRIKG 238
K + + F+++ L+ G + + LR F L F ++RAL A + I
Sbjct: 209 KAVYLLYAELFINLIRCLL-YGFFAVVM-LRVHTFPLFSVRPFYQSVRALHKAFLDVILS 266
Query: 239 FIKLRIALGHLHAALPDATSEELRAYDDECAICREPM---AKAKKLLCNHLFHLACLRSW 295
R A+ +++ P ++E+L A D C ICRE M A K+L C+H+FH CLRSW
Sbjct: 267 ----RRAINAMNSQFPVVSAEDLAAMDATCIICREEMTVDASPKRLPCSHVFHAHCLRSW 322
Query: 296 LDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSD 332
+ +CPTCR ++ GR A + +++
Sbjct: 323 FQR----QQTCPTCRTDIWQGRNGAAAGGNAADAAAN 355
Score = 81 (33.6 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 31/120 (25%), Positives = 54/120 (45%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQ 68
L++I FG+L AE ER + V+ T L + F A ++ + L +K F
Sbjct: 62 LKSILFGDLRAAEAEHLSERTWHAVLE--TCLAFTVFRDDFSA-IFVMQFIGLLFIKCFH 118
Query: 69 ALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFE 128
LA DR++ + SP T + R+ + L + D +++ T +S ++ FE
Sbjct: 119 WLADDRVDMMERSPVITLRFHLRMMTVLAALGFADSYFVSSAYFTTITRGASAQIVFGFE 178
Score = 37 (18.1 bits), Expect = 1.4e-12, Sum P(3) = 1.4e-12
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 354 PTGVFPNQTQPPV 366
P G+FP PP+
Sbjct: 437 PPGMFPMMPPPPL 449
>UNIPROTKB|A8WWR3 [details] [associations]
symbol:hrdl-1 "E3 ubiquitin-protein ligase hrd-like protein
1" species:6238 "Caenorhabditis briggsae" [GO:1901214 "regulation
of neuron death" evidence=ISS] InterPro:IPR001841
InterPro:IPR003892 Pfam:PF02845 Pfam:PF13639 PROSITE:PS50089
PROSITE:PS51140 SMART:SM00184 SMART:SM00546 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 KO:K10636 EMBL:HE600906 GO:GO:1901214
RefSeq:XP_002639237.1 ProteinModelPortal:A8WWR3 STRING:A8WWR3
EnsemblMetazoa:CBG03795 GeneID:8581231 KEGG:cbr:CBG03795
CTD:8581231 WormBase:CBG03795 eggNOG:NOG288143 HOGENOM:HOG000112950
OMA:FRSTYIL Uniprot:A8WWR3
Length = 578
Score = 122 (48.0 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 37/146 (25%), Positives = 70/146 (47%)
Query: 168 FDTLAAGSLLEWKGILIRNFGFFLDMAT-LLMALGHYIHIWWLRGMAFHL-VDAILFL-N 224
F +++ + + +R+F ++L++AT L ++ L A L + +I FL +
Sbjct: 250 FRCISSSRVFSFNPDSVRHFNYWLELATNFACELLQFLSYAQLFVFAPGLNLTSIFFLYH 309
Query: 225 IRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCN 284
++ + + +++ + H+ +A P + DD C +C E + +++L C+
Sbjct: 310 MKLTYNCMREQLGRHRTHKKIFEHIESAYPSVKAANS---DDRCIVCWELLGTSRRLPCS 366
Query: 285 HLFHLACLRSWLDQGLNEMYSCPTCR 310
H FH CL WL Q SCPTCR
Sbjct: 367 HQFHDWCLMWWLAQDS----SCPTCR 388
Score = 84 (34.6 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 460 GGAHARSTSRSANENIANILAMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
G + R+A + +M ETV E+ P M + I DL+++ SA T+ N+L+
Sbjct: 430 GSSFGNIFGRAAEPTQEQLQSMLETVLEMFPQMSPETILADLRQSGSAQSTIENILE 486
Score = 61 (26.5 bits), Expect = 2.6e-10, Sum P(3) = 2.6e-10
Identities = 31/124 (25%), Positives = 50/124 (40%)
Query: 14 FGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGL-WSVWLTVLCSLKMFQALAR 72
F EL E + ++Y++ +L +V P + W +W V L Q +
Sbjct: 125 FKELSRQEEVAARQAFLSYILLTIVYLSVVTGPQKGHRVMPWMIWGGVCGFLSHLQFVTC 184
Query: 73 DRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSV 132
RL+ SPS + RV LF+ V I M + L+ +LL+F+ L
Sbjct: 185 QRLKY--TSPSCDRGSQ-RVSFISLFLFFVSIAMTFMVSRFQQHLEWQPAVLLYFDCLLA 241
Query: 133 AFET 136
F +
Sbjct: 242 VFRS 245
>WB|WBGene00009164 [details] [associations]
symbol:hrdl-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] [GO:0035264 "multicellular organism growth"
evidence=IGI] InterPro:IPR001841 InterPro:IPR003892 Pfam:PF02845
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184
SMART:SM00546 Prosite:PS00518 GO:GO:0016021 GO:GO:0009792
GO:GO:0006915 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0035264 KO:K10636
GeneTree:ENSGT00530000062938 GO:GO:1901214 EMBL:Z81070
eggNOG:NOG288143 HOGENOM:HOG000112950 OMA:FRSTYIL EMBL:Z81075
PIR:T21423 RefSeq:NP_492602.1 ProteinModelPortal:P90859 SMR:P90859
STRING:P90859 EnsemblMetazoa:F26E4.11 GeneID:172833
KEGG:cel:CELE_F26E4.11 CTD:172833 WormBase:F26E4.11
InParanoid:P90859 NextBio:877187 Uniprot:P90859
Length = 564
Score = 119 (46.9 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 40/171 (23%), Positives = 80/171 (46%)
Query: 168 FDTLAAGSLLEWKGILIRNFGFFLDMAT-LLMALGHYIHIWWLRGMAFHL-VDAILFL-N 224
F +++ + + +R+F ++L++ T + L + L + L + +I FL +
Sbjct: 235 FRCISSSRVFSFNPDSVRHFNYWLELITNFVCELIQMLSFAQLLAFSPGLNLTSIFFLYH 294
Query: 225 IRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCN 284
++ + + +++ + H+ + P S + DD C +C E + +++L C+
Sbjct: 295 MKLTYNCMTEQLSRHRNHKKIFEHIERSYP---SVKCANGDDRCVVCWELLGTSRRLPCS 351
Query: 285 HLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 335
H FH CL WL Q SCPTCR + + +I +P EV + +L
Sbjct: 352 HQFHDWCLMWWLAQDS----SCPTCRCTIPSPQDQIR---QPPEVGNSTRL 395
Score = 88 (36.0 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 469 RSANENIANILAMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
R+A + M E VRE+ P M D+I DL+++ SA T+ N+L+
Sbjct: 424 RAAEPTEEQLQTMLEQVREMFPQMSVDIIMTDLRQSGSAQSTIENILE 471
Score = 58 (25.5 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 29/124 (23%), Positives = 48/124 (38%)
Query: 14 FGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGL-WSVWLTVLCSLKMFQALAR 72
F EL E + YV+ +L +VI P + W +W + L Q +
Sbjct: 110 FKELARQEENVARQAFFCYVLLTIVYLSVVIGPQKGHRVMPWMIWGGICAFLSHLQFITC 169
Query: 73 DRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSV 132
RL+ + SPS + ++ LF+ V I + L +LL+F+ L
Sbjct: 170 QRLKHI--SPSCDRGSQ-KISFLSLFLFFVSIAMTFLISRFQHHLTWQPAVLLYFDCLLA 226
Query: 133 AFET 136
F +
Sbjct: 227 VFRS 230
>UNIPROTKB|P90859 [details] [associations]
symbol:hrdl-1 "E3 ubiquitin-protein ligase hrd-like protein
1" species:6239 "Caenorhabditis elegans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:1901214 "regulation of neuron death" evidence=IMP]
InterPro:IPR001841 InterPro:IPR003892 Pfam:PF02845 Pfam:PF13639
PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184 SMART:SM00546
Prosite:PS00518 GO:GO:0016021 GO:GO:0009792 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0035264 KO:K10636 GeneTree:ENSGT00530000062938 GO:GO:1901214
EMBL:Z81070 eggNOG:NOG288143 HOGENOM:HOG000112950 OMA:FRSTYIL
EMBL:Z81075 PIR:T21423 RefSeq:NP_492602.1 ProteinModelPortal:P90859
SMR:P90859 STRING:P90859 EnsemblMetazoa:F26E4.11 GeneID:172833
KEGG:cel:CELE_F26E4.11 CTD:172833 WormBase:F26E4.11
InParanoid:P90859 NextBio:877187 Uniprot:P90859
Length = 564
Score = 119 (46.9 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 40/171 (23%), Positives = 80/171 (46%)
Query: 168 FDTLAAGSLLEWKGILIRNFGFFLDMAT-LLMALGHYIHIWWLRGMAFHL-VDAILFL-N 224
F +++ + + +R+F ++L++ T + L + L + L + +I FL +
Sbjct: 235 FRCISSSRVFSFNPDSVRHFNYWLELITNFVCELIQMLSFAQLLAFSPGLNLTSIFFLYH 294
Query: 225 IRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCN 284
++ + + +++ + H+ + P S + DD C +C E + +++L C+
Sbjct: 295 MKLTYNCMTEQLSRHRNHKKIFEHIERSYP---SVKCANGDDRCVVCWELLGTSRRLPCS 351
Query: 285 HLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 335
H FH CL WL Q SCPTCR + + +I +P EV + +L
Sbjct: 352 HQFHDWCLMWWLAQDS----SCPTCRCTIPSPQDQIR---QPPEVGNSTRL 395
Score = 88 (36.0 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 469 RSANENIANILAMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
R+A + M E VRE+ P M D+I DL+++ SA T+ N+L+
Sbjct: 424 RAAEPTEEQLQTMLEQVREMFPQMSVDIIMTDLRQSGSAQSTIENILE 471
Score = 58 (25.5 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
Identities = 29/124 (23%), Positives = 48/124 (38%)
Query: 14 FGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGL-WSVWLTVLCSLKMFQALAR 72
F EL E + YV+ +L +VI P + W +W + L Q +
Sbjct: 110 FKELARQEENVARQAFFCYVLLTIVYLSVVIGPQKGHRVMPWMIWGGICAFLSHLQFITC 169
Query: 73 DRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSV 132
RL+ + SPS + ++ LF+ V I + L +LL+F+ L
Sbjct: 170 QRLKHI--SPSCDRGSQ-KISFLSLFLFFVSIAMTFLISRFQHHLTWQPAVLLYFDCLLA 226
Query: 133 AFET 136
F +
Sbjct: 227 VFRS 230
>DICTYBASE|DDB_G0287847 [details] [associations]
symbol:DDB_G0287847 "putative E3 ubiquitin-protein
ligase" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 dictyBase:DDB_G0287847 GO:GO:0046872 GO:GO:0008270
EMBL:AAFI02000104 Gene3D:3.30.40.10 InterPro:IPR013083
eggNOG:COG5243 KO:K10601 RefSeq:XP_637096.1
ProteinModelPortal:Q54JQ6 EnsemblProtists:DDB0187676 GeneID:8626351
KEGG:ddi:DDB_G0287847 InParanoid:Q54JQ6 OMA:ETIPHIN
ProtClustDB:CLSZ2846663 Uniprot:Q54JQ6
Length = 688
Score = 174 (66.3 bits), Expect = 9.6e-10, P = 9.6e-10
Identities = 57/200 (28%), Positives = 94/200 (47%)
Query: 123 LLLFFEPLSVAFETMQAILVHGFQLLDIW-LHHSAGN-STNCARSKFFDTLAAGSLLE-- 178
+LLFF+ + + F + ++ HG + ++ L + S FF + G E
Sbjct: 125 ILLFFDLIFLYF-AVNSLFEHGINAMMLFSLEYGLLLVSVISTIISFFINIE-GIKREGR 182
Query: 179 W--KGILIRNFGFFLD-MATLLMALGHYIHIWWLRGMAFHLVDAILFLNIRALLSAIIKR 235
W KG+ I FF + + TL+ A+ + + + + H++ LF++ R +R
Sbjct: 183 WDQKGLYILYLEFFSEGIKTLMYAMFFVVSLIHI-ALPIHIIRQ-LFISFRTFY----RR 236
Query: 236 IKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSW 295
+ ++ + + DAT EEL D C +CRE M KKL C H+ HL CLRSW
Sbjct: 237 FQDLLQYQSIMNE---RFQDATDEELENSDKICIVCREDMTSGKKLPCGHILHLHCLRSW 293
Query: 296 LDQGLNEMYSCPTCRKPLFV 315
L++ +CP CR + V
Sbjct: 294 LER----QQTCPICRALVIV 309
>GENEDB_PFALCIPARUM|PF14_0215 [details] [associations]
symbol:PF14_0215 "hypothetical protein"
species:5833 "Plasmodium falciparum" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:AE014187 Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10601
RefSeq:XP_001348389.2 ProteinModelPortal:Q8ILM8
EnsemblProtists:PF14_0215:mRNA GeneID:811797 KEGG:pfa:PF14_0215
EuPathDB:PlasmoDB:PF3D7_1422500 HOGENOM:HOG000281286
ProtClustDB:CLSZ2514572 Uniprot:Q8ILM8
Length = 510
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 68/241 (28%), Positives = 111/241 (46%)
Query: 102 VDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTN 161
V +F I MCLL L S+F +F S+ TM L F+ L I+ S
Sbjct: 146 VKLF-IFMCLLSIANL--SLFT--YFYKNSLKNSTMYLWLF--FECLSIF------ESCQ 192
Query: 162 CARSKFFDTLAAGSLLEWKGILIR-NFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAI 220
+ KFF + L G+ + FFLD+ +M+L ++ ++ L + + +
Sbjct: 193 ISICKFFVNVI--DLRSQNGLSSKATILFFLDILHDIMSLIIFL-VFILVFVLNNFSNLP 249
Query: 221 LFL--NIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK- 277
L + +I ++ +I R K F K R ++ +AT EEL+ C ICR+ + +
