Query 010131
Match_columns 517
No_of_seqs 625 out of 4099
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 20:35:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010131.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010131hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 1.5E-56 5.1E-61 439.2 18.7 259 196-473 42-320 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 7.8E-57 2.7E-61 435.2 14.5 260 195-473 13-290 (299)
3 4gt4_A Tyrosine-protein kinase 100.0 1.3E-56 4.4E-61 435.6 14.9 263 190-471 21-305 (308)
4 3omv_A RAF proto-oncogene seri 100.0 2E-55 6.7E-60 425.4 18.9 259 195-472 36-300 (307)
5 4g3f_A NF-kappa-beta-inducing 100.0 4.2E-54 1.4E-58 420.1 20.6 261 197-482 60-326 (336)
6 4fih_A Serine/threonine-protei 100.0 4.3E-54 1.5E-58 421.2 18.0 247 197-465 76-323 (346)
7 4b9d_A Serine/threonine-protei 100.0 3.7E-54 1.3E-58 422.3 17.6 249 196-465 25-276 (350)
8 3fpq_A Serine/threonine-protei 100.0 2.3E-53 7.7E-58 408.0 20.5 244 198-465 29-282 (290)
9 3hmm_A TGF-beta receptor type- 100.0 3E-53 1E-57 412.8 18.2 267 197-474 5-299 (303)
10 4ase_A Vascular endothelial gr 100.0 8.5E-54 2.9E-58 423.0 14.1 266 191-474 60-349 (353)
11 4fie_A Serine/threonine-protei 100.0 7.4E-53 2.5E-57 422.5 20.4 247 197-465 153-400 (423)
12 4aw0_A HPDK1, 3-phosphoinositi 100.0 3.3E-53 1.1E-57 408.8 14.4 247 196-465 33-284 (311)
13 3hyh_A Carbon catabolite-derep 100.0 5.7E-52 2E-56 394.8 20.0 244 196-465 14-262 (275)
14 3ubd_A Ribosomal protein S6 ki 100.0 4E-52 1.4E-56 401.3 11.3 241 196-460 25-271 (304)
15 4g31_A Eukaryotic translation 100.0 5.9E-51 2E-55 394.8 18.4 249 196-465 6-279 (299)
16 2qkw_B Protein kinase; three-h 100.0 6.4E-48 2.2E-52 380.2 24.6 276 197-475 41-318 (321)
17 4b99_A Mitogen-activated prote 100.0 6.6E-48 2.2E-52 387.5 20.9 259 196-465 55-344 (398)
18 3uim_A Brassinosteroid insensi 100.0 1.3E-47 4.5E-52 378.7 16.9 286 185-470 18-309 (326)
19 4f9c_A Cell division cycle 7-r 100.0 2.9E-47 1E-51 378.8 18.5 194 196-400 22-249 (361)
20 3uto_A Twitchin; kinase, muscl 100.0 1.9E-46 6.4E-51 395.0 18.7 250 196-465 158-410 (573)
21 3v5w_A G-protein coupled recep 100.0 1.6E-46 5.6E-51 393.0 17.5 246 197-465 191-449 (689)
22 3s95_A LIMK-1, LIM domain kina 100.0 2.3E-45 7.8E-50 360.1 21.5 259 196-476 11-286 (310)
23 3p86_A Serine/threonine-protei 100.0 2.3E-45 7.8E-50 359.6 20.0 262 194-475 36-301 (309)
24 2psq_A Fibroblast growth facto 100.0 4.7E-45 1.6E-49 366.4 19.6 263 195-476 81-368 (370)
25 3fxz_A Serine/threonine-protei 100.0 7.5E-45 2.6E-49 354.1 20.0 248 196-465 21-269 (297)
26 2nru_A Interleukin-1 receptor- 100.0 3.5E-44 1.2E-48 351.1 24.8 280 185-472 13-306 (307)
27 3soc_A Activin receptor type-2 100.0 2.7E-45 9.3E-50 361.4 15.8 267 195-474 24-320 (322)
28 3kul_A Ephrin type-A receptor 100.0 2E-45 6.9E-50 362.7 14.3 264 191-475 45-316 (325)
29 4hcu_A Tyrosine-protein kinase 100.0 3.5E-45 1.2E-49 351.2 15.6 257 195-473 10-267 (269)
30 3sxs_A Cytoplasmic tyrosine-pr 100.0 2E-45 7E-50 352.6 12.6 259 194-474 7-266 (268)
31 2c30_A Serine/threonine-protei 100.0 6E-44 2.1E-48 351.6 23.3 257 187-465 25-294 (321)
32 3zgw_A Maternal embryonic leuc 100.0 1.3E-44 4.3E-49 359.0 17.7 248 196-466 11-261 (347)
33 4eqm_A Protein kinase; transfe 100.0 1.2E-44 4.1E-49 352.2 17.1 264 195-476 11-279 (294)
34 3gen_A Tyrosine-protein kinase 100.0 1.1E-44 3.9E-49 350.3 15.5 260 193-474 22-282 (283)
35 3q4u_A Activin receptor type-1 100.0 2.3E-44 7.8E-49 351.3 17.6 260 195-470 8-300 (301)
36 3ugc_A Tyrosine-protein kinase 100.0 1.3E-44 4.6E-49 352.0 15.7 267 193-473 8-292 (295)
37 3tt0_A Basic fibroblast growth 100.0 4E-44 1.4E-48 361.5 19.3 273 191-482 65-362 (382)
38 3fe3_A MAP/microtubule affinit 100.0 5.8E-44 2E-48 352.2 19.4 245 196-465 16-264 (328)
39 2qol_A Ephrin receptor; recept 100.0 4.8E-45 1.6E-49 366.6 11.2 261 193-474 43-311 (373)
40 4euu_A Serine/threonine-protei 100.0 2.9E-43 9.9E-48 346.6 23.4 271 196-473 10-310 (319)
41 3cbl_A C-FES, proto-oncogene t 100.0 7.9E-45 2.7E-49 366.0 11.8 259 194-473 113-375 (377)
42 1csn_A Casein kinase-1; phosph 100.0 3.2E-43 1.1E-47 342.7 21.6 263 196-475 11-286 (298)
43 1opk_A P150, C-ABL, proto-onco 100.0 9.5E-45 3.2E-49 377.8 11.5 261 191-472 216-478 (495)
44 1qcf_A Haematopoetic cell kina 100.0 9.7E-45 3.3E-49 374.2 11.0 261 191-473 184-445 (454)
45 2izr_A Casein kinase I isoform 100.0 3.4E-43 1.2E-47 347.7 21.4 261 196-474 10-283 (330)
46 1mp8_A Focal adhesion kinase 1 100.0 6.2E-44 2.1E-48 344.8 15.4 260 194-475 14-279 (281)
47 1o6l_A RAC-beta serine/threoni 100.0 3.9E-43 1.3E-47 347.3 21.3 247 196-466 6-261 (337)
48 2eva_A TAK1 kinase - TAB1 chim 100.0 1.7E-43 5.7E-48 346.3 18.4 260 196-478 9-269 (307)
49 4e5w_A Tyrosine-protein kinase 100.0 1.1E-43 3.9E-48 346.6 16.9 268 191-472 17-302 (302)
50 3kfa_A Tyrosine-protein kinase 100.0 2.6E-44 8.8E-49 348.7 12.1 263 191-474 9-273 (288)
51 3niz_A Rhodanese family protei 100.0 1.3E-43 4.4E-48 347.7 16.9 260 196-465 22-300 (311)
52 3t9t_A Tyrosine-protein kinase 100.0 6.8E-44 2.3E-48 341.7 14.4 255 196-472 9-264 (267)
53 3lb7_A RAF proto-oncogene seri 100.0 1.7E-43 5.8E-48 346.1 17.3 265 191-474 32-302 (307)
54 1k9a_A Carboxyl-terminal SRC k 100.0 1.6E-43 5.6E-48 364.4 17.9 253 195-474 193-447 (450)
55 2y0a_A Death-associated protei 100.0 9.9E-43 3.4E-47 343.6 22.4 251 194-465 10-271 (326)
56 2yab_A Death-associated protei 100.0 7.5E-43 2.6E-47 348.4 21.5 249 196-465 13-272 (361)
57 3vhe_A Vascular endothelial gr 100.0 1E-43 3.6E-48 355.6 15.3 263 193-473 20-356 (359)
58 2ivs_A Proto-oncogene tyrosine 100.0 1.5E-43 5.2E-48 347.6 16.1 261 194-473 22-312 (314)
59 2bdw_A Hypothetical protein K1 100.0 7.5E-43 2.6E-47 349.2 21.3 254 192-466 26-285 (362)
60 3l9p_A Anaplastic lymphoma kin 100.0 7.4E-44 2.5E-48 357.4 14.0 266 191-475 67-348 (367)
61 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.7E-44 9.2E-49 370.5 11.0 261 192-474 181-442 (452)
62 1luf_A Muscle-specific tyrosin 100.0 2.2E-43 7.6E-48 350.9 17.1 261 195-474 47-337 (343)
63 3tki_A Serine/threonine-protei 100.0 1.6E-43 5.3E-48 348.9 15.7 251 196-466 8-262 (323)
64 4f0f_A Serine/threonine-protei 100.0 9.8E-43 3.3E-47 337.4 20.9 252 195-470 19-287 (287)
65 2zv2_A Calcium/calmodulin-depe 100.0 6.7E-43 2.3E-47 340.6 19.8 247 196-465 14-292 (298)
66 3lxp_A Non-receptor tyrosine-p 100.0 3.4E-44 1.2E-48 353.0 10.8 264 198-477 34-315 (318)
67 3qd2_B Eukaryotic translation 100.0 4.9E-43 1.7E-47 346.5 19.0 250 195-465 6-325 (332)
68 3soa_A Calcium/calmodulin-depe 100.0 3.6E-43 1.2E-47 359.9 18.1 252 194-465 10-267 (444)
69 3qup_A Tyrosine-protein kinase 100.0 4.2E-43 1.4E-47 346.0 17.8 263 194-475 22-301 (323)
70 1tki_A Titin; serine kinase, m 100.0 6.3E-43 2.2E-47 344.1 19.0 250 196-466 6-258 (321)
71 4fvq_A Tyrosine-protein kinase 100.0 1.3E-43 4.5E-48 343.9 13.8 256 193-475 6-278 (289)
72 3c0i_A Peripheral plasma membr 100.0 2.7E-43 9.3E-48 351.2 16.2 255 193-465 22-286 (351)
73 3dtc_A Mitogen-activated prote 100.0 4.6E-43 1.6E-47 336.8 17.1 249 196-470 8-271 (271)
74 4dc2_A Protein kinase C IOTA t 100.0 3.6E-43 1.2E-47 353.9 17.1 248 196-460 53-307 (396)
75 3poz_A Epidermal growth factor 100.0 6.8E-44 2.3E-48 352.3 11.4 258 194-473 14-279 (327)
76 1t46_A HOMO sapiens V-KIT hard 100.0 3.6E-43 1.2E-47 344.8 16.5 263 194-474 22-309 (313)
77 3kn6_A Ribosomal protein S6 ki 100.0 3.1E-43 1.1E-47 347.0 15.9 248 201-465 17-270 (325)
78 4fr4_A YANK1, serine/threonine 100.0 5.3E-43 1.8E-47 351.5 17.9 249 195-465 15-271 (384)
79 1qpc_A LCK kinase; alpha beta 100.0 1.9E-43 6.3E-48 341.1 14.0 259 194-474 12-271 (279)
80 3lxl_A Tyrosine-protein kinase 100.0 1.3E-44 4.5E-49 357.5 6.0 267 195-475 23-306 (327)
81 3mdy_A Bone morphogenetic prot 100.0 2.9E-42 9.8E-47 342.0 22.4 268 190-474 32-333 (337)
82 1ob3_A PFPK5, cell division co 100.0 7.1E-43 2.4E-47 338.7 17.6 259 197-465 4-280 (288)
83 3op5_A Serine/threonine-protei 100.0 1.3E-42 4.6E-47 348.2 19.9 269 195-475 35-332 (364)
84 2pvf_A Fibroblast growth facto 100.0 1.2E-42 4E-47 344.5 19.2 265 194-477 34-323 (334)
85 1rjb_A FL cytokine receptor; k 100.0 2.8E-43 9.6E-48 350.4 14.7 267 191-475 41-337 (344)
86 3cc6_A Protein tyrosine kinase 100.0 8.3E-43 2.8E-47 336.9 17.5 258 196-475 13-276 (281)
87 1b6c_B TGF-B superfamily recep 100.0 1.9E-42 6.6E-47 344.0 20.6 269 189-474 36-338 (342)
88 3gni_B Strad alpha; kinase fol 100.0 1.1E-42 3.9E-47 352.0 19.2 265 196-466 26-334 (389)
89 3kmu_A ILK, integrin-linked ki 100.0 1.2E-42 4E-47 333.6 18.3 252 195-472 10-270 (271)
90 1fot_A TPK1 delta, CAMP-depend 100.0 2.2E-42 7.4E-47 339.5 20.5 243 196-465 7-258 (318)
91 1kob_A Twitchin; kinase, intra 100.0 1.5E-42 5.3E-47 349.2 19.9 250 196-465 52-304 (387)
92 2h34_A Serine/threonine-protei 100.0 2.4E-42 8.3E-47 338.4 20.6 258 196-474 35-298 (309)
93 3o0g_A Cell division protein k 100.0 1.2E-42 4.1E-47 337.8 18.1 260 197-465 4-282 (292)
94 2x4f_A Myosin light chain kina 100.0 3E-42 1E-46 346.1 21.6 251 200-470 94-349 (373)
95 2wqm_A Serine/threonine-protei 100.0 2.8E-42 9.7E-47 338.1 20.8 265 196-477 33-302 (310)
96 3og7_A AKAP9-BRAF fusion prote 100.0 3.8E-43 1.3E-47 340.7 14.4 263 191-472 20-288 (289)
97 4eut_A Serine/threonine-protei 100.0 1.1E-42 3.8E-47 352.6 18.4 272 196-474 10-311 (396)
98 3h4j_B AMPK kdaid, SNF1-like p 100.0 3.8E-43 1.3E-47 347.1 14.4 245 196-466 10-259 (336)
99 3a8x_A Protein kinase C IOTA t 100.0 1.1E-42 3.9E-47 345.4 17.8 248 196-460 10-264 (345)
100 3ll6_A Cyclin G-associated kin 100.0 4.7E-43 1.6E-47 347.4 14.7 259 194-475 27-311 (337)
101 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.2E-43 1.4E-47 349.3 14.3 250 192-465 20-280 (353)
102 4hgt_A Casein kinase I isoform 100.0 5.9E-42 2E-46 333.3 22.0 264 195-475 9-283 (296)
103 3uzp_A CKI-delta, CKID, casein 100.0 8.9E-42 3E-46 332.1 23.2 263 196-475 10-283 (296)
104 2pmi_A Negative RE, cyclin-dep 100.0 9.4E-43 3.2E-47 342.5 16.3 262 196-465 6-293 (317)
105 3kex_A Receptor tyrosine-prote 100.0 7.1E-43 2.4E-47 344.7 15.5 256 196-473 14-277 (325)
106 4aw2_A Serine/threonine-protei 100.0 4.1E-43 1.4E-47 358.1 14.1 253 196-465 75-338 (437)
107 3v8s_A RHO-associated protein 100.0 3E-43 1E-47 356.5 12.4 251 196-466 70-330 (410)
108 3p1a_A MYT1 kinase, membrane-a 100.0 3.5E-42 1.2E-46 337.6 19.6 250 189-465 51-304 (311)
109 3ork_A Serine/threonine protei 100.0 9.2E-43 3.1E-47 341.7 15.4 259 196-473 13-282 (311)
110 3uc3_A Serine/threonine-protei 100.0 3.4E-42 1.1E-46 344.5 19.4 251 196-466 21-275 (361)
111 2buj_A Serine/threonine-protei 100.0 1.4E-42 4.6E-47 341.4 16.3 261 195-472 29-306 (317)
112 1u59_A Tyrosine-protein kinase 100.0 1.5E-42 5.2E-47 336.1 16.3 258 197-476 11-276 (287)
113 3pls_A Macrophage-stimulating 100.0 1.5E-42 5.2E-47 337.8 16.3 259 199-477 25-292 (298)
114 3lzb_A Epidermal growth factor 100.0 4.3E-43 1.5E-47 346.4 12.5 257 195-473 15-279 (327)
115 2h8h_A Proto-oncogene tyrosine 100.0 1.1E-43 3.7E-48 373.2 8.6 260 192-473 264-524 (535)
116 2a19_B Interferon-induced, dou 100.0 2.7E-42 9.2E-47 333.6 17.7 255 190-475 6-277 (284)
117 3g2f_A Bone morphogenetic prot 100.0 1.8E-42 6.3E-47 343.3 16.9 273 196-481 14-327 (336)
118 3f3z_A Calcium/calmodulin-depe 100.0 7.9E-42 2.7E-46 329.3 20.7 249 195-465 9-261 (277)
119 1xjd_A Protein kinase C, theta 100.0 1.1E-42 3.8E-47 345.0 15.1 245 196-464 18-268 (345)
120 3c1x_A Hepatocyte growth facto 100.0 3.5E-42 1.2E-46 345.5 18.8 258 197-475 91-358 (373)
121 3a62_A Ribosomal protein S6 ki 100.0 4.2E-42 1.5E-46 339.3 19.0 247 195-465 17-276 (327)
122 3dbq_A Dual specificity protei 100.0 3.3E-42 1.1E-46 342.4 18.4 249 196-466 10-274 (343)
123 1mqb_A Ephrin type-A receptor 100.0 3.8E-42 1.3E-46 340.5 18.7 262 193-475 42-312 (333)
124 3f66_A Hepatocyte growth facto 100.0 2.4E-42 8.4E-47 336.5 17.0 258 197-475 27-294 (298)
125 3hko_A Calcium/calmodulin-depe 100.0 4.9E-42 1.7E-46 341.5 19.5 256 194-465 25-330 (345)
126 2w1i_A JAK2; chromosomal rearr 100.0 3.4E-42 1.2E-46 339.9 18.0 266 194-473 40-323 (326)
127 2w4o_A Calcium/calmodulin-depe 100.0 2E-42 6.9E-47 344.6 16.4 248 196-465 54-305 (349)
128 1rdq_E PKA C-alpha, CAMP-depen 100.0 4.7E-42 1.6E-46 341.6 19.0 243 196-465 42-293 (350)
129 2xir_A Vascular endothelial gr 100.0 2.5E-42 8.6E-47 339.2 16.8 264 194-475 26-313 (316)
130 3g33_A Cell division protein k 100.0 1.1E-42 3.8E-47 340.7 13.9 266 190-465 4-296 (308)
131 3is5_A Calcium-dependent prote 100.0 8.1E-42 2.8E-46 330.7 19.8 251 195-465 22-278 (285)
132 4agu_A Cyclin-dependent kinase 100.0 1.2E-42 4E-47 340.9 13.8 261 196-466 4-285 (311)
133 2vd5_A DMPK protein; serine/th 100.0 7.9E-43 2.7E-47 353.6 13.0 252 196-465 62-327 (412)
134 2a2a_A Death-associated protei 100.0 1.2E-41 4E-46 335.4 20.9 251 194-465 11-272 (321)
135 2ozo_A Tyrosine-protein kinase 100.0 8.2E-42 2.8E-46 364.0 21.3 253 202-476 343-602 (613)
136 2eue_A Carbon catabolite derep 100.0 6.7E-42 2.3E-46 329.5 18.5 243 197-465 15-262 (275)
137 3gxj_A TGF-beta receptor type- 100.0 3.7E-44 1.3E-48 350.1 2.8 262 196-474 4-299 (303)
138 3dls_A PAS domain-containing s 100.0 2.9E-42 9.9E-47 341.5 16.4 242 194-466 23-275 (335)
139 1p4o_A Insulin-like growth fac 100.0 1.8E-42 6E-47 341.4 14.7 262 193-473 23-300 (322)
140 2yex_A Serine/threonine-protei 100.0 9.2E-42 3.2E-46 328.5 19.3 251 195-465 7-261 (276)
141 2v62_A Serine/threonine-protei 100.0 2.4E-42 8.2E-47 343.8 15.5 267 193-472 35-328 (345)
142 3brb_A Proto-oncogene tyrosine 100.0 9E-42 3.1E-46 334.9 19.3 262 194-474 33-310 (313)
143 2i0e_A Protein kinase C-beta I 100.0 4.1E-42 1.4E-46 342.0 16.7 247 195-465 20-276 (353)
144 1fvr_A Tyrosine-protein kinase 100.0 7.5E-43 2.6E-47 344.8 11.3 264 191-475 21-303 (327)
145 2zmd_A Dual specificity protei 100.0 9.3E-42 3.2E-46 344.8 19.5 249 196-466 57-321 (390)
146 1xbb_A Tyrosine-protein kinase 100.0 6E-42 2E-46 332.6 17.2 257 196-475 17-282 (291)
147 3cok_A Serine/threonine-protei 100.0 4.3E-42 1.5E-46 331.3 16.1 247 196-465 12-262 (278)
148 1u5q_A Serine/threonine protei 100.0 1E-41 3.5E-46 339.1 19.3 246 195-466 54-306 (348)
149 2y94_A 5'-AMP-activated protei 100.0 1.4E-41 4.7E-46 350.4 20.8 245 196-465 17-266 (476)
150 3fdn_A Serine/threonine-protei 100.0 2.9E-42 9.9E-47 332.7 14.8 245 196-466 10-258 (279)
151 2qr7_A Ribosomal protein S6 ki 100.0 3.3E-42 1.1E-46 341.7 15.5 251 194-465 21-277 (342)
152 2jam_A Calcium/calmodulin-depe 100.0 1.1E-41 3.7E-46 333.0 18.9 250 194-465 8-261 (304)
153 2jii_A Serine/threonine-protei 100.0 4.4E-42 1.5E-46 342.9 16.1 264 196-475 43-339 (352)
154 1byg_A CSK, protein (C-termina 100.0 1.2E-42 4E-47 335.3 11.4 253 195-474 21-275 (278)
155 2i1m_A Macrophage colony-stimu 100.0 5.1E-43 1.7E-47 346.9 8.6 263 194-474 45-328 (333)
156 3llt_A Serine/threonine kinase 100.0 1E-42 3.4E-47 348.7 10.6 201 191-401 31-262 (360)
157 2ac3_A MAP kinase-interacting 100.0 1.1E-41 3.8E-46 334.7 17.8 257 197-465 14-295 (316)
158 3eqc_A Dual specificity mitoge 100.0 2.8E-42 9.6E-47 345.4 13.4 255 194-466 32-325 (360)
159 3kk8_A Calcium/calmodulin depe 100.0 2.8E-41 9.6E-46 326.6 19.9 249 196-465 7-261 (284)
160 1t4h_A Serine/threonine-protei 100.0 3.3E-41 1.1E-45 327.2 20.4 245 197-465 28-282 (290)
161 3bhy_A Death-associated protei 100.0 2.7E-41 9.2E-46 326.5 19.6 259 194-473 4-275 (283)
162 2r5t_A Serine/threonine-protei 100.0 9E-42 3.1E-46 341.9 16.6 249 195-467 38-291 (373)
163 4fl3_A Tyrosine-protein kinase 100.0 7.9E-42 2.7E-46 365.0 17.0 249 201-472 375-631 (635)
164 3gbz_A Kinase, CMGC CDK; ssgci 100.0 2.6E-42 8.8E-47 341.2 12.0 259 196-465 35-318 (329)
165 2yfx_A Tyrosine-protein kinase 100.0 5.5E-42 1.9E-46 338.6 14.3 266 191-475 26-307 (327)
166 2clq_A Mitogen-activated prote 100.0 2.2E-41 7.7E-46 329.1 18.4 247 201-465 28-278 (295)
167 3oz6_A Mitogen-activated prote 100.0 1.4E-41 4.7E-46 343.9 17.5 263 193-466 7-329 (388)
168 2rku_A Serine/threonine-protei 100.0 2.5E-41 8.4E-46 328.8 18.7 247 196-466 16-266 (294)
169 1nxk_A MAP kinase-activated pr 100.0 3.8E-41 1.3E-45 341.3 20.8 245 201-466 68-322 (400)
170 4aaa_A Cyclin-dependent kinase 100.0 3.1E-42 1.1E-46 341.0 12.4 261 196-465 26-306 (331)
171 3ttj_A Mitogen-activated prote 100.0 1.8E-41 6.3E-46 349.8 18.5 257 196-466 63-356 (464)
172 4ejn_A RAC-alpha serine/threon 100.0 6E-42 2.1E-46 352.7 14.9 248 195-465 148-404 (446)
173 1vzo_A Ribosomal protein S6 ki 100.0 4.1E-42 1.4E-46 343.2 13.2 253 195-466 54-322 (355)
174 3i6u_A CDS1, serine/threonine- 100.0 3.2E-41 1.1E-45 344.1 19.9 254 191-465 131-399 (419)
175 2acx_A G protein-coupled recep 100.0 1.4E-41 4.8E-46 355.1 17.5 250 197-465 186-444 (576)
176 3a7i_A MST3 kinase, serine/thr 100.0 4.7E-41 1.6E-45 328.2 19.8 247 196-466 23-271 (303)
177 3sv0_A Casein kinase I-like; t 100.0 9.3E-41 3.2E-45 344.8 22.9 262 196-474 8-280 (483)
178 2owb_A Serine/threonine-protei 100.0 2.6E-41 8.8E-46 334.9 17.8 246 196-465 42-291 (335)
179 3lm5_A Serine/threonine-protei 100.0 1.2E-41 4.1E-46 336.2 15.2 260 187-465 20-287 (327)
180 3mtl_A Cell division protein k 100.0 3.5E-42 1.2E-46 339.6 11.1 259 197-465 4-281 (324)
181 2w5a_A Serine/threonine-protei 100.0 1.2E-41 4.2E-46 328.2 14.6 253 196-468 7-270 (279)
182 2j7t_A Serine/threonine-protei 100.0 1.4E-41 4.9E-46 331.7 15.2 250 196-465 20-275 (302)
183 3e7e_A HBUB1, BUB1A, mitotic c 100.0 4.8E-41 1.6E-45 337.1 19.3 253 195-474 65-341 (365)
184 2vgo_A Serine/threonine-protei 100.0 1.5E-41 5.1E-46 328.6 15.0 244 196-465 15-262 (284)
185 3com_A Serine/threonine-protei 100.0 8.4E-41 2.9E-45 328.2 20.3 251 193-465 27-278 (314)
186 1u46_A ACK-1, activated CDC42 100.0 1.9E-41 6.4E-46 329.0 15.5 258 195-473 18-285 (291)
187 3mwu_A Calmodulin-domain prote 100.0 8E-41 2.7E-45 348.2 20.9 251 194-466 21-277 (486)
188 3mi9_A Cell division protein k 100.0 1.9E-41 6.6E-46 338.1 15.4 261 196-465 18-311 (351)
189 3rp9_A Mitogen-activated prote 100.0 3.9E-41 1.3E-45 348.0 18.1 191 196-393 54-279 (458)
190 1x8b_A WEE1HU, WEE1-like prote 100.0 1.6E-41 5.6E-46 328.6 14.3 245 194-465 10-279 (289)
191 3c4z_A Rhodopsin kinase; Ser/T 100.0 8E-41 2.7E-45 348.5 20.3 251 198-465 188-448 (543)
192 3lij_A Calcium/calmodulin depe 100.0 1.2E-40 4.1E-45 347.4 21.6 257 193-471 35-299 (494)
193 1ua2_A CAK, cell division prot 100.0 3.8E-41 1.3E-45 335.3 17.0 262 195-466 10-292 (346)
194 3nyv_A Calmodulin-domain prote 100.0 5.3E-41 1.8E-45 349.5 18.7 252 192-465 23-281 (484)
195 1cm8_A Phosphorylated MAP kina 100.0 1.7E-41 5.8E-46 340.1 13.8 254 196-465 26-307 (367)
196 2h6d_A 5'-AMP-activated protei 100.0 8.8E-41 3E-45 321.7 18.3 246 196-466 12-262 (276)
197 3byv_A Rhoptry kinase; malaria 100.0 1.9E-42 6.4E-47 348.8 6.5 247 196-472 74-368 (377)
198 2y7j_A Phosphorylase B kinase 100.0 1.3E-40 4.5E-45 333.5 19.9 250 195-465 94-359 (365)
199 3fme_A Dual specificity mitoge 100.0 3.2E-41 1.1E-45 327.2 14.7 251 195-465 7-266 (290)
200 3n9x_A Phosphotransferase; mal 100.0 8.4E-41 2.9E-45 342.5 18.4 197 196-399 27-253 (432)
201 3nsz_A CK II alpha, casein kin 100.0 1.3E-40 4.5E-45 329.1 19.1 256 195-465 36-319 (330)
202 2ycf_A Serine/threonine-protei 100.0 6.6E-41 2.3E-45 330.2 16.7 254 191-465 6-274 (322)
203 1wak_A Serine/threonine-protei 100.0 5.9E-41 2E-45 340.1 16.7 269 187-465 29-391 (397)
204 3q5i_A Protein kinase; CDPK, m 100.0 1.8E-40 6.1E-45 347.0 20.8 249 195-465 36-301 (504)
205 2vwi_A Serine/threonine-protei 100.0 1.3E-41 4.4E-46 332.0 11.4 257 195-465 15-287 (303)
206 2j0j_A Focal adhesion kinase 1 100.0 7.2E-41 2.5E-45 358.9 18.0 261 192-474 387-653 (656)
207 2wtk_C Serine/threonine-protei 100.0 5.1E-40 1.7E-44 321.1 21.7 249 196-466 6-264 (305)
208 2r3i_A Cell division protein k 100.0 2.1E-40 7.2E-45 322.9 18.7 258 197-465 5-283 (299)
209 3an0_A Dual specificity mitoge 100.0 1.5E-40 5E-45 330.2 16.9 250 196-465 52-310 (340)
210 4e7w_A Glycogen synthase kinas 100.0 3.7E-41 1.3E-45 341.0 12.7 259 196-466 41-322 (394)
211 3qyz_A Mitogen-activated prote 100.0 1.2E-40 4E-45 334.1 16.2 259 196-465 28-313 (364)
212 3eb0_A Putative uncharacterize 100.0 7.5E-41 2.6E-45 337.8 14.8 263 196-471 8-329 (383)
213 2xrw_A Mitogen-activated prote 100.0 3E-40 1E-44 331.9 19.1 260 196-466 26-319 (371)
214 3q60_A ROP5B; pseudokinase, tr 100.0 2.3E-41 7.9E-46 340.1 10.9 251 197-465 64-352 (371)
215 3pfq_A PKC-B, PKC-beta, protei 100.0 1.9E-40 6.6E-45 356.7 18.6 247 195-465 341-597 (674)
216 3rgf_A Cyclin-dependent kinase 100.0 2.8E-40 9.6E-45 336.1 18.6 263 197-465 22-333 (405)
217 1phk_A Phosphorylase kinase; g 100.0 4E-40 1.4E-44 320.8 18.6 249 196-465 18-283 (298)
218 2fst_X Mitogen-activated prote 100.0 1.1E-40 3.7E-45 334.1 14.9 255 196-466 30-312 (367)
219 2pml_X PFPK7, Ser/Thr protein 100.0 2.4E-40 8.3E-45 329.7 17.3 257 196-465 32-322 (348)
220 2x7f_A TRAF2 and NCK-interacti 100.0 2.1E-40 7.2E-45 327.1 16.4 249 196-465 25-286 (326)
221 2y4i_B KSR2, HKSR2, kinase sup 100.0 8.5E-41 2.9E-45 328.8 13.4 257 195-474 33-304 (319)
222 3kvw_A DYRK2, dual specificity 100.0 3.4E-40 1.2E-44 337.4 18.1 198 195-402 97-303 (429)
223 3pg1_A Mitogen-activated prote 100.0 1.4E-40 4.7E-45 333.4 14.9 259 196-465 23-316 (362)
224 1zy4_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44 320.2 18.3 250 195-465 6-283 (303)
225 1z57_A Dual specificity protei 100.0 8.9E-41 3.1E-45 331.2 12.9 259 194-465 13-328 (339)
226 1j1b_A Glycogen synthase kinas 100.0 1.9E-40 6.5E-45 338.5 15.2 258 196-465 55-336 (420)
227 2wei_A Calmodulin-domain prote 100.0 9.8E-40 3.3E-44 316.4 19.3 253 191-465 18-276 (287)
228 3cek_A Dual specificity protei 100.0 6.5E-40 2.2E-44 321.7 18.0 250 195-466 28-293 (313)
229 2i6l_A Mitogen-activated prote 100.0 8.2E-40 2.8E-44 321.7 18.4 256 196-465 12-305 (320)
230 1q8y_A SR protein kinase; tran 100.0 8.3E-40 2.8E-44 329.0 18.3 270 194-473 18-343 (373)
231 4exu_A Mitogen-activated prote 100.0 1.1E-39 3.8E-44 327.7 19.0 254 196-466 43-324 (371)
232 1blx_A Cyclin-dependent kinase 100.0 3.4E-40 1.2E-44 325.5 14.9 260 196-465 12-296 (326)
233 3e3p_A Protein kinase, putativ 100.0 9.2E-41 3.1E-45 334.4 10.8 262 194-465 22-314 (360)
234 2vx3_A Dual specificity tyrosi 100.0 1.4E-39 4.6E-44 328.5 18.8 200 195-402 54-262 (382)
235 3coi_A Mitogen-activated prote 100.0 5.7E-40 1.9E-44 327.7 14.9 253 196-465 25-305 (353)
236 2b9h_A MAP kinase FUS3, mitoge 100.0 5.7E-40 1.9E-44 327.7 14.2 259 196-465 12-305 (353)
237 3aln_A Dual specificity mitoge 100.0 9.5E-40 3.3E-44 322.6 15.6 253 196-465 23-285 (327)
238 2eu9_A Dual specificity protei 100.0 5.4E-40 1.9E-44 327.8 13.2 262 191-465 15-333 (355)
239 3qa8_A MGC80376 protein; kinas 100.0 5.5E-40 1.9E-44 346.4 13.3 270 195-474 14-311 (676)
240 3fhr_A MAP kinase-activated pr 100.0 2.9E-39 9.9E-44 320.2 17.4 250 196-465 29-287 (336)
241 2rio_A Serine/threonine-protei 100.0 2.5E-39 8.6E-44 331.6 16.9 247 200-465 20-295 (434)
242 2iwi_A Serine/threonine-protei 100.0 1.2E-39 4.1E-44 319.7 12.0 243 191-465 27-283 (312)
243 3a99_A Proto-oncogene serine/t 100.0 1.1E-39 3.6E-44 321.2 11.3 239 195-465 43-293 (320)
244 2dyl_A Dual specificity mitoge 100.0 1.1E-38 3.7E-43 313.5 18.4 249 196-465 26-283 (318)
245 3p23_A Serine/threonine-protei 100.0 1.4E-38 4.9E-43 325.2 16.8 246 197-465 26-283 (432)
246 3uqc_A Probable conserved tran 100.0 8.6E-38 2.9E-42 302.2 18.4 235 194-475 30-268 (286)
247 2pzi_A Probable serine/threoni 100.0 2E-38 7E-43 342.9 15.3 240 194-471 79-327 (681)
248 2vuw_A Serine/threonine-protei 100.0 6.1E-38 2.1E-42 310.8 9.4 243 192-464 17-329 (336)
249 3m2w_A MAP kinase-activated pr 100.0 8.9E-37 3E-41 297.4 17.2 220 201-465 24-256 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 2.9E-37 9.8E-42 314.3 12.4 237 199-465 82-363 (413)
251 4azs_A Methyltransferase WBDD; 100.0 2.1E-31 7.1E-36 280.5 4.9 186 201-397 240-437 (569)
252 3en9_A Glycoprotease, O-sialog 99.9 1.4E-27 4.7E-32 250.0 6.8 183 200-399 341-539 (540)
253 1zar_A RIO2 kinase; serine kin 99.9 1.8E-24 6.3E-29 207.7 7.0 141 199-371 94-252 (282)
254 1zth_A RIO1 serine protein kin 99.8 3.6E-20 1.2E-24 175.6 10.0 135 198-347 50-219 (258)
255 4gyi_A RIO2 kinase; protein ki 99.7 1.1E-17 3.7E-22 164.8 6.7 138 197-348 97-266 (397)
256 3rgz_A Protein brassinosteroid 99.6 7.1E-16 2.4E-20 168.9 7.4 108 1-108 634-743 (768)
257 2wfh_A SLIT homolog 2 protein 99.5 1.8E-14 6.1E-19 129.9 9.6 106 1-108 33-142 (193)
258 1w8a_A SLIT protein; signaling 99.5 3E-14 1E-18 128.4 9.6 107 1-107 31-141 (192)
259 2v70_A SLIT-2, SLIT homolog 2 99.5 3.6E-14 1.2E-18 130.8 9.3 107 1-107 59-168 (220)
260 2v9t_B SLIT homolog 2 protein 99.5 4.9E-14 1.7E-18 129.9 9.6 107 1-108 58-168 (220)
261 3e6j_A Variable lymphocyte rec 99.4 2.3E-13 7.8E-18 126.2 9.8 87 1-88 42-129 (229)
262 2o6r_A Variable lymphocyte rec 99.4 3.8E-13 1.3E-17 119.4 10.2 106 1-107 30-139 (177)
263 3g39_A Variable lymphocyte rec 99.4 3.6E-13 1.2E-17 118.7 9.9 102 2-107 12-117 (170)
264 1ogq_A PGIP-2, polygalacturona 99.4 9.3E-14 3.2E-18 135.4 5.3 108 1-108 199-307 (313)
265 2r9u_A Variable lymphocyte rec 99.4 6.3E-13 2.2E-17 117.6 9.7 102 2-107 15-120 (174)
266 1p9a_G Platelet glycoprotein I 99.4 5.7E-13 2E-17 128.2 10.1 105 1-107 102-210 (290)
267 2r9u_A Variable lymphocyte rec 99.4 6.7E-13 2.3E-17 117.4 8.7 89 1-90 35-124 (174)
268 3g39_A Variable lymphocyte rec 99.4 7.4E-13 2.5E-17 116.7 8.7 87 1-88 32-119 (170)
269 1w8a_A SLIT protein; signaling 99.4 4.8E-13 1.6E-17 120.4 7.6 87 1-87 56-143 (192)
270 3m19_A Variable lymphocyte rec 99.4 1.3E-12 4.5E-17 122.9 10.3 105 2-107 86-194 (251)
271 3oja_A Leucine-rich immune mol 99.4 1.1E-13 3.7E-18 143.3 2.8 29 235-263 323-351 (487)
272 3e6j_A Variable lymphocyte rec 99.4 1.8E-12 6.2E-17 120.1 9.9 106 1-108 66-175 (229)
273 2o6s_A Variable lymphocyte rec 99.4 2.3E-12 7.9E-17 117.5 10.3 83 1-83 30-113 (208)
274 2ifg_A High affinity nerve gro 99.3 1.6E-12 5.6E-17 128.4 8.4 102 3-107 12-118 (347)
275 3rfs_A Internalin B, repeat mo 99.3 3.7E-12 1.3E-16 121.4 10.3 105 2-107 112-220 (272)
276 2o6q_A Variable lymphocyte rec 99.3 4E-12 1.4E-16 120.9 10.2 106 1-107 111-220 (270)
277 3tm0_A Aminoglycoside 3'-phosp 99.3 3.9E-12 1.3E-16 120.5 9.9 140 197-345 16-212 (263)
278 1ogq_A PGIP-2, polygalacturona 99.3 7.9E-13 2.7E-17 128.7 4.4 103 1-103 52-160 (313)
279 2v9t_B SLIT homolog 2 protein 99.3 4.5E-12 1.5E-16 116.7 9.1 103 1-104 34-140 (220)
280 4g8a_A TOLL-like receptor 4; l 99.3 3E-12 1E-16 136.9 8.4 108 1-108 471-583 (635)
281 3rgz_A Protein brassinosteroid 99.3 3.1E-12 1.1E-16 140.1 7.1 102 2-103 611-715 (768)
282 2je0_A Acidic leucine-rich nuc 99.3 2.8E-12 9.7E-17 110.2 5.0 101 1-103 19-124 (149)
283 3m19_A Variable lymphocyte rec 99.3 1.3E-11 4.3E-16 116.1 9.9 88 1-89 37-125 (251)
284 3v47_A TOLL-like receptor 5B a 99.3 7.9E-12 2.7E-16 128.2 8.9 106 1-107 301-410 (455)
285 2ell_A Acidic leucine-rich nuc 99.3 4E-12 1.4E-16 111.7 5.6 101 1-103 26-131 (168)
286 2v70_A SLIT-2, SLIT homolog 2 99.3 7E-12 2.4E-16 115.4 7.5 87 1-87 83-170 (220)
287 2xot_A Amphoterin-induced prot 99.3 3.7E-12 1.3E-16 126.6 5.9 89 1-90 66-155 (361)
288 4fcg_A Uncharacterized protein 99.2 5.3E-12 1.8E-16 123.7 6.9 102 1-103 185-288 (328)
289 1ozn_A Reticulon 4 receptor; N 99.2 8.4E-12 2.9E-16 119.7 7.8 105 2-107 132-240 (285)
290 2o6s_A Variable lymphocyte rec 99.2 2.1E-11 7E-16 111.1 10.0 106 1-107 54-163 (208)
291 4fcg_A Uncharacterized protein 99.2 7.7E-12 2.6E-16 122.5 7.5 91 1-92 208-299 (328)
292 3zyj_A Leucine-rich repeat-con 99.2 1.2E-11 4.1E-16 126.4 9.1 105 1-108 187-295 (440)
293 2xot_A Amphoterin-induced prot 99.2 1.4E-11 4.7E-16 122.5 9.1 103 1-103 41-147 (361)
294 2z66_A Variable lymphocyte rec 99.2 9.9E-12 3.4E-16 120.5 7.8 107 1-107 152-263 (306)
295 2wfh_A SLIT homolog 2 protein 99.2 1.2E-11 4.2E-16 111.2 7.7 84 1-84 56-140 (193)
296 1p9a_G Platelet glycoprotein I 99.2 2.2E-11 7.6E-16 117.0 9.9 102 1-104 79-184 (290)
297 2o6r_A Variable lymphocyte rec 99.2 1.4E-11 4.6E-16 109.3 7.3 87 1-87 54-141 (177)
298 1nd4_A Aminoglycoside 3'-phosp 99.2 2.8E-11 9.5E-16 114.3 9.7 131 202-346 26-214 (264)
299 3zyi_A Leucine-rich repeat-con 99.2 2.1E-11 7.2E-16 125.0 8.7 105 1-108 198-306 (452)
300 3rfs_A Internalin B, repeat mo 99.2 4.6E-11 1.6E-15 113.7 10.0 83 1-83 87-170 (272)
301 3vq2_A TLR4, TOLL-like recepto 99.2 1.2E-11 4.1E-16 131.8 6.6 107 1-108 450-561 (606)
302 4g8a_A TOLL-like receptor 4; l 99.2 2.3E-11 8E-16 130.0 8.0 102 1-103 54-159 (635)
303 1xku_A Decorin; proteoglycan, 99.2 4.2E-11 1.4E-15 117.4 9.2 104 1-106 194-307 (330)
304 4eco_A Uncharacterized protein 99.2 4.7E-11 1.6E-15 127.8 9.7 105 1-107 490-602 (636)
305 1dce_A Protein (RAB geranylger 99.1 4E-11 1.4E-15 125.9 7.9 100 1-104 443-545 (567)
306 4b8c_D Glucose-repressible alc 99.1 3.4E-11 1.2E-15 130.4 7.5 100 1-104 226-328 (727)
307 2ft3_A Biglycan; proteoglycan, 99.1 5.7E-11 1.9E-15 116.5 8.2 104 1-106 195-308 (332)
308 1dce_A Protein (RAB geranylger 99.1 3.6E-11 1.2E-15 126.3 6.8 86 1-89 465-551 (567)
309 4ezg_A Putative uncharacterize 99.1 3.2E-11 1.1E-15 108.9 5.5 84 1-87 68-153 (197)
310 1ozn_A Reticulon 4 receptor; N 99.1 1.1E-10 3.6E-15 112.0 9.4 102 1-103 82-188 (285)
311 4eco_A Uncharacterized protein 99.1 2.7E-11 9.3E-16 129.6 5.6 102 1-103 83-284 (636)
312 3o6n_A APL1; leucine-rich repe 99.1 2.7E-11 9.1E-16 121.7 5.1 103 2-106 251-353 (390)
313 4b8c_D Glucose-repressible alc 99.1 2.7E-11 9.3E-16 131.2 5.3 89 1-91 249-337 (727)
314 2o6q_A Variable lymphocyte rec 99.1 1.6E-10 5.4E-15 109.9 10.0 88 1-89 63-151 (270)
315 3oja_B Anopheles plasmodium-re 99.1 2.6E-11 8.9E-16 128.9 5.0 104 2-107 257-360 (597)
316 2ifg_A High affinity nerve gro 99.1 5.3E-11 1.8E-15 117.5 6.8 84 1-87 33-119 (347)
317 1a9n_A U2A', U2A'; complex (nu 99.1 3.4E-11 1.1E-15 106.6 4.6 100 1-105 21-126 (176)
318 4ecn_A Leucine-rich repeat pro 99.1 1.1E-10 3.9E-15 127.8 9.7 104 1-106 730-841 (876)
319 2ell_A Acidic leucine-rich nuc 99.1 3.7E-11 1.2E-15 105.5 4.7 84 1-88 51-137 (168)
320 2id5_A Lingo-1, leucine rich r 99.1 5.7E-11 1.9E-15 122.7 6.8 106 1-108 226-336 (477)
321 1a9n_A U2A', U2A'; complex (nu 99.1 6E-11 2.1E-15 105.0 5.7 84 1-88 44-130 (176)
322 2z62_A TOLL-like receptor 4, v 99.1 1.7E-10 5.8E-15 109.9 9.1 102 1-103 30-135 (276)
323 4ecn_A Leucine-rich repeat pro 99.1 3.7E-11 1.3E-15 131.7 5.0 103 1-103 325-526 (876)
324 2je0_A Acidic leucine-rich nuc 99.1 3.3E-11 1.1E-15 103.5 3.6 85 1-88 44-130 (149)
325 2z63_A TOLL-like receptor 4, v 99.1 1.1E-10 3.7E-15 123.3 8.3 107 1-107 423-533 (570)
326 2z62_A TOLL-like receptor 4, v 99.1 2.2E-10 7.5E-15 109.2 9.2 103 1-103 54-160 (276)
327 3v47_A TOLL-like receptor 5B a 99.1 1.2E-10 4E-15 119.4 7.6 104 1-104 277-383 (455)
328 3j0a_A TOLL-like receptor 5; m 99.1 5.6E-11 1.9E-15 131.5 5.5 104 1-107 453-562 (844)
329 3oja_B Anopheles plasmodium-re 99.1 2.2E-10 7.6E-15 121.7 9.8 102 1-103 77-182 (597)
330 3zyi_A Leucine-rich repeat-con 99.1 1.7E-10 5.8E-15 118.2 8.5 102 1-103 77-182 (452)
331 3dxp_A Putative acyl-COA dehyd 99.1 3.7E-10 1.3E-14 112.0 10.6 141 201-347 44-249 (359)
332 1wwl_A Monocyte differentiatio 99.1 5.1E-11 1.7E-15 115.9 3.9 85 1-85 97-188 (312)
333 3vq2_A TLR4, TOLL-like recepto 99.1 2.7E-10 9.2E-15 121.3 9.8 82 2-83 35-117 (606)
334 3t6q_A CD180 antigen; protein- 99.1 1.2E-10 4.3E-15 123.9 6.8 87 1-87 427-517 (606)
335 3a79_B TLR6, VLRB.59, TOLL-lik 99.1 2.7E-10 9.1E-15 120.2 9.2 102 2-107 406-512 (562)
336 2z66_A Variable lymphocyte rec 99.1 2.3E-10 7.9E-15 110.8 7.9 83 1-83 103-188 (306)
337 3o6n_A APL1; leucine-rich repe 99.0 4.8E-10 1.6E-14 112.5 9.9 103 1-104 71-177 (390)
338 2id5_A Lingo-1, leucine rich r 99.0 3.5E-10 1.2E-14 116.7 9.0 103 1-103 34-139 (477)
339 3o53_A Protein LRIM1, AGAP0063 99.0 1.1E-10 3.6E-15 113.9 4.4 103 2-107 147-252 (317)
340 3t6q_A CD180 antigen; protein- 99.0 3.7E-10 1.3E-14 120.2 8.5 103 1-103 35-140 (606)
341 2z81_A CD282 antigen, TOLL-lik 99.0 1.8E-10 6.2E-15 121.1 5.8 103 1-103 28-134 (549)
342 1ziw_A TOLL-like receptor 3; i 99.0 4.9E-10 1.7E-14 121.0 9.2 89 19-108 532-625 (680)
343 3a79_B TLR6, VLRB.59, TOLL-lik 99.0 4E-10 1.4E-14 118.8 8.1 80 1-83 54-134 (562)
344 2xwt_C Thyrotropin receptor; s 99.0 2.5E-10 8.7E-15 106.3 5.8 101 1-103 33-141 (239)
345 2z7x_B TOLL-like receptor 1, v 99.0 2.3E-10 7.9E-15 119.4 5.8 103 1-103 326-432 (520)
346 3zyj_A Leucine-rich repeat-con 99.0 5E-10 1.7E-14 114.3 8.0 102 1-103 66-171 (440)
347 2z7x_B TOLL-like receptor 1, v 99.0 2E-10 7E-15 119.8 5.1 81 1-84 23-104 (520)
348 4ezg_A Putative uncharacterize 99.0 3.4E-10 1.2E-14 102.1 5.7 100 1-103 46-147 (197)
349 2ft3_A Biglycan; proteoglycan, 99.0 8.1E-10 2.8E-14 108.3 8.5 97 2-102 36-133 (332)
350 2z80_A TOLL-like receptor 2, v 99.0 3.1E-10 1.1E-14 112.3 5.6 100 1-102 54-159 (353)
351 3oja_A Leucine-rich immune mol 99.0 3.7E-10 1.3E-14 116.7 5.4 59 1-60 36-94 (487)
352 1wwl_A Monocyte differentiatio 99.0 2.5E-10 8.5E-15 110.9 3.7 86 1-86 151-244 (312)
353 4glp_A Monocyte differentiatio 99.0 5.2E-10 1.8E-14 108.5 6.0 102 1-103 171-283 (310)
354 3j0a_A TOLL-like receptor 5; m 98.9 8.1E-10 2.8E-14 122.2 8.1 89 1-89 26-116 (844)
355 1ziw_A TOLL-like receptor 3; i 98.9 9.9E-10 3.4E-14 118.6 8.6 83 2-84 52-135 (680)
356 2z63_A TOLL-like receptor 4, v 98.9 1.3E-09 4.6E-14 114.9 9.1 87 1-88 30-117 (570)
357 3sg8_A APH(2'')-ID; antibiotic 98.9 1.6E-10 5.4E-15 111.9 1.6 183 201-399 26-288 (304)
358 2z81_A CD282 antigen, TOLL-lik 98.9 7.7E-10 2.6E-14 116.2 6.8 103 1-103 52-159 (549)
359 1xku_A Decorin; proteoglycan, 98.9 2.2E-09 7.6E-14 105.0 9.6 99 1-103 33-132 (330)
360 2z80_A TOLL-like receptor 2, v 98.9 1E-09 3.4E-14 108.6 6.8 101 1-103 78-185 (353)
361 4glp_A Monocyte differentiatio 98.9 1.3E-09 4.3E-14 105.8 6.6 103 1-103 93-208 (310)
362 2xwt_C Thyrotropin receptor; s 98.9 1.3E-09 4.5E-14 101.4 6.5 99 1-103 107-216 (239)
363 3o53_A Protein LRIM1, AGAP0063 98.8 1.1E-09 3.9E-14 106.5 3.6 96 1-103 36-131 (317)
364 1h6u_A Internalin H; cell adhe 98.8 4.1E-09 1.4E-13 102.1 7.5 82 1-88 87-168 (308)
365 1xeu_A Internalin C; cellular 98.8 5.8E-09 2E-13 98.5 8.2 77 1-83 43-119 (263)
366 1h6u_A Internalin H; cell adhe 98.8 1.9E-09 6.6E-14 104.4 5.0 97 1-103 109-206 (308)
367 1xeu_A Internalin C; cellular 98.8 5.5E-09 1.9E-13 98.7 7.9 97 1-104 65-162 (263)
368 4fmz_A Internalin; leucine ric 98.8 2.2E-09 7.4E-14 105.8 5.2 100 1-105 223-324 (347)
369 1h6t_A Internalin B; cell adhe 98.8 4.4E-09 1.5E-13 101.0 7.0 78 1-83 70-147 (291)
370 1h6t_A Internalin B; cell adhe 98.8 3.5E-09 1.2E-13 101.7 5.9 97 1-103 92-189 (291)
371 3cvr_A Invasion plasmid antige 98.8 8.7E-09 3E-13 107.8 9.0 75 2-88 123-197 (571)
372 1ds9_A Outer arm dynein; leuci 98.8 1E-10 3.6E-15 105.6 -5.3 99 1-103 20-126 (198)
373 3cvr_A Invasion plasmid antige 98.8 1.1E-08 3.6E-13 107.1 9.0 94 1-106 142-244 (571)
374 1m9s_A Internalin B; cell inva 98.8 7.5E-09 2.5E-13 109.4 7.8 78 1-83 67-144 (605)
375 1ds9_A Outer arm dynein; leuci 98.8 4.3E-10 1.5E-14 101.5 -1.7 99 1-105 50-153 (198)
376 1m9s_A Internalin B; cell inva 98.8 6.4E-09 2.2E-13 109.9 6.7 98 1-103 89-186 (605)
377 4ay9_X Follicle-stimulating ho 98.7 8.6E-09 2.9E-13 101.7 6.6 88 1-89 32-122 (350)
378 1o6v_A Internalin A; bacterial 98.7 8.5E-09 2.9E-13 106.0 6.0 78 1-83 267-344 (466)
379 3bz5_A Internalin-J, INLJ; leu 98.7 2.9E-08 9.9E-13 101.6 9.1 95 1-103 44-138 (457)
380 1o6v_A Internalin A; bacterial 98.7 1.6E-08 5.5E-13 103.9 6.8 96 2-102 246-341 (466)
381 3r70_A Aminoglycoside phosphot 98.7 7.4E-08 2.5E-12 93.7 10.7 133 200-347 42-238 (320)
382 3bz5_A Internalin-J, INLJ; leu 98.7 3.5E-08 1.2E-12 101.0 8.2 81 1-90 172-252 (457)
383 1jl5_A Outer protein YOPM; leu 98.6 2.1E-08 7.2E-13 102.5 6.2 61 23-90 317-379 (454)
384 4gkh_A Aminoglycoside 3'-phosp 98.6 2.3E-07 8E-12 87.7 12.3 135 202-346 31-223 (272)
385 4fmz_A Internalin; leucine ric 98.6 1.4E-08 4.7E-13 100.0 3.7 100 1-103 245-344 (347)
386 1jl5_A Outer protein YOPM; leu 98.6 7.7E-08 2.6E-12 98.3 9.4 80 1-88 133-212 (454)
387 3g06_A SSPH2 (leucine-rich rep 98.6 1.9E-08 6.5E-13 106.5 4.5 75 23-105 221-297 (622)
388 3d1u_A Putative fructosamine-3 98.6 2E-07 6.9E-12 89.0 10.4 139 201-345 21-215 (288)
389 2ca6_A RAN GTPase-activating p 98.6 3.6E-09 1.2E-13 105.9 -2.5 104 1-104 161-286 (386)
390 3tdw_A Gentamicin resistance p 98.5 4.2E-07 1.4E-11 87.7 11.8 135 201-346 25-224 (306)
391 3g06_A SSPH2 (leucine-rich rep 98.5 1.4E-07 4.8E-12 99.8 9.0 90 1-102 42-131 (622)
392 3goz_A Leucine-rich repeat-con 98.5 1E-08 3.4E-13 101.7 -0.4 83 1-83 24-122 (362)
393 2ca6_A RAN GTPase-activating p 98.5 5.1E-09 1.7E-13 104.9 -2.6 104 1-104 124-256 (386)
394 3rw6_A Nuclear RNA export fact 98.4 4.8E-08 1.6E-12 91.5 2.3 82 4-88 148-238 (267)
395 3rw6_A Nuclear RNA export fact 98.4 5.2E-08 1.8E-12 91.2 0.6 62 1-63 172-237 (267)
396 3ats_A Putative uncharacterize 98.4 8.7E-07 3E-11 87.4 9.1 80 201-280 26-122 (357)
397 2ast_B S-phase kinase-associat 98.4 1.9E-08 6.5E-13 98.4 -2.9 104 1-105 72-181 (336)
398 2ast_B S-phase kinase-associat 98.4 5.4E-08 1.8E-12 95.2 0.3 102 1-105 49-155 (336)
399 3ovc_A Hygromycin-B 4-O-kinase 98.4 1.2E-06 4E-11 86.6 9.9 73 201-279 47-122 (362)
400 4ay9_X Follicle-stimulating ho 98.3 5.1E-07 1.7E-11 88.9 5.7 100 2-103 131-234 (350)
401 3goz_A Leucine-rich repeat-con 98.3 5.7E-08 1.9E-12 96.3 -1.4 101 3-103 2-120 (362)
402 2q83_A YTAA protein; 2635576, 98.2 8.1E-06 2.8E-10 79.8 11.4 140 201-345 38-251 (346)
403 2olc_A MTR kinase, methylthior 98.2 6.5E-06 2.2E-10 82.4 10.2 74 201-276 36-120 (397)
404 3sb4_A Hypothetical leucine ri 98.1 2.7E-06 9.3E-11 82.9 6.9 89 1-92 228-318 (329)
405 1z7x_W Ribonuclease inhibitor; 98.1 1.4E-07 4.9E-12 96.4 -4.0 103 1-103 286-409 (461)
406 1z7x_W Ribonuclease inhibitor; 98.0 7.9E-08 2.7E-12 98.4 -6.6 84 1-84 229-327 (461)
407 3jr1_A Putative fructosamine-3 98.0 3.7E-05 1.3E-09 73.9 11.6 137 201-342 42-232 (312)
408 3f7w_A Putative fructosamine-3 98.0 3E-05 1E-09 73.8 10.1 74 201-278 21-97 (288)
409 3un9_A NLR family member X1; l 97.9 4.6E-07 1.6E-11 89.9 -3.0 104 1-104 128-251 (372)
410 2pyw_A Uncharacterized protein 97.7 0.00013 4.5E-09 73.5 11.0 78 316-394 232-312 (420)
411 3un9_A NLR family member X1; l 97.7 1.6E-06 5.6E-11 85.9 -3.0 103 1-103 103-222 (372)
412 1io0_A Tropomodulin; LRR prote 97.6 4.1E-06 1.4E-10 74.2 -1.5 84 1-84 38-137 (185)
413 3ogk_B Coronatine-insensitive 97.5 5.7E-06 1.9E-10 87.4 -3.0 84 1-84 405-502 (592)
414 1io0_A Tropomodulin; LRR prote 97.5 4.2E-06 1.4E-10 74.2 -3.5 83 1-83 67-164 (185)
415 3csv_A Aminoglycoside phosphot 97.5 0.00062 2.1E-08 66.0 11.3 142 201-347 24-218 (333)
416 1zyl_A Hypothetical protein YI 97.4 0.0014 4.7E-08 63.4 13.4 141 202-346 33-223 (328)
417 3dxq_A Choline/ethanolamine ki 97.4 0.0003 1E-08 67.3 7.8 70 201-278 24-95 (301)
418 3rfe_A Platelet glycoprotein I 97.4 0.00023 7.7E-09 58.8 5.8 54 27-83 12-68 (130)
419 1nw1_A Choline kinase (49.2 KD 97.4 0.00045 1.5E-08 69.6 9.0 72 201-278 79-159 (429)
420 2ppq_A HSK, HK, homoserine kin 97.4 0.0015 5.2E-08 62.8 12.5 143 201-346 28-217 (322)
421 3i1a_A Spectinomycin phosphotr 97.2 0.0026 8.9E-08 61.9 12.6 68 204-278 32-108 (339)
422 3feg_A Choline/ethanolamine ki 97.2 0.00082 2.8E-08 66.3 9.0 141 201-346 56-254 (379)
423 3sb4_A Hypothetical leucine ri 97.2 0.00043 1.5E-08 67.1 6.2 75 1-77 252-328 (329)
424 2yle_A Protein spire homolog 1 97.2 0.0031 1.1E-07 56.1 10.9 103 276-397 33-135 (229)
425 2qg7_A Ethanolamine kinase PV0 97.1 0.0021 7.3E-08 65.1 11.0 73 201-278 114-188 (458)
426 2p1m_B Transport inhibitor res 97.1 2.7E-05 9.4E-10 82.1 -3.5 102 1-104 399-518 (594)
427 3e4g_A ATP synthase subunit S, 97.1 3.9E-05 1.3E-09 66.5 -2.3 57 24-80 62-124 (176)
428 3ogk_B Coronatine-insensitive 96.9 0.00024 8.1E-09 74.8 2.0 78 1-79 166-252 (592)
429 3c5i_A Choline kinase; choline 96.9 0.0013 4.5E-08 64.7 7.2 73 201-278 39-121 (369)
430 2p1m_B Transport inhibitor res 96.8 8.5E-05 2.9E-09 78.3 -2.5 64 21-84 103-170 (594)
431 3f2s_A CK, chetk-alpha, cholin 96.7 0.0041 1.4E-07 61.5 9.0 142 201-346 58-280 (401)
432 2ra8_A Uncharacterized protein 96.7 0.00019 6.5E-09 70.5 -1.1 85 1-85 195-294 (362)
433 3rfe_A Platelet glycoprotein I 96.6 0.002 6.7E-08 53.0 4.9 55 50-107 12-70 (130)
434 4fdw_A Leucine rich hypothetic 96.6 0.003 1E-07 63.0 6.9 97 1-102 250-355 (401)
435 4fdw_A Leucine rich hypothetic 96.3 0.0042 1.4E-07 61.8 5.9 87 1-92 228-320 (401)
436 2ra8_A Uncharacterized protein 96.0 0.0006 2E-08 66.9 -2.0 83 1-86 174-268 (362)
437 1pgv_A TMD-1, tropomodulin TMD 95.8 0.001 3.5E-08 58.7 -1.1 80 1-80 43-136 (197)
438 3mes_A Choline kinase; malaria 95.5 0.042 1.4E-06 54.8 9.1 140 201-346 76-291 (424)
439 3e4g_A ATP synthase subunit S, 93.8 0.0095 3.2E-07 51.5 -0.4 81 1-81 63-150 (176)
440 1pgv_A TMD-1, tropomodulin TMD 93.8 0.0034 1.2E-07 55.4 -3.4 82 1-82 72-169 (197)
441 3g15_A CK, chetk-alpha, cholin 93.7 0.21 7.1E-06 49.5 9.1 30 317-346 245-280 (401)
442 4fs7_A Uncharacterized protein 93.6 0.072 2.4E-06 52.7 5.6 68 18-90 292-361 (394)
443 4h09_A Hypothetical leucine ri 93.5 0.12 4E-06 50.7 6.8 59 18-78 258-318 (379)
444 4gt6_A Cell surface protein; l 93.2 0.11 3.8E-06 51.2 6.3 95 2-102 268-367 (394)
445 4gt6_A Cell surface protein; l 92.8 0.28 9.7E-06 48.3 8.5 72 16-91 258-330 (394)
446 4h09_A Hypothetical leucine ri 91.7 0.3 1E-05 47.7 7.1 71 17-91 234-306 (379)
447 4fs7_A Uncharacterized protein 90.8 0.21 7.1E-06 49.3 4.8 76 1-80 299-376 (394)
448 3cxl_A N-chimerin; SH2, RHO-GA 84.2 0.12 4.3E-06 52.1 -1.5 59 200-261 147-214 (463)
449 2ks1_B Epidermal growth factor 83.6 0.6 2E-05 29.6 2.0 25 118-142 13-37 (44)
450 4ano_A ESSB; membrane protein, 82.7 3.4 0.00011 36.7 7.3 115 249-399 48-163 (219)
451 2l2t_A Receptor tyrosine-prote 82.6 0.61 2.1E-05 29.5 1.8 26 118-143 12-37 (44)
452 4ann_A ESSB; membrane protein, 82.2 2.3 7.8E-05 37.6 6.0 116 249-399 43-158 (215)
453 2jwa_A Receptor tyrosine-prote 80.1 0.63 2.2E-05 29.4 1.2 7 118-124 14-20 (44)
454 3ls8_A Phosphatidylinositol 3- 61.2 1.3E+02 0.0043 31.1 13.7 84 254-345 402-501 (614)
455 2k1k_A Ephrin type-A receptor 53.9 5.2 0.00018 24.4 1.3 18 117-134 12-29 (38)
456 1cja_A Protein (actin-fragmin 49.9 78 0.0027 29.9 9.2 136 201-346 75-237 (342)
457 2x6h_A GH13170P, VPS34, phosph 48.6 2.6E+02 0.0089 29.3 15.7 45 294-345 529-575 (696)
458 2ks1_B Epidermal growth factor 46.7 18 0.00063 22.7 3.0 30 119-148 11-40 (44)
459 2lz0_A Uncharacterized protein 40.0 44 0.0015 25.2 5.0 38 17-55 14-52 (100)
460 2l2t_A Receptor tyrosine-prote 39.0 23 0.00078 22.3 2.5 26 124-149 15-40 (44)
461 2lz0_A Uncharacterized protein 29.1 67 0.0023 24.1 4.4 46 33-80 6-53 (100)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.5e-56 Score=439.22 Aligned_cols=259 Identities=26% Similarity=0.421 Sum_probs=208.1
Q ss_pred HHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
.+.+.++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++|
T Consensus 42 d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV 121 (329)
T 4aoj_A 42 DIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMV 121 (329)
T ss_dssp GEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEE
T ss_pred HeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 3456789999999999999875 4788999999876666678899999999999999999999999999999999
Q ss_pred EEecCCCCHHhHhhccC------------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEE
Q 010131 270 YEYMHNGTLRDRLHGSV------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAK 337 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~k 337 (517)
||||++|+|.++++... ...+++|.+++.|+.|||.||+|||+ ++|+||||||+|||++.++.+|
T Consensus 122 ~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~~K 198 (329)
T 4aoj_A 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLVVK 198 (329)
T ss_dssp EECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEE
T ss_pred EEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHhhEEECCCCcEE
Confidence 99999999999997542 13469999999999999999999999 9999999999999999999999
Q ss_pred EccccCccccCCCC-cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHH
Q 010131 338 VSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARS 415 (517)
Q Consensus 338 l~Dfg~a~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~ 415 (517)
|+|||+++...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||...+. .+.+ .
T Consensus 199 i~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~------~~~~-~ 271 (329)
T 4aoj_A 199 IGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN------TEAI-D 271 (329)
T ss_dssp ECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH------HHHH-H
T ss_pred EcccccceeccCCCcceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH------HHHH-H
Confidence 99999998764432 223344568999999999999999999999999999999999 8999974322 1112 2
Q ss_pred HHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 416 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 416 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
.+..+..... +...+..+.+|+.+||+.||++||||+||++.|+.+.+.
T Consensus 272 ~i~~g~~~~~---------p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 272 CITQGRELER---------PRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHTCCCCC---------CTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHHS
T ss_pred HHHcCCCCCC---------cccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhhC
Confidence 2333322111 112334688999999999999999999999999988764
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.8e-57 Score=435.21 Aligned_cols=260 Identities=28% Similarity=0.447 Sum_probs=214.8
Q ss_pred HHHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 268 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 268 (517)
..+.+.++||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 34556889999999999999874 477899999987666667889999999999999999999999999999999
Q ss_pred EEEecCCCCHHhHhhccC----------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEE
Q 010131 269 VYEYMHNGTLRDRLHGSV----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKV 338 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~----------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 338 (517)
|||||++|+|.++++... ....++|.+++.++.|||+||+|||+ ++|+||||||+|||++.++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCccCHhhEEECCCCcEEE
Confidence 999999999999997532 24579999999999999999999999 99999999999999999999999
Q ss_pred ccccCccccCCCCc-ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHH
Q 010131 339 SDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSM 416 (517)
Q Consensus 339 ~Dfg~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 416 (517)
+|||+|+....... .......||+.|||||++.+..++.++|||||||++|||+| |+.||...+. .+ +...
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~------~~-~~~~ 242 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN------NE-VIEC 242 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH------HH-HHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HH-HHHH
Confidence 99999987644322 22333468999999999999999999999999999999999 8999974322 12 2223
Q ss_pred HhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 417 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 417 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
+..+..... +...+..+.+|+.+||+.||++|||++||++.|+++.+.
T Consensus 243 i~~~~~~~~---------p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 243 ITQGRVLQR---------PRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HHcCCCCCC---------CccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 333332211 122345688999999999999999999999999987764
No 3
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.3e-56 Score=435.57 Aligned_cols=263 Identities=24% Similarity=0.400 Sum_probs=215.4
Q ss_pred hHHHHHHHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeec
Q 010131 190 PELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEE 262 (517)
Q Consensus 190 ~~l~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 262 (517)
.|+..++++|.++||+|+||+||+|.+. +++.||||+++.... ...++|.+|+.++++++|||||+++|+|.+
T Consensus 21 ~ei~~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~ 100 (308)
T 4gt4_A 21 KEISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTK 100 (308)
T ss_dssp CBCCGGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCCHHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE
Confidence 3445556778899999999999999873 467899999975433 345789999999999999999999999999
Q ss_pred CCeeEEEEEecCCCCHHhHhhccCC-------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeE
Q 010131 263 EHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNIL 329 (517)
Q Consensus 263 ~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nil 329 (517)
++..++|||||++|+|.+++..... ...++|.+++.|+.|||+||+|||+ ++|+||||||+|||
T Consensus 101 ~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLK~~NIL 177 (308)
T 4gt4_A 101 DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDLATRNVL 177 (308)
T ss_dssp SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEE
T ss_pred CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCccccceE
Confidence 9999999999999999999964321 2468999999999999999999999 99999999999999
Q ss_pred eCCCCcEEEccccCccccCCCC-cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccc
Q 010131 330 LDINMRAKVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAEL 407 (517)
Q Consensus 330 l~~~~~~kl~Dfg~a~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~ 407 (517)
|++++.+||+|||+++...... ........||+.|||||++.+..++.++|||||||++|||+| |+.||.+.+.
T Consensus 178 l~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~---- 253 (308)
T 4gt4_A 178 VYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---- 253 (308)
T ss_dssp ECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH----
T ss_pred ECCCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH----
Confidence 9999999999999998764332 223344568999999999999999999999999999999999 8999974332
Q ss_pred cHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhh
Q 010131 408 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSI 471 (517)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~ 471 (517)
.+ +...+..+..... +...+..+.+|+.+||+.||++||||+||++.|+...
T Consensus 254 --~~-~~~~i~~~~~~~~---------p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~~ 305 (308)
T 4gt4_A 254 --QD-VVEMIRNRQVLPC---------PDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAWG 305 (308)
T ss_dssp --HH-HHHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred --HH-HHHHHHcCCCCCC---------cccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhcc
Confidence 11 2223333332221 2233456889999999999999999999999998654
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=2e-55 Score=425.42 Aligned_cols=259 Identities=30% Similarity=0.489 Sum_probs=203.7
Q ss_pred HHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
..+.+.++||+|+||+||+|++++ .||||+++... ....+.|.+|++++++++|||||+++|+|.+ +..++||||
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 344578899999999999999863 69999986432 3445789999999999999999999999865 468999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC-
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL- 351 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 351 (517)
|++|+|.++++.. ...+++.+++.|+.|||.||+|||+ ++|+||||||+|||+++++.+||+|||+|+......
T Consensus 113 ~~gGsL~~~l~~~--~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~ 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQ--ETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187 (307)
T ss_dssp CSSCBHHHHHHTS--CCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC------
T ss_pred CCCCCHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc
Confidence 9999999999742 4579999999999999999999999 999999999999999999999999999998764322
Q ss_pred cccccccccCCCCcCCCccCC---CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCc
Q 010131 352 THISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 428 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 428 (517)
........||+.|||||++.+ ..++.++|||||||++|||+||+.||...+.. ..+...+..+... |
T Consensus 188 ~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~------~~~~~~~~~~~~~----p 257 (307)
T 3omv_A 188 SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNR------DQIIFMVGRGYAS----P 257 (307)
T ss_dssp ------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCH------HHHHHHHHTTCCC----C
T ss_pred ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChH------HHHHHHHhcCCCC----C
Confidence 223344579999999999853 46899999999999999999999999743221 1122223222211 1
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 429 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 429 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
.+ .......+..+.+++.+||+.||++||||+||++.|+.+..
T Consensus 258 ~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~ 300 (307)
T 3omv_A 258 DL-SKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQH 300 (307)
T ss_dssp CS-TTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHT
T ss_pred Cc-ccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhc
Confidence 11 11122334578899999999999999999999999987654
No 5
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=4.2e-54 Score=420.06 Aligned_cols=261 Identities=24% Similarity=0.272 Sum_probs=209.3
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCC
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 275 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 275 (517)
+.+.++||+|+||+||+|++. +|+.||||+++.... ..+|+.++++++|||||++++++.+++..|+|||||+|
T Consensus 60 ~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 134 (336)
T 4g3f_A 60 MTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEG 134 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred eEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCC
Confidence 445678999999999999876 689999999975422 24699999999999999999999999999999999999
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC-cEEEccccCccccCCCCcc-
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEEDLTH- 353 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~a~~~~~~~~~- 353 (517)
|+|.++++. .+.+++..+..++.||+.||+|||+ ++|+||||||+|||++.++ ++||+|||+|+........
T Consensus 135 g~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~ 208 (336)
T 4g3f_A 135 GSLGQLIKQ---MGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK 208 (336)
T ss_dssp CBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC-------
T ss_pred CcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc
Confidence 999999974 4579999999999999999999999 9999999999999999987 6999999999876543211
Q ss_pred ---cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 354 ---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 354 ---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
......||+.|||||++.+..++.++|||||||++|||+||+.||........ .. ..........
T Consensus 209 ~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~---~~---~i~~~~~~~~------ 276 (336)
T 4g3f_A 209 SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPL---CL---KIASEPPPIR------ 276 (336)
T ss_dssp -----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCC---HH---HHHHSCCGGG------
T ss_pred ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHH---HH---HHHcCCCCch------
Confidence 12335699999999999999999999999999999999999999975433221 11 1111111100
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcCCCCCcc
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKFS 482 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~~~ 482 (517)
..+......+.+++.+||+.||++|||+.|+++.|...+.....-...|-
T Consensus 277 --~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~ 326 (336)
T 4g3f_A 277 --EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWK 326 (336)
T ss_dssp --GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSS
T ss_pred --hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCc
Confidence 11112234678999999999999999999999999888766554444443
No 6
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=4.3e-54 Score=421.20 Aligned_cols=247 Identities=24% Similarity=0.353 Sum_probs=206.4
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCC
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 275 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 275 (517)
|++.++||+|+||+||+|++. +|+.||||++........+.+.+|+++|++++|||||+++++|.+++..|+|||||+|
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~g 155 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 155 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTT
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 556788999999999999886 6999999999765555566789999999999999999999999999999999999999
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcccc
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 355 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 355 (517)
|+|.+++.. ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+........ .
T Consensus 156 g~L~~~l~~----~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~ 227 (346)
T 4fih_A 156 GALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-R 227 (346)
T ss_dssp EEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-B
T ss_pred CcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-c
Confidence 999999973 469999999999999999999999 99999999999999999999999999999887554332 3
Q ss_pred cccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCCC
Q 010131 356 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 435 (517)
Q Consensus 356 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 435 (517)
...+||+.|||||++.+..|+.++||||+||++|||++|+.||...+. .+.. ..+..+....... .
T Consensus 228 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~-~~i~~~~~~~~~~-------~ 293 (346)
T 4fih_A 228 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAM-KMIRDNLPPRLKN-------L 293 (346)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHH-HHHHHSSCCCCSC-------G
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHH-HHHHcCCCCCCCc-------c
Confidence 446799999999999999999999999999999999999999974322 1111 1222221111111 1
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 436 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 436 ~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
......+.+|+.+||+.||++|||++|+++
T Consensus 294 ~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 294 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp GGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112346789999999999999999999876
No 7
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=3.7e-54 Score=422.31 Aligned_cols=249 Identities=26% Similarity=0.380 Sum_probs=202.3
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
.|++.+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..|+||||
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy 104 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDY 104 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 4777899999999999999876 69999999997542 33457899999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
|+||+|.+++... ....+++.+++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.......
T Consensus 105 ~~gg~L~~~i~~~-~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 105 CEGGDLFKRINAQ-KGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CTTCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCcHHHHHHHc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 9999999999753 34568999999999999999999999 9999999999999999999999999999987654322
Q ss_pred ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 353 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
......||+.|||||++.+..++.++|||||||++|||+||+.||...+ ..+.+.... .+.... +..
T Consensus 181 -~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~------~~~~~~~i~-~~~~~~-----~~~ 247 (350)
T 4b9d_A 181 -LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS------MKNLVLKII-SGSFPP-----VSL 247 (350)
T ss_dssp -HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS------HHHHHHHHH-HTCCCC-----CCT
T ss_pred -cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC------HHHHHHHHH-cCCCCC-----CCc
Confidence 2234569999999999999999999999999999999999999997432 222222222 232211 111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.....+.+|+.+||+.||++|||++|+++
T Consensus 248 ----~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 248 ----HYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp ----TSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 12346889999999999999999999986
No 8
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=2.3e-53 Score=408.03 Aligned_cols=244 Identities=29% Similarity=0.436 Sum_probs=197.5
Q ss_pred hhhcccCCCCceEEEEEEec-CCcEEEEEEecCC--CchhHHHHHHHHHHHhcCCCCCccccceeeec----CCeeEEEE
Q 010131 198 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILVY 270 (517)
Q Consensus 198 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv~ 270 (517)
+|.++||+|+||+||+|.+. +++.||+|++... .....+.|.+|++++++++|||||+++++|.+ ++..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 35678999999999999876 6899999999653 23345679999999999999999999999865 34579999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--cEecCCCCCCeEeCC-CCcEEEccccCcccc
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDI-NMRAKVSDFGLSRQA 347 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~dlk~~Nill~~-~~~~kl~Dfg~a~~~ 347 (517)
|||++|+|.+++.. ...+++..+..++.||+.||+|||+ ++ |+||||||+|||++. ++.+||+|||+|+..
T Consensus 109 Ey~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~ylH~---~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~ 182 (290)
T 3fpq_A 109 ELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp ECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCEEecccChhheeEECCCCCEEEEeCcCCEeC
Confidence 99999999999984 4679999999999999999999998 77 999999999999984 799999999999865
Q ss_pred CCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccC
Q 010131 348 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 427 (517)
Q Consensus 348 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 427 (517)
... ......||+.|||||++.+ .++.++|||||||++|||+||+.||..... ... +...+..+......+
T Consensus 183 ~~~---~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~~Pf~~~~~-----~~~-~~~~i~~~~~~~~~~ 252 (290)
T 3fpq_A 183 RAS---FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQ-IYRRVTSGVKPASFD 252 (290)
T ss_dssp CTT---SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHH-HHHHHTTTCCCGGGG
T ss_pred CCC---ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCCCCCCCCCc-----HHH-HHHHHHcCCCCCCCC
Confidence 432 2334579999999999876 699999999999999999999999963321 111 222333332211111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 428 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 428 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+. . ...+.+|+.+||+.||++|||++|+++
T Consensus 253 ~~----~----~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 253 KV----A----IPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GC----C----CHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cc----C----CHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 11 1 225789999999999999999999875
No 9
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3e-53 Score=412.76 Aligned_cols=267 Identities=25% Similarity=0.384 Sum_probs=201.6
Q ss_pred HhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCC----eeEEEEEe
Q 010131 197 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVYEY 272 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~e~ 272 (517)
+.+.++||+|+||+||+|+++ |+.||||++.... .....+..|+..+.+++|||||+++++|.+++ ..++||||
T Consensus 5 i~L~~~iG~G~fG~Vy~~~~~-g~~VAvK~l~~~~-~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey 82 (303)
T 3hmm_A 5 IVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE-ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp EEEEEEEEECSSSEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred EEEEEEEeeCCCeEEEEEEEC-CEEEEEEEECccc-hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecC
Confidence 445789999999999999985 8999999996432 22222344666667889999999999997654 57999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcC-----CCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG-----CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~-----~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
|++|+|.++++. ..++|..+.+++.|++.||+|||+. ..++|+||||||+|||++.++.+||+|||+|+..
T Consensus 83 ~~~gsL~~~l~~----~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~ 158 (303)
T 3hmm_A 83 HEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp CTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred CCCCcHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccc
Confidence 999999999973 4699999999999999999999972 1249999999999999999999999999999876
Q ss_pred CCCCcc---cccccccCCCCcCCCccCCC------CCCccceehhHHHHHHHHHhCCCCCCCCCcc---------ccccH
Q 010131 348 EEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNI 409 (517)
Q Consensus 348 ~~~~~~---~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg~~p~~~~~~~---------~~~~~ 409 (517)
...... ......||+.|||||++.+. .++.++|||||||++|||+||+.||...... .....
T Consensus 159 ~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~ 238 (303)
T 3hmm_A 159 DSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV 238 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred cCCCCceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchH
Confidence 543322 12335699999999998764 4678999999999999999998887532211 11112
Q ss_pred HHHHHHHHhcCCcccccCccccCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 410 VHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 410 ~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.+ +...+..+. ++|.+... ...+.+..+.+|+.+||+.||++||||+||++.|+++.+.+
T Consensus 239 ~~-~~~~~~~~~----~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l~~~~ 299 (303)
T 3hmm_A 239 EE-MRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp HH-HHHHHTTSC----CCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHHHHC-
T ss_pred HH-HHHHHhccc----CCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHHHHHc
Confidence 22 222222211 22222211 13356678899999999999999999999999999887643
No 10
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=8.5e-54 Score=422.97 Aligned_cols=266 Identities=26% Similarity=0.399 Sum_probs=216.5
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEecC------CcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCC-CCccccceeeec
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHH-RNLVPLIGYCEE 262 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~ 262 (517)
|+....+++.+.||+|+||+||+|.+.. ++.||||++..... ...+.|.+|+++|.+++| ||||+++|+|.+
T Consensus 60 Ei~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~ 139 (353)
T 4ase_A 60 EFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK 139 (353)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC
T ss_pred EecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe
Confidence 4455667788999999999999998752 36899999976543 345679999999999965 999999999966
Q ss_pred C-CeeEEEEEecCCCCHHhHhhccC-------------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCe
Q 010131 263 E-HQRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 328 (517)
Q Consensus 263 ~-~~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Ni 328 (517)
. +..++|||||++|+|.++++... ....+++.+++.++.|||+||+|||+ ++|+||||||+||
T Consensus 140 ~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiHRDLK~~NI 216 (353)
T 4ase_A 140 PGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNI 216 (353)
T ss_dssp TTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGE
T ss_pred cCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhh---CCeecCccCccce
Confidence 4 56899999999999999997532 13468999999999999999999999 9999999999999
Q ss_pred EeCCCCcEEEccccCccccCCCCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCcccc
Q 010131 329 LLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAE 406 (517)
Q Consensus 329 ll~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~ 406 (517)
|+++++.+||+|||+|+........ ......||+.|||||++.+..++.++|||||||++|||+| |+.||.......
T Consensus 217 Ll~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~- 295 (353)
T 4ase_A 217 LLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE- 295 (353)
T ss_dssp EECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH-
T ss_pred eeCCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHH-
Confidence 9999999999999999876544332 2344568999999999999999999999999999999998 999997433221
Q ss_pred ccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 407 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.+...+..+...... ...+..+.+++.+||+.||++|||++||++.|+++++..
T Consensus 296 -----~~~~~i~~g~~~~~p---------~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~llq~~ 349 (353)
T 4ase_A 296 -----EFCRRLKEGTRMRAP---------DYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQAN 349 (353)
T ss_dssp -----HHHHHHHHTCCCCCC---------TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred -----HHHHHHHcCCCCCCC---------ccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHHHh
Confidence 122334433322211 112346889999999999999999999999999988753
No 11
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=7.4e-53 Score=422.48 Aligned_cols=247 Identities=24% Similarity=0.353 Sum_probs=206.7
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCC
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 275 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 275 (517)
|++.++||+|+||.||+|++. +|+.||||++........+.+.+|+.+|++++|||||+++++|.+++..|+|||||+|
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred cEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCC
Confidence 566789999999999999886 6999999999766555567789999999999999999999999999999999999999
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcccc
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 355 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 355 (517)
|+|.+++.. ..+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+........ .
T Consensus 233 G~L~~~i~~----~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~ 304 (423)
T 4fie_A 233 GALTDIVTH----TRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-R 304 (423)
T ss_dssp EEHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-B
T ss_pred CcHHHHHhc----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-c
Confidence 999999963 469999999999999999999999 99999999999999999999999999999877554332 3
Q ss_pred cccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCCC
Q 010131 356 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVK 435 (517)
Q Consensus 356 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~ 435 (517)
...+||+.|||||++.+..|+.++|||||||++|||++|+.||...+. .+.. ..+..+....... .
T Consensus 305 ~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~-~~i~~~~~~~~~~-------~ 370 (423)
T 4fie_A 305 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP------LKAM-KMIRDNLPPRLKN-------L 370 (423)
T ss_dssp CCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHH-HHHHHSCCCCCSC-------T
T ss_pred cccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH------HHHH-HHHHcCCCCCCcc-------c
Confidence 445799999999999999999999999999999999999999974322 1111 1222221111111 0
Q ss_pred HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 436 IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 436 ~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
......+.+|+.+||+.||++|||++|+++
T Consensus 371 ~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 371 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp TSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 112236789999999999999999999876
No 12
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=3.3e-53 Score=408.76 Aligned_cols=247 Identities=23% Similarity=0.348 Sum_probs=207.1
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|++.+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..|+|||
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmE 112 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLS 112 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 4778899999999999999876 69999999996431 2345779999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
||+||+|.+++.. .+.+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 113 y~~gG~L~~~i~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~ 186 (311)
T 4aw0_A 113 YAKNGELLKYIRK---IGSFDETCTRFYTAEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES 186 (311)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT
T ss_pred cCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC
Confidence 9999999999974 4679999999999999999999999 999999999999999999999999999999865432
Q ss_pred -cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 352 -THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 352 -~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
.......+||+.|||||++.+..++.++||||+||++|||+||+.||...+. .+.... +..+... +
T Consensus 187 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~------~~~~~~-i~~~~~~------~ 253 (311)
T 4aw0_A 187 KQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE------GLIFAK-IIKLEYD------F 253 (311)
T ss_dssp TCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHH-HHHTCCC------C
T ss_pred CcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH------HHHHHH-HHcCCCC------C
Confidence 2234456799999999999999999999999999999999999999974332 122222 2222221 1
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.... ...+.+|+.+||+.||++|||++|++.
T Consensus 254 p~~~----s~~~~dli~~lL~~dp~~R~t~~e~~~ 284 (311)
T 4aw0_A 254 PEKF----FPKARDLVEKLLVLDATKRLGCEEMEG 284 (311)
T ss_dssp CTTC----CHHHHHHHHHHSCSSGGGSTTSGGGTC
T ss_pred Cccc----CHHHHHHHHHHccCCHhHCcChHHHcC
Confidence 1112 235789999999999999999998743
No 13
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.7e-52 Score=394.80 Aligned_cols=244 Identities=25% Similarity=0.368 Sum_probs=191.1
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|++.+.||+|+||+||+|+.. +|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..++|||
T Consensus 14 ~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmE 93 (275)
T 3hyh_A 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIE 93 (275)
T ss_dssp CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEe
Confidence 5777899999999999999875 69999999997542 2335679999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+ +|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+......
T Consensus 94 y~-~g~L~~~l~~---~~~l~e~~~~~~~~qi~~al~ylH~---~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~ 166 (275)
T 3hyh_A 94 YA-GNELFDYIVQ---RDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN 166 (275)
T ss_dssp CC-CEEHHHHHHH---SCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTCCEEECCSSCC-------
T ss_pred CC-CCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCChHHeEECCCCCEEEeecCCCeecCCCC
Confidence 99 6899999874 5679999999999999999999999 999999999999999999999999999998765432
Q ss_pred cccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
......||+.|+|||++.+..+ +.++||||+||++|||+||+.||...+. .... ..+..+... +
T Consensus 167 --~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~------~~~~-~~i~~~~~~------~ 231 (275)
T 3hyh_A 167 --FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI------PVLF-KNISNGVYT------L 231 (275)
T ss_dssp ----------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-HHHHHTCCC------C
T ss_pred --ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH------HHHH-HHHHcCCCC------C
Confidence 2234569999999999988776 5799999999999999999999974322 2222 222222211 1
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
... ....+.+++.+||+.||++|||++|+++
T Consensus 232 p~~----~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 232 PKF----LSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CTT----SCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCC----CCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 111 1235789999999999999999999987
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=4e-52 Score=401.27 Aligned_cols=241 Identities=25% Similarity=0.324 Sum_probs=192.4
Q ss_pred HHhhhcccCCCCceEEEEEEec----CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
.|++.+.||+|+||+||+|+.. .++.||||+++... ......+.+|++++++++|||||++++++.+++..|+|
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~iv 104 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLI 104 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEE
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 4778899999999999999763 47899999997532 22334688899999999999999999999999999999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
||||+||+|.+++.. .+.+++.++..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+....
T Consensus 105 mEy~~gg~L~~~l~~---~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 178 (304)
T 3ubd_A 105 LDFLRGGDLFTRLSK---EVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKESID 178 (304)
T ss_dssp ECCCTTCEEHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTSCEEEESSEEEEC---
T ss_pred EEcCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHeEEcCCCCEEecccccceeccC
Confidence 999999999999984 4679999999999999999999999 9999999999999999999999999999987543
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
... ......||+.|||||++.+..++.++||||+||++|||+||+.||...+. .+...... .+...
T Consensus 179 ~~~-~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~------~~~~~~i~-~~~~~------ 244 (304)
T 3ubd_A 179 HEK-KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDR------KETMTMIL-KAKLG------ 244 (304)
T ss_dssp --C-CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HCCCC------
T ss_pred CCc-cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCH------HHHHHHHH-cCCCC------
Confidence 322 23345799999999999999999999999999999999999999974332 22222222 22211
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 460 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 460 (517)
.... ....+.+++.+||+.||++|||+
T Consensus 245 ~p~~----~s~~~~~li~~~L~~dP~~R~ta 271 (304)
T 3ubd_A 245 MPQF----LSPEAQSLLRMLFKRNPANRLGA 271 (304)
T ss_dssp CCTT----SCHHHHHHHHHHTCSSGGGSTTC
T ss_pred CCCc----CCHHHHHHHHHHcccCHHHCCCC
Confidence 1111 22357899999999999999985
No 15
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=5.9e-51 Score=394.75 Aligned_cols=249 Identities=23% Similarity=0.356 Sum_probs=189.1
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCC---------
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--------- 264 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--------- 264 (517)
.|++.+.||+|+||+||+|++. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.+.+
T Consensus 6 dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~ 85 (299)
T 4g31_A 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSS 85 (299)
T ss_dssp HEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---------
T ss_pred hCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccC
Confidence 3667899999999999999876 689999999875433 34567999999999999999999999986544
Q ss_pred ---eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccc
Q 010131 265 ---QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDF 341 (517)
Q Consensus 265 ---~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 341 (517)
..|+|||||++|+|.+++.........++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+||
T Consensus 86 ~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~---~~IiHRDlKp~NILl~~~~~vKl~DF 162 (299)
T 4g31_A 86 PKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDF 162 (299)
T ss_dssp -CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCC
T ss_pred CCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH---CcCccccCcHHHeEECCCCcEEEccC
Confidence 368999999999999999864433456677789999999999999999 99999999999999999999999999
Q ss_pred cCccccCCCCcc-----------cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHH
Q 010131 342 GLSRQAEEDLTH-----------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 410 (517)
Q Consensus 342 g~a~~~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~ 410 (517)
|+|+........ ......||+.|||||++.+..++.++|||||||++|||++ ||.... ...
T Consensus 163 Gla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~-----~~~ 234 (299)
T 4g31_A 163 GLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQM-----ERV 234 (299)
T ss_dssp CCC--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHH-----HHH
T ss_pred ccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCcc-----HHH
Confidence 999876543221 1223469999999999999999999999999999999996 775211 111
Q ss_pred HHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 411 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 411 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
..+ ..+........ .......+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~~-~~~~~~~~p~~---------~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 235 RTL-TDVRNLKFPPL---------FTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp HHH-HHHHTTCCCHH---------HHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHH-HHHhcCCCCCC---------CcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111 11222222111 1122335678999999999999999999876
No 16
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=6.4e-48 Score=380.15 Aligned_cols=276 Identities=41% Similarity=0.718 Sum_probs=242.9
Q ss_pred HhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCCC
Q 010131 197 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNG 276 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~g 276 (517)
|++.+.||+|+||.||+|.+++++.||||++........+.+.+|+.++++++||||+++++++.+.+..++||||+++|
T Consensus 41 y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 120 (321)
T 2qkw_B 41 FDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENG 120 (321)
T ss_dssp CSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTC
T ss_pred cCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCC
Confidence 44578899999999999998889999999988766666788999999999999999999999999999999999999999
Q ss_pred CHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC-ccc
Q 010131 277 TLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-THI 354 (517)
Q Consensus 277 sL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~~~ 354 (517)
+|.+++.... ....+++..++.++.|++.||+|||+ ++++||||||+||+++.++.+||+|||++....... ...
T Consensus 121 ~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 197 (321)
T 2qkw_B 121 NLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHL 197 (321)
T ss_dssp BTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCC
T ss_pred cHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcC---CCeecCCCCHHHEEECCCCCEEEeeccccccccccccccc
Confidence 9999997543 23469999999999999999999999 999999999999999999999999999998654322 222
Q ss_pred ccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCC
Q 010131 355 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 434 (517)
Q Consensus 355 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 434 (517)
.....||+.|+|||.+.+..++.++||||||+++|||+||+.||.............|.......+.+...+++.+....