Sbjct: 250 LHMTADIIHVVKTLISRFKSFQKYRELTKNIETKFANATEEELKEAGT-CIICRDDLKEG 308
Query: 278 AKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCR---KPLFVGRREIEANSRPGEVSSDEQ 334
+KKL C+H+FH+ CL+SW Q +CP CR KP + N + +E+
Sbjct: 309 SKKLSCSHIFHVDCLKSWFIQ----QQTCPICRTEIKPYAKNEQNKSENDTTQKEKQEEK 364
Query: 335 L 335
+
Sbjct: 365 I 365
>UNIPROTKB|Q8ILM8 [details] [associations]
symbol:PF14_0215 "Putative uncharacterized protein"
species:36329 "Plasmodium falciparum 3D7" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:AE014187 Gene3D:3.30.40.10 InterPro:IPR013083 KO:K10601
RefSeq:XP_001348389.2 ProteinModelPortal:Q8ILM8
EnsemblProtists:PF14_0215:mRNA GeneID:811797 KEGG:pfa:PF14_0215
EuPathDB:PlasmoDB:PF3D7_1422500 HOGENOM:HOG000281286
ProtClustDB:CLSZ2514572 Uniprot:Q8ILM8
Length = 510
Score = 161 (61.7 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 68/241 (28%), Positives = 111/241 (46%)
Query: 102 VDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTN 161
V +F I MCLL L S+F +F S+ TM L F+ L I+ S
Sbjct: 146 VKLF-IFMCLLSIANL--SLFT--YFYKNSLKNSTMYLWLF--FECLSIF------ESCQ 192
Query: 162 CARSKFFDTLAAGSLLEWKGILIR-NFGFFLDMATLLMALGHYIHIWWLRGMAFHLVDAI 220
+ KFF + L G+ + FFLD+ +M+L ++ ++ L + + +
Sbjct: 193 ISICKFFVNVI--DLRSQNGLSSKATILFFLDILHDIMSLIIFL-VFILVFVLNNFSNLP 249
Query: 221 LFL--NIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAK- 277
L + +I ++ +I R K F K R ++ +AT EEL+ C ICR+ + +
Sbjct: 250 LHMTADIIHVVKTLISRFKSFQKYRELTKNIETKFANATEEELKEAGT-CIICRDDLKEG 308
Query: 278 AKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCR---KPLFVGRREIEANSRPGEVSSDEQ 334
+KKL C+H+FH+ CL+SW Q +CP CR KP + N + +E+
Sbjct: 309 SKKLSCSHIFHVDCLKSWFIQ----QQTCPICRTEIKPYAKNEQNKSENDTTQKEKQEEK 364
Query: 335 L 335
+
Sbjct: 365 I 365
>FB|FBgn0039668 [details] [associations]
symbol:Trc8 "Trc8" species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045926 "negative
regulation of growth" evidence=IMP] [GO:0007418 "ventral midline
development" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
Prosite:PS00518 GO:GO:0005783 EMBL:AE014297 GO:GO:0016021
GO:GO:0005789 GO:GO:0046872 GO:GO:0008270 GO:GO:0045926
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00530000062938
GO:GO:0007418 eggNOG:NOG246550 KO:K15703 InterPro:IPR025754
Pfam:PF13705 EMBL:AF387786 EMBL:AY069375 EMBL:AY122250
EMBL:BT001260 RefSeq:NP_733292.1 RefSeq:NP_733293.1
RefSeq:NP_996303.1 RefSeq:NP_996304.1 UniGene:Dm.7902
ProteinModelPortal:Q7KRW1 SMR:Q7KRW1 IntAct:Q7KRW1 STRING:Q7KRW1
PaxDb:Q7KRW1 PRIDE:Q7KRW1 EnsemblMetazoa:FBtr0085432 GeneID:43476
KEGG:dme:Dmel_CG2304 UCSC:CG2304-RA CTD:43476 FlyBase:FBgn0039668
InParanoid:Q7KRW1 OMA:CETLTAV OrthoDB:EOG47WM3V PhylomeDB:Q7KRW1
GenomeRNAi:43476 NextBio:834128 Bgee:Q7KRW1 GermOnline:CG2304
Uniprot:Q7KRW1
Length = 809
Score = 166 (63.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 58/194 (29%), Positives = 88/194 (45%)
Query: 239 FIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQ 298
F+K R A+ H +ALP+AT +L+A+DD CAIC + M AK C H FH CLR WL
Sbjct: 593 FMKRRSAV-HKISALPEATPAQLQAFDDVCAICYQEMYSAKITRCRHFFHGVCLRKWLY- 650
Query: 299 GLNEMYSCPTCRK-PLFVGRREIEA-NSRPGEVSSDEQLARQLSMGLDRQNNTGQTLPTG 356
+ + CP C + ++ + + A + P + EQ R D NN +
Sbjct: 651 -VQDR--CPLCHEIMMYTDKADENAPEAEPAPAAQAEQPMRIYPR--DDANNAAAQRRS- 704
Query: 357 VFPNQTQPPVEGSPWRNAGLDSSWLHAWPSQGVDGAGPSTAMRSVGLSRVQMMMRHLASV 416
P + PVE S A SS ++ V S A +VG +R + + +S
Sbjct: 705 --PERA--PVEASEQAPATSSSSAAATIGAEAVSAIVESAA--AVGEARSLVSVASSSSA 758
Query: 417 GETYAQTAIEDTSW 430
+ + D+S+
Sbjct: 759 THRISASGSSDSSY 772
Score = 41 (19.5 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 8/33 (24%), Positives = 16/33 (48%)
Query: 54 WSVWLTVLCSLKMFQALARDRLERLNASPSATP 86
+++W +F R + +++A P ATP
Sbjct: 580 FNIWCEARAGWSVFMK-RRSAVHKISALPEATP 611
>POMBASE|SPBC17D11.02c [details] [associations]
symbol:hrd1 "ubiquitin-protein ligase Hrd1, synviolin
family" species:4896 "Schizosaccharomyces pombe" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISO] [GO:0005938 "cell cortex" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=ISM] [GO:0010620 "negative
regulation of transcription by transcription factor catabolism"
evidence=IMP] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IDA] [GO:0030433
"ER-associated protein catabolic process" evidence=IMP]
InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 PomBase:SPBC17D11.02c Prosite:PS00518
GO:GO:0016021 GO:GO:0005938 GO:GO:0005789 GO:GO:0046872
EMBL:CU329671 GO:GO:0008270 GenomeReviews:CU329671_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842
eggNOG:COG5243 HSSP:Q9H0F5 InterPro:IPR024766 Pfam:PF12678
KO:K10601 PIR:T39713 RefSeq:NP_596376.1 ProteinModelPortal:O74757
STRING:O74757 EnsemblFungi:SPBC17D11.02c.1 GeneID:2539900
KEGG:spo:SPBC17D11.02c OMA:LISHIRI OrthoDB:EOG4W3WW9
NextBio:20801045 GO:GO:0010620 Uniprot:O74757
Length = 677
Score = 103 (41.3 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 29/92 (31%), Positives = 45/92 (48%)
Query: 279 KKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQ 338
K+L C H+ H CLR+WL++ +CP CR+ + +G + +S G +S A Q
Sbjct: 324 KRLPCGHILHFHCLRNWLER----QQTCPICRRSV-IGNQ----SSPTGIPASPNVRATQ 374
Query: 339 LSMGLDRQNNTGQTLPTGVFPNQTQPPVEGSP 370
++ + NT T T V P T +G P
Sbjct: 375 IATQVPNPQNTPTT--TAV-PGITNSSNQGDP 403
Score = 81 (33.6 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 231 AIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPM 275
++ +RI+ + R A ++A P AT E+L D C ICRE M
Sbjct: 255 SLFRRIREHARFRQATRDMNAMYPTATEEQLTNSDRTCTICREEM 299
Score = 63 (27.2 bits), Expect = 7.0e-08, Sum P(3) = 7.0e-08
Identities = 29/124 (23%), Positives = 53/124 (42%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGL---WSVWLTVLCSLK 65
L+T+ FG L E E+ ++ T +++ TVF+ + + + L+ L +
Sbjct: 60 LKTLLFGSLQTFELELLYEQF--WI----TLTEIMLAITVFREAISISFFMLLSTLMFAR 113
Query: 66 MFQALARDRLERLNASPSATPWTYFRVFSALLFVLAV-DIFWIRMCLLLFKTLDSSMFLL 124
+F ++ R ERL + + F + FVL++ D I +C D S +L
Sbjct: 114 VFHSICSFRTERLQIQLTDQRFHIFSRLTCAYFVLSILDASLIYLCFTSEHLGDKSTRML 173
Query: 125 LFFE 128
E
Sbjct: 174 FVCE 177
Score = 41 (19.5 bits), Expect = 1.1e-05, Sum P(3) = 1.1e-05
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 99 VLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQ 138
+LA+ +F + + F L + MF +F S E +Q
Sbjct: 88 MLAITVFREAISISFFMLLSTLMFARVFHSICSFRTERLQ 127
>ZFIN|ZDB-GENE-030131-5264 [details] [associations]
symbol:rnf145b "ring finger protein 145b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
ZFIN:ZDB-GENE-030131-5264 GO:GO:0016021 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:NOG246550
InterPro:IPR025754 Pfam:PF13705 EMBL:BC049437 IPI:IPI00487505
RefSeq:NP_956057.1 UniGene:Dr.75712 ProteinModelPortal:Q7ZWF4
GeneID:327056 KEGG:dre:327056 CTD:327056 HOGENOM:HOG000072697
HOVERGEN:HBG054921 InParanoid:Q7ZWF4 OrthoDB:EOG4BCDMJ
NextBio:20809859 ArrayExpress:Q7ZWF4 Uniprot:Q7ZWF4
Length = 685
Score = 138 (53.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 40/145 (27%), Positives = 70/145 (48%)
Query: 207 WWLRGMAFHLVDAILFLNIRALLSAIIKRIKGFIKLRIALGHLHAALPDATSEELRAYDD 266
W + G LV + + +RA L + F+ R A+ H ++P A++ +L+ ++D
Sbjct: 482 WTVMGSTIILVHSYYNVWLRAQLGW-----QSFLLRRDAV-HKIQSMPTASTLQLQQHND 535
Query: 267 ECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRP 326
C+IC + M A C+H FH ACL+ WL + E +CP C L + +++ S P
Sbjct: 536 ICSICFQDMKSAVITPCSHFFHAACLKKWLY--VQE--TCPLCHGQL---KSQLQPTSSP 588
Query: 327 GEVSSDEQLARQLSMGLDRQNNTGQ 351
G + A Q ++++ Q
Sbjct: 589 GTPTQGTPAANQNPREVEQEQRQPQ 613
Score = 64 (27.6 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 30/167 (17%), Positives = 72/167 (43%)
Query: 48 VFQAGLWSVWLTVLCS--LKMFQALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIF 105
+ +A L S+ L ++ + L+ +A + L AS + W +FR S LF+L +
Sbjct: 336 IHRAFLLSIILFIVVASILQSMLEIADPIVLALGASRDKSLWKHFRAVSLCLFLLVFPAY 395
Query: 106 WIRMCLLLFKTLDSSMFLLLFFEPLSVAFETMQAILVHGFQLLDIWLHHSAGNSTNC--- 162
M F+ +D + L++ + + + + +L++ +++ + N
Sbjct: 396 MAYMICQFFR-MDFWL-LIIISSSILTSLQVLGTLLIYVLFMVEEFRKAPVENMDEVIYY 453
Query: 163 --ARSKFFDTLAAGSLLEWKGILIRNFGFFLDMATLLMALGHYIHIW 207
+ + L A ++ + G+ FG + M + ++ + Y ++W
Sbjct: 454 VNGTYRLLEFLVAVCVVAY-GVSETLFGEWTVMGSTIILVHSYYNVW 499
>UNIPROTKB|F1PJJ1 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
EMBL:AAEX03003057 Ensembl:ENSCAFT00000027404 Uniprot:F1PJJ1
Length = 688
Score = 135 (52.6 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 46/131 (35%), Positives = 63/131 (48%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 296
K F+ R A+ + + LP AT E+L ++D CAIC + M A C+H FH CL+ WL
Sbjct: 534 KSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWL 592
Query: 297 DQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQ--TLP 354
+ E +CP C L ++ PG +LA Q G++ QN Q T P
Sbjct: 593 Y--VQE--TCPLCHCHLK------HSSQLPG---LGTELAPQPHAGVE-QNIMLQDGTEP 638
Query: 355 TGVFPNQTQPP 365
PNQ PP
Sbjct: 639 ----PNQEHPP 645
Score = 65 (27.9 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 36/196 (18%), Positives = 82/196 (41%)
Query: 19 PAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCS--LKMFQALARDRLE 76
PA R E + ++ T L+ V +A L S+ L ++ + L+ +A +
Sbjct: 336 PAMNRGMTEGVTLLILAVQT--GLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVL 393
Query: 77 RLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFET 136
L AS + W +FR S LF+L + M F +D + L++ + + +
Sbjct: 394 ALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFH-MDFWL-LIIISSSILTSLQV 451
Query: 137 MQAILVHGFQLLDIWLHHSAGNSTNC-----ARSKFFDTLAAGSLLEWKGILIRNFGFFL 191
+ + ++ +++ + N + + + L A ++ + G+ FG +
Sbjct: 452 LGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFLVALCVVAY-GVSETIFGEWT 510
Query: 192 DMATLLMALGHYIHIW 207
M ++++ + Y ++W
Sbjct: 511 VMGSMIIFIHSYYNVW 526
>UNIPROTKB|H3BQM3 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR026608 GO:GO:0005634 GO:GO:0005737
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0016567
GO:GO:0030426 GO:GO:0007611 GO:GO:0004842 HGNC:HGNC:463
ChiTaRS:AMFR PANTHER:PTHR12477:SF4 EMBL:AC092140 EMBL:AC009102
Ensembl:ENST00000563664 Bgee:H3BQM3 Uniprot:H3BQM3
Length = 165
Score = 128 (50.1 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIP-PTVFQAGLWSVWLTVLCSLKMF 67
+Q I FG L +E + ++ N++ YK F+ V+ TV + +W +W L L +