T Consensus 198 ~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (321)
T 2qkw_B 198 STVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKI 277 (321)
T ss_dssp BCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCS
T ss_pred ccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhcccc
Confidence 23345899999999998889999999999999999999999999866655666777777777777788888888887788
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 435 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 435 ~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
..+.+..+.+++.+||+.||++|||++||++.|+.+++...
T Consensus 278 ~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~~ 318 (321)
T 2qkw_B 278 RPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQE 318 (321)
T ss_dssp CHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSC
T ss_pred CHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhccc
Confidence 88999999999999999999999999999999999987654
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.6e-48 Score=387.45 Aligned_cols=259 Identities=19% Similarity=0.315 Sum_probs=198.9
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeec------CCee
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 266 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~ 266 (517)
.|++.+.||+|+||+||+|++. +|+.||||+++.... ...+.+.+|+++|++++|||||++++++.. .+..
T Consensus 55 ~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~ 134 (398)
T 4b99_A 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSV 134 (398)
T ss_dssp SEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCE
T ss_pred CeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEE
Confidence 4677899999999999999876 799999999975432 345678899999999999999999998753 3578
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
|+|||||+ |+|.+++. ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+|+.
T Consensus 135 ~ivmE~~~-g~L~~~i~---~~~~l~~~~~~~~~~qil~al~ylH~---~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~ 207 (398)
T 4b99_A 135 YVVLDLME-SDLHQIIH---SSQPLTLEHVRYFLYQLLRGLKYMHS---AQVIHRDLKPSNLLVNENCELKIGDFGMARG 207 (398)
T ss_dssp EEEEECCS-EEHHHHHT---SSSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBC
T ss_pred EEEEeCCC-CCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CcCcCCCcCccccccCCCCCEEEeecceeee
Confidence 99999995 68999997 45689999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCC---cccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 347 AEEDL---THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 347 ~~~~~---~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
..... ........||+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+ ....+.........
T Consensus 208 ~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~---~l~~I~~~~g~p~~ 284 (398)
T 4b99_A 208 LCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVH---QLQLIMMVLGTPSP 284 (398)
T ss_dssp C-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHH---HHHHHHHHHCCCCG
T ss_pred cccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHH---HHHHHHHhcCCCCh
Confidence 64322 2223456799999999998775 56899999999999999999999997543221 11111111110000
Q ss_pred ccccCc-----------ccc--CCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 423 ISIVDP-----------VLI--GNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 423 ~~~~d~-----------~l~--~~~~-----~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
..... .+. ...+ ......+.+|+.+||+.||++|||++|+++
T Consensus 285 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 285 -AVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp -GGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -HHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 00000 000 0000 011235789999999999999999999876
No 18
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=1.3e-47 Score=378.75 Aligned_cols=286 Identities=40% Similarity=0.704 Sum_probs=241.9
Q ss_pred cccChhHHHHHHHh--hhcccCCCCceEEEEEEecCCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeee
Q 010131 185 YFIPLPELEEATNN--FCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCE 261 (517)
Q Consensus 185 ~~~~~~~l~~~~~~--~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 261 (517)
..+++.++.....+ +.+.||+|+||.||+|...+|+.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 18 ~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~ 97 (326)
T 3uim_A 18 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCM 97 (326)
T ss_dssp EECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEEC
T ss_pred ceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEe
Confidence 34556666655544 4789999999999999988899999999875432 22346899999999999999999999999
Q ss_pred cCCeeEEEEEecCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEcc
Q 010131 262 EEHQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 340 (517)
Q Consensus 262 ~~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 340 (517)
+.+..++||||+++|+|.+++.... ....+++..+..++.|++.||+|||+.+..+|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~D 177 (326)
T 3uim_A 98 TPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD 177 (326)
T ss_dssp CSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECC
T ss_pred cCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEecc
Confidence 9999999999999999999998654 344699999999999999999999992222999999999999999999999999
Q ss_pred ccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCC--ccccccHHHHHHHHHh
Q 010131 341 FGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED--FGAELNIVHWARSMIK 418 (517)
Q Consensus 341 fg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~--~~~~~~~~~~~~~~~~ 418 (517)
||++...............||+.|+|||.+.+..++.++||||||+++|+|+||+.||.... .........|+.....
T Consensus 178 fg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 257 (326)
T 3uim_A 178 FGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLK 257 (326)
T ss_dssp CSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTS
T ss_pred CccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhh
Confidence 99998776554444555668999999999988889999999999999999999999996322 2234566777777777
Q ss_pred cCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 010131 419 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 470 (517)
Q Consensus 419 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 470 (517)
........+..+...........+.+++.+||+.||.+|||++||++.|++.
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~ 309 (326)
T 3uim_A 258 EKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGD 309 (326)
T ss_dssp SCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTS
T ss_pred chhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCc
Confidence 7777888888888888889999999999999999999999999999999864
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.9e-47 Score=378.76 Aligned_cols=194 Identities=25% Similarity=0.416 Sum_probs=167.2
Q ss_pred HHhhhcccCCCCceEEEEEEec----CCcEEEEEEecCCCchhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 270 (517)
.|++.++||+|+||+||+|+.+ .++.||||++.... ...++.+|+++|+.+ +||||+++++++.+.+..++||
T Consensus 22 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvm 99 (361)
T 4f9c_A 22 VFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAM 99 (361)
T ss_dssp TCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEE
T ss_pred cEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEE
Confidence 4677899999999999999764 46789999986543 345688999999998 6999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC-CcEEEccccCccccCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQAEE 349 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~a~~~~~ 349 (517)
||+++|+|.+++. .+++.++..++.|++.||+|||+ +||+||||||+|||++.+ +.+||+|||+|+....
T Consensus 100 E~~~g~~L~~~~~------~l~~~~~~~~~~qll~al~ylH~---~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~ 170 (361)
T 4f9c_A 100 PYLEHESFLDILN------SLSFQEVREYMLNLFKALKRIHQ---FGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHD 170 (361)
T ss_dssp ECCCCCCHHHHHT------TCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECTT
T ss_pred eCCCcccHHHHHc------CCCHHHHHHHHHHHHHHHHHHHH---CCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCC
Confidence 9999999999984 48999999999999999999999 999999999999999877 7999999999986543
Q ss_pred CCcc---------------------------cccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCC
Q 010131 350 DLTH---------------------------ISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSV 400 (517)
Q Consensus 350 ~~~~---------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~ 400 (517)
.... ......||+.|+|||++.+. .++.++||||+||++|||+||+.||..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 171 TKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp CSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred ccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 2111 11234699999999998775 589999999999999999999999963
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.9e-46 Score=395.03 Aligned_cols=250 Identities=21% Similarity=0.334 Sum_probs=207.7
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
.|++.+.||+|+||.||+|..+ +|+.||+|++........+.+.+|+.+|+.++|||||+++++|.+.+..++|||||+
T Consensus 158 ~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~ 237 (573)
T 3uto_A 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMS 237 (573)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecC
Confidence 5677899999999999999876 699999999987666667789999999999999999999999999999999999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC--CcEEEccccCccccCCCCc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN--MRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~--~~~kl~Dfg~a~~~~~~~~ 352 (517)
||+|.+++.. ....+++.++..++.||+.||+|||+ ++|+||||||+|||++.+ +.+||+|||+++.......
T Consensus 238 gg~L~~~i~~--~~~~l~e~~~~~~~~qi~~al~ylH~---~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~ 312 (573)
T 3uto_A 238 GGELFEKVAD--EHNKMSEDEAVEYMRQVCKGLCHMHE---NNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312 (573)
T ss_dssp CCBHHHHHTC--TTSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE
T ss_pred CCcHHHHHHH--hCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc
Confidence 9999999864 24579999999999999999999999 999999999999999854 8999999999998755432
Q ss_pred ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 353 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
.....||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+.. +... .+..+... +.+....
T Consensus 313 --~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~------~~~~-~i~~~~~~--~~~~~~~ 381 (573)
T 3uto_A 313 --VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD------ETLR-NVKSCDWN--MDDSAFS 381 (573)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHH-HHHTTCCC--CCSGGGT
T ss_pred --eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH------HHHH-HHHhCCCC--CCccccc
Confidence 23456999999999999999999999999999999999999999743321 1122 22222110 0111111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. ....+.+|+.+||+.||.+|||++|+++
T Consensus 382 ~----~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 382 G----ISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp T----SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred C----CCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 1235779999999999999999999986
No 21
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=1.6e-46 Score=393.00 Aligned_cols=246 Identities=22% Similarity=0.276 Sum_probs=196.9
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHH---HHHHHHhcCCCCCccccceeeecCCeeEEE
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFV---TEVALLSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~---~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
|++.++||+|+||+||+|+.. +|+.||||++.+.. ......+. .++.+++.++|||||+++++|.+.+..|+|
T Consensus 191 f~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylV 270 (689)
T 3v5w_A 191 FSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFI 270 (689)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEE
Confidence 456789999999999999876 69999999996431 12223333 346677788999999999999999999999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
||||+||+|.+++.. .+.+++..+..++.||+.||+|||+ ++|+||||||+|||++.+|++||+|||+|+....
T Consensus 271 mEy~~GGdL~~~l~~---~~~l~E~~a~~y~~qIl~aL~yLH~---~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~ 344 (689)
T 3v5w_A 271 LDLMNGGDLHYHLSQ---HGVFSEADMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDFSK 344 (689)
T ss_dssp ECCCCSCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSS
T ss_pred EecCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHeEEeCCCCEEecccceeeecCC
Confidence 999999999999984 4679999999999999999999999 9999999999999999999999999999987754
Q ss_pred CCcccccccccCCCCcCCCccC-CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCc
Q 010131 350 DLTHISSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 428 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 428 (517)
.. ....+||+.|||||++. +..|+.++|+||+||++|||++|+.||......+. .+...... ....
T Consensus 345 ~~---~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~---~~i~~~i~-~~~~------ 411 (689)
T 3v5w_A 345 KK---PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK---HEIDRMTL-TMAV------ 411 (689)
T ss_dssp CC---CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCH---HHHHHHHH-HCCC------
T ss_pred CC---CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHH---HHHHHhhc-CCCC------
Confidence 33 23457999999999996 45799999999999999999999999974333221 12112211 1111
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 010131 429 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 465 (517)
Q Consensus 429 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~evl~ 465 (517)
.+... ....+.+|+.+||+.||.+|++ ++||++
T Consensus 412 ~~p~~----~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 412 ELPDS----FSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CCCTT----SCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCCcc----CCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 01111 1235789999999999999998 677754
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.3e-45 Score=360.07 Aligned_cols=259 Identities=25% Similarity=0.388 Sum_probs=213.3
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
.|.+.+.||+|+||+||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++.+++..++||||++
T Consensus 11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 90 (310)
T 3s95_A 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIK 90 (310)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecC
Confidence 4566789999999999999886 689999999877666677889999999999999999999999999999999999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCccc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 354 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 354 (517)
+|+|.+++... ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++..........
T Consensus 91 ~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 91 GGTLRGIIKSM--DSQYPWSQRVSFAKDIASGMAYLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp TCBHHHHHHHC--CTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred CCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 99999999753 4679999999999999999999999 999999999999999999999999999998764432211
Q ss_pred -------------ccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccc---cccHHHHHHHHHh
Q 010131 355 -------------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA---ELNIVHWARSMIK 418 (517)
Q Consensus 355 -------------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~---~~~~~~~~~~~~~ 418 (517)
.....||+.|+|||++.+..++.++||||||+++|||++|..||....... ...........
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~-- 243 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRY-- 243 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHHT--
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccccc--
Confidence 114468999999999999999999999999999999999999987432221 11111111110
Q ss_pred cCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcC
Q 010131 419 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 476 (517)
Q Consensus 419 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 476 (517)
. +...+..+.+++.+||+.||++|||++|+++.|+.+......
T Consensus 244 -----------~----~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~~~~~~ 286 (310)
T 3s95_A 244 -----------C----PPNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLRMHLAG 286 (310)
T ss_dssp -----------C----CTTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------C----CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhccC
Confidence 0 011122578999999999999999999999999998876543
No 23
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=2.3e-45 Score=359.63 Aligned_cols=262 Identities=34% Similarity=0.501 Sum_probs=203.1
Q ss_pred HHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
...|++.+.||+|+||+||+|++. |+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEEC-CCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 345677899999999999999875 8899999987543 2344678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--cEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|+++|+|.+++........+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++.+||+|||+++....
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~ 191 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN---RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAS 191 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT---SSSCCCCTTCCGGGEEECTTCCEEECCCC-------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc---CCCCEECCCCChhhEEEeCCCcEEECCCCCCccccc
Confidence 99999999999853222349999999999999999999999 88 99999999999999999999999999986543
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.............
T Consensus 192 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~------~~~~~~~~~~~~~~----- 259 (309)
T 3p86_A 192 TFL-SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA------QVVAAVGFKCKRLE----- 259 (309)
T ss_dssp -----------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHHSCCCCC-----
T ss_pred ccc-ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhcCCCCC-----
Confidence 322 123345899999999999999999999999999999999999999743221 11111111111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
.+......+.+++.+||+.||++|||++|+++.|+.+++...
T Consensus 260 ----~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~~~ 301 (309)
T 3p86_A 260 ----IPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAV 301 (309)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC---
T ss_pred ----CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhCC
Confidence 111223468899999999999999999999999999887544
No 24
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.7e-45 Score=366.39 Aligned_cols=263 Identities=24% Similarity=0.455 Sum_probs=213.8
Q ss_pred HHHhhhcccCCCCceEEEEEEec--------CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcC-CCCCccccceeeecCC
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 264 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 264 (517)
..|.+.+.||+|+||.||+|.+. ++..||||+++.... ...+.+.+|+.+++++ +||||++++++|.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 45667889999999999999863 356799999976533 3456799999999999 8999999999999999
Q ss_pred eeEEEEEecCCCCHHhHhhccC-------------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC
Q 010131 265 QRILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 331 (517)
Q Consensus 265 ~~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~ 331 (517)
..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchhhEEEC
Confidence 9999999999999999997542 12458999999999999999999999 9999999999999999
Q ss_pred CCCcEEEccccCccccCCCCc-ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccH
Q 010131 332 INMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI 409 (517)
Q Consensus 332 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~ 409 (517)
.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||+| |+.||....... .
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~---~ 314 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---L 314 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---H
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHH---H
Confidence 999999999999987644322 12233446789999999999999999999999999999999 999997443221 1
Q ss_pred HHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcC
Q 010131 410 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 476 (517)
Q Consensus 410 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 476 (517)
. ..+..+.... .+......+.+++.+||+.||++|||+.|+++.|++++.....
T Consensus 315 ~----~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il~~~~~ 368 (370)
T 2psq_A 315 F----KLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTN 368 (370)
T ss_dssp H----HHHHTTCCCC---------CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred H----HHHhcCCCCC---------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHhcc
Confidence 1 1222222111 1112334688999999999999999999999999999877543
No 25
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=7.5e-45 Score=354.07 Aligned_cols=248 Identities=24% Similarity=0.368 Sum_probs=205.6
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
.|++.+.||+|+||+||+|... +++.||||++........+.+.+|+.++++++||||+++++++...+..++||||++
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 100 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCC
Confidence 4556789999999999999864 689999999976655667789999999999999999999999999999999999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCccc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 354 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 354 (517)
+|+|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 101 ~~~L~~~~~~----~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 172 (297)
T 3fxz_A 101 GGSLTDVVTE----TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK- 172 (297)
T ss_dssp TCBHHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-
T ss_pred CCCHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-
Confidence 9999999974 368999999999999999999999 99999999999999999999999999999876544332
Q ss_pred ccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCC
Q 010131 355 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 434 (517)
Q Consensus 355 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 434 (517)
.....||+.|+|||.+.+..++.++|||||||++|||+||+.||...+.. .........+.. ... .
T Consensus 173 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~~~~~~~-~~~-------~ 238 (297)
T 3fxz_A 173 RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL------RALYLIATNGTP-ELQ-------N 238 (297)
T ss_dssp BCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHHHHHHCSC-CCS-------C
T ss_pred cCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH------HHHHHHHhCCCC-CCC-------C
Confidence 23456899999999999999999999999999999999999999743221 111111211111 110 1
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 435 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 435 ~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+......+.+++.+||+.||++|||++|+++
T Consensus 239 ~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 239 PEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1122346789999999999999999999976
No 26
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=3.5e-44 Score=351.10 Aligned_cols=280 Identities=36% Similarity=0.584 Sum_probs=227.5
Q ss_pred cccChhHHHHHHHhhh--------cccCCCCceEEEEEEecCCcEEEEEEecCCC----chhHHHHHHHHHHHhcCCCCC
Q 010131 185 YFIPLPELEEATNNFC--------KKIGKGSFGSVYYGKMKDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRN 252 (517)
Q Consensus 185 ~~~~~~~l~~~~~~~~--------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~n 252 (517)
..+++.++..++.+|. +.||+|+||.||+|... ++.||||++.... ....+.+.+|+.++++++|||
T Consensus 13 ~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 91 (307)
T 2nru_A 13 HSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHEN 91 (307)
T ss_dssp EECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESS-SCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTT
T ss_pred CcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEEC-CceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCC
Confidence 4567889999998874 56999999999999974 8899999986532 234577999999999999999
Q ss_pred ccccceeeecCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC
Q 010131 253 LVPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 332 (517)
Q Consensus 253 iv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~ 332 (517)
|+++++++.+.+..++||||+++++|.+++........+++..++.++.|++.||+|||+ .+++||||||+||+++.
T Consensus 92 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~ 168 (307)
T 2nru_A 92 LVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDE 168 (307)
T ss_dssp BCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECT
T ss_pred eEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecCCCCHHHEEEcC
Confidence 999999999999999999999999999999765455679999999999999999999999 99999999999999999
Q ss_pred CCcEEEccccCccccCCCCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHH
Q 010131 333 NMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 411 (517)
Q Consensus 333 ~~~~kl~Dfg~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~ 411 (517)
++.+||+|||++......... ......|++.|+|||.+.+ .++.++||||||+++|+|++|+.||........ ...
T Consensus 169 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~ 245 (307)
T 2nru_A 169 AFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHREPQL--LLD 245 (307)
T ss_dssp TCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB--TTH
T ss_pred CCcEEEeecccccccccccccccccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCcchHH--HHH
Confidence 999999999999876543222 2234568999999998875 588999999999999999999999975443221 112
Q ss_pred HHHHHHh-cCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 412 WARSMIK-KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 412 ~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
+...... ...+.+.+++.+ ..........+.+++.+||+.||.+|||+++|++.|+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~ 306 (307)
T 2nru_A 246 IKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTA 306 (307)
T ss_dssp HHHHHHTTSCCHHHHSCSSC-SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC-
T ss_pred HHHHhhhhhhhhhhhccccc-cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhc
Confidence 2222111 122333444433 34466777889999999999999999999999999998753
No 27
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2.7e-45 Score=361.45 Aligned_cols=267 Identities=25% Similarity=0.339 Sum_probs=208.5
Q ss_pred HHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCC----eeEEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH----QRILVY 270 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----~~~lv~ 270 (517)
..|++.+.||+|+||+||+|++. ++.||||++... ......+..|+.++++++||||+++++++.... ..++||
T Consensus 24 ~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~ 101 (322)
T 3soc_A 24 MPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQ-DKQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLIT 101 (322)
T ss_dssp EEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGG-GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred hhchhhheecccCceEEEEEEEC-CCEEEEEEeecC-chHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEE
Confidence 34567889999999999999887 899999999643 233455667999999999999999999998754 369999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCC----------CcEecCCCCCCeEeCCCCcEEEcc
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP----------GIIHRDVKSSNILLDINMRAKVSD 340 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~----------~ivH~dlk~~Nill~~~~~~kl~D 340 (517)
||+++|+|.+++.. ..+++..++.++.|++.||+|||+ . +|+||||||+|||++.++.+||+|
T Consensus 102 e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~al~~LH~---~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 102 AFHEKGSLSDFLKA----NVVSWNELCHIAETMARGLAYLHE---DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp ECCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHTC---CEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred ecCCCCCHHHHHHh----cCCCHHHHHHHHHHHHHHHHHHHh---hccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999974 459999999999999999999998 7 999999999999999999999999
Q ss_pred ccCccccCCCCcc-cccccccCCCCcCCCccCC-----CCCCccceehhHHHHHHHHHhCCCCCCCCCccccc-------
Q 010131 341 FGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL------- 407 (517)
Q Consensus 341 fg~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~------- 407 (517)
||+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+||+.||.........
T Consensus 175 Fg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~ 254 (322)
T 3soc_A 175 FGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIG 254 (322)
T ss_dssp CTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHC
T ss_pred CCcccccccccCccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhc
Confidence 9999876543322 2233568999999999876 35667899999999999999999999754332111
Q ss_pred ---cHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 408 ---NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 408 ---~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
....+... .........+.... ........+.+++.+||+.||++|||++||++.|+++.+..
T Consensus 255 ~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l~~~~ 320 (322)
T 3soc_A 255 QHPSLEDMQEV-VVHKKKRPVLRDYW---QKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQMQRLT 320 (322)
T ss_dssp SSCCHHHHHHH-HTTSCCCCCCCGGG---GSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred cCCchhhhhhh-hhcccCCCCccccc---cccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHh
Confidence 11111111 11111111111111 12245567999999999999999999999999999987653
No 28
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2e-45 Score=362.75 Aligned_cols=264 Identities=27% Similarity=0.486 Sum_probs=212.2
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec----CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCe
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 265 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 265 (517)
++...+|.+.+.||+|+||.||+|.+. .+..||||++..... ...+.+.+|+.++++++||||+++++++.+.+.
T Consensus 45 ~~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 124 (325)
T 3kul_A 45 EIEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRL 124 (325)
T ss_dssp BCCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGC
T ss_pred ccChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCc
Confidence 344556778899999999999999885 355699999976533 345679999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcc
Q 010131 266 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 345 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 345 (517)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~ 199 (325)
T 3kul_A 125 AMIVTEYMENGSLDTFLRTH--DGQFTIMQLVGMLRGVGAGMRYLSD---LGYVHRDLAARNVLVDSNLVCKVSDFGLSR 199 (325)
T ss_dssp CEEEEECCTTCBHHHHHHTT--TTCSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCSSCE
T ss_pred cEEEeeCCCCCcHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEECCCCCEEECCCCccc
Confidence 99999999999999999642 4579999999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCcc--cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 346 QAEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 346 ~~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
........ ......+|+.|+|||++.+..++.++||||||+++|||++ |+.||...... +.. ..+..+..
T Consensus 200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~------~~~-~~~~~~~~ 272 (325)
T 3kul_A 200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNR------DVI-SSVEEGYR 272 (325)
T ss_dssp ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHH------HHH-HHHHTTCC
T ss_pred ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHH------HHH-HHHHcCCC
Confidence 76543221 1222345778999999998899999999999999999999 99999633221 111 12222211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
. ..+...+..+.+++.+||+.||++|||++||++.|+.+.....
T Consensus 273 ~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~~ 316 (325)
T 3kul_A 273 L---------PAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSPE 316 (325)
T ss_dssp C---------CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSCC
T ss_pred C---------CCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCcc
Confidence 1 1111233468899999999999999999999999999886543
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=3.5e-45 Score=351.24 Aligned_cols=257 Identities=28% Similarity=0.466 Sum_probs=212.5
Q ss_pred HHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
..|++.+.||+|+||.||+|.+.+++.||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 3566789999999999999999889999999997543 334679999999999999999999999999999999999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCccc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 354 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 354 (517)
+++|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++..........
T Consensus 89 ~~~L~~~l~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 163 (269)
T 4hcu_A 89 HGCLSDYLRT--QRGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTS 163 (269)
T ss_dssp TCBHHHHHHT--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHS
T ss_pred CCcHHHHHHh--cCcccCHHHHHHHHHHHHHHHHHHHh---CCeecCCcchheEEEcCCCCEEecccccccccccccccc
Confidence 9999999974 24568999999999999999999999 999999999999999999999999999998765443333
Q ss_pred ccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCC
Q 010131 355 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 433 (517)
Q Consensus 355 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 433 (517)
.....+++.|+|||.+.+..++.++||||+|+++|+|++ |+.||...... +... .+..+.. ...+
T Consensus 164 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~------~~~~-~~~~~~~--~~~~----- 229 (269)
T 4hcu_A 164 STGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNS------EVVE-DISTGFR--LYKP----- 229 (269)
T ss_dssp TTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHHH-HHHTTCC--CCCC-----
T ss_pred ccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHH------HHHH-HHhcCcc--CCCC-----
Confidence 334456778999999998899999999999999999999 99999743221 1111 1222111 0111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 434 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 434 ~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
......+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 230 --~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 230 --RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp --TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred --CcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 11234688999999999999999999999999998763
No 30
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2e-45 Score=352.62 Aligned_cols=259 Identities=28% Similarity=0.457 Sum_probs=212.9
Q ss_pred HHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
...|.+.+.||+|+||.||+|.++++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 44567789999999999999999988899999997543 33567899999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcc
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 353 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 353 (517)
++++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.........
T Consensus 86 ~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~ 160 (268)
T 3sxs_A 86 SNGCLLNYLRSH--GKGLEPSQLLEMCYDVCEGMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYV 160 (268)
T ss_dssp TTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEE
T ss_pred CCCcHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCcceEEECCCCCEEEccCccceecchhhhh
Confidence 999999999753 3468999999999999999999999 99999999999999999999999999999876554433
Q ss_pred cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 354 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
......+++.|+|||.+.+..++.++||||||+++|+|+| |+.||...... +.... +..+.. ...+.
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~~~~~-~~~~~~--~~~~~--- 228 (268)
T 3sxs_A 161 SSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS------EVVLK-VSQGHR--LYRPH--- 228 (268)
T ss_dssp ECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHHHH-HHTTCC--CCCCT---
T ss_pred cccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH------HHHHH-HHcCCC--CCCCC---
Confidence 3344456778999999998889999999999999999999 99999743321 11111 221111 01111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.....+.+++.+||+.||++|||++|+++.|+.+.+..
T Consensus 229 ----~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~~ 266 (268)
T 3sxs_A 229 ----LASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREKD 266 (268)
T ss_dssp ----TSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC--
T ss_pred ----cChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhcc
Confidence 11236889999999999999999999999999887654
No 31
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6e-44 Score=351.56 Aligned_cols=257 Identities=25% Similarity=0.392 Sum_probs=211.2
Q ss_pred cChhHHHHHHHh------------hhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCc
Q 010131 187 IPLPELEEATNN------------FCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL 253 (517)
Q Consensus 187 ~~~~~l~~~~~~------------~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni 253 (517)
++..++..++.. ..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni 104 (321)
T 2c30_A 25 VTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNV 104 (321)
T ss_dssp CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTB
T ss_pred CcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCc
Confidence 456676666543 3568999999999999987 799999999987666667889999999999999999
Q ss_pred cccceeeecCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC
Q 010131 254 VPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 333 (517)
Q Consensus 254 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~ 333 (517)
+++++++...+..++||||+++++|.+++. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 105 v~~~~~~~~~~~~~lv~e~~~~~~L~~~l~----~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~ 177 (321)
T 2c30_A 105 VEMYKSYLVGEELWVLMEFLQGGALTDIVS----QVRLNEEQIATVCEAVLQALAYLHA---QGVIHRDIKSDSILLTLD 177 (321)
T ss_dssp CCEEEEEEETTEEEEEECCCCSCBHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTT
T ss_pred ceEEEEEEECCEEEEEEecCCCCCHHHHHH----hcCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCC
Confidence 999999999999999999999999999986 4569999999999999999999999 999999999999999999
Q ss_pred CcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHH
Q 010131 334 MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWA 413 (517)
Q Consensus 334 ~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~ 413 (517)
+.+||+|||++......... .....||+.|+|||++.+..++.++||||||+++|||++|+.||..... .+..
T Consensus 178 ~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~------~~~~ 250 (321)
T 2c30_A 178 GRVKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP------VQAM 250 (321)
T ss_dssp CCEEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHH
T ss_pred CcEEEeeeeeeeecccCccc-cccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHH
Confidence 99999999999876543322 2345689999999999999999999999999999999999999974321 1111
Q ss_pred HHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 414 RSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 414 ~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. .+.......... .......+.+++.+||+.||++|||++|+++
T Consensus 251 ~-~~~~~~~~~~~~-------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 251 K-RLRDSPPPKLKN-------SHKVSPVLRDFLERMLVRDPQERATAQELLD 294 (321)
T ss_dssp H-HHHHSSCCCCTT-------GGGSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred H-HHhcCCCCCcCc-------cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1 122221111111 1112336789999999999999999999986
No 32
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.3e-44 Score=359.05 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=195.8
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
.|++.+.||+|+||+||+|.+. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 11 ~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~ 90 (347)
T 3zgw_A 11 YYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYC 90 (347)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred CeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence 4567899999999999999875 799999999976432 33457889999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcc
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 353 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 353 (517)
++|+|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 91 ~gg~L~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 164 (347)
T 3zgw_A 91 PGGELFDYIIS---QDRLSEEETRVVFRQIVSAVAYVHS---QGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDY 164 (347)
T ss_dssp TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC-------
T ss_pred CCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCc
Confidence 99999999974 4579999999999999999999999 99999999999999999999999999999876544333
Q ss_pred cccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 354 ISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
......||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...+ ..+.... +..+... +
T Consensus 165 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~------~~~~~~~-i~~~~~~------~-- 229 (347)
T 3zgw_A 165 HLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN------VMALYKK-IMRGKYD------V-- 229 (347)
T ss_dssp -------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS------HHHHHHH-HHHTCCC------C--
T ss_pred cccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHH-HHcCCCC------C--
Confidence 3445568999999999988775 889999999999999999999997432 1222222 2222211 0
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
+......+.+++.+||+.||++|||++|+++.
T Consensus 230 --p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 230 --PKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred --CCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 11112357789999999999999999999873
No 33
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.2e-44 Score=352.18 Aligned_cols=264 Identities=27% Similarity=0.411 Sum_probs=208.6
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 270 (517)
..|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 35667899999999999999875 68999999985432 233467899999999999999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 91 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 164 (294)
T 4eqm_A 91 EYIEGPTLSEYIES---HGPLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSET 164 (294)
T ss_dssp ECCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---
T ss_pred eCCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEEeCCCccccccc
Confidence 99999999999974 4579999999999999999999999 99999999999999999999999999999876554
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
.........||+.|+|||.+.+..++.++||||||+++|+|+||+.||..... .......+... .... ...
T Consensus 165 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~-~~~~-~~~- 235 (294)
T 4eqm_A 165 SLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA------VSIAIKHIQDS-VPNV-TTD- 235 (294)
T ss_dssp ----------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCH------HHHHHHHHSSC-CCCH-HHH-
T ss_pred cccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhhcc-CCCc-chh-
Confidence 43334445689999999999999999999999999999999999999974322 11122222211 1110 000
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHHHhhhhhhcC
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIEKG 476 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RP-s~~evl~~L~~~~~~~~~ 476 (517)
.....+..+.+++.+||+.||++|| +++++.+.|+.+......
T Consensus 236 ---~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~~~ 279 (294)
T 4eqm_A 236 ---VRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHENRA 279 (294)
T ss_dssp ---SCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSSST
T ss_pred ---cccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhccC
Confidence 1112234688999999999999999 999999999987765443
No 34
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.1e-44 Score=350.30 Aligned_cols=260 Identities=28% Similarity=0.470 Sum_probs=211.2
Q ss_pred HHHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
....|.+.+.||+|+||.||+|.+.++..||+|++.... ...+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 22 DPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp CGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred CHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC-CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 344567789999999999999999988899999997543 2346789999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+++++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 101 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 175 (283)
T 3gen_A 101 MANGCLLNYLREM--RHRFQTQQLLEMCKDVCEAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEY 175 (283)
T ss_dssp CTTCBHHHHHHCG--GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHH
T ss_pred cCCCcHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCccceEEEcCCCCEEEcccccccccccccc
Confidence 9999999999752 3569999999999999999999999 9999999999999999999999999999987654433
Q ss_pred ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 353 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.......+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||...... +.. ..+..+... ..+
T Consensus 176 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~------~~~-~~~~~~~~~--~~~--- 243 (283)
T 3gen_A 176 TSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNS------ETA-EHIAQGLRL--YRP--- 243 (283)
T ss_dssp HSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHH------HHH-HHHHTTCCC--CCC---
T ss_pred ccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChh------HHH-HHHhcccCC--CCC---
Confidence 33333446788999999998889999999999999999998 99999743321 111 122222110 001
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
......+.+++.+||+.||++|||++|+++.|+++.+.+
T Consensus 244 ----~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~~e 282 (283)
T 3gen_A 244 ----HLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMDEE 282 (283)
T ss_dssp ----TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred ----CcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhhcc
Confidence 111246889999999999999999999999999988654
No 35
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2.3e-44 Score=351.29 Aligned_cols=260 Identities=25% Similarity=0.381 Sum_probs=201.8
Q ss_pred HHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhc--CCCCCccccceeeec----CCeeEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEE----EHQRIL 268 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~----~~~~~l 268 (517)
..|.+.+.||+|+||+||+|++ +++.||||++... ....+..|.+++.. ++||||+++++++.. ....++
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~l 83 (301)
T 3q4u_A 8 RDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWL 83 (301)
T ss_dssp GGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred CcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEE
Confidence 3566789999999999999998 4899999998643 34556677777766 799999999998654 345789
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHh--------cCCCCCcEecCCCCCCeEeCCCCcEEEcc
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSD 340 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~kl~D 340 (517)
||||+++|+|.++++ ...+++..++.++.|++.||+||| + ++|+||||||+|||++.++.+||+|
T Consensus 84 v~e~~~~g~L~~~l~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nill~~~~~~kl~D 156 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQ----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGK---PAIAHRDLKSKNILVKKNGQCCIAD 156 (301)
T ss_dssp EECCCTTCBHHHHHT----TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCB---CEEECSCCCGGGEEECTTSCEEECC
T ss_pred ehhhccCCCHHHHHh----hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCC---CCeecCCCChHhEEEcCCCCEEEee
Confidence 999999999999995 457999999999999999999999 7 9999999999999999999999999
Q ss_pred ccCccccCCCCccc---ccccccCCCCcCCCccCCC------CCCccceehhHHHHHHHHHhC----------CCCCCCC
Q 010131 341 FGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVE 401 (517)
Q Consensus 341 fg~a~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg----------~~p~~~~ 401 (517)
||+++......... .....||+.|+|||.+.+. .++.++|||||||++|||+|| +.||...
T Consensus 157 fg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~ 236 (301)
T 3q4u_A 157 LGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDV 236 (301)
T ss_dssp CTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred CCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccccc
Confidence 99997654433221 2234689999999999876 556799999999999999999 8888633
Q ss_pred CccccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 010131 402 DFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 470 (517)
Q Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 470 (517)
... ...................... ..........+.+++.+||+.||++|||++||++.|+++
T Consensus 237 ~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 237 VPN-DPSFEDMRKVVCVDQQRPNIPN----RWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp SCS-SCCHHHHHHHHTTSCCCCCCCG----GGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred CCC-CcchhhhhHHHhccCCCCCCCh----hhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 222 1222222111111111111110 112234667899999999999999999999999999875
No 36
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=1.3e-44 Score=352.00 Aligned_cols=267 Identities=28% Similarity=0.451 Sum_probs=208.7
Q ss_pred HHHHHhhhcccCCCCceEEEEEEe-----cCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeec--CCe
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE--EHQ 265 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--~~~ 265 (517)
....|++.+.||+|+||+||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. ...
T Consensus 8 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 8 EERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred CHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 345677789999999999999984 2588999999987666667889999999999999999999999855 356
Q ss_pred eEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcc
Q 010131 266 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 345 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 345 (517)
.++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~ 162 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTK 162 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHC--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCSCC
T ss_pred eEEEEEeCCCCCHHHHHHhc--ccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHhhEEEcCCCeEEEccCcccc
Confidence 89999999999999999753 3459999999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCc--ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCcc---------ccccHHHHHH
Q 010131 346 QAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWAR 414 (517)
Q Consensus 346 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~---------~~~~~~~~~~ 414 (517)
....... .......++..|+|||.+.+..++.++||||||+++|||+||..|+...... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (295)
T 3ugc_A 163 VLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI 242 (295)
T ss_dssp -------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred cccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHH
Confidence 7654322 1222334677899999999889999999999999999999999998632211 0011111122
Q ss_pred HHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 415 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 415 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
..+..+... ..+...+..+.+++.+||+.||++|||++|+++.|+++.+.
T Consensus 243 ~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~~ 292 (295)
T 3ugc_A 243 ELLKNNGRL---------PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDN 292 (295)
T ss_dssp HHHHTTCCC---------CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred HHHhccCcC---------CCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHh
Confidence 222222111 11122345788999999999999999999999999998753
No 37
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=4e-44 Score=361.55 Aligned_cols=273 Identities=24% Similarity=0.423 Sum_probs=218.5
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec--------CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcC-CCCCccccceee
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYC 260 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~ 260 (517)
++....+.+.+.||+|+||+||+|.+. .+..||||++..... ...+.+.+|+++++++ +||||+++++++
T Consensus 65 ~i~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~ 144 (382)
T 3tt0_A 65 ELPRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGAC 144 (382)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ccchhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeee
Confidence 344456777899999999999999863 246799999976543 3457799999999999 899999999999
Q ss_pred ecCCeeEEEEEecCCCCHHhHhhccCC-------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCC
Q 010131 261 EEEHQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSN 327 (517)
Q Consensus 261 ~~~~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~N 327 (517)
.+.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+||||||+|
T Consensus 145 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~N 221 (382)
T 3tt0_A 145 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLAS---KKCIHRDLAARN 221 (382)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGG
T ss_pred ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCcce
Confidence 999999999999999999999975431 2469999999999999999999999 999999999999
Q ss_pred eEeCCCCcEEEccccCccccCCCCc-ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccc
Q 010131 328 ILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGA 405 (517)
Q Consensus 328 ill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~ 405 (517)
||++.++.+||+|||+++....... .......+|+.|+|||++.+..++.++|||||||++|||++ |..||...+.
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~-- 299 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-- 299 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--
T ss_pred EEEcCCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999987654322 22233456889999999999999999999999999999999 9999974322
Q ss_pred cccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcCCCCCcc
Q 010131 406 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGDQKFS 482 (517)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~~~~~ 482 (517)
.+ +...+..+..... .......+.+++.+||+.||++|||++||++.|+++.......+....
T Consensus 300 ----~~-~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~~~~~~~~ 362 (382)
T 3tt0_A 300 ----EE-LFKLLKEGHRMDK---------PSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVALTSNQEMGYY 362 (382)
T ss_dssp ----HH-HHHHHHTTCCCCC---------CSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHSCSCC----
T ss_pred ----HH-HHHHHHcCCCCCC---------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHhcCCCCCC
Confidence 11 2222322221111 111234688999999999999999999999999999988766655543
No 38
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=5.8e-44 Score=352.21 Aligned_cols=245 Identities=25% Similarity=0.410 Sum_probs=203.3
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
.|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++||||
T Consensus 16 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~ 95 (328)
T 3fe3_A 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEY 95 (328)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred CEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEEC
Confidence 3566789999999999999874 79999999996542 33456788999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 96 ~~~~~L~~~l~~---~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 169 (328)
T 3fe3_A 96 ASGGEVFDYLVA---HGRMKEKEARSKFRQIVSAVQYCHQ---KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK 169 (328)
T ss_dssp CTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG
T ss_pred CCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc
Confidence 999999999974 4569999999999999999999999 9999999999999999999999999999987654322
Q ss_pred ccccccccCCCCcCCCccCCCCCC-ccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 353 HISSVARGTVGYLDPEYYGNQQLT-EKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.....||+.|+|||++.+..+. .++||||+||++|+|++|+.||...+. .+... .+..+... +
T Consensus 170 --~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~-~i~~~~~~------~- 233 (328)
T 3fe3_A 170 --LDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL------KELRE-RVLRGKYR------I- 233 (328)
T ss_dssp --GGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH-HHHHCCCC------C-
T ss_pred --cccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH------HHHHH-HHHhCCCC------C-
Confidence 3445689999999999887765 799999999999999999999974332 22222 22222211 0
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+......+.+++.+||+.||.+|||++|+++
T Consensus 234 ---p~~~s~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 234 ---PFYMSTDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp ---CTTSCHHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred ---CCCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1112235789999999999999999999976
No 39
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=4.8e-45 Score=366.63 Aligned_cols=261 Identities=26% Similarity=0.472 Sum_probs=200.7
Q ss_pred HHHHHhhhcccCCCCceEEEEEEec----CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeE
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 267 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 267 (517)
....+.+.+.||+|+||.||+|++. ++..||||+++.... ...+.|.+|+.++++++||||+++++++.+.+..+
T Consensus 43 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 122 (373)
T 2qol_A 43 DATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVM 122 (373)
T ss_dssp CGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCE
T ss_pred CHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceE
Confidence 3445667889999999999999875 577899999976533 34567999999999999999999999999999999
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
+||||+++|+|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++..
T Consensus 123 lv~e~~~~~sL~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 197 (373)
T 2qol_A 123 IVTEYMENGSLDSFLRK--HDAQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILINSNLVCKVSDFGLGRVL 197 (373)
T ss_dssp EEEECCTTCBHHHHHHT--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC------
T ss_pred EEEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCcceEEEcCCCCEEECcCcccccc
Confidence 99999999999999974 24579999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCccc--ccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 348 EEDLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 348 ~~~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
....... .....++..|+|||++.+..++.++|||||||++|||++ |+.||...... + +...+..+..
T Consensus 198 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~------~-~~~~i~~~~~-- 268 (373)
T 2qol_A 198 EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQ------D-VIKAVDEGYR-- 268 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHH------H-HHHHHHTTEE--
T ss_pred ccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHcCCC--
Confidence 5432211 112235678999999998899999999999999999998 99999733221 1 1122222211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.......+..+.+++.+||+.||++||++.||++.|+.++...
T Consensus 269 -------~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~~~~ 311 (373)
T 2qol_A 269 -------LPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRNP 311 (373)
T ss_dssp -------CCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCG
T ss_pred -------CCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHHhCc
Confidence 0111123446889999999999999999999999999987643
No 40
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.9e-43 Score=346.58 Aligned_cols=271 Identities=22% Similarity=0.312 Sum_probs=214.6
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCC--eeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 271 (517)
.|.+.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.... ..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 89 (319)
T 4euu_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (319)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEE
T ss_pred CEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEe
Confidence 3556789999999999999887 58999999997543 334677889999999999999999999987655 7799999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe----CCCCcEEEccccCcccc
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQA 347 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~a~~~ 347 (517)
|+++++|.+++........+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++..
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~ 166 (319)
T 4euu_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (319)
T ss_dssp CCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEEC
T ss_pred CCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEeccCCCCceEEEccCCCceec
Confidence 99999999999865545559999999999999999999999 999999999999999 78888999999999876
Q ss_pred CCCCcccccccccCCCCcCCCccC--------CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc
Q 010131 348 EEDLTHISSVARGTVGYLDPEYYG--------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 419 (517)
Q Consensus 348 ~~~~~~~~~~~~g~~~y~aPE~~~--------~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 419 (517)
..... .....||+.|+|||++. +..++.++|||||||++|||+||+.||........ ..+.+......
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~ 242 (319)
T 4euu_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITG 242 (319)
T ss_dssp CTTCC--BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGG--CHHHHHHHHHH
T ss_pred CCCCc--eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccch--hHHHHHHHhcC
Confidence 55432 22345899999999875 57889999999999999999999999964333221 12222222222
Q ss_pred CC---ccccc-----------CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 420 GD---VISIV-----------DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 420 ~~---~~~~~-----------d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
.. ...+. +..............+.+++.+||+.||++|||++|+++..++....
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~~~~ 310 (319)
T 4euu_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHR 310 (319)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHTC-
T ss_pred CCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHHhhc
Confidence 11 00000 00111234567778899999999999999999999999998876544
No 41
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=7.9e-45 Score=365.96 Aligned_cols=259 Identities=29% Similarity=0.437 Sum_probs=211.0
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
...+.+.+.||+|+||.||+|.+. +++.||||+++.... ...+.|.+|++++++++||||+++++++.+.+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 345667899999999999999987 789999999875533 334578899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++... ...+++..++.++.|++.||+|||+ ++++||||||+|||++.++.+||+|||+++......
T Consensus 193 ~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 193 LVQGGDFLTFLRTE--GARLRVKTLLQMVGDAAAGMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp CCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred cCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 99999999999742 3468999999999999999999999 999999999999999999999999999998654432
Q ss_pred cccc-cccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 352 THIS-SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 352 ~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
.... ....++..|+|||.+.+..++.++|||||||++|||+| |..||...... .+...+..+.....
T Consensus 268 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~-------~~~~~~~~~~~~~~---- 336 (377)
T 3cbl_A 268 YAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQ-------QTREFVEKGGRLPC---- 336 (377)
T ss_dssp EECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHH-------HHHHHHHTTCCCCC----
T ss_pred eeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH-------HHHHHHHcCCCCCC----
Confidence 2111 12235678999999998899999999999999999998 99999743221 12222332221111
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
+...+..+.+++.+||+.||++|||+++|++.|+++.+.
T Consensus 337 -----~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~~~ 375 (377)
T 3cbl_A 337 -----PELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIRKR 375 (377)
T ss_dssp -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHhh
Confidence 112234688999999999999999999999999988754
No 42
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=3.2e-43 Score=342.66 Aligned_cols=263 Identities=15% Similarity=0.190 Sum_probs=211.5
Q ss_pred HHhhhcccCCCCceEEEEEEe-cCCcEEEEEEecCCCchhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEEEec
Q 010131 196 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
.|.+.+.||+|+||.||+|.. .+++.||||++.... ..+.+.+|+.+++++ +|+|++++++++.+....++||||+
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 88 (298)
T 1csn_A 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL 88 (298)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec
Confidence 456778999999999999986 478999999986432 234578899999999 7999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc-----EEEccccCccccC
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQAE 348 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~a~~~~ 348 (517)
+++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++....
T Consensus 89 -~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 89 -GPSLEDLLDLC--GRKFSVKTVAMAAKQMLARVQSIHE---KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred -CCCHHHHHHHh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99999999753 4569999999999999999999999 99999999999999987776 9999999998765
Q ss_pred CCCcc------cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 349 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 349 ~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
..... ......||+.|+|||.+.+..++.++||||||+++|||++|+.||..............+.........
T Consensus 163 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 242 (298)
T 1csn_A 163 DPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPL 242 (298)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCH
T ss_pred cccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccH
Confidence 43221 123456899999999999999999999999999999999999999854433222222222211111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
... .. ..+..+.+++.+||+.||++|||+++|++.|+++.+...
T Consensus 243 ~~~-----~~----~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~~~~~ 286 (298)
T 1csn_A 243 REL-----CA----GFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVLERLN 286 (298)
T ss_dssp HHH-----TT----TSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred HHH-----Hh----hCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhcC
Confidence 111 01 123468899999999999999999999999999987544
No 43
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=9.5e-45 Score=377.84 Aligned_cols=261 Identities=29% Similarity=0.469 Sum_probs=215.5
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEecC-CcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEE
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
++....+.+.++||+|+||.||+|.+.. +..||||+++... ...+.|.+|+.++++++||||++++++|.+.+..++|
T Consensus 216 ~~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv 294 (495)
T 1opk_A 216 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294 (495)
T ss_dssp BCCGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEE
T ss_pred ccCHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEE
Confidence 3445567778999999999999999874 8899999997543 3467899999999999999999999999999999999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|||+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 295 ~E~~~~g~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 370 (495)
T 1opk_A 295 TEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRNLAARNCLVGENHLVKVADFGLSRLMTG 370 (495)
T ss_dssp EECCTTCBHHHHHHHS-CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECGGGCEEECCTTCEECCTT
T ss_pred EEccCCCCHHHHHHhc-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChhhEEECCCCcEEEeecccceeccC
Confidence 9999999999999754 34568999999999999999999999 9999999999999999999999999999987654
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 428 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 428 (517)
..........++..|+|||.+.+..++.++|||||||++|||+| |+.||...+.. ...+ .+..+...
T Consensus 371 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~---~~~~----~~~~~~~~----- 438 (495)
T 1opk_A 371 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLS---QVYE----LLEKDYRM----- 438 (495)
T ss_dssp CCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGG---GHHH----HHHTTCCC-----
T ss_pred CceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCHH---HHHH----HHHcCCCC-----
Confidence 43333333446778999999998899999999999999999999 99999744322 1222 22222111
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 429 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 429 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
..+...+..+.+++.+||+.||++|||+.||++.|+.+..
T Consensus 439 ----~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 439 ----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred ----CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 1112233468899999999999999999999999998753
No 44
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=9.7e-45 Score=374.18 Aligned_cols=261 Identities=24% Similarity=0.417 Sum_probs=212.5
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEE
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 270 (517)
++....+.+.+.||+|+||.||+|.++++..||||+++... ...+.|.+|+.++++++||||+++++++. .+..++||
T Consensus 184 ~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~ 261 (454)
T 1qcf_A 184 EIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIIT 261 (454)
T ss_dssp BCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEE
T ss_pred eechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEE
Confidence 34445667789999999999999999888999999997643 45678999999999999999999999987 56789999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++|+|.+++.... ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 262 e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDE-GSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp CCCTTCBHHHHHHSHH-HHTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred eecCCCcHHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 9999999999997431 2368899999999999999999999 99999999999999999999999999999876543
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
.........++..|+|||.+.+..++.++|||||||++|||+| |+.||...+.. +.. ..+..+....
T Consensus 338 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~------~~~-~~i~~~~~~~----- 405 (454)
T 1qcf_A 338 EYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP------EVI-RALERGYRMP----- 405 (454)
T ss_dssp HHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHH------HHH-HHHHHTCCCC-----
T ss_pred ceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHH------HHH-HHHHcCCCCC-----
Confidence 2222233346778999999988899999999999999999999 99999743221 111 1222221111
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
.+...+..+.+++.+||+.||++|||+++|++.|+++...
T Consensus 406 ----~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 406 ----RPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp ----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred ----CCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 1112334688999999999999999999999999987654
No 45
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=3.4e-43 Score=347.74 Aligned_cols=261 Identities=19% Similarity=0.232 Sum_probs=209.5
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEEEec
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
.|.+.+.||+|+||.||+|... +|+.||||++..... .+.+.+|+.+++++ +||||+++++++...+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (330)
T 2izr_A 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL 87 (330)
T ss_dssp TEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC
T ss_pred CeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC
Confidence 3556789999999999999864 789999999875432 24688999999999 9999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc-----EEEccccCccccC
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-----AKVSDFGLSRQAE 348 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~-----~kl~Dfg~a~~~~ 348 (517)
+++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++. +||+|||+++...
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 88 -GPSLEDLFDLC--DRTFSLKTVLMIAIQLISRMEYVHS---KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred -CCCHHHHHHHc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99999999753 4679999999999999999999999 99999999999999999887 9999999998764
Q ss_pred CCCcc------cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 349 EDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 349 ~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||..............+.........
T Consensus 162 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 241 (330)
T 2izr_A 162 DPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPI 241 (330)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCH
T ss_pred cCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCH
Confidence 43221 123456899999999999999999999999999999999999999854433222222211111110000
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
..+... .+ .+.+++.+|++.||.+||++++|++.|+++....
T Consensus 242 -----~~~~~~----~p-~~~~li~~~l~~~p~~RP~~~~l~~~l~~~~~~~ 283 (330)
T 2izr_A 242 -----EVLCEN----FP-EMATYLRYVRRLDFFEKPDYDYLRKLFTDLFDRK 283 (330)
T ss_dssp -----HHHTTT----CH-HHHHHHHHHHHCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred -----HHHhcc----Ch-HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 000000 12 6889999999999999999999999999887654
No 46
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=6.2e-44 Score=344.81 Aligned_cols=260 Identities=25% Similarity=0.404 Sum_probs=199.4
Q ss_pred HHHHhhhcccCCCCceEEEEEEecC----CcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 268 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 268 (517)
...|++.+.||+|+||.||+|.+.. +..||+|++..... ...+.+.+|+.++++++||||+++++++. ++..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 3466778999999999999998753 45799999876433 34567999999999999999999999985 456899
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 93 v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVR--KYSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEECCTTEEHHHHHHHT--TTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEecCCCCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHEEECCCCCEEECccccccccC
Confidence 99999999999999753 4568999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccC
Q 010131 349 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 427 (517)
Q Consensus 349 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 427 (517)
...........+++.|+|||.+.+..++.++||||||+++|||++ |..||...... .... .+..+....
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~---~~~~----~i~~~~~~~--- 237 (281)
T 1mp8_A 168 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN---DVIG----RIENGERLP--- 237 (281)
T ss_dssp -----------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG---GHHH----HHHTTCCCC---
T ss_pred cccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH---HHHH----HHHcCCCCC---
Confidence 543333333446788999999988889999999999999999997 99999744322 1111 122221111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 428 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 428 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
.+...+..+.+++.+||+.||++|||+.|+++.|+++.+.+.
T Consensus 238 ------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~ 279 (281)
T 1mp8_A 238 ------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEEK 279 (281)
T ss_dssp ------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred ------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhc
Confidence 111223468899999999999999999999999999887643
No 47
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=3.9e-43 Score=347.32 Aligned_cols=247 Identities=23% Similarity=0.346 Sum_probs=203.3
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCC---CchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|++.+.||+|+||.||+|+.. +|+.||+|++.+. .......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E 85 (337)
T 1o6l_A 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVME 85 (337)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEe
Confidence 4566789999999999999876 6899999999753 22345678899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 159 (337)
T 1o6l_A 86 YANGGELFFHLSR---ERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG 159 (337)
T ss_dssp CCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT
T ss_pred CCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC
Confidence 9999999999874 4578999999999999999999999 999999999999999999999999999998643322
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......... +.. .+
T Consensus 160 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~-~~~------~~- 224 (337)
T 1o6l_A 160 A-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ERLFELILM-EEI------RF- 224 (337)
T ss_dssp C-CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-CCC------CC-
T ss_pred C-cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH------HHHHHHHHc-CCC------CC-
Confidence 1 23345689999999999999999999999999999999999999974322 111222221 211 01
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 466 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~~ 466 (517)
+......+.+++.+||+.||++|| +++|+++.
T Consensus 225 ---p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 225 ---PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp ---CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred ---CCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 111223678999999999999999 89998763
No 48
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-43 Score=346.26 Aligned_cols=260 Identities=28% Similarity=0.478 Sum_probs=202.8
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 275 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 275 (517)
.+++.+.||+|+||.||+|.+. ++.||||++... ...+.+.+|++++++++||||+++++++.+ ..++||||+++
T Consensus 9 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~~ 83 (307)
T 2eva_A 9 EIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAEG 83 (307)
T ss_dssp GEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCTT
T ss_pred HeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCCC
Confidence 4566789999999999999986 789999998643 345789999999999999999999998874 47999999999
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc-EEEccccCccccCCCCccc
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR-AKVSDFGLSRQAEEDLTHI 354 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~-~kl~Dfg~a~~~~~~~~~~ 354 (517)
|+|.+++........+++..++.++.|+++||+|||+...++|+||||||+||+++.++. +||+|||++.......
T Consensus 84 ~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~--- 160 (307)
T 2eva_A 84 GSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM--- 160 (307)
T ss_dssp CBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-----------
T ss_pred CCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc---
Confidence 999999985433345789999999999999999999854468999999999999998886 7999999997654322
Q ss_pred ccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCC
Q 010131 355 SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 434 (517)
Q Consensus 355 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 434 (517)
....||+.|+|||.+.+..++.++||||||+++|||+||+.||...... ....... ...+..... ..
T Consensus 161 -~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~-~~~~~~~~~-----~~-- 227 (307)
T 2eva_A 161 -TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP----AFRIMWA-VHNGTRPPL-----IK-- 227 (307)
T ss_dssp -----CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSS----HHHHHHH-HHTTCCCCC-----BT--
T ss_pred -ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCcc----HHHHHHH-HhcCCCCCc-----cc--
Confidence 2235899999999999999999999999999999999999999733221 1111111 111211111 11
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcCCC
Q 010131 435 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGGD 478 (517)
Q Consensus 435 ~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~~ 478 (517)
..+..+.+++.+||+.||++|||++|+++.|+.+.......+
T Consensus 228 --~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~~~~ 269 (307)
T 2eva_A 228 --NLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGAD 269 (307)
T ss_dssp --TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHGGGCCCTT
T ss_pred --ccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhccCCC
Confidence 123468899999999999999999999999999887654433
No 49
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.1e-43 Score=346.55 Aligned_cols=268 Identities=24% Similarity=0.403 Sum_probs=209.6
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEe-----cCCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecC-
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE- 263 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~- 263 (517)
.+....|++.+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 17 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 96 (302)
T 4e5w_A 17 HFEKRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG 96 (302)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC--
T ss_pred hhhhhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCC
Confidence 33344567789999999999999984 368999999997543 33457899999999999999999999999876
Q ss_pred -CeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEcccc
Q 010131 264 -HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFG 342 (517)
Q Consensus 264 -~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 342 (517)
...++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||
T Consensus 97 ~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 97 GNGIKLIMEFLPSGSLKEYLPKN--KNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp -CCEEEEEECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CceEEEEEEeCCCCcHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHhhc---CCcccCCCchheEEEcCCCCEEECccc
Confidence 5689999999999999999643 4569999999999999999999999 999999999999999999999999999
Q ss_pred CccccCCCCc--ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCc--------cccccHHHH
Q 010131 343 LSRQAEEDLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF--------GAELNIVHW 412 (517)
Q Consensus 343 ~a~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~--------~~~~~~~~~ 412 (517)
++........ .......+|..|+|||.+.+..++.++||||||+++|+|+||+.|+..... .........
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 251 (302)
T 4e5w_A 172 LTKAIETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTR 251 (302)
T ss_dssp TCEECCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHH
T ss_pred ccccccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHH
Confidence 9987654432 223344578889999999988999999999999999999999998752210 011111111
Q ss_pred HHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 413 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 413 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
....+..+.... .+...+..+.+++.+||+.||.+|||++|+++.|+.+++
T Consensus 252 ~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll~ 302 (302)
T 4e5w_A 252 LVNTLKEGKRLP---------CPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALLK 302 (302)
T ss_dssp HHHHHHTTCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHC
T ss_pred HHHHHhccCCCC---------CCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhC
Confidence 222222221111 112233468899999999999999999999999998763
No 50
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=2.6e-44 Score=348.68 Aligned_cols=263 Identities=29% Similarity=0.462 Sum_probs=217.4
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEE
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
++....+.+.+.||+|+||.||+|.+. ++..||+|++... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 9 ~~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v 87 (288)
T 3kfa_A 9 EMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87 (288)
T ss_dssp BCCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEE
T ss_pred cccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEE
Confidence 334456677899999999999999887 4889999999754 34567899999999999999999999999999999999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|||+++++|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 88 ~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~ 163 (288)
T 3kfa_A 88 TEFMTYGNLLDYLREC-NRQEVSAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTG 163 (288)
T ss_dssp EECCTTEEHHHHHHHC-CTTTSCHHHHHHHHHHHHHHHHHHHH---HTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCS
T ss_pred EEcCCCCcHHHHHHhc-ccCCccHhHHHHHHHHHHHHHHHHHH---CCccCCCCCcceEEEcCCCCEEEccCccceeccC
Confidence 9999999999999754 34669999999999999999999999 9999999999999999999999999999987765
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 428 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 428 (517)
..........+++.|+|||.+.+..++.++||||||+++|+|++ |..||...+... ..+ .+......
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~---~~~----~~~~~~~~----- 231 (288)
T 3kfa_A 164 DTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQ---VYE----LLEKDYRM----- 231 (288)
T ss_dssp SSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HHHTTCCC-----
T ss_pred CccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH---HHH----HHhccCCC-----
Confidence 54444444557889999999988899999999999999999999 999997443321 111 12111110
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 429 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 429 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
......+..+.+++.+||+.||.+|||++|+++.|+.+....
T Consensus 232 ----~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~~~~~ 273 (288)
T 3kfa_A 232 ----ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQES 273 (288)
T ss_dssp ----CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred ----CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHHHHhc
Confidence 111122346889999999999999999999999999887653
No 51
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.3e-43 Score=347.67 Aligned_cols=260 Identities=22% Similarity=0.274 Sum_probs=200.2
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
.|++.++||+|+||+||+|...+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 22 ~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 101 (311)
T 3niz_A 22 KYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFM 101 (311)
T ss_dssp EEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECC
T ss_pred hhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCC
Confidence 4567789999999999999998899999999875432 23467889999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcc
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 353 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 353 (517)
+ |+|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++........
T Consensus 102 ~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 175 (311)
T 3niz_A 102 E-KDLKKVLDE--NKTGLQDSQIKIYLYQLLRGVAHCHQ---HRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS 175 (311)
T ss_dssp S-EEHHHHHHT--CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC-
T ss_pred C-CCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc
Confidence 7 488888764 34569999999999999999999999 99999999999999999999999999999876543222
Q ss_pred cccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc------
Q 010131 354 ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV------ 426 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 426 (517)
.....+|+.|+|||++.+ ..++.++||||+||++|+|++|+.||......+ ....+.............
T Consensus 176 -~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~ 251 (311)
T 3niz_A 176 -YTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD---QLPKIFSILGTPNPREWPQVQELP 251 (311)
T ss_dssp ---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT---HHHHHHHHHCCCCTTTSGGGTTSH
T ss_pred -ccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHHCCCChHHhhhhhccc
Confidence 233458999999999876 568999999999999999999999997443322 222222222111100000
Q ss_pred ---Cccc--cCCC-----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 427 ---DPVL--IGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 427 ---d~~l--~~~~-----~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+... .... .......+.+++.+||+.||++|||++|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 252 LWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp HHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0000 0000 0112246789999999999999999999986
No 52
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=6.8e-44 Score=341.71 Aligned_cols=255 Identities=29% Similarity=0.459 Sum_probs=210.8
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 275 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 275 (517)
.|.+.+.||+|+||.||+|.+.+++.||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 87 (267)
T 3t9t_A 9 ELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEH 87 (267)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTT
T ss_pred heeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCC
Confidence 4567789999999999999998889999999976533 346799999999999999999999999999999999999999
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcccc
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 355 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 355 (517)
++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++...........
T Consensus 88 ~~L~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~ 162 (267)
T 3t9t_A 88 GCLSDYLRTQ--RGLFAAETLLGMCLDVCEGMAYLEE---ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSS 162 (267)
T ss_dssp CBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHST
T ss_pred CcHHHHHhhC--cccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEECCCCCEEEccccccccccccccccc
Confidence 9999999753 4568999999999999999999999 9999999999999999999999999999987654322222
Q ss_pred cccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCC
Q 010131 356 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 434 (517)
Q Consensus 356 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 434 (517)
....++..|+|||.+.+..++.++||||||+++|+|++ |+.||..... .+... .+..+... ..+
T Consensus 163 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~-~i~~~~~~--~~~------ 227 (267)
T 3t9t_A 163 TGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN------SEVVE-DISTGFRL--YKP------ 227 (267)
T ss_dssp TSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHH-HHHTTCCC--CCC------
T ss_pred ccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH------HHHHH-HHhcCCcC--CCC------
Confidence 33446778999999988889999999999999999999 8999974322 11111 22222110 011
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 435 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 435 ~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
......+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 228 -~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 228 -RLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp -TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred -ccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 1123468899999999999999999999999998875
No 53
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.7e-43 Score=346.08 Aligned_cols=265 Identities=30% Similarity=0.479 Sum_probs=204.9
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEE
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 268 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 268 (517)
++...++.+.++||+|+||.||+|.+. ..+|+|+++... ....+.+.+|++++++++||||+++++++.. +..++
T Consensus 32 ~i~~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-~~~~l 108 (307)
T 3lb7_A 32 EIEASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAI 108 (307)
T ss_dssp BCCTTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEE
T ss_pred EecccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc-CcEEE
Confidence 444456778899999999999999875 368999887532 3345779999999999999999999998764 45899
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
||||+++++|.+++.. ....+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 109 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~ 183 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHV--QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKS 183 (307)
T ss_dssp EEECCSSCBHHHHHHT--SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCSSSEEECTTSCEEECCCCSSCC--
T ss_pred EEecCCCCcHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCChhhEEEcCCCCEEEccCCCceecc
Confidence 9999999999999974 35679999999999999999999999 999999999999999999999999999998654
Q ss_pred CC-CcccccccccCCCCcCCCccC---CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 349 ED-LTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 349 ~~-~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
.. .........||+.|+|||.+. +..++.++|||||||++|||++|+.||......+ . +......+....
T Consensus 184 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~--~----~~~~~~~~~~~~ 257 (307)
T 3lb7_A 184 RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD--Q----IIFMVGRGYASP 257 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH--H----HHHHHHHTCCCC
T ss_pred cccccccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHH--H----HHHHHhcCCCCc
Confidence 31 122223446899999999885 6678899999999999999999999997433211 1 111222221111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.+. ......+..+.+++.+||+.+|++||++.||++.|+.+....
T Consensus 258 ~~~-----~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 258 DLS-----KLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp CST-----TSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred chh-----hhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 110 111122346889999999999999999999999999887543
No 54
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.6e-43 Score=364.42 Aligned_cols=253 Identities=30% Similarity=0.490 Sum_probs=207.4
Q ss_pred HHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCC-eeEEEEEec
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-QRILVYEYM 273 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-~~~lv~e~~ 273 (517)
..+.+.+.||+|+||.||+|.+. |+.||||+++... ..+.|.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 193 ~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~ 269 (450)
T 1k9a_A 193 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 269 (450)
T ss_dssp GGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECC
T ss_pred HHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEec
Confidence 45566889999999999999987 7899999997643 4578999999999999999999999987655 789999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcc
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 353 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 353 (517)
++|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 270 ~~g~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 270 AKGSLVDYLRSR-GRSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp TTCBHHHHHHHH-CTTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred CCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 999999999854 23457999999999999999999999 999999999999999999999999999998653321
Q ss_pred cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 354 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
....++..|+|||.+.+..++.++|||||||++|||+| |+.||......+ .. ..+..+....
T Consensus 344 --~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~---~~----~~i~~~~~~~-------- 406 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV----PRVEKGYKMD-------- 406 (450)
T ss_dssp -----CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTT---HH----HHHHTTCCCC--------
T ss_pred --cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHHcCCCCC--------
Confidence 12246889999999999999999999999999999998 999997443322 11 1222221111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.+...+..+.+++.+||+.||++|||+.++++.|+++...+
T Consensus 407 -~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~~~ 447 (450)
T 1k9a_A 407 -APDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRTHE 447 (450)
T ss_dssp -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred -CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHhh
Confidence 11223457889999999999999999999999999987643
No 55
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.9e-43 Score=343.64 Aligned_cols=251 Identities=22% Similarity=0.300 Sum_probs=204.8
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc------hhHHHHHHHHHHHhcCCCCCccccceeeecCCee
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 266 (517)
...|.+.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356778899999999999999886 689999999875432 1357899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC----cEEEcccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 342 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 342 (517)
++||||+++|+|.+++. ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++ .+||+|||
T Consensus 90 ~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 90 ILILELVAGGELFDFLA---EKESLTEEEATEFLKQILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEEECCCSCBHHHHHT---TSSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEEcCCCCCHHHHHH---hcCCcCHHHHHHHHHHHHHHHHHHHH---CCeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 99999999999999997 35679999999999999999999999 9999999999999999887 89999999
Q ss_pred CccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 343 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 343 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
++........ .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...... +.... +.....
T Consensus 164 ~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~~~-~~~~~~ 234 (326)
T 2y0a_A 164 LAHKIDFGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLAN-VSAVNY 234 (326)
T ss_dssp TCEECCTTSC--CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHHH-HHHTCC
T ss_pred CCeECCCCCc--cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH------HHHHH-HHhcCC
Confidence 9987654322 23346899999999999999999999999999999999999999743221 11111 111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. . .+.... .....+.+++.+||+.||++|||+.|+++
T Consensus 235 ~-~-~~~~~~----~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 235 E-F-EDEYFS----NTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp C-C-CHHHHT----TSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred C-c-Cccccc----cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 0 000001 11235789999999999999999999987
No 56
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=7.5e-43 Score=348.42 Aligned_cols=249 Identities=24% Similarity=0.321 Sum_probs=204.0
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCch------hHHHHHHHHHHHhcCCCCCccccceeeecCCeeEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 268 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 268 (517)
.|.+.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 13 ~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 92 (361)
T 2yab_A 13 FYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVL 92 (361)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEE
Confidence 4667889999999999999886 6899999999754321 35789999999999999999999999999999999
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC----cEEEccccCc
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFGLS 344 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg~a 344 (517)
||||+++|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+||+++.++ .+||+|||++
T Consensus 93 v~e~~~gg~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 93 ILELVSGGELFDFLA---QKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEECCCSCBHHHHHT---TCSCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEcCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 999999999999997 35679999999999999999999999 9999999999999998877 7999999999
Q ss_pred cccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 345 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 345 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
........ .....||+.|+|||++.+..++.++|||||||++|+|++|..||...+.. +... .+..+...
T Consensus 167 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~------~~~~-~i~~~~~~- 236 (361)
T 2yab_A 167 HEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ------ETLA-NITAVSYD- 236 (361)
T ss_dssp EECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH------HHHH-HHHTTCCC-
T ss_pred eEcCCCCc--cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH------HHHH-HHHhcCCC-
Confidence 87654322 23456899999999999999999999999999999999999999743221 1111 12222110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.++..... ....+.+++.+||..||++|||+.|+++
T Consensus 237 -~~~~~~~~----~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 237 -FDEEFFSQ----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp -CCHHHHTT----SCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred -CCchhccC----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01111111 1235789999999999999999999985
No 57
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=1e-43 Score=355.62 Aligned_cols=263 Identities=27% Similarity=0.413 Sum_probs=210.0
Q ss_pred HHHHHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcC-CCCCccccceeeecCC
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 264 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 264 (517)
....|.+.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|++++.++ +||||+++++++.+.+
T Consensus 20 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~ 99 (359)
T 3vhe_A 20 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 99 (359)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT
T ss_pred cccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCC
Confidence 3445667899999999999999742 468899999976543 3456799999999999 7999999999988755
Q ss_pred -eeEEEEEecCCCCHHhHhhccCC--------------------------------------------------------
Q 010131 265 -QRILVYEYMHNGTLRDRLHGSVN-------------------------------------------------------- 287 (517)
Q Consensus 265 -~~~lv~e~~~~gsL~~~l~~~~~-------------------------------------------------------- 287 (517)
..++||||+++|+|.+++.....
T Consensus 100 ~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (359)
T 3vhe_A 100 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 179 (359)
T ss_dssp SCCEEEEECCTTEEHHHHHHTTTTSBCSCC--------------------------------------------------
T ss_pred CceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhc
Confidence 48999999999999999975431
Q ss_pred -------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc-ccccccc
Q 010131 288 -------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-HISSVAR 359 (517)
Q Consensus 288 -------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~ 359 (517)
...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........ .......
T Consensus 180 ~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~ 256 (359)
T 3vhe_A 180 EAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 256 (359)
T ss_dssp ----CTTTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CE
T ss_pred ccccchhccccCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchhccccC
Confidence 1228999999999999999999999 9999999999999999999999999999987644322 2233455
Q ss_pred cCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCCCHHH
Q 010131 360 GTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIES 438 (517)
Q Consensus 360 g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~ 438 (517)
||+.|+|||++.+..++.++|||||||++|||+| |+.||....... .+...+..+..... +...
T Consensus 257 ~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~------~~~~~~~~~~~~~~---------~~~~ 321 (359)
T 3vhe_A 257 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE------EFCRRLKEGTRMRA---------PDYT 321 (359)
T ss_dssp ECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSH------HHHHHHHHTCCCCC---------CTTC
T ss_pred CCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhH------HHHHHHHcCCCCCC---------CCCC
Confidence 7889999999998899999999999999999998 999997443221 11222222221111 1112
Q ss_pred HHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 439 IWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 439 ~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
...+.+++.+||+.||++|||++||++.|+.+++.
T Consensus 322 ~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~ 356 (359)
T 3vhe_A 322 TPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 356 (359)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHH
Confidence 23688999999999999999999999999998864
No 58
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.5e-43 Score=347.56 Aligned_cols=261 Identities=26% Similarity=0.430 Sum_probs=212.1
Q ss_pred HHHHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCee
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 266 (517)
...|.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 345667889999999999999862 357899999976433 3457799999999999999999999999999999
Q ss_pred EEEEEecCCCCHHhHhhccCC---------------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCC
Q 010131 267 ILVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKS 325 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~ 325 (517)
++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAE---MKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHH---TTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHH---CCCcccccch
Confidence 999999999999999975432 2358999999999999999999999 9999999999
Q ss_pred CCeEeCCCCcEEEccccCccccCCCCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCc
Q 010131 326 SNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDF 403 (517)
Q Consensus 326 ~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~ 403 (517)
+||+++.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||+| |+.||.....
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~ 258 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPP 258 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999999876443222 2223446788999999988889999999999999999999 9999974432
Q ss_pred cccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 404 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
.. .. ..+..+.... ........+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 259 ~~---~~----~~~~~~~~~~---------~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~ 312 (314)
T 2ivs_A 259 ER---LF----NLLKTGHRME---------RPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMMVK 312 (314)
T ss_dssp GG---HH----HHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHT
T ss_pred HH---HH----HHhhcCCcCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhh
Confidence 21 11 2222222111 1112234688999999999999999999999999998764
No 59
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=7.5e-43 Score=349.19 Aligned_cols=254 Identities=23% Similarity=0.315 Sum_probs=206.3
Q ss_pred HHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEE
Q 010131 192 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 268 (517)
Q Consensus 192 l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 268 (517)
.....|.+.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++
T Consensus 26 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~l 105 (362)
T 2bdw_A 26 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYL 105 (362)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEE
Confidence 34567888999999999999999876 68999999997543 2345678999999999999999999999999999999
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC---CcEEEccccCcc
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLSR 345 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a~ 345 (517)
||||+++|+|.+++. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||++.
T Consensus 106 v~e~~~gg~L~~~l~---~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~ 179 (362)
T 2bdw_A 106 VFDLVTGGELFEDIV---AREFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAI 179 (362)
T ss_dssp EECCCCSCBHHHHHT---TCSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred EEecCCCCCHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence 999999999999987 35679999999999999999999999 999999999999999865 459999999998
Q ss_pred ccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 346 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 346 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+. .. ....+..+....
T Consensus 180 ~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~------~~-~~~~i~~~~~~~- 249 (362)
T 2bdw_A 180 EVNDSEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ------HR-LYAQIKAGAYDY- 249 (362)
T ss_dssp CCTTCCS--CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHTCCCC-
T ss_pred EecCCcc--cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HH-HHHHHHhCCCCC-
Confidence 7654322 2335689999999999999999999999999999999999999974322 11 112222222110
Q ss_pred cCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 426 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 426 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
..+. .......+.+++.+||+.||++|||+.|+++.
T Consensus 250 ~~~~-----~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 250 PSPE-----WDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp CTTG-----GGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred Cccc-----ccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0000 01123467899999999999999999998753
No 60
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.4e-44 Score=357.42 Aligned_cols=266 Identities=27% Similarity=0.436 Sum_probs=212.3
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecC
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 263 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 263 (517)
++....+.+.+.||+|+||+||+|.+. +++.||||++.... ......+.+|+.++++++||||+++++++.+.
T Consensus 67 ~~~~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~ 146 (367)
T 3l9p_A 67 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 146 (367)
T ss_dssp BCCGGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hcCHhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence 344456778899999999999999853 46789999997543 34456789999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHhHhhccC----CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC---cE
Q 010131 264 HQRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RA 336 (517)
Q Consensus 264 ~~~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~---~~ 336 (517)
+..++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++ .+
T Consensus 147 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~ 223 (367)
T 3l9p_A 147 LPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVA 223 (367)
T ss_dssp SSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEEecCCCCceE
Confidence 99999999999999999997643 22468999999999999999999999 9999999999999999555 59
Q ss_pred EEccccCccccCCCC-cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHH
Q 010131 337 KVSDFGLSRQAEEDL-THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 414 (517)
Q Consensus 337 kl~Dfg~a~~~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 414 (517)
||+|||+++...... ........+|+.|+|||++.+..++.++|||||||++|||+| |..||..... .+..
T Consensus 224 kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~------~~~~- 296 (367)
T 3l9p_A 224 KIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QEVL- 296 (367)
T ss_dssp EECCCHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HHHH-
T ss_pred EECCCccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH------HHHH-
Confidence 999999997643221 122233457889999999988899999999999999999998 9999974322 1111
Q ss_pred HHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 415 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 415 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
..+..+..... ....+..+.+++.+||+.||++|||+.||++.|+.+.....
T Consensus 297 ~~i~~~~~~~~---------~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~~~~~ 348 (367)
T 3l9p_A 297 EFVTSGGRMDP---------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 348 (367)
T ss_dssp HHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHcCCCCCC---------CccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhhChh
Confidence 22222221111 11223468899999999999999999999999998876543
No 61
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=2.7e-44 Score=370.48 Aligned_cols=261 Identities=27% Similarity=0.428 Sum_probs=206.9
Q ss_pred HHHHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 192 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 192 l~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
+....+.+.++||+|+||.||+|.++++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++|||
T Consensus 181 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e 258 (452)
T 1fmk_A 181 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 258 (452)
T ss_dssp CCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEeh
Confidence 3344567789999999999999999988889999997543 345789999999999999999999999876 67899999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++... ....+++..++.++.|++.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 259 ~~~~gsL~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 259 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCTTCBHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhcCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 99999999999743 23468999999999999999999999 999999999999999999999999999998765433
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
........++..|+|||.+.+..++.++||||||+++|||+| |+.||...... + +...+..+...
T Consensus 335 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~------~-~~~~i~~~~~~------- 400 (452)
T 1fmk_A 335 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR------E-VLDQVERGYRM------- 400 (452)
T ss_dssp --------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHTTCCC-------
T ss_pred eecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHcCCCC-------
Confidence 222233446788999999988899999999999999999999 99999743221 1 11222222111
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
..+...+..+.+++.+||+.||++|||+++|++.|+++....
T Consensus 401 --~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~ 442 (452)
T 1fmk_A 401 --PCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST 442 (452)
T ss_dssp --CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred --CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence 111223446889999999999999999999999999887543
No 62
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-43 Score=350.90 Aligned_cols=261 Identities=27% Similarity=0.434 Sum_probs=210.6
Q ss_pred HHHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 267 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 267 (517)
..|.+.+.||+|+||.||+|++. +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 47 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 126 (343)
T 1luf_A 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 126 (343)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCE
T ss_pred HHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceE
Confidence 45567889999999999999875 348899999976543 34567999999999999999999999999999999
Q ss_pred EEEEecCCCCHHhHhhccCC---------------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCC
Q 010131 268 LVYEYMHNGTLRDRLHGSVN---------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSS 326 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~---------------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~ 326 (517)
+||||+++|+|.+++..... ...+++.+++.++.||+.||+|||+ ++|+||||||+
T Consensus 127 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~ 203 (343)
T 1luf_A 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSE---RKFVHRDLATR 203 (343)
T ss_dssp EEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGG
T ss_pred EEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcc
Confidence 99999999999999975321 2579999999999999999999999 99999999999
Q ss_pred CeEeCCCCcEEEccccCccccCCCCc-ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCcc
Q 010131 327 NILLDINMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFG 404 (517)
Q Consensus 327 Nill~~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~ 404 (517)
||+++.++.+||+|||++........ .......+|+.|+|||.+.+..++.++||||||+++|||+| |..||.....
T Consensus 204 NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~- 282 (343)
T 1luf_A 204 NCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAH- 282 (343)
T ss_dssp GEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-
T ss_pred eEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCCCCh-
Confidence 99999999999999999986543221 22233457889999999988889999999999999999999 9999974322
Q ss_pred ccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 405 AELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 405 ~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.+ ....+..+..... +...+..+.+++.+||+.||++|||+.||++.|+++.+..
T Consensus 283 -----~~-~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 283 -----EE-VIYYVRDGNILAC---------PENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp -----HH-HHHHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred -----HH-HHHHHhCCCcCCC---------CCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 11 1222333322111 1122346889999999999999999999999999987643
No 63
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.6e-43 Score=348.85 Aligned_cols=251 Identities=25% Similarity=0.380 Sum_probs=200.3
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
.|++.+.||+|+||+||+|... +++.||||++..... ...+.+.+|+.+++.++||||+++++++.+.+..++||||+
T Consensus 8 ~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~ 87 (323)
T 3tki_A 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYC 87 (323)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcC
Confidence 3566789999999999999876 789999999865432 23466889999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC-c
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL-T 352 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~-~ 352 (517)
++|+|.+++. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....... .
T Consensus 88 ~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 161 (323)
T 3tki_A 88 SGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE 161 (323)
T ss_dssp TTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE
T ss_pred CCCcHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc
Confidence 9999999997 45679999999999999999999999 999999999999999999999999999998654322 1
Q ss_pred ccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 353 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.......||+.|+|||++.+..+ +.++|||||||++|+|++|+.||....... .....+ ........ +
T Consensus 162 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~~~----~~~~~~~~---~--- 230 (323)
T 3tki_A 162 RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDW----KEKKTYLN---P--- 230 (323)
T ss_dssp CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTS-HHHHHH----HTTCTTST---T---
T ss_pred cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHH----hcccccCC---c---
Confidence 22234568999999999977665 789999999999999999999997443221 111111 11111100 0
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
.......+.+++.+||+.||++|||++|+++.
T Consensus 231 ---~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 231 ---WKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp ---GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred ---cccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 01123367899999999999999999999763
No 64
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=9.8e-43 Score=337.42 Aligned_cols=252 Identities=31% Similarity=0.526 Sum_probs=201.7
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchh-------HHHHHHHHHHHhcCCCCCccccceeeecCCee
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHR-------TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 266 (517)
..|++.+.||+|+||+||+|++. +++.||+|++....... .+.+.+|+.++++++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 45667889999999999999875 78999999986533221 167899999999999999999999997665
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--cEecCCCCCCeEeCCCCc-----EEEc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMR-----AKVS 339 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~dlk~~Nill~~~~~-----~kl~ 339 (517)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+ |+||||||+||+++.++. +||+
T Consensus 97 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~ 171 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLD--KAHPIKWSVKLRLMLDIALGIEYMQN---QNPPIVHRDLRSPNIFLQSLDENAPVCAKVA 171 (287)
T ss_dssp EEEEECCTTCBHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCSCCSGGGEEESCCCTTCSCCEEEC
T ss_pred eEEEEecCCCCHHHHHhc--ccCCccHHHHHHHHHHHHHHHHHHHh---CCCCeecCCCCcceEEEeccCCCCceeEEeC
Confidence 799999999999998864 34579999999999999999999999 88 999999999999988776 9999
Q ss_pred cccCccccCCCCcccccccccCCCCcCCCcc--CCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 010131 340 DFGLSRQAEEDLTHISSVARGTVGYLDPEYY--GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 417 (517)
Q Consensus 340 Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~--~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 417 (517)
|||+++..... .....||+.|+|||.+ ....++.++|||||||++|||++|+.||....... ........
T Consensus 172 Dfg~~~~~~~~----~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~----~~~~~~~~ 243 (287)
T 4f0f_A 172 DFGLSQQSVHS----VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGK----IKFINMIR 243 (287)
T ss_dssp CCTTCBCCSSC----EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCH----HHHHHHHH
T ss_pred CCCcccccccc----ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccH----HHHHHHHh
Confidence 99999865432 2335689999999998 45567899999999999999999999997433321 11112222
Q ss_pred hcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 010131 418 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 470 (517)
Q Consensus 418 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 470 (517)
..+.. +.+ ....+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 244 ~~~~~-----~~~----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 244 EEGLR-----PTI----PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HSCCC-----CCC----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred ccCCC-----CCC----CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 21111 111 112234688999999999999999999999999864
No 65
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=6.7e-43 Score=340.55 Aligned_cols=247 Identities=28% Similarity=0.395 Sum_probs=194.7
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--------------------------hhHHHHHHHHHHHhcC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------------------------HRTQQFVTEVALLSRI 248 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l 248 (517)
.|.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+++++++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 93 (298)
T 2zv2_A 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL 93 (298)
T ss_dssp TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence 4667889999999999999875 688999999865421 1135688999999999
Q ss_pred CCCCccccceeeec--CCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCC
Q 010131 249 HHRNLVPLIGYCEE--EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSS 326 (517)
Q Consensus 249 ~h~niv~~~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~ 326 (517)
+||||+++++++.+ .+..++||||+++++|.+++. ...+++..++.++.|++.||+|||+ .+|+||||||+
T Consensus 94 ~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~ 166 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPT----LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPS 166 (298)
T ss_dssp CCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSC----SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGG
T ss_pred CCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHH
Confidence 99999999999986 567899999999999988653 4579999999999999999999999 99999999999
Q ss_pred CeEeCCCCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCC---CCccceehhHHHHHHHHHhCCCCCCCCCc
Q 010131 327 NILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDF 403 (517)
Q Consensus 327 Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~p~~~~~~ 403 (517)
||+++.++.+||+|||++......... .....||+.|+|||.+.+.. ++.++|||||||++|+|++|+.||.....
T Consensus 167 Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~ 245 (298)
T 2zv2_A 167 NLLVGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERI 245 (298)
T ss_dssp GEEECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSH
T ss_pred HEEECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccH
Confidence 999999999999999999876543222 23346899999999997755 47889999999999999999999974321
Q ss_pred cccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 404 GAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.... ..+....... .+ .......+.+++.+||+.||++|||++|+++
T Consensus 246 ------~~~~-~~~~~~~~~~-~~-------~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 246 ------MCLH-SKIKSQALEF-PD-------QPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp ------HHHH-HHHHHCCCCC-CS-------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ------HHHH-HHHhcccCCC-CC-------ccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 1111 2222221110 00 0112246889999999999999999999875
No 66
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3.4e-44 Score=353.05 Aligned_cols=264 Identities=25% Similarity=0.396 Sum_probs=209.1
Q ss_pred hhhcccCCCCceEEEEEEec-----CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecC--CeeEEE
Q 010131 198 NFCKKIGKGSFGSVYYGKMK-----DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQRILV 269 (517)
Q Consensus 198 ~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv 269 (517)
++.+.||+|+||+||++.+. +++.||||++..... ...+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 67889999999999998653 588999999986543 3456799999999999999999999999874 578999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|||+++|+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.....
T Consensus 114 ~e~~~~~~L~~~l~~----~~~~~~~~~~i~~~l~~~l~~LH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 186 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPR----HSIGLAQLLLFAQQICEGMAYLHA---QHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186 (318)
T ss_dssp ECCCTTCBHHHHGGG----SCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCGGGCEECCT
T ss_pred EecccCCcHHHHHhh----CCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEEcCCCCEEECCccccccccc
Confidence 999999999999973 349999999999999999999999 9999999999999999999999999999987654
Q ss_pred CCc--ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCcc--------ccccHHHHHHHHHhc
Q 010131 350 DLT--HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG--------AELNIVHWARSMIKK 419 (517)
Q Consensus 350 ~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~--------~~~~~~~~~~~~~~~ 419 (517)
... .......++..|+|||.+.+..++.++||||||+++|+|+||+.||...... ............+..
T Consensus 187 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 187 GHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp TCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred cccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 332 1223345788899999999889999999999999999999999998632211 000001111122222
Q ss_pred CCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 010131 420 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 477 (517)
Q Consensus 420 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 477 (517)
+.. .......+..+.+++.+||+.||++|||++|+++.|+.+.+.-...
T Consensus 267 ~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~~~~ 315 (318)
T 3lxp_A 267 GER---------LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVHEKYQGQ 315 (318)
T ss_dssp TCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHHC-
T ss_pred ccC---------CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHhhccC
Confidence 211 1112223357889999999999999999999999999988765433
No 67
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=4.9e-43 Score=346.55 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=199.2
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCC--------
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH-------- 264 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 264 (517)
..|++.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 85 (332)
T 3qd2_B 6 TDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEM 85 (332)
T ss_dssp HHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHH
T ss_pred hcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhh
Confidence 35667899999999999999987 79999999997543 335678999999999999999999999885543
Q ss_pred -------------------------------------------------eeEEEEEecCCCCHHhHhhccCCCCccCHHH
Q 010131 265 -------------------------------------------------QRILVYEYMHNGTLRDRLHGSVNQKPLDWLT 295 (517)
Q Consensus 265 -------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~ 295 (517)
..++||||+++++|.+++.........++..
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~ 165 (332)
T 3qd2_B 86 DEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGV 165 (332)
T ss_dssp HC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHH
T ss_pred hhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHH
Confidence 2789999999999999998665555677788
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc-----------ccccccccCCCC
Q 010131 296 RLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT-----------HISSVARGTVGY 364 (517)
Q Consensus 296 ~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~-----------~~~~~~~g~~~y 364 (517)
++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++....... .......||+.|
T Consensus 166 ~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 242 (332)
T 3qd2_B 166 CLHIFIQIAEAVEFLHS---KGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY 242 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG
T ss_pred HHHHHHHHHHHHHHHHh---CCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc
Confidence 99999999999999999 9999999999999999999999999999987655321 112334689999
Q ss_pred cCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHH
Q 010131 365 LDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAE 444 (517)
Q Consensus 365 ~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~ 444 (517)
+|||.+.+..++.++|||||||++|||++|..|+. .... ............ ........+.+
T Consensus 243 ~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~--------~~~~-~~~~~~~~~~~~---------~~~~~~~~~~~ 304 (332)
T 3qd2_B 243 MSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQM--------ERVR-IITDVRNLKFPL---------LFTQKYPQEHM 304 (332)
T ss_dssp SCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHH--------HHHH-HHHHHHTTCCCH---------HHHHHCHHHHH
T ss_pred cChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChh--------HHHH-HHHHhhccCCCc---------ccccCChhHHH
Confidence 99999999999999999999999999999877653 0111 111111111111 11223346789
Q ss_pred HHHHhhccCCCCCCCHHHHHH
Q 010131 445 VAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 445 li~~cl~~~P~~RPs~~evl~ 465 (517)
++.+||+.||++|||++|+++
T Consensus 305 li~~~l~~~p~~Rps~~~~l~ 325 (332)
T 3qd2_B 305 MVQDMLSPSPTERPEATDIIE 325 (332)
T ss_dssp HHHHHHCSSGGGSCCHHHHHH
T ss_pred HHHHHccCCCCcCCCHHHHhh
Confidence 999999999999999999986
No 68
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=3.6e-43 Score=359.86 Aligned_cols=252 Identities=22% Similarity=0.292 Sum_probs=204.2
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 270 (517)
...|.+.+.||+|+||+||+|... +|+.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 10 ~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~ 89 (444)
T 3soa_A 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIF 89 (444)
T ss_dssp HHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEE
T ss_pred cCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEE
Confidence 456778899999999999999875 689999999875432 34567899999999999999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC---CCCcEEEccccCcccc
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQA 347 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~a~~~ 347 (517)
||+++|+|.+.+.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++ .++.+||+|||++...
T Consensus 90 E~~~gg~L~~~i~~---~~~~~e~~~~~i~~qil~aL~~lH~---~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~ 163 (444)
T 3soa_A 90 DLVTGGELFEDIVA---REYYSEADASHCIQQILEAVLHCHQ---MGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163 (444)
T ss_dssp CCCBCCBHHHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCC
T ss_pred EeCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEeccCCCCcEEEccCceeEEe
Confidence 99999999999874 4679999999999999999999999 9999999999999998 4688999999999876
Q ss_pred CCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccC
Q 010131 348 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 427 (517)
Q Consensus 348 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 427 (517)
...... .....||+.|+|||++.+..++.++||||+||++|+|++|+.||...+.. + ....+..+... ...
T Consensus 164 ~~~~~~-~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~------~-~~~~i~~~~~~-~~~ 234 (444)
T 3soa_A 164 EGEQQA-WFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH------R-LYQQIKAGAYD-FPS 234 (444)
T ss_dssp CTTCCB-CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHH------H-HHHHHHHTCCC-CCT
T ss_pred cCCCce-eecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHH------H-HHHHHHhCCCC-CCc
Confidence 543322 23356899999999999999999999999999999999999999743321 1 11222222211 111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 428 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 428 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+. .......+.+++.+||+.||++|||+.|+++
T Consensus 235 ~~-----~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 235 PE-----WDTVTPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp TT-----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred cc-----cccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 10 0112346789999999999999999999987
No 69
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=4.2e-43 Score=346.04 Aligned_cols=263 Identities=26% Similarity=0.417 Sum_probs=196.6
Q ss_pred HHHHhhhcccCCCCceEEEEEEecCC----cEEEEEEecCC--CchhHHHHHHHHHHHhcCCCCCccccceeeecCCee-
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMKDG----KEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR- 266 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~~~----~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~- 266 (517)
...|.+.+.||+|+||.||+|.+... ..||||++... .....+.+.+|++++++++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 101 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKG 101 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccccc
Confidence 44667789999999999999987643 27999998754 334567899999999999999999999999876655
Q ss_pred -----EEEEEecCCCCHHhHhhccC---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEE
Q 010131 267 -----ILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKV 338 (517)
Q Consensus 267 -----~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 338 (517)
++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||
T Consensus 102 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~Dikp~NIli~~~~~~kl 178 (323)
T 3qup_A 102 RLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSS---RNFIHRDLAARNCMLAEDMTVCV 178 (323)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEE
T ss_pred CCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHc---CCcccCCCCcceEEEcCCCCEEE
Confidence 99999999999999986533 22368999999999999999999999 99999999999999999999999
Q ss_pred ccccCccccCCCCc-ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHH
Q 010131 339 SDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSM 416 (517)
Q Consensus 339 ~Dfg~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 416 (517)
+|||+++....... .......+++.|+|||.+.+..++.++|||||||++|||++ |+.||....... ... .