Sbjct: 7 IQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLM 66
Query: 68 QALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFF 127
L +DR E L+ SP+ ++ RV S L+ +L +C + T +
Sbjct: 67 VQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLLSCCGLAAVCSITGYTHGMHTLAFMAA 126
Query: 128 EPLSVAFETMQAILVHGFQLLDI 150
E L V T IL + L D+
Sbjct: 127 ESLLVTVRTAHVILRYVIHLWDL 149
>UNIPROTKB|J9NTM9 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
OMA:AGAEQNV EMBL:AAEX03003057 Ensembl:ENSCAFT00000049082
Uniprot:J9NTM9
Length = 766
Score = 135 (52.6 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 46/131 (35%), Positives = 63/131 (48%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 296
K F+ R A+ + + LP AT E+L ++D CAIC + M A C+H FH CL+ WL
Sbjct: 603 KSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWL 661
Query: 297 DQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQ--TLP 354
+ E +CP C L ++ PG +LA Q G++ QN Q T P
Sbjct: 662 Y--VQE--TCPLCHCHLK------HSSQLPG---LGTELAPQPHAGVE-QNIMLQDGTEP 707
Query: 355 TGVFPNQTQPP 365
PNQ PP
Sbjct: 708 ----PNQEHPP 714
Score = 65 (27.9 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 36/196 (18%), Positives = 82/196 (41%)
Query: 19 PAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCS--LKMFQALARDRLE 76
PA R E + ++ T L+ V +A L S+ L ++ + L+ +A +
Sbjct: 405 PAMNRGMTEGVTLLILAVQT--GLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVL 462
Query: 77 RLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFET 136
L AS + W +FR S LF+L + M F +D + L++ + + +
Sbjct: 463 ALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFH-MDFWL-LIIISSSILTSLQV 520
Query: 137 MQAILVHGFQLLDIWLHHSAGNSTNC-----ARSKFFDTLAAGSLLEWKGILIRNFGFFL 191
+ + ++ +++ + N + + + L A ++ + G+ FG +
Sbjct: 521 LGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFLVALCVVAY-GVSETIFGEWT 579
Query: 192 DMATLLMALGHYIHIW 207
M ++++ + Y ++W
Sbjct: 580 VMGSMIIFIHSYYNVW 595
>UNIPROTKB|F1RR35 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
OMA:AGAEQNV EMBL:FP016137 Ensembl:ENSSSCT00000018556 Uniprot:F1RR35
Length = 617
Score = 132 (51.5 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 296
K F+ R A+ + + LP AT E+L ++D CAIC + M A C+H FH CL+ WL
Sbjct: 455 KSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWL 513
Query: 297 DQGLNEMYSCPTC 309
+ E +CP C
Sbjct: 514 Y--VQE--TCPLC 522
Score = 65 (27.9 bits), Expect = 2.8e-07, Sum P(2) = 2.8e-07
Identities = 36/196 (18%), Positives = 82/196 (41%)
Query: 19 PAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCS--LKMFQALARDRLE 76
PA R E + ++ T L+ V +A L S+ L ++ + L+ +A +
Sbjct: 257 PAMNRGMTEGVTLLILAVQT--GLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVL 314
Query: 77 RLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFET 136
L AS + W +FR S LF+L + M F +D + L++ + + +
Sbjct: 315 ALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFH-MDFWL-LIIISSSILTSLQV 372
Query: 137 MQAILVHGFQLLDIWLHHSAGNSTNC-----ARSKFFDTLAAGSLLEWKGILIRNFGFFL 191
+ + ++ +++ + N + + + L A ++ + G+ FG +
Sbjct: 373 LGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFLVALCVVAY-GVSETIFGEWT 431
Query: 192 DMATLLMALGHYIHIW 207
M ++++ + Y ++W
Sbjct: 432 VMGSMIIFIHSYYNVW 447
>UNIPROTKB|E1C258 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
OMA:AGAEQNV EMBL:AADN02028698 IPI:IPI00579284
Ensembl:ENSGALT00000005847 Uniprot:E1C258
Length = 667
Score = 133 (51.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 296
K F+ R A+ + + LP AT E+L ++D CAIC + M A C+H FH CL+ WL
Sbjct: 507 KSFLLRRDAVNKIKS-LPTATKEQLEQHNDICAICYQDMKTAVITPCSHFFHAGCLKKWL 565
Query: 297 DQGLNEMYSCPTC 309
+ E +CP C
Sbjct: 566 Y--VQE--TCPLC 574
Score = 64 (27.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 36/196 (18%), Positives = 82/196 (41%)
Query: 19 PAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCS--LKMFQALARDRLE 76
PA R E + ++ T L+ V +A L S+ L ++ + L+ +A +
Sbjct: 309 PAMNRGMTEGVTLLILAVQT--GLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVL 366
Query: 77 RLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFET 136
L AS + W +FR S LF+L + M F +D + L++ + + +
Sbjct: 367 ALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFH-MDFWL-LIIISSSILTSLQV 424
Query: 137 MQAILVHGFQLLDIWLHHSAGNSTNC-----ARSKFFDTLAAGSLLEWKGILIRNFGFFL 191
+ + ++ +++ + N + + + L A ++ + G+ FG +
Sbjct: 425 LGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFLVALCVVAY-GVSETVFGEWT 483
Query: 192 DMATLLMALGHYIHIW 207
M ++++ + Y ++W
Sbjct: 484 VMGSVIIFIHSYYNVW 499
>UNIPROTKB|Q96MT1 [details] [associations]
symbol:RNF145 "RING finger protein 145" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 Prosite:PS00518
GO:GO:0016021 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9H0F5 eggNOG:NOG246550 InterPro:IPR025754
Pfam:PF13705 HOGENOM:HOG000072697 HOVERGEN:HBG054921
OrthoDB:EOG4BCDMJ EMBL:AK056513 EMBL:AK304228 EMBL:AK304435
EMBL:AK308394 EMBL:AC134043 EMBL:BC042684 IPI:IPI00043360
IPI:IPI00930398 IPI:IPI00975659 IPI:IPI00976259 IPI:IPI00979590
RefSeq:NP_001186309.1 RefSeq:NP_001186310.1 RefSeq:NP_001186311.1
RefSeq:NP_001186312.1 RefSeq:NP_653327.1 UniGene:Hs.349306
ProteinModelPortal:Q96MT1 SMR:Q96MT1 PhosphoSite:Q96MT1
DMDM:152060502 PRIDE:Q96MT1 Ensembl:ENST00000274542
Ensembl:ENST00000413445 Ensembl:ENST00000424310
Ensembl:ENST00000518802 Ensembl:ENST00000519865
Ensembl:ENST00000520638 Ensembl:ENST00000535312 GeneID:153830
KEGG:hsa:153830 UCSC:uc003lxo.2 UCSC:uc003lxp.3 CTD:153830
GeneCards:GC05M158517 HGNC:HGNC:20853 HPA:HPA036562
neXtProt:NX_Q96MT1 PharmGKB:PA134876286 InParanoid:Q96MT1
OMA:AGAEQNV GenomeRNAi:153830 NextBio:87196 ArrayExpress:Q96MT1
Bgee:Q96MT1 CleanEx:HS_RNF145 Genevestigator:Q96MT1 Uniprot:Q96MT1
Length = 663
Score = 132 (51.5 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 296
K F+ R A+ + + LP AT E+L ++D CAIC + M A C+H FH CL+ WL
Sbjct: 507 KSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWL 565
Query: 297 DQGLNEMYSCPTC 309
+ E +CP C
Sbjct: 566 Y--VQE--TCPLC 574
Score = 65 (27.9 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 36/196 (18%), Positives = 82/196 (41%)
Query: 19 PAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCS--LKMFQALARDRLE 76
PA R E + ++ T L+ V +A L S+ L ++ + L+ +A +
Sbjct: 309 PAMNRGMTEGVTLLILAVQT--GLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVL 366
Query: 77 RLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFET 136
L AS + W +FR S LF+L + M F +D + L++ + + +
Sbjct: 367 ALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFH-MDFWL-LIIISSSILTSLQV 424
Query: 137 MQAILVHGFQLLDIWLHHSAGNSTNC-----ARSKFFDTLAAGSLLEWKGILIRNFGFFL 191
+ + ++ +++ + N + + + L A ++ + G+ FG +
Sbjct: 425 LGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFLVALCVVAY-GVSETIFGEWT 483
Query: 192 DMATLLMALGHYIHIW 207
M ++++ + Y ++W
Sbjct: 484 VMGSMIIFIHSYYNVW 499
>UNIPROTKB|E7EW26 [details] [associations]
symbol:RNF145 "RING finger protein 145" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR025754 Pfam:PF13705 EMBL:AC134043 IPI:IPI00975659
HGNC:HGNC:20853 ProteinModelPortal:E7EW26 SMR:E7EW26
Ensembl:ENST00000521606 UCSC:uc011dea.2 ArrayExpress:E7EW26
Bgee:E7EW26 Uniprot:E7EW26
Length = 679
Score = 132 (51.5 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 296
K F+ R A+ + + LP AT E+L ++D CAIC + M A C+H FH CL+ WL
Sbjct: 523 KSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWL 581
Query: 297 DQGLNEMYSCPTC 309
+ E +CP C
Sbjct: 582 Y--VQE--TCPLC 590
Score = 65 (27.9 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 36/196 (18%), Positives = 82/196 (41%)
Query: 19 PAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCS--LKMFQALARDRLE 76
PA R E + ++ T L+ V +A L S+ L ++ + L+ +A +
Sbjct: 325 PAMNRGMTEGVTLLILAVQT--GLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVL 382
Query: 77 RLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFET 136
L AS + W +FR S LF+L + M F +D + L++ + + +
Sbjct: 383 ALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFH-MDFWL-LIIISSSILTSLQV 440
Query: 137 MQAILVHGFQLLDIWLHHSAGNSTNC-----ARSKFFDTLAAGSLLEWKGILIRNFGFFL 191
+ + ++ +++ + N + + + L A ++ + G+ FG +
Sbjct: 441 LGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFLVALCVVAY-GVSETIFGEWT 499
Query: 192 DMATLLMALGHYIHIW 207
M ++++ + Y ++W
Sbjct: 500 VMGSMIIFIHSYYNVW 515
>UNIPROTKB|H3BSK3 [details] [associations]
symbol:AMFR "E3 ubiquitin-protein ligase AMFR" species:9606
"Homo sapiens" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR026608 GO:GO:0005634 GO:GO:0005737
GO:GO:0007568 GO:GO:0043025 GO:GO:0030425 GO:GO:0016567
GO:GO:0030426 GO:GO:0007611 GO:GO:0004842 HGNC:HGNC:463
ChiTaRS:AMFR PANTHER:PTHR12477:SF4 EMBL:AC092140 EMBL:AC009102
Ensembl:ENST00000565445 Bgee:H3BSK3 Uniprot:H3BSK3
Length = 229
Score = 140 (54.3 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 57/204 (27%), Positives = 88/204 (43%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIP-PTVFQAGLWSVWLTVLCSLKMF 67
+Q I FG L +E + ++ N++ YK F+ V+ TV + +W +W L L +
Sbjct: 7 IQCIVFGPLRVSERQHLKDKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLM 66
Query: 68 QALARDRLERLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFF 127
L +DR E L+ SP+ ++ RV S L+ +L +C + T +
Sbjct: 67 VQLCKDRFEYLSFSPTTPMSSHGRVLSLLVAMLLSCCGLAAVCSITGYTHGMHTLAFMAA 126
Query: 128 EPLSVAFETMQAILVHGFQLLDIWLHHSA---GNSTNCARSKFFDTLAAGSLLEWKGILI 184
E L V T IL + L D L+H G T + F L SL I +
Sbjct: 127 ESLLVTVRTAHVILRYVIHLWD--LNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHM 184
Query: 185 RNFG-FFLDMATLL--MALGHYIH 205
FG +L MA+L+ M L + H
Sbjct: 185 LLFGNIWLSMASLVIFMQLRYLFH 208
>UNIPROTKB|F1MGV3 [details] [associations]
symbol:RNF145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
OMA:AGAEQNV EMBL:DAAA02020846 IPI:IPI00867476 UniGene:Bt.9337
Ensembl:ENSBTAT00000056189 ArrayExpress:F1MGV3 Uniprot:F1MGV3
Length = 707
Score = 132 (51.5 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 29/73 (39%), Positives = 41/73 (56%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 296
K F+ R A+ + + LP AT E+L ++D CAIC + M A C+H FH CL+ WL
Sbjct: 507 KSFLLRRDAVNKIKS-LPIATKEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWL 565
Query: 297 DQGLNEMYSCPTC 309
+ E +CP C
Sbjct: 566 Y--VQE--TCPLC 574
Score = 65 (27.9 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 36/196 (18%), Positives = 82/196 (41%)