T Consensus 179 ~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~~----~ 251 (323)
T 3qup_A 179 ADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE---IYN----Y 251 (323)
T ss_dssp CCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HHH----H
T ss_pred eeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccChHH---HHH----H
Confidence 99999987644322 11223346778999999998899999999999999999999 999997433221 111 1
Q ss_pred HhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 417 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 417 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
+..+.... ........+.+++.+||+.||++|||+.++++.|++++.-..
T Consensus 252 ~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~ 301 (323)
T 3qup_A 252 LIGGNRLK---------QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLS 301 (323)
T ss_dssp HHTTCCCC---------CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC--
T ss_pred HhcCCCCC---------CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhh
Confidence 11111111 111223468899999999999999999999999999987654
No 70
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=6.3e-43 Score=344.09 Aligned_cols=250 Identities=19% Similarity=0.293 Sum_probs=204.0
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
.|.+.+.||+|+||.||+|... +++.||+|.+... ......+.+|+.+++.++||||+++++++.+.+..++||||++
T Consensus 6 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 84 (321)
T 1tki_A 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFIS 84 (321)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCC
T ss_pred ceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC-cccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCC
Confidence 4567789999999999999876 5889999998744 3445678899999999999999999999999999999999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC--CCcEEEccccCccccCCCCc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+|+|.+++.. ....+++..++.++.|++.||.|||+ .+|+||||||+||+++. ++.+||+|||++........
T Consensus 85 g~~L~~~l~~--~~~~~~~~~~~~i~~qi~~al~~lH~---~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 85 GLDIFERINT--SAFELNEREIVSYVHQVCEALQFLHS---HNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCBHHHHHTS--SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 9999999964 23469999999999999999999999 99999999999999987 78999999999987654322
Q ss_pred ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 353 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
.....||+.|+|||++.+..++.++|||||||++|+|++|..||..... .+....... +... .++....
T Consensus 160 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~~i~~-~~~~--~~~~~~~ 228 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETN------QQIIENIMN-AEYT--FDEEAFK 228 (321)
T ss_dssp --EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH-TCCC--CCHHHHT
T ss_pred --cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHc-CCCC--CChhhhc
Confidence 2334589999999999998899999999999999999999999974322 112222222 1111 0000001
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
.....+.+++.+||+.||++|||+.|+++.
T Consensus 229 ----~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 229 ----EISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp ----TSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 123467899999999999999999999873
No 71
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.3e-43 Score=343.87 Aligned_cols=256 Identities=22% Similarity=0.375 Sum_probs=204.1
Q ss_pred HHHHHhhhcccCCCCceEEEEEEecC-C-------cEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCC
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMKD-G-------KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 264 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 264 (517)
....|.+.+.||+|+||+||+|.... + ..||+|++........+.+.+|+.++++++||||+++++++.+.+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 6 RNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred chhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 34456778999999999999998763 3 579999997766667788999999999999999999999999999
Q ss_pred eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc--------E
Q 010131 265 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--------A 336 (517)
Q Consensus 265 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~--------~ 336 (517)
..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++. +
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 160 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKN--KNCINILWKLEVAKQLAAAMHFLEE---NTLIHGNVCAKNILLIREEDRKTGNPPFI 160 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHT--GGGCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEEECCBGGGTBCCEE
T ss_pred CCEEEEECCCCCCHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeECCCcCcceEEEecCCccccccccee
Confidence 999999999999999999753 3448999999999999999999999 99999999999999998887 9
Q ss_pred EEccccCccccCCCCcccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 010131 337 KVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 415 (517)
Q Consensus 337 kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 415 (517)
||+|||++...... ....+++.|+|||.+.+ ..++.++||||||+++|||++|..|+...... ......
T Consensus 161 kl~Dfg~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~-----~~~~~~ 230 (289)
T 4fvq_A 161 KLSDPGISITVLPK-----DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDS-----QRKLQF 230 (289)
T ss_dssp EECCCCSCTTTSCH-----HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH-----HHHHHH
T ss_pred eeccCcccccccCc-----cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccch-----HHHHHH
Confidence 99999998765432 22347889999999987 77899999999999999999965554312111 111111
Q ss_pred HHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 416 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 416 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
........... ...+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 231 ~~~~~~~~~~~------------~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~~p~~ 278 (289)
T 4fvq_A 231 YEDRHQLPAPK------------AAELANLINNCMDYEPDHRPSFRAIIRDLNSLFTPDL 278 (289)
T ss_dssp HHTTCCCCCCS------------SCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC----
T ss_pred hhccCCCCCCC------------CHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCC
Confidence 11111111111 1247799999999999999999999999998876443
No 72
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=2.7e-43 Score=351.24 Aligned_cols=255 Identities=23% Similarity=0.293 Sum_probs=205.0
Q ss_pred HHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCC-----CchhHHHHHHHHHHHhcCCCCCccccceeeecCCee
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-----CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 266 (517)
....|++.+.||+|+||+||+|... +|+.||||++... .....+.+.+|+.+++.++||||+++++++.+.+..
T Consensus 22 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 101 (351)
T 3c0i_A 22 FEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGML 101 (351)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEE
T ss_pred cccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 4567888999999999999999876 6899999998532 122457899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc---EEEcccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFG 342 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg 342 (517)
++||||+++++|.+++.... ....+++..+..++.||+.||+|||+ ++|+||||||+|||++.++. +||+|||
T Consensus 102 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 102 YMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHD---NNIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999988876432 34568999999999999999999999 99999999999999987654 9999999
Q ss_pred CccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 343 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 343 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
++........ ......||+.|+|||++.+..++.++|||||||++|+|++|+.||.... .+.. ..+..+..
T Consensus 179 ~a~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~-------~~~~-~~i~~~~~ 249 (351)
T 3c0i_A 179 VAIQLGESGL-VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK-------ERLF-EGIIKGKY 249 (351)
T ss_dssp TCEECCTTSC-BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH-------HHHH-HHHHHTCC
T ss_pred ceeEecCCCe-eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH-------HHHH-HHHHcCCC
Confidence 9987654322 2234468999999999999999999999999999999999999997421 1111 11222211
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. ..+..... ....+.+++.+||+.||++|||+.|+++
T Consensus 250 ~--~~~~~~~~----~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 250 K--MNPRQWSH----ISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp C--CCHHHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred C--CCcccccc----CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 1 00100011 1246789999999999999999999986
No 73
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=4.6e-43 Score=336.75 Aligned_cols=249 Identities=30% Similarity=0.419 Sum_probs=193.3
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCc----hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS----HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|.+. ++.||||++..... ...+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 8 ~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (271)
T 3dtc_A 8 ELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVME 86 (271)
T ss_dssp SEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEE
T ss_pred heeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEE
Confidence 4566789999999999999986 89999999865432 234678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC---cEecCCCCCCeEeCC--------CCcEEEcc
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG---IIHRDVKSSNILLDI--------NMRAKVSD 340 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~---ivH~dlk~~Nill~~--------~~~~kl~D 340 (517)
|+++++|.+++. ...+++..++.++.|++.||+|||+ .+ ++||||||+||+++. ++.+||+|
T Consensus 87 ~~~~~~L~~~~~----~~~~~~~~~~~i~~~l~~~l~~lH~---~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~D 159 (271)
T 3dtc_A 87 FARGGPLNRVLS----GKRIPPDILVNWAVQIARGMNYLHD---EAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159 (271)
T ss_dssp CCTTEEHHHHHT----SSCCCHHHHHHHHHHHHHHHHHHHH---SSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECC
T ss_pred cCCCCCHHHHhh----cCCCCHHHHHHHHHHHHHHHHHHHh---CCCCceeecCCchHHEEEecccccccccCcceEEcc
Confidence 999999999985 4579999999999999999999999 77 999999999999986 77899999
Q ss_pred ccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC
Q 010131 341 FGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 420 (517)
Q Consensus 341 fg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 420 (517)
||++........ ....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+.. ..........
T Consensus 160 fg~~~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~~~~~~ 230 (271)
T 3dtc_A 160 FGLAREWHRTTK---MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGL------AVAYGVAMNK 230 (271)
T ss_dssp CCC----------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHH------HHHHHHHTSC
T ss_pred CCcccccccccc---cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHhhhcCC
Confidence 999986644322 2345899999999999889999999999999999999999999743211 1111111111
Q ss_pred CcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhh
Q 010131 421 DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDS 470 (517)
Q Consensus 421 ~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~ 470 (517)
.. ...+...+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 231 -~~--------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 231 -LA--------LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp -CC--------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred -CC--------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 11 011112234688999999999999999999999999864
No 74
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=3.6e-43 Score=353.94 Aligned_cols=248 Identities=22% Similarity=0.344 Sum_probs=198.5
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---hhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 270 (517)
.|++.++||+|+||.||+|+.+ +++.||+|++++... ...+.+..|..++.++ +||||+++++++.+.+..++||
T Consensus 53 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~ 132 (396)
T 4dc2_A 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 132 (396)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEE
Confidence 4567899999999999999887 578999999975422 2234578899999887 8999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 133 E~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 133 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EcCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 99999999999974 4579999999999999999999999 99999999999999999999999999999863322
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccc--cccHHHHHHHHHhcCCcccccCc
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA--ELNIVHWARSMIKKGDVISIVDP 428 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~ 428 (517)
. .......||+.|+|||++.+..++.++|||||||++|||++|+.||....... .....+.+...+..+...
T Consensus 207 ~-~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 280 (396)
T 4dc2_A 207 G-DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR----- 280 (396)
T ss_dssp T-CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCC-----
T ss_pred C-CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccC-----
Confidence 2 22344569999999999999999999999999999999999999996433221 111122222333222211
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 010131 429 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 460 (517)
Q Consensus 429 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 460 (517)
+ +......+.+++.+||+.||++||++
T Consensus 281 -~----p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 281 -I----PRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp -C----CTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred -C----CCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 1 11122367899999999999999996
No 75
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=6.8e-44 Score=352.25 Aligned_cols=258 Identities=24% Similarity=0.416 Sum_probs=202.4
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCc----EEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 267 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 267 (517)
...|++.+.||+|+||+||+|++. +++ .||+|.+.... ....+.+.+|+.++++++||||++++++|.+.. .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 345667899999999999999865 344 36888875433 345678999999999999999999999998765 78
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
+|+||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 93 ~v~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEECCTTCBHHHHHHHS--TTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred EEEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 999999999999999753 4679999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 348 EEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 348 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
...... ......+|+.|+|||++.+..++.++|||||||++|||+| |+.||....... .. ..+..+....
T Consensus 168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~---~~----~~~~~~~~~~- 239 (327)
T 3poz_A 168 GAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS----SILEKGERLP- 239 (327)
T ss_dssp TTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH----HHHHTTCCCC-
T ss_pred cCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHH---HH----HHHHcCCCCC-
Confidence 443222 2223346789999999999999999999999999999999 999997443322 11 2222221111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 426 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 426 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
........+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 240 --------~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~~ 279 (327)
T 3poz_A 240 --------QPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp --------CCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHTS
T ss_pred --------CCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhh
Confidence 1112234688999999999999999999999999988753
No 76
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=3.6e-43 Score=344.75 Aligned_cols=263 Identities=29% Similarity=0.449 Sum_probs=213.1
Q ss_pred HHHHhhhcccCCCCceEEEEEEe------cCCcEEEEEEecCCCc-hhHHHHHHHHHHHhcC-CCCCccccceeeecCCe
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 265 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 265 (517)
...|.+.+.||+|+||.||+|++ .+++.||||++..... ...+.+.+|+.+++++ +||||+++++++.+.+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 34567789999999999999985 2468899999976543 3457799999999999 99999999999999999
Q ss_pred eEEEEEecCCCCHHhHhhccCC---------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe
Q 010131 266 RILVYEYMHNGTLRDRLHGSVN---------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 330 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~~---------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill 330 (517)
.++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+++||||||+||++
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEE
Confidence 9999999999999999975431 2258999999999999999999999 999999999999999
Q ss_pred CCCCcEEEccccCccccCCCCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCcccccc
Q 010131 331 DINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 408 (517)
Q Consensus 331 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~ 408 (517)
+.++.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|+|+| |+.||....... .
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~--~ 256 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDS--K 256 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSH--H
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchh--H
Confidence 99999999999999876554322 2233446788999999988899999999999999999999 999997433221 1
Q ss_pred HHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 409 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
....+..+... . .....+..+.+++.+||+.||.+|||+.|+++.|++++...
T Consensus 257 ----~~~~~~~~~~~-----~----~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 309 (313)
T 1t46_A 257 ----FYKMIKEGFRM-----L----SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQISES 309 (313)
T ss_dssp ----HHHHHHHTCCC-----C----CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHT
T ss_pred ----HHHHhccCCCC-----C----CcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHh
Confidence 11222221110 0 01112346889999999999999999999999999988653
No 77
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.1e-43 Score=346.99 Aligned_cols=248 Identities=25% Similarity=0.351 Sum_probs=181.4
Q ss_pred cccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-CCCccccceeeecCCeeEEEEEecCCCCH
Q 010131 201 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 278 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL 278 (517)
+.||+|+||.||+|... +++.||||++... ....+.+|+.+++.+. ||||+++++++.+....++||||+++|+|
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~L 93 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGEL 93 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCBH
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCcH
Confidence 67999999999999886 6899999998643 3467788999999996 99999999999999999999999999999
Q ss_pred HhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC---cEEEccccCccccCCCCcccc
Q 010131 279 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAKVSDFGLSRQAEEDLTHIS 355 (517)
Q Consensus 279 ~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~---~~kl~Dfg~a~~~~~~~~~~~ 355 (517)
.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||+++........ .
T Consensus 94 ~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~ 166 (325)
T 3kn6_A 94 FERIKK---KKHFSETEASYIMRKLVSAVSHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-L 166 (325)
T ss_dssp HHHHHH---CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-c
Confidence 999984 4679999999999999999999999 9999999999999997765 8999999999865443222 2
Q ss_pred cccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCcccc-ccHHHHHHHHHhcCCcccccCccccCCC
Q 010131 356 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVLIGNV 434 (517)
Q Consensus 356 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 434 (517)
....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.... ....+ ....+..+.... . ...
T Consensus 167 ~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~-~~~~i~~~~~~~--~----~~~ 239 (325)
T 3kn6_A 167 KTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVE-IMKKIKKGDFSF--E----GEA 239 (325)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHH-HHHHHTTTCCCC--C----SHH
T ss_pred cccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHH-HHHHHHcCCCCC--C----ccc
Confidence 334579999999999999999999999999999999999999975443211 12222 223333332210 0 000
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 435 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 435 ~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.......+.+++.+||+.||++|||++|+++
T Consensus 240 ~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 240 WKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp HHTSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred ccCCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 0112346889999999999999999999864
No 78
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.3e-43 Score=351.54 Aligned_cols=249 Identities=23% Similarity=0.337 Sum_probs=202.5
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 270 (517)
..|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 35667899999999999999876 58899999986432 234567889999999999999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+.+|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++......
T Consensus 95 e~~~gg~L~~~l~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 168 (384)
T 4fr4_A 95 DLLLGGDLRYHLQ---QNVHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE 168 (384)
T ss_dssp CCCTTEEHHHHHH---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred ecCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEECCCCCEEEeccceeeeccCC
Confidence 9999999999998 45679999999999999999999999 99999999999999999999999999999876543
Q ss_pred CcccccccccCCCCcCCCccCC---CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccC
Q 010131 351 LTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 427 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 427 (517)
. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||........... ... +.....
T Consensus 169 ~--~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~---~~~-~~~~~~----- 237 (384)
T 4fr4_A 169 T--QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEI---VHT-FETTVV----- 237 (384)
T ss_dssp C--CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHH---HHH-HHHCCC-----
T ss_pred C--ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHH---HHH-Hhhccc-----
Confidence 2 2344569999999999864 4589999999999999999999999974433322221 111 111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCC-HHHHHH
Q 010131 428 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPK-MQEIVL 465 (517)
Q Consensus 428 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs-~~evl~ 465 (517)
.++......+.+++.+||+.||.+||+ +++|++
T Consensus 238 -----~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 238 -----TYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp -----CCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred -----CCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 011112346889999999999999998 666654
No 79
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=1.9e-43 Score=341.05 Aligned_cols=259 Identities=26% Similarity=0.430 Sum_probs=211.2
Q ss_pred HHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
...|++.+.||+|+||.||+|...+++.||||++.... ...+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 89 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYM 89 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEEEecC
Confidence 34667789999999999999999888899999997543 345789999999999999999999999874 4589999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcc
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 353 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 353 (517)
++++|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.........
T Consensus 90 ~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 165 (279)
T 1qpc_A 90 ENGSLVDFLKTP-SGIKLTINKLLDMAAQIAEGMAFIEE---RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT 165 (279)
T ss_dssp TTCBHHHHTTSH-HHHTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE
T ss_pred CCCCHHHHHhcC-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc
Confidence 999999999742 12368999999999999999999999 99999999999999999999999999999877654333
Q ss_pred cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 354 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
......++..|+|||.+.+..++.++||||||+++|||++ |+.||...... +.. ..+..+... ..
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~------~~~-~~~~~~~~~-----~~-- 231 (279)
T 1qpc_A 166 AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP------EVI-QNLERGYRM-----VR-- 231 (279)
T ss_dssp CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------HHH-HHHHTTCCC-----CC--
T ss_pred cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHH------HHH-HHHhcccCC-----CC--
Confidence 3334456789999999988889999999999999999999 99999743221 111 122222110 00
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
....+..+.+++.+||+.||++|||++++++.|+++....
T Consensus 232 --~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 271 (279)
T 1qpc_A 232 --PDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTAT 271 (279)
T ss_dssp --CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred --cccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHhc
Confidence 1122346889999999999999999999999999987653
No 80
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=1.3e-44 Score=357.45 Aligned_cols=267 Identities=25% Similarity=0.371 Sum_probs=210.8
Q ss_pred HHHhhhcccCCCCceEEEEEEe-----cCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeee--cCCeeE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRI 267 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~ 267 (517)
..|++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++. +....+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 4566789999999999999984 358899999998776666778999999999999999999999886 455688
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
+||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 103 lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRH--RARLDASRLLLYSSQICKGMEYLGS---RRCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEECCTTCBHHHHHHHH--GGGCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEeecCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChhhEEECCCCCEEEcccccceec
Confidence 999999999999999753 3469999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcc--cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCcc--------ccccHHHHHHHHH
Q 010131 348 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG--------AELNIVHWARSMI 417 (517)
Q Consensus 348 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~--------~~~~~~~~~~~~~ 417 (517)
...... ......++..|+|||.+.+..++.++||||||+++|+|++|+.||...... ............+
T Consensus 178 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (327)
T 3lxl_A 178 PLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL 257 (327)
T ss_dssp CTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH
T ss_pred ccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh
Confidence 543321 223345788899999999888999999999999999999999998632211 0001111112222
Q ss_pred hcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 418 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 418 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
..+.. ..........+.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 258 ~~~~~---------~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~~ 306 (327)
T 3lxl_A 258 EEGQR---------LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGSR 306 (327)
T ss_dssp HTTCC---------CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-----
T ss_pred hcccC---------CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 22211 11122234568899999999999999999999999998876544
No 81
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.9e-42 Score=341.98 Aligned_cols=268 Identities=25% Similarity=0.394 Sum_probs=206.0
Q ss_pred hHHHHHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcC--CCCCccccceeeecC----
Q 010131 190 PELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI--HHRNLVPLIGYCEEE---- 263 (517)
Q Consensus 190 ~~l~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~h~niv~~~~~~~~~---- 263 (517)
.+.....|.+.+.||+|+||.||+|++. ++.||||++... ....+..|.+++..+ +||||+++++++...
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT---EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc---ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 3445667888999999999999999987 899999998643 334555666666655 899999999998876
Q ss_pred CeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCC--------CcEecCCCCCCeEeCCCCc
Q 010131 264 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP--------GIIHRDVKSSNILLDINMR 335 (517)
Q Consensus 264 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~--------~ivH~dlk~~Nill~~~~~ 335 (517)
...++||||+++|+|.+++.. ..+++..++.++.|++.||+|||+ . +|+||||||+||+++.++.
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~~~~ivH~Dikp~Nill~~~~~ 180 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKS----TTLDAKSMLKLAYSSVSGLCHLHT---EIFSTQGKPAIAHRDLKSKNILVKKNGT 180 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHS---CBCSTTCBCCEECSCCCGGGEEECTTSC
T ss_pred CceEEEEeccCCCcHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHHH---hhhhhccCCCEEecccchHHEEECCCCC
Confidence 678999999999999999963 469999999999999999999998 6 9999999999999999999
Q ss_pred EEEccccCccccCCCCccc---ccccccCCCCcCCCccCCCCCCcc------ceehhHHHHHHHHHhC----------CC
Q 010131 336 AKVSDFGLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQQLTEK------SDVYSFGVVLLELISG----------KK 396 (517)
Q Consensus 336 ~kl~Dfg~a~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~------~Dv~slG~~l~elltg----------~~ 396 (517)
+||+|||++.......... .....||+.|+|||++.+...+.+ +|||||||++|||+|| +.
T Consensus 181 ~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~ 260 (337)
T 3mdy_A 181 CCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQL 260 (337)
T ss_dssp EEECCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCC
T ss_pred EEEEeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccc
Confidence 9999999997664432221 123468999999999987766665 9999999999999999 66
Q ss_pred CCCCCCccccccHHHHHHHHHhcCCcccccCccccCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 397 PVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 397 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
||....... ..... .......... .+..... ........+.+++.+||+.||++|||++||++.|+++.+..
T Consensus 261 p~~~~~~~~-~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~~~~ 333 (337)
T 3mdy_A 261 PYHDLVPSD-PSYED-MREIVCIKKL----RPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSESQ 333 (337)
T ss_dssp TTTTTSCSS-CCHHH-HHHHHTTSCC----CCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cHhhhcCCC-Cchhh-hHHHHhhhcc----CccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHHHhhc
Confidence 665322211 11111 1222211111 1111111 12356778999999999999999999999999999988754
No 82
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=7.1e-43 Score=338.67 Aligned_cols=259 Identities=19% Similarity=0.278 Sum_probs=197.7
Q ss_pred HhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 197 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
|.+.+.||+|+||+||+|...+|+.||+|++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (288)
T 1ob3_A 4 YHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD 83 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred chhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecC
Confidence 556789999999999999998899999999865432 224678899999999999999999999999999999999997
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCccc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 354 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 354 (517)
+ +|.+++... ...+++..+..++.|++.||+|||+ ++|+||||||+||+++.++.+||+|||++.........
T Consensus 84 ~-~l~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 156 (288)
T 1ob3_A 84 Q-DLKKLLDVC--EGGLESVTAKSFLLQLLNGIAYCHD---RRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK- 156 (288)
T ss_dssp E-EHHHHHHTS--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred C-CHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc-
Confidence 5 899888742 4678999999999999999999999 99999999999999999999999999999875432221
Q ss_pred ccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc--------cc
Q 010131 355 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI--------SI 425 (517)
Q Consensus 355 ~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~ 425 (517)
.....+|+.|+|||++.+ ..++.++|||||||++|||++|+.||...+..+ ....+.......... ..
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T 1ob3_A 157 YTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD---QLMRIFRILGTPNSKNWPNVTELPK 233 (288)
T ss_dssp -----CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGSTT
T ss_pred cccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHHCCCChhhchhhhcccc
Confidence 223457999999999876 458999999999999999999999997433211 111111111111000 00
Q ss_pred cCcccc-------CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 426 VDPVLI-------GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 426 ~d~~l~-------~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.++... ..........+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 234 YDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp CCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 111110 0001122346789999999999999999999875
No 83
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.3e-42 Score=348.19 Aligned_cols=269 Identities=17% Similarity=0.233 Sum_probs=206.8
Q ss_pred HHHhhhcccCCCCceEEEEEEecC------CcEEEEEEecCCCchhH-----------HHHHHHHHHHhcCCCCCccccc
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCSHRT-----------QQFVTEVALLSRIHHRNLVPLI 257 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~h~niv~~~ 257 (517)
..|.+.+.||+|+||.||+|.+.. ++.||||++........ ..+..|+..+..++||||++++
T Consensus 35 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~ 114 (364)
T 3op5_A 35 AAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYW 114 (364)
T ss_dssp CEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEE
T ss_pred CeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEE
Confidence 356678999999999999998864 47899999875532111 1244566677788899999999
Q ss_pred eeeecC----CeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC--
Q 010131 258 GYCEEE----HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-- 331 (517)
Q Consensus 258 ~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~-- 331 (517)
+++... ...++||||+ +++|.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||++
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~--~~~~l~~~~~~~i~~qi~~~l~~lH~---~~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 115 GSGLHDKNGKSYRFMIMDRF-GSDLQKIYEA--NAKRFSRKTVLQLSLRILDILEYIHE---HEYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEETTEEEEEEEEECE-EEEHHHHHHH--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEESS
T ss_pred eeeeeccCCcceEEEEEeCC-CCCHHHHHHh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeEEecCCHHHEEEecC
Confidence 998764 4579999999 9999999975 24679999999999999999999999 9999999999999999
Q ss_pred CCCcEEEccccCccccCCCCccc------ccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccc
Q 010131 332 INMRAKVSDFGLSRQAEEDLTHI------SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA 405 (517)
Q Consensus 332 ~~~~~kl~Dfg~a~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~ 405 (517)
.++.+||+|||+++......... .....||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~- 267 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD- 267 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-
T ss_pred CCCeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-
Confidence 88999999999998764432211 12345899999999999999999999999999999999999999743221
Q ss_pred cccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 406 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
............ .....++++.+... ..+..+.+++..|++.+|++||++++|++.|+++.....
T Consensus 268 -~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~~~~~ 332 (364)
T 3op5_A 268 -PKYVRDSKIRYR-ENIASLMDKCFPAA---NAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGLKAIG 332 (364)
T ss_dssp -HHHHHHHHHHHH-HCHHHHHHHHSCTT---CCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred -HHHHHHHHHHhh-hhHHHHHHHhcccc---cCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHcC
Confidence 122222222221 12233333322111 123468899999999999999999999999999887644
No 84
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=1.2e-42 Score=344.49 Aligned_cols=265 Identities=24% Similarity=0.439 Sum_probs=212.5
Q ss_pred HHHHhhhcccCCCCceEEEEEEec--------CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcC-CCCCccccceeeecC
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEE 263 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~ 263 (517)
...|.+.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+++++++ +||||+++++++.+.
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 446677899999999999999863 467899999976533 3456789999999999 899999999999999
Q ss_pred CeeEEEEEecCCCCHHhHhhccCC-------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe
Q 010131 264 HQRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 330 (517)
Q Consensus 264 ~~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill 330 (517)
+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+||||||+||++
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLAS---QKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCccceEEE
Confidence 999999999999999999985431 2358999999999999999999999 999999999999999
Q ss_pred CCCCcEEEccccCccccCCCCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCcccccc
Q 010131 331 DINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELN 408 (517)
Q Consensus 331 ~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~ 408 (517)
+.++.+||+|||++......... ......+++.|+|||++.+..++.++||||||+++|||++ |+.||.....
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~----- 265 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV----- 265 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH-----
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH-----
Confidence 99999999999999876543221 1223346788999999988889999999999999999999 9999974322
Q ss_pred HHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 010131 409 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 477 (517)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 477 (517)
.+. ...+..+.... ........+.+++.+||+.||.+|||+.|+++.|+++.......
T Consensus 266 -~~~-~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~~~~~~~ 323 (334)
T 2pvf_A 266 -EEL-FKLLKEGHRMD---------KPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNE 323 (334)
T ss_dssp -HHH-HHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred -HHH-HHHHhcCCCCC---------CCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccccC
Confidence 111 12222222111 11122346889999999999999999999999999999876543
No 85
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.8e-43 Score=350.40 Aligned_cols=267 Identities=27% Similarity=0.413 Sum_probs=209.7
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCC-chhHHHHHHHHHHHhcC-CCCCccccceeeec
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE 262 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~ 262 (517)
++....|.+.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 344456777899999999999999862 45689999997543 23446799999999999 89999999999999
Q ss_pred CCeeEEEEEecCCCCHHhHhhccCC--------------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecC
Q 010131 263 EHQRILVYEYMHNGTLRDRLHGSVN--------------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRD 322 (517)
Q Consensus 263 ~~~~~lv~e~~~~gsL~~~l~~~~~--------------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~d 322 (517)
.+..++||||+++|+|.+++..... ...+++..++.++.|++.||+|||+ .+|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHH---TTEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCcccCC
Confidence 9999999999999999999975421 1348999999999999999999999 9999999
Q ss_pred CCCCCeEeCCCCcEEEccccCccccCCCCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCC
Q 010131 323 VKSSNILLDINMRAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSV 400 (517)
Q Consensus 323 lk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~ 400 (517)
|||+||+++.++.+||+|||++......... ......+|+.|+|||.+.+..++.++||||||+++|+|+| |..||..
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~ 277 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCccc
Confidence 9999999999999999999999876443221 2233457889999999988899999999999999999998 9999974
Q ss_pred CCccccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 401 EDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
..... . ....+..+.... .+......+.+++.+||+.||.+|||+.|+++.|+.+.....
T Consensus 278 ~~~~~--~----~~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 337 (344)
T 1rjb_A 278 IPVDA--N----FYKLIQNGFKMD---------QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAE 337 (344)
T ss_dssp CCCSH--H----HHHHHHTTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC----
T ss_pred CCcHH--H----HHHHHhcCCCCC---------CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHHHHH
Confidence 43221 1 122222221111 111123468899999999999999999999999998876544
No 86
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=8.3e-43 Score=336.89 Aligned_cols=258 Identities=28% Similarity=0.460 Sum_probs=205.4
Q ss_pred HHhhhcccCCCCceEEEEEEecC----CcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 270 (517)
.|.+.+.||+|+||.||+|.+.+ +..||+|++.... ....+.+.+|+.++++++||||+++++++.++ ..++||
T Consensus 13 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-~~~~v~ 91 (281)
T 3cc6_A 13 DVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEE-PTWIIM 91 (281)
T ss_dssp GEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSS-SCEEEE
T ss_pred ceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCC-CCEEEE
Confidence 45667899999999999998653 3469999987653 34557899999999999999999999998754 568999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++++|.+++... ...+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 92 e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 166 (281)
T 3cc6_A 92 ELYPYGELGHYLERN--KNSLKVLTLVLYSLQICKAMAYLES---INCVHRDIAVRNILVASPECVKLGDFGLSRYIEDE 166 (281)
T ss_dssp ECCTTCBHHHHHHHH--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---
T ss_pred ecCCCCCHHHHHHhc--cccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEECCCCcEEeCccCCCcccccc
Confidence 999999999999753 4568999999999999999999999 99999999999999999999999999999876554
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
.........+++.|+|||.+.+..++.++||||||+++|+|+| |+.||....... ... .+..+.....
T Consensus 167 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~---~~~----~~~~~~~~~~---- 235 (281)
T 3cc6_A 167 DYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD---VIG----VLEKGDRLPK---- 235 (281)
T ss_dssp ------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGG---HHH----HHHHTCCCCC----
T ss_pred cccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHH---HHH----HHhcCCCCCC----
Confidence 3333344457889999999988889999999999999999998 999997433221 221 1222211111
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
.......+.+++.+||+.||++|||+.|+++.|+++.+.+.
T Consensus 236 -----~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 276 (281)
T 3cc6_A 236 -----PDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVYQMEK 276 (281)
T ss_dssp -----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHHHhhh
Confidence 11123468899999999999999999999999999887653
No 87
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.9e-42 Score=343.98 Aligned_cols=269 Identities=25% Similarity=0.403 Sum_probs=213.2
Q ss_pred hhHHHHHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhc--CCCCCccccceeeecCC--
Q 010131 189 LPELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH-- 264 (517)
Q Consensus 189 ~~~l~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~-- 264 (517)
..+.....|.+.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 36 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~ 111 (342)
T 1b6c_B 36 VQRTIARTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT 111 (342)
T ss_dssp HHHHHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS
T ss_pred ecccccccEEEEeeecCCCCcEEEEEEEc-CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc
Confidence 34556678888999999999999999985 899999998643 34677889999887 68999999999998775
Q ss_pred --eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHh--------cCCCCCcEecCCCCCCeEeCCCC
Q 010131 265 --QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINM 334 (517)
Q Consensus 265 --~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH--------~~~~~~ivH~dlk~~Nill~~~~ 334 (517)
..++||||+++|+|.+++.. ..+++..++.++.|++.||+||| + .+|+||||||+||+++.++
T Consensus 112 ~~~~~lv~e~~~~g~L~~~l~~----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 112 WTQLWLVSDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CCCEEEEECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCB---CEEECSCCSGGGEEECTTS
T ss_pred cceeEEEEeecCCCcHHHHHhc----cCccHHHHHHHHHHHHHHHHHHHHHHhhhccc---CCeeeCCCCHHHEEECCCC
Confidence 78999999999999999973 46999999999999999999999 7 8999999999999999999
Q ss_pred cEEEccccCccccCCCCcc---cccccccCCCCcCCCccCCC------CCCccceehhHHHHHHHHHhC----------C
Q 010131 335 RAKVSDFGLSRQAEEDLTH---ISSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------K 395 (517)
Q Consensus 335 ~~kl~Dfg~a~~~~~~~~~---~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg----------~ 395 (517)
.+||+|||++......... ......||+.|+|||.+.+. .++.++|||||||++|||+|| .
T Consensus 185 ~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~ 264 (342)
T 1b6c_B 185 TCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQ 264 (342)
T ss_dssp CEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCC
T ss_pred CEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccc
Confidence 9999999999876543322 12344689999999998765 334789999999999999999 7
Q ss_pred CCCCCCCccccccHHHHHHHHHhcCCcccccCccccCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 396 KPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 396 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.||...... ......+... +..... .+.+... ...+....+.+++.+||+.||++|||++||++.|+++.+..
T Consensus 265 ~p~~~~~~~-~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i~~~~ 338 (342)
T 1b6c_B 265 LPYYDLVPS-DPSVEEMRKV-VCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 338 (342)
T ss_dssp CTTTTTSCS-SCCHHHHHHH-HTTSCC----CCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHHHHTT
T ss_pred cCccccCcC-cccHHHHHHH-HHHHHh----CCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHHHHHh
Confidence 787633222 1222222222 221111 1111111 12356678999999999999999999999999999987654
No 88
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.1e-42 Score=351.97 Aligned_cols=265 Identities=20% Similarity=0.273 Sum_probs=201.8
Q ss_pred HHhhhcccCCC--CceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEE
Q 010131 196 TNNFCKKIGKG--SFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 196 ~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 270 (517)
.|++.+.||+| +||+||+|+.. +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||
T Consensus 26 ~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 105 (389)
T 3gni_B 26 CYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT 105 (389)
T ss_dssp GEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEE
Confidence 46678999999 99999999987 69999999997543 234567888999999999999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++|+|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||.+......
T Consensus 106 e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~ 181 (389)
T 3gni_B 106 SFMAYGSAKDLICTH-FMDGMNELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMISH 181 (389)
T ss_dssp ECCTTCBHHHHHHHT-CTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCGGGCEECEET
T ss_pred EccCCCCHHHHHhhh-cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccccceeeccc
Confidence 999999999999754 23569999999999999999999999 99999999999999999999999999988654221
Q ss_pred Cc------ccccccccCCCCcCCCccCC--CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc---
Q 010131 351 LT------HISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK--- 419 (517)
Q Consensus 351 ~~------~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 419 (517)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...+.... ...........
T Consensus 182 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~ 259 (389)
T 3gni_B 182 GQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM--LLEKLNGTVPCLLD 259 (389)
T ss_dssp TEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH--HHHC----------
T ss_pred cccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH--HHHHhcCCCCcccc
Confidence 11 11222358889999999987 6789999999999999999999999974332211 11100000000
Q ss_pred ------CC-------------cccccC---cc------ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 420 ------GD-------------VISIVD---PV------LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 420 ------~~-------------~~~~~d---~~------l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
.. ..+... +. ............+.+++.+||+.||++|||++|+++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~h 334 (389)
T 3gni_B 260 TSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 334 (389)
T ss_dssp ----------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTS
T ss_pred ccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcC
Confidence 00 000000 00 0000112233468899999999999999999999864
No 89
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.2e-42 Score=333.65 Aligned_cols=252 Identities=21% Similarity=0.363 Sum_probs=204.3
Q ss_pred HHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecC--CeeEEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE--HQRILVY 270 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~--~~~~lv~ 270 (517)
..|.+.+.||+|+||.||+|+++ ++.||||++.... ....+.+.+|+.++++++||||+++++++.+. +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 35667889999999999999986 8999999997543 33456799999999999999999999999876 7789999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--cEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+ ++||||||+||+++.++.++|+|||++....
T Consensus 89 e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~ 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEG-TNFVVDQSQAVKFALDMARGMAFLHT---LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ 164 (271)
T ss_dssp ECCTTCBHHHHHHSC-SSCCCCHHHHHHHHHHHHHHHHHHTT---SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS
T ss_pred cccCCCcHHHHHhhc-ccCCCCHHHHHHHHHHHHHHHHHHhc---CCCceecCCCccceEEEcCCcceeEEeccceeeec
Confidence 999999999999853 23368999999999999999999998 88 9999999999999999999999988876533
Q ss_pred CCCcccccccccCCCCcCCCccCCCCCCc---cceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 349 EDLTHISSVARGTVGYLDPEYYGNQQLTE---KSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 349 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~---~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
. ....||+.|+|||.+.+...+. ++||||||+++|||++|+.||..... .+........+....
T Consensus 165 ~------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~------~~~~~~~~~~~~~~~- 231 (271)
T 3kmu_A 165 S------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSN------MEIGMKVALEGLRPT- 231 (271)
T ss_dssp C------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCH------HHHHHHHHHSCCCCC-
T ss_pred c------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccCh------HHHHHHHHhcCCCCC-
Confidence 2 2234789999999998765544 79999999999999999999973322 111222222221111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 426 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 426 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
. +......+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 232 ----~----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 232 ----I----PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp ----C----CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred ----C----CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 1 11223468899999999999999999999999998753
No 90
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-42 Score=339.47 Aligned_cols=243 Identities=22% Similarity=0.365 Sum_probs=202.6
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|..+++.++||||+++++++.+.+..++|||
T Consensus 7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e 86 (318)
T 1fot_A 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMD 86 (318)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEEC
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEe
Confidence 4566789999999999999876 68999999997532 2345678899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~- 159 (318)
T 1fot_A 87 YIEGGELFSLLRK---SQRFPNPVAKFYAAEVCLALEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV- 159 (318)
T ss_dssp CCCSCBHHHHHHH---TSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC-
T ss_pred CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChheEEEcCCCCEEEeecCcceecCCc-
Confidence 9999999999974 4578999999999999999999999 99999999999999999999999999999876432
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. ......... +.. ..
T Consensus 160 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~------~~~~~~i~~-~~~------~~- 222 (318)
T 1fot_A 160 ---TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNT------MKTYEKILN-AEL------RF- 222 (318)
T ss_dssp ---BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHH-CCC------CC-
T ss_pred ---cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHh-CCC------CC-
Confidence 2345689999999999999999999999999999999999999974321 122222222 211 01
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 465 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 465 (517)
+......+.+++.+||+.||++|| +++|+++
T Consensus 223 ---p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 223 ---PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp ---CTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 111223678999999999999999 8888874
No 91
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-42 Score=349.24 Aligned_cols=250 Identities=21% Similarity=0.341 Sum_probs=205.2
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
.|.+.+.||+|+||.||+|... +|+.||+|++..........+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 52 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~ 131 (387)
T 1kob_A 52 YYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLS 131 (387)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCC
T ss_pred ceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCC
Confidence 4667889999999999999876 689999999987655566789999999999999999999999999999999999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC--CCcEEEccccCccccCCCCc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+|+|.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||++. ++.+||+|||++........
T Consensus 132 gg~L~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 132 GGELFDRIAA--EDYKMSEAEVINYMRQACEGLKHMHE---HSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCBHHHHTTC--TTCCBCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCcHHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 9999999874 23479999999999999999999999 99999999999999974 57799999999987654322
Q ss_pred ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 353 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+...... ..... .++...
T Consensus 207 --~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~------~~~~~~i~-~~~~~--~~~~~~- 274 (387)
T 1kob_A 207 --VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDD------LETLQNVK-RCDWE--FDEDAF- 274 (387)
T ss_dssp --EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHHHH-HCCCC--CCSSTT-
T ss_pred --eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCH------HHHHHHHH-hCCCC--CCcccc-
Confidence 2234589999999999999999999999999999999999999974322 11122211 11110 111111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
......+.+++.+||+.||++|||+.|+++
T Consensus 275 ---~~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 275 ---SSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp ---TTSCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ---ccCCHHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 112346789999999999999999999986
No 92
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-42 Score=338.36 Aligned_cols=258 Identities=22% Similarity=0.320 Sum_probs=199.4
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCch---hHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH---RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|... +++.||+|++...... ..+.+.+|+.++++++||||+++++++..++..++|||
T Consensus 35 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 2h34_A 35 PYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMR 114 (309)
T ss_dssp CEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEE
Confidence 4667899999999999999876 6889999998754322 34678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 115 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 115 LINGVDLAAMLRR---QGPLAPPRAVAIVRQIGSALDAAHA---AGATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp CCCCEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred ecCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CcCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 9999999999974 3579999999999999999999999 999999999999999999999999999998765543
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc-ccccCccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV-ISIVDPVL 430 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~~l 430 (517)
........|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ......+..... .....
T Consensus 189 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-------~~~~~~~~~~~~~~~~~~--- 258 (309)
T 2h34_A 189 LTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQL-------SVMGAHINQAIPRPSTVR--- 258 (309)
T ss_dssp --------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHH-------HHHHHHHHSCCCCGGGTS---
T ss_pred cccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchH-------HHHHHHhccCCCCccccC---
Confidence 3333345689999999999999999999999999999999999999973321 112222222111 11111
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHHHhhhhhh
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSIKIE 474 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RP-s~~evl~~L~~~~~~~ 474 (517)
...+..+.+++.+||+.||++|| +++++++.|+......
T Consensus 259 -----~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~ 298 (309)
T 2h34_A 259 -----PGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATA 298 (309)
T ss_dssp -----TTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC--
T ss_pred -----CCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhh
Confidence 11223688999999999999999 9999999999876553
No 93
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.2e-42 Score=337.76 Aligned_cols=260 Identities=21% Similarity=0.278 Sum_probs=198.6
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
|++.+.||+|+||+||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.+++..++||||+
T Consensus 4 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 83 (292)
T 3o0g_A 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFC 83 (292)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred ceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecC
Confidence 556789999999999999886 68999999997543 233477889999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcc
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 353 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 353 (517)
++ ++.+.+.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 84 ~~-~l~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~---~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 84 DQ-DLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHS---RNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp SE-EHHHHHHH--TTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred CC-CHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 75 55555543 35679999999999999999999999 9999999999999999999999999999987654322
Q ss_pred cccccccCCCCcCCCccCCCC-CCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc------cc
Q 010131 354 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS------IV 426 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 426 (517)
......||+.|+|||++.+.. ++.++|||||||++|+|++|..||..... .......+........... ..
T Consensus 157 ~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~ 234 (292)
T 3o0g_A 157 CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGND--VDDQLKRIFRLLGTPTEEQWPSMTKLP 234 (292)
T ss_dssp CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSS--HHHHHHHHHHHHCCCCTTTCTTGGGST
T ss_pred cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCC--HHHHHHHHHHHhCCCChhhhhhhcccc
Confidence 223345899999999987765 79999999999999999999888642221 1111111211111110000 00
Q ss_pred C---------ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 427 D---------PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 427 d---------~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+ ..............+.+++.+||+.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 235 DYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred cccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0 00000111223446789999999999999999999976
No 94
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=3e-42 Score=346.10 Aligned_cols=251 Identities=24% Similarity=0.323 Sum_probs=200.3
Q ss_pred hcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCCCCH
Q 010131 200 CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTL 278 (517)
Q Consensus 200 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 278 (517)
.+.||+|+||.||+|... +|+.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 467999999999999875 6899999999876556677899999999999999999999999999999999999999999
Q ss_pred HhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe--CCCCcEEEccccCccccCCCCccccc
Q 010131 279 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL--DINMRAKVSDFGLSRQAEEDLTHISS 356 (517)
Q Consensus 279 ~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill--~~~~~~kl~Dfg~a~~~~~~~~~~~~ 356 (517)
.+++.. ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||+++....... ..
T Consensus 174 ~~~l~~--~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~~ 246 (373)
T 2x4f_A 174 FDRIID--ESYNLTELDTILFMKQICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--LK 246 (373)
T ss_dssp HHHHHH--TGGGCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--CC
T ss_pred HHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--cc
Confidence 998864 23568999999999999999999999 999999999999999 6678999999999987654322 22
Q ss_pred ccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCCCH
Q 010131 357 VARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 436 (517)
Q Consensus 357 ~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 436 (517)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+........... ..++ ...
T Consensus 247 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~~~~~~--~~~~-~~~---- 313 (373)
T 2x4f_A 247 VNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND------AETLNNILACRWD--LEDE-EFQ---- 313 (373)
T ss_dssp CCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH------HHHHHHHHHTCCC--SCSG-GGT----
T ss_pred cccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhccCC--CChh-hhc----
Confidence 34589999999999999999999999999999999999999974332 1122222221110 0010 011
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCHHHHHH--HHHhh
Q 010131 437 ESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDS 470 (517)
Q Consensus 437 ~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~~ 470 (517)
.....+.+++.+||+.||++|||++|+++ .+++.
T Consensus 314 ~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~ 349 (373)
T 2x4f_A 314 DISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH 349 (373)
T ss_dssp TSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred cCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence 12346889999999999999999999987 55544
No 95
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=2.8e-42 Score=338.05 Aligned_cols=265 Identities=22% Similarity=0.310 Sum_probs=202.5
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 112 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLE 112 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEe
Confidence 4677899999999999999874 78999999997532 3345678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 272 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
|+++++|.+++.... ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 113 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~ 189 (310)
T 2wqm_A 113 LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK 189 (310)
T ss_dssp CCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCC---------
T ss_pred cCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCC
Confidence 999999999986432 35678999999999999999999999 99999999999999999999999999998876443
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ....... .+..........
T Consensus 190 ~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~-~~~~~~~~~~~~--- 260 (310)
T 2wqm_A 190 TTA-AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCK-KIEQCDYPPLPS--- 260 (310)
T ss_dssp ----------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---C----CHHHHHH-HHHTTCSCCCCT---
T ss_pred Ccc-ccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccch----hHHHHHH-HhhcccCCCCcc---
Confidence 221 2234589999999999999999999999999999999999999974322 1222222 222222211111
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 477 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 477 (517)
......+.+++.+||+.||++|||+++|++.|+++......+
T Consensus 261 -----~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~~ 302 (310)
T 2wqm_A 261 -----DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTASS 302 (310)
T ss_dssp -----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC--
T ss_pred -----cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhhh
Confidence 112336889999999999999999999999999998876543
No 96
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=3.8e-43 Score=340.71 Aligned_cols=263 Identities=29% Similarity=0.534 Sum_probs=198.4
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEE
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 268 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 268 (517)
|+....|.+.++||+|+||+||+|.+. ..||||+++... ....+.+.+|++++++++||||+++++++. .+..++
T Consensus 20 ei~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~l 96 (289)
T 3og7_A 20 EIPDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-APQLAI 96 (289)
T ss_dssp BCCTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEE
T ss_pred ccCccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc-CCccEE
Confidence 555566778899999999999999875 359999987543 234577999999999999999999999664 456899
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
||||+++++|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 97 v~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 171 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHA--SETKFEMKKLIDIARQTARGMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKS 171 (289)
T ss_dssp EEECCCEEEHHHHHTT--C---CCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTEEEECCCC------
T ss_pred EEEecCCCcHHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEECCCCCEEEccceeccccc
Confidence 9999999999999964 34679999999999999999999999 999999999999999999999999999997654
Q ss_pred CCC-cccccccccCCCCcCCCccC---CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 349 EDL-THISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 349 ~~~-~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
... ........||+.|+|||.+. +..++.++||||||+++|+|++|+.||...... +........+....
T Consensus 172 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~~~~~~~~~~~~ 245 (289)
T 3og7_A 172 RWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNR------DQIIEMVGRGSLSP 245 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCH------HHHHHHHHHTSCCC
T ss_pred cccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchH------HHHHHHhcccccCc
Confidence 321 12223345899999999986 667888999999999999999999999743221 11222222222211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
... ......+..+.+++.+||+.||++|||++|+++.|+++.+
T Consensus 246 ~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 246 DLS-----KVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp CTT-----SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred chh-----hccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 111 1112233578899999999999999999999999998753
No 97
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=352.59 Aligned_cols=272 Identities=22% Similarity=0.301 Sum_probs=215.6
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCC--eeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~lv~e 271 (517)
.|.+.+.||+|+||+||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 10 ~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e 89 (396)
T 4eut_A 10 LWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIME 89 (396)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEC
T ss_pred ceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEe
Confidence 4556789999999999999887 58999999997543 234577889999999999999999999987655 6799999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe----CCCCcEEEccccCcccc
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSDFGLSRQA 347 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~Dfg~a~~~ 347 (517)
|+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||+++..
T Consensus 90 ~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~ 166 (396)
T 4eut_A 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRE---NGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166 (396)
T ss_dssp CCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEEC
T ss_pred cCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCcCHHHEEEeecCCCceeEEEecCCCceEc
Confidence 99999999999865444559999999999999999999999 999999999999999 77888999999999876
Q ss_pred CCCCcccccccccCCCCcCCCccCC--------CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc
Q 010131 348 EEDLTHISSVARGTVGYLDPEYYGN--------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 419 (517)
Q Consensus 348 ~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 419 (517)
..... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+.+...+..
T Consensus 167 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~--~~~~~~~~~~~ 242 (396)
T 4eut_A 167 EDDEQ--FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRR--NKEVMYKIITG 242 (396)
T ss_dssp CCGGG--SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTT--CHHHHHHHHHS
T ss_pred cCCCc--cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccc--hHHHHHHHhcC
Confidence 54322 233458999999998764 5678899999999999999999999974332211 12222233322
Q ss_pred CCccc---c----------c-CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 420 GDVIS---I----------V-DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 420 ~~~~~---~----------~-d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
..... . . +..............+.+++.+||+.||++||+++|+++.+++++...
T Consensus 243 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il~~~ 311 (396)
T 4eut_A 243 KPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDILHRM 311 (396)
T ss_dssp CCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHHTCE
T ss_pred CCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHhhce
Confidence 11100 0 0 001112345677788999999999999999999999999999988653
No 98
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-43 Score=347.05 Aligned_cols=245 Identities=23% Similarity=0.315 Sum_probs=199.8
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 89 (336)
T 3h4j_B 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIE 89 (336)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEE
Confidence 4566789999999999999974 78999999986432 1223578899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+ +|+|.+++.. ...+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~-~g~l~~~l~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~ 162 (336)
T 3h4j_B 90 YA-GGELFDYIVE---KKRMTEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN 162 (336)
T ss_dssp CC-CEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB
T ss_pred CC-CCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc
Confidence 99 7899998874 4579999999999999999999999 999999999999999999999999999998765432
Q ss_pred cccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
. .....||+.|+|||.+.+..+ +.++|||||||++|+|++|+.||.......... .+..+.
T Consensus 163 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~-------~i~~~~--------- 224 (336)
T 3h4j_B 163 F--LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFK-------KVNSCV--------- 224 (336)
T ss_dssp T--TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBC-------CCCSSC---------
T ss_pred c--cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHH-------HHHcCC---------
Confidence 2 234468999999999988776 789999999999999999999997443221110 000000
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
...+......+.+++.+||+.||.+|||++|+++.
T Consensus 225 -~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 225 -YVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp -CCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred -CCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 00111123467899999999999999999999863
No 99
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.1e-42 Score=345.43 Aligned_cols=248 Identities=23% Similarity=0.343 Sum_probs=199.0
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 270 (517)
.|.+.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|..++.++ +||||+++++++.+.+..++||
T Consensus 10 ~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~ 89 (345)
T 3a8x_A 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 89 (345)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred heEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEE
Confidence 4566789999999999999986 58899999997542 23446688999999988 8999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 90 e~~~gg~L~~~l~~---~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~ 163 (345)
T 3a8x_A 90 EYVNGGDLMFHMQR---QRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 163 (345)
T ss_dssp CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCT
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEEeccccccccCC
Confidence 99999999999974 3579999999999999999999999 99999999999999999999999999999864322
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCcccc--ccHHHHHHHHHhcCCcccccCc
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE--LNIVHWARSMIKKGDVISIVDP 428 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~d~ 428 (517)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..........+..+...
T Consensus 164 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~----- 237 (345)
T 3a8x_A 164 GD-TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR----- 237 (345)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCC-----
T ss_pred CC-cccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCC-----
Confidence 21 23345689999999999999999999999999999999999999964322111 11112222223222211
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCH
Q 010131 429 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM 460 (517)
Q Consensus 429 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~ 460 (517)
+ +......+.+++.+||+.||++||++
T Consensus 238 -~----p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 238 -I----PRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp -C----CTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred -C----CCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 1 11122367899999999999999996
No 100
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.7e-43 Score=347.45 Aligned_cols=259 Identities=21% Similarity=0.282 Sum_probs=192.9
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-CCCccccceeee--------cC
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCE--------EE 263 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~--------~~ 263 (517)
..+|++.+.||+|+||.||+|.+. +++.||||++........+.+.+|+.++.++. ||||+++++++. ..
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~ 106 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQ 106 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCC
Confidence 345677899999999999999875 68999999987666666778999999999996 999999999983 34
Q ss_pred CeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--cEecCCCCCCeEeCCCCcEEEccc
Q 010131 264 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLDINMRAKVSDF 341 (517)
Q Consensus 264 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~dlk~~Nill~~~~~~kl~Df 341 (517)
...++||||+. |+|.+++........+++..++.++.|++.||+|||+ .+ |+||||||+|||++.++.+||+||
T Consensus 107 ~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~---~~~~ivH~Dikp~NIl~~~~~~~kl~Df 182 (337)
T 3ll6_A 107 AEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR---QKPPIIHRDLKVENLLLSNQGTIKLCDF 182 (337)
T ss_dssp EEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT---SSSCCBCCCCCGGGCEECTTSCEEBCCC
T ss_pred ceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCEEEccCCcccEEECCCCCEEEecC
Confidence 45789999995 7999988765456679999999999999999999999 88 999999999999999999999999
Q ss_pred cCccccCCCCccc-----------ccccccCCCCcCCCcc---CCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccc
Q 010131 342 GLSRQAEEDLTHI-----------SSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL 407 (517)
Q Consensus 342 g~a~~~~~~~~~~-----------~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~ 407 (517)
|++.......... .....||+.|+|||++ .+..++.++|||||||++|+|++|+.||.......
T Consensus 183 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~-- 260 (337)
T 3ll6_A 183 GSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAKLR-- 260 (337)
T ss_dssp TTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC---------
T ss_pred ccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhHHH--
Confidence 9998765432211 1134589999999998 56778999999999999999999999996322110
Q ss_pred cHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 408 NIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 408 ~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
... +.... .........+.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 261 ----~~~-----~~~~~--------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~~~~~ 311 (337)
T 3ll6_A 261 ----IVN-----GKYSI--------PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIAAARN 311 (337)
T ss_dssp --------------CCC--------CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHHTT
T ss_pred ----hhc-----CcccC--------CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhccC
Confidence 000 00000 0000111247799999999999999999999999999887544
No 101
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.2e-43 Score=349.33 Aligned_cols=250 Identities=24% Similarity=0.352 Sum_probs=199.3
Q ss_pred HHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcC-CCCCccccceeeecCCee
Q 010131 192 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 192 l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~ 266 (517)
+....|++.+.||+|+||.||+|+.+ +|+.||||++.+.. ....+.+.+|..+++.+ +||||+++++++.+.+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 33345677899999999999999876 58999999997532 23456688999999988 799999999999999999
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.
T Consensus 100 ~lv~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NILl~~~g~ikL~DFG~a~~ 173 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQK---SRRFDEARARFYAAEIISALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKE 173 (353)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBC
T ss_pred EEEEeCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCcccCCCHHHEEECCCCCEEEccccceee
Confidence 999999999999999974 4579999999999999999999999 9999999999999999999999999999986
Q ss_pred cCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
..... .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+...... .+...
T Consensus 174 ~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~-~~~~~--- 242 (353)
T 3txo_A 174 GICNG-VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENE------DDLFEAIL-NDEVV--- 242 (353)
T ss_dssp SCC----------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-HCCCC---
T ss_pred cccCC-ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCH------HHHHHHHH-cCCCC---
Confidence 43322 123345699999999999988899999999999999999999999974332 12122222 22110
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCH------HHHHH
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKM------QEIVL 465 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~------~evl~ 465 (517)
++......+.+++.+||+.||++||++ +|+++
T Consensus 243 -------~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 243 -------YPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp -------CCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred -------CCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 011122357899999999999999998 67765
No 102
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=5.9e-42 Score=333.25 Aligned_cols=264 Identities=22% Similarity=0.303 Sum_probs=207.8
Q ss_pred HHHhhhcccCCCCceEEEEEEe-cCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceee-ecCCeeEEEEEe
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYEY 272 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~ 272 (517)
..|.+.+.||+|+||.||+|+. .+++.||||++..... .+.+.+|+.+++.++|++++..++++ ...+..++||||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 86 (296)
T 4hgt_A 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMEL 86 (296)
T ss_dssp --CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEEC
T ss_pred CceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEc
Confidence 4577789999999999999987 4789999998754322 23578899999999988887777766 566778999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe---CCCCcEEEccccCccccCC
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~ 349 (517)
+ +++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++.....
T Consensus 87 ~-~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 87 L-GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp C-CCBHHHHHHHT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred c-CCCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 9 99999998742 4569999999999999999999999 999999999999999 7889999999999987654
Q ss_pred CCcc------cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 010131 350 DLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 423 (517)
Q Consensus 350 ~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (517)
.... ......||+.|+|||.+.+..++.++|||||||++|+|++|+.||.........................
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 3221 1234568999999999999999999999999999999999999998554443333333222211111110
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 424 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 424 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
. +... .+..+.+++.+||+.||++|||+++|++.|+++.....
T Consensus 241 ~-----~~~~----~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~~~~~ 283 (296)
T 4hgt_A 241 V-----LCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp H-----HTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred h-----hhcc----CCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhC
Confidence 0 0011 12468899999999999999999999999999987654
No 103
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=8.9e-42 Score=332.09 Aligned_cols=263 Identities=23% Similarity=0.310 Sum_probs=208.8
Q ss_pred HHhhhcccCCCCceEEEEEEe-cCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceee-ecCCeeEEEEEec
Q 010131 196 TNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYC-EEEHQRILVYEYM 273 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~-~~~~~~~lv~e~~ 273 (517)
.|.+.+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+.+++.++|++++..+.++ ...+..++||||+
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~ 87 (296)
T 3uzp_A 10 RYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL 87 (296)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred EEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec
Confidence 456678999999999999987 4789999999875432 24688999999999998877777665 5566789999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe---CCCCcEEEccccCccccCCC
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~ 350 (517)
+++|.+++... ...+++..++.++.|++.||+|||+ ++|+||||||+||++ +.++.+||+|||++......
T Consensus 88 -~~~L~~~~~~~--~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (296)
T 3uzp_A 88 -GPSLEDLFNFC--SRKFSLKTVLLLADQMISRIEYIHS---KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccc
Confidence 99999999742 4579999999999999999999999 999999999999999 48899999999999876543
Q ss_pred Ccc------cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 351 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 351 ~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+..........
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~- 240 (296)
T 3uzp_A 162 RTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE- 240 (296)
T ss_dssp TTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH-
T ss_pred ccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH-
Confidence 321 1234568999999999999999999999999999999999999998544433333333222211111110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
.+... .+..+.+++.+||+.||++|||+++|++.|+++.....
T Consensus 241 ----~~~~~----~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~~~~ 283 (296)
T 3uzp_A 241 ----VLCKG----YPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG 283 (296)
T ss_dssp ----HHTTT----SCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred ----HHHhh----CCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHHHhcC
Confidence 00111 12468899999999999999999999999999887654
No 104
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=9.4e-43 Score=342.53 Aligned_cols=262 Identities=21% Similarity=0.312 Sum_probs=190.4
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
.|++.+.||+|+||.||+|... +|+.||+|++..... ...+.+.+|++++++++||||+++++++.+++..++||||+
T Consensus 6 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 85 (317)
T 2pmi_A 6 QFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM 85 (317)
T ss_dssp -------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECC
T ss_pred ceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEec
Confidence 4667889999999999999876 689999999875432 23467889999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccC---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 274 HNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 274 ~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
+ |+|.+++.... ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 86 ~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 161 (317)
T 2pmi_A 86 D-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIP 161 (317)
T ss_dssp C-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCSSCEETTSC
T ss_pred C-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCChHHeEEcCCCCEEECcCccceecCCC
Confidence 7 69999886432 23468999999999999999999999 99999999999999999999999999999876533
Q ss_pred CcccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCC--cc-c--
Q 010131 351 LTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD--VI-S-- 424 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~-~-- 424 (517)
... .....||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+ ....+........ .. .
T Consensus 162 ~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~ 237 (317)
T 2pmi_A 162 VNT-FSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE---QLKLIFDIMGTPNESLWPSVT 237 (317)
T ss_dssp CCC-CCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCCTTTCGGGG
T ss_pred ccc-CCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCCChhHhhhhh
Confidence 221 233458999999999876 468999999999999999999999997443211 1111111111100 00 0
Q ss_pred ---ccCccccC------------CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 425 ---IVDPVLIG------------NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 425 ---~~d~~l~~------------~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
...+.+.. .........+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 238 KLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 00000000 000012346889999999999999999999876
No 105
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=7.1e-43 Score=344.67 Aligned_cols=256 Identities=24% Similarity=0.412 Sum_probs=202.1
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcE----EEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKE----VAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
.|++.+.||+|+||+||+|.+. +++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. ++..++|
T Consensus 14 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v 92 (325)
T 3kex_A 14 ELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLV 92 (325)
T ss_dssp TEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEE
T ss_pred HceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEE
Confidence 4566789999999999999875 3443 8888875432 233356788999999999999999999986 4568999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 93 ~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQH--RGALGPQLLLNWGVQIAKGMYYLEE---HGMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EECCTTCBSHHHHHSS--GGGSCTTHHHHHHHHHHHHHHHHHH---TTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEeCCCCCHHHHHHHc--cccCCHHHHHHHHHHHHHHHHHHHh---CCCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 9999999999999742 3578999999999999999999999 9999999999999999999999999999987654
Q ss_pred CCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccC
Q 010131 350 DLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 427 (517)
Q Consensus 350 ~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 427 (517)
.... ......++..|+|||.+.+..++.++|||||||++|+|+| |+.||....... . ...+..+.......
T Consensus 168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~---~----~~~~~~~~~~~~~~ 240 (325)
T 3kex_A 168 DDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAE---V----PDLLEKGERLAQPQ 240 (325)
T ss_dssp CTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTH---H----HHHHHTTCBCCCCT
T ss_pred ccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHH---H----HHHHHcCCCCCCCC
Confidence 3322 2234457889999999998899999999999999999999 999997443221 1 12222222111110
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 428 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 428 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
.....+.+++.+||+.||++|||++|+++.|+.+...
T Consensus 241 ---------~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 241 ---------ICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp ---------TBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred ---------cCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0112467899999999999999999999999988754
No 106
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=4.1e-43 Score=358.15 Aligned_cols=253 Identities=24% Similarity=0.311 Sum_probs=202.4
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|++.++||+|+||+||+|+++ +++.||+|++.+... .....+.+|..++..++||||++++++|.+.+..++|||
T Consensus 75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~E 154 (437)
T 4aw2_A 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMD 154 (437)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEe
Confidence 3456789999999999999987 478999999864211 122348899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 155 y~~gg~L~~~l~~~--~~~l~e~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~ 229 (437)
T 4aw2_A 155 YYVGGDLLTLLSKF--EDRLPEEMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 229 (437)
T ss_dssp CCTTCBHHHHHHTT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred cCCCCcHHHHHHHc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC
Confidence 99999999999742 4679999999999999999999999 999999999999999999999999999998766554
Q ss_pred cccccccccCCCCcCCCccC-----CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 352 THISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
........||+.|+|||++. ...++.++|||||||++|||++|+.||...+.. +.....+.......
T Consensus 230 ~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~------~~~~~i~~~~~~~~-- 301 (437)
T 4aw2_A 230 TVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV------ETYGKIMNHKERFQ-- 301 (437)
T ss_dssp CEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHCC--
T ss_pred CcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh------HHHHhhhhcccccc--
Confidence 44445567999999999986 567899999999999999999999999743321 11111111100000
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCC--CCCHHHHHH
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVL 465 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~--RPs~~evl~ 465 (517)
-|..... ....+.+++.+||+.+|++ ||+++|+++
T Consensus 302 ~p~~~~~----~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 302 FPTQVTD----VSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CCSSCCC----SCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCccccc----CCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 0111011 1235789999999988888 999999976
No 107
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3e-43 Score=356.46 Aligned_cols=251 Identities=23% Similarity=0.326 Sum_probs=201.4
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||+||+|+.. +++.||+|++.+.. ....+.+.+|+.+++.++||||++++++|.+.+..++|||
T Consensus 70 ~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E 149 (410)
T 3v8s_A 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVME 149 (410)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEe
Confidence 3556789999999999999887 58899999986421 1123457899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++.. ..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++......
T Consensus 150 ~~~gg~L~~~l~~----~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~ 222 (410)
T 3v8s_A 150 YMPGGDLVNLMSN----YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222 (410)
T ss_dssp CCTTEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCCcHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC
Confidence 9999999999973 358999999999999999999999 999999999999999999999999999998776544
Q ss_pred cccccccccCCCCcCCCccCCCC----CCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccC
Q 010131 352 THISSVARGTVGYLDPEYYGNQQ----LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 427 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 427 (517)
........||+.|+|||++.+.. ++.++|||||||++|||++|+.||...+.. ................+
T Consensus 223 ~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~------~~~~~i~~~~~~~~~p~ 296 (410)
T 3v8s_A 223 MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV------GTYSKIMNHKNSLTFPD 296 (410)
T ss_dssp EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHHCCCCT
T ss_pred cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh------hHHHHHHhccccccCCC
Confidence 33344567999999999987654 789999999999999999999999743321 11122211100000000
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCC--CCCHHHHHHH
Q 010131 428 PVLIGNVKIESIWRIAEVAIQCVEQRGFS--RPKMQEIVLA 466 (517)
Q Consensus 428 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~--RPs~~evl~~ 466 (517)
. . .....+.+++.+||+.+|.+ ||+++||++.
T Consensus 297 ~---~----~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 297 D---N----DISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp T---C----CCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred c---c----cccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 0 0 11236789999999999988 9999999864
No 108
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=337.55 Aligned_cols=250 Identities=22% Similarity=0.283 Sum_probs=198.0
Q ss_pred hhHHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcC-CCCCccccceeeecCC
Q 010131 189 LPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 264 (517)
Q Consensus 189 ~~~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 264 (517)
..++....|++.++||+|+||+||+|.+. +|+.||||++..... .....+..|+..+.++ +||||++++++|.+.+
T Consensus 51 ~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~ 130 (311)
T 3p1a_A 51 PESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG 130 (311)
T ss_dssp SSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT
T ss_pred ccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC
Confidence 34666778888999999999999999887 799999999865432 2334556666666655 8999999999999999
Q ss_pred eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCc
Q 010131 265 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 344 (517)
Q Consensus 265 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 344 (517)
..++||||+ +++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 131 ~~~lv~e~~-~~~L~~~~~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kl~DFG~a 204 (311)
T 3p1a_A 131 ILYLQTELC-GPSLQQHCEAW--GASLPEAQVWGYLRDTLLALAHLHS---QGLVHLDVKPANIFLGPRGRCKLGDFGLL 204 (311)
T ss_dssp EEEEEEECC-CCBHHHHHHHH--CSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECGGGCEEECCCTTC
T ss_pred EEEEEEecc-CCCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEccceee
Confidence 999999999 77999888753 4569999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 345 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 345 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
........ .....||+.|+|||++.+ .++.++|||||||++|||++|..|+..... ...+..+...
T Consensus 205 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~~~~----------~~~~~~~~~~- 270 (311)
T 3p1a_A 205 VELGTAGA--GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHGGEG----------WQQLRQGYLP- 270 (311)
T ss_dssp EECC--------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSSHHH----------HHHHTTTCCC-
T ss_pred eecccCCC--CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCCccH----------HHHHhccCCC-
Confidence 87654322 233458999999999886 789999999999999999999777652110 1112222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+.+.. .....+.+++.+||+.||++|||++|+++
T Consensus 271 ---~~~~~----~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 271 ---PEFTA----GLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp ---HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ---ccccc----CCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 11111 12346889999999999999999999986
No 109
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=9.2e-43 Score=341.71 Aligned_cols=259 Identities=25% Similarity=0.370 Sum_probs=196.6
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---hhHHHHHHHHHHHhcCCCCCccccceeeecCCe----eE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ----RI 267 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~ 267 (517)
.|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|+.++++++||||+++++++..... .+
T Consensus 13 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 92 (311)
T 3ork_A 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPY 92 (311)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccE
Confidence 5667899999999999999874 789999999976432 234578899999999999999999999876543 39
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
+||||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++...
T Consensus 93 lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~ 166 (311)
T 3ork_A 93 IVMEYVDGVTLRDIVHT---EGPMTPKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAI 166 (311)
T ss_dssp EEEECCCEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEETTSCEEECCCSCC---
T ss_pred EEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcCCCCHHHEEEcCCCCEEEeeccCcccc
Confidence 99999999999999974 4579999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcc--cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 348 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 348 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
...... ......||+.|+|||++.+..++.++||||||+++|||+||+.||..... ................
T Consensus 167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~------~~~~~~~~~~~~~~~~ 240 (311)
T 3ork_A 167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSP------VSVAYQHVREDPIPPS 240 (311)
T ss_dssp ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHHCCCCCHH
T ss_pred cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHhcCCCCCcc
Confidence 443221 22334589999999999999999999999999999999999999974322 1222222222211100
Q ss_pred cCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHH-HHHHHhhhhh
Q 010131 426 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEI-VLAIQDSIKI 473 (517)
Q Consensus 426 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ev-l~~L~~~~~~ 473 (517)
.. .......+.+++.+||+.||++||++.++ ...+......
T Consensus 241 ---~~----~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~~ 282 (311)
T 3ork_A 241 ---AR----HEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVHNG 282 (311)
T ss_dssp ---HH----STTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHTT
T ss_pred ---cc----cCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhcC
Confidence 00 00123468899999999999999966554 4556555443
No 110
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=3.4e-42 Score=344.47 Aligned_cols=251 Identities=24% Similarity=0.293 Sum_probs=193.2
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
+|.+.+.||+|+||+||+|+.. +++.||||++..... ..+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 21 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 99 (361)
T 3uc3_A 21 RYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYAS 99 (361)
T ss_dssp TEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCC
Confidence 4667899999999999999887 789999999975432 23668899999999999999999999999999999999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc--EEEccccCccccCCCCc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~a~~~~~~~~ 352 (517)
+|+|.+++.. ...+++..++.++.|++.||+|||+ ++|+||||||+||+++.++. +||+|||+++......
T Consensus 100 ~~~L~~~l~~---~~~~~~~~~~~i~~ql~~~L~~LH~---~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~- 172 (361)
T 3uc3_A 100 GGELYERICN---AGRFSEDEARFFFQQLLSGVSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS- 172 (361)
T ss_dssp SCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC-
Confidence 9999999873 4569999999999999999999999 99999999999999987765 9999999987543221
Q ss_pred ccccccccCCCCcCCCccCCCCCCcc-ceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 353 HISSVARGTVGYLDPEYYGNQQLTEK-SDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~~~~-~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
......||+.|+|||++.+..++.+ +|||||||++|+|++|+.||...... .............. .. ..+
T Consensus 173 -~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~--~~~~~~~~~~~~~~-~~-~~~---- 243 (361)
T 3uc3_A 173 -QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEP--RDYRKTIQRILSVK-YS-IPD---- 243 (361)
T ss_dssp ---------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----C--CCHHHHHHHHHTTC-CC-CCT----
T ss_pred -CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccH--HHHHHHHHHHhcCC-CC-CCC----
Confidence 1233458999999999988777655 89999999999999999999743322 22222222222211 10 000
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 244 ---~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 244 ---DIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp ---TSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ---cCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 00112367899999999999999999999874
No 111
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.4e-42 Score=341.39 Aligned_cols=261 Identities=23% Similarity=0.319 Sum_probs=204.3
Q ss_pred HHHhhhcccCCCCceEEEEEEe-cCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeee----cCCeeEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKM-KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE----EEHQRILV 269 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~----~~~~~~lv 269 (517)
..|.+.+.||+|+||.||+|.. .+++.||||++........+.+.+|++++++++||||+++++++. .....++|
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 4567789999999999999987 478999999987665566778999999999999999999999986 34478899
Q ss_pred EEecCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 270 YEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
|||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHA---KGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 99999999999987532 34679999999999999999999999 999999999999999999999999999987653
Q ss_pred CCCccc--------ccccccCCCCcCCCccCCCC---CCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 010131 349 EDLTHI--------SSVARGTVGYLDPEYYGNQQ---LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 417 (517)
Q Consensus 349 ~~~~~~--------~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 417 (517)
...... .....||+.|+|||.+.+.. ++.++||||||+++|+|++|+.||...... ....... .
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~----~ 260 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQK-GDSVALA----V 260 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHT-TSCHHHH----H
T ss_pred cccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcc-cchhhHH----h
Confidence 221110 11234689999999987654 688999999999999999999999621111 1111111 1
Q ss_pred hcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 418 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 418 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
... . .. .........+.+++.+||+.||.+|||++|+++.|+.+..
T Consensus 261 ~~~-~-~~-------~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~ 306 (317)
T 2buj_A 261 QNQ-L-SI-------PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306 (317)
T ss_dssp HCC----C-------CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCC
T ss_pred hcc-C-CC-------CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCC
Confidence 110 0 00 0011123468899999999999999999999999997654
No 112
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-42 Score=336.12 Aligned_cols=258 Identities=24% Similarity=0.413 Sum_probs=208.9
Q ss_pred Hhhhc-ccCCCCceEEEEEEec---CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 197 NNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 197 ~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
+.+.+ .||+|+||.||+|.+. ++..||||++..... ...+.+.+|++++++++||||+++++++ ..+..++|||
T Consensus 11 ~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e 89 (287)
T 1u59_A 11 LLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVME 89 (287)
T ss_dssp EEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEE
T ss_pred hhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEE
Confidence 33444 8999999999999864 578899999986533 3567799999999999999999999999 4556899999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++.. ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 90 ~~~~~~L~~~l~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 164 (287)
T 1u59_A 90 MAGGGPLHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD 164 (287)
T ss_dssp CCTTEEHHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCS
T ss_pred eCCCCCHHHHHHh--CCccCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCchheEEEcCCCCEEECcccceeeeccCc
Confidence 9999999999964 34569999999999999999999999 999999999999999999999999999998765433
Q ss_pred ccc--ccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCc
Q 010131 352 THI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 428 (517)
Q Consensus 352 ~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 428 (517)
... .....+|+.|+|||.+.+..++.++||||||+++|||+| |+.||...... .. ...+..+....
T Consensus 165 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~---~~----~~~i~~~~~~~---- 233 (287)
T 1u59_A 165 SYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGP---EV----MAFIEQGKRME---- 233 (287)
T ss_dssp CEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTH---HH----HHHHHTTCCCC----
T ss_pred ceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHH---HH----HHHHhcCCcCC----
Confidence 221 223346789999999988889999999999999999999 99999743321 11 12222222111
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcC
Q 010131 429 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 476 (517)
Q Consensus 429 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 476 (517)
.+...+..+.+++.+||+.||++||++.|+++.|+.+......
T Consensus 234 -----~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~~~ 276 (287)
T 1u59_A 234 -----CPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 276 (287)
T ss_dssp -----CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHHHT
T ss_pred -----CCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcCC
Confidence 1112334788999999999999999999999999999876553
No 113
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-42 Score=337.83 Aligned_cols=259 Identities=27% Similarity=0.399 Sum_probs=205.3
Q ss_pred hhcccCCCCceEEEEEEecC----CcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCee-EEEEEe
Q 010131 199 FCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR-ILVYEY 272 (517)
Q Consensus 199 ~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~-~lv~e~ 272 (517)
..++||+|+||+||+|.+.+ +..||+|++..... ...+.+.+|+.++++++||||+++++++.+.+.. ++||||
T Consensus 25 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 104 (298)
T 3pls_A 25 SDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLLPY 104 (298)
T ss_dssp EEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEECC
T ss_pred cCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEEec
Confidence 45889999999999998642 23799999976443 3457899999999999999999999999776655 999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+.+|+|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||+++.......
T Consensus 105 ~~~~~L~~~~~~--~~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 179 (298)
T 3pls_A 105 MCHGDLLQFIRS--PQRNPTVKDLISFGLQVARGMEYLAE---QKFVHRDLAARNCMLDESFTVKVADFGLARDILDREY 179 (298)
T ss_dssp CTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGG
T ss_pred ccCCCHHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcc
Confidence 999999999975 35678999999999999999999999 9999999999999999999999999999986543221
Q ss_pred ---ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 353 ---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 353 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
.......+++.|+|||.+.+..++.++||||||+++|+|++|..|+..... ...... .+..+....
T Consensus 180 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~--~~~~~~----~~~~~~~~~----- 248 (298)
T 3pls_A 180 YSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID--PFDLTH----FLAQGRRLP----- 248 (298)
T ss_dssp GCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSC--GGGHHH----HHHTTCCCC-----
T ss_pred cccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCC--HHHHHH----HhhcCCCCC-----
Confidence 122334578899999999999999999999999999999996666542221 112222 122221111
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcCC
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKGG 477 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~~ 477 (517)
........+.+++.+||+.||.+|||++|+++.|++++......
T Consensus 249 ----~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~l~~~ 292 (298)
T 3pls_A 249 ----QPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIVSALLGD 292 (298)
T ss_dssp ----CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHCCSC
T ss_pred ----CCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHHhcc
Confidence 01112346889999999999999999999999999998765433
No 114
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=4.3e-43 Score=346.38 Aligned_cols=257 Identities=23% Similarity=0.407 Sum_probs=200.5
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCc----EEEEEEecCC-CchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGK----EVAVKIMADS-CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 268 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 268 (517)
..|++.+.||+|+||.||+|.+. +++ .||+|.+... .....+.+.+|+.++++++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 35667899999999999999875 444 3577777543 3345678999999999999999999999998765 789
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
|+||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 94 v~~~~~~g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~ 168 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREH--KDNIGSQYLLNWCVQIAKGMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG 168 (327)
T ss_dssp EECCCSSCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEETTEEEECCTTC-----
T ss_pred EEEecCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHhh---CCCcCCCCCHHHEEEcCCCCEEEccCcceeEcc
Confidence 99999999999999753 4569999999999999999999999 999999999999999999999999999998764
Q ss_pred CCCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 349 EDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 349 ~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
..... ......+|+.|+|||.+.+..++.++|||||||++|||++ |+.||....... .. ..+..+....
T Consensus 169 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~---~~----~~~~~~~~~~-- 239 (327)
T 3lzb_A 169 AEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASE---IS----SILEKGERLP-- 239 (327)
T ss_dssp -----------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGG---HH----HHHHTTCCCC--
T ss_pred CccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHH---HH----HHHHcCCCCC--
Confidence 43221 1223346778999999999999999999999999999999 999997443322 11 1222221111
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
........+.+++.+||+.||.+|||++|+++.|+++...
T Consensus 240 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~ 279 (327)
T 3lzb_A 240 -------QPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARD 279 (327)
T ss_dssp -------CCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTS
T ss_pred -------CCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhC
Confidence 1111233688999999999999999999999999998754
No 115
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.1e-43 Score=373.16 Aligned_cols=260 Identities=27% Similarity=0.430 Sum_probs=211.8
Q ss_pred HHHHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 192 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 192 l~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
+....+.+.++||+|+||.||+|.+.++..||||+++... ...+.|.+|++++++++||||+++++++.+ +..++|||
T Consensus 264 i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 264 IPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred cchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 3445567789999999999999999988889999997643 345789999999999999999999999876 67899999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......
T Consensus 342 ~~~~gsL~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 342 YMSKGSLLDFLKGE-TGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CCTTEEHHHHHSHH-HHTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred hhcCCcHHHHHhhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 99999999999743 13468999999999999999999999 999999999999999999999999999998765432
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
........++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .+ +...+..+....
T Consensus 418 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~------~~-~~~~i~~~~~~~------ 484 (535)
T 2h8h_A 418 YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN------RE-VLDQVERGYRMP------ 484 (535)
T ss_dssp HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH------HH-HHHHHHTTCCCC------
T ss_pred eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH------HH-HHHHHHcCCCCC------
Confidence 222233346788999999988899999999999999999999 9999974322 11 112222221111
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
........+.+++.+||+.||++|||+++|++.|+++...
T Consensus 485 ---~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 485 ---CPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp ---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred ---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 1112334688999999999999999999999999987654
No 116
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=2.7e-42 Score=333.59 Aligned_cols=255 Identities=24% Similarity=0.374 Sum_probs=207.8
Q ss_pred hHHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeec------
Q 010131 190 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------ 262 (517)
Q Consensus 190 ~~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 262 (517)
+......|.+.+.||+|+||.||+|.+. +++.||+|++.... +.+.+|++++++++||||+++++++..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (284)
T 2a19_B 6 DKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPE 81 (284)
T ss_dssp CHHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC--
T ss_pred cchhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcc
Confidence 3455667788899999999999999986 79999999997543 356789999999999999999998854
Q ss_pred ----------CCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC
Q 010131 263 ----------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 332 (517)
Q Consensus 263 ----------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~ 332 (517)
....++||||+++++|.+++... ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.
T Consensus 82 ~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~ 157 (284)
T 2a19_B 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR-RGEKLDKVLALELFEQITKGVDYIHS---KKLINRDLKPSNIFLVD 157 (284)
T ss_dssp -------CCEEEEEEEEECCCCSCBHHHHHHHG-GGSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEE
T ss_pred cccccccccCcceEEEEEeccCCCCHHHHHhhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHEEEcC
Confidence 44579999999999999999754 24578999999999999999999999 99999999999999999
Q ss_pred CCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHH
Q 010131 333 NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHW 412 (517)
Q Consensus 333 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~ 412 (517)
++.+||+|||++........ .....|++.|+|||.+.+..++.++||||||+++|+|++|..|+... ..
T Consensus 158 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--------~~- 226 (284)
T 2a19_B 158 TKQVKIGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--------SK- 226 (284)
T ss_dssp TTEEEECCCTTCEESSCCSC--CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--------HH-
T ss_pred CCCEEECcchhheecccccc--ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--------HH-
Confidence 99999999999987654322 22345899999999999989999999999999999999999887411 11
Q ss_pred HHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 413 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 413 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
....+..+..... ....+.+++.+||+.||++|||+.|+++.|+.+.+...
T Consensus 227 ~~~~~~~~~~~~~------------~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~~~~~ 277 (284)
T 2a19_B 227 FFTDLRDGIISDI------------FDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWKKSPE 277 (284)
T ss_dssp HHHHHHTTCCCTT------------SCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHTC---
T ss_pred HHHHhhccccccc------------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhhCCC
Confidence 1112222222111 12357899999999999999999999999998765433
No 117
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-42 Score=343.33 Aligned_cols=273 Identities=23% Similarity=0.374 Sum_probs=198.3
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHH--HhcCCCCCccccceeee-----cCCeeEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVAL--LSRIHHRNLVPLIGYCE-----EEHQRIL 268 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~h~niv~~~~~~~-----~~~~~~l 268 (517)
.|.+.+.||+|+||.||+|+.. ++.||||++... ....+..|.++ +..++||||+++++.+. .....++
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 14 NLKLLELIGRGRYGAVYKGSLD-ERPVAVKVFSFA---NRQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp SEEEEEEEEECSSEEEEEEEET-TEEEEEEEEEGG---GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred HhheeeecccCCCeEEEEEEEC-CeEEEEEEeecc---chhhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 4566789999999999999874 899999998643 23444455555 44589999999998543 2335689
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCC---------CcEecCCCCCCeEeCCCCcEEEc
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP---------GIIHRDVKSSNILLDINMRAKVS 339 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~---------~ivH~dlk~~Nill~~~~~~kl~ 339 (517)
||||+++|+|.+++.. ...++..++.++.|++.||+|||+ . +|+||||||+|||++.++.+||+
T Consensus 90 v~e~~~~g~L~~~l~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~ 162 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSL----HTSDWVSSCRLAHSVTRGLAYLHT---ELPRGDHYKPAISHRDLNSRNVLVKNDGTCVIS 162 (336)
T ss_dssp EECCCTTCBHHHHHHH----CCBCHHHHHHHHHHHHHHHHHHHC---CBCCGGGCBCCEECSSCSGGGEEECTTSCEEEC
T ss_pred EEecCCCCcHHHHHhh----cccchhHHHHHHHHHHHHHHHHHh---hhccccccccceeecccccceEEEcCCCcEEEe
Confidence 9999999999999973 345899999999999999999998 7 99999999999999999999999
Q ss_pred cccCccccCCCCc-------ccccccccCCCCcCCCccCC-------CCCCccceehhHHHHHHHHHhCCCCCCCCCcc-
Q 010131 340 DFGLSRQAEEDLT-------HISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFG- 404 (517)
Q Consensus 340 Dfg~a~~~~~~~~-------~~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~- 404 (517)
|||++........ .......||+.|+|||++.+ ..++.++|||||||++|||++|..||......
T Consensus 163 DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~ 242 (336)
T 3g2f_A 163 DFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242 (336)
T ss_dssp CCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCC
T ss_pred eccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchh
Confidence 9999987643221 11223458999999999987 45677999999999999999997776532221
Q ss_pred ccccH----------HHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 405 AELNI----------VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 405 ~~~~~----------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
..... ................+.... .........+.+++.+||+.||++|||++|+++.|++++..-
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~ 320 (336)
T 3g2f_A 243 EYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAW--KENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW 320 (336)
T ss_dssp CCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTC--CCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred HHHHhhhcccCCCchHHHHHhhhcccccCCCCCccc--ccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence 11100 001111111111111111110 112345667999999999999999999999999999999765
Q ss_pred cCCCCCc
Q 010131 475 KGGDQKF 481 (517)
Q Consensus 475 ~~~~~~~ 481 (517)
.....+.
T Consensus 321 ~~~~~~~ 327 (336)
T 3g2f_A 321 ERNKSVS 327 (336)
T ss_dssp CC-----
T ss_pred HhcccCC
Confidence 5444443
No 118
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=7.9e-42 Score=329.29 Aligned_cols=249 Identities=20% Similarity=0.271 Sum_probs=204.3
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
..|.+.+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 88 (277)
T 3f3z_A 9 QYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELC 88 (277)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred hhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEecc
Confidence 45777899999999999999876 57799999998766666788999999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe---CCCCcEEEccccCccccCCC
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~ 350 (517)
++++|.+++.. ...+++..++.++.|++.||+|||+ .+++||||||+||++ +.++.+||+|||++......
T Consensus 89 ~~~~L~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~ 162 (277)
T 3f3z_A 89 TGGELFERVVH---KRVFRESDAARIMKDVLSAVAYCHK---LNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG 162 (277)
T ss_dssp CSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTT
T ss_pred CCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCc
Confidence 99999998874 4568999999999999999999999 999999999999999 78899999999999876543
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
.. .....||+.|+|||.+.+. ++.++||||||+++|+|++|+.||...... +.. ..+..+..... .. .
T Consensus 163 ~~--~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~-~~~~~~~~~~~-~~-~ 230 (277)
T 3f3z_A 163 KM--MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDS------EVM-LKIREGTFTFP-EK-D 230 (277)
T ss_dssp SC--BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHHHHCCCCCC-HH-H
T ss_pred cc--hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCCCCHH------HHH-HHHHhCCCCCC-ch-h
Confidence 32 2334589999999998764 899999999999999999999999743321 111 12222211100 00 0
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.. .....+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~----~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 231 WL----NVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HT----TSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred hh----cCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 12346889999999999999999999986
No 119
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.1e-42 Score=344.98 Aligned_cols=245 Identities=24% Similarity=0.359 Sum_probs=200.7
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~ 270 (517)
.|.+.+.||+|+||.||+|+.+ +|+.||+|+++... ....+.+..|..++..+ +||||+++++++.+.+..++||
T Consensus 18 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~ 97 (345)
T 1xjd_A 18 DFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVM 97 (345)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEE
T ss_pred HeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEE
Confidence 4566789999999999999986 68999999997532 23456788899999887 8999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++|+|.+++.. ...+++..+..++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.....
T Consensus 98 E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 98 EYLNGGDLMYHIQS---CHKFDLSRATFYAAEIILGLQFLHS---KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp ECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred eCCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 99999999999974 3578999999999999999999999 99999999999999999999999999999864332
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+... .+..+.. ..
T Consensus 172 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~-~i~~~~~------~~ 237 (345)
T 1xjd_A 172 DA-KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE------EELFH-SIRMDNP------FY 237 (345)
T ss_dssp TC-CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH-HHHHCCC------CC
T ss_pred CC-cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH------HHHHH-HHHhCCC------CC
Confidence 21 23445689999999999999999999999999999999999999974332 11111 2222211 11
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHH-HHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQ-EIV 464 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~-evl 464 (517)
.. .....+.+++.+||+.||++||++. |++
T Consensus 238 p~----~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 238 PR----WLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CT----TSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred Cc----ccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 11 1223678999999999999999997 664
No 120
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.5e-42 Score=345.47 Aligned_cols=258 Identities=29% Similarity=0.459 Sum_probs=196.7
Q ss_pred HhhhcccCCCCceEEEEEEec--CC--cEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeec-CCeeEEEE
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK--DG--KEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-EHQRILVY 270 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-~~~~~lv~ 270 (517)
+.+.+.||+|+||+||+|.+. ++ ..||||.+.... ....+.+.+|+.++++++||||+++++++.. ++..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 445688999999999999864 22 468999987543 3456789999999999999999999998754 55789999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.....
T Consensus 171 e~~~~g~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 171 PYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp ECCTTCBHHHHHHC--TTCCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred ECCCCCCHHHHHhh--cccCCCHHHHHHHHHHHHHHHHHHHH---CCEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999999974 24568899999999999999999999 99999999999999999999999999999865432
Q ss_pred Ccc---cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 351 LTH---ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 351 ~~~---~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
... ......+++.|+|||.+.+..++.++|||||||++|||+| |.+||...... .... .+..+... .
T Consensus 246 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~---~~~~----~~~~~~~~--~ 316 (373)
T 3c1x_A 246 EFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITV----YLLQGRRL--L 316 (373)
T ss_dssp ------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS---CHHH----HHHTTCCC--C
T ss_pred ccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH---HHHH----HHHcCCCC--C
Confidence 211 1223346788999999998899999999999999999999 67777633322 2222 12222111 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
. +...+..+.+++.+||+.||++|||++|+++.|+.+.....
T Consensus 317 ~-------p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~~~~~ 358 (373)
T 3c1x_A 317 Q-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 358 (373)
T ss_dssp C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTCC
T ss_pred C-------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhcc
Confidence 1 11123468899999999999999999999999999887544
No 121
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=4.2e-42 Score=339.26 Aligned_cols=247 Identities=23% Similarity=0.345 Sum_probs=192.7
Q ss_pred HHHhhhcccCCCCceEEEEEEe----cCCcEEEEEEecCCC----chhHHHHHHHHHHHhcCCCCCccccceeeecCCee
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 266 (517)
..|++.+.||+|+||.||+|+. .+|+.||+|++.... ......+.+|+.++++++||||+++++++.+.+..
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 96 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKL 96 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCE
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEE
Confidence 4567789999999999999987 468999999997642 22345678899999999999999999999999999
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||+++|+|.+++.. ...+++..++.++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 97 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~ 170 (327)
T 3a62_A 97 YLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQ---KGIIYRDLKPENIMLNHQGHVKLTDFGLCKE 170 (327)
T ss_dssp EEEEECCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCTTTEEECTTSCEEECCCSCC--
T ss_pred EEEEeCCCCCcHHHHHHh---CCCCCHHHHHHHHHHHHHHHHHHHh---CCEEcccCCHHHeEECCCCcEEEEeCCcccc
Confidence 999999999999999974 4568999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
...... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||...+. ......... ...
T Consensus 171 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~i~~-~~~---- 238 (327)
T 3a62_A 171 SIHDGT-VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENR------KKTIDKILK-CKL---- 238 (327)
T ss_dssp ---------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHHHHHHH-TCC----
T ss_pred cccCCc-cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCH------HHHHHHHHh-CCC----
Confidence 433222 22344689999999999998999999999999999999999999974332 111222222 111
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 465 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 465 (517)
.+ +......+.+++.+||+.||++|| ++.|+++
T Consensus 239 --~~----p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 239 --NL----PPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp --CC----CTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred --CC----CCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 01 111234678999999999999999 6777765
No 122
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-42 Score=342.44 Aligned_cols=249 Identities=23% Similarity=0.337 Sum_probs=194.8
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCC--CCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHH--RNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h--~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++.+++| |||+++++++.+.+..++|||
T Consensus 10 ~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e 89 (343)
T 3dbq_A 10 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 89 (343)
T ss_dssp EEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEC
T ss_pred EEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEe
Confidence 356678999999999999999889999999987543 2344778999999999976 999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
+.+++|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+|||++ ++.+||+|||+++......
T Consensus 90 -~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~ 161 (343)
T 3dbq_A 90 -CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 161 (343)
T ss_dssp -CCSEEHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC----
T ss_pred -CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEE-CCcEEEeecccccccCccc
Confidence 568899999984 5679999999999999999999999 9999999999999997 6789999999998765433
Q ss_pred cc-cccccccCCCCcCCCccCC-----------CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc
Q 010131 352 TH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 419 (517)
Q Consensus 352 ~~-~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 419 (517)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .........+..