Query: 19 PAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCS--LKMFQALARDRLE 76
PA R E + ++ T L+ V +A L S+ L ++ + L+ +A +
Sbjct: 309 PAMNRGMTEGVTLLILAVQT--GLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVL 366
Query: 77 RLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFET 136
L AS + W +FR S LF+L + M F +D + L++ + + +
Sbjct: 367 ALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFH-MDFWL-LIIISSSILTSLQV 424
Query: 137 MQAILVHGFQLLDIWLHHSAGNSTNC-----ARSKFFDTLAAGSLLEWKGILIRNFGFFL 191
+ + ++ +++ + N + + + L A ++ + G+ FG +
Sbjct: 425 LGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFLVALCVVAY-GVSETIFGEWT 483
Query: 192 DMATLLMALGHYIHIW 207
M ++++ + Y ++W
Sbjct: 484 VMGSMIIFIHSYYNVW 499
>UNIPROTKB|E9PMA1 [details] [associations]
symbol:SYVN1 "E3 ubiquitin-protein ligase synoviolin"
species:9606 "Homo sapiens" [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] GO:GO:0001701 EMBL:AP003068
HGNC:HGNC:20738 ChiTaRS:SYVN1 IPI:IPI00983790
Ensembl:ENST00000531018 ArrayExpress:E9PMA1 Bgee:E9PMA1
Uniprot:E9PMA1
Length = 236
Score = 95 (38.5 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 33/118 (27%), Positives = 58/118 (49%)
Query: 12 IFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQALA 71
+FFG+L AE +ER Y + + T L + F +++ T+L LK F LA
Sbjct: 4 VFFGQLRAAEMEHLLERSW-YAVTE-TCLAFTVFRDDFSPRFVALF-TLLLFLKCFHWLA 60
Query: 72 RDRLERLNASPSATPWTYFRVFSALLFVLAV-DIFWIRMCLLLFKTLDSSMFLLLFFE 128
DR++ + SP+ + W + +L+F+L + D ++ T +S+ L+ FE
Sbjct: 61 EDRVDFMERSPNIS-WLFHCRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFE 117
Score = 87 (35.7 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 18/40 (45%), Positives = 25/40 (62%)
Query: 234 KRIKGFIKLRIALGHLHAALPDATSEELRAYDDECAICRE 273
K + I R A+ +++ PDAT EEL+A D+ C ICRE
Sbjct: 197 KAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICRE 236
>MGI|MGI:1921565 [details] [associations]
symbol:Rnf145 "ring finger protein 145" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 MGI:MGI:1921565 Prosite:PS00518 GO:GO:0016021
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 HSSP:Q9H0F5 eggNOG:NOG246550
InterPro:IPR025754 Pfam:PF13705 HOGENOM:HOG000072697
HOVERGEN:HBG054921 OrthoDB:EOG4BCDMJ CTD:153830 OMA:AGAEQNV
EMBL:AK014408 EMBL:AK043002 EMBL:AL603913 EMBL:BC040799
IPI:IPI00757041 RefSeq:NP_083138.2 UniGene:Mm.156771
ProteinModelPortal:Q5SWK7 SMR:Q5SWK7 PhosphoSite:Q5SWK7
PRIDE:Q5SWK7 Ensembl:ENSMUST00000019333 GeneID:74315 KEGG:mmu:74315
UCSC:uc007inh.2 InParanoid:Q5SWK7 ChiTaRS:RNF145 NextBio:340427
Bgee:Q5SWK7 CleanEx:MM_RNF145 Genevestigator:Q5SWK7 Uniprot:Q5SWK7
Length = 663
Score = 129 (50.5 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 28/73 (38%), Positives = 41/73 (56%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWL 296
K F+ R A+ + + LP AT E+L ++D CAIC + M A C+H FH CL+ WL
Sbjct: 507 KSFLLRRDAVNKIKS-LPVATQEQLEKHNDICAICYQDMKSAVITPCSHFFHAGCLKKWL 565
Query: 297 DQGLNEMYSCPTC 309
+ + +CP C
Sbjct: 566 Y--VQD--TCPLC 574
Score = 62 (26.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 35/196 (17%), Positives = 82/196 (41%)
Query: 19 PAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCS--LKMFQALARDRLE 76
PA R E + ++ T L+ V +A L S+ L ++ + L+ +A +
Sbjct: 309 PAMNRGMTEGVTLLILAVQT--GLIELQVVHRAFLLSIILFIVVASILQSMLEIADPIVL 366
Query: 77 RLNASPSATPWTYFRVFSALLFVLAVDIFWIRMCLLLFKTLDSSMFLLLFFEPLSVAFET 136
L AS + W +FR S LF+L + M F +D + L++ + + +
Sbjct: 367 ALGASRDKSLWKHFRAVSLCLFLLVFPAYMAYMICQFFH-MDFWL-LIIISSSILTSLQV 424
Query: 137 MQAILVHGFQLLDIWLHHSAGNSTNC-----ARSKFFDTLAAGSLLEWKGILIRNFGFFL 191
+ + ++ +++ + N + + + + A ++ + G+ FG +
Sbjct: 425 LGTLFIYVLFMVEEFRKEPVENMDDVIYYVNGTYRLLEFVVALCVVAY-GVSETIFGEWT 483
Query: 192 DMATLLMALGHYIHIW 207
M ++++ + Y ++W
Sbjct: 484 VMGSMIIFIHSYYNVW 499
>MGI|MGI:1923091 [details] [associations]
symbol:Rnf139 "ring finger protein 139" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0017148 "negative
regulation of translation" evidence=ISO] [GO:0019787 "small
conjugating protein ligase activity" evidence=ISO] [GO:0031396
"regulation of protein ubiquitination" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0060628 "regulation of ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0070613
"regulation of protein processing" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
MGI:MGI:1923091 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
GO:GO:0008285 GO:GO:0017148 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GeneTree:ENSGT00530000062938 GO:GO:0031396 GO:GO:0060628
GO:GO:0070613 CTD:11236 eggNOG:NOG246550 HOGENOM:HOG000267029
HOVERGEN:HBG053146 KO:K15703 OrthoDB:EOG4H4638 InterPro:IPR025754
Pfam:PF13705 EMBL:AK033506 EMBL:BC052901 IPI:IPI00227711
RefSeq:NP_780435.1 UniGene:Mm.4537 UniGene:Mm.460627
ProteinModelPortal:Q7TMV1 SMR:Q7TMV1 STRING:Q7TMV1
PhosphoSite:Q7TMV1 PRIDE:Q7TMV1 Ensembl:ENSMUST00000036904
GeneID:75841 KEGG:mmu:75841 UCSC:uc007vtq.2 InParanoid:Q7TMV1
NextBio:344088 Bgee:Q7TMV1 CleanEx:MM_RNF139 Genevestigator:Q7TMV1
GermOnline:ENSMUSG00000037075 Uniprot:Q7TMV1
Length = 668
Score = 145 (56.1 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/122 (31%), Positives = 61/122 (50%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 295
K F+ R A+ +++ LP+ L+ DD CAIC + ++ CNH FH CLR W
Sbjct: 517 KTFMNRRTAVKKINS-LPEIKGSHLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKW 575
Query: 296 LDQGLNEMYSCPTCRKPLFVGRREIEANSR---------PGEVSSDEQLARQLSMGLDRQ 346
L + + +CP C + +++ EI+ NS P E + E+ R+ + G DR+
Sbjct: 576 LY--IQD--TCPMCHQKVYI-EDEIKDNSNASNNNGFIAPNENPNPEEALREDAAGSDRE 630
Query: 347 NN 348
N
Sbjct: 631 LN 632
Score = 45 (20.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 FVLAVDIFWIRMCLLLFKTLDSSMFLL 124
F ++ D FW +C L+ DS++ +L
Sbjct: 266 FFISWDDFWDVICNLIISGCDSTLTVL 292
>UNIPROTKB|E3M334 [details] [associations]
symbol:Cre-hrdl-1 "CRE-HRDL-1 protein" species:31234
"Caenorhabditis remanei" [GO:1901214 "regulation of neuron death"
evidence=ISS] InterPro:IPR001841 InterPro:IPR003892 Pfam:PF02845
Pfam:PF13639 PROSITE:PS50089 PROSITE:PS51140 SMART:SM00184
SMART:SM00546 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:1901214 OMA:FRSTYIL EMBL:DS268423
RefSeq:XP_003109304.1 EnsemblMetazoa:CRE08050 GeneID:9821113
CTD:9821113 Uniprot:E3M334
Length = 577
Score = 111 (44.1 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/63 (41%), Positives = 35/63 (55%)
Query: 265 DDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGR---REIE 321
DD C +C E + +++L C+H FH CL WL Q SCPTCR + + RE +
Sbjct: 347 DDRCVVCWELLGTSRRLPCSHQFHDWCLMWWLAQDS----SCPTCRCIIPSPQDQLREAD 402
Query: 322 ANS 324
ANS
Sbjct: 403 ANS 405
Score = 79 (32.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 469 RSANENIANILAMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
R+A + + M E VRE+ P M + I DL++T T+ N+L+
Sbjct: 438 RAAEPSEEQLQTMLEQVREMFPQMSTEAILTDLRQTGMTQTTIENILE 485
>RGD|1306670 [details] [associations]
symbol:Rnf139 "ring finger protein 139" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISO]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005783
"endoplasmic reticulum" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008285 "negative regulation
of cell proliferation" evidence=ISO] [GO:0016567 "protein
ubiquitination" evidence=ISO] [GO:0017148 "negative regulation of
translation" evidence=ISO] [GO:0019787 "small conjugating protein
ligase activity" evidence=ISO] [GO:0031396 "regulation of protein
ubiquitination" evidence=ISO] [GO:0060628 "regulation of ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0070613
"regulation of protein processing" evidence=ISO] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 RGD:1306670
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AH009105 IPI:IPI00360791 ProteinModelPortal:Q9JLC5
UCSC:RGD:1306670 InParanoid:Q9JLC5 Genevestigator:Q9JLC5
Uniprot:Q9JLC5
Length = 100
Score = 119 (46.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 252 ALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSWLDQGLNEMYSCPTCR 310
+LP+ L+ DD C IC + ++ CNH FH CLR WL + + +CP C
Sbjct: 12 SLPEIKGSHLQEIDDVCXICYHEFTTSARITPCNHYFHALCLRKWLY--IQD--TCPMCH 67
Query: 311 KPLFVGRREIEANS 324
+ +++ +I+ NS
Sbjct: 68 QKVYI-EDDIKDNS 80
>UNIPROTKB|F1NPF1 [details] [associations]
symbol:RNF139 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0031396 "regulation of protein ubiquitination" evidence=IEA]
[GO:0060628 "regulation of ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0070613 "regulation of protein processing"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 GO:GO:0005783 GO:GO:0008285 GO:GO:0017148
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GeneTree:ENSGT00530000062938 GO:GO:0031396
GO:GO:0060628 GO:GO:0070613 OMA:RIRFPDI InterPro:IPR025754
Pfam:PF13705 EMBL:AADN02022490 IPI:IPI00580768
Ensembl:ENSGALT00000026354 Uniprot:F1NPF1
Length = 603
Score = 144 (55.7 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 36/118 (30%), Positives = 57/118 (48%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 295
K FI R A+ +++ LP+ LR DD CAIC + ++ CNH FH CLR W
Sbjct: 461 KTFINRRTAVKKINS-LPEVKGSRLREIDDVCAICYHEFTTSARITPCNHYFHALCLRKW 519
Query: 296 LDQGLNEMYSCPTCRKPLFVGRREIEAN--SRPGEVSSDEQLARQLSMGLDRQNNTGQ 351
L + + +CP C + +++ +E AN + G V +E + D +N +
Sbjct: 520 LY--IQD--TCPMCHQKVYIEDKE-NANISNNNGFVPPNEDPVQVAEEAADAENELNE 572
Score = 41 (19.5 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 98 FVLAVDIFWIRMCLLLFKTLDSSMFLL 124
F+++ D W +C L+ DS++ +L
Sbjct: 210 FLISWDNCWELICSLIISGCDSTLTVL 236
>RGD|1305337 [details] [associations]
symbol:Triml1 "tripartite motif family-like 1" species:10116
"Rattus norvegicus" [GO:0007275 "multicellular organismal
development" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR003877 Pfam:PF00622
PROSITE:PS50089 SMART:SM00184 RGD:1305337 Prosite:PS00518
GO:GO:0007275 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR001870 PROSITE:PS50188
InterPro:IPR003879 InterPro:IPR006574 PRINTS:PR01407 SMART:SM00589
GeneTree:ENSGT00690000101646 OrthoDB:EOG41C6W4 IPI:IPI00392751
Ensembl:ENSRNOT00000019474 Uniprot:D4A221
Length = 471
Score = 136 (52.9 bits), Expect = 7.7e-06, P = 7.7e-06
Identities = 41/125 (32%), Positives = 62/125 (49%)
Query: 259 EELRAYDDECAICREPMAKAKKLLCNHLFHLACL-RSWLDQGLNEMYSCPTCRKPLFVGR 317
E LR + C IC + + C H F L CL +SW + N SCP C + L G
Sbjct: 14 ENLRE-ELTCFICLDYFSSPVTTECGHSFCLTCLLKSWEEH--NTPLSCPECWRTL--GA 68
Query: 318 REIEANSRPGEVSS-DEQLARQLSMGLDRQNNTGQTL-PTGVFPNQTQPPVEGSPWRNAG 375
+AN R G +++ QL Q+ D Q+N+G+T P+ VF + Q + SP N G
Sbjct: 69 PHFQANERLGRLANIGRQLRCQVLQSEDEQSNSGRTPGPSRVFSDDEQSVINFSP-PNHG 127
Query: 376 LDSSW 380
++ ++
Sbjct: 128 MNRAY 132
>UNIPROTKB|F1RF19 [details] [associations]
symbol:AMFR "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051259 "protein oligomerization" evidence=IEA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IEA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IEA] [GO:0030176 "integral to endoplasmic reticulum
membrane" evidence=IEA] [GO:0004872 "receptor activity"
evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003892 InterPro:IPR026608 Pfam:PF02845
PROSITE:PS51140 SMART:SM00546 GO:GO:0051259 GO:GO:0030176
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842
GO:GO:0030968 GO:GO:0000209 PANTHER:PTHR12477:SF4
GeneTree:ENSGT00530000062938 EMBL:CU469156
Ensembl:ENSSSCT00000003122 OMA:NISEPAI Uniprot:F1RF19
Length = 292
Score = 91 (37.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 480 AMAETVREVLPHMPEDLIFQDLQRTNSATITVNNLLQ 516
AMA ++E+ P +P L+ QDLQ T S IT +N+L+
Sbjct: 108 AMAHQIQEMFPQVPYHLVLQDLQLTRSVEITTDNILE 144
Score = 84 (34.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/53 (39%), Positives = 25/53 (47%)
Query: 283 CNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQL 335
C F +CLRSWL+Q SCPTCR L + GE + DE L
Sbjct: 5 CGLFFGSSCLRSWLEQDT----SCPTCRMSLNIADNSRVREDHQGE-NLDENL 52
>UNIPROTKB|J9P149 [details] [associations]
symbol:RNF139 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 CTD:11236 KO:K15703 OMA:RIRFPDI
InterPro:IPR025754 Pfam:PF13705 EMBL:AAEX03008789
RefSeq:XP_851772.1 ProteinModelPortal:J9P149
Ensembl:ENSCAFT00000050017 GeneID:609422 KEGG:cfa:609422
Uniprot:J9P149
Length = 664
Score = 136 (52.9 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 295
K F+ R A+ +++ LP+ LR DD CAIC + ++ CNH FH CLR W
Sbjct: 517 KTFMNRRTAVKKINS-LPEIKGSRLREIDDVCAICYHEFTTSARITPCNHYFHALCLRKW 575
Query: 296 LDQGLNEMYSCPTCRKPLFVGRREIEANSR----PGEVSSDE---QLARQLSMGLDRQNN 348
L + + +CP C + +++ +I+ NS G ++ +E + R+ + DR+ N
Sbjct: 576 LY--IQD--TCPMCHQKVYI-EDDIKDNSNISNNNGFIAPNENPEEAVREAAAESDRELN 630
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 FVLAVDIFWIRMCLLLFKTLDSSMFLL 124
F ++ D FW +C L+ DS++ +L
Sbjct: 266 FFISWDDFWDLICNLIISGCDSTLTVL 292
>TAIR|locus:2059793 [details] [associations]
symbol:XERICO species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006970 "response to osmotic
stress" evidence=IEP] [GO:0009651 "response to salt stress"
evidence=IEP] [GO:0010200 "response to chitin" evidence=IEP]
[GO:0009687 "abscisic acid metabolic process" evidence=IMP]
[GO:0009739 "response to gibberellin stimulus" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0009651
GO:GO:0008270 GO:GO:0009687 GO:GO:0010200 GO:GO:0009739
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AC007213
HOGENOM:HOG000242879 KO:K16285 EMBL:AF324691 EMBL:AF326867
EMBL:AF339689 IPI:IPI00518775 PIR:E84455 RefSeq:NP_178507.1
RefSeq:NP_973416.1 UniGene:At.14524 ProteinModelPortal:Q9SI09
SMR:Q9SI09 STRING:Q9SI09 PaxDb:Q9SI09 PRIDE:Q9SI09
EnsemblPlants:AT2G04240.1 EnsemblPlants:AT2G04240.2 GeneID:814962
KEGG:ath:AT2G04240 TAIR:At2g04240 eggNOG:NOG275580
InParanoid:Q9SI09 OMA:CRHRLLP PhylomeDB:Q9SI09
ProtClustDB:CLSN2683970 ArrayExpress:Q9SI09 Genevestigator:Q9SI09
Uniprot:Q9SI09
Length = 162
Score = 116 (45.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 265 DDECAICREPM---AKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFV 315
D+EC++C ++ KL C HLFH CL W+D N +CP CR PL V
Sbjct: 100 DNECSVCLSKFQGDSEINKLKCGHLFHKTCLEKWIDYW-N--ITCPLCRTPLVV 150
>TAIR|locus:2038766 [details] [associations]
symbol:RHA2B "RING-H2 finger protein 2B" species:3702
"Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=TAS] [GO:0080167 "response to karrikin" evidence=IEP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0080167
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AC006200
HOGENOM:HOG000090787 KO:K16282 ProtClustDB:CLSN2679440
EMBL:AF078823 IPI:IPI00526074 PIR:C84421 PIR:T51843
RefSeq:NP_565253.1 UniGene:At.21443 ProteinModelPortal:Q9ZU51
SMR:Q9ZU51 IntAct:Q9ZU51 STRING:Q9ZU51 EnsemblPlants:AT2G01150.1
GeneID:814644 KEGG:ath:AT2G01150 GeneFarm:4093 TAIR:At2g01150
eggNOG:NOG328417 InParanoid:Q9ZU51 OMA:YRYSDNA PhylomeDB:Q9ZU51
Genevestigator:Q9ZU51 GermOnline:AT2G01150 Uniprot:Q9ZU51
Length = 147
Score = 109 (43.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 267 ECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 313
+C +C + + +KL C H+FH CL WL Q LN ++CP CR PL
Sbjct: 73 DCIVCLSKLKTGEEVRKLDCRHVFHKQCLEGWL-QHLN--FNCPLCRSPL 119
>UNIPROTKB|F1RRQ2 [details] [associations]
symbol:F1RRQ2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 InterPro:IPR025754 Pfam:PF13705
EMBL:FP476059 Ensembl:ENSSSCT00000006556 OMA:YNASAFG Uniprot:F1RRQ2
Length = 611
Score = 131 (51.2 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 295
K F+ R A+ +++ LP+ L+ DD CAIC + ++ CNH FH CLR W
Sbjct: 463 KTFMNRRTAVKKINS-LPELKGSRLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKW 521
Query: 296 LDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVS 330
L + + +CP C + +++ +++ NS ++
Sbjct: 522 LY--IQD--TCPMCHQKVYI-EDDVKDNSNISNIN 551
Score = 46 (21.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 FVLAVDIFWIRMCLLLFKTLDSSMFLL 124
F ++ D FW +C L+ DS++ +L
Sbjct: 212 FFISWDDFWDLICNLIISGCDSTLTVL 238
>UNIPROTKB|E1BP63 [details] [associations]
symbol:RNF139 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0070613 "regulation of protein processing"
evidence=IEA] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0031396 "regulation
of protein ubiquitination" evidence=IEA] [GO:0017148 "negative
regulation of translation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0005783 GO:GO:0008285
GO:GO:0017148 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GeneTree:ENSGT00530000062938
GO:GO:0031396 GO:GO:0060628 GO:GO:0070613 OMA:RIRFPDI
InterPro:IPR025754 Pfam:PF13705 EMBL:DAAA02038151 IPI:IPI00707240
Ensembl:ENSBTAT00000027187 Uniprot:E1BP63
Length = 668
Score = 130 (50.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 34/120 (28%), Positives = 61/120 (50%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 295
K F+ R A+ +++ LP+ L+ DD CAIC + ++ CNH FH CLR W
Sbjct: 520 KTFMNRRTAVKKINS-LPEIKGSRLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKW 578
Query: 296 LDQGLNEMYSCPTCRKPLFVGRREIEANSRP----GEVSSDE---QLARQLSMGLDRQNN 348
L + + +CP C + +++ +I+ N+ G ++ +E + R+ + DR+ N
Sbjct: 579 LY--IQD--TCPMCHQKVYI-EDDIKDNTNTSNNNGFIAPNENPEEAVREAAAESDRELN 633
Score = 48 (22.0 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 98 FVLAVDIFWIRMCLLLFKTLDSSMFLL 124
F L+ D FW +C L+ DS++ +L
Sbjct: 269 FFLSWDDFWDLICNLIISGCDSTLTVL 295
>UNIPROTKB|I3LM12 [details] [associations]
symbol:RNF139 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070613 "regulation of protein processing"
evidence=IEA] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0031396 "regulation
of protein ubiquitination" evidence=IEA] [GO:0017148 "negative
regulation of translation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00530000062938
CTD:11236 KO:K15703 OMA:RIRFPDI InterPro:IPR025754 Pfam:PF13705
EMBL:CU468433 RefSeq:XP_001927566.1 ProteinModelPortal:I3LM12
Ensembl:ENSSSCT00000030960 GeneID:100156613 KEGG:ssc:100156613
Uniprot:I3LM12
Length = 665
Score = 131 (51.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 28/95 (29%), Positives = 50/95 (52%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 295
K F+ R A+ +++ LP+ L+ DD CAIC + ++ CNH FH CLR W
Sbjct: 517 KTFMNRRTAVKKINS-LPELKGSRLQEIDDVCAICYHEFTTSARITPCNHYFHALCLRKW 575
Query: 296 LDQGLNEMYSCPTCRKPLFVGRREIEANSRPGEVS 330
L + + +CP C + +++ +++ NS ++
Sbjct: 576 LY--IQD--TCPMCHQKVYI-EDDVKDNSNISNIN 605
Score = 46 (21.3 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 FVLAVDIFWIRMCLLLFKTLDSSMFLL 124
F ++ D FW +C L+ DS++ +L
Sbjct: 266 FFISWDDFWDLICNLIISGCDSTLTVL 292
>SGD|S000005373 [details] [associations]
symbol:HRD1 "Ubiquitin-protein ligase" species:4932
"Saccharomyces cerevisiae" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IGI;IDA;IMP;IPI] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=ISM;IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0031505
"fungal-type cell wall organization" evidence=IGI] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA;IDA] [GO:0000838 "Hrd1p ubiquitin
ligase ERAD-M complex" evidence=IDA] [GO:0000839 "Hrd1p ubiquitin
ligase ERAD-L complex" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
SGD:S000005373 Prosite:PS00518 GO:GO:0016021 EMBL:BK006948
GO:GO:0046872 GO:GO:0008270 GO:GO:0031505 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0030433 GO:GO:0004842 eggNOG:COG5243
GeneTree:ENSGT00530000062938 GO:GO:0000839 KO:K10601
OrthoDB:EOG4W3WW9 EMBL:Z74755 PIR:S66695 RefSeq:NP_014630.1
ProteinModelPortal:Q08109 SMR:Q08109 DIP:DIP-8850N IntAct:Q08109
MINT:MINT-1956720 STRING:Q08109 PaxDb:Q08109 EnsemblFungi:YOL013C
GeneID:854149 KEGG:sce:YOL013C CYGD:YOL013c HOGENOM:HOG000112947
OMA:SATRISA NextBio:975899 Genevestigator:Q08109 GermOnline:YOL013C
GO:GO:0000838 Uniprot:Q08109
Length = 551
Score = 109 (43.4 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 26/101 (25%), Positives = 48/101 (47%)
Query: 277 KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEANS--RPGEVSSDEQ 334
K K+L C H+ HL+CL++W+++ +CP CR P+F + + + ++++
Sbjct: 371 KPKRLPCGHILHLSCLKNWMERS----QTCPICRLPVFDEKGNVVQTTFTSNSDITTQTT 426
Query: 335 LARQLSMGLDRQN--NTGQTLPTGVFPNQTQPPVEGSPWRN 373
+ + D+Q N LPT T P + P +N
Sbjct: 427 VTDSTGIATDQQGFANEVDLLPT----RTTSPDIRIVPTQN 463
Score = 67 (28.6 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 35/107 (32%), Positives = 47/107 (43%)
Query: 9 LQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTVLCSLKMFQ 68
L + FGEL E ERL + I F+ + F + L L LK+F
Sbjct: 66 LTKLLFGELRLIEHEHIFERL-PFTIINTLFMSSLFHERYFFTVAFFGLL--LLYLKVFH 122
Query: 69 ALARDRLERL--NASPSATPWTY-FRVFSALLFVLAV-DIFWIRMCL 111