T Consensus 162 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~-----~~~~~~~~~~~~ 236 (343)
T 3dbq_A 162 TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDP 236 (343)
T ss_dssp --------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----SHHHHHHHHHCT
T ss_pred ccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh-----hHHHHHHHHhcC
Confidence 22 2234568999999999854 678899999999999999999999996321 111222222221
Q ss_pred CCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 420 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 420 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
... ...+......+.+++.+||+.||.+|||+.|+++.
T Consensus 237 ~~~---------~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 237 NHE---------IEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp TSC---------CCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred Ccc---------cCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 111 11111112367899999999999999999999864
No 123
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-42 Score=340.54 Aligned_cols=262 Identities=29% Similarity=0.474 Sum_probs=204.5
Q ss_pred HHHHHhhhcccCCCCceEEEEEEecC-----CcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCee
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMKD-----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 266 (517)
....+.+.+.||+|+||.||+|.+.. +..||||++..... .....+.+|+.++++++||||+++++++.+.+..
T Consensus 42 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 121 (333)
T 1mqb_A 42 HPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPM 121 (333)
T ss_dssp CTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSE
T ss_pred ChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCc
Confidence 33455567899999999999998753 24699999976533 3456789999999999999999999999999999
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 122 ~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 196 (333)
T 1mqb_A 122 MIITEYMENGALDKFLRE--KDGEFSVLQLVGMLRGIAAGMKYLAN---MNYVHRDLAARNILVNSNLVCKVSDFGLSRV 196 (333)
T ss_dssp EEEEECCTTEEHHHHHHH--TTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECCCCC---
T ss_pred EEEEeCCCCCcHHHHHHh--CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChheEEECCCCcEEECCCCcchh
Confidence 999999999999999975 24679999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCcc--cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 010131 347 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVI 423 (517)
Q Consensus 347 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (517)
....... ......+++.|+|||.+.+..++.++||||||+++|||++ |+.||..... .+ +...+..+...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~-~~~~~~~~~~~ 269 (333)
T 1mqb_A 197 LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN------HE-VMKAINDGFRL 269 (333)
T ss_dssp --------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HH-HHHHHHTTCCC
T ss_pred hccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH------HH-HHHHHHCCCcC
Confidence 6543221 1122335778999999998899999999999999999999 9999963322 11 11222222111
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 424 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 424 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
. .....+..+.+++.+||+.||++||++.|+++.|+++.....
T Consensus 270 ~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~~ 312 (333)
T 1mqb_A 270 P---------TPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRAPD 312 (333)
T ss_dssp C---------CCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHSGG
T ss_pred C---------CcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhcch
Confidence 1 111223468899999999999999999999999999886533
No 124
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=2.4e-42 Score=336.50 Aligned_cols=258 Identities=29% Similarity=0.458 Sum_probs=202.4
Q ss_pred HhhhcccCCCCceEEEEEEecC----CcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeee-cCCeeEEEE
Q 010131 197 NNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCE-EEHQRILVY 270 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~-~~~~~~lv~ 270 (517)
|++.+.||+|+||+||+|.+.+ ...||+|.+..... ...+.+.+|+.++++++||||+++++++. .++..++||
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 106 (298)
T 3f66_A 27 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 106 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred hhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEE
Confidence 4567899999999999998653 23689999876433 34577999999999999999999999864 556789999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++|+|.+++.. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++......
T Consensus 107 e~~~~~~L~~~l~~--~~~~~~~~~~~~i~~ql~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 107 PYMKHGDLRNFIRN--ETHNPTVKDLIGFGLQVAKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp ECCTTCBHHHHHHC--TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred eCCCCCCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 99999999999974 34568999999999999999999999 99999999999999999999999999999876443
Q ss_pred Cc---ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 351 LT---HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 351 ~~---~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
.. .......+|+.|+|||.+.+..++.++||||||+++|+|++ |.+||...... .... ....+....
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~---~~~~----~~~~~~~~~-- 252 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF---DITV----YLLQGRRLL-- 252 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTT---THHH----HHHTTCCCC--
T ss_pred chhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHH---HHHH----HHhcCCCCC--
Confidence 21 11223446788999999998899999999999999999999 55555432221 1111 111111100
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
. +...+..+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 253 ~-------~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~~~~ 294 (298)
T 3f66_A 253 Q-------PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFI 294 (298)
T ss_dssp C-------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHTSC
T ss_pred C-------CccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 0 11123468899999999999999999999999999887543
No 125
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4.9e-42 Score=341.52 Aligned_cols=256 Identities=25% Similarity=0.295 Sum_probs=199.1
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCC-----CchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS-----CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 267 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 267 (517)
...|++.+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 104 (345)
T 3hko_A 25 QKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYIC 104 (345)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEE
Confidence 456777899999999999999875 6889999998643 2344578999999999999999999999999999999
Q ss_pred EEEEecCCCCHHhHhhccC-------------------------------------CCCccCHHHHHHHHHHHHHHHHHH
Q 010131 268 LVYEYMHNGTLRDRLHGSV-------------------------------------NQKPLDWLTRLQIAHDAAKGLEYL 310 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~-------------------------------------~~~~l~~~~~~~i~~~ia~aL~~L 310 (517)
+||||+++|+|.+++.... ....+++..++.++.|++.||+||
T Consensus 105 lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 184 (345)
T 3hko_A 105 LVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYL 184 (345)
T ss_dssp EEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985211 022346778889999999999999
Q ss_pred hcCCCCCcEecCCCCCCeEeCCCC--cEEEccccCccccCCCCc---ccccccccCCCCcCCCccCC--CCCCccceehh
Q 010131 311 HTGCNPGIIHRDVKSSNILLDINM--RAKVSDFGLSRQAEEDLT---HISSVARGTVGYLDPEYYGN--QQLTEKSDVYS 383 (517)
Q Consensus 311 H~~~~~~ivH~dlk~~Nill~~~~--~~kl~Dfg~a~~~~~~~~---~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s 383 (517)
|+ .+|+||||||+||+++.++ .+||+|||++........ .......||+.|+|||.+.+ ..++.++||||
T Consensus 185 H~---~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diws 261 (345)
T 3hko_A 185 HN---QGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWS 261 (345)
T ss_dssp HH---TTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHHH
T ss_pred HH---CCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHHH
Confidence 99 9999999999999998776 899999999986533211 12234568999999999865 67889999999
Q ss_pred HHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHH
Q 010131 384 FGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEI 463 (517)
Q Consensus 384 lG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ev 463 (517)
|||++|||++|+.||..... .+............. .+. .......+.+++.+||+.||.+|||+.|+
T Consensus 262 lG~il~el~~g~~pf~~~~~------~~~~~~~~~~~~~~~--~~~-----~~~~~~~~~~li~~~l~~~p~~Rps~~~~ 328 (345)
T 3hko_A 262 AGVLLHLLLMGAVPFPGVND------ADTISQVLNKKLCFE--NPN-----YNVLSPLARDLLSNLLNRNVDERFDAMRA 328 (345)
T ss_dssp HHHHHHHHHHSSCSSCCSSH------HHHHHHHHHCCCCTT--SGG-----GGGSCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred HHHHHHHHHHCCCCCCCCCh------HHHHHHHHhcccccC--Ccc-----cccCCHHHHHHHHHHcCCChhHCCCHHHH
Confidence 99999999999999974332 122222222211110 111 01123468899999999999999999999
Q ss_pred HH
Q 010131 464 VL 465 (517)
Q Consensus 464 l~ 465 (517)
++
T Consensus 329 l~ 330 (345)
T 3hko_A 329 LQ 330 (345)
T ss_dssp HH
T ss_pred hc
Confidence 87
No 126
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.4e-42 Score=339.93 Aligned_cols=266 Identities=28% Similarity=0.445 Sum_probs=211.0
Q ss_pred HHHHhhhcccCCCCceEEEEEEe-----cCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCC--ee
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKM-----KDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--QR 266 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~ 266 (517)
...+++.+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 34566789999999999999984 368899999998766666788999999999999999999999986644 68
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||+++++|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 120 ~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~ 194 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKH--KERIDHIKLLQYTSQICKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKV 194 (326)
T ss_dssp EEEECCCTTCBHHHHHHHS--TTSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred EEEEECCCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCCCcceEEEcCCCcEEEecCcchhh
Confidence 9999999999999999753 3569999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCcc--cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCcc---------ccccHHHHHHH
Q 010131 347 AEEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFG---------AELNIVHWARS 415 (517)
Q Consensus 347 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~---------~~~~~~~~~~~ 415 (517)
....... ......++..|+|||.+.+..++.++||||||+++|||+||..||...... ........+..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (326)
T 2w1i_A 195 LPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE 274 (326)
T ss_dssp CCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred ccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHH
Confidence 6544321 122334677899999998888999999999999999999999998632100 00011111122
Q ss_pred HHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 416 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 416 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
.+..+.... .....+..+.+++.+||+.||++|||+.||++.|+++.+.
T Consensus 275 ~~~~~~~~~---------~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~~~ 323 (326)
T 2w1i_A 275 LLKNNGRLP---------RPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRDQ 323 (326)
T ss_dssp HHHTTCCCC---------CCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HhhcCCCCC---------CCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHH
Confidence 222221111 1112334688999999999999999999999999998754
No 127
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=2e-42 Score=344.59 Aligned_cols=248 Identities=24% Similarity=0.341 Sum_probs=187.5
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
.|.+.+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 54 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 131 (349)
T 2w4o_A 54 FFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVT 131 (349)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred cEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCC
Confidence 4666789999999999999987 57899999997543 34678899999999999999999999999999999999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC---CCcEEEccccCccccCCCC
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~a~~~~~~~ 351 (517)
+|+|.+++. ....+++..++.++.|++.||.|||+ .+|+||||||+||+++. ++.+||+|||+++......
T Consensus 132 ~~~L~~~l~---~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~ 205 (349)
T 2w4o_A 132 GGELFDRIV---EKGYYSERDAADAVKQILEAVAYLHE---NGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV 205 (349)
T ss_dssp SCBHHHHHT---TCSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred CCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc
Confidence 999999997 35679999999999999999999999 99999999999999975 8899999999998764432
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
......||+.|+|||++.+..++.++|||||||++|||++|+.||...... +.....+...... ...+
T Consensus 206 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~------~~~~~~i~~~~~~-~~~~--- 273 (349)
T 2w4o_A 206 --LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGD------QFMFRRILNCEYY-FISP--- 273 (349)
T ss_dssp ---------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCH------HHHHHHHHTTCCC-CCTT---
T ss_pred --ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCccc------HHHHHHHHhCCCc-cCCc---
Confidence 123345899999999999999999999999999999999999999633221 1111122222111 1111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
........+.+++.+||+.||++|||+.|+++
T Consensus 274 --~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 274 --WWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp --TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred --hhhhCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11122346889999999999999999999976
No 128
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=4.7e-42 Score=341.55 Aligned_cols=243 Identities=23% Similarity=0.301 Sum_probs=202.4
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 42 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 121 (350)
T 1rdq_E 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVME 121 (350)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred HCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEc
Confidence 4556789999999999999886 68999999986432 2345678899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.....
T Consensus 122 ~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~- 194 (350)
T 1rdq_E 122 YVAGGEMFSHLRR---IGRFSEPHARFYAAQIVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR- 194 (350)
T ss_dssp CCTTCBHHHHHHH---HCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-
T ss_pred CCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCccceEEECCCCCEEEcccccceeccCC-
Confidence 9999999999974 3568999999999999999999999 99999999999999999999999999999876543
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+... .+..+... +
T Consensus 195 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~-~i~~~~~~------~- 257 (350)
T 1rdq_E 195 ---TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP------IQIYE-KIVSGKVR------F- 257 (350)
T ss_dssp ---BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH-HHHHCCCC------C-
T ss_pred ---cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCH------HHHHH-HHHcCCCC------C-
Confidence 2334689999999999999999999999999999999999999974321 12222 22222211 1
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 465 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~evl~ 465 (517)
+......+.+++.+||+.||.+||+ ++||++
T Consensus 258 ---p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 258 ---PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp ---CTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred ---CCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 1112346889999999999999998 888765
No 129
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=2.5e-42 Score=339.19 Aligned_cols=264 Identities=27% Similarity=0.423 Sum_probs=210.9
Q ss_pred HHHHhhhcccCCCCceEEEEEEe------cCCcEEEEEEecCCCc-hhHHHHHHHHHHHhcC-CCCCccccceeeecCC-
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKM------KDGKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH- 264 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~- 264 (517)
...|.+.+.||+|+||.||+|.+ .+++.||||++..... ...+.+.+|+.++.++ +||||+++++++...+
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 105 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 105 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC
Confidence 34567789999999999999975 2468899999976543 3456789999999999 7999999999987654
Q ss_pred eeEEEEEecCCCCHHhHhhccCC-------------CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC
Q 010131 265 QRILVYEYMHNGTLRDRLHGSVN-------------QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD 331 (517)
Q Consensus 265 ~~~lv~e~~~~gsL~~~l~~~~~-------------~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~ 331 (517)
..++||||+++|+|.+++..... ...+++..++.++.|++.||.|||+ .+|+||||||+||+++
T Consensus 106 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~ 182 (316)
T 2xir_A 106 PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLS 182 (316)
T ss_dssp CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEC
T ss_pred ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHh---CCcccccCccceEEEC
Confidence 58999999999999999985432 1238999999999999999999999 9999999999999999
Q ss_pred CCCcEEEccccCccccCCCCc-ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccH
Q 010131 332 INMRAKVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNI 409 (517)
Q Consensus 332 ~~~~~kl~Dfg~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~ 409 (517)
.++.+||+|||++........ .......+|+.|+|||.+.+..++.++||||||+++|+|+| |+.||....... .
T Consensus 183 ~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~--~- 259 (316)
T 2xir_A 183 EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE--E- 259 (316)
T ss_dssp GGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSH--H-
T ss_pred CCCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhH--H-
Confidence 999999999999987644322 22233457889999999988899999999999999999998 999997433221 1
Q ss_pred HHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 410 VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 410 ~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
....+..+..... .......+.+++.+||+.||.+|||+.|+++.|+.+++...
T Consensus 260 ---~~~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 313 (316)
T 2xir_A 260 ---FCRRLKEGTRMRA---------PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313 (316)
T ss_dssp ---HHHHHHHTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC
T ss_pred ---HHHHhccCccCCC---------CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhhc
Confidence 1122222221111 11122368899999999999999999999999999987543
No 130
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=340.67 Aligned_cols=266 Identities=23% Similarity=0.270 Sum_probs=197.8
Q ss_pred hHHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-----chhHHHHHHHHHHHhcC---CCCCccccceee
Q 010131 190 PELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-----SHRTQQFVTEVALLSRI---HHRNLVPLIGYC 260 (517)
Q Consensus 190 ~~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~h~niv~~~~~~ 260 (517)
.++...+|++.+.||+|+||+||+|+.. +++.||||++.... ......+.+|+.+++++ +||||+++++++
T Consensus 4 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~ 83 (308)
T 3g33_A 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVC 83 (308)
T ss_dssp ------CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEE
T ss_pred CcccccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeee
Confidence 3445567788899999999999999874 68999999986322 11234566788877776 499999999999
Q ss_pred ecCC-----eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc
Q 010131 261 EEEH-----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR 335 (517)
Q Consensus 261 ~~~~-----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~ 335 (517)
.... ..++||||+. ++|.+++.... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.
T Consensus 84 ~~~~~~~~~~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~ 158 (308)
T 3g33_A 84 ATSRTDREIKVTLVFEHVD-QDLRTYLDKAP-PPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGT 158 (308)
T ss_dssp EECCSSSEEEEEEEEECCC-CBHHHHHHTCC-TTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCTTTEEECTTSC
T ss_pred eccCCCCceeEEEEehhhh-cCHHHHHhhcc-CCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCC
Confidence 7654 4789999996 69999997542 3449999999999999999999999 99999999999999999999
Q ss_pred EEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 010131 336 AKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 415 (517)
Q Consensus 336 ~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 415 (517)
+||+|||+++....... .....||+.|+|||++.+..++.++|||||||++|+|++|+.||....... ....+..
T Consensus 159 ~kl~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~ 233 (308)
T 3g33_A 159 VKLADFGLARIYSYQMA--LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD---QLGKIFD 233 (308)
T ss_dssp EEECSCSCTTTSTTCCC--SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH---HHHHHHH
T ss_pred EEEeeCccccccCCCcc--cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHH
Confidence 99999999987654322 234568999999999998899999999999999999999999997433211 1111111
Q ss_pred HHhcCCccccc------CccccC--C-----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 416 MIKKGDVISIV------DPVLIG--N-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 416 ~~~~~~~~~~~------d~~l~~--~-----~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.........+. ...... . ...+....+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 234 LIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp HHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 11111000000 000000 0 00122346789999999999999999999976
No 131
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=8.1e-42 Score=330.67 Aligned_cols=251 Identities=24% Similarity=0.362 Sum_probs=197.7
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
..|.+.+.||+|+||.||+|... ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46778899999999999999875 68999999987543 33567899999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe---CCCCcEEEccccCccccC
Q 010131 273 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 273 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~ 348 (517)
+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++....
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~---~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHS---QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 99999999886432 34679999999999999999999999 999999999999999 456889999999998765
Q ss_pred CCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCc
Q 010131 349 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDP 428 (517)
Q Consensus 349 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 428 (517)
.... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||...... +.... ............
T Consensus 179 ~~~~--~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~~~~~~------~~~~~-~~~~~~~~~~~~ 248 (285)
T 3is5_A 179 SDEH--STNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE------EVQQK-ATYKEPNYAVEC 248 (285)
T ss_dssp ----------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHHHH-HHHCCCCCCC--
T ss_pred Cccc--CcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCCCCCHH------HHHhh-hccCCccccccc
Confidence 4322 233458999999999864 6889999999999999999999999743321 11111 111111000000
Q ss_pred cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 429 VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 429 ~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.. ....+.+++.+||+.||++|||+.|+++
T Consensus 249 ---~~----~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 ---RP----LTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp ---CC----CCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred ---Cc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 00 1236789999999999999999999975
No 132
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.2e-42 Score=340.93 Aligned_cols=261 Identities=23% Similarity=0.305 Sum_probs=197.6
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCch--hHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH--RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
.|++.+.||+|+||+||+|... +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (311)
T 4agu_A 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEY 83 (311)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEe
Confidence 3556789999999999999886 5899999998654332 346788999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+++++|.+++. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 84 ~~~~~l~~~~~---~~~~~~~~~~~~i~~~l~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 157 (311)
T 4agu_A 84 CDHTVLHELDR---YQRGVPEHLVKSITWQTLQAVNFCHK---HNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157 (311)
T ss_dssp CSEEHHHHHHH---TSSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECC----
T ss_pred CCCchHHHHHh---hhcCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc
Confidence 99999999887 35679999999999999999999999 9999999999999999999999999999987654322
Q ss_pred ccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHH-----------hcC
Q 010131 353 HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI-----------KKG 420 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~-----------~~~ 420 (517)
. .....||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||......+. ...+.... ...
T Consensus 158 ~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 158 Y-YDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ---LYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp ---------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH---HHHHHHHHCSCCHHHHHHHHTC
T ss_pred c-cCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHHhcccccccccccccc
Confidence 2 233458999999999865 6789999999999999999999999974433211 11111111 000
Q ss_pred Ccc---cccCccccCCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 421 DVI---SIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 421 ~~~---~~~d~~l~~~~---~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
... ...++.-.... .......+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 000 00010000000 01223458899999999999999999999863
No 133
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=7.9e-43 Score=353.58 Aligned_cols=252 Identities=24% Similarity=0.263 Sum_probs=200.0
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|++.+.||+|+||.||+|+.+ +|+.||+|++.+... ...+.+.+|..++..++||||+++++++.+.+..++|||
T Consensus 62 ~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE 141 (412)
T 2vd5_A 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVME 141 (412)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEEC
T ss_pred hEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEc
Confidence 3556789999999999999986 699999999964321 223458899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++... +..+++..+..++.||+.||+|||+ .+|+||||||+|||++.++++||+|||+++......
T Consensus 142 ~~~gg~L~~~l~~~--~~~l~~~~~~~~~~qi~~aL~~LH~---~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~ 216 (412)
T 2vd5_A 142 YYVGGDLLTLLSKF--GERIPAEMARFYLAEIVMAIDSVHR---LGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG 216 (412)
T ss_dssp CCCSCBHHHHHHHH--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS
T ss_pred CCCCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccCHHHeeecCCCCEEEeechhheeccCCC
Confidence 99999999999743 3479999999999999999999999 999999999999999999999999999998776544
Q ss_pred cccccccccCCCCcCCCccC-------CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 352 THISSVARGTVGYLDPEYYG-------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
........||+.|+|||++. +..++.++|||||||++|||++|+.||...+.. +...........
T Consensus 217 ~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~------~~~~~i~~~~~~-- 288 (412)
T 2vd5_A 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA------ETYGKIVHYKEH-- 288 (412)
T ss_dssp CEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHHHHTHHHH--
T ss_pred ccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH------HHHHHHHhcccC--
Confidence 43344567999999999986 467899999999999999999999999743321 111111110000
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCC---CCHHHHHH
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR---PKMQEIVL 465 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~R---Ps~~evl~ 465 (517)
..-|.. .......+.+++.+||+ +|++| |+++|+++
T Consensus 289 ~~~p~~----~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 289 LSLPLV----DEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CCCC--------CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cCCCcc----ccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 000111 11122367899999999 99998 58888865
No 134
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=1.2e-41 Score=335.39 Aligned_cols=251 Identities=24% Similarity=0.330 Sum_probs=205.4
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCch------hHHHHHHHHHHHhcCCCCCccccceeeecCCee
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 266 (517)
...|.+.+.||+|+||.||+|... +|+.||+|++...... ..+.+.+|+.++++++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 456778899999999999999876 6899999998754321 357899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC----cEEEcccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 342 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 342 (517)
++||||+++++|.+++. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++ .+||+|||
T Consensus 91 ~lv~e~~~~~~L~~~l~---~~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg 164 (321)
T 2a2a_A 91 VLILELVSGGELFDFLA---QKESLSEEEATSFIKQILDGVNYLHT---KKIAHFDLKPENIMLLDKNIPIPHIKLIDFG 164 (321)
T ss_dssp EEEECCCCSCBHHHHHH---TCSCEEHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESCTTSSSCCEEECCCT
T ss_pred EEEEEcCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChHHEEEecCCCCcCCEEEccCc
Confidence 99999999999999997 35679999999999999999999999 9999999999999999888 79999999
Q ss_pred CccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 343 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 343 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
++........ .....||+.|+|||.+.+..++.++||||||+++|+|++|+.||..... .+.... +.....
T Consensus 165 ~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~-i~~~~~ 235 (321)
T 2a2a_A 165 LAHEIEDGVE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTK------QETLAN-ITSVSY 235 (321)
T ss_dssp TCEECCTTCC--CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSH------HHHHHH-HHTTCC
T ss_pred cceecCcccc--ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCH------HHHHHH-HHhccc
Confidence 9987654322 2334589999999999999999999999999999999999999974322 111111 111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
..++..... ....+.+++.+||+.||++|||+.|+++
T Consensus 236 --~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 236 --DFDEEFFSH----TSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp --CCCHHHHTT----CCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred --ccChhhhcc----cCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 001111111 1235789999999999999999999986
No 135
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=8.2e-42 Score=364.00 Aligned_cols=253 Identities=25% Similarity=0.418 Sum_probs=203.5
Q ss_pred ccCCCCceEEEEEEec---CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCCCC
Q 010131 202 KIGKGSFGSVYYGKMK---DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGT 277 (517)
Q Consensus 202 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gs 277 (517)
.||+|+||.||+|.+. ++..||||+++... ....+.|.+|++++++++||||++++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 7999999999999875 46679999997643 3456889999999999999999999999976 56899999999999
Q ss_pred HHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCccc--c
Q 010131 278 LRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI--S 355 (517)
Q Consensus 278 L~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~--~ 355 (517)
|.+++.. ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++......... .
T Consensus 422 L~~~l~~--~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~ 496 (613)
T 2ozo_A 422 LHKFLVG--KREEIPVSNVAELLHQVSMGMKYLEE---KNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTAR 496 (613)
T ss_dssp HHHHHTT--CTTTSCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred HHHHHhh--ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeec
Confidence 9999974 24569999999999999999999999 999999999999999999999999999998765432211 1
Q ss_pred cccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCC
Q 010131 356 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNV 434 (517)
Q Consensus 356 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~ 434 (517)
....+++.|+|||++.+..++.++|||||||++|||+| |+.||......+ +...+..+.... .
T Consensus 497 ~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~-------~~~~i~~~~~~~---------~ 560 (613)
T 2ozo_A 497 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE-------VMAFIEQGKRME---------C 560 (613)
T ss_dssp -----CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHH-------HHHHHHTTCCCC---------C
T ss_pred cCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHH-------HHHHHHcCCCCC---------C
Confidence 22335689999999998899999999999999999998 999997433211 122333332211 1
Q ss_pred CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhcC
Q 010131 435 KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEKG 476 (517)
Q Consensus 435 ~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~~ 476 (517)
+...+..+.+++.+||+.||++||++.+|++.|+.+......
T Consensus 561 p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~~~~~ 602 (613)
T 2ozo_A 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLAS 602 (613)
T ss_dssp CTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHHHHHHSC
T ss_pred CCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHhcc
Confidence 122345788999999999999999999999999998765443
No 136
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=6.7e-42 Score=329.46 Aligned_cols=243 Identities=24% Similarity=0.359 Sum_probs=179.0
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 15 y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (275)
T 2eue_A 15 YQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEY 94 (275)
T ss_dssp BCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred eEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehh
Confidence 556789999999999999865 68999999997542 23356789999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+ +++|.+++. ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 95 ~-~~~l~~~~~---~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 167 (275)
T 2eue_A 95 A-GNELFDYIV---QRDKMSEQEARRFFQQIISAVEYCHR---HKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF 167 (275)
T ss_dssp C-CEEHHHHHH---TSSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred c-CCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCCeeccCChHhEEECCCCCEEEeecccceeccCccc
Confidence 9 778888877 34679999999999999999999999 9999999999999999999999999999986654322
Q ss_pred ccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 353 HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.....||+.|+|||.+.+..+ +.++||||||+++|+|++|+.||...... ... ..+..+... +
T Consensus 168 --~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~-~~~~~~~~~------~- 231 (275)
T 2eue_A 168 --LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIP------VLF-KNISNGVYT------L- 231 (275)
T ss_dssp ---------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHHHHTCCC------C-
T ss_pred --ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH------HHH-HHHHhCCCC------C-
Confidence 223458999999999987765 78999999999999999999999743321 111 122222110 0
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+......+.+++.+||+.||.+|||++|+++
T Consensus 232 ---~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 232 ---PKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---CccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 1112235789999999999999999999975
No 137
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=3.7e-44 Score=350.07 Aligned_cols=262 Identities=27% Similarity=0.429 Sum_probs=189.0
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhc--CCCCCccccceeeecCC----eeEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSR--IHHRNLVPLIGYCEEEH----QRILV 269 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~h~niv~~~~~~~~~~----~~~lv 269 (517)
+|.+.+.||+|+||.||+|++. |+.||||++... ....+.+|.+++.. ++||||+++++++.... ..++|
T Consensus 4 ~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 79 (303)
T 3gxj_A 4 TIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLV 79 (303)
T ss_dssp GCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEE
T ss_pred eeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEE
Confidence 4567789999999999999886 899999998643 34567788888887 78999999999998776 78999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHh--------cCCCCCcEecCCCCCCeEeCCCCcEEEccc
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH--------TGCNPGIIHRDVKSSNILLDINMRAKVSDF 341 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH--------~~~~~~ivH~dlk~~Nill~~~~~~kl~Df 341 (517)
|||+++|+|.+++.. ..+++..++.++.|++.||+||| + ++|+||||||+||+++.++.+||+||
T Consensus 80 ~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~---~~ivH~Dlkp~Nil~~~~~~~kl~DF 152 (303)
T 3gxj_A 80 SDYHEHGSLFDYLNR----YTVTVEGMIKLALSTASGLAHLHMEIVGTQGK---PAIAHRDLKSKNILVKKNGTCCIADL 152 (303)
T ss_dssp EECCTTCCHHHHHHH----CCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCB---C-CCCSCCCGGGC-CCTTCCC-BCCC
T ss_pred EeccCCCCHHHHHhc----cCcchHHHHHHHHHHHHHHHHHHHHHhhhccC---CCEeeCcCCHHHeEECCCCCEEEeec
Confidence 999999999999963 46888899999999999999999 7 99999999999999999999999999
Q ss_pred cCccccCCCCccc---ccccccCCCCcCCCccCCC------CCCccceehhHHHHHHHHHhC----------CCCCCCCC
Q 010131 342 GLSRQAEEDLTHI---SSVARGTVGYLDPEYYGNQ------QLTEKSDVYSFGVVLLELISG----------KKPVSVED 402 (517)
Q Consensus 342 g~a~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~slG~~l~elltg----------~~p~~~~~ 402 (517)
|++.......... .....||+.|+|||++.+. .++.++|||||||++|||+|| +.||....
T Consensus 153 g~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~ 232 (303)
T 3gxj_A 153 GLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232 (303)
T ss_dssp CC-CCEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTC
T ss_pred CcceeccCCCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccC
Confidence 9997654433221 2233689999999998776 445789999999999999999 66664321
Q ss_pred ccccccHHHHHHHHHhcCCcccccCccccCC-CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 403 FGAELNIVHWARSMIKKGDVISIVDPVLIGN-VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~-~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.... ...+ .......... .+..... ...+.+..+.+++.+||+.||++|||++||++.|+++.+.+
T Consensus 233 ~~~~-~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~~ 299 (303)
T 3gxj_A 233 PSDP-SVEE-MRKVVCEQKL----RPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQE 299 (303)
T ss_dssp C-CC-CCC--CHHHHTTSCC----CCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC-
T ss_pred CCCc-cHHH-HHHHHHHhhc----CCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhhc
Confidence 1110 0000 0111111111 1111111 12356678999999999999999999999999999887644
No 138
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.9e-42 Score=341.45 Aligned_cols=242 Identities=23% Similarity=0.324 Sum_probs=200.2
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--------hhHHHHHHHHHHHhcCCCCCccccceeeecCC
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH 264 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 264 (517)
...|.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|+.++++++||||+++++++.+.+
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~ 102 (335)
T 3dls_A 23 SQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG 102 (335)
T ss_dssp HHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS
T ss_pred ccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC
Confidence 356777899999999999999865 689999999975421 12345778999999999999999999999999
Q ss_pred eeEEEEEecCCC-CHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccC
Q 010131 265 QRILVYEYMHNG-TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 343 (517)
Q Consensus 265 ~~~lv~e~~~~g-sL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 343 (517)
..++||||+.+| +|.+++. ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~---~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~ 176 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFID---RHPRLDEPLASYIFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGS 176 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHH---TCCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEEEeCCCCccHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEEeccCHHHEEEcCCCcEEEeeccc
Confidence 999999999777 9999997 45679999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 344 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 344 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
+........ .....||+.|+|||++.+..+ +.++|||||||++|+|++|+.||...... ..
T Consensus 177 a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------------~~---- 238 (335)
T 3dls_A 177 AAYLERGKL--FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------------VE---- 238 (335)
T ss_dssp CEECCTTCC--BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------------TT----
T ss_pred ceECCCCCc--eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------------Hh----
Confidence 987654332 223458999999999988776 88999999999999999999999631110 00
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
....+ +......+.+++.+||+.||++|||++|+++.
T Consensus 239 -~~~~~------~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 239 -AAIHP------PYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp -TCCCC------SSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred -hccCC------CcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 00122368899999999999999999999874
No 139
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1.8e-42 Score=341.38 Aligned_cols=262 Identities=24% Similarity=0.411 Sum_probs=211.1
Q ss_pred HHHHHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCe
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ 265 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 265 (517)
....|.+.+.||+|+||.||+|.+. +++.||||++..... .....+.+|+.++++++||||+++++++.+.+.
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~ 102 (322)
T 1p4o_A 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 102 (322)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSS
T ss_pred hhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCc
Confidence 3446677899999999999999765 367899999975433 344678999999999999999999999999999
Q ss_pred eEEEEEecCCCCHHhHhhccC-------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEE
Q 010131 266 RILVYEYMHNGTLRDRLHGSV-------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKV 338 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~-------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl 338 (517)
.++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ ++|+||||||+||+++.++.+||
T Consensus 103 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dikp~NIli~~~~~~kl 179 (322)
T 1p4o_A 103 TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKI 179 (322)
T ss_dssp CEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCSGGGEEECTTCCEEE
T ss_pred cEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCCccCCCccceEEEcCCCeEEE
Confidence 999999999999999987532 12467999999999999999999999 99999999999999999999999
Q ss_pred ccccCccccCCCCc-ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHH
Q 010131 339 SDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSM 416 (517)
Q Consensus 339 ~Dfg~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 416 (517)
+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|+| |+.||..... .+. ...
T Consensus 180 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~------~~~-~~~ 252 (322)
T 1p4o_A 180 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN------EQV-LRF 252 (322)
T ss_dssp CCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH------HHH-HHH
T ss_pred CcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH------HHH-HHH
Confidence 99999986544322 12223346889999999988889999999999999999999 8999874322 111 122
Q ss_pred HhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 417 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 417 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
+..+..... ....+..+.+++.+||+.||++|||+.|+++.|+++...
T Consensus 253 ~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~~ 300 (322)
T 1p4o_A 253 VMEGGLLDK---------PDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEP 300 (322)
T ss_dssp HHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCT
T ss_pred HHcCCcCCC---------CCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhcc
Confidence 222222111 112234688999999999999999999999999987653
No 140
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=9.2e-42 Score=328.50 Aligned_cols=251 Identities=25% Similarity=0.379 Sum_probs=203.1
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
..|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 86 (276)
T 2yex_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (276)
T ss_dssp HHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEe
Confidence 45677899999999999999886 68999999986443 33457889999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+++++|.+++. ....+++..++.++.|++.||+|||+ .+++|+||||+||+++.++.+||+|||.+........
T Consensus 87 ~~~~~L~~~l~---~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 160 (276)
T 2yex_A 87 CSGGELFDRIE---PDIGMPEPDAQRFFHQLMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (276)
T ss_dssp CTTEEGGGGSB---TTTBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred cCCCcHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc
Confidence 99999999987 35679999999999999999999999 9999999999999999999999999999986543221
Q ss_pred -ccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 353 -HISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 353 -~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
.......|++.|+|||.+.+..+ +.++||||||+++|+|++|+.||....... .....+ ....... .+
T Consensus 161 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~----~~~~~~~---~~-- 230 (276)
T 2yex_A 161 ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC-QEYSDW----KEKKTYL---NP-- 230 (276)
T ss_dssp ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTS-HHHHHH----HTTCTTS---TT--
T ss_pred hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHH-HHHHHh----hhccccc---Cc--
Confidence 12234568999999999987665 789999999999999999999997433221 111111 1111100 00
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.......+.+++.+||+.||++|||++|+++
T Consensus 231 ----~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 231 ----WKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp ----GGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----hhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 0112336789999999999999999999875
No 141
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2.4e-42 Score=343.75 Aligned_cols=267 Identities=19% Similarity=0.203 Sum_probs=199.7
Q ss_pred HHHHHhhhcccCCCCceEEEEEEec----CCcEEEEEEecCCCchh-----------HHHHHHHHHHHhcCCCCCccccc
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSCSHR-----------TQQFVTEVALLSRIHHRNLVPLI 257 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~-----------~~~~~~E~~~l~~l~h~niv~~~ 257 (517)
....|.+.+.||+|+||.||+|... ++..||||+........ ...+.+|+..++.++||||++++
T Consensus 35 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~ 114 (345)
T 2v62_A 35 EGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFY 114 (345)
T ss_dssp TSCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEE
T ss_pred cCceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceee
Confidence 3345677899999999999999886 57889999987653221 13466788999999999999999
Q ss_pred eeeec----CCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC
Q 010131 258 GYCEE----EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN 333 (517)
Q Consensus 258 ~~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~ 333 (517)
+++.. ....++||||+ +++|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+||+++.+
T Consensus 115 ~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~ 187 (345)
T 2v62_A 115 GSGLTEFKGRSYRFMVMERL-GIDLQKISGQ---NGTFKKSTVLQLGIRMLDVLEYIHE---NEYVHGDIKAANLLLGYK 187 (345)
T ss_dssp EEEEEESSSCEEEEEEEECE-EEEHHHHCBG---GGBCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEESS
T ss_pred cccccccCCCcEEEEEEecc-CCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCcCHHHEEEccC
Confidence 99887 67889999999 9999999974 3389999999999999999999999 999999999999999888
Q ss_pred C--cEEEccccCccccCCCCcc------cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccc
Q 010131 334 M--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA 405 (517)
Q Consensus 334 ~--~~kl~Dfg~a~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~ 405 (517)
+ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||+||+.||..... .
T Consensus 188 ~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~-~ 266 (345)
T 2v62_A 188 NPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLK-D 266 (345)
T ss_dssp STTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTT-C
T ss_pred CCCcEEEEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCcccccc-c
Confidence 7 9999999999876432211 11344689999999999999999999999999999999999999963221 1
Q ss_pred cccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 406 ELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
.... .......... ....+..... ....+..+.+++.+||+.||++|||+++|++.|+++..
T Consensus 267 ~~~~-~~~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 267 PVAV-QTAKTNLLDE-LPQSVLKWAP---SGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHH-HHHHHHHHHT-TTHHHHHHSC---TTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred cHHH-HHHHHhhccc-ccHHHHhhcc---ccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 1111 1111111111 1111100000 00123368899999999999999999999999987543
No 142
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=9e-42 Score=334.95 Aligned_cols=262 Identities=26% Similarity=0.420 Sum_probs=199.1
Q ss_pred HHHHhhhcccCCCCceEEEEEEec----CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCC---
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK----DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH--- 264 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--- 264 (517)
...|.+.+.||+|+||.||+|.+. .++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 112 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQG 112 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccC
Confidence 345667889999999999999765 24589999987542 234567999999999999999999999997755
Q ss_pred --eeEEEEEecCCCCHHhHhhccC---CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEc
Q 010131 265 --QRILVYEYMHNGTLRDRLHGSV---NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS 339 (517)
Q Consensus 265 --~~~lv~e~~~~gsL~~~l~~~~---~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 339 (517)
..++||||+++|+|.+++.... ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+
T Consensus 113 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dikp~NIli~~~~~~kl~ 189 (313)
T 3brb_A 113 IPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCMLRDDMTVCVA 189 (313)
T ss_dssp --CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCSGGGEEECTTSCEEEC
T ss_pred CcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCcEEEe
Confidence 3499999999999999985322 34679999999999999999999999 999999999999999999999999
Q ss_pred cccCccccCCCCc-ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHH
Q 010131 340 DFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMI 417 (517)
Q Consensus 340 Dfg~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 417 (517)
|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|++ |..||....... ... .+
T Consensus 190 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~---~~~----~~ 262 (313)
T 3brb_A 190 DFGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE---MYD----YL 262 (313)
T ss_dssp SCSCC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGG---HHH----HH
T ss_pred ecCcceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHH---HHH----HH
Confidence 9999987644322 12223446789999999999999999999999999999999 889987433221 111 11
Q ss_pred hcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 418 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 418 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
..+..... ....+..+.+++.+||+.||++|||+.++++.|+++.+..
T Consensus 263 ~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~~~l 310 (313)
T 3brb_A 263 LHGHRLKQ---------PEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLESL 310 (313)
T ss_dssp HTTCCCCC---------BTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred HcCCCCCC---------CccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhc
Confidence 12211111 1122346889999999999999999999999999987643
No 143
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.1e-42 Score=342.00 Aligned_cols=247 Identities=25% Similarity=0.333 Sum_probs=201.4
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 269 (517)
..|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+..|..++..+ +||||+++++++.+.+..++|
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 99 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 99 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEE
Confidence 34667899999999999999987 47899999997532 23456788999999988 899999999999999999999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 100 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 173 (353)
T 2i0e_A 100 MEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 173 (353)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeccCCHHHEEEcCCCcEEEEeCCccccccc
Confidence 999999999999974 3569999999999999999999999 9999999999999999999999999999986432
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+....... +...
T Consensus 174 ~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~-~~~~------ 239 (353)
T 2i0e_A 174 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIME-HNVA------ 239 (353)
T ss_dssp TTC-CBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-CCCC------
T ss_pred CCc-ccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCH------HHHHHHHHh-CCCC------
Confidence 221 23345689999999999999999999999999999999999999974322 122222222 2110
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCC-----HHHHHH
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPK-----MQEIVL 465 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs-----~~evl~ 465 (517)
+ +......+.+++.+||+.||++||+ ++|+++
T Consensus 240 ~----p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 240 Y----PKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp C----CTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred C----CCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 1 1112346789999999999999995 466654
No 144
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=7.5e-43 Score=344.84 Aligned_cols=264 Identities=30% Similarity=0.496 Sum_probs=208.3
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec-CCcE--EEEEEecCCC-chhHHHHHHHHHHHhcC-CCCCccccceeeecCCe
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKE--VAVKIMADSC-SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 265 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~-~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 265 (517)
.+....|.+.+.||+|+||.||+|+.. ++.. ||+|.+.... ....+.+.+|+++++++ +||||+++++++.+.+.
T Consensus 21 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~ 100 (327)
T 1fvr_A 21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGY 100 (327)
T ss_dssp BCCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTE
T ss_pred cccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCc
Confidence 333456777899999999999999875 4654 4999887533 23456789999999999 89999999999999999
Q ss_pred eEEEEEecCCCCHHhHhhccC-------------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC
Q 010131 266 RILVYEYMHNGTLRDRLHGSV-------------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 332 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~-------------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~ 332 (517)
.++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~ 177 (327)
T 1fvr_A 101 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGE 177 (327)
T ss_dssp EEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECG
T ss_pred eEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCccceEEEcC
Confidence 999999999999999997532 23479999999999999999999999 99999999999999999
Q ss_pred CCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHH
Q 010131 333 NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVH 411 (517)
Q Consensus 333 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~ 411 (517)
++.+||+|||+++....... .....+++.|+|||.+.+..++.++||||||+++|||+| |+.||..... .+
T Consensus 178 ~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~------~~ 249 (327)
T 1fvr_A 178 NYVAKIADFGLSRGQEVYVK--KTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC------AE 249 (327)
T ss_dssp GGCEEECCTTCEESSCEECC--C----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HH
T ss_pred CCeEEEcccCcCcccccccc--ccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH------HH
Confidence 99999999999875432211 122346789999999988889999999999999999998 9999974322 11
Q ss_pred HHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 412 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 412 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
. ...+..+... .........+.+++.+||+.||++|||++|+++.|+++.....
T Consensus 250 ~-~~~~~~~~~~---------~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~~ 303 (327)
T 1fvr_A 250 L-YEKLPQGYRL---------EKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 303 (327)
T ss_dssp H-HHHGGGTCCC---------CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSSS
T ss_pred H-HHHhhcCCCC---------CCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhhc
Confidence 1 1222222111 1111223468899999999999999999999999999887644
No 145
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=9.3e-42 Score=344.75 Aligned_cols=249 Identities=23% Similarity=0.343 Sum_probs=195.9
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--chhHHHHHHHHHHHhcCC--CCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|...+++.||||++.... ....+.+.+|+.++++++ ||||+++++++...+..++|||
T Consensus 57 ~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E 136 (390)
T 2zmd_A 57 IYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME 136 (390)
T ss_dssp EEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe
Confidence 366788999999999999998889999999986543 334577999999999996 5999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
+.+++|.+++.. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++ ++.+||+|||+++......
T Consensus 137 -~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~ 208 (390)
T 2zmd_A 137 -CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDT 208 (390)
T ss_dssp -CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHT---TTCCCCCCCGGGEEES-SSCEEECCCSSSCCC----
T ss_pred -cCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEEE-CCeEEEEecCccccccCCC
Confidence 668899999984 4578999999999999999999999 9999999999999996 5899999999998765433
Q ss_pred cc-cccccccCCCCcCCCccCC-----------CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc
Q 010131 352 TH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 419 (517)
Q Consensus 352 ~~-~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 419 (517)
.. ......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.... .........+..
T Consensus 209 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~-----~~~~~~~~~~~~ 283 (390)
T 2zmd_A 209 TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII-----NQISKLHAIIDP 283 (390)
T ss_dssp -----CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHCT
T ss_pred ccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh-----HHHHHHHHHhCc
Confidence 22 2334569999999999864 468899999999999999999999996322 111222222221
Q ss_pred CCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 420 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 420 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
..... .+......+.+++.+||+.||++|||+.|+++.
T Consensus 284 ~~~~~---------~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 284 NHEIE---------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp TSCCC---------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccCC---------CCccchHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 11111 111112367899999999999999999999864
No 146
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=6e-42 Score=332.64 Aligned_cols=257 Identities=26% Similarity=0.425 Sum_probs=205.0
Q ss_pred HHhhhc-ccCCCCceEEEEEEec---CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEE
Q 010131 196 TNNFCK-KIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 196 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
.|.+.+ .||+|+||.||+|.+. +++.||||++..... ...+.+.+|+++++.++||||+++++++ ..+..++|
T Consensus 17 ~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv 95 (291)
T 1xbb_A 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLV 95 (291)
T ss_dssp GEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEE
T ss_pred hhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEE
Confidence 445555 8999999999999653 468899999975432 2357799999999999999999999999 55678999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|||+++++|.+++.. ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.....
T Consensus 96 ~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 169 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 169 (291)
T ss_dssp EECCTTEEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEEETTEEEECCCTTCEECCT
T ss_pred EEeCCCCCHHHHHHh---CcCCCHHHHHHHHHHHHHHHHHHHh---CCeEcCCCCcceEEEeCCCcEEEccCCcceeecc
Confidence 999999999999984 4569999999999999999999999 9999999999999999999999999999987654
Q ss_pred CCccc--ccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 350 DLTHI--SSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 350 ~~~~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
..... .....+++.|+|||.+.+..++.++||||||+++|+|+| |+.||...... + +...+..+....
T Consensus 170 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~------~-~~~~~~~~~~~~-- 240 (291)
T 1xbb_A 170 DENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------E-VTAMLEKGERMG-- 240 (291)
T ss_dssp TCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHTTCCCC--
T ss_pred CCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHH------H-HHHHHHcCCCCC--
Confidence 33221 122345688999999988889999999999999999999 99999743221 1 122222222111
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
.+...+..+.+++.+||+.||++|||+.|+++.|+++.....
T Consensus 241 -------~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 282 (291)
T 1xbb_A 241 -------CPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYYDVV 282 (291)
T ss_dssp -------CCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHHHh
Confidence 111223468899999999999999999999999999886543
No 147
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=4.3e-42 Score=331.29 Aligned_cols=247 Identities=27% Similarity=0.416 Sum_probs=181.3
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (278)
T 3cok_A 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLE 91 (278)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEe
Confidence 3566789999999999999874 78999999986432 1234678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~~--~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 92 MCHNGEMNRYLKNR--VKPFSENEARHFMHQIITGMLYLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp CCTTEEHHHHHHTC--SSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred cCCCCcHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 99999999999742 3678999999999999999999999 999999999999999999999999999998764332
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||......... .. .... +...
T Consensus 167 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~------~~----~~~~---~~~~- 231 (278)
T 3cok_A 167 EK-HYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL------NK----VVLA---DYEM- 231 (278)
T ss_dssp --------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC---------------CCSS---CCCC-
T ss_pred Cc-ceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHH------HH----Hhhc---ccCC-
Confidence 21 22345899999999999989999999999999999999999999744322110 00 0000 0011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+......+.+++.+||+.||++|||++|+++
T Consensus 232 ---~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 232 ---PSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred ---ccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 1112346789999999999999999999875
No 148
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=1e-41 Score=339.14 Aligned_cols=246 Identities=28% Similarity=0.398 Sum_probs=199.4
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 270 (517)
..|...+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 45666789999999999999864 789999999975432 23467899999999999999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+. |+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++......
T Consensus 134 e~~~-g~l~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~ 207 (348)
T 1u5q_A 134 EYCL-GSASDLLEVH--KKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA 207 (348)
T ss_dssp ECCS-EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB
T ss_pred ecCC-CCHHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC
Confidence 9997 6888877542 4679999999999999999999999 99999999999999999999999999999876432
Q ss_pred CcccccccccCCCCcCCCccC---CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccC
Q 010131 351 LTHISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 427 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 427 (517)
....||+.|+|||++. +..++.++|||||||++|||++|+.||..... ........... ......
T Consensus 208 -----~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~------~~~~~~~~~~~-~~~~~~ 275 (348)
T 1u5q_A 208 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA------MSALYHIAQNE-SPALQS 275 (348)
T ss_dssp -----CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHHSC-CCCCCC
T ss_pred -----CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCh------HHHHHHHHhcC-CCCCCC
Confidence 2345899999999873 56789999999999999999999999973321 12222222221 111111
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 428 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 428 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
......+.+++.+||+.||++|||++|+++.
T Consensus 276 --------~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 276 --------GHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp --------TTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred --------CCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1122357899999999999999999999763
No 149
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.4e-41 Score=350.39 Aligned_cols=245 Identities=25% Similarity=0.380 Sum_probs=202.9
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 17 ~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E 96 (476)
T 2y94_A 17 HYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVME 96 (476)
T ss_dssp TEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 4566789999999999999886 79999999996432 1234678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++|+|.+++. ....+++..++.++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 97 ~~~gg~L~~~l~---~~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~ 170 (476)
T 2y94_A 97 YVSGGELFDYIC---KNGRLDEKESRRLFQQILSGVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 170 (476)
T ss_dssp CCSSEEHHHHTT---SSSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC
T ss_pred CCCCCcHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCCCcccccHHHEEEecCCCeEEEeccchhhccccc
Confidence 999999999997 35679999999999999999999999 999999999999999999999999999998765432
Q ss_pred cccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
. .....||+.|+|||++.+..+ +.++||||+||++|+|++|+.||...... ... ..+..+... .+
T Consensus 171 ~--~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~------~~~-~~i~~~~~~---~p-- 236 (476)
T 2y94_A 171 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP------TLF-KKICDGIFY---TP-- 236 (476)
T ss_dssp C--BCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH------HHH-HHHHTTCCC---CC--
T ss_pred c--ccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH------HHH-HHHhcCCcC---CC--
Confidence 2 234568999999999988765 78999999999999999999999743321 111 122222110 01
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
......+.+++.+||+.||++|||++|+++
T Consensus 237 -----~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 237 -----QYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp -----TTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -----ccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 111235789999999999999999999987
No 150
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.9e-42 Score=332.74 Aligned_cols=245 Identities=26% Similarity=0.413 Sum_probs=198.6
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||+||+|... +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 10 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 89 (279)
T 3fdn_A 10 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILE 89 (279)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEe
Confidence 4556789999999999999876 57799999986432 1234678899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.++|+|||++.......
T Consensus 90 ~~~~~~l~~~l~~---~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~ 163 (279)
T 3fdn_A 90 YAPLGTVYRELQK---LSKFDEQRTATYITELANALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR 163 (279)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred cCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHhEEEcCCCCEEEEeccccccCCccc
Confidence 9999999999874 3568999999999999999999999 999999999999999999999999999986554322
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... +... .+..... .
T Consensus 164 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~-~~~~~~~------~-- 225 (279)
T 3fdn_A 164 ---RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ------ETYK-RISRVEF------T-- 225 (279)
T ss_dssp -------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHH-HHHHTCC------C--
T ss_pred ---ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH------HHHH-HHHhCCC------C--
Confidence 23345899999999999999999999999999999999999999743321 1111 1111111 0
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
.+......+.+++.+||+.||++|||++|+++.
T Consensus 226 --~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 226 --FPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp --CCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred --CCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 111122367899999999999999999999874
No 151
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=3.3e-42 Score=341.68 Aligned_cols=251 Identities=23% Similarity=0.308 Sum_probs=200.0
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEEE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e 271 (517)
...|.+.+.||+|+||.||+|..+ +|+.||||++..... ...+|++++.++ +||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E 96 (342)
T 2qr7_A 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTE 96 (342)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEEC
T ss_pred cccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEe
Confidence 346777899999999999999886 688999999976432 235688888888 79999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC----CcEEEccccCcccc
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 347 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~a~~~ 347 (517)
|+++|+|.+++. ....+++..+..++.||+.||+|||+ .+|+||||||+||++..+ +.+||+|||++...
T Consensus 97 ~~~gg~L~~~i~---~~~~~~~~~~~~~~~qi~~al~~lH~---~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~ 170 (342)
T 2qr7_A 97 LMKGGELLDKIL---RQKFFSEREASAVLFTITKTVEYLHA---QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQL 170 (342)
T ss_dssp CCCSCBHHHHHH---TCTTCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEEC
T ss_pred CCCCCcHHHHHH---HcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccC
Confidence 999999999997 35679999999999999999999999 999999999999998543 35999999999876
Q ss_pred CCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccC
Q 010131 348 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 427 (517)
Q Consensus 348 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 427 (517)
..... ......||+.|+|||++.+..++.++|||||||++|||++|+.||....... ..+ +...+..+....
T Consensus 171 ~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~---~~~-~~~~i~~~~~~~--- 242 (342)
T 2qr7_A 171 RAENG-LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDT---PEE-ILARIGSGKFSL--- 242 (342)
T ss_dssp BCTTC-CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSC---HHH-HHHHHHHCCCCC---
T ss_pred cCCCC-ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCC---HHH-HHHHHccCCccc---
Confidence 54322 2234468999999999988888999999999999999999999997432222 112 222233332211
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 428 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 428 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
...........+.+++.+||+.||++|||+.|+++
T Consensus 243 ---~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 243 ---SGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp ---CSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ---CccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 01111122346789999999999999999999986
No 152
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=1.1e-41 Score=332.96 Aligned_cols=250 Identities=26% Similarity=0.396 Sum_probs=202.2
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
...|.+.+.||+|+||.||+|+.. +|+.||+|++........+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 456778899999999999999876 6899999999865544556789999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe---CCCCcEEEccccCccccCC
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~ 349 (517)
+++++|.+++.. ...+++..++.++.|++.||.|||+ .+++||||||+||++ +.++.+||+|||++.....
T Consensus 88 ~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 161 (304)
T 2jam_A 88 VSGGELFDRILE---RGVYTEKDASLVIQQVLSAVKYLHE---NGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN 161 (304)
T ss_dssp CCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC
T ss_pred CCCccHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEecCCCCCCEEEccCCcceecCC
Confidence 999999999874 3568999999999999999999999 999999999999999 7889999999999876543
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... ... ...+..+... . ...
T Consensus 162 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~-~~~i~~~~~~-~-~~~ 229 (304)
T 2jam_A 162 GI---MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETE------SKL-FEKIKEGYYE-F-ESP 229 (304)
T ss_dssp BT---THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCH------HHH-HHHHHHCCCC-C-CTT
T ss_pred Cc---cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH------HHH-HHHHHcCCCC-C-Ccc
Confidence 21 2234589999999999999999999999999999999999999974321 111 1222222211 0 011
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. .......+.+++.+||+.||++|||++|+++
T Consensus 230 ~----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 230 F----WDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp T----TTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred c----cccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 1122346889999999999999999999986
No 153
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.4e-42 Score=342.89 Aligned_cols=264 Identities=16% Similarity=0.198 Sum_probs=206.0
Q ss_pred HHhhhcccCCCCceEEEEEEecC---------CcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccc-----------
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVP----------- 255 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~----------- 255 (517)
.|.+.+.||+|+||.||+|.... ++.||||++... +.+.+|++++++++||||++
T Consensus 43 ~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 117 (352)
T 2jii_A 43 QWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLL 117 (352)
T ss_dssp EEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTC
T ss_pred eEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCcc
Confidence 45678899999999999998763 789999998754 45789999999999999987
Q ss_pred ----cceeeec-CCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe
Q 010131 256 ----LIGYCEE-EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL 330 (517)
Q Consensus 256 ----~~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill 330 (517)
+++++.. ++..++||||+ +++|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||++
T Consensus 118 ~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~-~~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dikp~NIl~ 192 (352)
T 2jii_A 118 AIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVS-PKHVLSERSVLQVACRLLDALEFLHE---NEYVHGNVTAENIFV 192 (352)
T ss_dssp SCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHS-GGGCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCGGGEEE
T ss_pred CccchhhccccCCcEEEEEecCC-CcCHHHHHHhC-CcCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCCHHHEEE
Confidence 5666665 67889999999 99999999853 13679999999999999999999999 999999999999999
Q ss_pred CCCC--cEEEccccCccccCCCCcc------cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCC
Q 010131 331 DINM--RAKVSDFGLSRQAEEDLTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 402 (517)
Q Consensus 331 ~~~~--~~kl~Dfg~a~~~~~~~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~ 402 (517)
+.++ .+||+|||+++........ ......||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 193 ~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~ 272 (352)
T 2jii_A 193 DPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCL 272 (352)
T ss_dssp ETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred cCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence 9998 8999999999876543221 1133468999999999999999999999999999999999999997433
Q ss_pred ccccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 403 FGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 403 ~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
.. ...+......... ....+.+.... .......+.+++.+||+.||++|||+++|++.|+++.+...
T Consensus 273 ~~-~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~~~~ 339 (352)
T 2jii_A 273 PN-TEDIMKQKQKFVD--KPGPFVGPCGH---WIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 339 (352)
T ss_dssp TC-HHHHHHHHHHHHH--SCCCEECTTSC---EECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHTT
T ss_pred cC-HHHHHHHHHhccC--Chhhhhhhccc---cCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHHHhcC
Confidence 11 1122222221111 11111111110 00112468899999999999999999999999999987654
No 154
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=1.2e-42 Score=335.30 Aligned_cols=253 Identities=30% Similarity=0.483 Sum_probs=199.4
Q ss_pred HHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecC-CeeEEEEEec
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-HQRILVYEYM 273 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-~~~~lv~e~~ 273 (517)
..|++.+.||+|+||+||+|... |+.||||++.... ..+.+.+|++++++++||||+++++++.+. +..++||||+
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~ 97 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 97 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCC
T ss_pred hhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecC
Confidence 45667899999999999999886 8999999987542 457789999999999999999999987544 4789999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcc
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 353 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 353 (517)
++++|.+++.... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 98 AKGSLVDYLRSRG-RSVLGGDCLLKFSLDVCEAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp TTEEHHHHHHHHH-HHHCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCHHHHHHhcc-cccCCHHHHHHHHHHHHHHHHHHHh---CCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 9999999997431 2347899999999999999999999 999999999999999999999999999988654322
Q ss_pred cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 354 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
....+++.|+|||.+.+..++.++||||||+++|+|+| |+.||....... .. ..+..+...
T Consensus 172 --~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~---~~----~~~~~~~~~--------- 233 (278)
T 1byg_A 172 --DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD---VV----PRVEKGYKM--------- 233 (278)
T ss_dssp ------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGG---HH----HHHTTTCCC---------
T ss_pred --cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHH---HH----HHHhcCCCC---------
Confidence 22346889999999988899999999999999999998 999997433221 11 122222111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
......+..+.+++.+||+.||++|||+.|+++.|+++...+
T Consensus 234 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~~~~ 275 (278)
T 1byg_A 234 DAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIKTHE 275 (278)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHC
T ss_pred CCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHHhhh
Confidence 111122346889999999999999999999999999987653
No 155
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=5.1e-43 Score=346.93 Aligned_cols=263 Identities=26% Similarity=0.415 Sum_probs=210.5
Q ss_pred HHHHhhhcccCCCCceEEEEEEecC------CcEEEEEEecCCCc-hhHHHHHHHHHHHhcC-CCCCccccceeeecCCe
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMKD------GKEVAVKIMADSCS-HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 265 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 265 (517)
...|.+.+.||+|+||.||+|.... ...||+|++..... ...+.+.+|+.+++++ +||||+++++++.+.+.
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 124 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGP 124 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCc
Confidence 3456678999999999999998752 24799999976543 3456799999999999 89999999999999999
Q ss_pred eEEEEEecCCCCHHhHhhccC-----------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC
Q 010131 266 RILVYEYMHNGTLRDRLHGSV-----------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM 334 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~-----------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~ 334 (517)
.++||||+++|+|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhc---CCcccCCcccceEEECCCC
Confidence 999999999999999987532 13468999999999999999999999 9999999999999999999
Q ss_pred cEEEccccCccccCCCCcc-cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHH
Q 010131 335 RAKVSDFGLSRQAEEDLTH-ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHW 412 (517)
Q Consensus 335 ~~kl~Dfg~a~~~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~ 412 (517)
.+||+|||++......... ......+++.|+|||.+.+..++.++||||||+++|||+| |..||....... ..
T Consensus 202 ~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~--- 276 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNS--KF--- 276 (333)
T ss_dssp EEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSH--HH---
T ss_pred eEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhH--HH---
Confidence 9999999999876443221 2233446789999999988889999999999999999999 999997433221 11
Q ss_pred HHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 413 ARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 413 ~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
......+.... .+...+..+.+++.+||+.||.+|||++||++.|+++....
T Consensus 277 -~~~~~~~~~~~---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~~~~ 328 (333)
T 2i1m_A 277 -YKLVKDGYQMA---------QPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQAQED 328 (333)
T ss_dssp -HHHHHHTCCCC---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred -HHHHhcCCCCC---------CCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHHHHhh
Confidence 12222221100 01112346889999999999999999999999999887653
No 156
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1e-42 Score=348.66 Aligned_cols=201 Identities=26% Similarity=0.326 Sum_probs=175.4
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-----CCCccccceeeecCC
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----HRNLVPLIGYCEEEH 264 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----h~niv~~~~~~~~~~ 264 (517)
++....|.+.++||+|+||+||+|+.. +++.||||++... ....+.+..|+.+++.++ ||||+++++++...+
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~ 109 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD 109 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC
Confidence 344456778899999999999999885 6899999999743 344566788999999986 999999999999999
Q ss_pred eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC------------
Q 010131 265 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI------------ 332 (517)
Q Consensus 265 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~------------ 332 (517)
..++||||+ +++|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 110 ~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~~~~~~~~~ 184 (360)
T 3llt_A 110 HMCLIFEPL-GPSLYEIITRN-NYNGFHIEDIKLYCIEILKALNYLRK---MSLTHTDLKPENILLDDPYFEKSLITVRR 184 (360)
T ss_dssp EEEEEECCC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCTTCCEEEEEEEC
T ss_pred eeEEEEcCC-CCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCcccEEEccccccccccchhc
Confidence 999999999 99999999754 23469999999999999999999999 99999999999999975
Q ss_pred -------------CCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCC
Q 010131 333 -------------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 399 (517)
Q Consensus 333 -------------~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~ 399 (517)
++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|+|+||+.||.
T Consensus 185 ~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~ 260 (360)
T 3llt_A 185 VTDGKKIQIYRTKSTGIKLIDFGCATFKSDYH----GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260 (360)
T ss_dssp TTTCCEEEEEEESCCCEEECCCTTCEETTSCC----CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCC
T ss_pred ccccccccccccCCCCEEEEeccCceecCCCC----cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCC
Confidence 7899999999998654322 33468999999999999999999999999999999999999997
Q ss_pred CC
Q 010131 400 VE 401 (517)
Q Consensus 400 ~~ 401 (517)
..
T Consensus 261 ~~ 262 (360)
T 3llt_A 261 TH 262 (360)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 157
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.1e-41 Score=334.72 Aligned_cols=257 Identities=24% Similarity=0.337 Sum_probs=197.0
Q ss_pred Hhh-hcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEEEec
Q 010131 197 NNF-CKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 197 ~~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
|.+ .+.||+|+||+||+|... +++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+
T Consensus 14 y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 93 (316)
T 2ac3_A 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKM 93 (316)
T ss_dssp CEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcC
Confidence 344 367999999999999865 6899999999876556678899999999985 7999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc---EEEccccCccccCCC
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEED 350 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~a~~~~~~ 350 (517)
++|+|.+++.. ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||++......
T Consensus 94 ~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 94 RGGSILSHIHK---RRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp TTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred CCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHh---CCceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 99999999974 3578999999999999999999999 99999999999999998776 999999998765322
Q ss_pred Cc------ccccccccCCCCcCCCccCC-----CCCCccceehhHHHHHHHHHhCCCCCCCCCccccc--------cHHH
Q 010131 351 LT------HISSVARGTVGYLDPEYYGN-----QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAEL--------NIVH 411 (517)
Q Consensus 351 ~~------~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~--------~~~~ 411 (517)
.. .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||......+.. ....
T Consensus 168 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 247 (316)
T 2ac3_A 168 GDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247 (316)
T ss_dssp --------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHH
T ss_pred CccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHH
Confidence 11 11123458999999999864 56789999999999999999999999754322100 0011
Q ss_pred HHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 412 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 412 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.....+..+... ..++. .. .....+.+++.+||+.||++|||++|+++
T Consensus 248 ~~~~~i~~~~~~-~~~~~-~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 248 MLFESIQEGKYE-FPDKD-WA----HISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHHHHCCCC-CCHHH-HT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHhccCcc-cCchh-cc----cCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 112222222210 00000 00 12346889999999999999999999987
No 158
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=2.8e-42 Score=345.41 Aligned_cols=255 Identities=22% Similarity=0.321 Sum_probs=202.5
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
...|.+.+.||+|+||.||+|.+. +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+++..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 345667889999999999999886 689999999976533 345679999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
|+++++|.+++.. ...+++..+..++.|++.||+|||+ . +|+||||||+||+++.++.+||+|||++......
T Consensus 112 ~~~~~~L~~~l~~---~~~~~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKK---AGRIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 185 (360)
T ss_dssp CCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---HHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH
T ss_pred CCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---hCCEEcCCccHHHEEECCCCCEEEEECCCCcccccc
Confidence 9999999999974 3568999999999999999999998 6 8999999999999999999999999998765332
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccH---------------------
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNI--------------------- 409 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~--------------------- 409 (517)
. .....||+.|+|||++.+..++.++|||||||++|+|++|+.||...+.......
T Consensus 186 ~---~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (360)
T 3eqc_A 186 M---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGR 262 (360)
T ss_dssp C-------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-------------------
T ss_pred c---ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCC
Confidence 1 2234689999999999999999999999999999999999999974332110000
Q ss_pred ---------------HHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 410 ---------------VHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 410 ---------------~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
.+...... .+.... . ........+.+++.+||+.||++|||++|+++.
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-----~---~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 325 (360)
T 3eqc_A 263 PLNKFGMDSRPPMAIFELLDYIV-NEPPPK-----L---PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH 325 (360)
T ss_dssp -----------CCCHHHHHHHHH-HSCCCC-----C---CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred cccccccCCCCcccchhhhhHHh-ccCCCC-----C---CcccccHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 00000000 000000 0 001123468899999999999999999999873
No 159
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=2.8e-41 Score=326.60 Aligned_cols=249 Identities=24% Similarity=0.338 Sum_probs=202.1
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
.|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 86 (284)
T 3kk8_A 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDL 86 (284)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEec
Confidence 4566789999999999999876 58999999986543 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc---EEEccccCccccCC
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGLSRQAEE 349 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~a~~~~~ 349 (517)
+++++|.+.+.. ...+++..+..++.|++.||+|||+ .+++||||||+||+++.++. +||+|||++.....
T Consensus 87 ~~~~~l~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 87 VTGGELFEDIVA---REFYSEADASHCIQQILESIAYCHS---NGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp CCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred CCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999988874 4568999999999999999999999 99999999999999987655 99999999987654
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ... ..+..+... ...+.
T Consensus 161 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~------~~~-~~~~~~~~~-~~~~~ 230 (284)
T 3kk8_A 161 SEA--WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH------RLY-AQIKAGAYD-YPSPE 230 (284)
T ss_dssp SCB--CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHHHHTCCC-CCTTT
T ss_pred Ccc--ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh------HHH-HHHHhcccc-CCchh
Confidence 332 23345899999999999999999999999999999999999999743221 111 122222111 00110
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.......+.+++.+||+.||++|||++|+++
T Consensus 231 -----~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 231 -----WDTVTPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp -----TTTSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred -----hcccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 0112236789999999999999999999987
No 160
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=3.3e-41 Score=327.19 Aligned_cols=245 Identities=29% Similarity=0.430 Sum_probs=196.2
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeec----CCeeEEE
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILV 269 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 269 (517)
+.+.+.||+|+||+||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 345678999999999999875 68899999987542 3345778999999999999999999998865 3568999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCC--cEecCCCCCCeEeC-CCCcEEEccccCccc
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG--IIHRDVKSSNILLD-INMRAKVSDFGLSRQ 346 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~--ivH~dlk~~Nill~-~~~~~kl~Dfg~a~~ 346 (517)
|||+++++|.+++.. ...+++..++.++.|++.||.|||+ .+ ++||||||+||+++ .++.+||+|||++..
T Consensus 108 ~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~ 181 (290)
T 1t4h_A 108 TELMTSGTLKTYLKR---FKVMKIKVLRSWCRQILKGLQFLHT---RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL 181 (290)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGG
T ss_pred EEecCCCCHHHHHHH---ccCCCHHHHHHHHHHHHHHHHHHHc---CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccc
Confidence 999999999999974 3578999999999999999999999 77 99999999999998 789999999999976
Q ss_pred cCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
..... .....|++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... ..... ..+..+......
T Consensus 182 ~~~~~---~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~-----~~~~~-~~~~~~~~~~~~ 251 (290)
T 1t4h_A 182 KRASF---AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSEYPYSECQN-----AAQIY-RRVTSGVKPASF 251 (290)
T ss_dssp CCTTS---BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSSCTTTTCSS-----HHHHH-HHHTTTCCCGGG
T ss_pred ccccc---cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCCCCCCCcCc-----HHHHH-HHHhccCCcccc
Confidence 54432 223458999999998875 589999999999999999999999973322 11111 222222111111
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+.. ....+.+++.+||+.||.+|||++|+++
T Consensus 252 ~~~--------~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 252 DKV--------AIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp GGC--------CCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCC--------CCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 111 1236889999999999999999999986
No 161
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=2.7e-41 Score=326.54 Aligned_cols=259 Identities=24% Similarity=0.298 Sum_probs=205.8
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc------hhHHHHHHHHHHHhcCCCCCccccceeeecCCee
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS------HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 266 (517)
...|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++.+.+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 346778899999999999999887 689999999865422 1367899999999999999999999999999999
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC----cEEEcccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM----RAKVSDFG 342 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~----~~kl~Dfg 342 (517)
++||||+++++|.+++.. ...+++..++.++.|++.||.|||+ .+++||||||+||+++.++ .+||+|||
T Consensus 84 ~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAE---KESLTEDEATQFLKQILDGVHYLHS---KRIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEEECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 999999999999999974 4578999999999999999999999 9999999999999998877 89999999
Q ss_pred CccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 343 LSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 343 ~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
++........ .....+++.|+|||.+.+..++.++||||||+++|+|++|+.||...... +... .+.....
T Consensus 158 ~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~-~~~~~~~ 228 (283)
T 3bhy_A 158 IAHKIEAGNE--FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ------ETLT-NISAVNY 228 (283)
T ss_dssp TCEECC----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHH-HHHTTCC
T ss_pred cceeccCCCc--ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH------HHHH-HhHhccc
Confidence 9987654322 22345899999999999999999999999999999999999999743221 1111 1111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH--HHHhhhhh
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AIQDSIKI 473 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L~~~~~~ 473 (517)
. .++.... .....+.+++.+||+.||++|||+.|+++ .++.+...
T Consensus 229 ~--~~~~~~~----~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~ 275 (283)
T 3bhy_A 229 D--FDEEYFS----NTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIRRR 275 (283)
T ss_dssp C--CCHHHHT----TCCHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHHHC
T ss_pred C--Ccchhcc----cCCHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHHHH
Confidence 0 0000001 12236789999999999999999999997 45655433
No 162
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=9e-42 Score=341.93 Aligned_cols=249 Identities=25% Similarity=0.341 Sum_probs=193.4
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---hhHHHHHHHHHH-HhcCCCCCccccceeeecCCeeEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
..|++.+.||+|+||.||+|+.+ +++.||+|++.+... .....+..|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 35677899999999999999886 588999999975432 233456777776 5678999999999999999999999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....
T Consensus 118 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~ 191 (373)
T 2r5t_A 118 LDYINGGELFYHLQR---ERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 191 (373)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBC
T ss_pred EeCCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEECCCCCEEEeeCcccccccc
Confidence 999999999999974 4578999999999999999999999 9999999999999999999999999999986433
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
.. .......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+....... +...
T Consensus 192 ~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~-~~~~------ 257 (373)
T 2r5t_A 192 HN-STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT------AEMYDNILN-KPLQ------ 257 (373)
T ss_dssp CC-CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBH------HHHHHHHHH-SCCC------
T ss_pred CC-CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH------HHHHHHHHh-cccC------
Confidence 22 123445699999999999999999999999999999999999999974322 122222222 1110
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAI 467 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L 467 (517)
+.. .....+.+++.+||+.||.+||++.+.++.+
T Consensus 258 ~~~----~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i 291 (373)
T 2r5t_A 258 LKP----NITNSARHLLEGLLQKDRTKRLGAKDDFMEI 291 (373)
T ss_dssp CCS----SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHH
T ss_pred CCC----CCCHHHHHHHHHHcccCHHhCCCCCCCHHHH
Confidence 111 1223678999999999999999986544433
No 163
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=7.9e-42 Score=365.04 Aligned_cols=249 Identities=27% Similarity=0.460 Sum_probs=200.6
Q ss_pred cccCCCCceEEEEEEec---CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCC
Q 010131 201 KKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHN 275 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~ 275 (517)
++||+|+||.||+|.+. .++.||||+++.... ...+.+.+|++++++++||||+++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999664 467899999975432 346789999999999999999999999965 458899999999
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc--c
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT--H 353 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~--~ 353 (517)
|+|.+++.. ...+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++....... .
T Consensus 454 g~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~yLH~---~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 527 (635)
T 4fl3_A 454 GPLNKYLQQ---NRHVKDKNIIELVHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK 527 (635)
T ss_dssp EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC------
T ss_pred CCHHHHHhh---CCCCCHHHHHHHHHHHHHHHHHHHH---CCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc
Confidence 999999973 5679999999999999999999999 9999999999999999999999999999987654322 1
Q ss_pred cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 354 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||...... + +...+..+.....
T Consensus 528 ~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~------~-~~~~i~~~~~~~~------- 593 (635)
T 4fl3_A 528 AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS------E-VTAMLEKGERMGC------- 593 (635)
T ss_dssp -------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHH------H-HHHHHHTTCCCCC-------
T ss_pred cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH------H-HHHHHHcCCCCCC-------
Confidence 2223346788999999999899999999999999999998 99999743321 1 2223333322111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhh
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIK 472 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~ 472 (517)
+...+..+.+++.+||+.||++||++++|++.|+++..
T Consensus 594 --p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~~~ 631 (635)
T 4fl3_A 594 --PAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY 631 (635)
T ss_dssp --CTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred --CCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHH
Confidence 11233578899999999999999999999999998764
No 164
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=2.6e-42 Score=341.23 Aligned_cols=259 Identities=19% Similarity=0.254 Sum_probs=190.5
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCch--hHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH--RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
.|.+.+.||+|+||+||+|... +++.||||++...... ..+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 114 (329)
T 3gbz_A 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEY 114 (329)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEec
Confidence 5677899999999999999865 6899999999754322 245678999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe-----CCCCcEEEccccCcccc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL-----DINMRAKVSDFGLSRQA 347 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill-----~~~~~~kl~Dfg~a~~~ 347 (517)
++ |+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|||++...
T Consensus 115 ~~-~~L~~~~~~---~~~~~~~~~~~i~~ql~~~l~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 115 AE-NDLKKYMDK---NPDVSMRVIKSFLYQLINGVNFCHS---RRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp CS-EEHHHHHHH---CTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred CC-CCHHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 97 599999874 4569999999999999999999999 999999999999999 45556999999999876
Q ss_pred CCCCcccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc-
Q 010131 348 EEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI- 425 (517)
Q Consensus 348 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 425 (517)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||......+ .+.. +............
T Consensus 188 ~~~~~~-~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~--~~~~-~~~~~~~~~~~~~~ 263 (329)
T 3gbz_A 188 GIPIRQ-FTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID--QLFK-IFEVLGLPDDTTWP 263 (329)
T ss_dssp C------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-HHHHHCCCCTTTST
T ss_pred CCcccc-cCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH--HHHH-HHHHhCCCchhhhh
Confidence 433222 2334579999999998774 58999999999999999999999997433211 1111 1111110000000
Q ss_pred --------c--CccccCCC-----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 426 --------V--DPVLIGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 426 --------~--d~~l~~~~-----~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. .+...... .......+.+++.+||+.||++|||++|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 264 GVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 0 00000000 0012346789999999999999999999975
No 165
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=5.5e-42 Score=338.65 Aligned_cols=266 Identities=27% Similarity=0.443 Sum_probs=208.0
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec------CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecC
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK------DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE 263 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 263 (517)
++....|.+.+.||+|+||.||+|.+. +++.||||++.... ......+.+|+.++++++||||+++++++.+.
T Consensus 26 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~ 105 (327)
T 2yfx_A 26 EVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS 105 (327)
T ss_dssp BCCGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCC
Confidence 444556778899999999999999842 47789999997543 34456789999999999999999999999999
Q ss_pred CeeEEEEEecCCCCHHhHhhccCC----CCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC---CCcE
Q 010131 264 HQRILVYEYMHNGTLRDRLHGSVN----QKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRA 336 (517)
Q Consensus 264 ~~~~lv~e~~~~gsL~~~l~~~~~----~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~ 336 (517)
+..++||||+++++|.+++..... ...+++..++.++.|++.||.|||+ .+|+||||||+||+++. +..+
T Consensus 106 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~---~~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 106 LPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE---NHFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCE
T ss_pred CCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeecCcCCHhHEEEecCCCcceE
Confidence 999999999999999999986431 2458999999999999999999999 99999999999999984 4569
Q ss_pred EEccccCccccCCCCc-ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHH
Q 010131 337 KVSDFGLSRQAEEDLT-HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWAR 414 (517)
Q Consensus 337 kl~Dfg~a~~~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~ 414 (517)
||+|||++........ .......+++.|+|||.+.+..++.++||||||+++|+|+| |+.||..... .+ ..
T Consensus 183 kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~------~~-~~ 255 (327)
T 2yfx_A 183 KIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSN------QE-VL 255 (327)
T ss_dssp EECCCHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH------HH-HH
T ss_pred EECccccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCH------HH-HH
Confidence 9999999876433221 12233457889999999988889999999999999999998 9999973321 11 11
Q ss_pred HHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 415 SMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 415 ~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
..+..+..... .......+.+++.+||+.||.+|||+.|+++.|+.+.....
T Consensus 256 ~~~~~~~~~~~---------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~~~~~ 307 (327)
T 2yfx_A 256 EFVTSGGRMDP---------PKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCTQDPD 307 (327)
T ss_dssp HHHHTTCCCCC---------CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHCHH
T ss_pred HHHhcCCCCCC---------CCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHhcCHH
Confidence 22222211111 11123468899999999999999999999999998876543
No 166
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=2.2e-41 Score=329.08 Aligned_cols=247 Identities=23% Similarity=0.358 Sum_probs=196.8
Q ss_pred cccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecCCCCHH
Q 010131 201 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMHNGTLR 279 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~ 279 (517)
..||+|+||.||+|... +++.||||.+........+.+.+|+.+++.++||||+++++++.+.+..++||||+++++|.
T Consensus 28 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (295)
T 2clq_A 28 VVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLS 107 (295)
T ss_dssp CEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEHH
T ss_pred EEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCHH
Confidence 47999999999999875 68899999998766666678999999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC-CCcEEEccccCccccCCCCccccccc
Q 010131 280 DRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-NMRAKVSDFGLSRQAEEDLTHISSVA 358 (517)
Q Consensus 280 ~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~-~~~~kl~Dfg~a~~~~~~~~~~~~~~ 358 (517)
+++........+++..+..++.|++.||+|||+ .+++|+||||+||+++. ++.+||+|||++........ .....
T Consensus 108 ~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~-~~~~~ 183 (295)
T 2clq_A 108 ALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHD---NQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP-CTETF 183 (295)
T ss_dssp HHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC------CCC
T ss_pred HHHHhhccCCCccHHHHHHHHHHHHHHHHHHHh---CCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC-ccccc
Confidence 999865445567899999999999999999999 99999999999999987 89999999999987644221 12334
Q ss_pred ccCCCCcCCCccCCCC--CCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCCCH
Q 010131 359 RGTVGYLDPEYYGNQQ--LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKI 436 (517)
Q Consensus 359 ~g~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~ 436 (517)
.|++.|+|||.+.+.. ++.++||||||+++|+|++|+.||....... ......... .. .+.+ +.
T Consensus 184 ~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~----~~~~~~~~~-~~-----~~~~----~~ 249 (295)
T 2clq_A 184 TGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----AAMFKVGMF-KV-----HPEI----PE 249 (295)
T ss_dssp CCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHH----HHHHHHHHH-CC-----CCCC----CT
T ss_pred CCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchh----HHHHhhccc-cc-----cccc----cc
Confidence 5899999999986643 7899999999999999999999996322111 011111111 10 1111 11
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 437 ESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 437 ~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.....+.+++.+||+.||++|||+.|+++
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 22346789999999999999999999975
No 167
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.4e-41 Score=343.88 Aligned_cols=263 Identities=25% Similarity=0.337 Sum_probs=190.0
Q ss_pred HHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCC-CCCccccceeeecCC--ee
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEH--QR 266 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~--~~ 266 (517)
....|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|+.+++++. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 3446777899999999999999875 68999999986532 344567889999999997 999999999997544 68
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||++ ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 87 ~lv~e~~~-~~L~~~~~~----~~~~~~~~~~i~~qi~~~L~~LH~---~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~ 158 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRA----NILEPVHKQYVVYQLIKVIKYLHS---GGLLHRDMKPSNILLNAECHVKVADFGLSRS 158 (388)
T ss_dssp EEEEECCS-EEHHHHHHH----TCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEecccC-cCHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHeEEcCCCCEEecCCccccc
Confidence 99999997 689998873 468999999999999999999999 9999999999999999999999999999986
Q ss_pred cCCCC--------------------cccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccc
Q 010131 347 AEEDL--------------------THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA 405 (517)
Q Consensus 347 ~~~~~--------------------~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~ 405 (517)
..... ........||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+...
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~ 238 (388)
T 3oz6_A 159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN 238 (388)
T ss_dssp SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 53211 111233468999999999876 678999999999999999999999997543221
Q ss_pred cccHHHHHHHHHhcCCcccc---cC-----------------ccccCCC-------------CHHHHHHHHHHHHHhhcc
Q 010131 406 ELNIVHWARSMIKKGDVISI---VD-----------------PVLIGNV-------------KIESIWRIAEVAIQCVEQ 452 (517)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~---~d-----------------~~l~~~~-------------~~~~~~~l~~li~~cl~~ 452 (517)
....+...+.......+ .. +...... .......+.+++.+||+.
T Consensus 239 ---~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~ 315 (388)
T 3oz6_A 239 ---QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQF 315 (388)
T ss_dssp ---HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCS
T ss_pred ---HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhcc
Confidence 11111111110000000 00 0000000 001134678999999999
Q ss_pred CCCCCCCHHHHHHH
Q 010131 453 RGFSRPKMQEIVLA 466 (517)
Q Consensus 453 ~P~~RPs~~evl~~ 466 (517)
||++|||++|+++.
T Consensus 316 dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 316 NPNKRISANDALKH 329 (388)
T ss_dssp SGGGSCCHHHHTTS
T ss_pred CcccCCCHHHHhCC
Confidence 99999999999874
No 168
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=2.5e-41 Score=328.78 Aligned_cols=247 Identities=23% Similarity=0.352 Sum_probs=202.9
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 16 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (294)
T 2rku_A 16 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 95 (294)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred ceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEe
Confidence 3556789999999999999887 57899999986542 2345678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++.. ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 96 ~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 96 LCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp CCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred cCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 9999999998873 4578999999999999999999999 999999999999999999999999999998764332
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... +.... +..+.. .+.
T Consensus 170 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~------~~~~~-~~~~~~------~~~ 235 (294)
T 2rku_A 170 ER-KKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYLR-IKKNEY------SIP 235 (294)
T ss_dssp CC-BCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHH-HHTTCC------CCC
T ss_pred cc-cccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHHHH-HhhccC------CCc
Confidence 21 23345899999999999989999999999999999999999999743321 11111 111111 011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
. .....+.+++.+||+.||++|||++|+++.
T Consensus 236 ~----~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 236 K----HINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp T----TSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred c----ccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 1 122367899999999999999999999873
No 169
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=3.8e-41 Score=341.31 Aligned_cols=245 Identities=22% Similarity=0.319 Sum_probs=188.6
Q ss_pred cccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhc-CCCCCccccceeeec----CCeeEEEEEecC
Q 010131 201 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSR-IHHRNLVPLIGYCEE----EHQRILVYEYMH 274 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~h~niv~~~~~~~~----~~~~~lv~e~~~ 274 (517)
+.||+|+||+||+|... +|+.||||++... ..+.+|+.++.+ .+||||+++++++.. .+..++||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 68999999999999876 6899999998642 456788888754 489999999998865 567899999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC---CCcEEEccccCccccCCCC
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~a~~~~~~~ 351 (517)
+|+|.+++... ....+++..+..++.||+.||.|||+ .+|+||||||+|||++. ++.+||+|||+++......
T Consensus 143 gg~L~~~l~~~-~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~ 218 (400)
T 1nxk_A 143 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218 (400)
T ss_dssp SEEHHHHHHCC----CCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred CCcHHHHHHHh-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence 99999999853 23469999999999999999999999 99999999999999997 7899999999998764332
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCcccc-ccHHHHHHHHHhcCCcccccCccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE-LNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ..... .+..+... ...+.
T Consensus 219 ~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~----~i~~~~~~-~~~~~- 290 (400)
T 1nxk_A 219 S--LTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKT----RIRMGQYE-FPNPE- 290 (400)
T ss_dssp ----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHH----HHHHTCCC-CCTTT-
T ss_pred c--cccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHH----HHHcCccc-CCCcc-
Confidence 2 2345689999999999999999999999999999999999999974432211 11111 12222211 00000
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
.......+.+++.+||+.||++|||+.|+++.
T Consensus 291 ----~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 291 ----WSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp ----TTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred ----cccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 01123468899999999999999999999874
No 170
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=3.1e-42 Score=340.99 Aligned_cols=261 Identities=23% Similarity=0.343 Sum_probs=198.1
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
.|++.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 105 (331)
T 4aaa_A 26 KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEF 105 (331)
T ss_dssp GEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEec
Confidence 4667889999999999999886 589999999865433 2345688999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+++++|.++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++........
T Consensus 106 ~~~~~l~~~~~---~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 179 (331)
T 4aaa_A 106 VDHTILDDLEL---FPNGLDYQVVQKYLFQIINGIGFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 179 (331)
T ss_dssp CSEEHHHHHHH---STTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred CCcchHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHH---CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc
Confidence 99999988876 35679999999999999999999999 9999999999999999999999999999987544322
Q ss_pred ccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHH----------HHHhcCC
Q 010131 353 HISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR----------SMIKKGD 421 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~----------~~~~~~~ 421 (517)
......|++.|+|||.+.+. .++.++|||||||++|+|++|+.||........ ...... .......
T Consensus 180 -~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 256 (331)
T 4aaa_A 180 -VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQ--LYHIMMCLGNLIPRHQELFNKNP 256 (331)
T ss_dssp -----CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH--HHHHHHHHCSCCHHHHHHHHHCG
T ss_pred -ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHH--HHHHHHHhCCCChhhhhHhhhcc
Confidence 12334589999999998775 789999999999999999999999974432211 111100 0001000
Q ss_pred -cccccCccccCCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 422 -VISIVDPVLIGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 422 -~~~~~d~~l~~~~~-----~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
......+.+..... ......+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp GGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred ccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 00111111111111 123456889999999999999999999986
No 171
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.8e-41 Score=349.79 Aligned_cols=257 Identities=21% Similarity=0.268 Sum_probs=192.9
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCC--CchhHHHHHHHHHHHhcCCCCCccccceeeecC------Cee
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQR 266 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 266 (517)
.|++.+.||+|+||+||+|... +++.||||++... .....+.+.+|+.+++.++||||+++++++... ...
T Consensus 63 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 142 (464)
T 3ttj_A 63 RYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDV 142 (464)
T ss_dssp TEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEE
T ss_pred CeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeE
Confidence 4667889999999999999876 6899999999754 233456788999999999999999999998654 356
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||+++ +|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 143 ~lv~E~~~~-~l~~~~~-----~~l~~~~~~~~~~qil~aL~~lH~---~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~ 213 (464)
T 3ttj_A 143 YLVMELMDA-NLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 213 (464)
T ss_dssp EEEEECCSE-EHHHHHT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECCCCCC--
T ss_pred EEEEeCCCC-CHHHHHh-----hcCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChHhEEEeCCCCEEEEEEEeeee
Confidence 999999976 4666664 248999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHH----------
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM---------- 416 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~---------- 416 (517)
..... ......||+.|+|||++.+..++.++||||+||++|||++|+.||.+.+..+. ...+...
T Consensus 214 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~---~~~i~~~lg~p~~~~~~ 288 (464)
T 3ttj_A 214 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQ---WNKVIEQLGTPCPEFMK 288 (464)
T ss_dssp ---CC--CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCSCCHHHHT
T ss_pred cCCCc--ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCCHHHHH
Confidence 65432 22345689999999999999999999999999999999999999975442211 1111111
Q ss_pred ---------HhcCC------cccccCccccCCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 417 ---------IKKGD------VISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 417 ---------~~~~~------~~~~~d~~l~~~~---~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
..... ........+.... .......+.+|+.+||+.||++|||++|+++.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQH 356 (464)
T ss_dssp TSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred HcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 0000000000000 11224578899999999999999999999863
No 172
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=6e-42 Score=352.72 Aligned_cols=248 Identities=23% Similarity=0.336 Sum_probs=193.3
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCC---CchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 270 (517)
..|++.+.||+|+||.||+|... +|+.||||++... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 148 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~ 227 (446)
T 4ejn_A 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVM 227 (446)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEE
T ss_pred HHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEE
Confidence 34667899999999999999876 6899999999753 2233456788999999999999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+ ..+|+||||||+|||++.++.+||+|||+++.....
T Consensus 228 e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 228 EYANGGELFFHLSR---ERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp CCCSSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred eeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999999974 4578999999999999999999995 278999999999999999999999999999864332
Q ss_pred CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 351 LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
.. ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+....... .... +
T Consensus 303 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~------~~~~~~i~~-~~~~------~ 368 (446)
T 4ejn_A 303 GA-TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILM-EEIR------F 368 (446)
T ss_dssp -----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHHH-CCCC------C
T ss_pred Cc-ccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH------HHHHHHHHh-CCCC------C
Confidence 22 22345689999999999999999999999999999999999999974332 111122221 1110 1
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 465 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 465 (517)
+......+.+++.+||+.||.+|| +++|+++
T Consensus 369 ----p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 369 ----PRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred ----CccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 111224678999999999999999 9999986
No 173
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.1e-42 Score=343.24 Aligned_cols=253 Identities=26% Similarity=0.353 Sum_probs=202.6
Q ss_pred HHHhhhcccCCCCceEEEEEEe----cCCcEEEEEEecCCC----chhHHHHHHHHHHHhcC-CCCCccccceeeecCCe
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKM----KDGKEVAVKIMADSC----SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQ 265 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~ 265 (517)
..|.+.+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 3567789999999999999987 368999999986432 12345677899999999 69999999999999999
Q ss_pred eEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcc
Q 010131 266 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 345 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 345 (517)
.++||||+++|+|.+++.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 134 ~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~ 207 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQ---RERFTEHEVQIYVGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSK 207 (355)
T ss_dssp EEEEECCCCSCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEESCSSEEE
T ss_pred EEEEeecCCCCCHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCcEEEeeCCCCe
Confidence 9999999999999999974 3568999999999999999999999 999999999999999999999999999998
Q ss_pred ccCCCCcccccccccCCCCcCCCccCC--CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 010131 346 QAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 423 (517)
Q Consensus 346 ~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (517)
..............||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... .............
T Consensus 208 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~--~~~~~~~~~~~~~--- 282 (355)
T 1vzo_A 208 EFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN--SQAEISRRILKSE--- 282 (355)
T ss_dssp ECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC--CHHHHHHHHHHCC---
T ss_pred ecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc--hHHHHHHHHhccC---
Confidence 765444433444568999999999975 357899999999999999999999997433221 2222222222211
Q ss_pred cccCccccCCCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHHH
Q 010131 424 SIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVLA 466 (517)
Q Consensus 424 ~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~~ 466 (517)
+. .+......+.+++.+||+.||++|| +++|+++.
T Consensus 283 ----~~----~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 283 ----PP----YPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp ----CC----CCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred ----CC----CCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 11 1112234678999999999999999 89998764
No 174
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=3.2e-41 Score=344.07 Aligned_cols=254 Identities=25% Similarity=0.350 Sum_probs=193.1
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--------hhHHHHHHHHHHHhcCCCCCccccceeee
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCE 261 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 261 (517)
......|.+.+.||+|+||+||+|... +++.||||++..... .....+.+|+.++++++||||+++++++.
T Consensus 131 ~~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~ 210 (419)
T 3i6u_A 131 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 210 (419)
T ss_dssp HHHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE
T ss_pred hhhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 444556778899999999999999876 689999999864321 11234889999999999999999999986
Q ss_pred cCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC---CcEEE
Q 010131 262 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKV 338 (517)
Q Consensus 262 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl 338 (517)
. +..++||||+++|+|.+++. ....+++..+..++.|++.||+|||+ .+|+||||||+|||++.+ ..+||
T Consensus 211 ~-~~~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivHrDlkp~NIll~~~~~~~~~kl 283 (419)
T 3i6u_A 211 A-EDYYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 283 (419)
T ss_dssp S-SEEEEEEECCTTCBGGGGTS---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSSSCCEEE
T ss_pred c-CceEEEEEcCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCCCcceEEE
Confidence 4 45799999999999999887 45679999999999999999999999 999999999999999754 45999
Q ss_pred ccccCccccCCCCcccccccccCCCCcCCCccCC---CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 010131 339 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN---QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 415 (517)
Q Consensus 339 ~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 415 (517)
+|||+++...... ......||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...... .....