+ +DRLE L + + S T T F FS L +LAV D I C+
Sbjct: 123 WILKDRLEALLQSINDSTTMKTLIFSRFSFNLVLLAVVDYQIITRCI 169
>DICTYBASE|DDB_G0267718 [details] [associations]
symbol:DDB_G0267718 species:44689 "Dictyostelium
discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
PROSITE:PS50089 SMART:SM00184 dictyBase:DDB_G0267718
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 EMBL:AAFI02000003
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
eggNOG:NOG329292 RefSeq:XP_647253.1 ProteinModelPortal:Q55GD1
EnsemblProtists:DDB0189490 GeneID:8616058 KEGG:ddi:DDB_G0267718
InParanoid:Q55GD1 Uniprot:Q55GD1
Length = 592
Score = 128 (50.1 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 39/119 (32%), Positives = 63/119 (52%)
Query: 203 YIHIWWLRG-MAFHLVDAILFLNIRALLSAIIKRIKGFIK-LRIALGHLHAAL--PDATS 258
Y++ + G F V L++ ++ L+ II+R+K I LR+ + LH L AT
Sbjct: 466 YLYSFQANGDQIFSSVMVGLYITLK--LTIIIERMKLCISALRVYI--LHEVLYGKKATP 521
Query: 259 EELRAYDDECAICREPMAKAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCR-KPLFVG 316
+++ A D C+ICR + L CNH++ C+ +WL++ E +CP CR LF G
Sbjct: 522 DQINAAGDLCSICRSSLVSPIVLRCNHIYCENCVSTWLER---ER-TCPLCRCSILFAG 576
>DICTYBASE|DDB_G0286909 [details] [associations]
symbol:anapc11 "anaphase promoting complex subunit
11" species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0005680 "anaphase-promoting
complex" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 dictyBase:DDB_G0286909 Prosite:PS00518
GO:GO:0051301 GO:GO:0007067 GenomeReviews:CM000153_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
GO:GO:0004842 GO:GO:0005680 eggNOG:COG5194 KO:K03358 OMA:CGICRMP
EMBL:AAFI02000092 RefSeq:XP_637455.1 HSSP:Q9H0F5
ProteinModelPortal:Q54L48 EnsemblProtists:DDB0231277 GeneID:8625855
KEGG:ddi:DDB_G0286909 ProtClustDB:CLSZ2430052 InterPro:IPR024766
Pfam:PF12678 Uniprot:Q54L48
Length = 87
Score = 102 (41.0 bits), Expect = 0.00012, P = 0.00012
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 263 AYDDECAICREPMAKAKKL--LCNHLFHLACLRSWLDQGLNEMYSCPTCR 310
A+D C C+ P + +CNH FH+ C+ WL+ NE+ CP CR
Sbjct: 30 AFDGCCVDCKIPGDDCPPVWGVCNHAFHMHCILKWLNA--NELQQCPMCR 77
>UNIPROTKB|Q8WU17 [details] [associations]
symbol:RNF139 "E3 ubiquitin-protein ligase RNF139"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031396 "regulation of protein
ubiquitination" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=TAS] [GO:0016874 "ligase activity" evidence=TAS]
[GO:0017148 "negative regulation of translation" evidence=IDA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IMP;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IMP;IDA] [GO:0019787 "small conjugating protein ligase
activity" evidence=IDA] [GO:0070613 "regulation of protein
processing" evidence=IDA] [GO:0060628 "regulation of ER to Golgi
vesicle-mediated transport" evidence=IDA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0005783 GO:GO:0016021 GO:GO:0008285
EMBL:CH471060 GO:GO:0017148 GO:GO:0005789 GO:GO:0046872
GO:GO:0008270 GO:GO:0004872 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0031396 GO:GO:0060628 Orphanet:151 MIM:144700
GO:GO:0070613 EMBL:AF064800 EMBL:AF064801 EMBL:AK001602
EMBL:BC021571 EMBL:BC064636 IPI:IPI00289584 RefSeq:NP_009149.2
UniGene:Hs.730771 ProteinModelPortal:Q8WU17 SMR:Q8WU17
IntAct:Q8WU17 STRING:Q8WU17 PhosphoSite:Q8WU17 DMDM:74760542
PaxDb:Q8WU17 PRIDE:Q8WU17 Ensembl:ENST00000303545 GeneID:11236
KEGG:hsa:11236 UCSC:uc003yrc.3 CTD:11236 GeneCards:GC08P125487
HGNC:HGNC:17023 HPA:HPA001202 MIM:603046 neXtProt:NX_Q8WU17
PharmGKB:PA134945850 eggNOG:NOG246550 HOGENOM:HOG000267029
HOVERGEN:HBG053146 InParanoid:Q8WU17 KO:K15703 OMA:RIRFPDI
OrthoDB:EOG4H4638 PhylomeDB:Q8WU17 GenomeRNAi:11236 NextBio:42766
ArrayExpress:Q8WU17 Bgee:Q8WU17 CleanEx:HS_RNF139
Genevestigator:Q8WU17 GermOnline:ENSG00000170881 InterPro:IPR025754
Pfam:PF13705 Uniprot:Q8WU17
Length = 664
Score = 126 (49.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 28/89 (31%), Positives = 48/89 (53%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 295
K F+ R A+ +++ LP+ L+ +D CAIC + ++ CNH FH CLR W
Sbjct: 517 KTFMNRRTAVKKINS-LPEIKGSRLQEINDVCAICYHEFTTSARITPCNHYFHALCLRKW 575
Query: 296 LDQGLNEMYSCPTCRKPLFVGRREIEANS 324
L + + +CP C + +++ +I+ NS
Sbjct: 576 LY--IQD--TCPMCHQKVYI-EDDIKDNS 599
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 98 FVLAVDIFWIRMCLLLFKTLDSSMFLL 124
F ++ D FW +C L+ DS++ +L
Sbjct: 266 FFISWDDFWDLICNLIISGCDSTLTVL 292
>UNIPROTKB|Q9BV68 [details] [associations]
symbol:RNF126 "RING finger protein 126" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 Prosite:PS00518 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:AK000559 EMBL:BC001442 EMBL:BC025374
IPI:IPI00155562 IPI:IPI00745921 RefSeq:NP_919442.1 UniGene:Hs.69554
ProteinModelPortal:Q9BV68 SMR:Q9BV68 IntAct:Q9BV68
MINT:MINT-1032305 STRING:Q9BV68 PhosphoSite:Q9BV68 DMDM:74762712
PaxDb:Q9BV68 PRIDE:Q9BV68 Ensembl:ENST00000292363 GeneID:55658
KEGG:hsa:55658 UCSC:uc010drs.3 GeneCards:GC19M000647
H-InvDB:HIX0014558 HGNC:HGNC:21151 HPA:HPA043050 neXtProt:NX_Q9BV68
PharmGKB:PA134876469 InParanoid:Q9BV68 PhylomeDB:Q9BV68
ChiTaRS:RNF126 GenomeRNAi:55658 NextBio:60383 ArrayExpress:Q9BV68
Bgee:Q9BV68 CleanEx:HS_RNF126 Genevestigator:Q9BV68
GermOnline:ENSG00000070423 Uniprot:Q9BV68
Length = 326
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 38/118 (32%), Positives = 53/118 (44%)
Query: 252 ALPDA-TSEELRAYDDECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCP 307
ALP +EE EC +C++ A + ++L CNHLFH C+ WL+Q ++ SCP
Sbjct: 212 ALPTVPVTEEHVGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWLEQ--HD--SCP 267
Query: 308 TCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQTLPTGVFPNQTQPP 365
CRK L G+ A + PG + S N P G + QPP
Sbjct: 268 VCRKSL-TGQNT--ATNPPGLTGVSFSSSSSSSSSSSPSNENATWSPLG----RPQPP 318
>RGD|1306011 [details] [associations]
symbol:Rnf126 "ring finger protein 126" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
RGD:1306011 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OMA:GQNTATD OrthoDB:EOG4VQ9PZ EMBL:BC099810 IPI:IPI00369174
RefSeq:NP_001028874.1 UniGene:Rn.143411 SMR:Q499Q1
Ensembl:ENSRNOT00000012317 GeneID:314613 KEGG:rno:314613
UCSC:RGD:1306011 InParanoid:Q499Q1 NextBio:667904
Genevestigator:Q499Q1 Uniprot:Q499Q1
Length = 328
Score = 122 (48.0 bits), Expect = 0.00014, P = 0.00014
Identities = 32/80 (40%), Positives = 45/80 (56%)
Query: 252 ALPDA-TSEELRAYDDECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCP 307
ALP +EE EC +C+E A + ++L CNHLFH +C+ WL+Q ++ SCP
Sbjct: 229 ALPTVPVTEEHVGSGLECPVCKEDYALGERVRQLPCNHLFHDSCIVPWLEQ--HD--SCP 284
Query: 308 TCRKPLFVGRREIEANSRPG 327
CRK L G+ A + PG
Sbjct: 285 VCRKSL-TGQNT--ATNPPG 301
>MGI|MGI:1917544 [details] [associations]
symbol:Rnf126 "ring finger protein 126" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 MGI:MGI:1917544
Prosite:PS00518 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GeneTree:ENSGT00530000062967 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 CTD:55658
OrthoDB:EOG4VQ9PZ EMBL:BC016543 IPI:IPI00130263 RefSeq:NP_653111.1
UniGene:Mm.466670 PDB:2ECT PDBsum:2ECT ProteinModelPortal:Q91YL2
SMR:Q91YL2 PhosphoSite:Q91YL2 PaxDb:Q91YL2 PRIDE:Q91YL2
Ensembl:ENSMUST00000047203 GeneID:70294 KEGG:mmu:70294
InParanoid:Q91YL2 OMA:RSADNGS EvolutionaryTrace:Q91YL2
NextBio:331326 Bgee:Q91YL2 CleanEx:MM_RNF126 Genevestigator:Q91YL2
GermOnline:ENSMUSG00000035890 Uniprot:Q91YL2
Length = 313
Score = 120 (47.3 bits), Expect = 0.00022, P = 0.00021
Identities = 32/80 (40%), Positives = 44/80 (55%)
Query: 252 ALPDA-TSEELRAYDDECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCP 307
ALP +EE EC +C+E A ++L CNHLFH +C+ WL+Q ++ SCP
Sbjct: 214 ALPTVPVTEEHVGSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQ--HD--SCP 269
Query: 308 TCRKPLFVGRREIEANSRPG 327
CRK L G+ A + PG
Sbjct: 270 VCRKSL-TGQNT--ATNPPG 286
>UNIPROTKB|Q8TEB7 [details] [associations]
symbol:RNF128 "E3 ubiquitin-protein ligase RNF128"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] [GO:0012505 "endomembrane
system" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137 EMBL:AF394689
Pfam:PF02225 Prosite:PS00518 GO:GO:0005783 GO:GO:0016021
GO:GO:0005794 GO:GO:0048471 GO:GO:0046872
Pathway_Interaction_DB:nfat_tfpathway GO:GO:0008270 GO:GO:0012505
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 HOGENOM:HOG000231432 HOVERGEN:HBG057659 CTD:79589
eggNOG:NOG271676 KO:K10629 EMBL:AK027169 EMBL:AK074264
EMBL:AK126553 EMBL:AL391315 EMBL:AL606833 EMBL:BC056677
EMBL:BC063404 IPI:IPI00152698 IPI:IPI00376602 RefSeq:NP_078815.3
RefSeq:NP_919445.1 UniGene:Hs.496542 PDB:3ICU PDBsum:3ICU
ProteinModelPortal:Q8TEB7 SMR:Q8TEB7 IntAct:Q8TEB7 STRING:Q8TEB7
PhosphoSite:Q8TEB7 DMDM:74751443 PRIDE:Q8TEB7 DNASU:79589
Ensembl:ENST00000255499 Ensembl:ENST00000324342 GeneID:79589
KEGG:hsa:79589 UCSC:uc004emk.3 UCSC:uc004eml.3
GeneCards:GC0XP105937 HGNC:HGNC:21153 HPA:HPA019675 MIM:300439
neXtProt:NX_Q8TEB7 PharmGKB:PA134868457 InParanoid:Q8TEB7
OMA:HEASSMA PhylomeDB:Q8TEB7 EvolutionaryTrace:Q8TEB7
GenomeRNAi:79589 NextBio:68594 ArrayExpress:Q8TEB7 Bgee:Q8TEB7
CleanEx:HS_RNF128 Genevestigator:Q8TEB7 Uniprot:Q8TEB7
Length = 428
Score = 122 (48.0 bits), Expect = 0.00023, P = 0.00023
Identities = 36/130 (27%), Positives = 57/130 (43%)
Query: 245 ALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSWLDQGLN 301
A+G L +E+ D CA+C E P + L CNH+FH C+ WL
Sbjct: 254 AIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWL----L 309
Query: 302 EMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLD--RQNNTGQTLPTGVFP 359
E +CP C+ + IE + G VS ++ ++S ++N +T +G
Sbjct: 310 EHRTCPMCKCDILKALG-IEVDVEDGSVSLQVPVSNEISNSASSHEEDNRSETASSGYAS 368
Query: 360 NQ--TQPPVE 367
Q +PP+E
Sbjct: 369 VQGTDEPPLE 378
>UNIPROTKB|F1PCH2 [details] [associations]
symbol:RNF126 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 OMA:GQNTATD EMBL:AAEX03012674
Ensembl:ENSCAFT00000031336 Uniprot:F1PCH2
Length = 305
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 38/123 (30%), Positives = 53/123 (43%)
Query: 252 ALPDA-TSEELRAYDDECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCP 307
ALP +EE EC +C++ + ++L C+HLFH C+ WL Q ++ SCP
Sbjct: 191 ALPTVPVTEEHVGSGLECPVCKDDYGLGERVRQLPCSHLFHDGCIVPWLQQ--HD--SCP 246