T Consensus 284 ~DFG~a~~~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~--~~~~~---- 355 (419)
T 3i6u_A 284 TDFGHSKILGETS--LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQ--VSLKD---- 355 (419)
T ss_dssp CCSSTTTSCC-------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSS--CCHHH----
T ss_pred eecccceecCCCc--cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcch--HHHHH----
Confidence 9999998765432 2234568999999999853 67788999999999999999999999743322 12221
Q ss_pred HHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 416 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 416 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.+..+..... +.... .....+.+++.+||+.||++|||++|+++
T Consensus 356 ~i~~~~~~~~--~~~~~----~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 356 QITSGKYNFI--PEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHTTCCCCC--HHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhcCCCCCC--chhhc----ccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 2222221110 00001 12346889999999999999999999986
No 175
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=1.4e-41 Score=355.05 Aligned_cols=250 Identities=25% Similarity=0.316 Sum_probs=203.4
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
+.+.+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 186 f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy 265 (576)
T 2acx_A 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 265 (576)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred eEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEc
Confidence 455688999999999999886 69999999986432 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
++||+|.+++... ....+++..++.++.||+.||+|||+ ++|+||||||+|||++.++.+||+|||+++.......
T Consensus 266 ~~gg~L~~~l~~~-~~~~l~e~~~~~i~~qIl~aL~yLH~---~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~ 341 (576)
T 2acx_A 266 MNGGDLKFHIYHM-GQAGFPEARAVFYAAEICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341 (576)
T ss_dssp CCSCBHHHHHHSS-SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred CCCCcHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeccCCchheEEEeCCCCeEEEecccceecccCcc
Confidence 9999999998753 23459999999999999999999999 9999999999999999999999999999987654322
Q ss_pred ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 353 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||........ ... +...+.....
T Consensus 342 --~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~--~~~-i~~~i~~~~~---------- 406 (576)
T 2acx_A 342 --IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK--REE-VERLVKEVPE---------- 406 (576)
T ss_dssp --EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCC--HHH-HHHHHHHCCC----------
T ss_pred --ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchh--HHH-HHHHhhcccc----------
Confidence 2334699999999999999999999999999999999999999975432211 111 1122221111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCC-----CHHHHHH
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRP-----KMQEIVL 465 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RP-----s~~evl~ 465 (517)
.++......+.+++.+||+.||++|| +++||++
T Consensus 407 ~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 407 EYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 01111223678999999999999999 7788875
No 176
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=4.7e-41 Score=328.23 Aligned_cols=247 Identities=28% Similarity=0.414 Sum_probs=204.0
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
.|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 102 (303)
T 3a7i_A 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYL 102 (303)
T ss_dssp TEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeC
Confidence 3556789999999999999875 68999999997543 345678999999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcc
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 353 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 353 (517)
++++|.+++. ...+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++........
T Consensus 103 ~~~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 174 (303)
T 3a7i_A 103 GGGSALDLLE----PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 174 (303)
T ss_dssp TTEEHHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC-
T ss_pred CCCcHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChheEEECCCCCEEEeecccceecCcccc-
Confidence 9999999986 4579999999999999999999999 9999999999999999999999999999987654322
Q ss_pred cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCC
Q 010131 354 ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGN 433 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 433 (517)
......|++.|+|||.+.+..++.++||||||+++|+|++|+.||..... .... ..+..+... .+...
T Consensus 175 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~-~~~~~~~~~-----~~~~~ 242 (303)
T 3a7i_A 175 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP------MKVL-FLIPKNNPP-----TLEGN 242 (303)
T ss_dssp CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHH-HHHHHSCCC-----CCCSS
T ss_pred ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH------HHHH-HHhhcCCCC-----CCccc
Confidence 12334589999999999999999999999999999999999999973321 1111 112222111 11111
Q ss_pred CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 434 VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 434 ~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
....+.+++.+||+.||++|||+.|+++.
T Consensus 243 ----~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 243 ----YSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ----CCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ----cCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 22358899999999999999999999874
No 177
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=9.3e-41 Score=344.81 Aligned_cols=262 Identities=21% Similarity=0.289 Sum_probs=206.2
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCC-CCccccceeeecCCeeEEEEEec
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH-RNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h-~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
.|.+.++||+|+||.||+|.+. +++.||||++..... ..++..|+++++.++| +++..+..++.+.+..++||||+
T Consensus 8 ~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~ 85 (483)
T 3sv0_A 8 KFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL 85 (483)
T ss_dssp TEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC
T ss_pred cEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC
Confidence 4566789999999999999874 689999998865432 2357889999999977 55555656667788889999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe---CCCCcEEEccccCccccCCC
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a~~~~~~ 350 (517)
+++|.+++... ...+++..++.++.||+.||+|||+ ++|+||||||+|||+ +.++.+||+|||+++.....
T Consensus 86 -g~sL~~ll~~~--~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 86 -GPSLEDLFNFC--SRKLSLKTVLMLADQMINRVEFVHS---KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp -CCBHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred -CCCHHHHHHhh--cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99999999742 4579999999999999999999999 999999999999999 68899999999999876543
Q ss_pred Ccc------cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 351 LTH------ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 351 ~~~------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
... ......||+.|+|||.+.+..++.++|||||||++|||++|+.||..............+...........
T Consensus 160 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~ 239 (483)
T 3sv0_A 160 STHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEA 239 (483)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHH
T ss_pred ccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHH
Confidence 321 12245689999999999999999999999999999999999999985443322222222221111111111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
+. .. .+..+.+++.+||+.+|++||++++|++.|+++....
T Consensus 240 l~-----~~----~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l~~~~ 280 (483)
T 3sv0_A 240 LC-----RG----YPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDLFIRE 280 (483)
T ss_dssp HH-----TT----SCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHHHHT
T ss_pred Hh-----cC----CcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHHc
Confidence 10 11 1346889999999999999999999999999987654
No 178
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=2.6e-41 Score=334.92 Aligned_cols=246 Identities=24% Similarity=0.350 Sum_probs=202.8
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||++... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 42 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 121 (335)
T 2owb_A 42 RYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLE 121 (335)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEe
Confidence 4566789999999999999886 57899999986542 2345678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++.. ...+++.+++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.......
T Consensus 122 ~~~~~~L~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 122 LCRRRSLLELHKR---RKALTEPEARYYLRQIVLGCQYLHR---NRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp CCTTCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred cCCCCCHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 9999999998874 4578999999999999999999999 999999999999999999999999999998764332
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
. ......|++.|+|||++.+..++.++||||||+++|+|++|+.||...... +.... +..+.. .+.
T Consensus 196 ~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~-~~~~~~------~~~ 261 (335)
T 2owb_A 196 E-RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLK------ETYLR-IKKNEY------SIP 261 (335)
T ss_dssp C-CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHH-HHHTCC------CCC
T ss_pred c-cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHH------HHHHH-HhcCCC------CCC
Confidence 2 123345899999999999888999999999999999999999999743221 11111 111111 011
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. .....+.+++.+||+.||++|||++|+++
T Consensus 262 ~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 262 K----HINPVAASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp T----TSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred c----cCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 11235789999999999999999999987
No 179
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.2e-41 Score=336.18 Aligned_cols=260 Identities=22% Similarity=0.262 Sum_probs=203.8
Q ss_pred cChhHHHHHHHhhh-cccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcC-CCCCccccceeee
Q 010131 187 IPLPELEEATNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCE 261 (517)
Q Consensus 187 ~~~~~l~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~ 261 (517)
+...+.....|.+. +.||+|+||.||+|... +++.||+|++.... ......+.+|+.+++++ +||||+++++++.
T Consensus 20 ~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~ 99 (327)
T 3lm5_A 20 FQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYE 99 (327)
T ss_dssp SBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEE
T ss_pred HHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEE
Confidence 33345555666665 88999999999999876 68999999987543 23467899999999999 5799999999999
Q ss_pred cCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC---CCcEEE
Q 010131 262 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKV 338 (517)
Q Consensus 262 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl 338 (517)
+.+..++||||+++|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||
T Consensus 100 ~~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~i~~ql~~~L~~LH~---~givH~Dikp~NIl~~~~~~~~~~kL 175 (327)
T 3lm5_A 100 NTSEIILILEYAAGGEIFSLCLPE-LAEMVSENDVIRLIKQILEGVYYLHQ---NNIVHLDLKPQNILLSSIYPLGDIKI 175 (327)
T ss_dssp CSSEEEEEEECCTTEEGGGGGSSC-C-CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEESCBTTBCCEEE
T ss_pred eCCeEEEEEEecCCCcHHHHHHHh-cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCcCChHHEEEecCCCCCcEEE
Confidence 999999999999999999998643 34679999999999999999999999 99999999999999998 789999
Q ss_pred ccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHh
Q 010131 339 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 418 (517)
Q Consensus 339 ~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 418 (517)
+|||++........ .....||+.|+|||++.+..++.++||||||+++|+|++|+.||...+... .... +.
T Consensus 176 ~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~------~~~~-i~ 246 (327)
T 3lm5_A 176 VDFGMSRKIGHACE--LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE------TYLN-IS 246 (327)
T ss_dssp CCGGGCEEC-----------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHH-HH
T ss_pred eeCccccccCCccc--cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH------HHHH-HH
Confidence 99999987654322 233458999999999999999999999999999999999999997433211 1111 11
Q ss_pred cCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 419 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 419 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
..... . ...........+.+++.+||+.||++|||++|+++
T Consensus 247 ~~~~~-~-----~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 247 QVNVD-Y-----SEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp HTCCC-C-----CTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccc-c-----CchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 11100 0 00111122346889999999999999999999876
No 180
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=3.5e-42 Score=339.57 Aligned_cols=259 Identities=21% Similarity=0.318 Sum_probs=193.0
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchh-HHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHR-TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
|.+.+.||+|+||+||+|... +++.||||++....... ...+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 4 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 83 (324)
T 3mtl_A 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD 83 (324)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS
T ss_pred eEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc
Confidence 556789999999999999886 78999999986543221 1245679999999999999999999999999999999997
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCccc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 354 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 354 (517)
|+|.+++... ...+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++.........
T Consensus 84 -~~l~~~~~~~--~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~- 156 (324)
T 3mtl_A 84 -KDLKQYLDDC--GNIINMHNVKLFLFQLLRGLAYCHR---QKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT- 156 (324)
T ss_dssp -EEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHH---TTEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred -cCHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc-
Confidence 5898888753 4568999999999999999999999 99999999999999999999999999999865433221
Q ss_pred ccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCC---cccccC---
Q 010131 355 SSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---VISIVD--- 427 (517)
Q Consensus 355 ~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~d--- 427 (517)
.....||+.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+..+ ....+........ ......
T Consensus 157 ~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~~~~~~~ 233 (324)
T 3mtl_A 157 YDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE---QLHFIFRILGTPTEETWPGILSNEE 233 (324)
T ss_dssp ------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCCCTTTSTTGGGCHH
T ss_pred cccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCChHhchhhhcchh
Confidence 223457999999999876 568999999999999999999999997443221 1222222211110 000000
Q ss_pred ------ccccCCC----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 428 ------PVLIGNV----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 428 ------~~l~~~~----~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+...... .......+.+++.+||+.||++|||++|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 234 FKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 0000000 0112346789999999999999999999987
No 181
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.2e-41 Score=328.21 Aligned_cols=253 Identities=26% Similarity=0.376 Sum_probs=201.6
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeee--cCCeeEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRILVY 270 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~ 270 (517)
.|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++. .....++||
T Consensus 7 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 86 (279)
T 2w5a_A 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVM 86 (279)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEE
T ss_pred heeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEE
Confidence 4566789999999999999886 68999999997543 334567999999999999999999999874 466889999
Q ss_pred EecCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCC-----cEecCCCCCCeEeCCCCcEEEccccCc
Q 010131 271 EYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPG-----IIHRDVKSSNILLDINMRAKVSDFGLS 344 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~-----ivH~dlk~~Nill~~~~~~kl~Dfg~a 344 (517)
||+++++|.+++.... ....+++..++.++.|++.||+|||+ .+ ++||||||+||+++.++.+||+|||++
T Consensus 87 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~ 163 (279)
T 2w5a_A 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHR---RSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLA 163 (279)
T ss_dssp ECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HC------CCCCCSGGGEEECSSSCEEECCCCHH
T ss_pred eCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhc---ccCCCCeeEEeccchhhEEEcCCCCEEEecCchh
Confidence 9999999999997543 34559999999999999999999999 77 999999999999999999999999999
Q ss_pred cccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 345 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 345 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
......... .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...+. .+ ....+..+....
T Consensus 164 ~~~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~-~~~~i~~~~~~~ 235 (279)
T 2w5a_A 164 RILNHDTSF-AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ------KE-LAGKIREGKFRR 235 (279)
T ss_dssp HHC---CHH-HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHTCCCC
T ss_pred eeecccccc-ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH------HH-HHHHHhhccccc
Confidence 876543221 2234589999999999988999999999999999999999999974321 11 122233333211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHH
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQ 468 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~ 468 (517)
+ +......+.+++.+||+.||++|||++||++.+.
T Consensus 236 ~---------~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~ 270 (279)
T 2w5a_A 236 I---------PYRYSDELNEIITRMLNLKDYHRPSVEEILENPL 270 (279)
T ss_dssp C---------CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTT
T ss_pred C---------CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChh
Confidence 1 1112346889999999999999999999988543
No 182
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=1.4e-41 Score=331.69 Aligned_cols=250 Identities=20% Similarity=0.360 Sum_probs=197.5
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEecC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYMH 274 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 274 (517)
.|++.+.||+|+||.||+|.+. +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 20 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 99 (302)
T 2j7t_A 20 VWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCP 99 (302)
T ss_dssp TEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCT
T ss_pred ceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCC
Confidence 4567889999999999999987 589999999976666667889999999999999999999999999999999999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCccc
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHI 354 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~ 354 (517)
+++|.+++... ...+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++........ .
T Consensus 100 ~~~l~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 173 (302)
T 2j7t_A 100 GGAVDAIMLEL--DRGLTEPQIQVVCRQMLEALNFLHS---KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ-K 173 (302)
T ss_dssp TEEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-C
T ss_pred CCcHHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-c
Confidence 99999988642 4568999999999999999999999 9999999999999999999999999998764322111 1
Q ss_pred ccccccCCCCcCCCcc-----CCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 355 SSVARGTVGYLDPEYY-----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 355 ~~~~~g~~~y~aPE~~-----~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
.....|++.|+|||.+ .+..++.++||||||+++|+|++|+.||...+. ......... +.......
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~~~~-~~~~~~~~-- 244 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAK-SDPPTLLT-- 244 (302)
T ss_dssp -----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHHHHH-SCCCCCSS--
T ss_pred cccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCH------HHHHHHHhc-cCCcccCC--
Confidence 1234588999999988 467789999999999999999999999974322 111222222 11111111
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.......+.+++.+||+.||++|||+.|+++
T Consensus 245 -----~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 245 -----PSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp -----GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred -----ccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 1112346889999999999999999999875
No 183
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=4.8e-41 Score=337.07 Aligned_cols=253 Identities=16% Similarity=0.164 Sum_probs=204.6
Q ss_pred HHHhhhcccCCCCceEEEEEE------ecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCC---CCCccccceeeecCCe
Q 010131 195 ATNNFCKKIGKGSFGSVYYGK------MKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEHQ 265 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~ 265 (517)
..|.+.+.||+|+||+||+|. ..+++.||||++... ....+..|++++++++ |+||+++++++...+.
T Consensus 65 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~ 141 (365)
T 3e7e_A 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNG 141 (365)
T ss_dssp SEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSC
T ss_pred EEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeeecCCC
Confidence 456667899999999999994 346889999999754 3456778888888886 9999999999999999
Q ss_pred eEEEEEecCCCCHHhHhhccC--CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC-----------
Q 010131 266 RILVYEYMHNGTLRDRLHGSV--NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI----------- 332 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~----------- 332 (517)
.++||||+++|+|.+++.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.
T Consensus 142 ~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~---~~ivHrDiKp~NIll~~~~~~~~~~~~~ 218 (365)
T 3e7e_A 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHD---CEIIHGDIKPDNFILGNGFLEQDDEDDL 218 (365)
T ss_dssp EEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECGGGTCC------
T ss_pred cEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEecccccCccccccc
Confidence 999999999999999997432 35679999999999999999999999 99999999999999998
Q ss_pred CCcEEEccccCccccCCC-CcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHH
Q 010131 333 NMRAKVSDFGLSRQAEED-LTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVH 411 (517)
Q Consensus 333 ~~~~kl~Dfg~a~~~~~~-~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~ 411 (517)
++.+||+|||+++..... .........||+.|+|||++.+..++.++|||||||++|||+||+.||........
T Consensus 219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~----- 293 (365)
T 3e7e_A 219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGEC----- 293 (365)
T ss_dssp CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEE-----
T ss_pred cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCce-----
Confidence 899999999999765321 12233445699999999999999999999999999999999999999963221110
Q ss_pred HHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCC-CCHHHHHHHHHhhhhhh
Q 010131 412 WARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSR-PKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 412 ~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~R-Ps~~evl~~L~~~~~~~ 474 (517)
.++..+.... ....+.+++..|++.+|.+| |+++++.+.|++.....
T Consensus 294 -------------~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~l~~~ 341 (365)
T 3e7e_A 294 -------------KPEGLFRRLP---HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQH 341 (365)
T ss_dssp -------------EECSCCTTCS---SHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------eechhccccC---cHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHHHHHh
Confidence 0111111111 13356789999999999998 68999999999887653
No 184
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.5e-41 Score=328.64 Aligned_cols=244 Identities=24% Similarity=0.365 Sum_probs=201.7
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 15 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 94 (284)
T 2vgo_A 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLE 94 (284)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEE
Confidence 4667889999999999999876 57899999986432 2234678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++.. ...+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.......
T Consensus 95 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~ 168 (284)
T 2vgo_A 95 FAPRGELYKELQK---HGRFDEQRSATFMEELADALHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR 168 (284)
T ss_dssp CCTTEEHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC
T ss_pred eCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCHHHEEEcCCCCEEEecccccccCcccc
Confidence 9999999999974 3568999999999999999999999 999999999999999999999999999987654322
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ..... +..... .+
T Consensus 169 ---~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~------~~~~~-~~~~~~------~~- 231 (284)
T 2vgo_A 169 ---RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHT------ETHRR-IVNVDL------KF- 231 (284)
T ss_dssp ---BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH------HHHHH-HHTTCC------CC-
T ss_pred ---cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHh------HHHHH-Hhcccc------CC-
Confidence 23345899999999999999999999999999999999999999743221 11111 111111 11
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+......+.+++.+||+.||.+|||++|+++
T Consensus 232 ---~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 232 ---PPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp ---CTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ---CCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 1112346789999999999999999999987
No 185
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.4e-41 Score=328.15 Aligned_cols=251 Identities=25% Similarity=0.353 Sum_probs=199.5
Q ss_pred HHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
....|.+.+.||+|+||.||+|... +|+.||+|++.... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3455667899999999999999886 58999999997542 34678899999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++.. ....+++..++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++.......
T Consensus 105 ~~~~~~L~~~~~~--~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (314)
T 3com_A 105 YCGAGSVSDIIRL--RNKTLTEDEIATILQSTLKGLEYLHF---MRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM 179 (314)
T ss_dssp CCTTEEHHHHHHH--HTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB
T ss_pred cCCCCCHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc
Confidence 9999999999863 24678999999999999999999999 999999999999999999999999999998765432
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
.. .....|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... ..... ...........
T Consensus 180 ~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~------~~~~~-~~~~~~~~~~~---- 247 (314)
T 3com_A 180 AK-RNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPM------RAIFM-IPTNPPPTFRK---- 247 (314)
T ss_dssp SC-BCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHH------HHHHH-HHHSCCCCCSS----
T ss_pred cc-cCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChH------HHHHH-HhcCCCcccCC----
Confidence 22 23345899999999999989999999999999999999999999733211 11111 11111111111
Q ss_pred CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 432 GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 432 ~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.......+.+++.+||+.||.+|||+.|+++
T Consensus 248 ---~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 248 ---PELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp ---GGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ---cccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 1112346889999999999999999999986
No 186
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=1.9e-41 Score=328.97 Aligned_cols=258 Identities=27% Similarity=0.398 Sum_probs=197.5
Q ss_pred HHHhhhcccCCCCceEEEEEEec--CCc--EEEEEEecCC---CchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK--DGK--EVAVKIMADS---CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 267 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 267 (517)
..|++.+.||+|+||+||+|++. +++ .||||++... .....+.+.+|++++++++||||+++++++.+.. .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 45677899999999999999864 233 6899998754 2344578999999999999999999999998765 88
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
+|+||+++++|.+++... ...+++..++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++...
T Consensus 97 ~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~ 171 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKH--QGHFLLGTLSRYAVQVAEGMGYLES---KRFIHRDLAARNLLLATRDLVKIGDFGLMRAL 171 (291)
T ss_dssp EEEECCTTCBHHHHHHHH--GGGSCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEEEETTEEEECCCTTCEEC
T ss_pred eeEecccCCCHHHHHHhc--cCCcCHHHHHHHHHHHHHHHHHHHh---CCcccCCCchheEEEcCCCCEEEccccccccc
Confidence 999999999999999753 3568999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcc--cccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 348 EEDLTH--ISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 348 ~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
...... ......++..|+|||.+.+..++.++||||||+++|+|++ |+.||..... .+........+....
T Consensus 172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~------~~~~~~~~~~~~~~~ 245 (291)
T 1u46_A 172 PQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNG------SQILHKIDKEGERLP 245 (291)
T ss_dssp CC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCH------HHHHHHHHTSCCCCC
T ss_pred cccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCH------HHHHHHHHccCCCCC
Confidence 543322 1223446778999999988889999999999999999999 9999974322 122222222211110
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhh
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKI 473 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~ 473 (517)
.....+..+.+++.+||+.||++|||+.++++.|+++...
T Consensus 246 ---------~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~ 285 (291)
T 1u46_A 246 ---------RPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPT 285 (291)
T ss_dssp ---------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC--
T ss_pred ---------CCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCcc
Confidence 1112234688999999999999999999999999987654
No 187
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=8e-41 Score=348.17 Aligned_cols=251 Identities=27% Similarity=0.362 Sum_probs=202.5
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCC--CchhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS--CSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~ 270 (517)
...|++.+.||+|+||+||+|... +++.||||++... .......+.+|++++++++||||+++++++.+.+..++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 457888999999999999999886 7899999998642 2234678899999999999999999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC---CCCcEEEccccCcccc
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD---INMRAKVSDFGLSRQA 347 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~---~~~~~kl~Dfg~a~~~ 347 (517)
||+++|+|.+.+.. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++ .++.+||+|||++...
T Consensus 101 e~~~~~~L~~~~~~---~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~ 174 (486)
T 3mwu_A 101 ELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCF 174 (486)
T ss_dssp CCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTB
T ss_pred EcCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCchHHEEEecCCCCCCEEEEECCcCeEC
Confidence 99999999998874 4579999999999999999999999 9999999999999995 4567999999999876
Q ss_pred CCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccC
Q 010131 348 EEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVD 427 (517)
Q Consensus 348 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 427 (517)
..... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||..... .+... .+..+......
T Consensus 175 ~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~~-~i~~~~~~~~~- 243 (486)
T 3mwu_A 175 QQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDILK-RVETGKYAFDL- 243 (486)
T ss_dssp CCC------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH-HHHHTCCCSCS-
T ss_pred CCCCc--cCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHH-HHHhCCCCCCC-
Confidence 54322 233468999999999976 589999999999999999999999974322 11122 22222211100
Q ss_pred ccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 428 PVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 428 ~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
+. .......+.+++.+||+.||++|||+.|+++.
T Consensus 244 ~~-----~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 244 PQ-----WRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp GG-----GGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred cc-----cCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00 01122367899999999999999999999873
No 188
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.9e-41 Score=338.13 Aligned_cols=261 Identities=19% Similarity=0.244 Sum_probs=197.0
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeec--------CC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEE--------EH 264 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--------~~ 264 (517)
.|.+.+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++.. .+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 5677899999999999999885 789999999865432 234578899999999999999999999876 34
Q ss_pred eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCc
Q 010131 265 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 344 (517)
Q Consensus 265 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 344 (517)
..++||||+++ +|.+.+... ...+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNV--LVKFTLSEIKRVMQMLLNGLYYIHR---NKILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCT--TSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEEeccCC-CHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 68999999975 777777642 3569999999999999999999999 99999999999999999999999999999
Q ss_pred cccCCCC---cccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC
Q 010131 345 RQAEEDL---THISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG 420 (517)
Q Consensus 345 ~~~~~~~---~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 420 (517)
+...... ........||+.|+|||++.+ ..++.++|||||||++|||+||+.||....... ....+.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~ 248 (351)
T 3mi9_A 172 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH---QLALISQLCGSI 248 (351)
T ss_dssp EECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCCC
T ss_pred ccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCCC
Confidence 8764321 122234468999999998876 567999999999999999999999997443221 111111111110
Q ss_pred C---cccccCccc--------cCCCCH-H------HHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 421 D---VISIVDPVL--------IGNVKI-E------SIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 421 ~---~~~~~d~~l--------~~~~~~-~------~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. ....-.... ...... + ....+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 249 TPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp CTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 0 000000000 000000 1 1235789999999999999999999887
No 189
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=3.9e-41 Score=348.01 Aligned_cols=191 Identities=26% Similarity=0.392 Sum_probs=153.0
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeec-----CCeeE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE-----EHQRI 267 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-----~~~~~ 267 (517)
.|.+.+.||+|+||+||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 54 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~ 133 (458)
T 3rp9_A 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELY 133 (458)
T ss_dssp TEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEE
Confidence 5677899999999999999876 68999999987542 2345678999999999999999999999843 35689
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
+||||+ +++|.+++. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 134 lv~e~~-~~~L~~~~~---~~~~l~~~~~~~~~~qi~~aL~~LH~---~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 134 VVLEIA-DSDFKKLFR---TPVYLTELHIKTLLYNLLVGVKYVHS---AGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp EEECCC-SEEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred EEEecc-ccchhhhcc---cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 999998 579999987 45679999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCc--------------------------ccccccccCCCCcCCCcc-CCCCCCccceehhHHHHHHHHHh
Q 010131 348 EEDLT--------------------------HISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELIS 393 (517)
Q Consensus 348 ~~~~~--------------------------~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~ellt 393 (517)
..... .......||+.|+|||++ .+..++.++|||||||++|||+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~ellt 279 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLN 279 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHT
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHH
Confidence 43211 112334689999999975 56779999999999999999999
No 190
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1.6e-41 Score=328.63 Aligned_cols=245 Identities=21% Similarity=0.292 Sum_probs=198.9
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 269 (517)
...|.+.+.||+|+||+||+|... +++.||+|++.... ......+.+|+..+.++ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456777899999999999999886 79999999987542 33456788999999999 999999999999999999999
Q ss_pred EEecCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC---------------
Q 010131 270 YEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN--------------- 333 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~--------------- 333 (517)
|||+++++|.+++.... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++.+
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHS---MSLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 99999999999997532 12568999999999999999999999 999999999999999844
Q ss_pred ----CcEEEccccCccccCCCCcccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCCCCcccccc
Q 010131 334 ----MRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELN 408 (517)
Q Consensus 334 ----~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~ 408 (517)
..+||+|||.+....... ...||+.|+|||.+.+. .++.++|||||||++|+|++|.+++....
T Consensus 167 ~~~~~~~kl~Dfg~~~~~~~~~-----~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~------ 235 (289)
T 1x8b_A 167 ASNKVMFKIGDLGHVTRISSPQ-----VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD------ 235 (289)
T ss_dssp ---CCCEEECCCTTCEETTCSC-----CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH------
T ss_pred cCCceEEEEcccccccccCCcc-----ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh------
Confidence 479999999998765432 23489999999998765 66789999999999999999998765211
Q ss_pred HHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 409 IVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 409 ~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. ...+..+..... .. .....+.+++.+||+.||++|||+.|+++
T Consensus 236 ~----~~~~~~~~~~~~-----~~----~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 236 Q----WHEIRQGRLPRI-----PQ----VLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp H----HHHHHTTCCCCC-----SS----CCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H----HHHHHcCCCCCC-----Cc----ccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 1 112222222111 11 12246889999999999999999999875
No 191
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=8e-41 Score=348.55 Aligned_cols=251 Identities=23% Similarity=0.311 Sum_probs=202.4
Q ss_pred hhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 198 NFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 198 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
.+.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 188 ~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~ 267 (543)
T 3c4z_A 188 LDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIM 267 (543)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCC
T ss_pred EEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEec
Confidence 34577999999999999986 69999999996532 233467889999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCc
Q 010131 274 HNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLT 352 (517)
Q Consensus 274 ~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~ 352 (517)
+||+|.+++.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++.......
T Consensus 268 ~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~---~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~ 344 (543)
T 3c4z_A 268 NGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQ---RNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344 (543)
T ss_dssp TTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC
T ss_pred cCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHH---cCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc
Confidence 9999999987543 24579999999999999999999999 9999999999999999999999999999987654332
Q ss_pred ccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccC
Q 010131 353 HISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIG 432 (517)
Q Consensus 353 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~ 432 (517)
. .....||+.|+|||++.+..++.++|||||||++|||+||+.||...... ....+....... +..
T Consensus 345 ~-~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~--~~~~~~~~~i~~-~~~---------- 410 (543)
T 3c4z_A 345 K-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK--VENKELKQRVLE-QAV---------- 410 (543)
T ss_dssp C-BCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC--CCHHHHHHHHHH-CCC----------
T ss_pred c-cccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc--hhHHHHHHHHhh-ccc----------
Confidence 2 23346999999999999999999999999999999999999999744321 112222222222 111
Q ss_pred CCCHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q 010131 433 NVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 465 (517)
Q Consensus 433 ~~~~~~~~~l~~li~~cl~~~P~~RPs~-----~evl~ 465 (517)
.++......+.+++.+||+.||++||++ ++|++
T Consensus 411 ~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 411 TYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp CCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred CCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 0111123467899999999999999975 55553
No 192
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=1.2e-40 Score=347.45 Aligned_cols=257 Identities=27% Similarity=0.392 Sum_probs=202.0
Q ss_pred HHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEE
Q 010131 193 EEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 193 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
....|.+.+.||+|+||+||+|+.. ++..||+|++.... ......+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3457888999999999999999886 68899999987543 23356789999999999999999999999999999999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC---CcEEEccccCccc
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLSRQ 346 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a~~ 346 (517)
|||+++|+|.+++.. ...+++..+..++.||+.||+|||+ .+|+||||||+|||++.. +.+||+|||++..
T Consensus 115 ~e~~~~g~L~~~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~ 188 (494)
T 3lij_A 115 MECYKGGELFDEIIH---RMKFNEVDAAVIIKQVLSGVTYLHK---HNIVHRDLKPENLLLESKEKDALIKIVDFGLSAV 188 (494)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCChhhEEEeCCCCCCcEEEEECCCCeE
Confidence 999999999998874 4568999999999999999999999 999999999999999764 5599999999987
Q ss_pred cCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
...... .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... +.. ..+..+.... .
T Consensus 189 ~~~~~~--~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~-~~i~~~~~~~-~ 257 (494)
T 3lij_A 189 FENQKK--MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPFGGQTDQ------EIL-RKVEKGKYTF-D 257 (494)
T ss_dssp CBTTBC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHHHHTCCCC-C
T ss_pred CCCCcc--ccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCCCCCCHH------HHH-HHHHhCCCCC-C
Confidence 654322 234568999999999874 6899999999999999999999999743321 111 2222222110 0
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH--HHhhh
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA--IQDSI 471 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~--L~~~~ 471 (517)
.+. ... ....+.+++.+||+.||.+|||+.|+++. +++..
T Consensus 258 ~~~-~~~----~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~ 299 (494)
T 3lij_A 258 SPE-WKN----VSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMC 299 (494)
T ss_dssp SGG-GTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHH
T ss_pred chh-ccc----CCHHHHHHHHHHCCCChhhCccHHHHhcCcccccCc
Confidence 111 111 22367899999999999999999999863 55443
No 193
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-41 Score=335.26 Aligned_cols=262 Identities=21% Similarity=0.215 Sum_probs=196.6
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchh-----HHHHHHHHHHHhcCCCCCccccceeeecCCeeEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHR-----TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRIL 268 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 268 (517)
..|.+.+.||+|+||.||+|... +|+.||||++....... .+.+.+|++++++++||||+++++++.+.+..++
T Consensus 10 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 89 (346)
T 1ua2_A 10 KRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISL 89 (346)
T ss_dssp ---CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEE
T ss_pred cccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEE
Confidence 46777899999999999999886 58999999986432211 2467899999999999999999999999999999
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
||||+++ +|.+++.. ....+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++...
T Consensus 90 v~e~~~~-~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (346)
T 1ua2_A 90 VFDFMET-DLEVIIKD--NSLVLTPSHIKAYMLMTLQGLEYLHQ---HWILHRDLKPNNLLLDENGVLKLADFGLAKSFG 163 (346)
T ss_dssp EEECCSE-EHHHHHTT--CCSSCCSSHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECCCGGGSTTT
T ss_pred EEEcCCC-CHHHHHHh--cCcCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEEcCCCCEEEEecccceecc
Confidence 9999975 88888864 24568889999999999999999999 999999999999999999999999999998765
Q ss_pred CCCcccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc-
Q 010131 349 EDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV- 426 (517)
Q Consensus 349 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 426 (517)
.... ......||+.|+|||.+.+. .++.++|||||||++|||++|..||...+... ....+...........+.
T Consensus 164 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~---~~~~i~~~~~~~~~~~~~~ 239 (346)
T 1ua2_A 164 SPNR-AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD---QLTRIFETLGTPTEEQWPD 239 (346)
T ss_dssp SCCC-CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH---HHHHHHHHHCCCCTTTSSS
T ss_pred CCcc-cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH---HHHHHHHHcCCCChhhhhh
Confidence 4322 22334589999999998654 58899999999999999999999997433211 111111111110000000
Q ss_pred -----Cccc---cCCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 427 -----DPVL---IGNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 427 -----d~~l---~~~~~-----~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
+... ....+ ......+.+++.+||+.||++|||++|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 292 (346)
T 1ua2_A 240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 292 (346)
T ss_dssp TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTS
T ss_pred hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcC
Confidence 0000 00001 1223578899999999999999999999873
No 194
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=5.3e-41 Score=349.51 Aligned_cols=252 Identities=27% Similarity=0.377 Sum_probs=205.9
Q ss_pred HHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeE
Q 010131 192 LEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 267 (517)
Q Consensus 192 l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 267 (517)
.....|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..+
T Consensus 23 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 102 (484)
T 3nyv_A 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFY 102 (484)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEE
T ss_pred cccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 34567888999999999999999886 78999999986532 345678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe---CCCCcEEEccccCc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL---DINMRAKVSDFGLS 344 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill---~~~~~~kl~Dfg~a 344 (517)
+||||+.+|+|.+++. ....+++..++.++.|++.||+|||+ .+|+||||||+||++ +.++.+||+|||++
T Consensus 103 lv~e~~~~~~L~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a 176 (484)
T 3nyv_A 103 LVGEVYTGGELFDEII---SRKRFSEVDAARIIRQVLSGITYMHK---NKIVHRDLKPENLLLESKSKDANIRIIDFGLS 176 (484)
T ss_dssp EEECCCCSCBHHHHHH---TCSCCBHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESSSSTTCCEEECCTTHH
T ss_pred EEEecCCCCCHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEecCCCCCcEEEEeeeee
Confidence 9999999999999987 45679999999999999999999999 999999999999999 56789999999999
Q ss_pred cccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 345 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 345 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
........ .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...+. .+.. ..+..+....
T Consensus 177 ~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~------~~~~-~~i~~~~~~~ 246 (484)
T 3nyv_A 177 THFEASKK--MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPPFNGANE------YDIL-KKVEKGKYTF 246 (484)
T ss_dssp HHBCCCCS--HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-HHHHHCCCCC
T ss_pred EEcccccc--cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCCCCCCCH------HHHH-HHHHcCCCCC
Confidence 87654332 223458999999999876 689999999999999999999999974332 1111 2222222211
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.. +. .......+.+++.+||+.||++|||+.|+++
T Consensus 247 ~~-~~-----~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 247 EL-PQ-----WKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CS-GG-----GGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CC-cc-----cccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 00 00 0112346789999999999999999999986
No 195
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.7e-41 Score=340.14 Aligned_cols=254 Identities=22% Similarity=0.298 Sum_probs=191.9
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCC------ee
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 266 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~ 266 (517)
.|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+ ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~ 105 (367)
T 1cm8_A 26 VYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDF 105 (367)
T ss_dssp SEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCC
T ss_pred eEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceE
Confidence 4566789999999999999875 69999999986532 233567899999999999999999999987653 45
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||+ +++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 106 ~lv~e~~-~~~L~~~~~~----~~l~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~ 177 (367)
T 1cm8_A 106 YLVMPFM-GTDLGKLMKH----EKLGEDRIQFLVYQMLKGLRYIHA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQ 177 (367)
T ss_dssp EEEEECC-SEEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred EEEEecC-CCCHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHH---CCccccCcCHHHEEEcCCCCEEEEeeecccc
Confidence 9999999 8899999873 468999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCcccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCC----
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD---- 421 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 421 (517)
.... .....+|+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+..+. ...+........
T Consensus 178 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~---l~~i~~~~g~~~~~~~ 250 (367)
T 1cm8_A 178 ADSE----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQ---LKEIMKVTGTPPAEFV 250 (367)
T ss_dssp CCSS----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHH---HHHHHHHHCCCCHHHH
T ss_pred cccc----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHH---HHHHHHhcCCCCHHHH
Confidence 6543 233458999999999876 6899999999999999999999999975432211 111111000000
Q ss_pred --------------cccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 422 --------------VISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 422 --------------~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
........+ ..........+.+++.+||+.||++|||++|+++
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 251 QRLQSDEAKNYMKGLPELEKKDF-ASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HTCSCHHHHHHHHHSCCCCCCCG-GGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHhhhHHHHHHHHhCCCCCCCCH-HHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 000000000 0011122346889999999999999999999987
No 196
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=8.8e-41 Score=321.72 Aligned_cols=246 Identities=24% Similarity=0.381 Sum_probs=194.4
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 91 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVME 91 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEe
Confidence 4566789999999999999986 79999999986432 2235678999999999999999999999999999999999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++.. ...+++..++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 165 (276)
T 2h6d_A 92 YVSGGELFDYICK---HGRVEEMEARRLFQQILSAVDYCHR---HMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE 165 (276)
T ss_dssp CCCSCBHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC--
T ss_pred ccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCChhhEEECCCCCEEEeecccccccCCCc
Confidence 9999999999974 3568999999999999999999999 999999999999999999999999999998765432
Q ss_pred cccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVL 430 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l 430 (517)
. .....+++.|+|||.+.+..+ +.++||||||+++|+|++|+.||..... .. ....+..+... +
T Consensus 166 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~-~~~~~~~~~~~------~ 230 (276)
T 2h6d_A 166 F--LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV------PT-LFKKIRGGVFY------I 230 (276)
T ss_dssp -------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH------HH-HHHHHHHCCCC------C
T ss_pred c--eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HH-HHHHhhcCccc------C
Confidence 2 223458899999999987765 6899999999999999999999974321 11 11222222110 0
Q ss_pred cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 431 IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 431 ~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
+......+.+++.+||+.||++|||+.|+++.
T Consensus 231 ----~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 231 ----PEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp ----CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred ----chhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 11122367899999999999999999999873
No 197
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=1.9e-42 Score=348.77 Aligned_cols=247 Identities=16% Similarity=0.145 Sum_probs=189.7
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCC---CchhHHHHHHHHH---HHhcCCCCCccccc-------eeee
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVA---LLSRIHHRNLVPLI-------GYCE 261 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~---~l~~l~h~niv~~~-------~~~~ 261 (517)
.|.+.+.||+|+||.||+|++. +|+.||||++... .....+.+.+|+. .+++++||||++++ +++.
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~ 153 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 153 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence 3456789999999999999974 6999999999742 3345678999995 55555899999998 5555
Q ss_pred cCC-----------------eeEEEEEecCCCCHHhHhhccC----CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEe
Q 010131 262 EEH-----------------QRILVYEYMHNGTLRDRLHGSV----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIH 320 (517)
Q Consensus 262 ~~~-----------------~~~lv~e~~~~gsL~~~l~~~~----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH 320 (517)
+.+ ..++||||+ +|+|.+++.... ....+++..++.++.||+.||+|||+ .+|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH 229 (377)
T 3byv_A 154 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVH 229 (377)
T ss_dssp CTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHH---TTEEC
T ss_pred ccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence 443 278999999 689999997532 12345568889999999999999999 99999
Q ss_pred cCCCCCCeEeCCCCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCC-----------CCCccceehhHHHHHH
Q 010131 321 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-----------QLTEKSDVYSFGVVLL 389 (517)
Q Consensus 321 ~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----------~~~~~~Dv~slG~~l~ 389 (517)
|||||+|||++.++.+||+|||+++.... ......| +.|+|||++.+. .++.++|||||||++|
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~ 304 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIY 304 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHH
Confidence 99999999999999999999999986443 2233457 999999999877 8999999999999999
Q ss_pred HHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH--HH
Q 010131 390 ELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL--AI 467 (517)
Q Consensus 390 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~--~L 467 (517)
||++|+.||......... ..+.. . ... .+..+.+++.+||+.||++|||+.|+++ .+
T Consensus 305 elltg~~Pf~~~~~~~~~---------------~~~~~-~-~~~----~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f 363 (377)
T 3byv_A 305 WIWCADLPITKDAALGGS---------------EWIFR-S-CKN----IPQPVRALLEGFLRYPKEDRLLPLQAMETPEY 363 (377)
T ss_dssp HHHHSSCCC------CCS---------------GGGGS-S-CCC----CCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHH
T ss_pred HHHHCCCCCcccccccch---------------hhhhh-h-ccC----CCHHHHHHHHHHcCCCchhCCCHHHHhhChHH
Confidence 999999999743321110 00000 0 011 1246889999999999999999999986 45
Q ss_pred Hhhhh
Q 010131 468 QDSIK 472 (517)
Q Consensus 468 ~~~~~ 472 (517)
+++..
T Consensus 364 ~~~~~ 368 (377)
T 3byv_A 364 EQLRT 368 (377)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 198
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=1.3e-40 Score=333.54 Aligned_cols=250 Identities=26% Similarity=0.374 Sum_probs=200.5
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--------hhHHHHHHHHHHHhcC-CCCCccccceeeecCC
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEH 264 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~ 264 (517)
..|.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++++ +||||+++++++...+
T Consensus 94 ~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 173 (365)
T 2y7j_A 94 QKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS 173 (365)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS
T ss_pred hhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC
Confidence 34556789999999999999986 799999999875431 1135688999999999 7999999999999999
Q ss_pred eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCc
Q 010131 265 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 344 (517)
Q Consensus 265 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 344 (517)
..++||||+++++|.+++.. ...+++..+..++.||+.||.|||+ .|++|+||||+||+++.++.+||+|||++
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~ 247 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTE---KVALSEKETRSIMRSLLEAVSFLHA---NNIVHRDLKPENILLDDNMQIRLSDFGFS 247 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred EEEEEEEeCCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEEecCcc
Confidence 99999999999999999974 4579999999999999999999999 99999999999999999999999999999
Q ss_pred cccCCCCcccccccccCCCCcCCCccC------CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHh
Q 010131 345 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 418 (517)
Q Consensus 345 ~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 418 (517)
........ .....||+.|+|||++. ...++.++|||||||++|+|++|+.||..... .... ..+.
T Consensus 248 ~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~------~~~~-~~i~ 318 (365)
T 2y7j_A 248 CHLEPGEK--LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQ------ILML-RMIM 318 (365)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-HHHH
T ss_pred cccCCCcc--cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCH------HHHH-HHHH
Confidence 87654322 23356899999999875 33688899999999999999999999973321 1111 1122
Q ss_pred cCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 419 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 419 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.+.... ..+.. . .....+.+++.+||+.||++|||+.|+++
T Consensus 319 ~~~~~~-~~~~~-~----~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 319 EGQYQF-SSPEW-D----DRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HTCCCC-CHHHH-S----SSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred hCCCCC-CCccc-c----cCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 221110 00000 0 11235889999999999999999999986
No 199
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=3.2e-41 Score=327.16 Aligned_cols=251 Identities=21% Similarity=0.306 Sum_probs=186.0
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCch-h-HHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-R-TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
..|++.+.||+|+||+||+|... +|+.||||++...... . .+.+.++...++.++||||+++++++.+.+..++|||
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e 86 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICME 86 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEe
Confidence 45667899999999999999875 7899999999754322 2 2334555556888899999999999999999999999
Q ss_pred ecCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 272 YMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|++ |+|.+++.... ....+++..++.++.|++.||+|||+ . +++||||||+||+++.++.+||+|||++.....
T Consensus 87 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 162 (290)
T 3fme_A 87 LMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVD 162 (290)
T ss_dssp CCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH---HSCCCCCCCSGGGCEECTTCCEEBCCC--------
T ss_pred hhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeecCCcccccc
Confidence 997 58877775422 35679999999999999999999999 7 999999999999999999999999999987654
Q ss_pred CCcccccccccCCCCcCCCcc----CCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 350 DLTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
... .....||+.|+|||.+ .+..++.++||||||+++|+|+||+.||...... ............. ..
T Consensus 163 ~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~-~~ 234 (290)
T 3fme_A 163 DVA--KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP-----FQQLKQVVEEPSP-QL 234 (290)
T ss_dssp ---------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCH-----HHHHHHHHHSCCC-CC
T ss_pred ccc--ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCch-----HHHHHHHhccCCC-Cc
Confidence 322 2233589999999995 5667899999999999999999999999732211 1112222222211 11
Q ss_pred cCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 426 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 426 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. .......+.+++.+||+.||++|||++|+++
T Consensus 235 ~--------~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 235 P--------ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp C--------TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c--------cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 1 0112346889999999999999999999987
No 200
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.4e-41 Score=342.54 Aligned_cols=197 Identities=25% Similarity=0.354 Sum_probs=165.7
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecC-----CeeE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRI 267 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~ 267 (517)
.|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|++++++++||||+++++++... ...+
T Consensus 27 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~ 106 (432)
T 3n9x_A 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELY 106 (432)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEE
T ss_pred CEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEE
Confidence 4667899999999999999876 58899999997542 23456789999999999999999999998765 5689
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
+||||++ |+|.+++. ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++..
T Consensus 107 lv~e~~~-~~L~~~~~---~~~~l~~~~~~~i~~qil~aL~~LH~---~givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 107 IVLEIAD-SDLKKLFK---TPIFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp EEEECCS-EEHHHHHH---SSCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEecCC-cCHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 9999986 69999997 45679999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcc---------------------cccccccCCCCcCCCcc-CCCCCCccceehhHHHHHHHHHhCCCCCC
Q 010131 348 EEDLTH---------------------ISSVARGTVGYLDPEYY-GNQQLTEKSDVYSFGVVLLELISGKKPVS 399 (517)
Q Consensus 348 ~~~~~~---------------------~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~slG~~l~elltg~~p~~ 399 (517)
...... ......||+.|+|||++ .+..++.++||||+||++|||++|..||.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 443211 12445689999999985 56679999999999999999998655554
No 201
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1.3e-40 Score=329.09 Aligned_cols=256 Identities=20% Similarity=0.290 Sum_probs=197.6
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-CCCccccceeeec--CCeeEEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEE--EHQRILVY 270 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~--~~~~~lv~ 270 (517)
..|.+.+.||+|+||+||+|... +++.||||++... ..+.+.+|+.++++++ ||||+++++++.+ ....++||
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 45667899999999999999864 7899999998743 3567899999999997 9999999999987 66789999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC-cEEEccccCccccCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM-RAKVSDFGLSRQAEE 349 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~-~~kl~Dfg~a~~~~~ 349 (517)
||+++++|.+++. .+++..+..++.|++.||+|||+ .+|+||||||+|||++.++ .+||+|||+++....
T Consensus 113 e~~~~~~l~~~~~------~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~ 183 (330)
T 3nsz_A 113 EHVNNTDFKQLYQ------TLTDYDIRFYMYEILKALDYCHS---MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP 183 (330)
T ss_dssp ECCCCCCHHHHGG------GCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred eccCchhHHHHHH------hCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCC
Confidence 9999999999885 38899999999999999999999 9999999999999999776 899999999987654
Q ss_pred CCcccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHH--------HHHhcC
Q 010131 350 DLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWAR--------SMIKKG 420 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 420 (517)
... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||...... ...+..... ..+...
T Consensus 184 ~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~~ 260 (330)
T 3nsz_A 184 GQE--YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVRIAKVLGTEDLYDYIDKY 260 (330)
T ss_dssp TCC--CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSH-HHHHHHHHHHHCHHHHHHHHHHT
T ss_pred CCc--cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCch-HHHHHHHHHhcCCchhhhHHHHh
Confidence 332 233458899999999877 67899999999999999999999999532211 111111110 001100
Q ss_pred Cc--------------ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 421 DV--------------ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 421 ~~--------------~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.. ....+..............+.+++.+||+.||++|||++|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 0000000111111123457889999999999999999999986
No 202
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=6.6e-41 Score=330.16 Aligned_cols=254 Identities=26% Similarity=0.351 Sum_probs=198.4
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--------hhHHHHHHHHHHHhcCCCCCccccceeee
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--------HRTQQFVTEVALLSRIHHRNLVPLIGYCE 261 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 261 (517)
......|.+.+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 344567888999999999999999876 588999999865321 12245889999999999999999999987
Q ss_pred cCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc---EEE
Q 010131 262 EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKV 338 (517)
Q Consensus 262 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl 338 (517)
..+ .++||||+++++|.+++. ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++. +||
T Consensus 86 ~~~-~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~~~~kl 158 (322)
T 2ycf_A 86 AED-YYIVLELMEGGELFDKVV---GNKRLKEATCKLYFYQMLLAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLIKI 158 (322)
T ss_dssp SSS-EEEEEECCTTEETHHHHS---TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSSSCCEEE
T ss_pred CCc-eEEEEecCCCCcHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEecCCCCCeEEE
Confidence 665 899999999999999987 45679999999999999999999999 99999999999999987654 999
Q ss_pred ccccCccccCCCCcccccccccCCCCcCCCcc---CCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHH
Q 010131 339 SDFGLSRQAEEDLTHISSVARGTVGYLDPEYY---GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS 415 (517)
Q Consensus 339 ~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~ 415 (517)
+|||++........ .....||+.|+|||++ ....++.++|||||||++|+|++|+.||....... .+..
T Consensus 159 ~Dfg~~~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~--~~~~---- 230 (322)
T 2ycf_A 159 TDFGHSKILGETSL--MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV--SLKD---- 230 (322)
T ss_dssp CCCTTCEECCCCHH--HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS--CHHH----
T ss_pred ccCccceecccccc--cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH--HHHH----
Confidence 99999987654321 2234589999999986 35678999999999999999999999997433221 2222
Q ss_pred HHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 416 MIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 416 ~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.+..+.... .+.... .....+.+++.+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~--~~~~~~----~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 231 QITSGKYNF--IPEVWA----EVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHTCCCC--CHHHHT----TSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHhCcccc--Cchhhh----hcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 122222110 000001 12346889999999999999999999984
No 203
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=5.9e-41 Score=340.14 Aligned_cols=269 Identities=21% Similarity=0.262 Sum_probs=205.9
Q ss_pred cChhHHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCC--------CCCccccc
Q 010131 187 IPLPELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH--------HRNLVPLI 257 (517)
Q Consensus 187 ~~~~~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------h~niv~~~ 257 (517)
+...++....|.+.++||+|+||+||+|+.. +++.||||++... ....+.+.+|+.++++++ |+||++++
T Consensus 29 ~~~g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~ 107 (397)
T 1wak_A 29 VKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLL 107 (397)
T ss_dssp SCTTCEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEE
T ss_pred EehhhhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeee
Confidence 3344444567888899999999999999865 6889999999743 344577889999999985 78899999
Q ss_pred eeee----cCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CcEecCCCCCCeEeCC
Q 010131 258 GYCE----EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDI 332 (517)
Q Consensus 258 ~~~~----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~-~ivH~dlk~~Nill~~ 332 (517)
+++. .....++||||+ +++|.+++... ....+++..++.++.||+.||+|||+ + +|+||||||+|||++.
T Consensus 108 ~~~~~~~~~~~~~~lv~e~~-~~~l~~~~~~~-~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIll~~ 182 (397)
T 1wak_A 108 DDFKISGVNGTHICMVFEVL-GHHLLKWIIKS-NYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENILLSV 182 (397)
T ss_dssp EEEEEEETTEEEEEEEECCC-CCBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEEECC
T ss_pred cceeecCCCCceEEEEEecc-CccHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHeeEec
Confidence 9987 556789999999 66666666543 23569999999999999999999999 8 9999999999999997
Q ss_pred CC-------------------------------------------------cEEEccccCccccCCCCcccccccccCCC
Q 010131 333 NM-------------------------------------------------RAKVSDFGLSRQAEEDLTHISSVARGTVG 363 (517)
Q Consensus 333 ~~-------------------------------------------------~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~ 363 (517)
++ .+||+|||++....... ....||+.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~----~~~~gt~~ 258 (397)
T 1wak_A 183 NEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHF----TEDIQTRQ 258 (397)
T ss_dssp CHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCS----CSCCSCGG
T ss_pred cchhhhhhhhhhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEeccccccccccccC----ccCCCCCc
Confidence 75 79999999998765432 23458999
Q ss_pred CcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHH---HHHHhc--------CCcc-cccCc---
Q 010131 364 YLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWA---RSMIKK--------GDVI-SIVDP--- 428 (517)
Q Consensus 364 y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~---~~~~~~--------~~~~-~~~d~--- 428 (517)
|+|||++.+..++.++|||||||++|||+||+.||...+........... ...... +... .....
T Consensus 259 y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 338 (397)
T 1wak_A 259 YRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGD 338 (397)
T ss_dssp GCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSS
T ss_pred ccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccc
Confidence 99999999989999999999999999999999999754433222111111 111110 0000 00000
Q ss_pred -------cc---------cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 429 -------VL---------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 429 -------~l---------~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.. ...........+.+|+.+||+.||++|||++|+++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 339 LKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp BSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred cccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 00 01234566778999999999999999999999985
No 204
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=1.8e-40 Score=346.98 Aligned_cols=249 Identities=27% Similarity=0.359 Sum_probs=199.3
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-------------hhHHHHHHHHHHHhcCCCCCccccceee
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 260 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~h~niv~~~~~~ 260 (517)
..|.+.++||+|+||+||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++
T Consensus 36 ~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~ 115 (504)
T 3q5i_A 36 ESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF 115 (504)
T ss_dssp GTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE
T ss_pred cceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE
Confidence 35677899999999999999876 588999999875421 2346789999999999999999999999
Q ss_pred ecCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC---cEE
Q 010131 261 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM---RAK 337 (517)
Q Consensus 261 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~---~~k 337 (517)
.+.+..++||||+++|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+||+++.++ .+|
T Consensus 116 ~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 116 EDKKYFYLVTEFYEGGELFEQIIN---RHKFDECDAANIMKQILSGICYLHK---HNIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp ECSSEEEEEEECCTTCBHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESSTTCCSSEE
T ss_pred EcCCEEEEEEecCCCCcHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCcHHHEEEecCCCCccEE
Confidence 999999999999999999999874 4569999999999999999999999 9999999999999998776 699
Q ss_pred EccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHH
Q 010131 338 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMI 417 (517)
Q Consensus 338 l~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~ 417 (517)
|+|||++........ .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||...... +.. ..+
T Consensus 190 l~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~~~~~~------~~~-~~i 259 (504)
T 3q5i_A 190 IVDFGLSSFFSKDYK--LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ------DII-KKV 259 (504)
T ss_dssp ECCCTTCEECCTTSC--BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH------HHH-HHH
T ss_pred EEECCCCEEcCCCCc--cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHHHHHHhCCCCCCCCCHH------HHH-HHH
Confidence 999999987654322 234468999999999875 6899999999999999999999999743321 111 222
Q ss_pred hcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 418 KKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 418 ~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
..+...... ..... ....+.+++.+||+.||.+|||++|+++
T Consensus 260 ~~~~~~~~~--~~~~~----~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 260 EKGKYYFDF--NDWKN----ISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp HHCCCCCCH--HHHTT----SCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HcCCCCCCc--cccCC----CCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 222211000 00011 1236889999999999999999999986
No 205
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=1.3e-41 Score=332.00 Aligned_cols=257 Identities=25% Similarity=0.348 Sum_probs=183.9
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
..|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||
T Consensus 15 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 94 (303)
T 2vwi_A 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKL 94 (303)
T ss_dssp CCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEEC
T ss_pred hhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehh
Confidence 34566789999999999999865 68999999986432 23456788999999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccC-----CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 273 MHNGTLRDRLHGSV-----NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 273 ~~~gsL~~~l~~~~-----~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
+++++|.+++.... ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++...
T Consensus 95 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~ 171 (303)
T 2vwi_A 95 LSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHK---NGQIHRDVKAGNILLGEDGSVQIADFGVSAFL 171 (303)
T ss_dssp CTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCHHHHHC
T ss_pred ccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCCCCChhhEEEcCCCCEEEEeccchhee
Confidence 99999999986421 24568999999999999999999999 99999999999999999999999999998765
Q ss_pred CCCCc----ccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 348 EEDLT----HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 348 ~~~~~----~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
..... .......||+.|+|||.+.+ ..++.++||||||+++|+|++|+.||....... .. ..... +..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~---~~~~~-~~~ 244 (303)
T 2vwi_A 172 ATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK---VL---MLTLQ-NDP 244 (303)
T ss_dssp C---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG---HH---HHHHT-SSC
T ss_pred ccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh---HH---HHHhc-cCC
Confidence 43211 11233458999999999865 468899999999999999999999997433221 11 11111 111
Q ss_pred cc----ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 423 IS----IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 423 ~~----~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.. ..++..... ....+.+++.+||+.||++|||+.|+++
T Consensus 245 ~~~~~~~~~~~~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 245 PSLETGVQDKEMLKK----YGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp CCTTC-----CCCCC----CCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred Cccccccccchhhhh----hhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 11 111111112 2346789999999999999999999986
No 206
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=7.2e-41 Score=358.91 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=207.2
Q ss_pred HHHHHHhhhcccCCCCceEEEEEEecC----CcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCee
Q 010131 192 LEEATNNFCKKIGKGSFGSVYYGKMKD----GKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR 266 (517)
Q Consensus 192 l~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~ 266 (517)
+....+.+.+.||+|+||.||+|.+.. +..||||.+..... ...+.+.+|+.++++++||||+++++++.+ +..
T Consensus 387 i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~ 465 (656)
T 2j0j_A 387 IQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITE-NPV 465 (656)
T ss_dssp CCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSC
T ss_pred cccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-Cce
Confidence 334567778999999999999998752 46799999875433 344679999999999999999999999854 568
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 466 ~lv~E~~~~g~L~~~l~~~--~~~l~~~~~~~i~~qi~~aL~~LH~---~givHrDikp~NILl~~~~~vkL~DFG~a~~ 540 (656)
T 2j0j_A 466 WIIMELCTLGELRSFLQVR--KFSLDLASLILYAYQLSTALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 540 (656)
T ss_dssp EEEEECCTTCBHHHHHHHT--TTTCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEEEETTEEEECCCCCCCS
T ss_pred EEEEEcCCCCcHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchHhEEEeCCCCEEEEecCCCee
Confidence 9999999999999999753 4568999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
.............+++.|+|||.+.+..++.++|||||||++|||++ |..||...... +.. ..+..+....
T Consensus 541 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~------~~~-~~i~~~~~~~- 612 (656)
T 2j0j_A 541 MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN------DVI-GRIENGERLP- 612 (656)
T ss_dssp CCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHH------HHH-HHHHHTCCCC-
T ss_pred cCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHH------HHH-HHHHcCCCCC-
Confidence 75543333334456789999999988899999999999999999997 99999743221 111 1222222111
Q ss_pred cCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 426 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 426 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
.+...+..+.+++.+||+.||++|||+.|+++.|+++.+.+
T Consensus 613 --------~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il~~~ 653 (656)
T 2j0j_A 613 --------MPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTILEEE 653 (656)
T ss_dssp --------CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHH
T ss_pred --------CCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHHHh
Confidence 11122346889999999999999999999999999988654
No 207
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=5.1e-40 Score=321.14 Aligned_cols=249 Identities=24% Similarity=0.344 Sum_probs=196.3
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC----chhHHHHHHHHHHHhcCCCCCccccceee--ecCCeeEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC----SHRTQQFVTEVALLSRIHHRNLVPLIGYC--EEEHQRIL 268 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~--~~~~~~~l 268 (517)
.|.+.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++ .+.+..++
T Consensus 6 ~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (305)
T 2wtk_C 6 KYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYM 85 (305)
T ss_dssp CBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEE
T ss_pred ceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEE
Confidence 3566789999999999999875 68899999986532 23457799999999999999999999998 44567899
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
||||++++ |.+++... ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++....
T Consensus 86 v~e~~~~~-l~~~~~~~-~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 86 VMEYCVCG-MQEMLDSV-PEKRFPVCQAHGYFCQLIDGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EEECCSEE-HHHHHHHS-TTCSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EehhccCC-HHHHHHhC-cccccCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 99999876 77777643 35679999999999999999999999 999999999999999999999999999998764
Q ss_pred CCC-cccccccccCCCCcCCCccCCCC--CCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 349 EDL-THISSVARGTVGYLDPEYYGNQQ--LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 349 ~~~-~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
... ........|++.|+|||++.+.. .+.++||||||+++|||++|+.||..... .+.. ..+..+...
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~-~~i~~~~~~-- 231 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI------YKLF-ENIGKGSYA-- 231 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH------HHHH-HHHHHCCCC--
T ss_pred ccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH------HHHH-HHHhcCCCC--
Confidence 322 22223445899999999987644 47899999999999999999999974321 1111 222222211
Q ss_pred cCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 426 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 426 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
+.. .....+.+++.+||+.||++|||++|+++.
T Consensus 232 ----~~~----~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 232 ----IPG----DCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp ----CCS----SSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred ----CCC----ccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 111 123467899999999999999999999863
No 208
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.1e-40 Score=322.93 Aligned_cols=258 Identities=21% Similarity=0.306 Sum_probs=197.4
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEec
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEYM 273 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 273 (517)
|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 5 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (299)
T 2r3i_A 5 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL 84 (299)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEcc
Confidence 456789999999999999886 689999999865432 22367889999999999999999999999999999999999
Q ss_pred CCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcc
Q 010131 274 HNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTH 353 (517)
Q Consensus 274 ~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~ 353 (517)
+ ++|.+++... ....+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|||++.........
T Consensus 85 ~-~~L~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 85 H-QDLKKFMDAS-ALTGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp S-EEHHHHHHHT-TTTCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred c-CCHHHHHHhh-hccCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 7 6999998754 23568999999999999999999999 99999999999999999999999999999876433221
Q ss_pred cccccccCCCCcCCCccCCCC-CCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc-------
Q 010131 354 ISSVARGTVGYLDPEYYGNQQ-LTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI------- 425 (517)
Q Consensus 354 ~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 425 (517)
.....+++.|+|||.+.+.. ++.++||||||+++|+|+||+.||...+..+ .... +.... +.....
T Consensus 160 -~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~--~~~~-~~~~~--~~~~~~~~~~~~~ 233 (299)
T 2r3i_A 160 -YTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID--QLFR-IFRTL--GTPDEVVWPGVTS 233 (299)
T ss_dssp -TTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH--HHHH-HHHHH--CCCCTTTSTTGGG
T ss_pred -cCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH--HHHH-HHHHh--CCCchhhhhHhhc
Confidence 22345799999999987765 7899999999999999999999997433211 1111 11111 110000
Q ss_pred ---cCccccC----CC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 426 ---VDPVLIG----NV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 426 ---~d~~l~~----~~---~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
..+.... .. .......+.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 234 MPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp STTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000000 00 0112346789999999999999999999986
No 209
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.5e-40 Score=330.23 Aligned_cols=250 Identities=21% Similarity=0.332 Sum_probs=196.8
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-chhHHHHHHHHHH-HhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVAL-LSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
.|++.+.||+|+||.||+|... +|+.||||++.... ......+..|..+ ++.++||||+++++++.+.+..++||||
T Consensus 52 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~ 131 (340)
T 3an0_A 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMEL 131 (340)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECC
T ss_pred heeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHH
Confidence 4556788999999999999874 78999999997643 3334556666665 7778999999999999999999999999
Q ss_pred cCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 273 MHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 273 ~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
+++ +|.+++.... ....+++..++.++.||+.||+|||+ . +|+||||||+||+++.++.+||+|||++......
T Consensus 132 ~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 132 MDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS---KLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207 (340)
T ss_dssp CSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHH---HTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred hhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh---cCCeecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence 975 9988876422 35679999999999999999999998 6 9999999999999999999999999999876442
Q ss_pred CcccccccccCCCCcCCCccC----CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 351 LTHISSVARGTVGYLDPEYYG----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 351 ~~~~~~~~~g~~~y~aPE~~~----~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
.. .....||+.|+|||++. ...++.++|||||||++|||+||+.||..... .............. ...
T Consensus 208 ~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~-~~~ 279 (340)
T 3an0_A 208 VA--KTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGT-----PFQQLKQVVEEPSP-QLP 279 (340)
T ss_dssp HH--HHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSC-----HHHHHHHHHHSCCC-CCC
T ss_pred cc--cccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccc-----hHHHHHHHhcCCCC-CCC
Confidence 21 22245899999999964 44789999999999999999999999973221 11122222222111 111
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. ......+.+++.+||+.||++|||+.|+++
T Consensus 280 ~--------~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 280 A--------DKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp G--------GGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred c--------ccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 0 112346889999999999999999999987
No 210
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=3.7e-41 Score=340.98 Aligned_cols=259 Identities=23% Similarity=0.276 Sum_probs=192.4
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCC------eeEEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QRILV 269 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~~lv 269 (517)
+|.+.+.||+|+||+||+|++..+..||+|++..... ...+|+++++.++||||+++++++...+ ..++|
T Consensus 41 ~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred eEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 4667899999999999999998777799998864322 1236999999999999999999985543 37899
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC-CCCcEEEccccCccccC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAE 348 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~a~~~~ 348 (517)
|||++++.+............+++..+..++.|++.||+|||+ .+|+||||||+|||++ .++.+||+|||+++...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH---CCccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 9999875444333222245679999999999999999999999 9999999999999999 79999999999998764
Q ss_pred CCCcccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc--------
Q 010131 349 EDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK-------- 419 (517)
Q Consensus 349 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-------- 419 (517)
.... .....+|+.|+|||++.+. .++.++||||+||++|||++|+.||.+.+..+ .+...+. .+..
T Consensus 194 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~--~l~~i~~-~~g~p~~~~~~~ 268 (394)
T 4e7w_A 194 AGEP--NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID--QLVEIIK-VLGTPSREQIKT 268 (394)
T ss_dssp TTCC--CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHH-HHCCCCHHHHHH
T ss_pred CCCC--CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHH-HhCCCCHHHHHh
Confidence 4332 2234579999999998664 58999999999999999999999997543221 1111111 1000
Q ss_pred --CCcccccCccccC-----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 420 --GDVISIVDPVLIG-----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 420 --~~~~~~~d~~l~~-----~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
.......-+.... .........+.+++.+||+.||++|||+.|+++.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 322 (394)
T 4e7w_A 269 MNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322 (394)
T ss_dssp HCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTS
T ss_pred hChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhcC
Confidence 0000000000000 0011133468899999999999999999999873
No 211
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=1.2e-40 Score=334.11 Aligned_cols=259 Identities=20% Similarity=0.284 Sum_probs=198.2
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecC-----CeeEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 268 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 268 (517)
+|.+.+.||+|+||.||+|... +++.||||++..... ...+.+.+|++++++++||||+++++++... ...++
T Consensus 28 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~i 107 (364)
T 3qyz_A 28 RYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107 (364)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEE
T ss_pred cEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEE
Confidence 4667889999999999999876 688999999975433 3347789999999999999999999998654 36899
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
||||++ |+|.+++.. ..+++..++.++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 108 v~e~~~-~~L~~~l~~----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~ 179 (364)
T 3qyz_A 108 VQDLME-TDLYKLLKT----QHLSNDHICYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179 (364)
T ss_dssp EEECCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEcccC-cCHHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChHhEEECCCCCEEEEeCcceEecC
Confidence 999996 599998863 469999999999999999999999 999999999999999999999999999998765
Q ss_pred CCCccc--ccccccCCCCcCCCccC-CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc--
Q 010131 349 EDLTHI--SSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI-- 423 (517)
Q Consensus 349 ~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 423 (517)
...... .....||+.|+|||++. +..++.++|||||||++|+|++|+.||......+ ....+..........
T Consensus 180 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~ 256 (364)
T 3qyz_A 180 PDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD---QLNHILGILGSPSQEDL 256 (364)
T ss_dssp GGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG---HHHHHHHHHCSCCHHHH
T ss_pred CCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH---HHHHHHHHhCCCCHHHH
Confidence 432221 23446899999999864 4558999999999999999999999997544322 111111111110000
Q ss_pred -------------cccCcccc--CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 424 -------------SIVDPVLI--GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 424 -------------~~~d~~l~--~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
....+... ..........+.+++.+||+.||++|||++|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 257 NCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00000000 0000112346789999999999999999999986
No 212
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.5e-41 Score=337.79 Aligned_cols=263 Identities=21% Similarity=0.238 Sum_probs=195.3
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeec------------
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------------ 262 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------ 262 (517)
.|.+.+.||+|+||+||+|... +|+.||||++..... ...+|+++++.++||||+++++++..
T Consensus 8 ~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~ 83 (383)
T 3eb0_A 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPP 83 (383)
T ss_dssp TEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----------
T ss_pred eEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccccccc
Confidence 4667899999999999999874 789999999865432 23479999999999999999999843
Q ss_pred --------------------------CCeeEEEEEecCCCCHHhHhhccC-CCCccCHHHHHHHHHHHHHHHHHHhcCCC
Q 010131 263 --------------------------EHQRILVYEYMHNGTLRDRLHGSV-NQKPLDWLTRLQIAHDAAKGLEYLHTGCN 315 (517)
Q Consensus 263 --------------------------~~~~~lv~e~~~~gsL~~~l~~~~-~~~~l~~~~~~~i~~~ia~aL~~LH~~~~ 315 (517)
....++||||++ |+|.+.+.... ....+++..+..++.|++.||+|||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~--- 159 (383)
T 3eb0_A 84 DDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHS--- 159 (383)
T ss_dssp --------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---
T ss_pred cccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH---
Confidence 334789999997 58777765422 45679999999999999999999999
Q ss_pred CCcEecCCCCCCeEeC-CCCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHh
Q 010131 316 PGIIHRDVKSSNILLD-INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELIS 393 (517)
Q Consensus 316 ~~ivH~dlk~~Nill~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~ellt 393 (517)
.+|+||||||+||+++ .++.+||+|||+++....... .....+|+.|+|||.+.+. .++.++||||+||++|||++
T Consensus 160 ~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 237 (383)
T 3eb0_A 160 LGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP--SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELIL 237 (383)
T ss_dssp TTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC--CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred CcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC--CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHh
Confidence 9999999999999997 689999999999987644332 2334579999999998764 58999999999999999999
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhc----------CCcccccCccccCC-----CCHHHHHHHHHHHHHhhccCCCCCC
Q 010131 394 GKKPVSVEDFGAELNIVHWARSMIKK----------GDVISIVDPVLIGN-----VKIESIWRIAEVAIQCVEQRGFSRP 458 (517)
Q Consensus 394 g~~p~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~~P~~RP 458 (517)
|+.||...+..+ .+...+ ..... .......-+..... .+......+.+++.+||+.||++||
T Consensus 238 g~~pf~~~~~~~--~~~~i~-~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 238 GKPLFSGETSID--QLVRII-QIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp SSCSSCCSSHHH--HHHHHH-HHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred CCCCCCCCChHH--HHHHHH-HHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 999997443221 111111 11100 00001000111000 1112334688999999999999999
Q ss_pred CHHHHHH--HHHhhh
Q 010131 459 KMQEIVL--AIQDSI 471 (517)
Q Consensus 459 s~~evl~--~L~~~~ 471 (517)
|+.|+++ .++++.
T Consensus 315 t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 315 NPYEAMAHPFFDHLR 329 (383)
T ss_dssp CHHHHHTSGGGHHHH
T ss_pred CHHHHhcCHHHHHHH
Confidence 9999985 355443
No 213
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=3e-40 Score=331.86 Aligned_cols=260 Identities=22% Similarity=0.279 Sum_probs=190.3
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCC------ee
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEH------QR 266 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------~~ 266 (517)
.|.+.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.+++.++||||+++++++...+ ..
T Consensus 26 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 105 (371)
T 2xrw_A 26 RYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDV 105 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEE
T ss_pred heeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccce
Confidence 4667789999999999999875 68999999997542 234567889999999999999999999987654 67
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||++ ++|.+.+. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 106 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 176 (371)
T 2xrw_A 106 YIVMELMD-ANLCQVIQ-----MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLART 176 (371)
T ss_dssp EEEEECCS-EEHHHHHH-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECCCCC---
T ss_pred EEEEEcCC-CCHHHHHh-----hccCHHHHHHHHHHHHHHHHHHHH---CCeecccCCHHHEEEcCCCCEEEEEeecccc
Confidence 99999997 57888875 348899999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccH----------------H
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNI----------------V 410 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~----------------~ 410 (517)
..... ......||+.|+|||++.+..++.++|||||||++|+|++|+.||...+....... .
T Consensus 177 ~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 254 (371)
T 2xrw_A 177 AGTSF--MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQ 254 (371)
T ss_dssp ---------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSC
T ss_pred ccccc--ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence 64432 12334689999999999999999999999999999999999999974432110000 0
Q ss_pred HHHHHHHhcCCc------ccccCccccCCC---CHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 411 HWARSMIKKGDV------ISIVDPVLIGNV---KIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 411 ~~~~~~~~~~~~------~~~~d~~l~~~~---~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
............ ............ .......+.+++.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 255 PTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 319 (371)
T ss_dssp HHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred hHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCcCChhhCCCHHHHhCC
Confidence 000000000000 000000000000 12235678999999999999999999999873
No 214
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.3e-41 Score=340.08 Aligned_cols=251 Identities=10% Similarity=0.035 Sum_probs=178.2
Q ss_pred HhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---hhHHHHHHHHHHHhcC--CCCCccccc-------eeeecC
Q 010131 197 NNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRI--HHRNLVPLI-------GYCEEE 263 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~h~niv~~~-------~~~~~~ 263 (517)
|.+.+.||+|+||.||+|.+. +|+.||||++..... ...+.+.+|+.+++.+ +||||++++ +++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 556789999999999999976 789999999986543 3345677885544444 699988755 344322
Q ss_pred -----------------CeeEEEEEecCCCCHHhHhhccCCCCccCHHHH------HHHHHHHHHHHHHHhcCCCCCcEe
Q 010131 264 -----------------HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTR------LQIAHDAAKGLEYLHTGCNPGIIH 320 (517)
Q Consensus 264 -----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~------~~i~~~ia~aL~~LH~~~~~~ivH 320 (517)
...++||||++ |+|.+++... ...+++..+ +.++.||+.||+|||+ ++|+|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~---~~ivH 217 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTL--DFVYVFRGDEGILALHILTAQLIRLAANLQS---KGLVH 217 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHH--HHSCCCCHHHHHHHHHHHHHHHHHHHHHHHH---TTEEE
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHh--ccccchhhhhhhhhHHHHHHHHHHHHHHHHH---CCCcc
Confidence 33799999998 8999999753 223344455 6788999999999999 99999
Q ss_pred cCCCCCCeEeCCCCcEEEccccCccccCCCCcccccccccCCCCcCCCccCC--CCCCccceehhHHHHHHHHHhCCCCC
Q 010131 321 RDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPV 398 (517)
Q Consensus 321 ~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~p~ 398 (517)
|||||+|||++.++.+||+|||+++...... ....+|+.|+|||++.+ ..++.++|||||||++|||+||+.||
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf 293 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPF 293 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCST
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999998765322 13346799999999987 68999999999999999999999999
Q ss_pred CCCCccccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 399 SVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.......... .........................+.+++.+||+.||++|||+.|+++
T Consensus 294 ~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 294 GLVTPGIKGS--------WKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TBCCTTCTTC--------CCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCcCcccccc--------hhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 7543221100 0000000000001100111123457889999999999999999999975
No 215
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.9e-40 Score=356.67 Aligned_cols=247 Identities=25% Similarity=0.330 Sum_probs=202.3
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCC---CchhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADS---CSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv 269 (517)
..|++.+.||+|+||.||+|+.. +++.||||+++.. .....+.+..|..++..+ +||+|+++++++.+.+..++|
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV 420 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFV 420 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEE
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEE
Confidence 34667889999999999999876 5889999999753 123446788899999988 799999999999999999999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|||+++|+|.+++.. ...+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||+++....
T Consensus 421 ~E~~~gg~L~~~l~~---~~~~~~~~~~~~~~qi~~aL~~LH~---~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~ 494 (674)
T 3pfq_A 421 MEYVNGGDLMYHIQQ---VGRFKEPHAVFYAAEIAIGLFFLQS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494 (674)
T ss_dssp EECCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TSEECCCCCSTTEEECSSSCEEECCCTTCEECCC
T ss_pred EeCcCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeccCChhhEEEcCCCcEEEeecceeecccc
Confidence 999999999999984 3579999999999999999999999 9999999999999999999999999999986433
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
... ......||+.|+|||++.+..++.++|||||||++|||++|+.||...+. .+...... .+..
T Consensus 495 ~~~-~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~------~~~~~~i~-~~~~------- 559 (674)
T 3pfq_A 495 DGV-TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE------DELFQSIM-EHNV------- 559 (674)
T ss_dssp TTC-CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHHHHH-SSCC-------
T ss_pred CCc-ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH------HHHHHHHH-hCCC-------
Confidence 222 23445699999999999999999999999999999999999999974332 12222222 2211
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCH-----HHHHH
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKM-----QEIVL 465 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~-----~evl~ 465 (517)
.++......+.+|+.+||+.||++||++ +||++
T Consensus 560 ---~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 560 ---AYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp ---CCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred ---CCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 0111223468899999999999999998 66654
No 216
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=2.8e-40 Score=336.13 Aligned_cols=263 Identities=20% Similarity=0.270 Sum_probs=181.5
Q ss_pred Hhh-hcccCCCCceEEEEEEec---CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeee--cCCeeEEEE
Q 010131 197 NNF-CKKIGKGSFGSVYYGKMK---DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE--EEHQRILVY 270 (517)
Q Consensus 197 ~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~--~~~~~~lv~ 270 (517)
|++ .++||+|+||+||+|++. +++.||||++.... ....+.+|+.++++++||||+++++++. .....++||
T Consensus 22 y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv~ 99 (405)
T 3rgf_A 22 FEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLF 99 (405)
T ss_dssp EECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEEE
T ss_pred hhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEEE
Confidence 444 468999999999999976 57899999997542 2346889999999999999999999994 467889999
Q ss_pred EecCCCCHHhHhhccC------CCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe----CCCCcEEEcc
Q 010131 271 EYMHNGTLRDRLHGSV------NQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL----DINMRAKVSD 340 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~------~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill----~~~~~~kl~D 340 (517)
||++ |+|.+++.... ....+++..++.++.||+.||+|||+ .+|+||||||+|||+ +.++.+||+|
T Consensus 100 e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 100 DYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp ECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred eCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHh---CCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 9996 58877775321 22359999999999999999999999 999999999999999 6789999999
Q ss_pred ccCccccCCCCc--ccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccc------cccHHH
Q 010131 341 FGLSRQAEEDLT--HISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGA------ELNIVH 411 (517)
Q Consensus 341 fg~a~~~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~------~~~~~~ 411 (517)
||+++....... .......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....... ......
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~ 255 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHH
Confidence 999987654321 12234568999999999877 458999999999999999999999997443210 011111
Q ss_pred HHHHHHhcCCcccccC---------------ccccCCCCH---------HHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 412 WARSMIKKGDVISIVD---------------PVLIGNVKI---------ESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 412 ~~~~~~~~~~~~~~~d---------------~~l~~~~~~---------~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.+...+.......+.+ ......... .....+.+|+.+||+.||++|||++|+++
T Consensus 256 ~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~ 333 (405)
T 3rgf_A 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ 333 (405)
T ss_dssp HHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 1111111000000000 000000000 00236789999999999999999999987
No 217
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=4e-40 Score=320.76 Aligned_cols=249 Identities=26% Similarity=0.322 Sum_probs=200.6
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---------hhHHHHHHHHHHHhcCC-CCCccccceeeecCC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---------HRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEH 264 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---------~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~ 264 (517)
.|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+++++++. ||||+++++++...+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (298)
T 1phk_A 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97 (298)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence 4556789999999999999886 689999999865421 22456889999999995 999999999999999
Q ss_pred eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCc
Q 010131 265 QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLS 344 (517)
Q Consensus 265 ~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a 344 (517)
..++||||+++++|.+++.. ...+++..++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++
T Consensus 98 ~~~lv~e~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 98 FFFLVFDLMKKGELFDYLTE---KVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp EEEEEEECCTTCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred eEEEEEeccCCCcHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEcCCCcEEEecccch
Confidence 99999999999999999974 4578999999999999999999999 99999999999999999999999999999
Q ss_pred cccCCCCcccccccccCCCCcCCCccC------CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHh
Q 010131 345 RQAEEDLTHISSVARGTVGYLDPEYYG------NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 418 (517)
Q Consensus 345 ~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 418 (517)
........ .....+++.|+|||.+. ...++.++||||||+++|+|++|+.||..... ..... .+.
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~~-~~~ 242 (298)
T 1phk_A 172 CQLDPGEK--LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQ------MLMLR-MIM 242 (298)
T ss_dssp EECCTTCC--BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHHH-HHH
T ss_pred hhcCCCcc--cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccH------HHHHH-HHh
Confidence 87654322 23345899999999874 45688999999999999999999999974321 11111 222
Q ss_pred cCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 419 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 419 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.+.... ..+ ........+.+++.+||+.||++|||+.|+++
T Consensus 243 ~~~~~~-~~~-----~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 243 SGNYQF-GSP-----EWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HTCCCC-CTT-----TGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred cCCccc-Ccc-----cccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 221110 000 01122346889999999999999999999975
No 218
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=1.1e-40 Score=334.07 Aligned_cols=255 Identities=21% Similarity=0.301 Sum_probs=180.9
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecC------Cee
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQR 266 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~ 266 (517)
.|.+.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|+.+++.++||||+++++++... ...
T Consensus 30 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~ 109 (367)
T 2fst_X 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDV 109 (367)
T ss_dssp TEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred ceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeE
Confidence 4667789999999999999865 68999999986542 23456788999999999999999999998654 567
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++|+|++ +++|.+++. ...+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 110 ~lv~e~~-~~~L~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~---~givH~Dlkp~NIll~~~~~~kL~DFG~a~~ 181 (367)
T 2fst_X 110 YLVTHLM-GADLNNIVK----CQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARH 181 (367)
T ss_dssp EEEEECC-CEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECC------
T ss_pred EEEeccc-CCCHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHhhEEECCCCCEEEeecccccc
Confidence 9999999 789998886 3579999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCcccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
.... .....||+.|+|||++.+ ..++.++||||+||++|||++|+.||.+.+... ....+...+.... .+.
T Consensus 182 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~---~l~~i~~~~g~p~-~~~ 253 (367)
T 2fst_X 182 TADE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID---QLKLILRLVGTPG-AEL 253 (367)
T ss_dssp -------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCSCC-HHH
T ss_pred cccc----CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCC-HHH
Confidence 5432 223468999999999876 688999999999999999999999997543211 1111111111000 000
Q ss_pred cCc-----------ccc--CCCC-----HHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 426 VDP-----------VLI--GNVK-----IESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 426 ~d~-----------~l~--~~~~-----~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
+.. .+. .... ......+.+|+.+||+.||++|||+.|+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~h 312 (367)
T 2fst_X 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 312 (367)
T ss_dssp HTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred HHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcC
Confidence 000 000 0000 0112457899999999999999999999863
No 219
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=2.4e-40 Score=329.71 Aligned_cols=257 Identities=22% Similarity=0.306 Sum_probs=202.0
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCch-----------------hHHHHHHHHHHHhcCCCCCccccce
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH-----------------RTQQFVTEVALLSRIHHRNLVPLIG 258 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------------~~~~~~~E~~~l~~l~h~niv~~~~ 258 (517)
.|.+.+.||+|+||.||+|.. +|+.||||++...... ..+.+.+|+.++++++||||+++++
T Consensus 32 ~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~ 110 (348)
T 2pml_X 32 DYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEG 110 (348)
T ss_dssp TEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSE
T ss_pred ceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEE
Confidence 566788999999999999999 7999999998643211 1178999999999999999999999
Q ss_pred eeecCCeeEEEEEecCCCCHHhH------hhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC
Q 010131 259 YCEEEHQRILVYEYMHNGTLRDR------LHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI 332 (517)
Q Consensus 259 ~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~ 332 (517)
++.+.+..++||||+++|+|.++ +... ....+++..++.++.|++.||.|||+ ..+++||||||+||+++.
T Consensus 111 ~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 111 IITNYDEVYIIYEYMENDSILKFDEYFFVLDKN-YTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDK 187 (348)
T ss_dssp EEESSSEEEEEEECCTTCBSSEESSSEESSCSS-SCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECT
T ss_pred EEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc-cccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcC
Confidence 99999999999999999999998 5422 25779999999999999999999996 379999999999999999
Q ss_pred CCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCC-CCCc-cceehhHHHHHHHHHhCCCCCCCCCccccccHH
Q 010131 333 NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTE-KSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 410 (517)
Q Consensus 333 ~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~-~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~ 410 (517)
++.+||+|||.+...... ......|++.|+|||.+.+. .++. ++||||||+++|||++|+.||...... .
T Consensus 188 ~~~~kl~dfg~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~--- 259 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDK---KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISL--V--- 259 (348)
T ss_dssp TSCEEECCCTTCEECBTT---EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCS--H---
T ss_pred CCcEEEeccccccccccc---cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcH--H---
Confidence 999999999999876443 22345589999999999877 6666 999999999999999999999743321 1
Q ss_pred HHHHHHHhcCCcccccC------cccc---CCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 411 HWARSMIKKGDVISIVD------PVLI---GNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 411 ~~~~~~~~~~~~~~~~d------~~l~---~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
+ ....+..+......+ +... ..........+.+++.+||+.||++|||+.|+++
T Consensus 260 ~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 260 E-LFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp H-HHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred H-HHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 1 112222221111000 0000 0001223446889999999999999999999987
No 220
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.1e-40 Score=327.06 Aligned_cols=249 Identities=24% Similarity=0.399 Sum_probs=192.9
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcC-CCCCccccceeeec------CCeeE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEE------EHQRI 267 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~------~~~~~ 267 (517)
.|++.+.||+|+||.||+|.+. +|+.||||++.... ...+.+.+|+.+++++ +||||+++++++.. .+..+
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~ 103 (326)
T 2x7f_A 25 IFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLW 103 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEE
T ss_pred cEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEE
Confidence 3556789999999999999885 68999999987543 3456788999999999 79999999999876 46789
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
+||||+++|+|.+++.... ...+++..++.++.|++.||.|||+ .+++|+||||+||+++.++.+||+|||++...
T Consensus 104 lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~ 179 (326)
T 2x7f_A 104 LVMEFCGAGSVTDLIKNTK-GNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179 (326)
T ss_dssp EEEECCTTEEHHHHHHHSG-GGCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEECTTCCEEECCCTTTC--
T ss_pred EEEEcCCCCcHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCcHHHEEEcCCCCEEEeeCcCceec
Confidence 9999999999999997542 3578999999999999999999999 99999999999999999999999999999876
Q ss_pred CCCCcccccccccCCCCcCCCccC-----CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 348 EEDLTHISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 348 ~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
..... ......|++.|+|||.+. +..++.++|||||||++|+|++|+.||..... ...... +.....
T Consensus 180 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~------~~~~~~-~~~~~~ 251 (326)
T 2x7f_A 180 DRTVG-RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP------MRALFL-IPRNPA 251 (326)
T ss_dssp ------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCH------HHHHHH-HHHSCC
T ss_pred CcCcc-ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcH------HHHHHH-hhcCcc
Confidence 43322 122345899999999986 56788999999999999999999999963321 111111 111111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
...... .....+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~--------~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 252 PRLKSK--------KWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp CCCSCS--------CSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCCcc--------ccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 111111 11246889999999999999999999987
No 221
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=8.5e-41 Score=328.81 Aligned_cols=257 Identities=24% Similarity=0.367 Sum_probs=197.4
Q ss_pred HHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
..|.+.+.||+|+||.||+|.+.. .||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~ 110 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSL 110 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBC
T ss_pred HHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeec
Confidence 345678899999999999998863 49999986432 22335678899999999999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC-
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL- 351 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~- 351 (517)
+++++|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++ ++.+||+|||++.......
T Consensus 111 ~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~ 184 (319)
T 2y4i_B 111 CKGRTLYSVVRDA--KIVLDVNKTRQIAQEIVKGMGYLHA---KGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQA 184 (319)
T ss_dssp CCSEEHHHHTTSS--CCCCCSHHHHHHHHHHHHHHHHHHH---TTCCCCCCCSTTEEEC---CCEECCCSCCC-------
T ss_pred ccCCcHHHHHHhc--CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChhhEEEe-CCCEEEeecCCccccccccc
Confidence 9999999999742 3468999999999999999999999 9999999999999998 6799999999987643211
Q ss_pred ---cccccccccCCCCcCCCccCC---------CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc
Q 010131 352 ---THISSVARGTVGYLDPEYYGN---------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK 419 (517)
Q Consensus 352 ---~~~~~~~~g~~~y~aPE~~~~---------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 419 (517)
........|++.|+|||.+.+ ..++.++||||||+++|||++|+.||...... ... ..+..
T Consensus 185 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~------~~~-~~~~~ 257 (319)
T 2y4i_B 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE------AII-WQMGT 257 (319)
T ss_dssp ---CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHH------HHH-HHHHT
T ss_pred cccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH------HHH-HHhcc
Confidence 111223458899999999864 45788999999999999999999999733221 111 12222
Q ss_pred CCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhh
Q 010131 420 GDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIE 474 (517)
Q Consensus 420 ~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~ 474 (517)
+......... ....+.+++.+||+.||++|||++++++.|+++....
T Consensus 258 ~~~~~~~~~~--------~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 258 GMKPNLSQIG--------MGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp TCCCCCCCSS--------CCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCCCcCC--------CCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 2221111111 1225789999999999999999999999999887654
No 222
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=3.4e-40 Score=337.44 Aligned_cols=198 Identities=26% Similarity=0.328 Sum_probs=171.3
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcC------CCCCccccceeeecCCeeE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRI------HHRNLVPLIGYCEEEHQRI 267 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~h~niv~~~~~~~~~~~~~ 267 (517)
.+|++.+.||+|+||+||+|... +++.||||++... ....+.+.+|+.+++.+ +|+||+++++++...+..+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 35777899999999999999876 5899999999753 33446778888888877 5779999999999999999
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc--EEEccccCcc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR--AKVSDFGLSR 345 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~a~ 345 (517)
+||||+. ++|.+++... ....+++..+..++.||+.||+|||+ .+|+||||||+|||++.++. +||+|||++.
T Consensus 176 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 176 MTFELLS-MNLYELIKKN-KFQGFSLPLVRKFAHSILQCLDALHK---NRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEECCCC-CBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---HTEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEeccC-CCHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 9999995 6999988754 23459999999999999999999999 99999999999999999887 9999999997
Q ss_pred ccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCC
Q 010131 346 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 402 (517)
Q Consensus 346 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~ 402 (517)
..... .....||+.|+|||++.+..++.++|||||||++|||+||+.||...+
T Consensus 251 ~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~ 303 (429)
T 3kvw_A 251 YEHQR----VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGED 303 (429)
T ss_dssp ETTCC----CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred ecCCc----ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCC
Confidence 65432 223468999999999999999999999999999999999999997543
No 223
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=1.4e-40 Score=333.36 Aligned_cols=259 Identities=22% Similarity=0.275 Sum_probs=190.4
Q ss_pred HHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCch-----------hHHHHHHHHHHHhcCCCCCccccceeeec--
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH-----------RTQQFVTEVALLSRIHHRNLVPLIGYCEE-- 262 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~h~niv~~~~~~~~-- 262 (517)
.|.+.+.||+|+||.||+|...+|+.||||++...... ..+.+.+|++++++++||||+++++++..
T Consensus 23 ~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 102 (362)
T 3pg1_A 23 PYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102 (362)
T ss_dssp SCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECC
T ss_pred ceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEecc
Confidence 45567899999999999999888999999998643221 23779999999999999999999999843
Q ss_pred ---CCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEc
Q 010131 263 ---EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVS 339 (517)
Q Consensus 263 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~ 339 (517)
....++||||++ |+|.+++.. ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+
T Consensus 103 ~~~~~~~~lv~e~~~-~~l~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~ 176 (362)
T 3pg1_A 103 EPAMHKLYLVTELMR-TDLAQVIHD--QRIVISPQHIQYFMYHILLGLHVLHE---AGVVHRDLHPGNILLADNNDITIC 176 (362)
T ss_dssp TTTCCEEEEEEECCS-EEHHHHHHC--TTSCCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcceEEEEEccCC-CCHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHH---CcCEecCCChHHEEEcCCCCEEEE
Confidence 346799999997 688888874 34579999999999999999999999 999999999999999999999999
Q ss_pred cccCccccCCCCcccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHh
Q 010131 340 DFGLSRQAEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 418 (517)
Q Consensus 340 Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 418 (517)
|||++........ .....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||....... ....+.....
T Consensus 177 Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~ 251 (362)
T 3pg1_A 177 DFNLAREDTADAN--KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN---QLNKIVEVVG 251 (362)
T ss_dssp CTTC-----------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHC
T ss_pred ecCcccccccccc--cceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHcC
Confidence 9999976443322 233457899999999876 678999999999999999999999997443211 1111111111
Q ss_pred cCCcc-----------cccCcccc---C----CCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 419 KGDVI-----------SIVDPVLI---G----NVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 419 ~~~~~-----------~~~d~~l~---~----~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
..... +.+..... . .........+.+++.+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 252 TPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 10000 00000000 0 001112346889999999999999999999986
No 224
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=5.5e-40 Score=320.25 Aligned_cols=250 Identities=24% Similarity=0.392 Sum_probs=191.9
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeec-----------
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----------- 262 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----------- 262 (517)
..|++.+.||+|+||.||+|+.. +++.||||++... ....+.+.+|+.++++++||||+++++++.+
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (303)
T 1zy4_A 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAV 84 (303)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC-----
T ss_pred ccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhccc
Confidence 45667899999999999999875 7899999998643 3445778999999999999999999998754
Q ss_pred --CCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEcc
Q 010131 263 --EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 340 (517)
Q Consensus 263 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 340 (517)
.+..++||||+++|+|.+++... ...+++..++.++.|++.||+|||+ .+++||||||+||+++.++.+||+|
T Consensus 85 ~~~~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 85 KKKSTLFIQMEYCENGTLYDLIHSE--NLNQQRDEYWRLFRQILEALSYIHS---QGIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp -CEEEEEEEEECCCSCBHHHHHHHS--CGGGCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccCCceEEEEecCCCCCHHHhhhcc--ccccchHHHHHHHHHHHHHHHHHHh---CCeecccCCHHhEEEcCCCCEEEee
Confidence 45679999999999999999752 4568889999999999999999999 9999999999999999999999999
Q ss_pred ccCccccCCCC-------------cccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCCCCcccc
Q 010131 341 FGLSRQAEEDL-------------THISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 406 (517)
Q Consensus 341 fg~a~~~~~~~-------------~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~ 406 (517)
||++....... ........|++.|+|||.+.+. .++.++|||||||++|+|++ ||...
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~----- 231 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTG----- 231 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSH-----
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCc-----
Confidence 99998764321 1112234588999999998764 78999999999999999998 55411
Q ss_pred ccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 407 LNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 407 ~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
....+.. ..+.... ..+........+..+.+++.+||+.||.+|||+.|+++
T Consensus 232 ~~~~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 232 MERVNIL-KKLRSVS------IEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHHHHH-HHHHSTT------CCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhHHHHH-Hhccccc------cccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 1111111 1122111 11111222333456789999999999999999999986
No 225
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=8.9e-41 Score=331.23 Aligned_cols=259 Identities=22% Similarity=0.292 Sum_probs=201.9
Q ss_pred HHHHhhhcccCCCCceEEEEEEe-c-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCC------CccccceeeecCCe
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKM-K-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR------NLVPLIGYCEEEHQ 265 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~------niv~~~~~~~~~~~ 265 (517)
...|++.+.||+|+||.||+|.. . +++.||||++... ....+.+.+|+++++.++|+ +++++++++.+.+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 34677889999999999999987 3 6889999999753 34456788999999988655 49999999999999
Q ss_pred eEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC-------------
Q 010131 266 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI------------- 332 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~------------- 332 (517)
.++||||+ +++|.+++... ....+++..+..++.|++.||+|||+ ++|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~ 166 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKEN-GFLPFRLDHIRKMAYQICKSVNFLHS---NKLTHTDLKPENILFVQSDYTEAYNPKIKR 166 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCCGGGEEESCCCEEEEEC----C
T ss_pred EEEEEcCC-CCCHHHHHHhc-CCCCCcHHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeccccccccCCcccc
Confidence 99999999 89999998754 23468999999999999999999999 99999999999999987
Q ss_pred ------CCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCcccc
Q 010131 333 ------NMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAE 406 (517)
Q Consensus 333 ------~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~ 406 (517)
++.+||+|||++...... .....||+.|+|||++.+..++.++|||||||++|||++|+.||...+..+.
T Consensus 167 ~~~~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~ 242 (339)
T 1z57_A 167 DERTLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEH 242 (339)
T ss_dssp EEEEESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHH
T ss_pred ccccccCCCceEeeCcccccCccc----cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHH
Confidence 668999999999875432 2234589999999999999999999999999999999999999974432211
Q ss_pred ccHHHHHHHHHhc--------CCccccc---------------------Ccc-ccCCCCHHHHHHHHHHHHHhhccCCCC
Q 010131 407 LNIVHWARSMIKK--------GDVISIV---------------------DPV-LIGNVKIESIWRIAEVAIQCVEQRGFS 456 (517)
Q Consensus 407 ~~~~~~~~~~~~~--------~~~~~~~---------------------d~~-l~~~~~~~~~~~l~~li~~cl~~~P~~ 456 (517)
...+...... ....... .+. -...........+.+++.+||+.||++
T Consensus 243 ---~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~ 319 (339)
T 1z57_A 243 ---LAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAK 319 (339)
T ss_dssp ---HHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTT
T ss_pred ---HHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCccc
Confidence 1111111110 0000000 000 000112345678899999999999999
Q ss_pred CCCHHHHHH
Q 010131 457 RPKMQEIVL 465 (517)
Q Consensus 457 RPs~~evl~ 465 (517)
|||++|+++
T Consensus 320 Rpt~~ell~ 328 (339)
T 1z57_A 320 RITLREALK 328 (339)
T ss_dssp SCCHHHHTT
T ss_pred ccCHHHHhc
Confidence 999999975
No 226
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=1.9e-40 Score=338.50 Aligned_cols=258 Identities=24% Similarity=0.268 Sum_probs=191.7
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecC------CeeEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEE------HQRIL 268 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------~~~~l 268 (517)
.|.+.+.||+|+||.||+|++. +|+.||||++..... .+.+|++++++++||||++++++|... ...++
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~l 130 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNL 130 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEe
Confidence 3566789999999999999986 589999999865422 234799999999999999999988532 23679
Q ss_pred EEEecCCCCHHhHhhcc-CCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC-CcEEEccccCccc
Q 010131 269 VYEYMHNGTLRDRLHGS-VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-MRAKVSDFGLSRQ 346 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~-~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~-~~~kl~Dfg~a~~ 346 (517)
||||+++ ++.+.+... .....+++..+..++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+|||+++.
T Consensus 131 v~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 131 VLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS---FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred ehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 9999975 666555422 245679999999999999999999999 999999999999999965 6689999999987
Q ss_pred cCCCCcccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHH-------HHh
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARS-------MIK 418 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~-------~~~ 418 (517)
...... .....||+.|+|||++.+. .++.++|||||||++|||++|+.||...+..+ .+.+.+.. .+.
T Consensus 207 ~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~--~l~~i~~~lg~p~~~~~~ 282 (420)
T 1j1b_A 207 LVRGEP--NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD--QLVEIIKVLGTPTREQIR 282 (420)
T ss_dssp CCTTCC--CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHHHHHHHCSCCHHHHH
T ss_pred cccCCC--ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHhCCCCHHHHH
Confidence 644322 2334589999999998764 78999999999999999999999997443211 11111110 000
Q ss_pred --cCCcccccCccccCC-----CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 419 --KGDVISIVDPVLIGN-----VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 419 --~~~~~~~~d~~l~~~-----~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.....+...+.+... +.......+.+|+.+||+.||++|||+.|+++
T Consensus 283 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 283 EMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 011111111111110 11122356889999999999999999999986
No 227
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=9.8e-40 Score=316.38 Aligned_cols=253 Identities=26% Similarity=0.355 Sum_probs=203.3
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeeecCCeeE
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRI 267 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 267 (517)
......|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 18 ~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (287)
T 2wei_A 18 GTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFY 97 (287)
T ss_dssp HHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEE
T ss_pred HHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEE
Confidence 444567888999999999999999886 68999999986532 235678999999999999999999999999999999
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC---CcEEEccccCc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN---MRAKVSDFGLS 344 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~---~~~kl~Dfg~a 344 (517)
+|+||+++++|.+++.. ...+++..++.++.|++.||.|||+ .+++||||||+||+++.+ +.+||+|||++
T Consensus 98 lv~e~~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~~l~~LH~---~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~ 171 (287)
T 2wei_A 98 IVGELYTGGELFDEIIK---RKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDIKIIDFGLS 171 (287)
T ss_dssp EEECCCCSCBHHHHHHH---HSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEESCSSTTCCEEECSTTGG
T ss_pred EEEEccCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChhhEEEecCCCcccEEEeccCcc
Confidence 99999999999998874 3568999999999999999999999 999999999999999764 46999999999
Q ss_pred cccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 345 RQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 345 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
........ .....+++.|+|||.+.+ .++.++||||||+++|+|++|+.||..... .+.. ..+..+....
T Consensus 172 ~~~~~~~~--~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~~~~~------~~~~-~~~~~~~~~~ 241 (287)
T 2wei_A 172 TCFQQNTK--MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFYGKNE------YDIL-KRVETGKYAF 241 (287)
T ss_dssp GTBCCCSS--CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSCCSSH------HHHH-HHHHHCCCCC
T ss_pred eeecCCCc--cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCCCCCH------HHHH-HHHHcCCCCC
Confidence 87654322 122347889999999876 489999999999999999999999974321 1111 2222222111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.. +. .. .....+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~-~~-~~----~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 242 DL-PQ-WR----TISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CS-GG-GT----TSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred Cc-hh-hh----hcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 00 00 01 12246889999999999999999999987
No 228
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.5e-40 Score=321.71 Aligned_cols=250 Identities=23% Similarity=0.334 Sum_probs=194.5
Q ss_pred HHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--chhHHHHHHHHHHHhcCC--CCCccccceeeecCCeeEEEE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~~~lv~ 270 (517)
..|.+.+.||+|+||.||+|...+++.||||++.... ....+.+.+|++++.+++ ||||+++++++.+.+..++||
T Consensus 28 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 107 (313)
T 3cek_A 28 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 107 (313)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEE
T ss_pred ceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEE
Confidence 3466788999999999999999889999999986542 334577899999999996 599999999999999999999
Q ss_pred EecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCC
Q 010131 271 EYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 271 e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~ 350 (517)
| +.+++|.+++.. ...+++..++.++.|++.||.|||+ .+|+||||||+||+++ ++.+||+|||++......
T Consensus 108 e-~~~~~L~~~l~~---~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~ 179 (313)
T 3cek_A 108 E-CGNIDLNSWLKK---KKSIDPWERKSYWKNMLEAVHTIHQ---HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 179 (313)
T ss_dssp C-CCSEEHHHHHHH---CSSCCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC----
T ss_pred e-cCCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEEE-CCeEEEeeccccccccCc
Confidence 9 668899999984 4578999999999999999999999 9999999999999996 489999999999876543
Q ss_pred Ccc-cccccccCCCCcCCCccCC-----------CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHh
Q 010131 351 LTH-ISSVARGTVGYLDPEYYGN-----------QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 418 (517)
Q Consensus 351 ~~~-~~~~~~g~~~y~aPE~~~~-----------~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 418 (517)
... ......|++.|+|||.+.+ ..++.++||||||+++|+|++|+.||..... ..........
T Consensus 180 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~-----~~~~~~~~~~ 254 (313)
T 3cek_A 180 TTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIIN-----QISKLHAIID 254 (313)
T ss_dssp ----------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHC
T ss_pred cccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHH-----HHHHHHHHHh
Confidence 221 1233458999999999865 4788899999999999999999999963221 1112222222
Q ss_pred cCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 419 KGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 419 ~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
...... .+......+.+++.+||+.||++|||++|+++.
T Consensus 255 ~~~~~~---------~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 255 PNHEIE---------FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp TTSCCC---------CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred cccccC---------CcccchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 111111 111112468899999999999999999999863
No 229
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=8.2e-40 Score=321.69 Aligned_cols=256 Identities=21% Similarity=0.278 Sum_probs=190.7
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeee-------------
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCE------------- 261 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~------------- 261 (517)
.|.+.+.||+|+||.||+|... +++.||+|++........+.+.+|++++++++||||+++++++.
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 91 (320)
T 2i6l_A 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91 (320)
T ss_dssp TEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----C
T ss_pred ceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccc
Confidence 4566789999999999999887 48999999998665566778999999999999999999998873
Q ss_pred -cCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC-CCCcEEEc
Q 010131 262 -EEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVS 339 (517)
Q Consensus 262 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~ 339 (517)
+....++||||++ |+|.+++. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++ .++.+||+
T Consensus 92 ~~~~~~~lv~e~~~-~~L~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~kl~ 163 (320)
T 2i6l_A 92 TELNSVYIVQEYME-TDLANVLE----QGPLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIG 163 (320)
T ss_dssp CSCSEEEEEEECCS-EEHHHHHT----TCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCCCCSGGGEEEETTTTEEEEC
T ss_pred cccCceeEEeeccC-CCHHHHhh----cCCccHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCeEEEc
Confidence 3467899999997 69999986 4568999999999999999999999 9999999999999997 56799999
Q ss_pred cccCccccCCCCcc--cccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 010131 340 DFGLSRQAEEDLTH--ISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 416 (517)
Q Consensus 340 Dfg~a~~~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 416 (517)
|||++......... ......++..|+|||.+.+ ..++.++||||||+++|||++|+.||....... .....
T Consensus 164 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~------~~~~~ 237 (320)
T 2i6l_A 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE------QMQLI 237 (320)
T ss_dssp CCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH------HHHHH
T ss_pred cCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH------HHHHH
Confidence 99999876432211 1223447889999998755 678999999999999999999999997443211 11111
Q ss_pred HhcCCc-------------ccccCcccc-CCC-----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 417 IKKGDV-------------ISIVDPVLI-GNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 417 ~~~~~~-------------~~~~d~~l~-~~~-----~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
...... ...+..... ... .......+.+++.+||+.||++|||++|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 238 LESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 111000 000000000 000 0112346889999999999999999999986
No 230
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=8.3e-40 Score=328.99 Aligned_cols=270 Identities=20% Similarity=0.306 Sum_probs=203.2
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-----------CCCccccceeee
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-----------HRNLVPLIGYCE 261 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------h~niv~~~~~~~ 261 (517)
...|.+.+.||+|+||+||+|... +++.||||++... ....+.+.+|+.++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 346777899999999999999874 6899999999743 334567889999999886 899999999987
Q ss_pred cCC----eeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CcEecCCCCCCeEeC-----
Q 010131 262 EEH----QRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLD----- 331 (517)
Q Consensus 262 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~-~ivH~dlk~~Nill~----- 331 (517)
..+ ..++||||+ +++|.+++.... ...+++..++.++.||+.||+|||+ + +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~-~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYE-HRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTT-TSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhh-ccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCC
Confidence 654 789999999 899999997542 4569999999999999999999999 8 999999999999994
Q ss_pred -CCCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHH
Q 010131 332 -INMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIV 410 (517)
Q Consensus 332 -~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~ 410 (517)
..+.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||+||+.||............
T Consensus 172 ~~~~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~ 247 (373)
T 1q8y_A 172 ENLIQIKIADLGNACWYDEHY----TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDD 247 (373)
T ss_dssp TTEEEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHH
T ss_pred cCcceEEEcccccccccCCCC----CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChH
Confidence 44589999999998765432 2345899999999999999999999999999999999999999754322111111
Q ss_pred HHHHHHHh-cCCccc--------------------ccCc-c---------ccCCCCHHHHHHHHHHHHHhhccCCCCCCC
Q 010131 411 HWARSMIK-KGDVIS--------------------IVDP-V---------LIGNVKIESIWRIAEVAIQCVEQRGFSRPK 459 (517)
Q Consensus 411 ~~~~~~~~-~~~~~~--------------------~~d~-~---------l~~~~~~~~~~~l~~li~~cl~~~P~~RPs 459 (517)
........ .+.... .+.. . -....+......+.+++.+||+.||++|||
T Consensus 248 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 327 (373)
T 1q8y_A 248 DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRAD 327 (373)
T ss_dssp HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBC
T ss_pred HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCC
Confidence 11111110 010000 0000 0 011234567778999999999999999999
Q ss_pred HHHHHH--HHHhhhhh
Q 010131 460 MQEIVL--AIQDSIKI 473 (517)
Q Consensus 460 ~~evl~--~L~~~~~~ 473 (517)
++|+++ .+++....
T Consensus 328 ~~ell~hp~f~~~~~~ 343 (373)
T 1q8y_A 328 AGGLVNHPWLKDTLGM 343 (373)
T ss_dssp HHHHHTCGGGTTCTTC
T ss_pred HHHHhhChhhhcccCc
Confidence 999987 35544433
No 231
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=1.1e-39 Score=327.75 Aligned_cols=254 Identities=21% Similarity=0.296 Sum_probs=192.9
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeecCCee------
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQR------ 266 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~------ 266 (517)
+|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.+++.++||||+++++++...+..
T Consensus 43 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 122 (371)
T 4exu_A 43 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 122 (371)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCC
T ss_pred cEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeE
Confidence 5566789999999999999876 689999999976432 3356788999999999999999999999877654
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||+. ++|.+++. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 123 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~ 193 (371)
T 4exu_A 123 YLVMPFMQ-TDLQKIMG-----MEFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 193 (371)
T ss_dssp EEEEECCC-EEHHHHTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEECTTCCEEECSTTCC--
T ss_pred EEEEcccc-ccHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHH---CCCcCCCcCHHHeEECCCCCEEEEecCcccc
Confidence 99999996 68888774 348999999999999999999999 9999999999999999999999999999986
Q ss_pred cCCCCcccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
.... .....||+.|+|||++.+ ..++.++|||||||++|+|++|+.||...+..+ ....+...... ...+.
T Consensus 194 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~-~~~~~ 265 (371)
T 4exu_A 194 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGV-PGTEF 265 (371)
T ss_dssp ----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHCC-CCHHH
T ss_pred cccC----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH---HHHHHHHHhCC-CcHHH
Confidence 5433 223457999999999877 788999999999999999999999997443211 11111110000 00000
Q ss_pred c---------------CccccCC---CCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHH
Q 010131 426 V---------------DPVLIGN---VKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLA 466 (517)
Q Consensus 426 ~---------------d~~l~~~---~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~ 466 (517)
. ....... ........+.+++.+||+.||++|||++|+++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 324 (371)
T 4exu_A 266 VQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324 (371)
T ss_dssp HTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred HHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhcC
Confidence 0 0000000 001123468899999999999999999999863
No 232
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=3.4e-40 Score=325.52 Aligned_cols=260 Identities=21% Similarity=0.283 Sum_probs=196.8
Q ss_pred HHhhhcccCCCCceEEEEEEe--cCCcEEEEEEecCCCc--hhHHHHHHHHHHHhcC---CCCCccccceeee-----cC
Q 010131 196 TNNFCKKIGKGSFGSVYYGKM--KDGKEVAVKIMADSCS--HRTQQFVTEVALLSRI---HHRNLVPLIGYCE-----EE 263 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~h~niv~~~~~~~-----~~ 263 (517)
.|.+.+.||+|+||.||+|.. .+|+.||+|++..... .....+.+|+.+++.+ +||||+++++++. ..
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~ 91 (326)
T 1blx_A 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 91 (326)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSE
T ss_pred ceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCC
Confidence 456788999999999999987 3688999999864322 1223566777777766 8999999999987 55
Q ss_pred CeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccC
Q 010131 264 HQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGL 343 (517)
Q Consensus 264 ~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~ 343 (517)
...++||||++ |+|.+++... ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+
T Consensus 92 ~~~~lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~---~gi~H~dlkp~Nili~~~~~~kl~Dfg~ 166 (326)
T 1blx_A 92 TKLTLVFEHVD-QDLTTYLDKV-PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADFGL 166 (326)
T ss_dssp EEEEEEEECCS-CBHHHHHHHS-CTTCSCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCCGGGEEECTTCCEEECSCCS
T ss_pred ceEEEEEecCC-CCHHHHHHhc-ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHHHeEEcCCCCEEEecCcc
Confidence 67899999997 6999998754 24458999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcc
Q 010131 344 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVI 423 (517)
Q Consensus 344 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (517)
+....... ......|++.|+|||.+.+..++.++||||||+++|+|++|+.||...... .....+..........
T Consensus 167 ~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~~~ 241 (326)
T 1blx_A 167 ARIYSFQM--ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV---DQLGKILDVIGLPGEE 241 (326)
T ss_dssp CCCCCGGG--GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH---HHHHHHHHHHCCCCGG
T ss_pred cccccCCC--CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHH---HHHHHHHHHcCCCCcc
Confidence 98765332 223455899999999999999999999999999999999999999743321 1111111111110000
Q ss_pred ccc------Cccc-------cCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 424 SIV------DPVL-------IGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 424 ~~~------d~~l-------~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.+. .... ...........+.+++.+||+.||++|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 242 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp GSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 000 0000 00011123346789999999999999999999985
No 233
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=9.2e-41 Score=334.35 Aligned_cols=262 Identities=19% Similarity=0.239 Sum_probs=185.0
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeecCCe-------
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------- 265 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------- 265 (517)
...|.+.+.||+|+||.||+|... +|+.||||++.... .....+.+|++.++.++||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 100 (360)
T 3e3p_A 22 MDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIY 100 (360)
T ss_dssp HTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEE
T ss_pred ccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhcccccccccee
Confidence 345667899999999999999886 68999999986542 223456778888899999999999999865433
Q ss_pred eEEEEEecCCCCHHhHhhc-cCCCCccCHHHHHHHHHHHHHHHHHHh--cCCCCCcEecCCCCCCeEeCC-CCcEEEccc
Q 010131 266 RILVYEYMHNGTLRDRLHG-SVNQKPLDWLTRLQIAHDAAKGLEYLH--TGCNPGIIHRDVKSSNILLDI-NMRAKVSDF 341 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~-~~~~~~l~~~~~~~i~~~ia~aL~~LH--~~~~~~ivH~dlk~~Nill~~-~~~~kl~Df 341 (517)
.++||||+++ +|.+.+.. ......+++..+..++.|++.||.||| + .+|+||||||+|||++. ++.+||+||
T Consensus 101 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---~~ivH~Dlkp~NIll~~~~~~~kl~Df 176 (360)
T 3e3p_A 101 LNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPS---VNVCHRDIKPHNVLVNEADGTLKLCDF 176 (360)
T ss_dssp EEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTT---TCCBCSCCCGGGEEEETTTTEEEECCC
T ss_pred EEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCC---CCeecCcCCHHHEEEeCCCCcEEEeeC
Confidence 7899999976 44444332 224667899999999999999999999 7 99999999999999997 899999999
Q ss_pred cCccccCCCCcccccccccCCCCcCCCccCCC-CCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhc-
Q 010131 342 GLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ-QLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKK- 419 (517)
Q Consensus 342 g~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~- 419 (517)
|++........ .....||+.|+|||++.+. .++.++|||||||++|+|++|+.||...+... .+.. +......
T Consensus 177 g~a~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~--~~~~-~~~~~~~~ 251 (360)
T 3e3p_A 177 GSAKKLSPSEP--NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAG--QLHE-IVRVLGCP 251 (360)
T ss_dssp TTCBCCCTTSC--CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH--HHHH-HHHHHCCC
T ss_pred CCceecCCCCC--cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHH--HHHH-HHHHcCCC
Confidence 99987654332 2334579999999998654 48999999999999999999999997443221 1111 1111100
Q ss_pred -----------CCcccccCc------cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 420 -----------GDVISIVDP------VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 420 -----------~~~~~~~d~------~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.......+. .............+.+++.+||+.||.+|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp CHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000 0001111224567899999999999999999999986
No 234
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=1.4e-39 Score=328.47 Aligned_cols=200 Identities=28% Similarity=0.314 Sum_probs=169.6
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-CC-----CccccceeeecCCeeE
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HR-----NLVPLIGYCEEEHQRI 267 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~-----niv~~~~~~~~~~~~~ 267 (517)
..|.+.+.||+|+||+||+|... +++.||||++... ......+..|+.+++.++ |+ +|+++++++...+..+
T Consensus 54 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 132 (382)
T 2vx3_A 54 DRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLC 132 (382)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEE
T ss_pred eeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceE
Confidence 45677899999999999999876 6889999999743 334567788999988884 55 4999999999999999
Q ss_pred EEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC--CCCcEEEccccCcc
Q 010131 268 LVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD--INMRAKVSDFGLSR 345 (517)
Q Consensus 268 lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~--~~~~~kl~Dfg~a~ 345 (517)
+||||++ |+|.+++... ....+++..+..++.|++.||.|||+ ...+|+||||||+|||++ .++.+||+|||+++
T Consensus 133 lv~e~~~-~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~ 209 (382)
T 2vx3_A 133 LVFEMLS-YNLYDLLRNT-NFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSC 209 (382)
T ss_dssp EEEECCC-CBHHHHHHHT-TTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEecCC-CCHHHHHhhc-CcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCce
Confidence 9999995 5999998754 23568999999999999999999994 127999999999999995 47889999999998
Q ss_pred ccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCC
Q 010131 346 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVED 402 (517)
Q Consensus 346 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~ 402 (517)
...... ....||+.|+|||++.+..++.++|||||||++|||+||+.||...+
T Consensus 210 ~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~ 262 (382)
T 2vx3_A 210 QLGQRI----YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262 (382)
T ss_dssp ETTCCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred eccccc----ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 765432 23458999999999999999999999999999999999999997443
No 235
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=5.7e-40 Score=327.75 Aligned_cols=253 Identities=21% Similarity=0.294 Sum_probs=192.7
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc--hhHHHHHHHHHHHhcCCCCCccccceeeecCCe------e
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS--HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ------R 266 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~------~ 266 (517)
+|.+.+.||+|+||.||+|... +|+.||||++..... ...+.+.+|+.++++++||||+++++++...+. .
T Consensus 25 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 104 (353)
T 3coi_A 25 TYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDF 104 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCC
T ss_pred eEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeE
Confidence 3556789999999999999876 689999999975432 235678899999999999999999999987654 4
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
++||||++ ++|.+++. ..+++..+..++.||+.||+|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 105 ~lv~e~~~-~~l~~~~~-----~~~~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~ 175 (353)
T 3coi_A 105 YLVMPFMQ-TDLQKIMG-----LKFSEEKIQYLVYQMLKGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARH 175 (353)
T ss_dssp EEEEECCS-EEGGGTTT-----SCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSSCCGGGEEECTTCCEEECSTTCTTC
T ss_pred EEEecccc-CCHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEeECCCCcEEEeecccccC
Confidence 99999997 68888764 348999999999999999999999 9999999999999999999999999999987
Q ss_pred cCCCCcccccccccCCCCcCCCccCC-CCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcC-----
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGN-QQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKG----- 420 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~----- 420 (517)
.... .....+|+.|+|||.+.+ ..++.++|||||||++|+|++|+.||...+..+ ....+.......
T Consensus 176 ~~~~----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~ 248 (353)
T 3coi_A 176 ADAE----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD---QLTQILKVTGVPGTEFV 248 (353)
T ss_dssp ------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH---HHHHHHHHHCBCCHHHH
T ss_pred CCCC----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH---HHHHHHHHhCCCCHHHH
Confidence 5432 223457999999999876 678999999999999999999999997443211 111111110000
Q ss_pred -------------CcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 421 -------------DVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 421 -------------~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.......+.+ ..........+.+++.+||+.||++|||++|+++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 249 QKLNDKAAKSYIQSLPQTPRKDF-TQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp TTCSCHHHHHHHHTSCBCSSCCT-TTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHhhHHHHHHHHhCcCCCCccH-HHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0000000000 0111223457889999999999999999999986
No 236
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=5.7e-40 Score=327.70 Aligned_cols=259 Identities=21% Similarity=0.248 Sum_probs=195.5
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecC-----CeeEE
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEE-----HQRIL 268 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~-----~~~~l 268 (517)
.|.+.+.||+|+||.||+|... +|+.||||++..... .....+.+|+.++++++||||+++++++... ...++
T Consensus 12 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~l 91 (353)
T 2b9h_A 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYI 91 (353)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEE
T ss_pred ceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEE
Confidence 4556789999999999999876 689999999975433 3456788999999999999999999987654 67899
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
||||+. ++|.+++.. ..+++..+..++.|++.||+|||+ .+|+||||||+||+++.++.+||+|||++....
T Consensus 92 v~e~~~-~~L~~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 163 (353)
T 2b9h_A 92 IQELMQ-TDLHRVIST----QMLSDDHIQYFIYQTLRAVKVLHG---SNVIHRDLKPSNLLINSNCDLKVCDFGLARIID 163 (353)
T ss_dssp EECCCS-EEHHHHHHH----CCCCHHHHHHHHHHHHHHHHHHHH---TTEECSCCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEeccC-ccHHHHHhh----cCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEEcCCCcEEEEecccccccc
Confidence 999996 689998863 468999999999999999999999 999999999999999999999999999998764
Q ss_pred CCCcc---------cccccccCCCCcCCCccC-CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHh
Q 010131 349 EDLTH---------ISSVARGTVGYLDPEYYG-NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIK 418 (517)
Q Consensus 349 ~~~~~---------~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 418 (517)
..... ......||+.|+|||++. +..++.++|||||||++|+|++|+.||...+... ....+.....
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~---~~~~~~~~~~ 240 (353)
T 2b9h_A 164 ESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH---QLLLIFGIIG 240 (353)
T ss_dssp ----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH---HHHHHHHHHC
T ss_pred cccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH---HHHHHHHHhC
Confidence 32211 112345899999999865 4788999999999999999999999997543211 1111111111
Q ss_pred cCCccc----ccCc-------cc--cCCC-----CHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 419 KGDVIS----IVDP-------VL--IGNV-----KIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 419 ~~~~~~----~~d~-------~l--~~~~-----~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
...... ...+ .+ .... .......+.+++.+||+.||++|||++|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000 0000 00 0000 0122346789999999999999999999987
No 237
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=9.5e-40 Score=322.57 Aligned_cols=253 Identities=26% Similarity=0.333 Sum_probs=177.2
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc-hhHHHHHHHHH-HHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-HRTQQFVTEVA-LLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~E~~-~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
.|.+.+.||+|+||.||+|... +|+.||||++..... ....++..|+. +++.++||||+++++++.+.+..++||||
T Consensus 23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~ 102 (327)
T 3aln_A 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMEL 102 (327)
T ss_dssp SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEee
Confidence 3456788999999999999886 689999999976533 33445666666 67778999999999999999999999999
Q ss_pred cCCCCHHhHhhccC--CCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 273 MHNGTLRDRLHGSV--NQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 273 ~~~gsL~~~l~~~~--~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
+++ +|.+++.... ....+++..+..++.|++.||.|||+ . +++||||||+||+++.++.+||+|||++.....
T Consensus 103 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~---~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 178 (327)
T 3aln_A 103 MST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKE---NLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVD 178 (327)
T ss_dssp CSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHH---HHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---
T ss_pred cCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhc---cCCEeECCCCHHHEEEcCCCCEEEccCCCceeccc
Confidence 975 8877765311 25678999999999999999999999 7 999999999999999999999999999987654
Q ss_pred CCcccccccccCCCCcCCCcc----CCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 350 DLTHISSVARGTVGYLDPEYY----GNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~----~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
... .....||+.|+|||.+ .+..++.++||||||+++|+|++|+.||....... +.... ...+.
T Consensus 179 ~~~--~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-----~~~~~-~~~~~---- 246 (327)
T 3aln_A 179 SIA--KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVF-----DQLTQ-VVKGD---- 246 (327)
T ss_dssp -----------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC------------CC-CCCSC----
T ss_pred ccc--cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHH-----HHHHH-HhcCC----
Confidence 322 2223589999999998 46678999999999999999999999997322110 00000 00011
Q ss_pred cCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 426 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 426 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.+.+...........+.+++.+||+.||++|||+.|+++
T Consensus 247 -~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 247 -PPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp -CCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred -CCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 111111111123346889999999999999999999976
No 238
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=5.4e-40 Score=327.83 Aligned_cols=262 Identities=19% Similarity=0.251 Sum_probs=200.4
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec-CC-cEEEEEEecCCCchhHHHHHHHHHHHhcCCCCC------ccccceeeec
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK-DG-KEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN------LVPLIGYCEE 262 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n------iv~~~~~~~~ 262 (517)
+.....|++.+.||+|+||+||+|... ++ +.||+|++... ....+.+.+|+.++++++|++ ++.+++++..
T Consensus 15 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~ 93 (355)
T 2eu9_A 15 DWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNF 93 (355)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEE
T ss_pred ceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeee
Confidence 333456778899999999999999875 34 68999999743 344567889999999997655 8899999999
Q ss_pred CCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEe------------
Q 010131 263 EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILL------------ 330 (517)
Q Consensus 263 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill------------ 330 (517)
.+..++||||+ ++++.+++... ....+++..++.++.||+.||+|||+ .+|+||||||+|||+
T Consensus 94 ~~~~~lv~e~~-~~~l~~~l~~~-~~~~~~~~~~~~i~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~~~~~~~ 168 (355)
T 2eu9_A 94 HGHMCIAFELL-GKNTFEFLKEN-NFQPYPLPHVRHMAYQLCHALRFLHE---NQLTHTDLKPENILFVNSEFETLYNEH 168 (355)
T ss_dssp TTEEEEEEECC-CCBHHHHHHHT-TTCCCCHHHHHHHHHHHHHHHHHHHT---TTEECCCCCGGGEEESCCCEEEEECCC
T ss_pred CCeEEEEEecc-CCChHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEeccccccccccc
Confidence 99999999999 66777777643 23579999999999999999999999 999999999999999
Q ss_pred -------CCCCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCc
Q 010131 331 -------DINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDF 403 (517)
Q Consensus 331 -------~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~ 403 (517)
+.++.+||+|||++....... ....||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 169 ~~~~~~~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~ 244 (355)
T 2eu9_A 169 KSCEEKSVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHEN 244 (355)
T ss_dssp -CCCEEEESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSH
T ss_pred ccccccccCCCcEEEeecCccccccccc----cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCH
Confidence 567899999999998654332 234589999999999999999999999999999999999999974332
Q ss_pred cccccHHHHHHHHHhc--------CCcccc-cCccc---------------------cCCCCHHHHHHHHHHHHHhhccC
Q 010131 404 GAELNIVHWARSMIKK--------GDVISI-VDPVL---------------------IGNVKIESIWRIAEVAIQCVEQR 453 (517)
Q Consensus 404 ~~~~~~~~~~~~~~~~--------~~~~~~-~d~~l---------------------~~~~~~~~~~~l~~li~~cl~~~ 453 (517)
.. ....+...... ...... ..... ...........+.+++.+||+.|
T Consensus 245 ~~---~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d 321 (355)
T 2eu9_A 245 RE---HLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFD 321 (355)
T ss_dssp HH---HHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSS
T ss_pred HH---HHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCC
Confidence 21 11111111100 000000 00000 00112234557889999999999
Q ss_pred CCCCCCHHHHHH
Q 010131 454 GFSRPKMQEIVL 465 (517)
Q Consensus 454 P~~RPs~~evl~ 465 (517)
|++|||+.|+++
T Consensus 322 P~~Rpt~~e~l~ 333 (355)
T 2eu9_A 322 PAQRITLAEALL 333 (355)
T ss_dssp TTTSCCHHHHTT
T ss_pred hhhCcCHHHHhc
Confidence 999999999975
No 239
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=5.5e-40 Score=346.38 Aligned_cols=270 Identities=22% Similarity=0.319 Sum_probs=206.7
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCC-chhHHHHHHHHHHHhcCCCCCccccceeeec------CCee
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC-SHRTQQFVTEVALLSRIHHRNLVPLIGYCEE------EHQR 266 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~ 266 (517)
..|.+.+.||+|+||.||+|.+. +|+.||||++.... ....+.+.+|++++++++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 56888999999999999999875 68999999987643 3445679999999999999999999998765 6678
Q ss_pred EEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCc---EEEccccC
Q 010131 267 ILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMR---AKVSDFGL 343 (517)
Q Consensus 267 ~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~---~kl~Dfg~ 343 (517)
++||||+++|+|.+++........+++..++.++.|++.||+|||+ .+|+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs---~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHE---NRIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHH---TTBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 9999999999999999865555579999999999999999999999 99999999999999997765 99999999
Q ss_pred ccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCC--
Q 010131 344 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGD-- 421 (517)
Q Consensus 344 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~-- 421 (517)
+........ .....||+.|+|||.+.+..++.++|||||||++|+|++|+.||...... ..|.........
T Consensus 171 a~~~~~~~~--~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~-----~~~~~~i~~~~~~~ 243 (676)
T 3qa8_A 171 AKELDQGEL--CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQP-----VQWHGKVREKSNEH 243 (676)
T ss_dssp CCBTTSCCC--CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCHH-----HHSSTTCC------
T ss_pred ccccccccc--cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccch-----hhhhhhhhcccchh
Confidence 987654332 23456899999999999999999999999999999999999999732111 111100000000
Q ss_pred --cccccCc--------cccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHH-----HHHHHHhhhhhh
Q 010131 422 --VISIVDP--------VLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQE-----IVLAIQDSIKIE 474 (517)
Q Consensus 422 --~~~~~d~--------~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~e-----vl~~L~~~~~~~ 474 (517)
..+.... .............+.+++.+||+.||++|||++| ..+.++++....
T Consensus 244 ~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~F~~l~~iL~~k 311 (676)
T 3qa8_A 244 IVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGCFQALDSILSLK 311 (676)
T ss_dssp CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTTHHHHHHHHCCC
T ss_pred hhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHHHHHHHHHHhcc
Confidence 0000000 0011233446678999999999999999999988 556677666543
No 240
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=2.9e-39 Score=320.20 Aligned_cols=250 Identities=20% Similarity=0.281 Sum_probs=170.1
Q ss_pred HHhhh-cccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCccccceeeec----CCeeEEE
Q 010131 196 TNNFC-KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGYCEE----EHQRILV 269 (517)
Q Consensus 196 ~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~----~~~~~lv 269 (517)
.|.+. +.||+|+||+||+|... +|+.||||++.... ....+....++.++||||+++++++.. ....++|
T Consensus 29 ~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv 104 (336)
T 3fhr_A 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLII 104 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEE
T ss_pred eeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEE
Confidence 34553 46999999999999887 68999999986531 122223334566799999999999876 4458999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC---CCcEEEccccCccc
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQ 346 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~a~~ 346 (517)
|||+++|+|.+++... ....+++..++.++.|++.||.|||+ .+|+||||||+||+++. ++.+||+|||++..
T Consensus 105 ~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~ql~~~l~~LH~---~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~ 180 (336)
T 3fhr_A 105 MECMEGGELFSRIQER-GDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE 180 (336)
T ss_dssp EECCTTEEHHHHHHTC--CCCCBHHHHHHHHHHHHHHHHHHHH---TTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred EeccCCCCHHHHHHhc-CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence 9999999999999853 23579999999999999999999999 99999999999999976 45599999999986
Q ss_pred cCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 347 AEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 347 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
..... .....+|+.|+|||++.+..++.++||||||+++|+|++|+.||......... ......+..+.. ...
T Consensus 181 ~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~---~~~~~~~~~~~~-~~~ 253 (336)
T 3fhr_A 181 TTQNA---LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS---PGMKRRIRLGQY-GFP 253 (336)
T ss_dssp C-------------------------CHHHHHHHHHHHHHHHHHHHHSSCCC-------------------------CCC
T ss_pred ccccc---cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhh---hhHHHhhhcccc-ccC
Confidence 54322 22345799999999999989999999999999999999999999743322110 000111111100 000
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. .........+.+++.+||+.||++|||++|+++
T Consensus 254 ~-----~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 254 N-----PEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp T-----TTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred c-----hhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 0 001122346889999999999999999999997
No 241
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=2.5e-39 Score=331.63 Aligned_cols=247 Identities=24% Similarity=0.348 Sum_probs=185.2
Q ss_pred hcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEEEecCCCCH
Q 010131 200 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHNGTL 278 (517)
Q Consensus 200 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~gsL 278 (517)
.+.||+|+||+||.+...+|+.||||++... ..+.+.+|+++++++ +||||+++++++.+.+..++||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 4789999999998776667999999998643 345678999999886 89999999999999999999999995 699
Q ss_pred HhHhhccCCCC----ccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCC-------------CcEEEccc
Q 010131 279 RDRLHGSVNQK----PLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDIN-------------MRAKVSDF 341 (517)
Q Consensus 279 ~~~l~~~~~~~----~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~-------------~~~kl~Df 341 (517)
.+++....... ..++..++.++.||+.||+|||+ .+|+||||||+|||++.+ +.+||+||
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DF 172 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDF 172 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHH---CCccccCCChHhEEEecCcccccccccCCCceEEEEccc
Confidence 99997532111 11334567899999999999999 999999999999999754 48999999
Q ss_pred cCccccCCCCcc---cccccccCCCCcCCCccCC-------CCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHH
Q 010131 342 GLSRQAEEDLTH---ISSVARGTVGYLDPEYYGN-------QQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIV 410 (517)
Q Consensus 342 g~a~~~~~~~~~---~~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~ 410 (517)
|+++........ ......||+.|+|||++.+ ..++.++|||||||++|||+| |+.||....... .
T Consensus 173 G~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~----~ 248 (434)
T 2rio_A 173 GLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRE----S 248 (434)
T ss_dssp TTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHH----H
T ss_pred ccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhH----H
Confidence 999876543321 1223468999999999865 678999999999999999999 999996322111 1
Q ss_pred HHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 411 HWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 411 ~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. ... +... . +.............+.+++.+||+.||++|||+.||++
T Consensus 249 ~----i~~-~~~~-~--~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 249 N----IIR-GIFS-L--DEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp H----HHH-TCCC-C--CCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H----Hhc-CCCC-c--ccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1 111 1110 0 11111123455678899999999999999999999985
No 242
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-39 Score=319.69 Aligned_cols=243 Identities=26% Similarity=0.420 Sum_probs=190.0
Q ss_pred HHHHHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCch------hHHHHHHHHHHHhcC----CCCCcccccee
Q 010131 191 ELEEATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRI----HHRNLVPLIGY 259 (517)
Q Consensus 191 ~l~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~h~niv~~~~~ 259 (517)
+.....|.+.+.||+|+||.||+|... +++.||||++...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 445567888999999999999999875 6889999999654321 223466799999988 89999999999
Q ss_pred eecCCeeEEEEEe-cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC-CCCcEE
Q 010131 260 CEEEHQRILVYEY-MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAK 337 (517)
Q Consensus 260 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~-~~~~~k 337 (517)
+...+..++|+|+ +.+++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++ .++.+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~---~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~k 180 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITE---KGPLGEGPSRCFFGQVVAAIQHCHS---RGVVHRDIKDENILIDLRRGCAK 180 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---HTEECCCCSGGGEEEETTTTEEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChhhEEEeCCCCeEE
Confidence 9999999999999 789999999974 4568999999999999999999999 9999999999999999 889999
Q ss_pred EccccCccccCCCCcccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHH
Q 010131 338 VSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSM 416 (517)
Q Consensus 338 l~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~ 416 (517)
|+|||++....... .....|+..|+|||++.+..+ +.++||||||+++|+|++|+.||.... + .
T Consensus 181 l~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~--------~----~ 245 (312)
T 2iwi_A 181 LIDFGSGALLHDEP---YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ--------E----I 245 (312)
T ss_dssp ECCCSSCEECCSSC---BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH--------H----H
T ss_pred EEEcchhhhcccCc---ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH--------H----H
Confidence 99999998765432 233458999999999876655 458999999999999999999996211 0 1
Q ss_pred HhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 417 IKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 417 ~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
.. ... .+ .......+.+++.+||+.||++|||++|+++
T Consensus 246 ~~-~~~------~~----~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 246 LE-AEL------HF----PAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp HH-TCC------CC----CTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hh-hcc------CC----cccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 11 110 01 1112336789999999999999999999986
No 243
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=1.1e-39 Score=321.18 Aligned_cols=239 Identities=24% Similarity=0.381 Sum_probs=195.4
Q ss_pred HHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCch------hHHHHHHHHHHHhcCC--CCCccccceeeecCCe
Q 010131 195 ATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH------RTQQFVTEVALLSRIH--HRNLVPLIGYCEEEHQ 265 (517)
Q Consensus 195 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~~~ 265 (517)
..|.+.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+.++++++ ||||+++++++...+.
T Consensus 43 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~ 122 (320)
T 3a99_A 43 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDS 122 (320)
T ss_dssp TTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCc
Confidence 45667899999999999999865 6899999998654221 2245678999999996 5999999999999999
Q ss_pred eEEEEEecCC-CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeC-CCCcEEEccccC
Q 010131 266 RILVYEYMHN-GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLD-INMRAKVSDFGL 343 (517)
Q Consensus 266 ~~lv~e~~~~-gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~-~~~~~kl~Dfg~ 343 (517)
.++|+|++.+ ++|.+++.. ...+++..++.++.|++.||+|||+ .+|+||||||+||+++ .++.+||+|||+
T Consensus 123 ~~lv~e~~~~~~~L~~~l~~---~~~l~~~~~~~i~~qi~~~L~~LH~---~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 123 FVLILERPEPVQDLFDFITE---RGALQEELARSFFWQVLEAVRHCHN---CGVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp EEEEEECCSSEEEHHHHHHH---HCSCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred EEEEEEcCCCCccHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHH---CCcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 9999999976 899999874 4578999999999999999999999 9999999999999999 789999999999
Q ss_pred ccccCCCCcccccccccCCCCcCCCccCCCCC-CccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCc
Q 010131 344 SRQAEEDLTHISSVARGTVGYLDPEYYGNQQL-TEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDV 422 (517)
Q Consensus 344 a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 422 (517)
+....... .....||+.|+|||++.+..+ +.++||||||+++|||++|+.||.... .... +..
T Consensus 197 ~~~~~~~~---~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------------~~~~-~~~ 260 (320)
T 3a99_A 197 GALLKDTV---YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------------EIIR-GQV 260 (320)
T ss_dssp CEECCSSC---BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------------HHHH-CCC
T ss_pred cccccccc---ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------------hhhc-ccc
Confidence 98765432 223458999999999876655 688999999999999999999996221 0111 111
Q ss_pred ccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 423 ISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 423 ~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. .... ....+.+++.+||+.||++|||++|+++
T Consensus 261 ~------~~~~----~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 261 F------FRQR----VSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp C------CSSC----CCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred c------cccc----CCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0 0111 1236789999999999999999999987
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=1.1e-38 Score=313.54 Aligned_cols=249 Identities=23% Similarity=0.330 Sum_probs=178.4
Q ss_pred HHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCch-h-HHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEEe
Q 010131 196 TNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSH-R-TQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYEY 272 (517)
Q Consensus 196 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~-~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 272 (517)
.|.+.+.||+|+||.||+|.+. +|+.||||++...... . .+.+.++..+++.++||||+++++++.+.+..++||||
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~ 105 (318)
T 2dyl_A 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMEL 105 (318)
T ss_dssp GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC
T ss_pred cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEec
Confidence 4566789999999999999886 6899999999765332 2 23344555678888999999999999999999999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCC-CcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNP-GIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~-~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
+ ++.+..+... ....+++..++.++.|++.||.|||+ + +++|+||||+||+++.++.+||+|||++.......
T Consensus 106 ~-~~~~~~l~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 179 (318)
T 2dyl_A 106 M-GTCAEKLKKR--MQGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK 179 (318)
T ss_dssp C-SEEHHHHHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH---HHCCCCCCCCGGGEEECTTSCEEECCCTTC-------
T ss_pred c-CCcHHHHHHH--hccCCCHHHHHHHHHHHHHHHHHHHh---hCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc
Confidence 9 5555555442 24678999999999999999999998 6 99999999999999999999999999997654432
Q ss_pred cccccccccCCCCcCCCccC-----CCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCccccc
Q 010131 352 THISSVARGTVGYLDPEYYG-----NQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIV 426 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (517)
. .....+++.|+|||.+. ...++.++||||||+++|+|++|+.||..... ..+........ ......
T Consensus 180 ~--~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~-----~~~~~~~~~~~-~~~~~~ 251 (318)
T 2dyl_A 180 A--KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKT-----DFEVLTKVLQE-EPPLLP 251 (318)
T ss_dssp ---------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCS-----HHHHHHHHHHS-CCCCCC
T ss_pred c--ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCc-----cHHHHHHHhcc-CCCCCC
Confidence 2 22345899999999984 55788999999999999999999999973221 11222222222 111110
Q ss_pred CccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 427 DPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 427 d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
. .......+.+++.+||+.||.+|||++|+++
T Consensus 252 ~-------~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 252 G-------HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp S-------SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred c-------cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0 0012236889999999999999999999986
No 245
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=325.21 Aligned_cols=246 Identities=24% Similarity=0.335 Sum_probs=183.3
Q ss_pred HhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEEEEEecCC
Q 010131 197 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRILVYEYMHN 275 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~lv~e~~~~ 275 (517)
+.+.+.||+|+||+||.....+|+.||||++...... .+.+|+++++++ +||||+++++++.+.+..++||||+.
T Consensus 26 y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~~---~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~- 101 (432)
T 3p23_A 26 FCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFS---FADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA- 101 (432)
T ss_dssp EEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTEE---ECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-
T ss_pred EecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHHH---HHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-
Confidence 4456889999999976555567999999999754322 356799999999 79999999999999999999999996
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC-----CCcEEEccccCccccCCC
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI-----NMRAKVSDFGLSRQAEED 350 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~-----~~~~kl~Dfg~a~~~~~~ 350 (517)
|+|.+++... .....+..++.++.||+.||+|||+ .+|+||||||+|||++. ...+||+|||+++.....
T Consensus 102 g~L~~~l~~~--~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~ 176 (432)
T 3p23_A 102 ATLQEYVEQK--DFAHLGLEPITLLQQTTSGLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVG 176 (432)
T ss_dssp EEHHHHHHSS--SCCCCSSCHHHHHHHHHHHHHHHHH---TTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC---
T ss_pred CCHHHHHHhc--CCCccchhHHHHHHHHHHHHHHHHH---CcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCC
Confidence 6999999753 2334555677899999999999999 99999999999999953 346889999999876543
Q ss_pred Cc--ccccccccCCCCcCCCccC---CCCCCccceehhHHHHHHHHHh-CCCCCCCCCccccccHHHHHHHHHhcCCccc
Q 010131 351 LT--HISSVARGTVGYLDPEYYG---NQQLTEKSDVYSFGVVLLELIS-GKKPVSVEDFGAELNIVHWARSMIKKGDVIS 424 (517)
Q Consensus 351 ~~--~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~slG~~l~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 424 (517)
.. .......||+.|+|||++. ...++.++|||||||++|||+| |..||...... . ...... .....
T Consensus 177 ~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~----~---~~~~~~-~~~~~ 248 (432)
T 3p23_A 177 RHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQR----Q---ANILLG-ACSLD 248 (432)
T ss_dssp ---------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTH----H---HHHHTT-CCCCT
T ss_pred CcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHH----H---HHHHhc-cCCcc
Confidence 21 1223456899999999997 4567889999999999999999 99998522111 0 111111 11111
Q ss_pred ccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 425 IVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 425 ~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
... ........+.+++.+||+.||++|||++||++
T Consensus 249 ~~~------~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 249 CLH------PEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp TSC------TTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccC------ccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111 11233445789999999999999999999984
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=8.6e-38 Score=302.19 Aligned_cols=235 Identities=14% Similarity=0.190 Sum_probs=183.4
Q ss_pred HHHHhhhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---hhHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEE
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILV 269 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 269 (517)
..+|.+.+.||+|+||.||+|.+. +++.||||++..... ...+.+.+|+.++.+++||||+++++++.+.+..++|
T Consensus 30 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 109 (286)
T 3uqc_A 30 NGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVV 109 (286)
T ss_dssp TTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEE
T ss_pred cCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEE
Confidence 345777899999999999999886 489999999976533 2346789999999999999999999999999999999
Q ss_pred EEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCC
Q 010131 270 YEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEE 349 (517)
Q Consensus 270 ~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~ 349 (517)
|||+++++|.+++.. . ....++..++.|++.||+|||+ ++|+||||||+||+++.++.+||++++
T Consensus 110 ~e~~~g~~L~~~l~~----~-~~~~~~~~i~~ql~~aL~~lH~---~givH~Dikp~NIll~~~g~~kl~~~~------- 174 (286)
T 3uqc_A 110 AEWIRGGSLQEVADT----S-PSPVGAIRAMQSLAAAADAAHR---AGVALSIDHPSRVRVSIDGDVVLAYPA------- 174 (286)
T ss_dssp EECCCEEEHHHHHTT----C-CCHHHHHHHHHHHHHHHHHHHH---TTCCCCCCSGGGEEEETTSCEEECSCC-------
T ss_pred EEecCCCCHHHHHhc----C-CChHHHHHHHHHHHHHHHHHHH---CCCccCCCCcccEEEcCCCCEEEEecc-------
Confidence 999999999999852 2 3556788999999999999999 999999999999999999999998543
Q ss_pred CCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcc
Q 010131 350 DLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPV 429 (517)
Q Consensus 350 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 429 (517)
|++ .++.++|||||||++|||+||+.||...+........ .... .+.. ..+
T Consensus 175 --------------~~~-------~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~---~~~~-~~~~---~~~- 225 (286)
T 3uqc_A 175 --------------TMP-------DANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPA---ERDT-AGQP---IEP- 225 (286)
T ss_dssp --------------CCT-------TCCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEEC---CBCT-TSCB---CCH-
T ss_pred --------------ccC-------CCCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHH---HHHh-ccCC---CCh-
Confidence 333 3688999999999999999999999854332110000 0000 0000 000
Q ss_pred ccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHHHHHhhhhhhc
Q 010131 430 LIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVLAIQDSIKIEK 475 (517)
Q Consensus 430 l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~~L~~~~~~~~ 475 (517)
.......+..+.+++.+||+.||++| |+.|+++.|+++.....
T Consensus 226 --~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~~~ 268 (286)
T 3uqc_A 226 --ADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAVAD 268 (286)
T ss_dssp --HHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC---
T ss_pred --hhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhccCC
Confidence 00011223468899999999999999 99999999999876544
No 247
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-38 Score=342.94 Aligned_cols=240 Identities=18% Similarity=0.281 Sum_probs=194.2
Q ss_pred HHHHhhhcccCCCCceEEEEEEec--CCcEEEEEEecCCCc-hhHHHHHHHHHHHhcCCCCCccccceeeecCCe-----
Q 010131 194 EATNNFCKKIGKGSFGSVYYGKMK--DGKEVAVKIMADSCS-HRTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQ----- 265 (517)
Q Consensus 194 ~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----- 265 (517)
...|.+.+.||+|+||+||+|.+. +|+.||||++..... .....+.+|+.++++++||||+++++++...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 346778899999999999999876 589999999865433 345678999999999999999999999987665
Q ss_pred eEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcc
Q 010131 266 RILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 345 (517)
Q Consensus 266 ~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 345 (517)
.++||||+++++|.+++. ..+++.+++.++.||+.||.|||+ ++|+||||||+|||++.+ .+||+|||+++
T Consensus 159 ~~lv~E~~~g~~L~~~~~-----~~l~~~~~~~~~~qi~~aL~~lH~---~giiHrDlkp~NIll~~~-~~kl~DFG~a~ 229 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKG-----QKLPVAEAIAYLLEILPALSYLHS---IGLVYNDLKPENIMLTEE-QLKLIDLGAVS 229 (681)
T ss_dssp EEEEEECCCCEECC---------CCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECSS-CEEECCCTTCE
T ss_pred eEEEEEeCCCCcHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecccChHHeEEeCC-cEEEEecccch
Confidence 699999999999988775 269999999999999999999999 999999999999999985 89999999998
Q ss_pred ccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccc
Q 010131 346 QAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISI 425 (517)
Q Consensus 346 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (517)
..... ....||+.|+|||++.+.. +.++|||||||++|+|++|..||.........
T Consensus 230 ~~~~~-----~~~~gt~~y~aPE~~~~~~-~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~------------------ 285 (681)
T 2pzi_A 230 RINSF-----GYLYGTPGFQAPEIVRTGP-TVATDIYTVGRTLAALTLDLPTRNGRYVDGLP------------------ 285 (681)
T ss_dssp ETTCC-----SCCCCCTTTSCTTHHHHCS-CHHHHHHHHHHHHHHHHSCCCEETTEECSSCC------------------
T ss_pred hcccC-----CccCCCccccCHHHHcCCC-CCceehhhhHHHHHHHHhCCCCCccccccccc------------------
Confidence 76543 3345899999999987654 88999999999999999999988632111000
Q ss_pred cCccccCCCCHHHHHHHHHHHHHhhccCCCCCC-CHHHHHHHHHhhh
Q 010131 426 VDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRP-KMQEIVLAIQDSI 471 (517)
Q Consensus 426 ~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RP-s~~evl~~L~~~~ 471 (517)
...........+.+++.+||+.||++|| +++++.+.|..+.
T Consensus 286 -----~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~ 327 (681)
T 2pzi_A 286 -----EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTGVL 327 (681)
T ss_dssp -----TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHH
T ss_pred -----ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHHHH
Confidence 0000112234688999999999999999 5777777777665
No 248
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=6.1e-38 Score=310.85 Aligned_cols=243 Identities=18% Similarity=0.220 Sum_probs=184.1
Q ss_pred HHHHHHhhhcccCCCCceEEEEEEecCCcEEEEEEecCCC--------chhHHHHHHHHHHHhcCC---------C----
Q 010131 192 LEEATNNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSC--------SHRTQQFVTEVALLSRIH---------H---- 250 (517)
Q Consensus 192 l~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------h---- 250 (517)
+....|.+.+.||+|+||+||+|++ +|+.||||++.... ....+.+.+|+.+++.++ |
T Consensus 17 ~~~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv 95 (336)
T 2vuw_A 17 LPTEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFI 95 (336)
T ss_dssp SCHHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBC
T ss_pred cccccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchh
Confidence 3456788899999999999999998 58999999997542 223477889999998886 4
Q ss_pred -------------CCccccceeeec-------------CCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHH
Q 010131 251 -------------RNLVPLIGYCEE-------------EHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAA 304 (517)
Q Consensus 251 -------------~niv~~~~~~~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia 304 (517)
|||+++++++.+ .+..++||||+++|++.+.+. ...+++..+..++.||+
T Consensus 96 ~l~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~----~~~~~~~~~~~i~~qi~ 171 (336)
T 2vuw_A 96 GLNSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMR----TKLSSLATAKSILHQLT 171 (336)
T ss_dssp CEEEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGT----TTCCCHHHHHHHHHHHH
T ss_pred hhcceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHH----hcCCCHHHHHHHHHHHH
Confidence 455555555443 678999999999997766664 35689999999999999
Q ss_pred HHHHHHh-cCCCCCcEecCCCCCCeEeCCCC--------------------cEEEccccCccccCCCCcccccccccCCC
Q 010131 305 KGLEYLH-TGCNPGIIHRDVKSSNILLDINM--------------------RAKVSDFGLSRQAEEDLTHISSVARGTVG 363 (517)
Q Consensus 305 ~aL~~LH-~~~~~~ivH~dlk~~Nill~~~~--------------------~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~ 363 (517)
.||+||| + .+|+||||||+|||++.++ .+||+|||+++..... ...||+.
T Consensus 172 ~aL~~lH~~---~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~------~~~gt~~ 242 (336)
T 2vuw_A 172 ASLAVAEAS---LRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG------IVVFCDV 242 (336)
T ss_dssp HHHHHHHHH---HCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT------EEECCCC
T ss_pred HHHHHHHHh---CCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC------cEEEeec
Confidence 9999999 8 9999999999999999887 8999999999876542 2358999
Q ss_pred CcCCCccCCCCCCccceehhHHHH-HHHHHhCCCCCCCCCccccccHHHHHHHHHh-cCCcccccCccccCCCCHHHHHH
Q 010131 364 YLDPEYYGNQQLTEKSDVYSFGVV-LLELISGKKPVSVEDFGAELNIVHWARSMIK-KGDVISIVDPVLIGNVKIESIWR 441 (517)
Q Consensus 364 y~aPE~~~~~~~~~~~Dv~slG~~-l~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~l~~~~~~~~~~~ 441 (517)
|+|||++.+.. +.++||||+|++ .+++++|..||... .........+. ..... ..............
T Consensus 243 y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~s~~ 311 (336)
T 2vuw_A 243 SMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNV------LWLHYLTDKMLKQMTFK----TKCNTPAMKQIKRK 311 (336)
T ss_dssp TTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHH------HHHHHHHHHHHHTCCCS----SCCCSHHHHHHHHH
T ss_pred ccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcch------hhhhHHHHhhhhhhccC----cccchhhhhhcCHH
Confidence 99999998766 899999998777 77888999998511 00011111111 11110 00011112346678
Q ss_pred HHHHHHHhhccCCCCCCCHHHHH
Q 010131 442 IAEVAIQCVEQRGFSRPKMQEIV 464 (517)
Q Consensus 442 l~~li~~cl~~~P~~RPs~~evl 464 (517)
+.+|+.+||+.| |++|++
T Consensus 312 ~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 312 IQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHGGGSS-----SHHHHH
T ss_pred HHHHHHHHhccC-----CHHHHH
Confidence 999999999976 898887
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=8.9e-37 Score=297.38 Aligned_cols=220 Identities=22% Similarity=0.312 Sum_probs=174.0
Q ss_pred cccCCCCceEEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHH-hcCCCCCccccceeeec----CCeeEEEEEecC
Q 010131 201 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALL-SRIHHRNLVPLIGYCEE----EHQRILVYEYMH 274 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~h~niv~~~~~~~~----~~~~~lv~e~~~ 274 (517)
+.||+|+||.||+|... +++.||+|++... ..+.+|+.++ +.++||||+++++++.. ....++||||++
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~~ 98 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 98 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeecC
Confidence 67999999999999875 6899999998642 4567888888 55589999999999876 677899999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCC---CCcEEEccccCccccCCCC
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDI---NMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~---~~~~kl~Dfg~a~~~~~~~ 351 (517)
+|+|.+++... ....+++..++.++.|++.||+|||+ .+|+||||||+||+++. ++.+||+|||++....
T Consensus 99 ~~~L~~~l~~~-~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~--- 171 (299)
T 3m2w_A 99 GGELFSRIQDR-GDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--- 171 (299)
T ss_dssp SCBHHHHHHHC-TTCCCBHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---
T ss_pred CCcHHHHHHhc-cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEecCCCCCcEEEeccccccccc---
Confidence 99999999854 24579999999999999999999999 99999999999999998 7889999999886532
Q ss_pred cccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCCCCCccccccHHHHHHHHHhcCCcccccCcccc
Q 010131 352 THISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLI 431 (517)
Q Consensus 352 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~ 431 (517)
+..++.++|||||||++|||+||+.||........ .......+.....
T Consensus 172 --------------------~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~-----------~~~~~~~~~~~~~- 219 (299)
T 3m2w_A 172 --------------------GEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------SPGMKTRIRMGQY- 219 (299)
T ss_dssp --------------------TCGGGGHHHHHHHHHHHHHHHHSSCSCCC------------------CCSCCSSCTTCC-
T ss_pred --------------------cccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhh-----------hHHHHHHHhhccc-
Confidence 23567899999999999999999999963321110 0000000000000
Q ss_pred CCCC----HHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 432 GNVK----IESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 432 ~~~~----~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
... ......+.+++.+||+.||++|||+.|+++
T Consensus 220 -~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 220 -EFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMN 256 (299)
T ss_dssp -SSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred -cCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 011 112346889999999999999999999987
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=2.9e-37 Score=314.28 Aligned_cols=237 Identities=16% Similarity=0.112 Sum_probs=177.6
Q ss_pred hhcccCCCCceEEEEEEec-CCcEEEEEEecCCCc---hhHHHHHHHHHHHhcCCC-CCccccce---------------
Q 010131 199 FCKKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS---HRTQQFVTEVALLSRIHH-RNLVPLIG--------------- 258 (517)
Q Consensus 199 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~h-~niv~~~~--------------- 258 (517)
..+.||+|+||+||+|++. +|+.||||++..... ...+.+.+|+.+++.++| +|......
T Consensus 82 ~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (413)
T 3dzo_A 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQ 161 (413)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC
T ss_pred EecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCC
Confidence 4678999999999999865 799999999874322 235779999999999977 33221111
Q ss_pred ------eeec-----CCeeEEEEEecCCCCHHhHhhcc----CCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCC
Q 010131 259 ------YCEE-----EHQRILVYEYMHNGTLRDRLHGS----VNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDV 323 (517)
Q Consensus 259 ------~~~~-----~~~~~lv~e~~~~gsL~~~l~~~----~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dl 323 (517)
++.. ....+++|+++ +++|.+++... .....+++..++.++.|++.||+|||+ ++|+||||
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~---~~iiHrDi 237 (413)
T 3dzo_A 162 KKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHH---YGLVHTYL 237 (413)
T ss_dssp ---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEECSCC
T ss_pred CCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCc
Confidence 1111 12345666655 78999888421 134568899999999999999999999 99999999
Q ss_pred CCCCeEeCCCCcEEEccccCccccCCCCcccccccccCCCCcCCCcc----------CCCCCCccceehhHHHHHHHHHh
Q 010131 324 KSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYY----------GNQQLTEKSDVYSFGVVLLELIS 393 (517)
Q Consensus 324 k~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~----------~~~~~~~~~Dv~slG~~l~ellt 393 (517)
||+|||++.++.+||+|||+++..... .....| +.|+|||++ .+..++.++|||||||++|||+|
T Consensus 238 Kp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~ellt 312 (413)
T 3dzo_A 238 RPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWC 312 (413)
T ss_dssp CGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHH
T ss_pred ccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHH
Confidence 999999999999999999998875543 233457 999999998 66678899999999999999999
Q ss_pred CCCCCCCCCccccccHHHHHHHHHhcCCcccccCccccCCCCHHHHHHHHHHHHHhhccCCCCCCCHHHHHH
Q 010131 394 GKKPVSVEDFGAELNIVHWARSMIKKGDVISIVDPVLIGNVKIESIWRIAEVAIQCVEQRGFSRPKMQEIVL 465 (517)
Q Consensus 394 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~evl~ 465 (517)
|+.||......... ...+... .. .+..+.+++.+||+.||++||++.|+++
T Consensus 313 g~~Pf~~~~~~~~~---------------~~~~~~~--~~----~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 313 ADLPNTDDAALGGS---------------EWIFRSC--KN----IPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp SSCCCCTTGGGSCS---------------GGGGSSC--CC----CCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCCCCcchhhhH---------------HHHHhhc--cc----CCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 99999743322110 0011100 11 1246889999999999999999888754
No 251
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.96 E-value=2.1e-31 Score=280.49 Aligned_cols=186 Identities=17% Similarity=0.143 Sum_probs=131.1
Q ss_pred cccCCCCceEEEEEEec-CCcEEEEEEecCCC----------chhHHHHHHHHHHHhcC-CCCCccccceeeecCCeeEE
Q 010131 201 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSC----------SHRTQQFVTEVALLSRI-HHRNLVPLIGYCEEEHQRIL 268 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~E~~~l~~l-~h~niv~~~~~~~~~~~~~l 268 (517)
...+.|++|.+..++.. -|+.+++|++.... ....++|.+|+++|+++ .|+||+++++++++++..||
T Consensus 240 ~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yL 319 (569)
T 4azs_A 240 NQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWL 319 (569)
T ss_dssp CC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEE
T ss_pred hccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEE
Confidence 34677777777766432 58899999996532 12235699999999999 79999999999999999999
Q ss_pred EEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccC
Q 010131 269 VYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAE 348 (517)
Q Consensus 269 v~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~ 348 (517)
||||++|++|.+++.. .++++.. +|+.||+.||+|+|+ +|||||||||+|||++.++.+||+|||+|+...
T Consensus 320 VMEyv~G~~L~d~i~~---~~~l~~~---~I~~QIl~AL~ylH~---~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~ 390 (569)
T 4azs_A 320 VMEKLPGRLLSDMLAA---GEEIDRE---KILGSLLRSLAALEK---QGFWHDDVRPWNVMVDARQHARLIDFGSIVTTP 390 (569)
T ss_dssp EEECCCSEEHHHHHHT---TCCCCHH---HHHHHHHHHHHHHHH---TTCEESCCCGGGEEECTTSCEEECCCTTEESCC
T ss_pred EEecCCCCcHHHHHHh---CCCCCHH---HHHHHHHHHHHHHHH---CCceeccCchHhEEECCCCCEEEeecccCeeCC
Confidence 9999999999999983 4566654 478999999999999 999999999999999999999999999998765
Q ss_pred CCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCC
Q 010131 349 EDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKP 397 (517)
Q Consensus 349 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p 397 (517)
..... .....||++|+|||++.+ .+..++|+||+|++++++.++..+
T Consensus 391 ~~~~~-~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~~~ 437 (569)
T 4azs_A 391 QDCSW-PTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPWSN 437 (569)
T ss_dssp ---CC-SHHHHHHHHHHHHHHC------------------CCCCTTHHH
T ss_pred CCCcc-ccCceechhhccHHHhCC-CCCCcccccccccchhhhccccch
Confidence 54332 233569999999999976 467789999999998887665444
No 252
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.94 E-value=1.4e-27 Score=250.00 Aligned_cols=183 Identities=17% Similarity=0.209 Sum_probs=147.4
Q ss_pred hcccCCCCceEEEEEEecCCcEEEEEEecCCCch--------hHHHHHHHHHHHhcCCCCCccccceeeecCCeeEEEEE
Q 010131 200 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSH--------RTQQFVTEVALLSRIHHRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 200 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 271 (517)
.+.||+|+||.||+|... ++.+++|+....... ..+.+.+|++++++++||||+++..++...+..++|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~~-~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSYL-DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEECS-SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEEC-CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 568999999999999655 788999986543211 13458999999999999999977777777778899999
Q ss_pred ecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCC
Q 010131 272 YMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDL 351 (517)
Q Consensus 272 ~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~ 351 (517)
|+++++|.+++.. +..++.|+++||+|||+ ++|+||||||+|||++. .+||+|||+++......
T Consensus 420 ~~~ggsL~~~l~~-----------~~~i~~qi~~aL~~LH~---~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~ 483 (540)
T 3en9_A 420 YINGKLAKDVIED-----------NLDIAYKIGEIVGKLHK---NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDE 483 (540)
T ss_dssp CCCSEEHHHHSTT-----------CTHHHHHHHHHHHHHHH---TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHH
T ss_pred CCCCCCHHHHHHH-----------HHHHHHHHHHHHHHHHH---CcCccCCCCHHHEEECC--eEEEEECccCEECCCcc
Confidence 9999999999973 56899999999999999 99999999999999998 99999999999876532
Q ss_pred ccc------ccccccCCCCcCCCccCC--CCCCccceehhHHHHHHHHHhCCCCCC
Q 010131 352 THI------SSVARGTVGYLDPEYYGN--QQLTEKSDVYSFGVVLLELISGKKPVS 399 (517)
Q Consensus 352 ~~~------~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~slG~~l~elltg~~p~~ 399 (517)
... .....||+.|+|||++.. ..|+..+|+|+..+-..+-+.++.+|.
T Consensus 484 ~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY~ 539 (540)
T 3en9_A 484 DKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARYV 539 (540)
T ss_dssp HHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCCC
T ss_pred ccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccC
Confidence 221 234568999999999976 567888999999999888888877764
No 253
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.90 E-value=1.8e-24 Score=207.74 Aligned_cols=141 Identities=15% Similarity=0.113 Sum_probs=116.3
Q ss_pred hhcccCCCCceEEEEEEecCCcEEEEEEecCCCc------------------hhHHHHHHHHHHHhcCCCCCccccceee
Q 010131 199 FCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS------------------HRTQQFVTEVALLSRIHHRNLVPLIGYC 260 (517)
Q Consensus 199 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~h~niv~~~~~~ 260 (517)
+.+.||+|+||.||+|.+.+|+.||||+++.... .....+.+|+.++++++ | +++.+++
T Consensus 94 ~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~ 170 (282)
T 1zar_A 94 IGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVY 170 (282)
T ss_dssp EEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEE
T ss_pred ecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEE
Confidence 3588999999999999997799999999864321 13456899999999999 5 7777766
Q ss_pred ecCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEcc
Q 010131 261 EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSD 340 (517)
Q Consensus 261 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~D 340 (517)
.. +..++||||+++++|.+ +.. .....++.|++.||.|||+ .+|+||||||+|||++ ++.+||+|
T Consensus 171 ~~-~~~~lvmE~~~g~~L~~-l~~---------~~~~~i~~qi~~~l~~lH~---~giiHrDlkp~NILl~-~~~vkl~D 235 (282)
T 1zar_A 171 AW-EGNAVLMELIDAKELYR-VRV---------ENPDEVLDMILEEVAKFYH---RGIVHGDLSQYNVLVS-EEGIWIID 235 (282)
T ss_dssp EE-ETTEEEEECCCCEEGGG-CCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEE-TTEEEECC
T ss_pred ec-cceEEEEEecCCCcHHH-cch---------hhHHHHHHHHHHHHHHHHH---CCCEeCCCCHHHEEEE-CCcEEEEE
Confidence 44 55699999999999988 431 1345799999999999999 9999999999999999 99999999
Q ss_pred ccCccccCCCCcccccccccCCCCcCCCccC
Q 010131 341 FGLSRQAEEDLTHISSVARGTVGYLDPEYYG 371 (517)
Q Consensus 341 fg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~ 371 (517)
||+++. +..+.|||++.
T Consensus 236 FG~a~~--------------~~~~~a~e~l~ 252 (282)
T 1zar_A 236 FPQSVE--------------VGEEGWREILE 252 (282)
T ss_dssp CTTCEE--------------TTSTTHHHHHH
T ss_pred CCCCeE--------------CCCCCHHHHHH
Confidence 999863 34578888764
No 254
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.81 E-value=3.6e-20 Score=175.62 Aligned_cols=135 Identities=23% Similarity=0.246 Sum_probs=105.2
Q ss_pred hhhcccCCCCceEEEEEEe-cCCcE--EEEEEecCCCch------------------------hHHHHHHHHHHHhcCCC
Q 010131 198 NFCKKIGKGSFGSVYYGKM-KDGKE--VAVKIMADSCSH------------------------RTQQFVTEVALLSRIHH 250 (517)
Q Consensus 198 ~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~h 250 (517)
.+.+.||+|+||.||+|.+ .+|+. ||||+++..... ....+.+|+.++.+++|
T Consensus 50 ~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~ 129 (258)
T 1zth_A 50 AMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKE 129 (258)
T ss_dssp EEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHh
Confidence 3567899999999999998 67989 999987543111 11367899999999988
Q ss_pred CCc--cccceeeecCCeeEEEEEecCC-C----CHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHh-cCCCCCcEecC
Q 010131 251 RNL--VPLIGYCEEEHQRILVYEYMHN-G----TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLH-TGCNPGIIHRD 322 (517)
Q Consensus 251 ~ni--v~~~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH-~~~~~~ivH~d 322 (517)
+++ ..++++ +..++||||+.+ | +|.++... .++..+..++.|++.||.||| + .+|+|||
T Consensus 130 ~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~------~~~~~~~~i~~qi~~~l~~lH~~---~givHrD 196 (258)
T 1zth_A 130 AGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE------LKELDVEGIFNDVVENVKRLYQE---AELVHAD 196 (258)
T ss_dssp TTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG------GGGSCHHHHHHHHHHHHHHHHHT---SCEECSS
T ss_pred CCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc------cChHHHHHHHHHHHHHHHHHHHH---CCEEeCC
Confidence 764 333332 356899999942 4 66665432 234567889999999999999 8 9999999
Q ss_pred CCCCCeEeCCCCcEEEccccCcccc
Q 010131 323 VKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 323 lk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
|||+|||++. .++|+|||++...
T Consensus 197 lkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 197 LSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp CSTTSEEESS--SEEECCCTTCEET
T ss_pred CCHHHEEEcC--cEEEEECcccccC
Confidence 9999999998 9999999999765
No 255
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.70 E-value=1.1e-17 Score=164.82 Aligned_cols=138 Identities=16% Similarity=0.153 Sum_probs=98.9
Q ss_pred HhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCc--------------hhHHH--------HHHHHHHHhcCCCCCcc
Q 010131 197 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCS--------------HRTQQ--------FVTEVALLSRIHHRNLV 254 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~--------------~~~~~--------~~~E~~~l~~l~h~niv 254 (517)
|.+.+.||+|++|.||+|...+|+.||||+++.... ..... ..+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 456788999999999999999999999999753210 00111 23456666666444332
Q ss_pred ccceeeecCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCC
Q 010131 255 PLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINM 334 (517)
Q Consensus 255 ~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~ 334 (517)
-..-+.. ...++||||++|++|..+... .....++.|++.+|.|||+ .|||||||||.|||+++++
T Consensus 177 vp~p~~~--~~~~LVME~i~G~~L~~l~~~---------~~~~~l~~qll~~l~~lH~---~gIVHrDLKp~NILl~~dg 242 (397)
T 4gyi_A 177 VPEPIAQ--SRHTIVMSLVDALPMRQVSSV---------PDPASLYADLIALILRLAK---HGLIHGDFNEFNILIREEK 242 (397)
T ss_dssp CCCEEEE--ETTEEEEECCSCEEGGGCCCC---------SCHHHHHHHHHHHHHHHHH---TTEECSCCSTTSEEEEEEE
T ss_pred CCeeeec--cCceEEEEecCCccHhhhccc---------HHHHHHHHHHHHHHHHHHH---CCCcCCCCCHHHEEEeCCC
Confidence 1111111 234799999999888765421 1245678999999999999 9999999999999998776
Q ss_pred ----------cEEEccccCccccC
Q 010131 335 ----------RAKVSDFGLSRQAE 348 (517)
Q Consensus 335 ----------~~kl~Dfg~a~~~~ 348 (517)
.+.|+||+.+....
T Consensus 243 d~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 243 DAEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp CSSCTTSEEEEEEECCCTTCEETT
T ss_pred CcccccccccceEEEEeCCcccCC
Confidence 38999999876543
No 256
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.59 E-value=7.1e-16 Score=168.95 Aligned_cols=108 Identities=34% Similarity=0.454 Sum_probs=100.2
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+++|.+|..|+++++|+.|+|++|+|+|.+|+ |+++++|+.|+|++|+++|.+|..++.+++|+.|++++
T Consensus 634 L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~ 713 (768)
T 3rgz_A 634 MMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSN 713 (768)
T ss_dssp CCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCS
T ss_pred ccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcC
Confidence 57899999999999999999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred ccccCCCCccc-cccceeeeccCCCccccc
Q 010131 80 NSFVGEIPPAL-LTGKVIFKYDNNPKLHKE 108 (517)
Q Consensus 80 N~l~~~~P~~~-~~~~~~~~~~~n~~~~~~ 108 (517)
|+++|.+|... +......++.|||++|+.
T Consensus 714 N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 714 NNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743 (768)
T ss_dssp SEEEEECCSSSSGGGSCGGGGCSCTEEEST
T ss_pred CcccccCCCchhhccCCHHHhcCCchhcCC
Confidence 99999999753 344556779999999974
No 257
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.53 E-value=1.8e-14 Score=129.93 Aligned_cols=106 Identities=22% Similarity=0.281 Sum_probs=95.6
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|+|+ .+|..|.++++|+.|+|++|.|++.++. |.++++|+.|+|++|+|++..|..|..+++|+.|++++
T Consensus 33 l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~ 111 (193)
T 2wfh_A 33 VTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHG 111 (193)
T ss_dssp CCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCC
Confidence 678999999999 8999999999999999999999999887 99999999999999999977777899999999999999
Q ss_pred ccccCCCCccccc---cceeeeccCCCccccc
Q 010131 80 NSFVGEIPPALLT---GKVIFKYDNNPKLHKE 108 (517)
Q Consensus 80 N~l~~~~P~~~~~---~~~~~~~~~n~~~~~~ 108 (517)
|+|+ .+|+..+. .+..+.+.+||+.|..
T Consensus 112 N~l~-~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 112 NDIS-VVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp SCCC-BCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CCCC-eeChhhhhcCccccEEEeCCCCeecCC
Confidence 9999 67776433 5667889999999863
No 258
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.51 E-value=3e-14 Score=128.37 Aligned_cols=107 Identities=18% Similarity=0.204 Sum_probs=94.7
Q ss_pred CceecCCCCcccccCCc-cccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPP-ELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~-~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
|++|+|++|+|++..|. .|..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..+..+++|+.|+++
T Consensus 31 l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 110 (192)
T 1w8a_A 31 TTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLY 110 (192)
T ss_dssp CSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECC
T ss_pred CCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECC
Confidence 57899999999966554 388999999999999999999887 9999999999999999998888889999999999999
Q ss_pred cccccCCCCccccc--cceeeeccCCCcccc
Q 010131 79 NNSFVGEIPPALLT--GKVIFKYDNNPKLHK 107 (517)
Q Consensus 79 ~N~l~~~~P~~~~~--~~~~~~~~~n~~~~~ 107 (517)
+|++++..|..+.. .+..+.+.+|++.|.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 111 DNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp SSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 99999777766543 567788999999876
No 259
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.50 E-value=3.6e-14 Score=130.81 Aligned_cols=107 Identities=17% Similarity=0.175 Sum_probs=90.2
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|.|++.+|. |..+++|+.|+|++|+|++..|..+..+++|+.|++++
T Consensus 59 L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 138 (220)
T 2v70_A 59 LRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYD 138 (220)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTT
T ss_pred CCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCC
Confidence 57888999999877777888899999999999999988887 88899999999999999977788899999999999999
Q ss_pred ccccCCCCccccc--cceeeeccCCCcccc
Q 010131 80 NSFVGEIPPALLT--GKVIFKYDNNPKLHK 107 (517)
Q Consensus 80 N~l~~~~P~~~~~--~~~~~~~~~n~~~~~ 107 (517)
|++++..|..+.. .+..+.+.+|++.|.
T Consensus 139 N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 139 NQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 9999655655533 456778899998886
No 260
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.50 E-value=4.9e-14 Score=129.91 Aligned_cols=107 Identities=21% Similarity=0.281 Sum_probs=85.5
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|.|+..++. |..+++|+.|+|++|++++..|..|..+++|+.|++++
T Consensus 58 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 137 (220)
T 2v9t_B 58 LRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYD 137 (220)
T ss_dssp CCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCC
Confidence 57788888888877788888888888888888888877776 78888888888888888877777888888888889999
Q ss_pred ccccCCCCcccc---ccceeeeccCCCccccc
Q 010131 80 NSFVGEIPPALL---TGKVIFKYDNNPKLHKE 108 (517)
Q Consensus 80 N~l~~~~P~~~~---~~~~~~~~~~n~~~~~~ 108 (517)
|+|+ .+|+..+ ..+..+.+.+||+.|..
T Consensus 138 N~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~c 168 (220)
T 2v9t_B 138 NKLQ-TIAKGTFSPLRAIQTMHLAQNPFICDC 168 (220)
T ss_dssp SCCS-CCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred CcCC-EECHHHHhCCCCCCEEEeCCCCcCCCC
Confidence 9888 4555432 24566778899988863
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.44 E-value=2.3e-13 Score=126.25 Aligned_cols=87 Identities=24% Similarity=0.304 Sum_probs=42.3
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+..+++|+.|++++
T Consensus 42 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~ 121 (229)
T 3e6j_A 42 AQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCC 121 (229)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccC
Confidence 34555555555544454555555555555555555444443 44555555555555555533233344444444444444
Q ss_pred ccccCCCCc
Q 010131 80 NSFVGEIPP 88 (517)
Q Consensus 80 N~l~~~~P~ 88 (517)
|+|+ .+|.
T Consensus 122 N~l~-~lp~ 129 (229)
T 3e6j_A 122 NKLT-ELPR 129 (229)
T ss_dssp SCCC-SCCT
T ss_pred Cccc-ccCc
Confidence 4444 4443
No 262
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.43 E-value=3.8e-13 Score=119.38 Aligned_cols=106 Identities=22% Similarity=0.284 Sum_probs=91.7
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++..+..|..+++|+.|+|++|.|++.++. |..+++|+.|+|++|++++..+..+..+++|+.|++++
T Consensus 30 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 109 (177)
T 2o6r_A 30 ATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDT 109 (177)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcC
Confidence 67899999999966566788999999999999999998887 89999999999999999966666688999999999999
Q ss_pred ccccCCCCcccc---ccceeeeccCCCcccc
Q 010131 80 NSFVGEIPPALL---TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 80 N~l~~~~P~~~~---~~~~~~~~~~n~~~~~ 107 (517)
|+++ .+|+..+ ..+..+.+.+|++.|.
T Consensus 110 N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~ 139 (177)
T 2o6r_A 110 NQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 139 (177)
T ss_dssp SCCS-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred Ccce-EeCHHHhcCCcccCEEEecCCCeecc
Confidence 9999 6777653 3556788899998875
No 263
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.43 E-value=3.6e-13 Score=118.69 Aligned_cols=102 Identities=26% Similarity=0.346 Sum_probs=88.8
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
+.|++++|+++ .+|..+. ++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..|..|..+++|+.|++++|
T Consensus 12 ~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 67999999999 6898774 8999999999999999887 999999999999999999555556789999999999999
Q ss_pred cccCCCCcccc---ccceeeeccCCCcccc
Q 010131 81 SFVGEIPPALL---TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 81 ~l~~~~P~~~~---~~~~~~~~~~n~~~~~ 107 (517)
+|+ .+|+..+ ..+..+.+.+|++.|.
T Consensus 89 ~l~-~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 89 QLK-SIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CCC-CCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred ccC-EeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 999 5776533 3567788999999886
No 264
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.41 E-value=9.3e-14 Score=135.37 Aligned_cols=108 Identities=27% Similarity=0.305 Sum_probs=95.7
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++.+|..|..+++|+.|+|++|.+++.+|.+..+++|+.|+|++|+++|.+|..+..+++|+.|++++|
T Consensus 199 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N 278 (313)
T 1ogq_A 199 LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFN 278 (313)
T ss_dssp CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSS
T ss_pred ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCC
Confidence 57888999999988888899999999999999999998888889999999999999999999999999999999999999
Q ss_pred cccCCCCccc-cccceeeeccCCCccccc
Q 010131 81 SFVGEIPPAL-LTGKVIFKYDNNPKLHKE 108 (517)
Q Consensus 81 ~l~~~~P~~~-~~~~~~~~~~~n~~~~~~ 108 (517)
+++|.+|... ......+.+.+|+++|+.
T Consensus 279 ~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 279 NLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp EEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred cccccCCCCccccccChHHhcCCCCccCC
Confidence 9999999762 234566788999999974
No 265
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=6.3e-13 Score=117.56 Aligned_cols=102 Identities=22% Similarity=0.352 Sum_probs=87.9
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
+.+++++|+++ .+|..+. ++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..+..|..+++|+.|++++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 47899999997 8998775 8999999999999999887 999999999999999999544445789999999999999
Q ss_pred cccCCCCcccc---ccceeeeccCCCcccc
Q 010131 81 SFVGEIPPALL---TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 81 ~l~~~~P~~~~---~~~~~~~~~~n~~~~~ 107 (517)
+|+ .+|+..+ ..+..+.+.+|++.|.
T Consensus 92 ~l~-~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 92 HLK-SIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp CCC-CCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred ccc-eeCHHHhccccCCCEEEeCCCCcccc
Confidence 999 6777633 3566788999999876
No 266
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.40 E-value=5.7e-13 Score=128.18 Aligned_cols=105 Identities=29% Similarity=0.370 Sum_probs=66.9
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCC-CCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~-~~~~l~~L~~l~l~ 78 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|+ .+|. .+..+++|+.|+++
T Consensus 102 L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~L~ 180 (290)
T 1p9a_G 102 LTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT-ELPAGLLNGLENLDTLLLQ 180 (290)
T ss_dssp CCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-CCCTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-ccCHHHhcCcCCCCEEECC
Confidence 45566666666644445566666666666666666666555 566666666666666666 3343 34566677777777
Q ss_pred cccccCCCCccccc--cceeeeccCCCcccc
Q 010131 79 NNSFVGEIPPALLT--GKVIFKYDNNPKLHK 107 (517)
Q Consensus 79 ~N~l~~~~P~~~~~--~~~~~~~~~n~~~~~ 107 (517)
+|+++ .+|..++. .+..+.+.+|||.|.
T Consensus 181 ~N~l~-~ip~~~~~~~~L~~l~L~~Np~~C~ 210 (290)
T 1p9a_G 181 ENSLY-TIPKGFFGSHLLPFAFLHGNPWLCN 210 (290)
T ss_dssp SSCCC-CCCTTTTTTCCCSEEECCSCCBCCS
T ss_pred CCcCC-ccChhhcccccCCeEEeCCCCccCc
Confidence 77776 56665544 245566788888876
No 267
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.39 E-value=6.7e-13 Score=117.39 Aligned_cols=89 Identities=19% Similarity=0.250 Sum_probs=80.0
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..+..+..+++|+.|++++
T Consensus 35 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~ 114 (174)
T 2r9u_A 35 KQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYN 114 (174)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCS
T ss_pred CcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCC
Confidence 68899999999988888999999999999999999998887 89999999999999999954444599999999999999
Q ss_pred ccccCCCCccc
Q 010131 80 NSFVGEIPPAL 90 (517)
Q Consensus 80 N~l~~~~P~~~ 90 (517)
|.+. ..|..+
T Consensus 115 N~~~-c~~~~~ 124 (174)
T 2r9u_A 115 NPWD-CECRDI 124 (174)
T ss_dssp SCBC-TTBGGG
T ss_pred CCcc-cccccH
Confidence 9999 666543
No 268
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.38 E-value=7.4e-13 Score=116.68 Aligned_cols=87 Identities=22% Similarity=0.218 Sum_probs=79.3
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..|..+..+++|+.|++++
T Consensus 32 l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 111 (170)
T 3g39_A 32 TQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLN 111 (170)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCC
Confidence 57899999999988788999999999999999999999888 89999999999999999965555699999999999999
Q ss_pred ccccCCCCc
Q 010131 80 NSFVGEIPP 88 (517)
Q Consensus 80 N~l~~~~P~ 88 (517)
|+++ ..++
T Consensus 112 N~~~-c~c~ 119 (170)
T 3g39_A 112 NPWD-CACS 119 (170)
T ss_dssp SCBC-TTBG
T ss_pred CCCC-CCch
Confidence 9999 4554
No 269
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.38 E-value=4.8e-13 Score=120.44 Aligned_cols=87 Identities=21% Similarity=0.325 Sum_probs=82.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..|..+..+++|+.|++++
T Consensus 56 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 135 (192)
T 1w8a_A 56 LVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLAS 135 (192)
T ss_dssp CCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTT
T ss_pred CCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCC
Confidence 68999999999998899999999999999999999999998 99999999999999999999999999999999999999
Q ss_pred ccccCCCC
Q 010131 80 NSFVGEIP 87 (517)
Q Consensus 80 N~l~~~~P 87 (517)
|++++..+
T Consensus 136 N~l~c~c~ 143 (192)
T 1w8a_A 136 NPFNCNCH 143 (192)
T ss_dssp CCBCCSGG
T ss_pred CCccCcCc
Confidence 99997655
No 270
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.37 E-value=1.3e-12 Score=122.88 Aligned_cols=105 Identities=21% Similarity=0.255 Sum_probs=50.6
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
+.|+|++|++++..|..|..+++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..|..+..+++|+.|++++|
T Consensus 86 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 165 (251)
T 3m19_A 86 GTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTN 165 (251)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCC
Confidence 4444444444433333344455555555555555544444 455555555555555555333334555555555555555
Q ss_pred cccCCCCcc-cc--ccceeeeccCCCcccc
Q 010131 81 SFVGEIPPA-LL--TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 81 ~l~~~~P~~-~~--~~~~~~~~~~n~~~~~ 107 (517)
+++ .+|+. +. ..+..+.+.+|++.|.
T Consensus 166 ~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 166 QLQ-SVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CCS-CCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCC-ccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 555 23332 21 1334455566665553
No 271
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.37 E-value=1.1e-13 Score=143.32 Aligned_cols=29 Identities=10% Similarity=0.015 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHhcCCCCCccccceeeecC
Q 010131 235 TQQFVTEVALLSRIHHRNLVPLIGYCEEE 263 (517)
Q Consensus 235 ~~~~~~E~~~l~~l~h~niv~~~~~~~~~ 263 (517)
.++|..|++.+.+++|+|+|+++|||...
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~ 351 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTV 351 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcCh
Confidence 46799999999999999999999999764
No 272
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.36 E-value=1.8e-12 Score=120.14 Aligned_cols=106 Identities=24% Similarity=0.235 Sum_probs=92.9
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..+..|..+++|+.|+|++|+|++.++. |..+++|+.|+|++|+|+ .+|..+..+++|+.|++++
T Consensus 66 L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~ 144 (229)
T 3e6j_A 66 LKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQ 144 (229)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCS
T ss_pred CcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCC
Confidence 68999999999854445678999999999999999998887 899999999999999999 9999999999999999999
Q ss_pred ccccCCCCcccc---ccceeeeccCCCccccc
Q 010131 80 NSFVGEIPPALL---TGKVIFKYDNNPKLHKE 108 (517)
Q Consensus 80 N~l~~~~P~~~~---~~~~~~~~~~n~~~~~~ 108 (517)
|+|+ .+|+..+ ..+..+.+.+||+.|..