Query: 308 TCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLDRQNNTGQTLPTGVFPNQTQPPVE 367
CRK L G+ A + PG + S N P G P PP
Sbjct: 247 VCRKSL-TGQNT--ATNPPGLTGVSFSSSSSSSSSSSPSNENPDWSPPGRPP--CPPPSR 301
Query: 368 GSP 370
G+P
Sbjct: 302 GAP 304
>TAIR|locus:2147152 [details] [associations]
symbol:AIP2 "ABI3-interacting protein 2" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0016567 "protein ubiquitination"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009788
"negative regulation of abscisic acid mediated signaling pathway"
evidence=IMP] [GO:0006865 "amino acid transport" evidence=RCA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005829 GO:GO:0009737
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009738
GO:GO:0046872 GO:GO:0008270 GO:GO:0009788 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AJ251087 EMBL:DQ059130 EMBL:AF296834
EMBL:AY081329 EMBL:BT000238 IPI:IPI00545960 RefSeq:NP_197591.1
UniGene:At.1134 UniGene:At.68499 HSSP:Q9LRB7
ProteinModelPortal:Q8RXD3 SMR:Q8RXD3 IntAct:Q8RXD3 STRING:Q8RXD3
PaxDb:Q8RXD3 PRIDE:Q8RXD3 EnsemblPlants:AT5G20910.1 GeneID:832215
KEGG:ath:AT5G20910 TAIR:At5g20910 eggNOG:COG5540
HOGENOM:HOG000243158 InParanoid:Q8RXD3 KO:K16274 OMA:MQELPCK
PhylomeDB:Q8RXD3 ProtClustDB:CLSN2687405 Genevestigator:Q8RXD3
GO:GO:0004842 Uniprot:Q8RXD3
Length = 310
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 30/83 (36%), Positives = 44/83 (53%)
Query: 257 TSEELRAY--DDECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRK 311
T E L+ + + EC IC+E + K ++L C H FH CL+ WLD E SCP CR
Sbjct: 217 TEELLKKFGAEAECCICKENLVIGDKMQELPCKHTFHPPCLKPWLD----EHNSCPICRH 272
Query: 312 PLFVGRREIEANSRPGEVSSDEQ 334
L ++ E N + E ++E+
Sbjct: 273 ELPTDDQKYE-NWKEREKEAEEE 294
>UNIPROTKB|Q29RU0 [details] [associations]
symbol:RNF128 "E3 ubiquitin-protein ligase RNF128"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0012505 "endomembrane system" evidence=IEA]
[GO:0016874 "ligase activity" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 InterPro:IPR003137 Pfam:PF02225
Prosite:PS00518 GO:GO:0016021 GO:GO:0048471 GO:GO:0046872
GO:GO:0016874 GO:GO:0008270 GO:GO:0012505 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 HOGENOM:HOG000231432
HOVERGEN:HBG057659 EMBL:BC114021 IPI:IPI00715186
RefSeq:NP_001069539.1 UniGene:Bt.29416 ProteinModelPortal:Q29RU0
PRIDE:Q29RU0 GeneID:535869 KEGG:bta:535869 CTD:79589
eggNOG:NOG271676 InParanoid:Q29RU0 KO:K10629 OrthoDB:EOG4JT06C
NextBio:20876846 Uniprot:Q29RU0
Length = 431
Score = 121 (47.7 bits), Expect = 0.00030, P = 0.00030
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 245 ALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSWLDQGLN 301
A+G L +E+ D CA+C E P + L CNH+FH C+ WL
Sbjct: 257 AIGRLQLRTQKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHVFHKTCVDPWL----L 312
Query: 302 EMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLD--RQNNTGQTLPTGVFP 359
E +CP C+ + IE + G VS ++ + S ++N +T +G
Sbjct: 313 EHRTCPMCKCDILKALG-IEVDVEDGSVSLQVPVSNETSSNASPHEEDNRSETASSGYAS 371
Query: 360 NQ--TQPPVE 367
Q +PP+E
Sbjct: 372 VQGADEPPLE 381
>CGD|CAL0000884 [details] [associations]
symbol:orf19.7644 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005680
"anaphase-promoting complex" evidence=IEA] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA]
InterPro:IPR001841 InterPro:IPR024991 Pfam:PF12861 PROSITE:PS50089
SMART:SM00184 CGD:CAL0000884 GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0005680 EMBL:AACQ01000032 eggNOG:COG5194 HOGENOM:HOG000171951
KO:K03358 RefSeq:XP_719403.1 ProteinModelPortal:Q5ACJ8
STRING:Q5ACJ8 GeneID:3639005 KEGG:cal:CaO19.7644 Uniprot:Q5ACJ8
Length = 133
Score = 98 (39.6 bits), Expect = 0.00033, P = 0.00033
Identities = 24/76 (31%), Positives = 39/76 (51%)
Query: 263 AYDDECAICREPMAKAKKLL---CNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRRE 319
+YD C C+ P + +L C H FHL C+ WL+Q ++ CP CR+ +F + +
Sbjct: 35 SYDGTCPNCKYPGDQCPIVLGSGCTHNFHLHCILKWLEQETSKGL-CPMCRQ-IFTFKEQ 92
Query: 320 IEANSRPGEVSSDEQL 335
P EV+ ++L
Sbjct: 93 --KKQTPEEVAKLKKL 106
>UNIPROTKB|F1MCR4 [details] [associations]
symbol:RNF128 "E3 ubiquitin-protein ligase RNF128"
species:9913 "Bos taurus" [GO:0042036 "negative regulation of
cytokine biosynthetic process" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005783 GO:GO:0005794 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 IPI:IPI00715186
UniGene:Bt.29416 OMA:HEASSMA EMBL:DAAA02071287
ProteinModelPortal:F1MCR4 Ensembl:ENSBTAT00000031148 Uniprot:F1MCR4
Length = 431
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 245 ALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSWLDQGLN 301
A+G L +E+ D CA+C E P + L CNH+FH C+ WL
Sbjct: 257 AIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHVFHKTCVDPWL----L 312
Query: 302 EMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLD--RQNNTGQTLPTGVFP 359
E +CP C+ + IE + G VS ++ + S ++N +T +G
Sbjct: 313 EHRTCPMCKCDILKALG-IEVDVEDGSVSLQVPVSNETSSNASPHEEDNRSETASSGYAS 371
Query: 360 NQ--TQPPVE 367
Q +PP+E
Sbjct: 372 VQGADEPPLE 381
>UNIPROTKB|E2RG93 [details] [associations]
symbol:RNF128 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0005783 GO:GO:0005794 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 CTD:79589 KO:K10629
OMA:HEASSMA EMBL:AAEX03026747 RefSeq:XP_549171.3
Ensembl:ENSCAFT00000028462 GeneID:492051 KEGG:cfa:492051
NextBio:20864714 Uniprot:E2RG93
Length = 431
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 245 ALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSWLDQGLN 301
A+G L +E+ D CA+C E P + L CNH+FH C+ WL
Sbjct: 257 AIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWL----L 312
Query: 302 EMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLD--RQNNTGQTLPTGVFP 359
E +CP C+ + IE + G VS ++ + S ++N +T +G
Sbjct: 313 EHRTCPMCKCDILKALG-IEVDVEDGSVSLQVPVSNETSNSASSHEEDNRSETASSGYAS 371
Query: 360 NQ--TQPPVE 367
Q +PP+E
Sbjct: 372 VQGADEPPLE 381
>UNIPROTKB|F1RXM2 [details] [associations]
symbol:LOC100515872 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0042036 "negative regulation of cytokine
biosynthetic process" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 InterPro:IPR003137 Pfam:PF02225
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00700000104211 KO:K10629 OMA:HEASSMA EMBL:CU638669
EMBL:CU914612 RefSeq:XP_003135339.3 Ensembl:ENSSSCT00000013723
GeneID:100515872 KEGG:ssc:100515872 Uniprot:F1RXM2
Length = 431
Score = 119 (46.9 bits), Expect = 0.00049, P = 0.00049
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 245 ALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSWLDQGLN 301
A+G L +E+ D CA+C E P + L CNH+FH C+ WL
Sbjct: 257 AIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWL----L 312
Query: 302 EMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLD--RQNNTGQTLPTGVFP 359
E +CP C+ + IE + G VS ++ + S ++N +T +G
Sbjct: 313 EHRTCPMCKCDILKALG-IEVDVEDGSVSLQVPVSNETSNSASPHEEDNRSETASSGYAS 371
Query: 360 NQ--TQPPVE 367
Q +PP+E
Sbjct: 372 VQGADEPPLE 381
>ASPGD|ASPL0000035856 [details] [associations]
symbol:AN10394 species:162425 "Emericella nidulans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005680 "anaphase-promoting complex" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0031145 "anaphase-promoting
complex-dependent proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR001841 InterPro:IPR024991 Pfam:PF12861
PROSITE:PS50089 SMART:SM00184 GO:GO:0046872 GO:GO:0008270
EMBL:BN001306 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0005680 HOGENOM:HOG000171951 OMA:CGICRMP
EnsemblFungi:CADANIAT00009679 Uniprot:C8VHR1
Length = 104
Score = 96 (38.9 bits), Expect = 0.00055, P = 0.00055
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 264 YDDECAICREPMAKAKKLL--CNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREI- 320
+D C C+ P LL C H FH+ CL +W+ Q ++ CP CR+ + + ++
Sbjct: 31 FDGTCPTCKFPGDDCSLLLGKCGHSFHMHCLMTWIQQESSKGL-CPMCRQSISTLQLQLP 89
Query: 321 EANS 324
ANS
Sbjct: 90 SANS 93
>TAIR|locus:2169263 [details] [associations]
symbol:AT5G43200 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:P28990
EMBL:AB017070 HOGENOM:HOG000131725 IPI:IPI00525479
RefSeq:NP_199134.1 UniGene:At.65630 ProteinModelPortal:Q9FHS5
SMR:Q9FHS5 PRIDE:Q9FHS5 EnsemblPlants:AT5G43200.1 GeneID:834338
KEGG:ath:AT5G43200 TAIR:At5g43200 eggNOG:NOG326307
InParanoid:Q9FHS5 PhylomeDB:Q9FHS5 ProtClustDB:CLSN2683040
Genevestigator:Q9FHS5 Uniprot:Q9FHS5
Length = 207
Score = 112 (44.5 bits), Expect = 0.00057, P = 0.00057
Identities = 31/87 (35%), Positives = 45/87 (51%)
Query: 239 FIKLRIALGH-LHAALPD-ATS--EELRAYDDE----CAICREPMAKAKKLL----CNHL 286
FI + + L H ++ +P AT +E+ ++E CAIC E ++ + C H
Sbjct: 119 FIIVSVKLTHKVYVVVPPLATDLDQEMSQGEEEESKTCAICLEELSTSDDYCELPNCTHC 178
Query: 287 FHLACLRSWLDQGLNEMYSCPTCRKPL 313
FH CL WL +G N SCP CRKP+
Sbjct: 179 FHEPCLTQWLIRGNN---SCPLCRKPV 202
>TAIR|locus:2153554 [details] [associations]
symbol:DAF "DEFECTIVE IN ANTHER DEHISCENCE1- ( DAD1-)
Activating Factor" species:3702 "Arabidopsis thaliana" [GO:0008270
"zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143
Prosite:PS00518 GO:GO:0016021 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 eggNOG:COG5540
HOGENOM:HOG000237642 ProtClustDB:CLSN2913382 EMBL:AB010692
EMBL:BX830198 IPI:IPI00517240 RefSeq:NP_196147.1 UniGene:At.49733
ProteinModelPortal:Q9FLC6 SMR:Q9FLC6 EnsemblPlants:AT5G05280.1
GeneID:830410 KEGG:ath:AT5G05280 TAIR:At5g05280 InParanoid:Q9FLC6
OMA:KMKATEC PhylomeDB:Q9FLC6 Genevestigator:Q9FLC6
GermOnline:AT5G05280 Uniprot:Q9FLC6
Length = 176
Score = 109 (43.4 bits), Expect = 0.00061, P = 0.00061
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 255 DATSEELRAYDDECAICREPMAKAK--KLL--CNHLFHLACLRSWLDQGLNEMYSCPTCR 310
D+ S EL+ EC IC + + ++L CNH FH+ C+ +WL L+ SCPTCR
Sbjct: 100 DSYSPELKMKATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWL---LSHS-SCPTCR 155
Query: 311 KPLFVGRREIEAN-SRPGE 328
+ L + AN SR G+
Sbjct: 156 QSLL--EHQTPANGSRRGD 172
>TAIR|locus:2007008 [details] [associations]
symbol:AT1G33480 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC051630
EMBL:AK220582 IPI:IPI00538312 PIR:F86458 RefSeq:NP_174614.2
UniGene:At.71262 ProteinModelPortal:Q570X5 SMR:Q570X5 PRIDE:Q570X5
EnsemblPlants:AT1G33480.1 GeneID:840242 KEGG:ath:AT1G33480