T Consensus 145 N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 145 NQLK-SIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred CcCC-ccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 9999 6776543 35567889999998863
No 273
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.35 E-value=2.3e-12 Score=117.52 Aligned_cols=83 Identities=24% Similarity=0.339 Sum_probs=44.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..+..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|++++..+..+..+++|+.|++++
T Consensus 30 l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 109 (208)
T 2o6s_A 30 TTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNT 109 (208)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCC
Confidence 34555566655543333445555555555555555555444 45555555555555555533333345555555555555
Q ss_pred cccc
Q 010131 80 NSFV 83 (517)
Q Consensus 80 N~l~ 83 (517)
|+++
T Consensus 110 N~l~ 113 (208)
T 2o6s_A 110 NQLQ 113 (208)
T ss_dssp SCCC
T ss_pred CcCc
Confidence 5555
No 274
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.33 E-value=1.6e-12 Score=128.43 Aligned_cols=102 Identities=20% Similarity=0.223 Sum_probs=91.7
Q ss_pred eecCCCC-cccccCCccccCCCCCcEEEcCC-CCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 3 RCALSGK-NLKGEIPPELKNMEALTELWLDG-NFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 3 ~L~l~~n-~~~~~~p~~~~~l~~L~~L~l~~-N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
.++++++ +++ .+|. |..+++|+.|+|++ |.|++.+|. |.+|++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 12 ~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 5788998 899 6998 99999999999996 999999987 99999999999999999988888899999999999999
Q ss_pred ccccCCCCcccccc--ceeeeccCCCcccc
Q 010131 80 NSFVGEIPPALLTG--KVIFKYDNNPKLHK 107 (517)
Q Consensus 80 N~l~~~~P~~~~~~--~~~~~~~~n~~~~~ 107 (517)
|+|+ .+|+..+.. +..+.+.+|++.|.
T Consensus 90 N~l~-~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 90 NALE-SLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SCCS-CCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred Cccc-eeCHHHcccCCceEEEeeCCCccCC
Confidence 9999 688776543 56778899999886
No 275
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.33 E-value=3.7e-12 Score=121.38 Aligned_cols=105 Identities=21% Similarity=0.239 Sum_probs=48.4
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
++|+|++|++++..|..|.++++|+.|+|++|.+++.++. |..+++|+.|++++|++++..|..+..+++|+.|++++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 4444444444433333344445555555555555544444 444555555555555555333333444555555555555
Q ss_pred cccCCCCccc---cccceeeeccCCCcccc
Q 010131 81 SFVGEIPPAL---LTGKVIFKYDNNPKLHK 107 (517)
Q Consensus 81 ~l~~~~P~~~---~~~~~~~~~~~n~~~~~ 107 (517)
++++ +|+.. ...+..+.+.+|++.|.
T Consensus 192 ~l~~-~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 192 QLKS-VPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CCSC-CCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCCc-cCHHHHhCCcCCCEEEccCCCcccc
Confidence 5553 22221 12334445555555543
No 276
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.32 E-value=4e-12 Score=120.94 Aligned_cols=106 Identities=24% Similarity=0.303 Sum_probs=71.0
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++..|..|..+++|+.|+|++|.|++.++. |..+++|+.|+|++|++++..+..+..+++|+.|++++
T Consensus 111 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 190 (270)
T 2o6q_A 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDN 190 (270)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCC
Confidence 45666666666655555566677777777777777766665 67777777777777777744444566777777777777
Q ss_pred ccccCCCCcccc---ccceeeeccCCCcccc
Q 010131 80 NSFVGEIPPALL---TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 80 N~l~~~~P~~~~---~~~~~~~~~~n~~~~~ 107 (517)
|+++ .+|+..+ ..+..+.+.+||+.|.
T Consensus 191 N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 191 NQLK-RVPEGAFDSLEKLKMLQLQENPWDCT 220 (270)
T ss_dssp SCCS-CCCTTTTTTCTTCCEEECCSSCBCCS
T ss_pred CcCC-cCCHHHhccccCCCEEEecCCCeeCC
Confidence 7777 4555432 2445667788888776
No 277
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.32 E-value=3.9e-12 Score=120.45 Aligned_cols=140 Identities=14% Similarity=0.072 Sum_probs=108.9
Q ss_pred HhhhcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-CCCccccceeeecCCeeEEEEEecCC
Q 010131 197 NNFCKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHN 275 (517)
Q Consensus 197 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~ 275 (517)
+.+...++.|+.+.||++... ++.+++|+...........+.+|+.+++.+. +..+.++++++.+.+..++||||++|
T Consensus 16 ~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G 94 (263)
T 3tm0_A 16 YRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADG 94 (263)
T ss_dssp SEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSS
T ss_pred ceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCC
Confidence 334566788888999999865 7899999986532223346889999999884 67788999999888899999999999
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------ 313 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~------------------------------------------ 313 (517)
.+|.+.+.. ......++.+++++|+.||+.
T Consensus 95 ~~l~~~~~~--------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (263)
T 3tm0_A 95 VLCSEEYED--------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKD 166 (263)
T ss_dssp EEHHHHCCT--------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSS
T ss_pred eehhhccCC--------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCC
Confidence 999876421 112347789999999999971
Q ss_pred --------------CCCCcEecCCCCCCeEeCCCCcEEEccccCcc
Q 010131 314 --------------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 345 (517)
Q Consensus 314 --------------~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 345 (517)
....++|||+++.||+++++..+.|+||+.+.
T Consensus 167 ~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 167 PRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 01458999999999999876666799999764
No 278
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.30 E-value=7.9e-13 Score=128.75 Aligned_cols=103 Identities=29% Similarity=0.605 Sum_probs=81.7
Q ss_pred CceecCCCCcccc--cCCccccCCCCCcEEEcCC-CCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccc
Q 010131 1 MARCALSGKNLKG--EIPPELKNMEALTELWLDG-NFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 76 (517)
Q Consensus 1 l~~L~l~~n~~~~--~~p~~~~~l~~L~~L~l~~-N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~ 76 (517)
|+.|+|++|+++| .+|..|+++++|+.|+|++ |.+++.+|. |..+++|++|+|++|++++.+|..+..+++|++|+
T Consensus 52 l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~ 131 (313)
T 1ogq_A 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLD 131 (313)
T ss_dssp EEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEE
T ss_pred EEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEe
Confidence 3578888888888 7888888888888888884 888888886 88888888888888888888888888888888888
Q ss_pred cccccccCCCCccccc--cceeeeccCCC
Q 010131 77 IENNSFVGEIPPALLT--GKVIFKYDNNP 103 (517)
Q Consensus 77 l~~N~l~~~~P~~~~~--~~~~~~~~~n~ 103 (517)
+++|++++.+|..+.. .+..+.+.+|.
T Consensus 132 Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~ 160 (313)
T 1ogq_A 132 FSYNALSGTLPPSISSLPNLVGITFDGNR 160 (313)
T ss_dssp CCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred CCCCccCCcCChHHhcCCCCCeEECcCCc
Confidence 8888888778776543 44556666664
No 279
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.30 E-value=4.5e-12 Score=116.66 Aligned_cols=103 Identities=21% Similarity=0.221 Sum_probs=85.9
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCC-CCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~-~~~l~~L~~l~l~ 78 (517)
|+.|+|++|+|++..|..|..+++|+.|+|++|+|++..|+ |.++++|+.|+|++|+|+ .+|.. +..+++|+.|+++
T Consensus 34 l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~ 112 (220)
T 2v9t_B 34 ITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKIT-ELPKSLFEGLFSLQLLLLN 112 (220)
T ss_dssp CCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCC-ccCHhHccCCCCCCEEECC
Confidence 57899999999977677899999999999999999999887 999999999999999999 55554 7889999999999
Q ss_pred cccccCCCCcccc--ccceeeeccCCCc
Q 010131 79 NNSFVGEIPPALL--TGKVIFKYDNNPK 104 (517)
Q Consensus 79 ~N~l~~~~P~~~~--~~~~~~~~~~n~~ 104 (517)
+|++++..|..+. ..+..+.+.+|.-
T Consensus 113 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l 140 (220)
T 2v9t_B 113 ANKINCLRVDAFQDLHNLNLLSLYDNKL 140 (220)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCCEeCHHHcCCCCCCCEEECCCCcC
Confidence 9999954454443 2455667777753
No 280
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.29 E-value=3e-12 Score=136.90 Aligned_cols=108 Identities=17% Similarity=0.173 Sum_probs=94.3
Q ss_pred CceecCCCCcccc-cCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
|+.|+|++|++.+ .+|..|..+++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..|..+..+++|+.|+++
T Consensus 471 L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls 550 (635)
T 4g8a_A 471 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYS 550 (635)
T ss_dssp CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCCEEECT
T ss_pred hhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCCEEECC
Confidence 5789999998554 5678899999999999999999999997 9999999999999999997777789999999999999
Q ss_pred cccccCCCCcccc---ccceeeeccCCCccccc
Q 010131 79 NNSFVGEIPPALL---TGKVIFKYDNNPKLHKE 108 (517)
Q Consensus 79 ~N~l~~~~P~~~~---~~~~~~~~~~n~~~~~~ 108 (517)
+|+|++..|..+. ..+..+.+.+||+.|..
T Consensus 551 ~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~C 583 (635)
T 4g8a_A 551 LNHIMTSKKQELQHFPSSLAFLNLTQNDFACTC 583 (635)
T ss_dssp TSCCCBCCSSCTTCCCTTCCEEECTTCCBCCSG
T ss_pred CCcCCCCCHHHHHhhhCcCCEEEeeCCCCcccC
Confidence 9999976665553 34667889999999974
No 281
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.27 E-value=3.1e-12 Score=140.05 Aligned_cols=102 Identities=26% Similarity=0.467 Sum_probs=93.6
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
..++++.|.++|.+|..++++++|+.|||++|+++|.+|. |++++.|+.|+|++|+++|.+|..++++++|+.||+++|
T Consensus 611 ~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N 690 (768)
T 3rgz_A 611 NPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSN 690 (768)
T ss_dssp CCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSS
T ss_pred cccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCC
Confidence 3467888999999999999999999999999999999998 999999999999999999999999999999999999999
Q ss_pred cccCCCCccccc--cceeeeccCCC
Q 010131 81 SFVGEIPPALLT--GKVIFKYDNNP 103 (517)
Q Consensus 81 ~l~~~~P~~~~~--~~~~~~~~~n~ 103 (517)
+++|.+|..+.. .+..+.+++|+
T Consensus 691 ~l~g~ip~~l~~l~~L~~L~ls~N~ 715 (768)
T 3rgz_A 691 KLDGRIPQAMSALTMLTEIDLSNNN 715 (768)
T ss_dssp CCEECCCGGGGGCCCCSEEECCSSE
T ss_pred cccCcCChHHhCCCCCCEEECcCCc
Confidence 999999988754 45667777775
No 282
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.26 E-value=2.8e-12 Score=110.21 Aligned_cols=101 Identities=20% Similarity=0.241 Sum_probs=87.1
Q ss_pred CceecCCCCccc-ccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|++++|+++ +.+|..+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|.+++.+|..+..+++|+.|++++
T Consensus 19 l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~ 97 (149)
T 2je0_A 19 VKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI-ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSG 97 (149)
T ss_dssp CSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC-TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTT
T ss_pred CeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc-hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCC
Confidence 688999999999 88999999999999999999999998 6699999999999999999977888888899999999999
Q ss_pred ccccCCCC--ccccc--cceeeeccCCC
Q 010131 80 NSFVGEIP--PALLT--GKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~~~P--~~~~~--~~~~~~~~~n~ 103 (517)
|++++ +| ..+.. ....+.+.+|+
T Consensus 98 N~i~~-~~~~~~~~~l~~L~~L~l~~N~ 124 (149)
T 2je0_A 98 NKIKD-LSTIEPLKKLENLKSLDLFNCE 124 (149)
T ss_dssp SCCCS-HHHHGGGGGCTTCCEEECTTCG
T ss_pred CcCCC-hHHHHHHhhCCCCCEEeCcCCc
Confidence 99994 44 44432 45566677775
No 283
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.26 E-value=1.3e-11 Score=116.15 Aligned_cols=88 Identities=23% Similarity=0.273 Sum_probs=51.9
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++..|..|.++++|+.|+|++|.|++.+|. |..+++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 37 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 116 (251)
T 3m19_A 37 TEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGG 116 (251)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCC
Confidence 35566666666655555566666666666666666665555 56666666666666666644444455566666666666
Q ss_pred ccccCCCCcc
Q 010131 80 NSFVGEIPPA 89 (517)
Q Consensus 80 N~l~~~~P~~ 89 (517)
|+++ .+|+.
T Consensus 117 N~l~-~~~~~ 125 (251)
T 3m19_A 117 NQLK-SLPSG 125 (251)
T ss_dssp SCCC-CCCTT
T ss_pred CcCC-CcChh
Confidence 6665 34443
No 284
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.26 E-value=7.9e-12 Score=128.23 Aligned_cols=106 Identities=21% Similarity=0.262 Sum_probs=84.0
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..|..|.++++|+.|+|++|.+++.+|. |..+++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 301 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 380 (455)
T 3v47_A 301 LEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDT 380 (455)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCC
Confidence 56788888888877777788888888888888888877776 78888888888888888877788888888888888888
Q ss_pred ccccCCCCcccc---ccceeeeccCCCcccc
Q 010131 80 NSFVGEIPPALL---TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 80 N~l~~~~P~~~~---~~~~~~~~~~n~~~~~ 107 (517)
|+++ .+|+..+ ..+..+.+.+|+..|.
T Consensus 381 N~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~ 410 (455)
T 3v47_A 381 NQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 410 (455)
T ss_dssp SCCS-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred Cccc-cCCHhHhccCCcccEEEccCCCcccC
Confidence 8888 5666443 2456677888888775
No 285
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.25 E-value=4e-12 Score=111.69 Aligned_cols=101 Identities=22% Similarity=0.236 Sum_probs=86.5
Q ss_pred CceecCCCCccc-ccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLK-GEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~-~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+++ +.+|..+..+++|+.|+|++|.+++. +.+..+++|+.|+|++|++++.+|..+..+++|+.|++++
T Consensus 26 L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 104 (168)
T 2ell_A 26 VRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV-SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSG 104 (168)
T ss_dssp CSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC-SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBS
T ss_pred CCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh-hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccC
Confidence 688999999998 88999899999999999999999988 6699999999999999999977888787899999999999
Q ss_pred ccccCCCC--ccccc--cceeeeccCCC
Q 010131 80 NSFVGEIP--PALLT--GKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~~~P--~~~~~--~~~~~~~~~n~ 103 (517)
|+++ .+| ..+.. .+..+.+.+|+
T Consensus 105 N~l~-~~~~~~~l~~l~~L~~L~l~~N~ 131 (168)
T 2ell_A 105 NKLK-DISTLEPLKKLECLKSLDLFNCE 131 (168)
T ss_dssp SSCC-SSGGGGGGSSCSCCCEEECCSSG
T ss_pred CccC-cchhHHHHhcCCCCCEEEeeCCc
Confidence 9999 565 33322 44556667775
No 286
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.25 E-value=7e-12 Score=115.40 Aligned_cols=87 Identities=24% Similarity=0.305 Sum_probs=80.5
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..|..|.++++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..|..+..+++|+.|++++
T Consensus 83 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 162 (220)
T 2v70_A 83 VNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLA 162 (220)
T ss_dssp CCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecC
Confidence 68999999999977777799999999999999999999887 99999999999999999988899999999999999999
Q ss_pred ccccCCCC
Q 010131 80 NSFVGEIP 87 (517)
Q Consensus 80 N~l~~~~P 87 (517)
|.+++..+
T Consensus 163 N~l~c~c~ 170 (220)
T 2v70_A 163 NPFNCNCY 170 (220)
T ss_dssp CCEECSGG
T ss_pred cCCcCCCc
Confidence 99996544
No 287
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.25 E-value=3.7e-12 Score=126.63 Aligned_cols=89 Identities=22% Similarity=0.185 Sum_probs=75.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.++. |..+++|+.|+|++|+|++..|..|..+++|+.|+|++
T Consensus 66 L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~ 145 (361)
T 2xot_A 66 LHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQ 145 (361)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred cCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCC
Confidence 67889999999976677788899999999999999888886 88889999999999998877778888888888888888
Q ss_pred ccccCCCCccc
Q 010131 80 NSFVGEIPPAL 90 (517)
Q Consensus 80 N~l~~~~P~~~ 90 (517)
|+|+ .+|...
T Consensus 146 N~l~-~l~~~~ 155 (361)
T 2xot_A 146 NQIS-RFPVEL 155 (361)
T ss_dssp SCCC-SCCGGG
T ss_pred CcCC-eeCHHH
Confidence 8888 577654
No 288
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.25 E-value=5.3e-12 Score=123.69 Aligned_cols=102 Identities=16% Similarity=0.232 Sum_probs=66.3
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|+++ .+|..++++++|+.|+|++|.+++.++.+..+++|+.|+|++|.+.+.+|..++.+++|+.|++++|
T Consensus 185 L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n 263 (328)
T 4fcg_A 185 LQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDC 263 (328)
T ss_dssp CCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTC
T ss_pred CCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCC
Confidence 456666666666 6666666667777777777777765555666677777777776666667766667777777777776
Q ss_pred cccCCCCccccc--cceeeeccCCC
Q 010131 81 SFVGEIPPALLT--GKVIFKYDNNP 103 (517)
Q Consensus 81 ~l~~~~P~~~~~--~~~~~~~~~n~ 103 (517)
++.+.+|..+.. .+..+.+.+|+
T Consensus 264 ~~~~~~p~~~~~l~~L~~L~L~~n~ 288 (328)
T 4fcg_A 264 SNLLTLPLDIHRLTQLEKLDLRGCV 288 (328)
T ss_dssp TTCCBCCTTGGGCTTCCEEECTTCT
T ss_pred CchhhcchhhhcCCCCCEEeCCCCC
Confidence 666666665432 33445555554
No 289
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.24 E-value=8.4e-12 Score=119.70 Aligned_cols=105 Identities=20% Similarity=0.287 Sum_probs=50.4
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
++|+|++|++++..+..|.++++|+.|+|++|.+++.++. |..+++|+.|+|++|.+++..|..+..+++|+.|++++|
T Consensus 132 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 211 (285)
T 1ozn_A 132 QYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFAN 211 (285)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCC
Confidence 4444444444433333344444555555555555444443 444555555555555555444555555555555555555
Q ss_pred cccCCCCcc-cc--ccceeeeccCCCcccc
Q 010131 81 SFVGEIPPA-LL--TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 81 ~l~~~~P~~-~~--~~~~~~~~~~n~~~~~ 107 (517)
++++ +|+. +. ..+..+.+.+|++.|.
T Consensus 212 ~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~ 240 (285)
T 1ozn_A 212 NLSA-LPTEALAPLRALQYLRLNDNPWVCD 240 (285)
T ss_dssp CCSC-CCHHHHTTCTTCCEEECCSSCEECS
T ss_pred cCCc-CCHHHcccCcccCEEeccCCCccCC
Confidence 5552 3332 11 1334455566665554
No 290
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.24 E-value=2.1e-11 Score=111.14 Aligned_cols=106 Identities=21% Similarity=0.282 Sum_probs=89.7
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..+..|.++++|+.|+|++|.|++.++. |..+++|+.|+|++|++++..+..+..+++|+.|++++
T Consensus 54 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 133 (208)
T 2o6s_A 54 LTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQ 133 (208)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCC
Confidence 68999999999965555678999999999999999998887 89999999999999999966556688999999999999
Q ss_pred ccccCCCCcccc---ccceeeeccCCCcccc
Q 010131 80 NSFVGEIPPALL---TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 80 N~l~~~~P~~~~---~~~~~~~~~~n~~~~~ 107 (517)
|+++ .+|+..+ ..+..+.+.+|++.|.
T Consensus 134 N~l~-~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 134 NQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp SCCS-CCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred Cccc-eeCHHHhccCCCccEEEecCCCeecC
Confidence 9999 5666533 3566778899988764
No 291
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.24 E-value=7.7e-12 Score=122.52 Aligned_cols=91 Identities=18% Similarity=0.265 Sum_probs=86.2
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+++ .+|+.++.+++|+.|+|++|.+.+.+|. +..+++|+.|+|++|.+.+.+|..+..+++|+.|++++
T Consensus 208 L~~L~L~~N~l~-~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~ 286 (328)
T 4fcg_A 208 LKSLKIRNSPLS-ALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRG 286 (328)
T ss_dssp CCEEEEESSCCC-CCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTT
T ss_pred CCEEEccCCCCC-cCchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCC
Confidence 689999999999 5888899999999999999999999998 99999999999999999999999999999999999999
Q ss_pred ccccCCCCccccc
Q 010131 80 NSFVGEIPPALLT 92 (517)
Q Consensus 80 N~l~~~~P~~~~~ 92 (517)
|++.+.+|..+..
T Consensus 287 n~~~~~iP~~l~~ 299 (328)
T 4fcg_A 287 CVNLSRLPSLIAQ 299 (328)
T ss_dssp CTTCCCCCGGGGG
T ss_pred CCchhhccHHHhh
Confidence 9999999988765
No 292
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.24 E-value=1.2e-11 Score=126.37 Aligned_cols=105 Identities=25% Similarity=0.334 Sum_probs=91.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+++ .+| .+..+++|+.|+|++|.|++..|. |.++++|+.|+|++|++++..|..|..+++|+.|+|++
T Consensus 187 L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 264 (440)
T 3zyj_A 187 LRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAH 264 (440)
T ss_dssp CCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTT
T ss_pred cCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCC
Confidence 678899999988 667 488899999999999999998887 99999999999999999988888899999999999999
Q ss_pred ccccCCCCccccc---cceeeeccCCCccccc
Q 010131 80 NSFVGEIPPALLT---GKVIFKYDNNPKLHKE 108 (517)
Q Consensus 80 N~l~~~~P~~~~~---~~~~~~~~~n~~~~~~ 108 (517)
|+++ .+|...+. .+..+.+.+||+.|..
T Consensus 265 N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC 295 (440)
T 3zyj_A 265 NNLT-LLPHDLFTPLHHLERIHLHHNPWNCNC 295 (440)
T ss_dssp SCCC-CCCTTTTSSCTTCCEEECCSSCEECSS
T ss_pred CCCC-ccChhHhccccCCCEEEcCCCCccCCC
Confidence 9999 67766543 5567889999999974
No 293
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.23 E-value=1.4e-11 Score=122.47 Aligned_cols=103 Identities=22% Similarity=0.132 Sum_probs=77.4
Q ss_pred CceecCCCCcccccCCcccc-CCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
++.|+|++|+|++..+..|. ++++|+.|+|++|+|++.+|. |.++++|+.|+|++|+|++..+..|..+++|+.|+|+
T Consensus 41 l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 120 (361)
T 2xot_A 41 TALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLY 120 (361)
T ss_dssp CSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECC
Confidence 46788888888866666666 788888888888888888876 8888888888888888886666668888888888888
Q ss_pred cccccCCCCcccc--ccceeeeccCCC
Q 010131 79 NNSFVGEIPPALL--TGKVIFKYDNNP 103 (517)
Q Consensus 79 ~N~l~~~~P~~~~--~~~~~~~~~~n~ 103 (517)
+|++++..|..+. ..+..+.+.+|.
T Consensus 121 ~N~i~~~~~~~~~~l~~L~~L~L~~N~ 147 (361)
T 2xot_A 121 NNHIVVVDRNAFEDMAQLQKLYLSQNQ 147 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCcccEECHHHhCCcccCCEEECCCCc
Confidence 8888844344432 234455566653
No 294
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.23 E-value=9.9e-12 Score=120.49 Aligned_cols=107 Identities=17% Similarity=0.178 Sum_probs=63.0
Q ss_pred CceecCCCCcccc-cCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKG-EIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~-~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
|++|+|++|.+++ .+|..+..+++|+.|+|++|.+++.+|. |..+++|+.|+|++|.+++..+..+..+++|+.|+++
T Consensus 152 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 231 (306)
T 2z66_A 152 LEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYS 231 (306)
T ss_dssp CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECT
T ss_pred CCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECC
Confidence 4556666666654 3555566666666666666666666554 6666666666666666664444455666666666666
Q ss_pred cccccCCCCccccc---cceeeeccCCCcccc
Q 010131 79 NNSFVGEIPPALLT---GKVIFKYDNNPKLHK 107 (517)
Q Consensus 79 ~N~l~~~~P~~~~~---~~~~~~~~~n~~~~~ 107 (517)
+|++++..|..+.. ....+.+.+|++.|.
T Consensus 232 ~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 232 LNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp TSCCCBCSSSSCCCCCTTCCEEECTTCCEECS
T ss_pred CCCCcccCHHHHHhhhccCCEEEccCCCeecc
Confidence 66666555544332 344556666666654
No 295
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.23 E-value=1.2e-11 Score=111.21 Aligned_cols=84 Identities=24% Similarity=0.270 Sum_probs=76.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..+..+..+++|+.|++++
T Consensus 56 L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 135 (193)
T 2wfh_A 56 LTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGA 135 (193)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCC
Confidence 68999999999977778899999999999999999999997 99999999999999999954445688999999999999
Q ss_pred ccccC
Q 010131 80 NSFVG 84 (517)
Q Consensus 80 N~l~~ 84 (517)
|.+..
T Consensus 136 N~~~C 140 (193)
T 2wfh_A 136 NPLYC 140 (193)
T ss_dssp SCEEC
T ss_pred CCeec
Confidence 99983
No 296
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.23 E-value=2.2e-11 Score=117.03 Aligned_cols=102 Identities=27% Similarity=0.338 Sum_probs=84.0
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+++ .+|..+..+++|+.|+|++|+|++.+|. |..+++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 79 L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 157 (290)
T 1p9a_G 79 LGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLAN 157 (290)
T ss_dssp CCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTT
T ss_pred CCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCC
Confidence 578888888888 7888888899999999999999988887 89999999999999999955555678899999999999
Q ss_pred ccccCCCCccccc---cceeeeccCCCc
Q 010131 80 NSFVGEIPPALLT---GKVIFKYDNNPK 104 (517)
Q Consensus 80 N~l~~~~P~~~~~---~~~~~~~~~n~~ 104 (517)
|+|+ .+|+..+. .+..+.+.+|.-
T Consensus 158 N~l~-~l~~~~~~~l~~L~~L~L~~N~l 184 (290)
T 1p9a_G 158 NNLT-ELPAGLLNGLENLDTLLLQENSL 184 (290)
T ss_dssp SCCS-CCCTTTTTTCTTCCEEECCSSCC
T ss_pred CcCC-ccCHHHhcCcCCCCEEECCCCcC
Confidence 9999 68876543 455666777753
No 297
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.22 E-value=1.4e-11 Score=109.28 Aligned_cols=87 Identities=21% Similarity=0.326 Sum_probs=76.6
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++..+..|.++++|+.|+|++|.|++.++. |..+++|+.|+|++|++++..+..+..+++|+.|++++
T Consensus 54 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 133 (177)
T 2o6r_A 54 LTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHT 133 (177)
T ss_dssp CSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCS
T ss_pred ccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecC
Confidence 68999999999965556688999999999999999999887 89999999999999999954444568899999999999
Q ss_pred ccccCCCC
Q 010131 80 NSFVGEIP 87 (517)
Q Consensus 80 N~l~~~~P 87 (517)
|++++..|
T Consensus 134 N~~~~~~~ 141 (177)
T 2o6r_A 134 NPWDCSCP 141 (177)
T ss_dssp SCBCCCHH
T ss_pred CCeeccCc
Confidence 99996554
No 298
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.22 E-value=2.8e-11 Score=114.28 Aligned_cols=131 Identities=17% Similarity=0.093 Sum_probs=98.3
Q ss_pred ccC-CCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCC--ccccceeeecCCeeEEEEEecCCCCH
Q 010131 202 KIG-KGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEEHQRILVYEYMHNGTL 278 (517)
Q Consensus 202 ~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~~~~~lv~e~~~~gsL 278 (517)
.++ .|..+.||++...+|+.+++|+.... ....+..|+.+++.+.+.+ +.+++++....+..++||||++|.++
T Consensus 26 ~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l 102 (264)
T 1nd4_A 26 QQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDL 102 (264)
T ss_dssp ECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEET
T ss_pred ecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCccc
Confidence 354 55569999998877888999997653 2245778999999885444 55688888877788999999999888
Q ss_pred HhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------------
Q 010131 279 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-------------------------------------------- 314 (517)
Q Consensus 279 ~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~-------------------------------------------- 314 (517)
. .. . .. ...++.++++.|..||+..
T Consensus 103 ~--~~----~--~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (264)
T 1nd4_A 103 L--SS----H--LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELF 171 (264)
T ss_dssp T--TS----C--CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHH
T ss_pred C--cC----c--CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHH
Confidence 4 22 1 11 2357788888888888721
Q ss_pred -----------CCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 315 -----------NPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 315 -----------~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
...++|||++|.||++++++.+.|+||+.+..
T Consensus 172 ~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 172 ARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11299999999999998776677999997653
No 299
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.20 E-value=2.1e-11 Score=125.02 Aligned_cols=105 Identities=24% Similarity=0.320 Sum_probs=91.6
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++ +| .+..+++|+.|+|++|.|++.+|. |.++++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 198 L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 275 (452)
T 3zyi_A 198 LKYLNLGMCNIKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAH 275 (452)
T ss_dssp CCEEECTTSCCSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCcccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCC
Confidence 6788999999984 55 588899999999999999999887 99999999999999999988888999999999999999
Q ss_pred ccccCCCCccccc---cceeeeccCCCccccc
Q 010131 80 NSFVGEIPPALLT---GKVIFKYDNNPKLHKE 108 (517)
Q Consensus 80 N~l~~~~P~~~~~---~~~~~~~~~n~~~~~~ 108 (517)
|+|+ .+|...+. .+..+.+.+||+.|..
T Consensus 276 N~l~-~~~~~~~~~l~~L~~L~L~~Np~~CdC 306 (452)
T 3zyi_A 276 NNLS-SLPHDLFTPLRYLVELHLHHNPWNCDC 306 (452)
T ss_dssp SCCS-CCCTTSSTTCTTCCEEECCSSCEECST
T ss_pred CcCC-ccChHHhccccCCCEEEccCCCcCCCC
Confidence 9999 67765543 4567889999999874
No 300
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.19 E-value=4.6e-11 Score=113.71 Aligned_cols=83 Identities=24% Similarity=0.316 Sum_probs=48.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..|..|.++++|+.|+|++|++++.++. |..+++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 87 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 166 (272)
T 3rfs_A 87 LTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSY 166 (272)
T ss_dssp CCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCC
Confidence 45566666666644444455566666666666666655555 55666666666666666644444455666666666666
Q ss_pred cccc
Q 010131 80 NSFV 83 (517)
Q Consensus 80 N~l~ 83 (517)
|+++
T Consensus 167 n~l~ 170 (272)
T 3rfs_A 167 NQLQ 170 (272)
T ss_dssp SCCC
T ss_pred CCcC
Confidence 6666
No 301
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.19 E-value=1.2e-11 Score=131.76 Aligned_cols=107 Identities=20% Similarity=0.143 Sum_probs=82.1
Q ss_pred CceecCCCCccccc-CCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGE-IPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~-~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
|+.|+|++|++++. +|..|..+++|+.|+|++|++++.+|. |..+++|+.|+|++|++++.+|..+..+++|+.|+++
T Consensus 450 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~ 529 (606)
T 3vq2_A 450 LNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCS 529 (606)
T ss_dssp CCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECT
T ss_pred CCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECC
Confidence 56777777777763 677777788888888888888887776 7888888888888888887777778888888888888
Q ss_pred cccccCCCCccccc---cceeeeccCCCccccc
Q 010131 79 NNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 108 (517)
Q Consensus 79 ~N~l~~~~P~~~~~---~~~~~~~~~n~~~~~~ 108 (517)
+|+++ .+|..+.. ....+.+.+||+.|..
T Consensus 530 ~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 530 FNRIE-TSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp TSCCC-CEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CCcCc-ccCHhHhhhcccCcEEEccCCCcccCC
Confidence 88888 67776433 3566778888888763
No 302
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.18 E-value=2.3e-11 Score=129.98 Aligned_cols=102 Identities=15% Similarity=0.046 Sum_probs=79.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
+++|||++|+|++..|..|.++++|+.|+|++|+|++.+|+ |.+|++|++|+|++|+|++..|..|.++++|++|++++
T Consensus 54 ~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~ 133 (635)
T 4g8a_A 54 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 133 (635)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTT
T ss_pred CCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCC
Confidence 57889999999866667888899999999999999988886 88899999999999998855555688888899999999
Q ss_pred ccccCCCCcccc---ccceeeeccCCC
Q 010131 80 NSFVGEIPPALL---TGKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~~~P~~~~---~~~~~~~~~~n~ 103 (517)
|+++ .+|+..+ ..+..+.+.+|.
T Consensus 134 N~l~-~l~~~~~~~L~~L~~L~Ls~N~ 159 (635)
T 4g8a_A 134 TNLA-SLENFPIGHLKTLKELNVAHNL 159 (635)
T ss_dssp SCCC-CSTTCCCTTCTTCCEEECCSSC
T ss_pred CcCC-CCChhhhhcCcccCeeccccCc
Confidence 9888 4665432 234455555553
No 303
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.18 E-value=4.2e-11 Score=117.36 Aligned_cols=104 Identities=21% Similarity=0.241 Sum_probs=87.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..|..|..+++|+.|+|++|.+++.++. +..+++|+.|+|++|+++ .+|..+..+++|+.|++++
T Consensus 194 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~ 272 (330)
T 1xku_A 194 LTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHN 272 (330)
T ss_dssp CSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCS
T ss_pred CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCC
Confidence 57889999999987788899999999999999999998886 889999999999999999 8899999999999999999
Q ss_pred ccccCCCCccccc---------cceeeeccCCCccc
Q 010131 80 NSFVGEIPPALLT---------GKVIFKYDNNPKLH 106 (517)
Q Consensus 80 N~l~~~~P~~~~~---------~~~~~~~~~n~~~~ 106 (517)
|+++ .+|...+. ....+.+.+||..+
T Consensus 273 N~i~-~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 273 NNIS-AIGSNDFCPPGYNTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp SCCC-CCCTTSSSCSSCCTTSCCCSEEECCSSSSCG
T ss_pred CcCC-ccChhhcCCcccccccccccceEeecCcccc
Confidence 9999 57665442 22346678888654
No 304
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.17 E-value=4.7e-11 Score=127.78 Aligned_cols=105 Identities=14% Similarity=0.212 Sum_probs=94.1
Q ss_pred CceecCCCCcccccCCcccc--CCCCCcEEEcCCCCCCCCCCcccCccccceeEe------cCceeeecCCCCCCCcccc
Q 010131 1 MARCALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHL------ENNELTGSLPSYMGSLPNL 72 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l------~~n~l~~~~p~~~~~l~~L 72 (517)
|+.|+|++|+++ .+|..++ .+++|+.|+|++|+|++.++.+..+++|+.|+| ++|++.+.+|..++.+++|
T Consensus 490 L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L 568 (636)
T 4eco_A 490 LTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSKFPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSL 568 (636)
T ss_dssp CCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred ccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCCcChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCC
Confidence 678999999999 7999887 999999999999999994344999999999999 5688899999999999999
Q ss_pred cccccccccccCCCCccccccceeeeccCCCcccc
Q 010131 73 QELHIENNSFVGEIPPALLTGKVIFKYDNNPKLHK 107 (517)
Q Consensus 73 ~~l~l~~N~l~~~~P~~~~~~~~~~~~~~n~~~~~ 107 (517)
+.|++++|++ +.+|..+...+..+.+.+|+..|-
T Consensus 569 ~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 569 TQLQIGSNDI-RKVNEKITPNISVLDIKDNPNISI 602 (636)
T ss_dssp CEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCEE
T ss_pred CEEECCCCcC-CccCHhHhCcCCEEECcCCCCccc
Confidence 9999999999 499998888888889999998764
No 305
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.15 E-value=4e-11 Score=125.93 Aligned_cols=100 Identities=25% Similarity=0.302 Sum_probs=85.7
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|+|++ +|. |+++++|+.|+|++|.|+..++.|+.+++|+.|+|++|+|++ +| .++.+++|+.|++++|
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N 518 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNN 518 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCCCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCcccccccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCC
Confidence 5789999999995 786 999999999999999999443349999999999999999995 78 8999999999999999
Q ss_pred cccCCC-Cccccc--cceeeeccCCCc
Q 010131 81 SFVGEI-PPALLT--GKVIFKYDNNPK 104 (517)
Q Consensus 81 ~l~~~~-P~~~~~--~~~~~~~~~n~~ 104 (517)
+|++.. |..+.. .+..+.+.+|+.
T Consensus 519 ~l~~~~~p~~l~~l~~L~~L~L~~N~l 545 (567)
T 1dce_A 519 RLQQSAAIQPLVSCPRLVLLNLQGNSL 545 (567)
T ss_dssp CCCSSSTTGGGGGCTTCCEEECTTSGG
T ss_pred CCCCCCCcHHHhcCCCCCEEEecCCcC
Confidence 999654 777643 556777888864
No 306
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.15 E-value=3.4e-11 Score=130.44 Aligned_cols=100 Identities=30% Similarity=0.428 Sum_probs=76.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++. .+|..++++++|+.|+|++|.|+ .+|. |++|++|+.|+|++|+|+ .+|..|++|++|+.|+|++
T Consensus 226 L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~ 302 (727)
T 4b8c_D 226 WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFD 302 (727)
T ss_dssp CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCS
T ss_pred CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCC
Confidence 567888888887 67777778888888888888888 4454 888888888888888888 7788888888888888888
Q ss_pred ccccCCCCccccc--cceeeeccCCCc
Q 010131 80 NSFVGEIPPALLT--GKVIFKYDNNPK 104 (517)
Q Consensus 80 N~l~~~~P~~~~~--~~~~~~~~~n~~ 104 (517)
|.|+ .+|..+.. .+..+.+.+|+.
T Consensus 303 N~l~-~lp~~~~~l~~L~~L~L~~N~l 328 (727)
T 4b8c_D 303 NMVT-TLPWEFGNLCNLQFLGVEGNPL 328 (727)
T ss_dssp SCCC-CCCSSTTSCTTCCCEECTTSCC
T ss_pred CCCC-ccChhhhcCCCccEEeCCCCcc
Confidence 8887 77776543 455566677754
No 307
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.14 E-value=5.7e-11 Score=116.55 Aligned_cols=104 Identities=22% Similarity=0.184 Sum_probs=87.6
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..|..|..+++|+.|+|++|.+++.++. +..+++|+.|+|++|+++ .+|..+..+++|+.|++++
T Consensus 195 L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~ 273 (332)
T 2ft3_A 195 LNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHT 273 (332)
T ss_dssp CSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCS
T ss_pred CCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCC
Confidence 57889999999977778899999999999999999998886 999999999999999999 8999999999999999999
Q ss_pred ccccCCCCccccc---------cceeeeccCCCccc
Q 010131 80 NSFVGEIPPALLT---------GKVIFKYDNNPKLH 106 (517)
Q Consensus 80 N~l~~~~P~~~~~---------~~~~~~~~~n~~~~ 106 (517)
|+++ .+|...+. ....+.+.+||..+
T Consensus 274 N~l~-~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~ 308 (332)
T 2ft3_A 274 NNIT-KVGVNDFCPVGFGVKRAYYNGISLFNNPVPY 308 (332)
T ss_dssp SCCC-BCCTTSSSCSSCCSSSCCBSEEECCSSSSCG
T ss_pred CCCC-ccChhHccccccccccccccceEeecCcccc
Confidence 9999 56654332 23456788888764
No 308
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.13 E-value=3.6e-11 Score=126.30 Aligned_cols=86 Identities=27% Similarity=0.319 Sum_probs=79.7
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecC-CCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSL-PSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~-p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|+ .+|..|++|++|+.|+|++|.|++ +|.++.+++|+.|+|++|+|++.. |..++.+++|+.|++++
T Consensus 465 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~ 542 (567)
T 1dce_A 465 VTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VDGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQG 542 (567)
T ss_dssp CCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CGGGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTT
T ss_pred CcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-CcccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecC
Confidence 689999999999 899999999999999999999998 568999999999999999999766 99999999999999999
Q ss_pred ccccCCCCcc
Q 010131 80 NSFVGEIPPA 89 (517)
Q Consensus 80 N~l~~~~P~~ 89 (517)
|++++ +|+.
T Consensus 543 N~l~~-~~~~ 551 (567)
T 1dce_A 543 NSLCQ-EEGI 551 (567)
T ss_dssp SGGGG-SSSC
T ss_pred CcCCC-CccH
Confidence 99995 4543
No 309
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.13 E-value=3.2e-11 Score=108.87 Aligned_cols=84 Identities=14% Similarity=0.262 Sum_probs=52.9
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|.++ .++.+..+++|+.|+|++|.+++..|. +..+++|+.|+|++|.+++..|..+..+++|+.|++++
T Consensus 68 L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~ 145 (197)
T 4ezg_A 68 IKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDLSY 145 (197)
T ss_dssp CSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEECCS
T ss_pred CCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEccC
Confidence 456666666554 233566666666666666666664443 66666666666666666655566666666666666666
Q ss_pred cc-ccCCCC
Q 010131 80 NS-FVGEIP 87 (517)
Q Consensus 80 N~-l~~~~P 87 (517)
|. ++ .+|
T Consensus 146 n~~i~-~~~ 153 (197)
T 4ezg_A 146 NGAIT-DIM 153 (197)
T ss_dssp CTBCC-CCG
T ss_pred CCCcc-ccH
Confidence 66 44 455
No 310
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.13 E-value=1.1e-10 Score=111.97 Aligned_cols=102 Identities=22% Similarity=0.266 Sum_probs=65.7
Q ss_pred CceecCCCCc-ccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKN-LKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~-~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
|++|+|++|. +....|..|..+++|+.|+|++|.+++.+|. |..+++|+.|+|++|++++..+..+..+++|+.|+++
T Consensus 82 L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 161 (285)
T 1ozn_A 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLH 161 (285)
T ss_dssp CCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECC
Confidence 5667777776 5544466677777777777777777776665 6777777777777777774444456677777777777
Q ss_pred cccccCCCCcc-cc--ccceeeeccCCC
Q 010131 79 NNSFVGEIPPA-LL--TGKVIFKYDNNP 103 (517)
Q Consensus 79 ~N~l~~~~P~~-~~--~~~~~~~~~~n~ 103 (517)
+|+++ .+|.. +. ..+..+.+.+|.
T Consensus 162 ~n~l~-~~~~~~~~~l~~L~~L~l~~n~ 188 (285)
T 1ozn_A 162 GNRIS-SVPERAFRGLHSLDRLLLHQNR 188 (285)
T ss_dssp SSCCC-EECTTTTTTCTTCCEEECCSSC
T ss_pred CCccc-ccCHHHhcCccccCEEECCCCc
Confidence 77777 44443 21 233444455553
No 311
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.13 E-value=2.7e-11 Score=129.58 Aligned_cols=102 Identities=19% Similarity=0.280 Sum_probs=87.3
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCC-----------------------------------------------
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGN----------------------------------------------- 33 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N----------------------------------------------- 33 (517)
++.|+|++|+++|.+|+.|++|++|+.|+|++|
T Consensus 83 V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~ 162 (636)
T 4eco_A 83 VTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLI 162 (636)
T ss_dssp EEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHH
T ss_pred EEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHH
Confidence 467999999999999999999999999999988
Q ss_pred -------------------------------CCCCCCCc-ccCccccceeEecCceeeec-----------------CCC
Q 010131 34 -------------------------------FLTGPLPD-MSRLIDLRIVHLENNELTGS-----------------LPS 64 (517)
Q Consensus 34 -------------------------------~l~~~~p~-~~~l~~L~~l~l~~n~l~~~-----------------~p~ 64 (517)
+|+| +|+ |+++++|+.|+|++|.|+|. +|.
T Consensus 163 ~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~ 241 (636)
T 4eco_A 163 KDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTE 241 (636)
T ss_dssp HHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTS
T ss_pred HHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCch
Confidence 3445 665 99999999999999999975 999
Q ss_pred CCC--CcccccccccccccccCCCCccccc--cceeeeccCCC
Q 010131 65 YMG--SLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 103 (517)
Q Consensus 65 ~~~--~l~~L~~l~l~~N~l~~~~P~~~~~--~~~~~~~~~n~ 103 (517)
.++ ++++|++|++++|++.|.+|..+.. .+..+.+.+|.
T Consensus 242 ~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~ 284 (636)
T 4eco_A 242 DLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNR 284 (636)
T ss_dssp CCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCT
T ss_pred hhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCC
Confidence 999 9999999999999999999987754 45566677775
No 312
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.12 E-value=2.7e-11 Score=121.71 Aligned_cols=103 Identities=17% Similarity=0.173 Sum_probs=48.3
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCccccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNS 81 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 81 (517)
++|+|++|.+++..|..|..+++|+.|+|++|++++.++.+..+++|+.|+|++|+++ .+|..+..+++|+.|++++|+
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~ 329 (390)
T 3o6n_A 251 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNS 329 (390)
T ss_dssp SEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSC
T ss_pred cEEECCCCcCCCcChhHccccccCCEEECCCCcCcccCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCc
Confidence 3444444444444444444444444444444444443333444444445555555444 344444444455555555555
Q ss_pred ccCCCCccccccceeeeccCCCccc
Q 010131 82 FVGEIPPALLTGKVIFKYDNNPKLH 106 (517)
Q Consensus 82 l~~~~P~~~~~~~~~~~~~~n~~~~ 106 (517)
++ .+|.........+.+.+|++.|
T Consensus 330 i~-~~~~~~~~~L~~L~l~~N~~~~ 353 (390)
T 3o6n_A 330 IV-TLKLSTHHTLKNLTLSHNDWDC 353 (390)
T ss_dssp CC-CCCCCTTCCCSEEECCSSCEEH
T ss_pred cc-eeCchhhccCCEEEcCCCCccc
Confidence 44 3343333344445555555554
No 313
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.12 E-value=2.7e-11 Score=131.17 Aligned_cols=89 Identities=33% Similarity=0.427 Sum_probs=81.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|+|+ .+|..|++|++|+.|+|++|.|+..++.|+.|++|+.|+|++|.|+ .+|..|+.+++|+.|+|++|
T Consensus 249 L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N 326 (727)
T 4b8c_D 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTSLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGN 326 (727)
T ss_dssp CSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCSSCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTS
T ss_pred CCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCCccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCC
Confidence 689999999999 8999999999999999999999954334999999999999999998 99999999999999999999
Q ss_pred cccCCCCcccc
Q 010131 81 SFVGEIPPALL 91 (517)
Q Consensus 81 ~l~~~~P~~~~ 91 (517)
.|+|.+|..+.
T Consensus 327 ~l~~~~p~~~~ 337 (727)
T 4b8c_D 327 PLEKQFLKILT 337 (727)
T ss_dssp CCCSHHHHHHH
T ss_pred ccCCCChHHHh
Confidence 99987776653
No 314
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.12 E-value=1.6e-10 Score=109.85 Aligned_cols=88 Identities=23% Similarity=0.357 Sum_probs=59.0
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|+++...+..|.++++|+.|+|++|.+++.++. |..+++|+.|+|++|++++..|..+..+++|+.|++++
T Consensus 63 L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 142 (270)
T 2o6q_A 63 LRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGY 142 (270)
T ss_dssp CCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCC
Confidence 56677777777743333446677777777777777776665 66777777777777777755555566777777777777
Q ss_pred ccccCCCCcc
Q 010131 80 NSFVGEIPPA 89 (517)
Q Consensus 80 N~l~~~~P~~ 89 (517)
|.++ .+|..
T Consensus 143 n~l~-~~~~~ 151 (270)
T 2o6q_A 143 NELQ-SLPKG 151 (270)
T ss_dssp SCCC-CCCTT
T ss_pred CcCC-ccCHh
Confidence 7776 45544
No 315
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.12 E-value=2.6e-11 Score=128.87 Aligned_cols=104 Identities=17% Similarity=0.174 Sum_probs=48.6
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCccccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNS 81 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 81 (517)
+.|+|++|.+++.+|..|+++++|+.|+|++|.|++.++.+..+++|+.|+|++|.++ .+|..+..+++|+.|++++|+
T Consensus 257 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~ 335 (597)
T 3oja_B 257 VEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVALNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNS 335 (597)
T ss_dssp SEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCEEECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSC
T ss_pred CEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCCCCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCC
Confidence 3444444444444444444444444444444444443333444444444444444444 444444444444455555554
Q ss_pred ccCCCCccccccceeeeccCCCcccc
Q 010131 82 FVGEIPPALLTGKVIFKYDNNPKLHK 107 (517)
Q Consensus 82 l~~~~P~~~~~~~~~~~~~~n~~~~~ 107 (517)
++ .+|......+..+.+.+||+.|.
T Consensus 336 l~-~~~~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 336 IV-TLKLSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp CC-CCCCCTTCCCSEEECCSSCEEHH
T ss_pred CC-CcChhhcCCCCEEEeeCCCCCCh
Confidence 44 23333333444455556655543
No 316
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.12 E-value=5.3e-11 Score=117.52 Aligned_cols=84 Identities=23% Similarity=0.188 Sum_probs=74.1
Q ss_pred CceecCCC-CcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCC-CCCccccccccc
Q 010131 1 MARCALSG-KNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELHI 77 (517)
Q Consensus 1 l~~L~l~~-n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~-~~~l~~L~~l~l 77 (517)
|+.|+|++ |+|++..|..|++|++|+.|+|++|+|++.+|. |.+|++|+.|+|++|+|+ .+|.. +..++ |+.|+|
T Consensus 33 L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~~~~~~~~~~-L~~l~l 110 (347)
T 2ifg_A 33 LTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE-SLSWKTVQGLS-LQELVL 110 (347)
T ss_dssp CSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCS-CCCSTTTCSCC-CCEEEC
T ss_pred eeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccc-eeCHHHcccCC-ceEEEe
Confidence 68999996 999987778899999999999999999999997 999999999999999999 55554 44454 999999
Q ss_pred ccccccCCCC
Q 010131 78 ENNSFVGEIP 87 (517)
Q Consensus 78 ~~N~l~~~~P 87 (517)
.+|.+. +.+
T Consensus 111 ~~N~~~-c~c 119 (347)
T 2ifg_A 111 SGNPLH-CSC 119 (347)
T ss_dssp CSSCCC-CCG
T ss_pred eCCCcc-CCC
Confidence 999998 444
No 317
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.11 E-value=3.4e-11 Score=106.64 Aligned_cols=100 Identities=22% Similarity=0.254 Sum_probs=82.2
Q ss_pred CceecCCCCcccccCCccccCC-CCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCC-CCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNM-EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l-~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~-~~~l~~L~~l~l~ 78 (517)
|+.|+|++|+++ .+|. +..+ ++|+.|+|++|.|++. +.|..+++|+.|+|++|+++ .+|.. +..+++|+.|+++
T Consensus 21 L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~-~~l~~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~ 96 (176)
T 1a9n_A 21 DRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL-DGFPLLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILT 96 (176)
T ss_dssp CEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE-CCCCCCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECC
T ss_pred ceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc-cccccCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECC
Confidence 578999999999 5664 5555 4999999999999987 67999999999999999999 45554 4899999999999
Q ss_pred cccccCCCCc--ccc--ccceeeeccCCCcc
Q 010131 79 NNSFVGEIPP--ALL--TGKVIFKYDNNPKL 105 (517)
Q Consensus 79 ~N~l~~~~P~--~~~--~~~~~~~~~~n~~~ 105 (517)
+|+++ .+|. .+. ..+..+.+.+|+..
T Consensus 97 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 97 NNSLV-ELGDLDPLASLKSLTYLCILRNPVT 126 (176)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSGGG
T ss_pred CCcCC-cchhhHhhhcCCCCCEEEecCCCCC
Confidence 99997 7886 443 24566778888754
No 318
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.11 E-value=1.1e-10 Score=127.81 Aligned_cols=104 Identities=15% Similarity=0.268 Sum_probs=91.0
Q ss_pred CceecCCCCcccccCCcccc--CCCCCcEEEcCCCCCCCCCCcccCccccceeEecC------ceeeecCCCCCCCcccc
Q 010131 1 MARCALSGKNLKGEIPPELK--NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLEN------NELTGSLPSYMGSLPNL 72 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~--~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~------n~l~~~~p~~~~~l~~L 72 (517)
|+.|+|++|+++ .+|..++ .+++|+.|+|++|.|++.++.+..+++|+.|+|++ |++.+.+|..+..+++|
T Consensus 730 L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L 808 (876)
T 4ecn_A 730 LTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSSFPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSL 808 (876)
T ss_dssp CCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSSCCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred ccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCccchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCC
Confidence 578999999999 7898887 89999999999999999544588999999999976 88888999999999999
Q ss_pred cccccccccccCCCCccccccceeeeccCCCccc
Q 010131 73 QELHIENNSFVGEIPPALLTGKVIFKYDNNPKLH 106 (517)
Q Consensus 73 ~~l~l~~N~l~~~~P~~~~~~~~~~~~~~n~~~~ 106 (517)
+.|++++|++ +.+|..+...+..+.+.+|+...
T Consensus 809 ~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~~ 841 (876)
T 4ecn_A 809 IQLQIGSNDI-RKVDEKLTPQLYILDIADNPNIS 841 (876)
T ss_dssp CEEECCSSCC-CBCCSCCCSSSCEEECCSCTTCE
T ss_pred CEEECCCCCC-CccCHhhcCCCCEEECCCCCCCc
Confidence 9999999999 59999888777888888998653
No 319
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.11 E-value=3.7e-11 Score=105.47 Aligned_cols=84 Identities=21% Similarity=0.261 Sum_probs=75.5
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCC--CCCCCccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLP--SYMGSLPNLQELHI 77 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p--~~~~~l~~L~~l~l 77 (517)
|+.|+|++|.+++. ..+..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|.++ .+| ..+..+++|+.|++
T Consensus 51 L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~~~~~~~l~~l~~L~~L~l 127 (168)
T 2ell_A 51 LEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLK-DISTLEPLKKLECLKSLDL 127 (168)
T ss_dssp CCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCC-SSGGGGGGSSCSCCCEEEC
T ss_pred CCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccC-cchhHHHHhcCCCCCEEEe
Confidence 68999999999965 7899999999999999999998887 777999999999999999 544 67999999999999
Q ss_pred ccccccCCCCc
Q 010131 78 ENNSFVGEIPP 88 (517)
Q Consensus 78 ~~N~l~~~~P~ 88 (517)
++|+++ .+|.
T Consensus 128 ~~N~l~-~~~~ 137 (168)
T 2ell_A 128 FNCEVT-NLND 137 (168)
T ss_dssp CSSGGG-TSTT
T ss_pred eCCcCc-chHH
Confidence 999999 5665
No 320
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.11 E-value=5.7e-11 Score=122.67 Aligned_cols=106 Identities=18% Similarity=0.242 Sum_probs=93.0
Q ss_pred CceecCCCCcccccCC-ccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
|+.|+|++|+++ .+| ..|.++++|+.|+|++|.+++.++. |..+++|+.|+|++|++++..|..+..+++|+.|+++
T Consensus 226 L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 304 (477)
T 2id5_A 226 LTSLSITHCNLT-AVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVS 304 (477)
T ss_dssp CSEEEEESSCCC-SCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECC
T ss_pred ccEEECcCCccc-ccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECC
Confidence 578889999999 455 5788999999999999999998887 9999999999999999998889999999999999999
Q ss_pred cccccCCCCccccc---cceeeeccCCCccccc
Q 010131 79 NNSFVGEIPPALLT---GKVIFKYDNNPKLHKE 108 (517)
Q Consensus 79 ~N~l~~~~P~~~~~---~~~~~~~~~n~~~~~~ 108 (517)
+|+++ .+|+..+. .+..+.+.+||+.|..
T Consensus 305 ~N~l~-~~~~~~~~~l~~L~~L~l~~N~l~c~c 336 (477)
T 2id5_A 305 GNQLT-TLEESVFHSVGNLETLILDSNPLACDC 336 (477)
T ss_dssp SSCCS-CCCGGGBSCGGGCCEEECCSSCEECSG
T ss_pred CCcCc-eeCHhHcCCCcccCEEEccCCCccCcc
Confidence 99999 57765543 4567889999998873
No 321
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.10 E-value=6e-11 Score=104.97 Aligned_cols=84 Identities=21% Similarity=0.194 Sum_probs=59.6
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCC--CCCCccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQELHI 77 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~--~~~~l~~L~~l~l 77 (517)
|+.|+|++|++++. +.|..+++|+.|+|++|.|++.+|. |..+++|+.|+|++|+++ .+|. .+..+++|+.|++
T Consensus 44 L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l 120 (176)
T 1a9n_A 44 FDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLCI 120 (176)
T ss_dssp CSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEEC
T ss_pred CCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEEe
Confidence 46677777777753 4677777777777777777776666 477777777777777775 5665 5677777777777
Q ss_pred ccccccCCCCc
Q 010131 78 ENNSFVGEIPP 88 (517)
Q Consensus 78 ~~N~l~~~~P~ 88 (517)
++|+++ .+|.
T Consensus 121 ~~N~i~-~~~~ 130 (176)
T 1a9n_A 121 LRNPVT-NKKH 130 (176)
T ss_dssp CSSGGG-GSTT
T ss_pred cCCCCC-CcHh
Confidence 777776 5554
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.10 E-value=1.7e-10 Score=109.95 Aligned_cols=102 Identities=15% Similarity=0.048 Sum_probs=80.7
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++..+..|.++++|+.|+|++|.+++.++. |..+++|+.|+|++|.+++..|..+..+++|+.|++++
T Consensus 30 l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~ 109 (276)
T 2z62_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (276)
T ss_dssp CCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCC
Confidence 57889999999876666888899999999999999888875 88899999999999999877777888888999999999
Q ss_pred ccccCCCCc-ccc--ccceeeeccCCC
Q 010131 80 NSFVGEIPP-ALL--TGKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~~~P~-~~~--~~~~~~~~~~n~ 103 (517)
|++++ ++. .+. ..+..+.+.+|.
T Consensus 110 n~l~~-~~~~~~~~l~~L~~L~l~~n~ 135 (276)
T 2z62_A 110 TNLAS-LENFPIGHLKTLKELNVAHNL 135 (276)
T ss_dssp SCCCC-STTCCCTTCTTCCEEECCSSC
T ss_pred CCccc-cCchhcccCCCCCEEECcCCc
Confidence 98884 444 332 244555666664
No 323
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.10 E-value=3.7e-11 Score=131.68 Aligned_cols=103 Identities=18% Similarity=0.273 Sum_probs=88.5
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEc-CCCCCCCC-----------------------------------------
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWL-DGNFLTGP----------------------------------------- 38 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l-~~N~l~~~----------------------------------------- 38 (517)
++.|+|++|+++|.+|+.|++|++|+.|+| ++|.++|.
T Consensus 325 V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~ 404 (876)
T 4ecn_A 325 VTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLL 404 (876)
T ss_dssp EEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHH
T ss_pred EEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHH
Confidence 467999999999999999999999999999 77765544
Q ss_pred -----------------------------------CCc-ccCccccceeEecCceeee-----------------cCCCC
Q 010131 39 -----------------------------------LPD-MSRLIDLRIVHLENNELTG-----------------SLPSY 65 (517)
Q Consensus 39 -----------------------------------~p~-~~~l~~L~~l~l~~n~l~~-----------------~~p~~ 65 (517)
+|. |++|++|+.|+|++|+|+| .+|..
T Consensus 405 ~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~ 484 (876)
T 4ecn_A 405 QDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEE 484 (876)
T ss_dssp HHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSC
T ss_pred HHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChh
Confidence 665 8999999999999999998 49999
Q ss_pred CC--CcccccccccccccccCCCCccccc--cceeeeccCCC
Q 010131 66 MG--SLPNLQELHIENNSFVGEIPPALLT--GKVIFKYDNNP 103 (517)
Q Consensus 66 ~~--~l~~L~~l~l~~N~l~~~~P~~~~~--~~~~~~~~~n~ 103 (517)
++ ++++|+.|++++|++.|.+|..+.. .+..+.+.+|.
T Consensus 485 l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~ 526 (876)
T 4ecn_A 485 LSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNR 526 (876)
T ss_dssp CCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCT
T ss_pred hhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCC
Confidence 88 9999999999999999999987654 55667777775
No 324
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.10 E-value=3.3e-11 Score=103.50 Aligned_cols=85 Identities=19% Similarity=0.219 Sum_probs=75.9
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeec-CCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGS-LPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~-~p~~~~~l~~L~~l~l~ 78 (517)
|+.|+|++|++++. ..++++++|+.|+|++|.+++.+|. +..+++|+.|++++|.+++. .|..+..+++|+.|+++
T Consensus 44 L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~ 121 (149)
T 2je0_A 44 LEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLF 121 (149)
T ss_dssp CCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEECT
T ss_pred CcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEeCc
Confidence 68999999999965 7799999999999999999998887 77799999999999999953 34789999999999999
Q ss_pred cccccCCCCc
Q 010131 79 NNSFVGEIPP 88 (517)
Q Consensus 79 ~N~l~~~~P~ 88 (517)
+|++++ +|+
T Consensus 122 ~N~l~~-~~~ 130 (149)
T 2je0_A 122 NCEVTN-LND 130 (149)
T ss_dssp TCGGGG-STT
T ss_pred CCcccc-hHH
Confidence 999994 554
No 325
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.09 E-value=1.1e-10 Score=123.29 Aligned_cols=107 Identities=21% Similarity=0.229 Sum_probs=78.9
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCC-CCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLT-GPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~-~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
|+.|+|++|.+++..|..|.++++|+.|+|++|.++ +.+|. +..+++|+.|+|++|++++..|..+..+++|+.|+++
T Consensus 423 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 502 (570)
T 2z63_A 423 LIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502 (570)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCC
Confidence 567777777777777777777888888888888877 45665 7788888888888888887777788888888888888
Q ss_pred cccccCCCCcccc--ccceeeeccCCCcccc
Q 010131 79 NNSFVGEIPPALL--TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 79 ~N~l~~~~P~~~~--~~~~~~~~~~n~~~~~ 107 (517)
+|++++..|..+. ..+..+.+.+|++.|.
T Consensus 503 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 8888843333332 2455677888887765
No 326
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.08 E-value=2.2e-10 Score=109.18 Aligned_cols=103 Identities=18% Similarity=0.205 Sum_probs=76.0
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..+..|.++++|+.|+|++|.+++.++. |.++++|+.|++++|++++..+..++.+++|+.|++++
T Consensus 54 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 133 (276)
T 2z62_A 54 LQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAH 133 (276)
T ss_dssp CSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCS
T ss_pred CcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcC
Confidence 57788888888866666778888888888888888887776 88888888888888888855555678888888888888
Q ss_pred ccccC-CCCccccc--cceeeeccCCC
Q 010131 80 NSFVG-EIPPALLT--GKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~-~~P~~~~~--~~~~~~~~~n~ 103 (517)
|++++ .+|..+.. .+..+.+.+|.
T Consensus 134 n~l~~~~l~~~~~~l~~L~~L~Ls~N~ 160 (276)
T 2z62_A 134 NLIQSFKLPEYFSNLTNLEHLDLSSNK 160 (276)
T ss_dssp SCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred CccceecCchhhccCCCCCEEECCCCC
Confidence 88874 25655542 44455556553
No 327
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.08 E-value=1.2e-10 Score=119.44 Aligned_cols=104 Identities=18% Similarity=0.166 Sum_probs=91.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++.+|..|.++++|+.|+|++|.+++.+|. |..+++|+.|+|++|.+++..|..+..+++|+.|++++
T Consensus 277 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 356 (455)
T 3v47_A 277 VKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSY 356 (455)
T ss_dssp CCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCS
T ss_pred ceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCC
Confidence 57899999999999999999999999999999999999886 99999999999999999988888899999999999999
Q ss_pred ccccCCCCccccc--cceeeeccCCCc
Q 010131 80 NSFVGEIPPALLT--GKVIFKYDNNPK 104 (517)
Q Consensus 80 N~l~~~~P~~~~~--~~~~~~~~~n~~ 104 (517)
|++++..|..+.. .+..+.+.+|.-
T Consensus 357 N~l~~~~~~~~~~l~~L~~L~L~~N~l 383 (455)
T 3v47_A 357 NHIRALGDQSFLGLPNLKELALDTNQL 383 (455)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcccccChhhccccccccEEECCCCcc
Confidence 9999666665543 456667777753
No 328
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.08 E-value=5.6e-11 Score=131.47 Aligned_cols=104 Identities=22% Similarity=0.290 Sum_probs=74.1
Q ss_pred CceecCCCCccc-----ccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccc
Q 010131 1 MARCALSGKNLK-----GEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 74 (517)
Q Consensus 1 l~~L~l~~n~~~-----~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~ 74 (517)
|+.|+|++|.++ +..|..|.++++|+.|+|++|+|++.+|. |..+++|+.|+|++|+|++..|..+. ++|+.
T Consensus 453 L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~ 530 (844)
T 3j0a_A 453 LEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP--ANLEI 530 (844)
T ss_dssp CCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC--SCCCE
T ss_pred cccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhh--ccccE
Confidence 345555555554 22334566778888888888888888777 78888888888888888854444444 78888
Q ss_pred cccccccccCCCCccccccceeeeccCCCcccc
Q 010131 75 LHIENNSFVGEIPPALLTGKVIFKYDNNPKLHK 107 (517)
Q Consensus 75 l~l~~N~l~~~~P~~~~~~~~~~~~~~n~~~~~ 107 (517)
|++++|++++..|.. +.....+.+.+||+.|.
T Consensus 531 L~Ls~N~l~~~~~~~-~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 531 LDISRNQLLAPNPDV-FVSLSVLDITHNKFICE 562 (844)
T ss_dssp EEEEEECCCCCCSCC-CSSCCEEEEEEECCCCS
T ss_pred EECCCCcCCCCChhH-hCCcCEEEecCCCcccc
Confidence 888888888655544 34566778899998883
No 329
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.08 E-value=2.2e-10 Score=121.67 Aligned_cols=102 Identities=19% Similarity=0.220 Sum_probs=80.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCC-CCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~-~~~l~~L~~l~l~ 78 (517)
|+.|+|++|.+++..|..|+++++|+.|+|++|.|++.+|. |+++++|+.|+|++|.|+ .+|.. |+.+++|+.|+++
T Consensus 77 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls 155 (597)
T 3oja_B 77 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMS 155 (597)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCC-CCCHHHhccCCCCCEEEee
Confidence 67889999999977777888899999999999999998887 788999999999999988 45544 6888899999999
Q ss_pred cccccCCCCcccc--ccceeeeccCCC
Q 010131 79 NNSFVGEIPPALL--TGKVIFKYDNNP 103 (517)
Q Consensus 79 ~N~l~~~~P~~~~--~~~~~~~~~~n~ 103 (517)
+|.+++..|..+. ..+..+.+.+|.
T Consensus 156 ~N~l~~~~~~~~~~l~~L~~L~L~~N~ 182 (597)
T 3oja_B 156 NNNLERIEDDTFQATTSLQNLQLSSNR 182 (597)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECTTSC
T ss_pred CCcCCCCChhhhhcCCcCcEEECcCCC
Confidence 9999865554443 244556666664
No 330
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.07 E-value=1.7e-10 Score=118.23 Aligned_cols=102 Identities=20% Similarity=0.177 Sum_probs=85.3
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|+|++..|..|.++++|+.|+|++|.|++.+|. |.++++|+.|+|++|++++..+..+..+++|+.|++++
T Consensus 77 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 156 (452)
T 3zyi_A 77 TRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRN 156 (452)
T ss_dssp CSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCS
T ss_pred ccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCC
Confidence 57899999999988888999999999999999999999887 99999999999999999955555688999999999999
Q ss_pred ccccCCCCccccc---cceeeeccCCC
Q 010131 80 NSFVGEIPPALLT---GKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~~~P~~~~~---~~~~~~~~~n~ 103 (517)
|+++ .+|...+. .+..+.+.+|.
T Consensus 157 N~l~-~~~~~~~~~l~~L~~L~l~~~~ 182 (452)
T 3zyi_A 157 NPIE-SIPSYAFNRVPSLMRLDLGELK 182 (452)
T ss_dssp CCCC-EECTTTTTTCTTCCEEECCCCT
T ss_pred CCcc-eeCHhHHhcCCcccEEeCCCCC
Confidence 9999 67764432 34445555543
No 331
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.07 E-value=3.7e-10 Score=111.99 Aligned_cols=141 Identities=16% Similarity=0.232 Sum_probs=106.5
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEec--CCC-chhHHHHHHHHHHHhcCC--CCCccccceeeecC---CeeEEEEEe
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMA--DSC-SHRTQQFVTEVALLSRIH--HRNLVPLIGYCEEE---HQRILVYEY 272 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--h~niv~~~~~~~~~---~~~~lv~e~ 272 (517)
+.|+.|.++.||+.... +..+++|+.. ... ......+.+|+.+++.+. +..+.+++.++.+. +..++||||
T Consensus 44 ~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 56899999999999876 4678888765 322 122456888999999996 45678888888766 458999999
Q ss_pred cCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCC--------------------------------------
Q 010131 273 MHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGC-------------------------------------- 314 (517)
Q Consensus 273 ~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~-------------------------------------- 314 (517)
++|..+.+.. -..++..+...++.++++.|+.||+..
T Consensus 123 v~G~~l~~~~-----~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (359)
T 3dxp_A 123 VSGRVLWDQS-----LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAM 197 (359)
T ss_dssp CCCBCCCCTT-----CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHH
T ss_pred cCCeecCCCc-----cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHH
Confidence 9998775421 234678888899999999999999720
Q ss_pred -----------------CCCcEecCCCCCCeEeCCCCc--EEEccccCcccc
Q 010131 315 -----------------NPGIIHRDVKSSNILLDINMR--AKVSDFGLSRQA 347 (517)
Q Consensus 315 -----------------~~~ivH~dlk~~Nill~~~~~--~kl~Dfg~a~~~ 347 (517)
...++|||+++.||+++.++. +.|.||+.+...
T Consensus 198 ~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~g 249 (359)
T 3dxp_A 198 DSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTLG 249 (359)
T ss_dssp HHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEEE
T ss_pred HHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECccccccC
Confidence 257999999999999997753 689999988653
No 332
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.06 E-value=5.1e-11 Score=115.86 Aligned_cols=85 Identities=19% Similarity=0.241 Sum_probs=63.6
Q ss_pred CceecCCCCcccccCCccc--cCCCCCcEEEcCCCCCCCCCCcccCc-----cccceeEecCceeeecCCCCCCCccccc
Q 010131 1 MARCALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPDMSRL-----IDLRIVHLENNELTGSLPSYMGSLPNLQ 73 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~--~~l~~L~~L~l~~N~l~~~~p~~~~l-----~~L~~l~l~~n~l~~~~p~~~~~l~~L~ 73 (517)
|++|+|++|++++.+|..+ ..+++|+.|+|++|++++.++.+..+ ++|+.|+|++|++++..|..++.+++|+
T Consensus 97 L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 176 (312)
T 1wwl_A 97 LQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALS 176 (312)
T ss_dssp CCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCC
T ss_pred ccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCC
Confidence 5677888888887777765 67788888888888888773236666 7788888888888766667777888888
Q ss_pred ccccccccccCC
Q 010131 74 ELHIENNSFVGE 85 (517)
Q Consensus 74 ~l~l~~N~l~~~ 85 (517)
.|++++|++.|.
T Consensus 177 ~L~Ls~N~l~~~ 188 (312)
T 1wwl_A 177 TLDLSDNPELGE 188 (312)
T ss_dssp EEECCSCTTCHH
T ss_pred EEECCCCCcCcc
Confidence 888888877654
No 333
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.06 E-value=2.7e-10 Score=121.27 Aligned_cols=82 Identities=20% Similarity=0.101 Sum_probs=39.7
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
++|+|++|++++..|..|.++++|+.|+|++|.+++.+|. |.++++|+.|+|++|.+++..|..|+++++|++|++++|
T Consensus 35 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n 114 (606)
T 3vq2_A 35 KNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVET 114 (606)
T ss_dssp CEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTS
T ss_pred CEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCC
Confidence 4445555555444444444455555555555555544443 444455555555555544333444444444444444444
Q ss_pred ccc
Q 010131 81 SFV 83 (517)
Q Consensus 81 ~l~ 83 (517)
.++
T Consensus 115 ~l~ 117 (606)
T 3vq2_A 115 KLA 117 (606)
T ss_dssp CCC
T ss_pred ccc
Confidence 444
No 334
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.05 E-value=1.2e-10 Score=123.86 Aligned_cols=87 Identities=20% Similarity=0.187 Sum_probs=47.6
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCC---CCc-ccCccccceeEecCceeeecCCCCCCCcccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP---LPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELH 76 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~---~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~ 76 (517)
|+.|+|++|.+++..|..|..+++|+.|+|++|.+++. .+. +..+++|+.|+|++|++++..|..+..+++|+.|+
T Consensus 427 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 506 (606)
T 3t6q_A 427 LKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVD 506 (606)
T ss_dssp CCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred CCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEE
Confidence 45566666666655555555566666666666665542 112 55555555555555555555555555555555555
Q ss_pred cccccccCCCC
Q 010131 77 IENNSFVGEIP 87 (517)
Q Consensus 77 l~~N~l~~~~P 87 (517)
+++|++++..|
T Consensus 507 Ls~N~l~~~~~ 517 (606)
T 3t6q_A 507 LSHNRLTSSSI 517 (606)
T ss_dssp CCSSCCCGGGG
T ss_pred CCCCccCcCCh
Confidence 55555554333
No 335
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.05 E-value=2.7e-10 Score=120.20 Aligned_cols=102 Identities=24% Similarity=0.327 Sum_probs=65.0
Q ss_pred ceecCCCCcccccCCcc-ccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPE-LKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~-~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
+.|+|++|++++.+|.. +..+++|+.|+|++|.+++.+|. +. ++|+.|+|++|+++ .+|..+..+++|+.|++++
T Consensus 406 ~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~ 482 (562)
T 3a79_B 406 ETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVAS 482 (562)
T ss_dssp CEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCS
T ss_pred CEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCC
Confidence 34444444444433332 33444444444444444443333 22 57777777788777 7888777888899999999
Q ss_pred ccccCCCCcccc---ccceeeeccCCCcccc
Q 010131 80 NSFVGEIPPALL---TGKVIFKYDNNPKLHK 107 (517)
Q Consensus 80 N~l~~~~P~~~~---~~~~~~~~~~n~~~~~ 107 (517)
|+++ .+|...+ .....+.+.+||+.|.
T Consensus 483 N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~ 512 (562)
T 3a79_B 483 NQLK-SVPDGVFDRLTSLQYIWLHDNPWDCT 512 (562)
T ss_dssp SCCC-CCCTTSTTTCTTCCCEECCSCCBCCC
T ss_pred CCCC-CCCHHHHhcCCCCCEEEecCCCcCCC
Confidence 9998 7887632 2455677889998886
No 336
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.05 E-value=2.3e-10 Score=110.78 Aligned_cols=83 Identities=17% Similarity=0.220 Sum_probs=40.5
Q ss_pred CceecCCCCcccccCC-ccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeee-cCCCCCCCccccccccc
Q 010131 1 MARCALSGKNLKGEIP-PELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTG-SLPSYMGSLPNLQELHI 77 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p-~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~-~~p~~~~~l~~L~~l~l 77 (517)
|+.|+|++|++++..+ ..+..+++|+.|+|++|.+++.+|. +..+++|+.|+|++|.+++ .+|..+..+++|+.|++
T Consensus 103 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L 182 (306)
T 2z66_A 103 LEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDL 182 (306)
T ss_dssp CCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEEC
T ss_pred CCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEEC
Confidence 3445555555553322 2444455555555555555554444 4445555555555555543 34444445555555555
Q ss_pred cccccc
Q 010131 78 ENNSFV 83 (517)
Q Consensus 78 ~~N~l~ 83 (517)
++|+++
T Consensus 183 s~n~l~ 188 (306)
T 2z66_A 183 SQCQLE 188 (306)
T ss_dssp TTSCCC
T ss_pred CCCCcC
Confidence 555554
No 337
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.04 E-value=4.8e-10 Score=112.51 Aligned_cols=103 Identities=18% Similarity=0.211 Sum_probs=82.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCC-CCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~-~~~l~~L~~l~l~ 78 (517)
|++|+|++|++++..|..|..+++|+.|+|++|.+++.+|. |..+++|+.|+|++|.++ .+|.. +..+++|++|+++
T Consensus 71 L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~l~~L~~L~L~ 149 (390)
T 3o6n_A 71 VELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMS 149 (390)
T ss_dssp CSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccC-cCCHHHhcCCCCCcEEECC
Confidence 67899999999977777889999999999999999998887 889999999999999999 66665 5889999999999
Q ss_pred cccccCCCCcccc--ccceeeeccCCCc
Q 010131 79 NNSFVGEIPPALL--TGKVIFKYDNNPK 104 (517)
Q Consensus 79 ~N~l~~~~P~~~~--~~~~~~~~~~n~~ 104 (517)
+|++++..|..+. ..+..+.+.+|..
T Consensus 150 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l 177 (390)
T 3o6n_A 150 NNNLERIEDDTFQATTSLQNLQLSSNRL 177 (390)
T ss_dssp SSCCCBCCTTTTSSCTTCCEEECCSSCC
T ss_pred CCccCccChhhccCCCCCCEEECCCCcC
Confidence 9999854444333 2445566666643
No 338
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.03 E-value=3.5e-10 Score=116.70 Aligned_cols=103 Identities=22% Similarity=0.243 Sum_probs=78.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++..|..|.++++|+.|+|++|.+++..|. |.++++|+.|+|++|++++..+..|..+++|+.|++++
T Consensus 34 l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 113 (477)
T 2id5_A 34 TRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISE 113 (477)
T ss_dssp CSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTT
T ss_pred CcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCC
Confidence 56788888888877777888888888888888888888776 88888888888888888844334577888888888888
Q ss_pred ccccCCCCccccc--cceeeeccCCC
Q 010131 80 NSFVGEIPPALLT--GKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~~~P~~~~~--~~~~~~~~~n~ 103 (517)
|++++..|..+.. .+..+.+.+|.
T Consensus 114 n~i~~~~~~~~~~l~~L~~L~l~~n~ 139 (477)
T 2id5_A 114 NKIVILLDYMFQDLYNLKSLEVGDND 139 (477)
T ss_dssp SCCCEECTTTTTTCTTCCEEEECCTT
T ss_pred CccccCChhHccccccCCEEECCCCc
Confidence 8888554544432 34455566654
No 339
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.03 E-value=1.1e-10 Score=113.86 Aligned_cols=103 Identities=20% Similarity=0.166 Sum_probs=52.7
Q ss_pred ceecCCCCcccccCCcccc-CCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
+.|+|++|++++..|..+. .+++|+.|+|++|.|++. |....+++|+.|+|++|+++ .+|..+..+++|+.|++++|
T Consensus 147 ~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 147 QYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA-FMGPEFQSAAGVTWISLRNN 224 (317)
T ss_dssp EEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-EECGGGGGGTTCSEEECTTS
T ss_pred CEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-cchhhhcccCcccEEECcCC
Confidence 3444444444443343332 344555555555555443 22223555666666666665 34444556666666666666
Q ss_pred cccCCCCccccc--cceeeeccCCCcccc
Q 010131 81 SFVGEIPPALLT--GKVIFKYDNNPKLHK 107 (517)
Q Consensus 81 ~l~~~~P~~~~~--~~~~~~~~~n~~~~~ 107 (517)
+++ .+|..+.. ....+.+.+|++.|.
T Consensus 225 ~l~-~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 225 KLV-LIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp CCC-EECTTCCCCTTCCEEECTTCCCBHH
T ss_pred ccc-chhhHhhcCCCCCEEEccCCCccCc
Confidence 666 45554322 344555666665543
No 340
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.02 E-value=3.7e-10 Score=120.16 Aligned_cols=103 Identities=15% Similarity=-0.038 Sum_probs=80.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
++.|+|++|++++..|..|+++++|++|+|++|.+++..|. |.++++|+.|+|++|++++..|..++.+++|++|++++
T Consensus 35 l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~ 114 (606)
T 3t6q_A 35 TECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQ 114 (606)
T ss_dssp CCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTT
T ss_pred CcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccc
Confidence 57888999999877788888899999999999998888786 88889999999999988877788888888888888888
Q ss_pred ccccCCCCcccc--ccceeeeccCCC
Q 010131 80 NSFVGEIPPALL--TGKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~~~P~~~~--~~~~~~~~~~n~ 103 (517)
|++++..|..+. ..+..+.+.+|.
T Consensus 115 n~i~~l~~~~~~~l~~L~~L~L~~n~ 140 (606)
T 3t6q_A 115 TGISSIDFIPLHNQKTLESLYLGSNH 140 (606)
T ss_dssp SCCSCGGGSCCTTCTTCCEEECCSSC
T ss_pred cCcccCCcchhccCCcccEEECCCCc
Confidence 888842233332 234455555553
No 341
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.01 E-value=1.8e-10 Score=121.05 Aligned_cols=103 Identities=19% Similarity=0.209 Sum_probs=73.6
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..|..|.++++|++|+|++|++++.+|+ |..+++|++|+|++|++++..|..++.+++|++|++++
T Consensus 28 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~ 107 (549)
T 2z81_A 28 MKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMG 107 (549)
T ss_dssp CCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTT
T ss_pred ccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCC
Confidence 56788888888877777788888888888888888887776 88888888888888888855555577888888888888
Q ss_pred ccccC-CCCccccc--cceeeeccCCC
Q 010131 80 NSFVG-EIPPALLT--GKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~-~~P~~~~~--~~~~~~~~~n~ 103 (517)
|++++ .+|..+.. .+..+.+.+|.
T Consensus 108 n~l~~~~~~~~~~~l~~L~~L~L~~n~ 134 (549)
T 2z81_A 108 NPYQTLGVTSLFPNLTNLQTLRIGNVE 134 (549)
T ss_dssp CCCSSSCSSCSCTTCTTCCEEEEEESS
T ss_pred CcccccchhhhhhccCCccEEECCCCc
Confidence 88774 23443322 33444444443
No 342
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.01 E-value=4.9e-10 Score=120.95 Aligned_cols=89 Identities=20% Similarity=0.235 Sum_probs=52.5
Q ss_pred ccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccccccCCCCcc-c---ccc
Q 010131 19 LKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPA-L---LTG 93 (517)
Q Consensus 19 ~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~P~~-~---~~~ 93 (517)
|.++++|+.|+|++|+|+..++. |.++++|+.|+|++|++++..+..+..+++|+.|++++|++++ +|+. + ...
T Consensus 532 ~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~~~~~ 610 (680)
T 1ziw_A 532 LKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITS-VEKKVFGPAFRN 610 (680)
T ss_dssp TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCB-CCHHHHHHHHTT
T ss_pred hcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCc-cChhHhcccccc
Confidence 34445555555555555544443 6666666666666666663333335566666666666666663 3332 1 234
Q ss_pred ceeeeccCCCccccc
Q 010131 94 KVIFKYDNNPKLHKE 108 (517)
Q Consensus 94 ~~~~~~~~n~~~~~~ 108 (517)
...+.+.+||+.|..
T Consensus 611 L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 611 LTELDMRFNPFDCTC 625 (680)
T ss_dssp CSEEECTTCCCCBCC
T ss_pred cCEEEccCCCcccCC
Confidence 556778899999874
No 343
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.00 E-value=4e-10 Score=118.84 Aligned_cols=80 Identities=19% Similarity=0.226 Sum_probs=50.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++..|..|.++++|+.|+|++|+|++..|+ |.++++|++|+|++|+++ .+|.. .+++|++|++++
T Consensus 54 L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~ 130 (562)
T 3a79_B 54 TKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSF 130 (562)
T ss_dssp CCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCS
T ss_pred cCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCC
Confidence 45566666666654445666666666666666666666555 666666666666666666 55554 566666666666
Q ss_pred cccc
Q 010131 80 NSFV 83 (517)
Q Consensus 80 N~l~ 83 (517)
|+++
T Consensus 131 N~l~ 134 (562)
T 3a79_B 131 NDFD 134 (562)
T ss_dssp SCCS
T ss_pred CCcc
Confidence 6666
No 344
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.00 E-value=2.5e-10 Score=106.28 Aligned_cols=101 Identities=20% Similarity=0.267 Sum_probs=84.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCC-CCCCCCc-ccCccccceeEecC-ceeeecCCCCCCCccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGPLPD-MSRLIDLRIVHLEN-NELTGSLPSYMGSLPNLQELHI 77 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~-l~~~~p~-~~~l~~L~~l~l~~-n~l~~~~p~~~~~l~~L~~l~l 77 (517)
|+.|+|++|++++..+..|.++++|+.|+|++|. +++..+. |.++++|+.|+|++ |++++..|..+..+++|+.|++
T Consensus 33 l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l 112 (239)
T 2xwt_C 33 TQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGI 112 (239)
T ss_dssp CCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEE
T ss_pred ccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeC
Confidence 5789999999997666689999999999999997 8888885 99999999999999 9999666677889999999999
Q ss_pred ccccccCCCCccccc--cce---eeeccCCC
Q 010131 78 ENNSFVGEIPPALLT--GKV---IFKYDNNP 103 (517)
Q Consensus 78 ~~N~l~~~~P~~~~~--~~~---~~~~~~n~ 103 (517)
++|+++ .+|. +.. ... .+.+.+|+
T Consensus 113 ~~n~l~-~lp~-~~~l~~L~~L~~L~l~~N~ 141 (239)
T 2xwt_C 113 FNTGLK-MFPD-LTKVYSTDIFFILEITDNP 141 (239)
T ss_dssp EEECCC-SCCC-CTTCCBCCSEEEEEEESCT
T ss_pred CCCCCc-cccc-cccccccccccEEECCCCc
Confidence 999999 4886 221 223 56667763
No 345
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.00 E-value=2.3e-10 Score=119.41 Aligned_cols=103 Identities=15% Similarity=0.167 Sum_probs=76.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCC--CCCc-ccCccccceeEecCceeeecCCCC-CCCcccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTG--PLPD-MSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELH 76 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~--~~p~-~~~l~~L~~l~l~~n~l~~~~p~~-~~~l~~L~~l~ 76 (517)
|+.|+|++|++++.+|..++++++|+.|+|++|++++ .+|. +..+++|+.|+|++|.+++.+|.. +..+++|+.|+
T Consensus 326 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~ 405 (520)
T 2z7x_B 326 FLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLN 405 (520)
T ss_dssp CCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEE
T ss_pred ccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEE
Confidence 5678888888887778788888888888888888886 3444 778888888888888888656654 66777888888
Q ss_pred cccccccCCCCccccccceeeeccCCC
Q 010131 77 IENNSFVGEIPPALLTGKVIFKYDNNP 103 (517)
Q Consensus 77 l~~N~l~~~~P~~~~~~~~~~~~~~n~ 103 (517)
+++|++++.+|..+......+.+.+|.
T Consensus 406 Ls~N~l~~~~~~~l~~~L~~L~Ls~N~ 432 (520)
T 2z7x_B 406 MSSNILTDTIFRCLPPRIKVLDLHSNK 432 (520)
T ss_dssp CCSSCCCGGGGGSCCTTCCEEECCSSC
T ss_pred CcCCCCCcchhhhhcccCCEEECCCCc
Confidence 888888777766655455555566653
No 346
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.99 E-value=5e-10 Score=114.29 Aligned_cols=102 Identities=20% Similarity=0.169 Sum_probs=82.6
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
++.|+|++|++++..+..|.++++|+.|+|++|.|++..+. |.++++|+.|+|++|++++..+..+..+++|+.|++++
T Consensus 66 l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 145 (440)
T 3zyj_A 66 TRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRN 145 (440)
T ss_dssp CSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCS
T ss_pred CcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCC
Confidence 57899999999987788899999999999999999988876 99999999999999999944445688999999999999
Q ss_pred ccccCCCCccccc---cceeeeccCCC
Q 010131 80 NSFVGEIPPALLT---GKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~~~P~~~~~---~~~~~~~~~n~ 103 (517)
|+++ .+|+..+. .+..+.+.+|.
T Consensus 146 N~i~-~~~~~~~~~l~~L~~L~l~~~~ 171 (440)
T 3zyj_A 146 NPIE-SIPSYAFNRIPSLRRLDLGELK 171 (440)
T ss_dssp CCCC-EECTTTTTTCTTCCEEECCCCT
T ss_pred Cccc-ccCHHHhhhCcccCEeCCCCCC
Confidence 9998 56654332 34445555543
No 347
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=98.99 E-value=2e-10 Score=119.85 Aligned_cols=81 Identities=16% Similarity=0.162 Sum_probs=43.5
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++..|..|.++++|+.|+|++|++++.+|+ |.++++|++|+|++|+++ .+|.. .+++|++|++++
T Consensus 23 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~ 99 (520)
T 2z7x_B 23 TTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSF 99 (520)
T ss_dssp CSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCS
T ss_pred ccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccC
Confidence 34555555555544444555555555555555555555443 555555555555555555 44444 455555555555
Q ss_pred ccccC
Q 010131 80 NSFVG 84 (517)
Q Consensus 80 N~l~~ 84 (517)
|++++
T Consensus 100 N~l~~ 104 (520)
T 2z7x_B 100 NAFDA 104 (520)
T ss_dssp SCCSS
T ss_pred Ccccc
Confidence 55553
No 348
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=98.99 E-value=3.4e-10 Score=102.11 Aligned_cols=100 Identities=15% Similarity=0.205 Sum_probs=85.5
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|+++ .+| .+..+++|+.|++++|.++. ++.+..+++|+.|++++|.+++..|..++.+++|+.|++++|
T Consensus 46 L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~-~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n 122 (197)
T 4ezg_A 46 LTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN-YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHS 122 (197)
T ss_dssp CCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC-CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSS
T ss_pred ccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc-chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCC
Confidence 678999999999 778 69999999999999997764 456999999999999999999888999999999999999999
Q ss_pred cccCCCCccccc--cceeeeccCCC
Q 010131 81 SFVGEIPPALLT--GKVIFKYDNNP 103 (517)
Q Consensus 81 ~l~~~~P~~~~~--~~~~~~~~~n~ 103 (517)
++++..|..+.. .+..+.+.+|.
T Consensus 123 ~i~~~~~~~l~~l~~L~~L~L~~n~ 147 (197)
T 4ezg_A 123 AHDDSILTKINTLPKVNSIDLSYNG 147 (197)
T ss_dssp BCBGGGHHHHTTCSSCCEEECCSCT
T ss_pred ccCcHhHHHHhhCCCCCEEEccCCC
Confidence 999766765543 45556666665
No 349
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=98.98 E-value=8.1e-10 Score=108.28 Aligned_cols=97 Identities=30% Similarity=0.350 Sum_probs=52.9
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
+.+++++|+++ .+|..+. ++|+.|+|++|.+++.+|. |.++++|+.|+|++|++++..|..++.+++|++|++++|
T Consensus 36 ~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 36 RVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred CEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 44555555555 4554442 4555555555555555553 555555555555555555444555555555555555555
Q ss_pred cccCCCCccccccceeeeccCC
Q 010131 81 SFVGEIPPALLTGKVIFKYDNN 102 (517)
Q Consensus 81 ~l~~~~P~~~~~~~~~~~~~~n 102 (517)
+++ .+|..+...+..+.+.+|
T Consensus 113 ~l~-~l~~~~~~~L~~L~l~~n 133 (332)
T 2ft3_A 113 HLV-EIPPNLPSSLVELRIHDN 133 (332)
T ss_dssp CCC-SCCSSCCTTCCEEECCSS
T ss_pred cCC-ccCccccccCCEEECCCC
Confidence 555 455554444444444444
No 350
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.98 E-value=3.1e-10 Score=112.25 Aligned_cols=100 Identities=24% Similarity=0.245 Sum_probs=71.3
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCC-CCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSY-MGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~-~~~l~~L~~l~l~ 78 (517)
|++|+|++|++++..+..|.++++|+.|+|++|.+++.+|. |.++++|+.|+|++|+++ .+|.. +..+++|++|+++
T Consensus 54 L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 54 VKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECT
T ss_pred CcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECC
Confidence 56788888888865555777888888888888888887776 788888888888888887 45544 7778888888888
Q ss_pred cccccCCCCc-ccc---ccceeeeccCC
Q 010131 79 NNSFVGEIPP-ALL---TGKVIFKYDNN 102 (517)
Q Consensus 79 ~N~l~~~~P~-~~~---~~~~~~~~~~n 102 (517)
+|+++ .+|. ..+ ..+..+.+.+|
T Consensus 133 ~n~l~-~l~~~~~~~~l~~L~~L~l~~n 159 (353)
T 2z80_A 133 GNPYK-TLGETSLFSHLTKLQILRVGNM 159 (353)
T ss_dssp TCCCS-SSCSSCSCTTCTTCCEEEEEES
T ss_pred CCCCc-ccCchhhhccCCCCcEEECCCC
Confidence 88887 5665 222 23344455555
No 351
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=98.95 E-value=3.7e-10 Score=116.73 Aligned_cols=59 Identities=29% Similarity=0.336 Sum_probs=51.6
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeee
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTG 60 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~ 60 (517)
|+.|+|++|++++..|..|..+++|+.|+|++|.+++.+| |..+++|+.|+|++|.|++
T Consensus 36 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~-l~~l~~L~~L~Ls~N~l~~ 94 (487)
T 3oja_A 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQE 94 (487)
T ss_dssp CCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE-CTTCTTCCEEECCSSEEEE
T ss_pred ccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc-cccCCCCCEEEecCCcCCC
Confidence 6789999999998777889999999999999999998776 8888888888888888774
No 352
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=98.95 E-value=2.5e-10 Score=110.92 Aligned_cols=86 Identities=17% Similarity=0.202 Sum_probs=48.7
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCC---CCcc--cCccccceeEecCceeee--cCCC-CCCCcccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP---LPDM--SRLIDLRIVHLENNELTG--SLPS-YMGSLPNL 72 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~---~p~~--~~l~~L~~l~l~~n~l~~--~~p~-~~~~l~~L 72 (517)
|++|+|++|++++..|..|+++++|+.|+|++|++++. ++.+ ..+++|+.|+|++|++++ .++. .+..+++|
T Consensus 151 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L 230 (312)
T 1wwl_A 151 LKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQL 230 (312)
T ss_dssp CCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCC
T ss_pred CcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCC
Confidence 56777777777766666777777777777777776654 1122 555555555555555551 1111 12234455
Q ss_pred cccccccccccCCC
Q 010131 73 QELHIENNSFVGEI 86 (517)
Q Consensus 73 ~~l~l~~N~l~~~~ 86 (517)
+.|++++|++++..