TAIR:At1g33480 eggNOG:NOG238959 HOGENOM:HOG000006232
InParanoid:Q570X5 PhylomeDB:Q570X5 ProtClustDB:CLSN2685663
Genevestigator:Q570X5 GermOnline:AT1G33480 Uniprot:Q570X5
Length = 261
Score = 114 (45.2 bits), Expect = 0.00067, P = 0.00067
Identities = 29/96 (30%), Positives = 46/96 (47%)
Query: 249 LHAALPDAT-SEELRAYDDECAICR---EPMAKAKKL-LCNHLFHLACLRSWLDQGLNEM 303
L LP E D +C++C +P K +++ +C H FH+ C+ WL
Sbjct: 80 LREMLPIVVFKESFTVMDSQCSVCLGDYQPNDKLQQIPVCKHTFHMDCIDLWLTSHT--- 136
Query: 304 YSCPTCRKPLFVGR-REIEANSRPGEVSSDEQLARQ 338
+CP CR L R R+ + + P VS DE+++ Q
Sbjct: 137 -TCPLCRLALIPSRSRQSQDDPVPSLVSPDEEVSSQ 171
>RGD|1561238 [details] [associations]
symbol:RGD1561238 "similar to ring finger protein 122 homolog"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 RGD:1561238 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GeneTree:ENSGT00700000104226
IPI:IPI00394572 Ensembl:ENSRNOT00000031701 Uniprot:F1LZF5
Length = 95
Score = 95 (38.5 bits), Expect = 0.00070, P = 0.00070
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 258 SEELRAYDDECAICREPMAKAKKLL----CNHLFHLACLRSWLDQGLNEMYSCPTCRKPL 313
+++L+ Y CA+C E K K L C H FH CL WL+ CP C KP+
Sbjct: 23 AKKLQLYGQTCAVCLEDF-KGKDELGVLPCQHAFHRKCLVKWLEVRC----VCPMCNKPI 77
>CGD|CAL0001749 [details] [associations]
symbol:orf19.719 species:5476 "Candida albicans" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0000838 "Hrd1p ubiquitin ligase ERAD-M
complex" evidence=IEA] [GO:0000839 "Hrd1p ubiquitin ligase ERAD-L
complex" evidence=IEA] [GO:0010620 "negative regulation of
transcription by transcription factor catabolism" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0031505 "fungal-type cell wall organization" evidence=IEA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
CGD:CAL0001749 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 eggNOG:COG5243 EMBL:AACQ01000135 KO:K10601
RefSeq:XP_713079.1 ProteinModelPortal:Q59U13 GeneID:3645277
KEGG:cal:CaO19.719 Uniprot:Q59U13
Length = 633
Score = 109 (43.4 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 259 EELRAYDDECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLF 314
E++ + +D I ++P + KKL C H+ HL CL+ WL++ SCP CR+ +F
Sbjct: 394 EDMHSVEDYQRIFKKPQSPRRSPKKLKCGHILHLGCLKEWLERS----DSCPLCRRKVF 448
Score = 56 (24.8 bits), Expect = 0.00076, Sum P(2) = 0.00076
Identities = 22/79 (27%), Positives = 35/79 (44%)
Query: 1 MVLVSDFPLQTIFFGELYPAETRKFVERLINYVIYKGTFLPLVIPPTVFQAGLWSVWLTV 60
+ L+ D LQ + FG L E E+L VI L L ++ + L++
Sbjct: 58 LFLIIDKSLQILLFGSLRMIEVEHLFEKLPICVI--NLLLNLATGDNNIIMNVFLMGLSM 115
Query: 61 LCSLKMFQALARDRLERLN 79
S K+F + DRL+ +N
Sbjct: 116 --SFKVFHVIMFDRLDYVN 132
>ZFIN|ZDB-GENE-061215-82 [details] [associations]
symbol:rnf115 "ring finger protein 115" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-061215-82 GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062967 CTD:27246 eggNOG:NOG235630
HOGENOM:HOG000116417 HOVERGEN:HBG059832 KO:K11982 OMA:STHFAEF
OrthoDB:EOG4VX262 EMBL:BX322530 EMBL:BC128879 IPI:IPI00803572
RefSeq:NP_001073542.1 UniGene:Dr.78061 SMR:A1A601
Ensembl:ENSDART00000090329 GeneID:790928 KEGG:dre:790928
InParanoid:A1A601 NextBio:20930412 Uniprot:A1A601
Length = 310
Score = 115 (45.5 bits), Expect = 0.00076, P = 0.00076
Identities = 24/77 (31%), Positives = 41/77 (53%)
Query: 267 ECAICREPMA---KAKKLLCNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFVGRREIEAN 323
EC +C+E ++L CNH FH C+ WL+ L++ +CP CRK L +++
Sbjct: 237 ECPVCKEDYTVGEPVRQLPCNHFFHSDCIVPWLE--LHD--TCPVCRKSLNGDESGTQSS 292
Query: 324 SRPGEVSSDEQLARQLS 340
S P +++D + + S
Sbjct: 293 SEPSSLNTDPRTPERWS 309
>RGD|1566282 [details] [associations]
symbol:Rnf128 "ring finger protein 128, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005770
"late endosome" evidence=IEA;ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0042036
"negative regulation of cytokine biosynthetic process"
evidence=IEA;ISO] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 InterPro:IPR003137 RGD:1566282 Pfam:PF02225
GO:GO:0005783 GO:GO:0005794 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0042036 GeneTree:ENSGT00700000104211 HOGENOM:HOG000231432
HOVERGEN:HBG057659 CTD:79589 eggNOG:NOG271676 KO:K10629
OrthoDB:EOG4JT06C OMA:HEASSMA EMBL:BC167061 IPI:IPI00955613
RefSeq:NP_001166820.1 UniGene:Rn.7002 Ensembl:ENSRNOT00000016100
GeneID:315911 KEGG:rno:315911 NextBio:670050 Genevestigator:B2RZ84
Uniprot:B2RZ84
Length = 428
Score = 117 (46.2 bits), Expect = 0.00081, P = 0.00081
Identities = 36/130 (27%), Positives = 56/130 (43%)
Query: 245 ALGHLHAALPDATSEELRAYDDECAICRE---PMAKAKKLLCNHLFHLACLRSWLDQGLN 301
A+G L +E+ D CA+C E P + L CNH+FH C+ WL
Sbjct: 254 AIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDVVRILTCNHIFHKTCVDPWL----L 309
Query: 302 EMYSCPTCRKPLFVGRREIEANSRPGEVSSDEQLARQLSMGLD--RQNNTGQTLPTGVFP 359
E +CP C+ + IE + G VS ++ + S ++N +T +G
Sbjct: 310 EHRTCPMCKCDILKALG-IEVDVEDGSVSLQVPVSNEASNTASPHEEDNRSETASSGYAS 368
Query: 360 NQ--TQPPVE 367
Q +PP+E
Sbjct: 369 VQGADEPPLE 378
>TAIR|locus:2102569 [details] [associations]
symbol:RZF1 "AT3G56580" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008270
"zinc ion binding" evidence=ISS] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IDA] [GO:0009414 "response to water
deprivation" evidence=IEP] [GO:1902006 "negative regulation of
proline biosynthetic process" evidence=IMP] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 eggNOG:NOG235630
KO:K11982 HOGENOM:HOG000237766 ProtClustDB:CLSN2688851
EMBL:AY045983 EMBL:AY096613 EMBL:DQ059114 IPI:IPI00530247
RefSeq:NP_001030874.1 RefSeq:NP_567039.1 RefSeq:NP_974448.1
UniGene:At.26186 ProteinModelPortal:Q94AK4 SMR:Q94AK4 STRING:Q94AK4
EnsemblPlants:AT3G56580.1 EnsemblPlants:AT3G56580.2
EnsemblPlants:AT3G56580.3 GeneID:824825 KEGG:ath:AT3G56580
TAIR:At3g56580 InParanoid:Q94AK4 OMA:AYYNETA PhylomeDB:Q94AK4
ArrayExpress:Q94AK4 Genevestigator:Q94AK4 Uniprot:Q94AK4
Length = 320
Score = 115 (45.5 bits), Expect = 0.00081, P = 0.00081
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 252 ALPDA--TSEELRAYDDECAICREPM---AKAKKLLCNHLFHLACLRSWLDQGLNEMYSC 306
ALP T + L++ D C +C++ ++AK++ C+H++H C+ WL Q N SC
Sbjct: 168 ALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQH-N---SC 223
Query: 307 PTCRKPL 313
P CRK L
Sbjct: 224 PVCRKEL 230
>ZFIN|ZDB-GENE-080401-4 [details] [associations]
symbol:rnf139 "ring finger protein 139" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 ZFIN:ZDB-GENE-080401-4
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
GeneTree:ENSGT00530000062938 CTD:11236 eggNOG:NOG246550
HOGENOM:HOG000267029 HOVERGEN:HBG053146 KO:K15703 OMA:RIRFPDI
OrthoDB:EOG4H4638 InterPro:IPR025754 Pfam:PF13705 EMBL:CABZ01067086
EMBL:BC160659 IPI:IPI00613494 RefSeq:NP_001116520.1
UniGene:Dr.119244 STRING:B1H1M0 Ensembl:ENSDART00000053622
Ensembl:ENSDART00000122054 Ensembl:ENSDART00000129713
GeneID:100144552 KEGG:dre:100144552 NextBio:20791441 Uniprot:B1H1M0
Length = 664
Score = 127 (49.8 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 237 KGFIKLRIALGHLHAALPDATSEELRAYDDECAICREPMAKAKKLL-CNHLFHLACLRSW 295
K FI R A+ +++ LP+ LR +D CAIC + + ++ C+H FH CLR W
Sbjct: 507 KTFINRRTAVKKINS-LPEVRGSRLRDIEDVCAICYQEFGSSARITPCSHYFHALCLRKW 565
Query: 296 LDQGLNEMYSCPTCRKPLFV 315
L + + +CP C + +++
Sbjct: 566 LY--IQD--TCPMCHQRVYI 581
Score = 37 (18.1 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 7/14 (50%), Positives = 10/14 (71%)
Query: 192 DMATLLMALGHYIH 205
+M LL A+ H+IH
Sbjct: 345 NMCLLLTAILHFIH 358
>TAIR|locus:2142449 [details] [associations]
symbol:RING1 species:3702 "Arabidopsis thaliana"
[GO:0005576 "extracellular region" evidence=ISM] [GO:0008270 "zinc
ion binding" evidence=IEA;ISS] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0002238 "response to molecule of fungal origin"
evidence=IEP] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP;RCA] [GO:0012501
"programmed cell death" evidence=IC] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0043068 "positive regulation of
programmed cell death" evidence=IMP] [GO:0051865 "protein
autoubiquitination" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009862 "systemic acquired resistance, salicylic
acid mediated signaling pathway" evidence=RCA] [GO:0009867
"jasmonic acid mediated signaling pathway" evidence=RCA]
[GO:0010310 "regulation of hydrogen peroxide metabolic process"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0019761 "glucosinolate biosynthetic
process" evidence=RCA] [GO:0031348 "negative regulation of defense
response" evidence=RCA] [GO:0034976 "response to endoplasmic
reticulum stress" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518
GO:GO:0016021 GO:GO:0005886 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006915 GO:GO:0009617 GO:GO:0006952 GO:GO:0046872
GO:GO:0008270 GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL353995 eggNOG:COG5540 GO:GO:0004842 GO:GO:0051865
EMBL:AK176500 IPI:IPI00537935 PIR:T50001 RefSeq:NP_196600.1
UniGene:At.1824 ProteinModelPortal:Q9LX93 SMR:Q9LX93 STRING:Q9LX93
EnsemblPlants:AT5G10380.1 GeneID:830902 KEGG:ath:AT5G10380
TAIR:At5g10380 HOGENOM:HOG000034176 InParanoid:Q9LX93 OMA:LHRSAIN
PhylomeDB:Q9LX93 ProtClustDB:CLSN2914912 Genevestigator:Q9LX93
GermOnline:AT5G10380 GO:GO:0043068 GO:GO:0012501 GO:GO:0002238
Uniprot:Q9LX93
Length = 301
Score = 114 (45.2 bits), Expect = 0.00093, P = 0.00093
Identities = 30/90 (33%), Positives = 45/90 (50%)
Query: 267 ECAICREPMAKAK--KLL--CNHLFHLACLRSWLDQGLNEMYSCPTCRKPLFV----GRR 318
EC++C + + +LL C+H FHL C+ +WL N CP CR P+ + +
Sbjct: 134 ECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKN----CPLCRAPVLLITEPPHQ 189
Query: 319 EIEANSRPGEVSSDEQLARQLSMGLDRQNN 348
E E N +P SS++ RQ S R +N
Sbjct: 190 ETETNHQPDSESSNDLRGRQDSSRSRRNHN 219
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.325 0.137 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 517 500 0.00084 119 3 11 22 0.45 33
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 81
No. of states in DFA: 628 (67 KB)
Total size of DFA: 315 KB (2159 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 42.50u 0.08s 42.58t Elapsed: 00:00:02
Total cpu time: 42.51u 0.08s 42.59t Elapsed: 00:00:02
Start: Mon May 20 23:18:41 2013 End: Mon May 20 23:18:43 2013