T Consensus 231 ~~L~Ls~N~l~~~~ 244 (312)
T 1wwl_A 231 QGLDLSHNSLRDAA 244 (312)
T ss_dssp SEEECTTSCCCSSC
T ss_pred CEEECCCCcCCccc
Confidence 55555555555433
No 353
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.95 E-value=5.2e-10 Score=108.51 Aligned_cols=102 Identities=16% Similarity=0.188 Sum_probs=60.1
Q ss_pred CceecCCCCccccc--CC--ccccCCCCCcEEEcCCCCCCCCCC---c-ccCccccceeEecCceeeecCCCCCCCc---
Q 010131 1 MARCALSGKNLKGE--IP--PELKNMEALTELWLDGNFLTGPLP---D-MSRLIDLRIVHLENNELTGSLPSYMGSL--- 69 (517)
Q Consensus 1 l~~L~l~~n~~~~~--~p--~~~~~l~~L~~L~l~~N~l~~~~p---~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l--- 69 (517)
|+.|+|++|++.+. ++ ..+..+++|+.|+|++|+++...+ . +..+++|+.|+|++|++++.+|..++.+
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 56677777776542 21 223456666667777766654322 1 3456666666666666665556655555
Q ss_pred ccccccccccccccCCCCccccccceeeeccCCC
Q 010131 70 PNLQELHIENNSFVGEIPPALLTGKVIFKYDNNP 103 (517)
Q Consensus 70 ~~L~~l~l~~N~l~~~~P~~~~~~~~~~~~~~n~ 103 (517)
++|+.|++++|+++ .+|..+...+..+.+++|.
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~~~~L~~L~Ls~N~ 283 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGLPAKLRVLDLSSNR 283 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCCCSCCSCEECCSCC
T ss_pred CcCCEEECCCCCCC-chhhhhcCCCCEEECCCCc
Confidence 46666666666666 5666655545555555553
No 354
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=98.95 E-value=8.1e-10 Score=122.16 Aligned_cols=89 Identities=19% Similarity=0.198 Sum_probs=66.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCC-Cc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPL-PD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~-p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
|+.|+|++|.|++..|..|.++++|+.|+|++|.+.+.+ |. |.++++|++|+|++|.+++..|..|+++++|++|+++
T Consensus 26 l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 105 (844)
T 3j0a_A 26 TERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLY 105 (844)
T ss_dssp CCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECT
T ss_pred cCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCc
Confidence 567888888888777777777777777777777665555 44 7777777777777777776677777777777777777
Q ss_pred cccccCCCCcc
Q 010131 79 NNSFVGEIPPA 89 (517)
Q Consensus 79 ~N~l~~~~P~~ 89 (517)
+|.+++.+|..
T Consensus 106 ~n~l~~~~~~~ 116 (844)
T 3j0a_A 106 FCGLSDAVLKD 116 (844)
T ss_dssp TCCCSSCCSTT
T ss_pred CCCCCcccccC
Confidence 77777655553
No 355
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=98.95 E-value=9.9e-10 Score=118.59 Aligned_cols=83 Identities=17% Similarity=0.131 Sum_probs=37.7
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
+.|+|++|++++..|..|+++++|+.|+|++|.+++.++. |.++++|+.|+|++|++++..|..++++++|++|++++|
T Consensus 52 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n 131 (680)
T 1ziw_A 52 TSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHN 131 (680)
T ss_dssp SEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSS
T ss_pred cEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCC
Confidence 3444444444444444444444444444444444444433 444444444444444444333334444444444444444
Q ss_pred cccC
Q 010131 81 SFVG 84 (517)
Q Consensus 81 ~l~~ 84 (517)
.+++
T Consensus 132 ~l~~ 135 (680)
T 1ziw_A 132 GLSS 135 (680)
T ss_dssp CCSC
T ss_pred cccc
Confidence 4443
No 356
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=98.94 E-value=1.3e-09 Score=114.88 Aligned_cols=87 Identities=16% Similarity=0.073 Sum_probs=59.9
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.|+|++|++++..|..|.++++|+.|+|++|++++.+|. |.++++|+.|+|++|.+++..|..|..+++|++|++++
T Consensus 30 l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 109 (570)
T 2z63_A 30 TKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVE 109 (570)
T ss_dssp CCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTT
T ss_pred ccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccc
Confidence 45677777777766666677777777777777777776665 77777777777777777755556666677777777777
Q ss_pred ccccCCCCc
Q 010131 80 NSFVGEIPP 88 (517)
Q Consensus 80 N~l~~~~P~ 88 (517)
|+++ .+|.
T Consensus 110 n~l~-~l~~ 117 (570)
T 2z63_A 110 TNLA-SLEN 117 (570)
T ss_dssp SCCC-CSTT
T ss_pred cccc-cCCC
Confidence 7666 3443
No 357
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.93 E-value=1.6e-10 Score=111.88 Aligned_cols=183 Identities=22% Similarity=0.246 Sum_probs=120.5
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-CCC--ccccceeeecCC---eeEEEEEecC
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRN--LVPLIGYCEEEH---QRILVYEYMH 274 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~n--iv~~~~~~~~~~---~~~lv~e~~~ 274 (517)
+.++.|.+..||+.. ..+++|+.... .....+.+|.++++.+. +.. +.+++......+ ..++||++++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 458899999999874 46889986432 34567889999998883 332 334444433333 3478999999
Q ss_pred CCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcC-----------------------------------------
Q 010131 275 NGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG----------------------------------------- 313 (517)
Q Consensus 275 ~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~----------------------------------------- 313 (517)
|.++.+... ..++..++..++.++++.++.||+.
T Consensus 100 G~~l~~~~~-----~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 174 (304)
T 3sg8_A 100 GVPLTPLLL-----NNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVD 174 (304)
T ss_dssp CEECCHHHH-----HTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHH
T ss_pred CeECCcccc-----ccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHH
Confidence 988765332 2356677778888888888888851
Q ss_pred --------------CCCCcEecCCCCCCeEeCC--CCcEEEccccCccccCCCCcccccccccCCCC---cCCCccC---
Q 010131 314 --------------CNPGIIHRDVKSSNILLDI--NMRAKVSDFGLSRQAEEDLTHISSVARGTVGY---LDPEYYG--- 371 (517)
Q Consensus 314 --------------~~~~ivH~dlk~~Nill~~--~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y---~aPE~~~--- 371 (517)
....++|||++|.||++++ +..+.|.||+.+........-. . ...+ ..|+...
T Consensus 175 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~~~~~Dl~-~----~~~~~~~~~~~~~~~~l 249 (304)
T 3sg8_A 175 DFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAISDPDNDFI-S----LMEDDEEYGMEFVSKIL 249 (304)
T ss_dssp HHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEECTTHHHH-T----TCCTTTSCCHHHHHHHH
T ss_pred HHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccCChHHHHH-H----HHhhccccCHHHHHHHH
Confidence 1145799999999999998 5568899999886532211100 0 0000 1222110
Q ss_pred ---CC--------CCCccceehhHHHHHHHHHhCCCCCC
Q 010131 372 ---NQ--------QLTEKSDVYSFGVVLLELISGKKPVS 399 (517)
Q Consensus 372 ---~~--------~~~~~~Dv~slG~~l~elltg~~p~~ 399 (517)
+. ......+.|+++.++|.+.+|..+|.
T Consensus 250 ~~Y~~~~~~~~~~r~~~~~~~~~l~~~~~~~~~g~~~~~ 288 (304)
T 3sg8_A 250 NHYKHKDIPTVLEKYRMKEKYWSFEKIIYGKEYGYMDWY 288 (304)
T ss_dssp HHHTCSCHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 00 01123689999999999999987763
No 358
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=98.93 E-value=7.7e-10 Score=116.21 Aligned_cols=103 Identities=19% Similarity=0.190 Sum_probs=85.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeee-cCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTG-SLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~-~~p~~~~~l~~L~~l~l~ 78 (517)
|++|+|++|++++..|..|+++++|+.|+|++|.+++.+|. |+++++|+.|+|++|.+++ .+|..++++++|+.|+++
T Consensus 52 L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~ 131 (549)
T 2z81_A 52 LQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIG 131 (549)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEE
T ss_pred ccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECC
Confidence 68899999999988888999999999999999999999988 9999999999999999986 467789999999999999
Q ss_pred cccccCCCCccccc---cceeeeccCCC
Q 010131 79 NNSFVGEIPPALLT---GKVIFKYDNNP 103 (517)
Q Consensus 79 ~N~l~~~~P~~~~~---~~~~~~~~~n~ 103 (517)
+|++.+.+|+..+. ....+.+.+|.
T Consensus 132 ~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 132 NVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp ESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred CCccccccCHhhhhcccccCeeeccCCc
Confidence 99966578754332 33445555554
No 359
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=98.93 E-value=2.2e-09 Score=105.01 Aligned_cols=99 Identities=21% Similarity=0.278 Sum_probs=81.5
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|+.+++++++++ .+|..+. ++|+.|+|++|.+++.++. |.++++|+.|+|++|.+++..|..+..+++|++|++++
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 467888888888 6787664 6888999999999988885 88899999999999999877788888899999999999
Q ss_pred ccccCCCCccccccceeeeccCCC
Q 010131 80 NSFVGEIPPALLTGKVIFKYDNNP 103 (517)
Q Consensus 80 N~l~~~~P~~~~~~~~~~~~~~n~ 103 (517)
|+++ .+|..+...+..+.+.+|.
T Consensus 110 n~l~-~l~~~~~~~L~~L~l~~n~ 132 (330)
T 1xku_A 110 NQLK-ELPEKMPKTLQELRVHENE 132 (330)
T ss_dssp SCCS-BCCSSCCTTCCEEECCSSC
T ss_pred CcCC-ccChhhcccccEEECCCCc
Confidence 9988 7888777666677777664
No 360
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=98.92 E-value=1e-09 Score=108.59 Aligned_cols=101 Identities=19% Similarity=0.234 Sum_probs=83.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCC--CCCCccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPS--YMGSLPNLQELHI 77 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~--~~~~l~~L~~l~l 77 (517)
|+.|+|++|++++..|..|.++++|+.|+|++|++++.++. |..+++|+.|+|++|+++ .+|. .+..+++|+.|++
T Consensus 78 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L~l 156 (353)
T 2z80_A 78 LQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQILRV 156 (353)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEEEE
T ss_pred CCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEEEC
Confidence 68899999999987788899999999999999999988877 899999999999999999 6776 6889999999999
Q ss_pred cccc-ccCCCCcc-ccc--cceeeeccCCC
Q 010131 78 ENNS-FVGEIPPA-LLT--GKVIFKYDNNP 103 (517)
Q Consensus 78 ~~N~-l~~~~P~~-~~~--~~~~~~~~~n~ 103 (517)
++|+ +. .+|+. +.. ....+.+.+|.
T Consensus 157 ~~n~~~~-~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 157 GNMDTFT-KIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp EESSSCC-EECTTTTTTCCEEEEEEEEETT
T ss_pred CCCcccc-ccCHHHccCCCCCCEEECCCCC
Confidence 9995 66 55543 322 34445556654
No 361
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=98.90 E-value=1.3e-09 Score=105.82 Aligned_cols=103 Identities=17% Similarity=0.185 Sum_probs=84.2
Q ss_pred CceecCCCCcccccCCccc--cCCCCCcEEEcCCCCCCCCCCc-----ccCccccceeEecCceeeecCCCCCCCccccc
Q 010131 1 MARCALSGKNLKGEIPPEL--KNMEALTELWLDGNFLTGPLPD-----MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQ 73 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~--~~l~~L~~L~l~~N~l~~~~p~-----~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~ 73 (517)
|++|+|++|++++..|..+ ..+++|+.|+|++|.+++..+. +..+++|+.|+|++|++++..|..++.+++|+
T Consensus 93 L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~ 172 (310)
T 4glp_A 93 LKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALT 172 (310)
T ss_dssp CCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCC
T ss_pred eeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCC
Confidence 6889999999999999988 8899999999999999997762 45799999999999999977788899999999
Q ss_pred ccccccccccCC--CCccc----cccceeeeccCCC
Q 010131 74 ELHIENNSFVGE--IPPAL----LTGKVIFKYDNNP 103 (517)
Q Consensus 74 ~l~l~~N~l~~~--~P~~~----~~~~~~~~~~~n~ 103 (517)
+|++++|++.+. +|... ...+..+.+.+|.
T Consensus 173 ~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~ 208 (310)
T 4glp_A 173 SLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTG 208 (310)
T ss_dssp EEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSC
T ss_pred EEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCC
Confidence 999999998742 22221 2234455566653
No 362
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=98.90 E-value=1.3e-09 Score=101.37 Aligned_cols=99 Identities=18% Similarity=0.251 Sum_probs=62.5
Q ss_pred CceecCCCCcccccCCccccCCCCCc---EEEcCCC-CCCCCCCc-ccCccccc-eeEecCceeeecCCCCCCCcccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALT---ELWLDGN-FLTGPLPD-MSRLIDLR-IVHLENNELTGSLPSYMGSLPNLQE 74 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~---~L~l~~N-~l~~~~p~-~~~l~~L~-~l~l~~n~l~~~~p~~~~~l~~L~~ 74 (517)
|+.|+|++|++++ +|. |..+++|+ .|++++| .+++.++. |..+++|+ .|++++|+++ .+|......++|+.
T Consensus 107 L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~ 183 (239)
T 2xwt_C 107 LKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDA 183 (239)
T ss_dssp CCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEE
T ss_pred CCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCE
Confidence 4667777777774 665 66666666 7777777 77766665 77777777 7777777777 66655444467777
Q ss_pred ccccccc-ccCCCCcccc----ccceeeeccCCC
Q 010131 75 LHIENNS-FVGEIPPALL----TGKVIFKYDNNP 103 (517)
Q Consensus 75 l~l~~N~-l~~~~P~~~~----~~~~~~~~~~n~ 103 (517)
|++++|+ ++ .+|+..+ .....+.+.+|+
T Consensus 184 L~L~~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~ 216 (239)
T 2xwt_C 184 VYLNKNKYLT-VIDKDAFGGVYSGPSLLDVSQTS 216 (239)
T ss_dssp EECTTCTTCC-EECTTTTTTCSBCCSEEECTTCC
T ss_pred EEcCCCCCcc-cCCHHHhhccccCCcEEECCCCc
Confidence 7777774 66 4554432 223344455554
No 363
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=98.83 E-value=1.1e-09 Score=106.49 Aligned_cols=96 Identities=28% Similarity=0.322 Sum_probs=77.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|++|+|++|++++..|..|.++++|+.|+|++|.+++.+| +..+++|+.|+|++|++++ +| ..++|+.|++++|
T Consensus 36 L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-~~~l~~L~~L~Ls~n~l~~-l~----~~~~L~~L~l~~n 109 (317)
T 3o53_A 36 VKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-LESLSTLRTLDLNNNYVQE-LL----VGPSIETLHAANN 109 (317)
T ss_dssp CSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE-ETTCTTCCEEECCSSEEEE-EE----ECTTCCEEECCSS
T ss_pred CCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh-hhhcCCCCEEECcCCcccc-cc----CCCCcCEEECCCC
Confidence 6789999999997767789999999999999999998766 8899999999999999984 44 2378888888888
Q ss_pred cccCCCCccccccceeeeccCCC
Q 010131 81 SFVGEIPPALLTGKVIFKYDNNP 103 (517)
Q Consensus 81 ~l~~~~P~~~~~~~~~~~~~~n~ 103 (517)
+++ .+|...+.....+.+.+|.
T Consensus 110 ~l~-~~~~~~~~~L~~L~l~~N~ 131 (317)
T 3o53_A 110 NIS-RVSCSRGQGKKNIYLANNK 131 (317)
T ss_dssp CCS-EEEECCCSSCEEEECCSSC
T ss_pred ccC-CcCccccCCCCEEECCCCC
Confidence 888 4555545556667777765
No 364
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.83 E-value=4.1e-09 Score=102.09 Aligned_cols=82 Identities=26% Similarity=0.465 Sum_probs=53.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++ +| .+..+++|+.|+|++|.+++. +.+..+++|+.|++++|.++ .+|. +..+++|+.|++++|
T Consensus 87 L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~l~~n 161 (308)
T 1h6u_A 87 ITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITDV-TPLAGLSNLQVLYLDLNQIT-NISP-LAGLTNLQYLSIGNA 161 (308)
T ss_dssp CCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCCC-GGGTTCTTCCEEECCSSCCC-CCGG-GGGCTTCCEEECCSS
T ss_pred CCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCCc-hhhcCCCCCCEEECCCCccC-cCcc-ccCCCCccEEEccCC
Confidence 5667777777774 33 566777777777777777663 33666777777777777776 3333 666666777777777
Q ss_pred cccCCCCc
Q 010131 81 SFVGEIPP 88 (517)
Q Consensus 81 ~l~~~~P~ 88 (517)
+++ .+|+
T Consensus 162 ~l~-~~~~ 168 (308)
T 1h6u_A 162 QVS-DLTP 168 (308)
T ss_dssp CCC-CCGG
T ss_pred cCC-CChh
Confidence 666 3443
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.83 E-value=5.8e-09 Score=98.53 Aligned_cols=77 Identities=21% Similarity=0.331 Sum_probs=44.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|++++|+++ .+| .+..+++|+.|+|++|+|++.+| +..+++|+.|+|++|+++ .+|.... ++|+.|++++|
T Consensus 43 L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~-l~~l~~L~~L~L~~N~l~-~l~~~~~--~~L~~L~L~~N 116 (263)
T 1xeu_A 43 VQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP-LKDLTKLEELSVNRNRLK-NLNGIPS--ACLSRLFLDNN 116 (263)
T ss_dssp CSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG-GTTCSSCCEEECCSSCCS-CCTTCCC--SSCCEEECCSS
T ss_pred CcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh-hccCCCCCEEECCCCccC-CcCcccc--CcccEEEccCC
Confidence 455666666666 444 45566666666666666666544 666666666666666665 3443222 55555555555
Q ss_pred ccc
Q 010131 81 SFV 83 (517)
Q Consensus 81 ~l~ 83 (517)
+++
T Consensus 117 ~l~ 119 (263)
T 1xeu_A 117 ELR 119 (263)
T ss_dssp CCS
T ss_pred ccC
Confidence 555
No 366
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=98.83 E-value=1.9e-09 Score=104.37 Aligned_cols=97 Identities=25% Similarity=0.462 Sum_probs=71.5
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++ +|. +..+++|+.|+|++|.+++..+ +..+++|+.|+|++|+++ .+|. +..+++|+.|++++|
T Consensus 109 L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~l~-~~~~-l~~l~~L~~L~l~~n 183 (308)
T 1h6u_A 109 IKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISP-LAGLTNLQYLSIGNAQVS-DLTP-LANLSKLTTLKADDN 183 (308)
T ss_dssp CCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECCSSCCC-CCGG-GTTCTTCCEEECCSS
T ss_pred CCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcCcc-ccCCCCccEEEccCCcCC-CChh-hcCCCCCCEEECCCC
Confidence 5788888888885 453 8888888888888888887655 888888888888888888 4554 778888888888888
Q ss_pred cccCCCCc-cccccceeeeccCCC
Q 010131 81 SFVGEIPP-ALLTGKVIFKYDNNP 103 (517)
Q Consensus 81 ~l~~~~P~-~~~~~~~~~~~~~n~ 103 (517)
+++ .+|+ .-...+..+.+.+|.
T Consensus 184 ~l~-~~~~l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 184 KIS-DISPLASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CCC-CCGGGGGCTTCCEEECTTSC
T ss_pred ccC-cChhhcCCCCCCEEEccCCc
Confidence 888 4554 112244555566664
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=98.82 E-value=5.5e-09 Score=98.67 Aligned_cols=97 Identities=27% Similarity=0.334 Sum_probs=74.0
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++ +|. +.++++|+.|+|++|++++.. .+.. ++|+.|+|++|+++ .+| .+..+++|+.|++++|
T Consensus 65 L~~L~L~~N~i~~-~~~-l~~l~~L~~L~L~~N~l~~l~-~~~~-~~L~~L~L~~N~l~-~~~-~l~~l~~L~~L~Ls~N 138 (263)
T 1xeu_A 65 LKELHLSHNQISD-LSP-LKDLTKLEELSVNRNRLKNLN-GIPS-ACLSRLFLDNNELR-DTD-SLIHLKNLEILSIRNN 138 (263)
T ss_dssp CCEEECCSSCCCC-CGG-GTTCSSCCEEECCSSCCSCCT-TCCC-SSCCEEECCSSCCS-BSG-GGTTCTTCCEEECTTS
T ss_pred CCEEECCCCccCC-Chh-hccCCCCCEEECCCCccCCcC-cccc-CcccEEEccCCccC-CCh-hhcCcccccEEECCCC
Confidence 6789999999995 554 889999999999999999854 4333 88999999999988 454 4888899999999999
Q ss_pred cccCCCCcc-ccccceeeeccCCCc
Q 010131 81 SFVGEIPPA-LLTGKVIFKYDNNPK 104 (517)
Q Consensus 81 ~l~~~~P~~-~~~~~~~~~~~~n~~ 104 (517)
+++ .+|.- -...+..+.+.+|..
T Consensus 139 ~i~-~~~~l~~l~~L~~L~L~~N~i 162 (263)
T 1xeu_A 139 KLK-SIVMLGFLSKLEVLDLHGNEI 162 (263)
T ss_dssp CCC-BCGGGGGCTTCCEEECTTSCC
T ss_pred cCC-CChHHccCCCCCEEECCCCcC
Confidence 988 45531 123445566666653
No 368
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.82 E-value=2.2e-09 Score=105.82 Aligned_cols=100 Identities=18% Similarity=0.303 Sum_probs=65.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++ +|. +..+++|+.|++++|.+++. +.+..+++|+.|++++|.++ .+| .+..+++|+.|++++|
T Consensus 223 L~~L~l~~n~l~~-~~~-~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~l~~n~l~-~~~-~~~~l~~L~~L~L~~n 297 (347)
T 4fmz_A 223 LNSLKIGNNKITD-LSP-LANLSQLTWLEIGTNQISDI-NAVKDLTKLKMLNVGSNQIS-DIS-VLNNLSQLNSLFLNNN 297 (347)
T ss_dssp CCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSCCC-CCG-GGGGCTTCSEEECCSS
T ss_pred CCEEEccCCccCC-Ccc-hhcCCCCCEEECCCCccCCC-hhHhcCCCcCEEEccCCccC-CCh-hhcCCCCCCEEECcCC
Confidence 5677778887774 443 77777777777777777763 55777777777777777777 343 4667777777777777
Q ss_pred cccCCCCcccc--ccceeeeccCCCcc
Q 010131 81 SFVGEIPPALL--TGKVIFKYDNNPKL 105 (517)
Q Consensus 81 ~l~~~~P~~~~--~~~~~~~~~~n~~~ 105 (517)
++++..|..+. .....+.+.+|+..
T Consensus 298 ~l~~~~~~~l~~l~~L~~L~L~~n~l~ 324 (347)
T 4fmz_A 298 QLGNEDMEVIGGLTNLTTLFLSQNHIT 324 (347)
T ss_dssp CCCGGGHHHHHTCTTCSEEECCSSSCC
T ss_pred cCCCcChhHhhccccCCEEEccCCccc
Confidence 77754444332 23445566666543
No 369
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.81 E-value=4.4e-09 Score=100.97 Aligned_cols=78 Identities=31% Similarity=0.513 Sum_probs=53.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++ ++. +.++++|+.|+|++|.+++ +|.+..+++|+.|+|++|+++ .+ +.+..+++|+.|++++|
T Consensus 70 L~~L~L~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~-~~~l~~l~~L~~L~L~~n~i~-~~-~~l~~l~~L~~L~l~~n 144 (291)
T 1h6t_A 70 VTKLFLNGNKLTD-IKP-LANLKNLGWLFLDENKVKD-LSSLKDLKKLKSLSLEHNGIS-DI-NGLVHLPQLESLYLGNN 144 (291)
T ss_dssp CCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-GGGGTTCTTCCEEECTTSCCC-CC-GGGGGCTTCCEEECCSS
T ss_pred CCEEEccCCccCC-Ccc-cccCCCCCEEECCCCcCCC-ChhhccCCCCCEEECCCCcCC-CC-hhhcCCCCCCEEEccCC
Confidence 5677777777774 343 7777777777777777776 344777777777777777776 33 34666677777777777
Q ss_pred ccc
Q 010131 81 SFV 83 (517)
Q Consensus 81 ~l~ 83 (517)
+++
T Consensus 145 ~l~ 147 (291)
T 1h6t_A 145 KIT 147 (291)
T ss_dssp CCC
T ss_pred cCC
Confidence 776
No 370
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=98.80 E-value=3.5e-09 Score=101.67 Aligned_cols=97 Identities=26% Similarity=0.352 Sum_probs=63.7
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++ +| .+..+++|+.|+|++|++++. +.+..+++|+.|++++|++++ + ..+..+++|+.|++++|
T Consensus 92 L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~~-~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~N 166 (291)
T 1h6t_A 92 LGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISDI-NGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDN 166 (291)
T ss_dssp CCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCCC-GGGGGCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSS
T ss_pred CCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCCC-hhhcCCCCCCEEEccCCcCCc-c-hhhccCCCCCEEEccCC
Confidence 5677788887774 33 377777777777777777764 557777777777777777773 3 45677777777777777
Q ss_pred cccCCCCc-cccccceeeeccCCC
Q 010131 81 SFVGEIPP-ALLTGKVIFKYDNNP 103 (517)
Q Consensus 81 ~l~~~~P~-~~~~~~~~~~~~~n~ 103 (517)
++++ +++ .-...+..+.+.+|.
T Consensus 167 ~l~~-~~~l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 167 QISD-IVPLAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CCCC-CGGGTTCTTCCEEECCSSC
T ss_pred cccc-chhhcCCCccCEEECCCCc
Confidence 7774 433 112234445555553
No 371
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.79 E-value=8.7e-09 Score=107.76 Aligned_cols=75 Identities=27% Similarity=0.386 Sum_probs=37.1
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCccccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNS 81 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 81 (517)
+.|+|++|+|++ +|. .+++|+.|+|++|.|++ +|. .+++|+.|+|++|+|++ +|. +. ++|+.|++++|+
T Consensus 123 ~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~ 191 (571)
T 3cvr_A 123 KHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNL 191 (571)
T ss_dssp CEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSC
T ss_pred CEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCC
Confidence 444444444443 443 34455555555555554 222 34455555555555552 444 33 455555555555
Q ss_pred ccCCCCc
Q 010131 82 FVGEIPP 88 (517)
Q Consensus 82 l~~~~P~ 88 (517)
|+ .+|.
T Consensus 192 L~-~lp~ 197 (571)
T 3cvr_A 192 LE-SLPA 197 (571)
T ss_dssp CS-SCCC
T ss_pred CC-chhh
Confidence 55 4555
No 372
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.78 E-value=1e-10 Score=105.56 Aligned_cols=99 Identities=23% Similarity=0.342 Sum_probs=79.2
Q ss_pred CceecCCCCcccccCCc------cccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccc
Q 010131 1 MARCALSGKNLKGEIPP------ELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQE 74 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~------~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~ 74 (517)
++.+++++|.++|.+|. .|..+++|+.|+|++|.+++ +|.+..+++|+.|++++|.++ .+|..+..+++|+.
T Consensus 20 l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~ 97 (198)
T 1ds9_A 20 VVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-ISSLSGMENLRILSLGRNLIK-KIENLDAVADTLEE 97 (198)
T ss_dssp CCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CCCHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSE
T ss_pred ccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-ccccccCCCCCEEECCCCCcc-cccchhhcCCcCCE
Confidence 46788888899888887 88889999999999999998 558888999999999999998 78887777889999
Q ss_pred cccccccccCCCCcccc--ccceeeeccCCC
Q 010131 75 LHIENNSFVGEIPPALL--TGKVIFKYDNNP 103 (517)
Q Consensus 75 l~l~~N~l~~~~P~~~~--~~~~~~~~~~n~ 103 (517)
|++++|++++ +|. +. ..+..+.+.+|.
T Consensus 98 L~L~~N~l~~-l~~-~~~l~~L~~L~l~~N~ 126 (198)
T 1ds9_A 98 LWISYNQIAS-LSG-IEKLVNLRVLYMSNNK 126 (198)
T ss_dssp EEEEEEECCC-HHH-HHHHHHSSEEEESEEE
T ss_pred EECcCCcCCc-CCc-cccCCCCCEEECCCCc
Confidence 9999999984 663 22 234455555554
No 373
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=98.78 E-value=1.1e-08 Score=107.11 Aligned_cols=94 Identities=20% Similarity=0.229 Sum_probs=77.0
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccc-------c
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNL-------Q 73 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L-------~ 73 (517)
|+.|+|++|+|++ +|. .+++|+.|+|++|.|++.++ |. ++|+.|+|++|+|+ .+|. +.. +| +
T Consensus 142 L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~ 210 (571)
T 3cvr_A 142 LEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTFLPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEI 210 (571)
T ss_dssp CCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCCCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCE
T ss_pred ccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCCcch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccce
Confidence 6889999999995 786 67899999999999999444 65 89999999999999 8888 665 77 9
Q ss_pred ccccccccccCCCCccccc--cceeeeccCCCccc
Q 010131 74 ELHIENNSFVGEIPPALLT--GKVIFKYDNNPKLH 106 (517)
Q Consensus 74 ~l~l~~N~l~~~~P~~~~~--~~~~~~~~~n~~~~ 106 (517)
.|++++|+|+ .+|..+.. .+..+.+.+|+..+
T Consensus 211 ~L~Ls~N~l~-~lp~~l~~l~~L~~L~L~~N~l~~ 244 (571)
T 3cvr_A 211 FFRCRENRIT-HIPENILSLDPTCTIILEDNPLSS 244 (571)
T ss_dssp EEECCSSCCC-CCCGGGGGSCTTEEEECCSSSCCH
T ss_pred EEecCCCcce-ecCHHHhcCCCCCEEEeeCCcCCC
Confidence 9999999999 79987754 55667788887553
No 374
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.78 E-value=7.5e-09 Score=109.38 Aligned_cols=78 Identities=29% Similarity=0.483 Sum_probs=43.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|+|++. |+ +..|++|+.|+|++|.|++ +|.+..+++|+.|+|++|+|+ .+| .+..+++|+.|+|++|
T Consensus 67 L~~L~Ls~N~l~~~-~~-l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~-~l~-~l~~l~~L~~L~Ls~N 141 (605)
T 1m9s_A 67 VTKLFLNGNKLTDI-KP-LTNLKNLGWLFLDENKIKD-LSSLKDLKKLKSLSLEHNGIS-DIN-GLVHLPQLESLYLGNN 141 (605)
T ss_dssp CCEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCC-CTTSTTCTTCCEEECTTSCCC-CCG-GGGGCTTCSEEECCSS
T ss_pred CCEEEeeCCCCCCC-hh-hccCCCCCEEECcCCCCCC-ChhhccCCCCCEEEecCCCCC-CCc-cccCCCccCEEECCCC
Confidence 45666666666643 32 5566666666666666654 334555566666666666655 232 3555555555555555
Q ss_pred ccc
Q 010131 81 SFV 83 (517)
Q Consensus 81 ~l~ 83 (517)
+++
T Consensus 142 ~l~ 144 (605)
T 1m9s_A 142 KIT 144 (605)
T ss_dssp CCC
T ss_pred ccC
Confidence 555
No 375
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=98.77 E-value=4.3e-10 Score=101.47 Aligned_cols=99 Identities=25% Similarity=0.275 Sum_probs=81.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIEN 79 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~ 79 (517)
|++|+|++|++++ +| .+.++++|+.|+|++|.++. +|. +..+++|+.|+|++|++++ +| .+..+++|+.|++++
T Consensus 50 L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~ 124 (198)
T 1ds9_A 50 CKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSN 124 (198)
T ss_dssp CSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESE
T ss_pred CCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCC
Confidence 6889999999995 78 89999999999999999995 555 7788999999999999994 66 588999999999999
Q ss_pred ccccCCCCc--cc--cccceeeeccCCCcc
Q 010131 80 NSFVGEIPP--AL--LTGKVIFKYDNNPKL 105 (517)
Q Consensus 80 N~l~~~~P~--~~--~~~~~~~~~~~n~~~ 105 (517)
|+++ .+|. .+ ...+..+.+.+|+..
T Consensus 125 N~i~-~~~~~~~l~~l~~L~~L~l~~N~l~ 153 (198)
T 1ds9_A 125 NKIT-NWGEIDKLAALDKLEDLLLAGNPLY 153 (198)
T ss_dssp EECC-CHHHHHHHTTTTTCSEEEECSCHHH
T ss_pred CcCC-chhHHHHHhcCCCCCEEEecCCccc
Confidence 9999 4554 22 224556667777643
No 376
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=98.76 E-value=6.4e-09 Score=109.87 Aligned_cols=98 Identities=24% Similarity=0.356 Sum_probs=64.2
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|.|++ +| .+..|++|+.|+|++|.|++ ++.+..|++|+.|+|++|+|++ + ..+..+++|+.|+|++|
T Consensus 89 L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N 163 (605)
T 1m9s_A 89 LGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-INGLVHLPQLESLYLGNNKITD-I-TVLSRLTKLDTLSLEDN 163 (605)
T ss_dssp CCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-CGGGGGCTTCSEEECCSSCCCC-C-GGGGSCTTCSEEECCSS
T ss_pred CCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-CccccCCCccCEEECCCCccCC-c-hhhcccCCCCEEECcCC
Confidence 5677788887774 44 57777777777777777776 3557777777777777777773 3 45677777777777777
Q ss_pred cccCCCCccccccceeeeccCCC
Q 010131 81 SFVGEIPPALLTGKVIFKYDNNP 103 (517)
Q Consensus 81 ~l~~~~P~~~~~~~~~~~~~~n~ 103 (517)
+|++..|-.-...+..+.+.+|.
T Consensus 164 ~l~~~~~l~~l~~L~~L~Ls~N~ 186 (605)
T 1m9s_A 164 QISDIVPLAGLTKLQNLYLSKNH 186 (605)
T ss_dssp CCCCCGGGTTCTTCCEEECCSSC
T ss_pred cCCCchhhccCCCCCEEECcCCC
Confidence 77743331112234445555553
No 377
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.74 E-value=8.6e-09 Score=101.73 Aligned_cols=88 Identities=20% Similarity=0.178 Sum_probs=70.2
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc--ccCccccce-eEecCceeeecCCCCCCCccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD--MSRLIDLRI-VHLENNELTGSLPSYMGSLPNLQELHI 77 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~--~~~l~~L~~-l~l~~n~l~~~~p~~~~~l~~L~~l~l 77 (517)
|++|+|++|+|+...+..|.++++|+.|+|++|++.+.+|. |.++++|.. +.++.|++++..|..|..+++|+.|++
T Consensus 32 l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l 111 (350)
T 4ay9_X 32 AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLI 111 (350)
T ss_dssp CSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEE
T ss_pred CCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccc
Confidence 57899999999843335688899999999999998876663 888888765 666778888666777889999999999
Q ss_pred ccccccCCCCcc
Q 010131 78 ENNSFVGEIPPA 89 (517)
Q Consensus 78 ~~N~l~~~~P~~ 89 (517)
++|+++ .+|+.
T Consensus 112 ~~n~l~-~~~~~ 122 (350)
T 4ay9_X 112 SNTGIK-HLPDV 122 (350)
T ss_dssp EEECCS-SCCCC
T ss_pred cccccc-cCCch
Confidence 999998 56654
No 378
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.72 E-value=8.5e-09 Score=105.96 Aligned_cols=78 Identities=32% Similarity=0.442 Sum_probs=45.3
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++ +|. +..+++|+.|+|++|++++.+| +..+++|+.|+|++|++++..| +..+++|+.|++++|
T Consensus 267 L~~L~l~~n~l~~-~~~-~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 267 LTELKLGANQISN-ISP-LAGLTALTNLELNENQLEDISP-ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNN 341 (466)
T ss_dssp CSEEECCSSCCCC-CGG-GTTCTTCSEEECCSSCCSCCGG-GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSS
T ss_pred CCEEECCCCccCc-ccc-ccCCCccCeEEcCCCcccCchh-hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCC
Confidence 4566666666664 332 5566666666666666665433 5556666666666666664433 445555555555555
Q ss_pred ccc
Q 010131 81 SFV 83 (517)
Q Consensus 81 ~l~ 83 (517)
+++
T Consensus 342 ~l~ 344 (466)
T 1o6v_A 342 KVS 344 (466)
T ss_dssp CCC
T ss_pred ccC
Confidence 555
No 379
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.70 E-value=2.9e-08 Score=101.56 Aligned_cols=95 Identities=17% Similarity=0.234 Sum_probs=70.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++ +| .++.+++|+.|+|++|+|++. | ++.+++|+.|++++|.+++ +| ++.+++|++|++++|
T Consensus 44 L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~-~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~~N 116 (457)
T 3bz5_A 44 LTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D-LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCDTN 116 (457)
T ss_dssp CCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C-CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECCSS
T ss_pred CCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c-cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECCCC
Confidence 5788888888885 46 688888888888888888885 3 7788888888888888884 44 778888888888888
Q ss_pred cccCCCCccccccceeeeccCCC
Q 010131 81 SFVGEIPPALLTGKVIFKYDNNP 103 (517)
Q Consensus 81 ~l~~~~P~~~~~~~~~~~~~~n~ 103 (517)
++++ +|-.-...+..+.+.+|.
T Consensus 117 ~l~~-l~~~~l~~L~~L~l~~N~ 138 (457)
T 3bz5_A 117 KLTK-LDVSQNPLLTYLNCARNT 138 (457)
T ss_dssp CCSC-CCCTTCTTCCEEECTTSC
T ss_pred cCCe-ecCCCCCcCCEEECCCCc
Confidence 8884 653223344455555553
No 380
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=98.69 E-value=1.6e-08 Score=103.89 Aligned_cols=96 Identities=26% Similarity=0.325 Sum_probs=46.7
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCccccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNS 81 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~ 81 (517)
+.|+|++|.+++..| +..+++|+.|+|++|.+++.++ +..+++|+.|++++|++++. +. +..+++|+.|++++|+
T Consensus 246 ~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~L~~n~l~~~-~~-~~~l~~L~~L~L~~n~ 320 (466)
T 1o6v_A 246 TDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP-LAGLTALTNLELNENQLEDI-SP-ISNLKNLTYLTLYFNN 320 (466)
T ss_dssp SEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG-GTTCTTCSEEECCSSCCSCC-GG-GGGCTTCSEEECCSSC
T ss_pred CEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc-ccCCCccCeEEcCCCcccCc-hh-hcCCCCCCEEECcCCc
Confidence 445555555553222 4455555555555555554433 55555555555555555532 22 4555555556666665
Q ss_pred ccCCCCccccccceeeeccCC
Q 010131 82 FVGEIPPALLTGKVIFKYDNN 102 (517)
Q Consensus 82 l~~~~P~~~~~~~~~~~~~~n 102 (517)
+++..|-.....+..+.+.+|
T Consensus 321 l~~~~~~~~l~~L~~L~l~~n 341 (466)
T 1o6v_A 321 ISDISPVSSLTKLQRLFFYNN 341 (466)
T ss_dssp CSCCGGGGGCTTCCEEECCSS
T ss_pred CCCchhhccCccCCEeECCCC
Confidence 554333222223334444444
No 381
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.67 E-value=7.4e-08 Score=93.71 Aligned_cols=133 Identities=17% Similarity=0.204 Sum_probs=97.6
Q ss_pred hcccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCC----CCccccceeeecCCeeEEEEEecCC
Q 010131 200 CKKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH----RNLVPLIGYCEEEHQRILVYEYMHN 275 (517)
Q Consensus 200 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h----~niv~~~~~~~~~~~~~lv~e~~~~ 275 (517)
.+.++.|....||+. |+.+++|+... ......+.+|..+++.+.+ ..+.+++++ +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~--~~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKR--DSVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCc--HHHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 457899999999998 66788897643 2224568899999988865 123444444 467899999999
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCC----------------------------------------
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCN---------------------------------------- 315 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~---------------------------------------- 315 (517)
.++.+... ..++..+...++.+++..|+.||+...
T Consensus 112 ~~l~~~~~-----~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 112 ERITYEQY-----HKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp BCCCHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred cccccccc-----ccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 88864322 235666677788888888888885211
Q ss_pred --------------------CCcEecCCCCCCeEeCCCCcEEEccccCcccc
Q 010131 316 --------------------PGIIHRDVKSSNILLDINMRAKVSDFGLSRQA 347 (517)
Q Consensus 316 --------------------~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~ 347 (517)
..++|+|++|.||+++.+..+.|.||+.+...
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 23599999999999998766799999988653
No 382
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=98.66 E-value=3.5e-08 Score=101.00 Aligned_cols=81 Identities=19% Similarity=0.233 Sum_probs=69.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|+.|+|++|++++ +| ++.+++|+.|++++|.+++. ++..+++|+.|++++|++++ +| ++.+++|+.|++++|
T Consensus 172 L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 172 LTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp CCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS
T ss_pred CCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee--ccccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCC
Confidence 6789999999996 66 88899999999999999986 48889999999999999995 77 888999999999999
Q ss_pred cccCCCCccc
Q 010131 81 SFVGEIPPAL 90 (517)
Q Consensus 81 ~l~~~~P~~~ 90 (517)
++++ +|...
T Consensus 244 ~l~~-~~~~~ 252 (457)
T 3bz5_A 244 PLTE-LDVST 252 (457)
T ss_dssp CCSC-CCCTT
T ss_pred cCCC-cCHHH
Confidence 9995 55433
No 383
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.65 E-value=2.1e-08 Score=102.52 Aligned_cols=61 Identities=31% Similarity=0.444 Sum_probs=45.8
Q ss_pred CCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccccccC--CCCccc
Q 010131 23 EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVG--EIPPAL 90 (517)
Q Consensus 23 ~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~--~~P~~~ 90 (517)
++|+.|+|++|++++ +|.. +++|+.|++++|+++ .+|. .+++|+.|++++|++++ .+|..+
T Consensus 317 ~~L~~L~Ls~N~l~~-lp~~--~~~L~~L~L~~N~l~-~lp~---~l~~L~~L~L~~N~l~~l~~ip~~l 379 (454)
T 1jl5_A 317 PSLEELNVSNNKLIE-LPAL--PPRLERLIASFNHLA-EVPE---LPQNLKQLHVEYNPLREFPDIPESV 379 (454)
T ss_dssp TTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCSSCCCCCTTC
T ss_pred CcCCEEECCCCcccc-cccc--CCcCCEEECCCCccc-cccc---hhhhccEEECCCCCCCcCCCChHHH
Confidence 578888888888887 4432 477888888888888 6776 36788888888888886 666655
No 384
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.62 E-value=2.3e-07 Score=87.74 Aligned_cols=135 Identities=17% Similarity=0.111 Sum_probs=98.6
Q ss_pred ccCCCCce-EEEEEEec-CCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-CCCccccceeeecCCeeEEEEEecCCCCH
Q 010131 202 KIGKGSFG-SVYYGKMK-DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYEYMHNGTL 278 (517)
Q Consensus 202 ~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e~~~~gsL 278 (517)
.+..|..| .||+.... ++..+++|+-.. .....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~---~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~ 107 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKG---SVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTA 107 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEET---HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEH
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCC---CCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCccc
Confidence 45556655 68988765 467899998653 34556888999998884 33477888899888999999999999888
Q ss_pred HhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcC---------------------------------------------
Q 010131 279 RDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG--------------------------------------------- 313 (517)
Q Consensus 279 ~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~--------------------------------------------- 313 (517)
.+..... ......+..+++..|..||+.
T Consensus 108 ~~~~~~~-------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (272)
T 4gkh_A 108 FQVLEEY-------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVW 180 (272)
T ss_dssp HHHHHHC-------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHH
T ss_pred cccccCC-------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHH
Confidence 7654321 123345667777777777751
Q ss_pred ----------CCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 314 ----------CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 314 ----------~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
....++|||+++.||++++++.+-|.||+.+..
T Consensus 181 ~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 181 KEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp HHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 012378999999999999877778999997753
No 385
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=98.62 E-value=1.4e-08 Score=99.99 Aligned_cols=100 Identities=21% Similarity=0.284 Sum_probs=84.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|++|+|++|.+++ + +.+..+++|+.|++++|.+++. |.+..+++|+.|++++|.+++..|..+..+++|+.|++++|
T Consensus 245 L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n 321 (347)
T 4fmz_A 245 LTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISDI-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQN 321 (347)
T ss_dssp CCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCCC-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSS
T ss_pred CCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCCC-hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCC
Confidence 6899999999995 4 4688999999999999999986 66999999999999999999888888999999999999999
Q ss_pred cccCCCCccccccceeeeccCCC
Q 010131 81 SFVGEIPPALLTGKVIFKYDNNP 103 (517)
Q Consensus 81 ~l~~~~P~~~~~~~~~~~~~~n~ 103 (517)
++++..|-........+.+.+|+
T Consensus 322 ~l~~~~~~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 322 HITDIRPLASLSKMDSADFANQV 344 (347)
T ss_dssp SCCCCGGGGGCTTCSEESSSCC-
T ss_pred ccccccChhhhhccceeehhhhc
Confidence 99965452334455667777775
No 386
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=98.61 E-value=7.7e-08 Score=98.33 Aligned_cols=80 Identities=33% Similarity=0.492 Sum_probs=43.7
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
|++|+|++|++++ +| .|+++++|+.|++++|++++ +|.. ..+|+.|++++|++++ +| .++.+++|+.|++++|
T Consensus 133 L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~--~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N 205 (454)
T 1jl5_A 133 LEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDL--PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNN 205 (454)
T ss_dssp CCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCC--CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred CCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCC--cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCC
Confidence 3455555555553 55 35555666666666666555 2321 1355666666666553 44 3566666666666666
Q ss_pred cccCCCCc
Q 010131 81 SFVGEIPP 88 (517)
Q Consensus 81 ~l~~~~P~ 88 (517)
++++ +|.
T Consensus 206 ~l~~-l~~ 212 (454)
T 1jl5_A 206 SLKK-LPD 212 (454)
T ss_dssp CCSS-CCC
T ss_pred cCCc-CCC
Confidence 6663 443
No 387
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.60 E-value=1.9e-08 Score=106.47 Aligned_cols=75 Identities=28% Similarity=0.390 Sum_probs=59.3
Q ss_pred CCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccccccCCCCccccc--cceeeecc
Q 010131 23 EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENNSFVGEIPPALLT--GKVIFKYD 100 (517)
Q Consensus 23 ~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N~l~~~~P~~~~~--~~~~~~~~ 100 (517)
++|+.|+|++|+|++.+ ..+++|+.|+|++|+|+ .+|. .+++|+.|++++|+|+ .+|..+.. .+..+.+.
T Consensus 221 ~~L~~L~Ls~N~L~~lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~ 292 (622)
T 3g06_A 221 SGLKELIVSGNRLTSLP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLE 292 (622)
T ss_dssp TTCCEEECCSSCCSCCC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECC
T ss_pred CCCCEEEccCCccCcCC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEec
Confidence 67888888888888744 45678999999999998 7777 5678999999999999 88877643 45667788
Q ss_pred CCCcc
Q 010131 101 NNPKL 105 (517)
Q Consensus 101 ~n~~~ 105 (517)
+|+..
T Consensus 293 ~N~l~ 297 (622)
T 3g06_A 293 GNPLS 297 (622)
T ss_dssp SCCCC
T ss_pred CCCCC
Confidence 88754
No 388
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.57 E-value=2e-07 Score=88.97 Aligned_cols=139 Identities=19% Similarity=0.237 Sum_probs=91.6
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCC---CccccceeeecCCeeEEEEEecCCCC
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNGT 277 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~gs 277 (517)
+.|+.|.++.||+++..+|+.++||+...........|..|++.|+.+++. .+.+++++. ..++||||+++++
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 578999999999999888999999996543333346789999999999765 466777653 3689999999987
Q ss_pred HHh-----------HhhccCCC------------------CccCHHHHH-----------------------HHHHHHHH
Q 010131 278 LRD-----------RLHGSVNQ------------------KPLDWLTRL-----------------------QIAHDAAK 305 (517)
Q Consensus 278 L~~-----------~l~~~~~~------------------~~l~~~~~~-----------------------~i~~~ia~ 305 (517)
+.. .+|..... ..-+|.... ..+.+++.
T Consensus 97 ~~~~~~~~lg~~LA~LH~~~~~~fG~~~~~~~G~~~q~~~w~~~W~~f~~~~rl~~~l~~a~~~~~~~~~~~~~~~~l~~ 176 (288)
T 3d1u_A 97 PTPEAAERFGHQLAAMHLAGAESFGATWDGYIGPLPMDNTPRSTWPEFYAEQRILPYLRRAADRGALTPGDVRLVEKVLD 176 (288)
T ss_dssp CCHHHHHHHHHHHHHHHHTCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHHTHHHHHHHHHTTSSCHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHcCCCCccCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHH
Confidence 421 12221100 011333221 11122222
Q ss_pred HHHHH-hcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcc
Q 010131 306 GLEYL-HTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 345 (517)
Q Consensus 306 aL~~L-H~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 345 (517)
.+..+ -......++|+|+.+.||+++. +.+.|.|| .+.
T Consensus 177 ~l~~~l~~~~~~~l~HgD~~~~N~l~~~-~~~~~iD~-~~~ 215 (288)
T 3d1u_A 177 ALDHLAGDPEPPARIHGDLWNGNVLWQD-DGAVVIDP-AAH 215 (288)
T ss_dssp THHHHTCSCCCCEEECSCCSGGGEEEET-TEEEECSC-CCE
T ss_pred HHHHHhcCCCCCcceECCCCcCcEEEeC-CCeEEEcC-CcC
Confidence 22211 1223478999999999999987 45889999 554
No 389
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.55 E-value=3.6e-09 Score=105.91 Aligned_cols=104 Identities=19% Similarity=0.301 Sum_probs=73.3
Q ss_pred CceecCCCCccc-ccCC---ccccCCCCCcEEEcCCCCCC--C---CCC-cccCccccceeEecCceee----ecCCCCC
Q 010131 1 MARCALSGKNLK-GEIP---PELKNMEALTELWLDGNFLT--G---PLP-DMSRLIDLRIVHLENNELT----GSLPSYM 66 (517)
Q Consensus 1 l~~L~l~~n~~~-~~~p---~~~~~l~~L~~L~l~~N~l~--~---~~p-~~~~l~~L~~l~l~~n~l~----~~~p~~~ 66 (517)
|+.|+|++|+++ +.+| ..+..+++|+.|+|++|.|+ | ..| .+..+++|+.|+|++|.++ +.+|..+
T Consensus 161 L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l 240 (386)
T 2ca6_A 161 LRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 240 (386)
T ss_dssp CCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHG
T ss_pred CcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHH
Confidence 577888888887 4455 45667788888888888887 3 345 4777888888888888885 5677777
Q ss_pred CCcccccccccccccccCC----CCccc----cccceeeeccCCCc
Q 010131 67 GSLPNLQELHIENNSFVGE----IPPAL----LTGKVIFKYDNNPK 104 (517)
Q Consensus 67 ~~l~~L~~l~l~~N~l~~~----~P~~~----~~~~~~~~~~~n~~ 104 (517)
..+++|+.|++++|.+++. +|..+ ...+..+.+.+|.-
T Consensus 241 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i 286 (386)
T 2ca6_A 241 KSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEI 286 (386)
T ss_dssp GGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCC
T ss_pred ccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcC
Confidence 7888888888888888754 34433 23445566666653
No 390
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.54 E-value=4.2e-07 Score=87.69 Aligned_cols=135 Identities=15% Similarity=0.187 Sum_probs=93.1
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCC---Cccccceeee-cCCeeEEEEEecCCC
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCE-EEHQRILVYEYMHNG 276 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~-~~~~~~lv~e~~~~g 276 (517)
+.++.|....||+. |..+++|+-.. ......+.+|.++|+.+.+. .+.+++.++. ..+..++|||+++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 45788888899988 56788888532 23456788999999999642 3556666664 455678999999998
Q ss_pred CHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 010131 277 TLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTG------------------------------------------- 313 (517)
Q Consensus 277 sL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~------------------------------------------- 313 (517)
++.+... ..++..+...++.++++.|+.||+.
T Consensus 99 ~l~~~~~-----~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 173 (306)
T 3tdw_A 99 ILGEDGM-----AVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLT 173 (306)
T ss_dssp ECHHHHH-----TTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHH
T ss_pred ECchhhh-----hhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHH
Confidence 8765321 1234444455555555555555541
Q ss_pred --------------CCCCcEecCCCCCCeEeCC---CCc-EEEccccCccc
Q 010131 314 --------------CNPGIIHRDVKSSNILLDI---NMR-AKVSDFGLSRQ 346 (517)
Q Consensus 314 --------------~~~~ivH~dlk~~Nill~~---~~~-~kl~Dfg~a~~ 346 (517)
....++|+|+++.||+++. ++. +.|.||+.+..
T Consensus 174 ~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 174 LRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1245699999999999987 455 48999997754
No 391
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.53 E-value=1.4e-07 Score=99.78 Aligned_cols=90 Identities=30% Similarity=0.341 Sum_probs=61.2
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCCCCCCcccccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIENN 80 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~~N 80 (517)
++.|++++|+++ .+|..+. ++|+.|+|++|.|+..++ .+++|+.|+|++|+|+ .+|. .+++|++|++++|
T Consensus 42 l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N 111 (622)
T 3g06_A 42 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTSLPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIFSN 111 (622)
T ss_dssp CCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSCCCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEECSC
T ss_pred CcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCCCCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCC
Confidence 457788888887 7777665 678888888888775444 4677778888888777 5666 5567777777777
Q ss_pred cccCCCCccccccceeeeccCC
Q 010131 81 SFVGEIPPALLTGKVIFKYDNN 102 (517)
Q Consensus 81 ~l~~~~P~~~~~~~~~~~~~~n 102 (517)
+++ .+|. ....+..+.+.+|
T Consensus 112 ~l~-~l~~-~l~~L~~L~L~~N 131 (622)
T 3g06_A 112 PLT-HLPA-LPSGLCKLWIFGN 131 (622)
T ss_dssp CCC-CCCC-CCTTCCEEECCSS
T ss_pred cCC-CCCC-CCCCcCEEECCCC
Confidence 777 4665 3333444445544
No 392
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.52 E-value=1e-08 Score=101.73 Aligned_cols=83 Identities=22% Similarity=0.209 Sum_probs=43.8
Q ss_pred CceecCCCCcccccCC----ccccCCC-CCcEEEcCCCCCCCCCCc-ccCc-----cccceeEecCceeeecCCCCCCC-
Q 010131 1 MARCALSGKNLKGEIP----PELKNME-ALTELWLDGNFLTGPLPD-MSRL-----IDLRIVHLENNELTGSLPSYMGS- 68 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p----~~~~~l~-~L~~L~l~~N~l~~~~p~-~~~l-----~~L~~l~l~~n~l~~~~p~~~~~- 68 (517)
|++|+|++|++++..+ ..|.+++ +|+.|+|++|.|++..+. +..+ ++|+.|+|++|.+++..+..+..
T Consensus 24 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~ 103 (362)
T 3goz_A 24 VTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKT 103 (362)
T ss_dssp CCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHH
T ss_pred ceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHH
Confidence 3455666666554433 4445555 566666666666555443 4443 55666666666655433332222
Q ss_pred ---c-cccccccccccccc
Q 010131 69 ---L-PNLQELHIENNSFV 83 (517)
Q Consensus 69 ---l-~~L~~l~l~~N~l~ 83 (517)
+ ++|+.|++++|+++
T Consensus 104 l~~~~~~L~~L~Ls~N~l~ 122 (362)
T 3goz_A 104 LAAIPFTITVLDLGWNDFS 122 (362)
T ss_dssp HHTSCTTCCEEECCSSCGG
T ss_pred HHhCCCCccEEECcCCcCC
Confidence 2 45666666666655
No 393
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=98.52 E-value=5.1e-09 Score=104.85 Aligned_cols=104 Identities=18% Similarity=0.241 Sum_probs=74.8
Q ss_pred CceecCCCCcccc----cCCccccCC---------CCCcEEEcCCCCCC-CCCC---c-ccCccccceeEecCceee--e
Q 010131 1 MARCALSGKNLKG----EIPPELKNM---------EALTELWLDGNFLT-GPLP---D-MSRLIDLRIVHLENNELT--G 60 (517)
Q Consensus 1 l~~L~l~~n~~~~----~~p~~~~~l---------~~L~~L~l~~N~l~-~~~p---~-~~~l~~L~~l~l~~n~l~--~ 60 (517)
|+.|+|++|.+++ .++..+..+ ++|+.|+|++|.++ +.+| . +..+++|+.|+|++|+++ |
T Consensus 124 L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g 203 (386)
T 2ca6_A 124 LEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEG 203 (386)
T ss_dssp CCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHH
T ss_pred CCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhH
Confidence 6788888888863 355666666 88888888888887 4455 2 667888888888888887 3
Q ss_pred ---cCCCCCCCccccccccccccccc----CCCCccccc--cceeeeccCCCc
Q 010131 61 ---SLPSYMGSLPNLQELHIENNSFV----GEIPPALLT--GKVIFKYDNNPK 104 (517)
Q Consensus 61 ---~~p~~~~~l~~L~~l~l~~N~l~----~~~P~~~~~--~~~~~~~~~n~~ 104 (517)
.+|..+..+++|+.|++++|.++ +.+|..+.. .+..+.+.+|.-
T Consensus 204 ~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i 256 (386)
T 2ca6_A 204 IEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLL 256 (386)
T ss_dssp HHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCC
T ss_pred HHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCC
Confidence 45557788888888888888885 456654432 445566677653
No 394
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.45 E-value=4.8e-08 Score=91.48 Aligned_cols=82 Identities=21% Similarity=0.289 Sum_probs=64.6
Q ss_pred ecCCCCcccccCCc----cccCCCCCcEEEcCCCCCCC--CCCc-ccCccccceeEecCceeeecCCCCCCCcc--cccc
Q 010131 4 CALSGKNLKGEIPP----ELKNMEALTELWLDGNFLTG--PLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLP--NLQE 74 (517)
Q Consensus 4 L~l~~n~~~~~~p~----~~~~l~~L~~L~l~~N~l~~--~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~--~L~~ 74 (517)
++++.|... .++. ...++++|+.|+|++|+|++ .+|+ +..+++|+.|+|++|+|++. ..+..+. +|+.
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~ 224 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEE 224 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSE
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcce
Confidence 677888543 3332 22468999999999999999 4556 78899999999999999954 3355555 8999
Q ss_pred cccccccccCCCCc
Q 010131 75 LHIENNSFVGEIPP 88 (517)
Q Consensus 75 l~l~~N~l~~~~P~ 88 (517)
|+|++|.+++.+|.
T Consensus 225 L~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 225 LWLDGNSLCDTFRD 238 (267)
T ss_dssp EECTTSTTGGGCSS
T ss_pred EEccCCcCccccCc
Confidence 99999999988874
No 395
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.38 E-value=5.2e-08 Score=91.24 Aligned_cols=62 Identities=21% Similarity=0.324 Sum_probs=30.0
Q ss_pred CceecCCCCcccc--cCCccccCCCCCcEEEcCCCCCCCCCCcccCcc--ccceeEecCceeeecCC
Q 010131 1 MARCALSGKNLKG--EIPPELKNMEALTELWLDGNFLTGPLPDMSRLI--DLRIVHLENNELTGSLP 63 (517)
Q Consensus 1 l~~L~l~~n~~~~--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~--~L~~l~l~~n~l~~~~p 63 (517)
|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. .++..+. +|+.|+|++|.+++.+|
T Consensus 172 L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 172 LLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp CCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred CCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-hhhhhcccCCcceEEccCCcCccccC
Confidence 3455555555554 2334444555555555555555543 2122222 55555555555554444
No 396
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.36 E-value=8.7e-07 Score=87.45 Aligned_cols=80 Identities=5% Similarity=0.037 Sum_probs=55.9
Q ss_pred ccc-CCCCceEEEEEEec-------CCcEEEEEEecCCC---chhHHHHHHHHHHHhcCC-C--CCccccceeeecC---
Q 010131 201 KKI-GKGSFGSVYYGKMK-------DGKEVAVKIMADSC---SHRTQQFVTEVALLSRIH-H--RNLVPLIGYCEEE--- 263 (517)
Q Consensus 201 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-h--~niv~~~~~~~~~--- 263 (517)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+.+++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 457 88889999998764 26788999865422 101245678888888884 3 3567788877655
Q ss_pred CeeEEEEEecCCCCHHh
Q 010131 264 HQRILVYEYMHNGTLRD 280 (517)
Q Consensus 264 ~~~~lv~e~~~~gsL~~ 280 (517)
+..++||||++|..+.+
T Consensus 106 g~~~~v~e~l~G~~l~~ 122 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPPD 122 (357)
T ss_dssp SSCEEEEECCCCBCCCB
T ss_pred CCceEEEEecCCCChhh
Confidence 35689999999876643
No 397
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.36 E-value=1.9e-08 Score=98.45 Aligned_cols=104 Identities=12% Similarity=0.080 Sum_probs=84.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCC-CCc-ccCccccceeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGP-LPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~-~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
++.|++++|.+.+..|. ++.+++|+.|+|++|.+++. +|. +..+++|+.|+|++|.+++..|..++.+++|+.|+++
T Consensus 72 l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~ 150 (336)
T 2ast_B 72 VIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLS 150 (336)
T ss_dssp CSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECT
T ss_pred ceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECC
Confidence 57899999999976554 77899999999999999876 776 8899999999999999998888889999999999999
Q ss_pred cc-cccCC-CCccc--cccceeeeccCCCcc
Q 010131 79 NN-SFVGE-IPPAL--LTGKVIFKYDNNPKL 105 (517)
Q Consensus 79 ~N-~l~~~-~P~~~--~~~~~~~~~~~n~~~ 105 (517)
+| .+++. +|..+ ...+..+.+.+|+..
T Consensus 151 ~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l 181 (336)
T 2ast_B 151 GCSGFSEFALQTLLSSCSRLDELNLSWCFDF 181 (336)
T ss_dssp TCBSCCHHHHHHHHHHCTTCCEEECCCCTTC
T ss_pred CCCCCCHHHHHHHHhcCCCCCEEcCCCCCCc
Confidence 99 67752 44433 234566677777433
No 398
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=98.36 E-value=5.4e-08 Score=95.21 Aligned_cols=102 Identities=20% Similarity=0.281 Sum_probs=84.9
Q ss_pred CceecCCCCcccccCCccccCC--CCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeec-CCCCCCCccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNM--EALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGS-LPSYMGSLPNLQELHI 77 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l--~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~-~p~~~~~l~~L~~l~l 77 (517)
++.|++++|++. |..+..+ ++|+.|++++|.+++.++.+..+++|+.|+|++|.+++. +|..+..+++|+.|++
T Consensus 49 ~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L 125 (336)
T 2ast_B 49 WQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSL 125 (336)
T ss_dssp SSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCSCCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEEC
T ss_pred heeeccccccCC---HHHHHhhhhccceEEEcCCccccccchhhccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeC
Confidence 367899999887 5667777 899999999999999999888899999999999999866 8888999999999999
Q ss_pred ccccccCCCCccccc--cceeeeccCCCcc
Q 010131 78 ENNSFVGEIPPALLT--GKVIFKYDNNPKL 105 (517)
Q Consensus 78 ~~N~l~~~~P~~~~~--~~~~~~~~~n~~~ 105 (517)
++|.+++..|..+.. .+..+.+.+|...
T Consensus 126 ~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l 155 (336)
T 2ast_B 126 EGLRLSDPIVNTLAKNSNLVRLNLSGCSGF 155 (336)
T ss_dssp TTCBCCHHHHHHHTTCTTCSEEECTTCBSC
T ss_pred cCcccCHHHHHHHhcCCCCCEEECCCCCCC
Confidence 999998777765533 4556677777433
No 399
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.36 E-value=1.2e-06 Score=86.60 Aligned_cols=73 Identities=8% Similarity=0.135 Sum_probs=55.3
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCC--ccccceeeecC-CeeEEEEEecCCCC
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGYCEEE-HQRILVYEYMHNGT 277 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~~~~~-~~~~lv~e~~~~gs 277 (517)
+.++.|....+|+... +++.+++|+.... ..+..|..+++.+.... +.++++++... +..++||||++|.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 5688899999999986 4888999987532 25888999999886433 55677766654 56899999999865
Q ss_pred HH
Q 010131 278 LR 279 (517)
Q Consensus 278 L~ 279 (517)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 53
No 400
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.30 E-value=5.1e-07 Score=88.92 Aligned_cols=100 Identities=15% Similarity=0.144 Sum_probs=74.4
Q ss_pred ceecCCC-CcccccCCccccCCC-CCcEEEcCCCCCCCCCCcccCccccceeEecC-ceeeecCCC-CCCCccccccccc
Q 010131 2 ARCALSG-KNLKGEIPPELKNME-ALTELWLDGNFLTGPLPDMSRLIDLRIVHLEN-NELTGSLPS-YMGSLPNLQELHI 77 (517)
Q Consensus 2 ~~L~l~~-n~~~~~~p~~~~~l~-~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~-n~l~~~~p~-~~~~l~~L~~l~l 77 (517)
..|++++ |++....+..|..+. .|+.|+|++|+|+..++......+|+.|++++ |.++ .+|. .|..+++|+.|++
T Consensus 131 ~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdL 209 (350)
T 4ay9_X 131 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDI 209 (350)
T ss_dssp EEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEEC
T ss_pred hhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhc
Confidence 3566654 566644445666664 68899999999998777755667899999975 5566 7775 4788999999999
Q ss_pred ccccccCCCCccccccceeeeccCCC
Q 010131 78 ENNSFVGEIPPALLTGKVIFKYDNNP 103 (517)
Q Consensus 78 ~~N~l~~~~P~~~~~~~~~~~~~~n~ 103 (517)
++|+|+ .+|...+.+...+...++.
T Consensus 210 s~N~l~-~lp~~~~~~L~~L~~l~~~ 234 (350)
T 4ay9_X 210 SRTRIH-SLPSYGLENLKKLRARSTY 234 (350)
T ss_dssp TTSCCC-CCCSSSCTTCCEEECTTCT
T ss_pred CCCCcC-ccChhhhccchHhhhccCC
Confidence 999999 7998777666655555543
No 401
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=98.29 E-value=5.7e-08 Score=96.28 Aligned_cols=101 Identities=14% Similarity=0.053 Sum_probs=82.5
Q ss_pred eecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCC----c-ccCcc-ccceeEecCceeeecCCCCCCCc-----cc
Q 010131 3 RCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLP----D-MSRLI-DLRIVHLENNELTGSLPSYMGSL-----PN 71 (517)
Q Consensus 3 ~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p----~-~~~l~-~L~~l~l~~n~l~~~~p~~~~~l-----~~ 71 (517)
.++|++|+++|.+|..+...++|+.|+|++|.|++..+ + |..++ +|+.|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46899999999988877777789999999999999887 5 77888 89999999999997767767765 89
Q ss_pred ccccccccccccCCCCcccc-------ccceeeeccCCC
Q 010131 72 LQELHIENNSFVGEIPPALL-------TGKVIFKYDNNP 103 (517)
Q Consensus 72 L~~l~l~~N~l~~~~P~~~~-------~~~~~~~~~~n~ 103 (517)
|+.|++++|++++..+..+. .....+.+.+|.
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 120 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWND 120 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSC
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCc
Confidence 99999999999965554332 244556666665
No 402
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.18 E-value=8.1e-06 Score=79.80 Aligned_cols=140 Identities=16% Similarity=0.228 Sum_probs=79.9
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCC--CCCccccce------eeecCCeeEEEEEe
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH--HRNLVPLIG------YCEEEHQRILVYEY 272 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--h~niv~~~~------~~~~~~~~~lv~e~ 272 (517)
+.|+.|..+.||+....+| .+++|+.... ...+..|..+++.+. .-.+.+++. +....+..+++|+|
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~ 112 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDW 112 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEEC
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEe
Confidence 3466677899999987655 5899988752 233445556555552 112333332 12345678999999
Q ss_pred cCCCCHH--------------hHhhccCC----C-------CccCHHHH-------------------------------
Q 010131 273 MHNGTLR--------------DRLHGSVN----Q-------KPLDWLTR------------------------------- 296 (517)
Q Consensus 273 ~~~gsL~--------------~~l~~~~~----~-------~~l~~~~~------------------------------- 296 (517)
++|..+. ..+|.... . ....|...
T Consensus 113 i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 192 (346)
T 2q83_A 113 IEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEI 192 (346)
T ss_dssp CCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred ecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHH
Confidence 9986542 11121100 0 01122211
Q ss_pred HHHHHHHHHHHHHHhc----------CCCCCcEecCCCCCCeEeCCCCcEEEccccCcc
Q 010131 297 LQIAHDAAKGLEYLHT----------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 345 (517)
Q Consensus 297 ~~i~~~ia~aL~~LH~----------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 345 (517)
..+..++..++.+|+. .....++|||+++.||+++.++.+.|+||+.+.
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 193 DGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 1111223445666652 023789999999999999888899999999764
No 403
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.15 E-value=6.5e-06 Score=82.42 Aligned_cols=74 Identities=16% Similarity=0.171 Sum_probs=49.0
Q ss_pred cccCCCCceEEEEEEec-CCcEEEEEEecCCCc-------hhHHHHHHHHHHHhcCCC--CCcc-ccceeeecCCeeEEE
Q 010131 201 KKIGKGSFGSVYYGKMK-DGKEVAVKIMADSCS-------HRTQQFVTEVALLSRIHH--RNLV-PLIGYCEEEHQRILV 269 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~h--~niv-~~~~~~~~~~~~~lv 269 (517)
+.+|.|.++.||++... +++.++||....... ...+.+..|.++++.+.. +..+ +++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 57999999999999764 468899998653221 123456779999888732 3333 44443 34456899
Q ss_pred EEecCCC
Q 010131 270 YEYMHNG 276 (517)
Q Consensus 270 ~e~~~~g 276 (517)
||++++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 404
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.14 E-value=2.7e-06 Score=82.88 Aligned_cols=89 Identities=15% Similarity=0.050 Sum_probs=74.8
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccc-eeEecCceeeecCCCCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLR-IVHLENNELTGSLPSYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~-~l~l~~n~l~~~~p~~~~~l~~L~~l~l~ 78 (517)
|+.|+|++|+++..-+..|.++++|+.|+|++| ++...+. |.++.+|+ .+++++ .++..-+..|.++++|+.++++
T Consensus 228 L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~ 305 (329)
T 3sb4_A 228 LVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLAT 305 (329)
T ss_dssp CCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEEC
T ss_pred CeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeC
Confidence 678999999999444457889999999999998 7776666 99999999 999999 6773445679999999999999
Q ss_pred cccccCCCCccccc
Q 010131 79 NNSFVGEIPPALLT 92 (517)
Q Consensus 79 ~N~l~~~~P~~~~~ 92 (517)
+|+++ .+++..+.
T Consensus 306 ~n~i~-~I~~~aF~ 318 (329)
T 3sb4_A 306 GDKIT-TLGDELFG 318 (329)
T ss_dssp SSCCC-EECTTTTC
T ss_pred CCccC-ccchhhhc
Confidence 99999 78876654
No 405
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.07 E-value=1.4e-07 Score=96.44 Aligned_cols=103 Identities=18% Similarity=0.198 Sum_probs=75.5
Q ss_pred CceecCCCCcccccCCccccC-----CCCCcEEEcCCCCCCCC----CCc-ccCccccceeEecCceeeecCCCCCCC--
Q 010131 1 MARCALSGKNLKGEIPPELKN-----MEALTELWLDGNFLTGP----LPD-MSRLIDLRIVHLENNELTGSLPSYMGS-- 68 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~-----l~~L~~L~l~~N~l~~~----~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~-- 68 (517)
|+.|+|++|.+++..+..+.. .++|+.|+|++|.+++. ++. +..+++|+.|+|++|.+++..+..+..
T Consensus 286 L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l 365 (461)
T 1z7x_W 286 LKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGL 365 (461)
T ss_dssp CCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHH
T ss_pred cceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHH
Confidence 678999999988654444433 36899999999999876 344 677899999999999988654444432
Q ss_pred ---cccccccccccccccC----CCCcccc--ccceeeeccCCC
Q 010131 69 ---LPNLQELHIENNSFVG----EIPPALL--TGKVIFKYDNNP 103 (517)
Q Consensus 69 ---l~~L~~l~l~~N~l~~----~~P~~~~--~~~~~~~~~~n~ 103 (517)
.++|+.|++++|++++ .+|..+. ..+..+.+.+|+
T Consensus 366 ~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 366 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp TSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred cCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 6789999999999885 5665543 345566777775
No 406
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.04 E-value=7.9e-08 Score=98.42 Aligned_cols=84 Identities=23% Similarity=0.238 Sum_probs=49.4
Q ss_pred CceecCCCCcccccC-----CccccCCCCCcEEEcCCCCCCCC----CCc-ccCccccceeEecCceeeecCCCCCCC--
Q 010131 1 MARCALSGKNLKGEI-----PPELKNMEALTELWLDGNFLTGP----LPD-MSRLIDLRIVHLENNELTGSLPSYMGS-- 68 (517)
Q Consensus 1 l~~L~l~~n~~~~~~-----p~~~~~l~~L~~L~l~~N~l~~~----~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~-- 68 (517)
|+.|+|++|.+++.. +..+..+++|+.|+|++|.+++. ++. +..+++|+.|+|++|.+++..+..+..
T Consensus 229 L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l 308 (461)
T 1z7x_W 229 LRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETL 308 (461)
T ss_dssp CCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHH
T ss_pred ccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHh
Confidence 566777777766432 11222467777777777777763 343 556677777777777765432222222
Q ss_pred ---cccccccccccccccC
Q 010131 69 ---LPNLQELHIENNSFVG 84 (517)
Q Consensus 69 ---l~~L~~l~l~~N~l~~ 84 (517)
.++|+.|++++|.+++
T Consensus 309 ~~~~~~L~~L~L~~n~l~~ 327 (461)
T 1z7x_W 309 LEPGCQLESLWVKSCSFTA 327 (461)
T ss_dssp TSTTCCCCEEECTTSCCBG
T ss_pred ccCCccceeeEcCCCCCch
Confidence 2466666666666664
No 407
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.99 E-value=3.7e-05 Score=73.87 Aligned_cols=137 Identities=18% Similarity=0.215 Sum_probs=92.1
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCC---CCCccccceeeecCCeeEEEEEecCCCC
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGYCEEEHQRILVYEYMHNGT 277 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~~~~~~~~~lv~e~~~~gs 277 (517)
+.|+.|....+|+.... +..+++|+.... ....+..|...|+.|. ...+.+++.++...+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~~-~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLINDE-VQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEESS-SCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEEC-CCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 46899999999999874 678899987532 3567889999998883 3568888888887888999999999876
Q ss_pred HHh-----------HhhccCC-------------------CCccCHHHHH---HHH----------------HHHHHHH-
Q 010131 278 LRD-----------RLHGSVN-------------------QKPLDWLTRL---QIA----------------HDAAKGL- 307 (517)
Q Consensus 278 L~~-----------~l~~~~~-------------------~~~l~~~~~~---~i~----------------~~ia~aL- 307 (517)
+.. .++.... .-.-+|.... ++. ..++..+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 421 2222111 0012454332 111 1122222
Q ss_pred HHHhc-CCCCCcEecCCCCCCeEeCCCCcEEEcccc
Q 010131 308 EYLHT-GCNPGIIHRDVKSSNILLDINMRAKVSDFG 342 (517)
Q Consensus 308 ~~LH~-~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg 342 (517)
..|.. .....++|+|+.+.|++++.++ +.|.|+.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23421 1247899999999999999887 8899974
No 408
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.95 E-value=3e-05 Score=73.82 Aligned_cols=74 Identities=19% Similarity=0.265 Sum_probs=54.6
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCC---CccccceeeecCCeeEEEEEecCCCC
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHR---NLVPLIGYCEEEHQRILVYEYMHNGT 277 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~---niv~~~~~~~~~~~~~lv~e~~~~gs 277 (517)
+.+|.|..+.||+.+..||+.|++|+...........|..|+..|+.|.-. -+.+++++. ..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEeecccC
Confidence 568999999999999999999999987654444445688899999888421 234444432 3478999998765
Q ss_pred H
Q 010131 278 L 278 (517)
Q Consensus 278 L 278 (517)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 3
No 409
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.94 E-value=4.6e-07 Score=89.89 Aligned_cols=104 Identities=21% Similarity=0.173 Sum_probs=72.4
Q ss_pred CceecCCCCcccccCCccc-----cCCCCCcEEEcCCCCCCCC----CCc-ccCccccceeEecCceeee----cCCCCC
Q 010131 1 MARCALSGKNLKGEIPPEL-----KNMEALTELWLDGNFLTGP----LPD-MSRLIDLRIVHLENNELTG----SLPSYM 66 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~-----~~l~~L~~L~l~~N~l~~~----~p~-~~~l~~L~~l~l~~n~l~~----~~p~~~ 66 (517)
|+.|+|++|+|+..-...+ ...++|+.|+|++|.|+.. ++. +..+++|+.|+|++|.|+. .++..+
T Consensus 128 L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L 207 (372)
T 3un9_A 128 ARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQL 207 (372)
T ss_dssp EEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHG
T ss_pred ccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHH
Confidence 4689999999875544444 2467899999999998763 233 5678889999999999874 235556
Q ss_pred CCcccccccccccccccCCCCccc------cccceeeeccCCCc
Q 010131 67 GSLPNLQELHIENNSFVGEIPPAL------LTGKVIFKYDNNPK 104 (517)
Q Consensus 67 ~~l~~L~~l~l~~N~l~~~~P~~~------~~~~~~~~~~~n~~ 104 (517)
...++|+.|++++|.|+..-...+ ...+..+.+++|+-
T Consensus 208 ~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i 251 (372)
T 3un9_A 208 DRNRQLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNEL 251 (372)
T ss_dssp GGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSC
T ss_pred hcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCC
Confidence 777889999999999873211111 12455667777763
No 410
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.73 E-value=0.00013 Score=73.46 Aligned_cols=78 Identities=12% Similarity=0.098 Sum_probs=47.5
Q ss_pred CCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCC---CCCccceehhHHHHHHHHH
Q 010131 316 PGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQ---QLTEKSDVYSFGVVLLELI 392 (517)
Q Consensus 316 ~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~slG~~l~ell 392 (517)
..++|||+++.||+++.++ +++.||+.+..-.....-......-...|.+|+..... ......++.+....+|+.+
T Consensus 232 ~~liHGDl~~~Nil~~~~~-~~lID~e~a~~G~p~~Dla~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 310 (420)
T 2pyw_A 232 QALIHGDLHTGSVMVTQDS-TQVIDPEFSFYGPMGFDIGAYLGNLILAFFAQDGHATQENDRKEYKQWILRTIEQTWNLF 310 (420)
T ss_dssp CEEECSCCSGGGEEECSSC-EEECCCTTCEEECHHHHHHHHHHHHHHHHHHGGGGCCSSCCSHHHHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCcEEEeCCC-CEEEeCcccccCchHHHHHHHHHHHHHHHHhcccccccccchHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999876 99999998875432211100000001235555544311 1122455567777888777
Q ss_pred hC
Q 010131 393 SG 394 (517)
Q Consensus 393 tg 394 (517)
++
T Consensus 311 ~~ 312 (420)
T 2pyw_A 311 NK 312 (420)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 411
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=97.73 E-value=1.6e-06 Score=85.88 Aligned_cols=103 Identities=17% Similarity=0.067 Sum_probs=71.8
Q ss_pred CceecCCCCcccccCCcccc-CCCCCcEEEcCCCCCCCCCCc-c-----cCccccceeEecCceeee----cCCCCCCCc
Q 010131 1 MARCALSGKNLKGEIPPELK-NMEALTELWLDGNFLTGPLPD-M-----SRLIDLRIVHLENNELTG----SLPSYMGSL 69 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~-~l~~L~~L~l~~N~l~~~~p~-~-----~~l~~L~~l~l~~n~l~~----~~p~~~~~l 69 (517)
|++|+|++|.++..-...+. .+++|+.|+|++|.|+..... + ...++|+.|+|++|.|+. .++..+..+
T Consensus 103 L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~ 182 (372)
T 3un9_A 103 LDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLAGN 182 (372)
T ss_dssp EEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHHTC
T ss_pred ceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHhcC
Confidence 57899999998754444444 467899999999999875443 3 346789999999999873 244555678
Q ss_pred ccccccccccccccCCC----Ccccc--ccceeeeccCCC
Q 010131 70 PNLQELHIENNSFVGEI----PPALL--TGKVIFKYDNNP 103 (517)
Q Consensus 70 ~~L~~l~l~~N~l~~~~----P~~~~--~~~~~~~~~~n~ 103 (517)
++|++|+|++|.|+..- +..+. ..+..+.+.+|.
T Consensus 183 ~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~ 222 (372)
T 3un9_A 183 TSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNG 222 (372)
T ss_dssp SSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSC
T ss_pred CCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCC
Confidence 89999999999987321 22221 234555666664
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.64 E-value=4.1e-06 Score=74.20 Aligned_cols=84 Identities=21% Similarity=0.281 Sum_probs=59.5
Q ss_pred CceecCCCC-ccccc----CCccccCCCCCcEEEcCCCCCCCC----CCc-ccCccccceeEecCceeeec----CCCCC
Q 010131 1 MARCALSGK-NLKGE----IPPELKNMEALTELWLDGNFLTGP----LPD-MSRLIDLRIVHLENNELTGS----LPSYM 66 (517)
Q Consensus 1 l~~L~l~~n-~~~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~-~~~l~~L~~l~l~~n~l~~~----~p~~~ 66 (517)
|++|+|++| .|... +...+...++|+.|+|++|.|+.. +.. +...+.|+.|+|++|.|+.. +...+
T Consensus 38 L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L 117 (185)
T 1io0_A 38 LEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEAL 117 (185)
T ss_dssp CCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGG
T ss_pred CCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHH
Confidence 577888888 77643 344556678888888888888753 222 45567788888888888732 45566
Q ss_pred CCccccccccc--ccccccC
Q 010131 67 GSLPNLQELHI--ENNSFVG 84 (517)
Q Consensus 67 ~~l~~L~~l~l--~~N~l~~ 84 (517)
...++|+.|++ ++|.+..
T Consensus 118 ~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 118 QSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp GGCSSCCEEECCCCSSCCCH
T ss_pred HhCCCceEEEecCCCCCCCH
Confidence 77778888888 7788773
No 413
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=97.51 E-value=5.7e-06 Score=87.40 Aligned_cols=84 Identities=17% Similarity=0.133 Sum_probs=44.8
Q ss_pred CceecCC----CCccccc-----CCccccCCCCCcEEEcCCC--CCCCCCCc-cc-CccccceeEecCceeee-cCCCCC
Q 010131 1 MARCALS----GKNLKGE-----IPPELKNMEALTELWLDGN--FLTGPLPD-MS-RLIDLRIVHLENNELTG-SLPSYM 66 (517)
Q Consensus 1 l~~L~l~----~n~~~~~-----~p~~~~~l~~L~~L~l~~N--~l~~~~p~-~~-~l~~L~~l~l~~n~l~~-~~p~~~ 66 (517)
|+.|+|+ .|.+++. ++..+.++++|+.|+|+.| .+++..+. +. .+++|+.|+|++|.+++ .++..+
T Consensus 405 L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~ 484 (592)
T 3ogk_B 405 LCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFS 484 (592)
T ss_dssp CCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHH
T ss_pred CcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHH
Confidence 4566664 5566642 2222445666666666532 24443332 22 35666666666666654 233344
Q ss_pred CCcccccccccccccccC
Q 010131 67 GSLPNLQELHIENNSFVG 84 (517)
Q Consensus 67 ~~l~~L~~l~l~~N~l~~ 84 (517)
..+++|+.|++++|.+++
T Consensus 485 ~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 485 RGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp TCCTTCCEEEEESCCCBH
T ss_pred hcCcccCeeeccCCCCcH
Confidence 555666666666666553
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=97.50 E-value=4.2e-06 Score=74.16 Aligned_cols=83 Identities=14% Similarity=0.254 Sum_probs=65.7
Q ss_pred CceecCCCCccccc----CCccccCCCCCcEEEcCCCCCCCC----CCc-ccCccccceeEe--cCceeeec----CCCC
Q 010131 1 MARCALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGP----LPD-MSRLIDLRIVHL--ENNELTGS----LPSY 65 (517)
Q Consensus 1 l~~L~l~~n~~~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~-~~~l~~L~~l~l--~~n~l~~~----~p~~ 65 (517)
|++|+|++|+|... +...+...++|+.|+|++|.|+.. +.. +...+.|+.|+| ++|.++.. +...
T Consensus 67 L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~ 146 (185)
T 1io0_A 67 VKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANM 146 (185)
T ss_dssp CCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHH
T ss_pred cCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHH
Confidence 68999999999753 344456668999999999999874 233 677889999999 88999843 3444
Q ss_pred CCCccccccccccccccc
Q 010131 66 MGSLPNLQELHIENNSFV 83 (517)
Q Consensus 66 ~~~l~~L~~l~l~~N~l~ 83 (517)
+...++|+.|++++|.+.
T Consensus 147 L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 147 LEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HHHCSSCCEEECCCSSHH
T ss_pred HHhCCCcCEEeccCCCCC
Confidence 556689999999999886
No 415
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.47 E-value=0.00062 Score=66.05 Aligned_cols=142 Identities=12% Similarity=0.060 Sum_probs=73.6
Q ss_pred cccCCCCceE-EEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-C-CCccccceeeecCCeeEEEEEecCCCC
Q 010131 201 KKIGKGSFGS-VYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-H-RNLVPLIGYCEEEHQRILVYEYMHNGT 277 (517)
Q Consensus 201 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h-~niv~~~~~~~~~~~~~lv~e~~~~gs 277 (517)
+.|+.|+... +|+....+|..+++|....... ..+..|+.+++.+. + -.+.+++.+..+.+ +++||++.+..
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~g--~ll~e~l~~~~ 98 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHARG--LLLIEDLGDAL 98 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTTT--EEEECCCCSCB
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCCC--EEEEeeCCCcc
Confidence 3465565554 6677664477788886543221 23445667666663 2 23555666543333 78999997766
Q ss_pred HHhHhhcc---------------------CC--CCccCHHHHH-------H-------------HHHHHHHHHHHHh---
Q 010131 278 LRDRLHGS---------------------VN--QKPLDWLTRL-------Q-------------IAHDAAKGLEYLH--- 311 (517)
Q Consensus 278 L~~~l~~~---------------------~~--~~~l~~~~~~-------~-------------i~~~ia~aL~~LH--- 311 (517)
+.+++... .. ...++..... . ....+...+..+.
T Consensus 99 l~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~ 178 (333)
T 3csv_A 99 FTEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQ 178 (333)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhc
Confidence 65443211 00 0111111100 0 0011111222221
Q ss_pred cCCCCCcEecCCCCCCeEeCCC----CcEEEccccCcccc
Q 010131 312 TGCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQA 347 (517)
Q Consensus 312 ~~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~a~~~ 347 (517)
......++|||+.+.||+++.+ +.+.|.||+.+..-
T Consensus 179 ~~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 179 LEGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CCSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred ccCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 1123689999999999999875 67999999987653
No 416
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.45 E-value=0.0014 Score=63.39 Aligned_cols=141 Identities=13% Similarity=0.169 Sum_probs=81.8
Q ss_pred ccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCC--CCcccccee-----eecCCeeEEEEEecC
Q 010131 202 KIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHH--RNLVPLIGY-----CEEEHQRILVYEYMH 274 (517)
Q Consensus 202 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h--~niv~~~~~-----~~~~~~~~lv~e~~~ 274 (517)
.++ |....||+....+|+.+++|+..... .....+..|..+++.+.. -.+++++.. ....+..+++|++++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 466 77889999887778789999986431 234566778888877732 123444443 122456688999998
Q ss_pred CCCHH-----h---------HhhccC------CCCccCHHHH----------------------HHHHHHHHHHHHHHhc
Q 010131 275 NGTLR-----D---------RLHGSV------NQKPLDWLTR----------------------LQIAHDAAKGLEYLHT 312 (517)
Q Consensus 275 ~gsL~-----~---------~l~~~~------~~~~l~~~~~----------------------~~i~~~ia~aL~~LH~ 312 (517)
|..+. . .++... .....++... ...+..++..+.-+-.
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 75431 0 011100 0111222111 1112222222222211
Q ss_pred -CCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 313 -GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 313 -~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
.....++|||+++.||+++ + .+.+.||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 1236789999999999999 4 899999987654
No 417
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.39 E-value=0.0003 Score=67.27 Aligned_cols=70 Identities=10% Similarity=0.107 Sum_probs=43.2
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCc-cccceeeecCCeeEEEEEec-CCCCH
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYM-HNGTL 278 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~-~~gsL 278 (517)
+.|+.|....+|+. ..+++|+........ ....+|+.+++.+....+ .++++++ .+..++++||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~~-~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEEY-INRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC----C-CCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccce-eCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccC
Confidence 67888999999999 458889876432111 122457877777742222 4555543 33357899999 55444
No 418
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.37 E-value=0.00023 Score=58.77 Aligned_cols=54 Identities=26% Similarity=0.345 Sum_probs=25.9
Q ss_pred EEEcCCCCCC--CCCCcccCccccceeEecCceeeecCCC-CCCCccccccccccccccc
Q 010131 27 ELWLDGNFLT--GPLPDMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHIENNSFV 83 (517)
Q Consensus 27 ~L~l~~N~l~--~~~p~~~~l~~L~~l~l~~n~l~~~~p~-~~~~l~~L~~l~l~~N~l~ 83 (517)
.++.+++.|+ ..+..+. ++|+.|+|++|+|+ .+|. .|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCee
Confidence 4555555554 2222222 23555555555555 3333 2444555555555555554
No 419
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.36 E-value=0.00045 Score=69.63 Aligned_cols=72 Identities=17% Similarity=0.316 Sum_probs=49.6
Q ss_pred cccCCCCceEEEEEEecC--------CcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCc-cccceeeecCCeeEEEEE
Q 010131 201 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e 271 (517)
+.|+.|....||+....+ ++.+++|+..... ..+.+..|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~--~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPE--TESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCC--CHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCC--cHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 567888889999998753 5789999885421 12455679999988843333 566665542 38999
Q ss_pred ecCCCCH
Q 010131 272 YMHNGTL 278 (517)
Q Consensus 272 ~~~~gsL 278 (517)
|++|.++
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986443
No 420
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.36 E-value=0.0015 Score=62.85 Aligned_cols=143 Identities=14% Similarity=0.206 Sum_probs=79.6
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCC--cccccee------eecCCeeEEEEEe
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN--LVPLIGY------CEEEHQRILVYEY 272 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n--iv~~~~~------~~~~~~~~lv~e~ 272 (517)
+.|+.|....+|+....+| .+++|+..... ..+.+..|+.+++.+.... +.+++.. ....+..+++++|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 4577788899999987755 68899886521 1234556777777663211 3333321 1224567899999
Q ss_pred cCCCCHHh--------------HhhccC---CCC------ccCHHHHHH------------HHHHHHHHHHHHhc----C
Q 010131 273 MHNGTLRD--------------RLHGSV---NQK------PLDWLTRLQ------------IAHDAAKGLEYLHT----G 313 (517)
Q Consensus 273 ~~~gsL~~--------------~l~~~~---~~~------~l~~~~~~~------------i~~~ia~aL~~LH~----~ 313 (517)
++|..+.. .++... ... ...|...+. +...+...+++++. .
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865321 112110 000 011222110 01123444555542 1
Q ss_pred CCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 314 CNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 314 ~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
...+++|+|+++.||+++.+..+.+.||+.+..
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 236799999999999999876668999987653
No 421
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=97.24 E-value=0.0026 Score=61.86 Aligned_cols=68 Identities=13% Similarity=0.244 Sum_probs=44.1
Q ss_pred CCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCC---CCCcccccee------eecCCeeEEEEEecC
Q 010131 204 GKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIH---HRNLVPLIGY------CEEEHQRILVYEYMH 274 (517)
Q Consensus 204 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---h~niv~~~~~------~~~~~~~~lv~e~~~ 274 (517)
|.|....||+....+| .+++|+...... ..|+.+++.|. -|.+.+++.. ....+..+++|+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4444679999988777 899998765432 34555555552 2324444432 234567899999999
Q ss_pred CCCH
Q 010131 275 NGTL 278 (517)
Q Consensus 275 ~gsL 278 (517)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8755
No 422
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.23 E-value=0.00082 Score=66.26 Aligned_cols=141 Identities=17% Similarity=0.189 Sum_probs=83.7
Q ss_pred cccCCCCceEEEEEEec--------CCcEEEEEEecCCCchhHHHHHHHHHHHhcCC-CCCccccceeeecCCeeEEEEE
Q 010131 201 KKIGKGSFGSVYYGKMK--------DGKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 271 (517)
+.|..|....+|+.... +++.+++|+.... ......+.+|..+++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 45777888899999875 2578999986432 223456678999998884 3333566666643 29999
Q ss_pred ecCCCCHHhH-----------------hhccC--CCCcc--CHHHHHHHHHHHHH-------------------HHHHHh
Q 010131 272 YMHNGTLRDR-----------------LHGSV--NQKPL--DWLTRLQIAHDAAK-------------------GLEYLH 311 (517)
Q Consensus 272 ~~~~gsL~~~-----------------l~~~~--~~~~l--~~~~~~~i~~~ia~-------------------aL~~LH 311 (517)
|++|..|..- +|... -.... -+.++.++..++.. .+..|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 9998654310 11110 01112 24455555544322 223332
Q ss_pred ----c-CCCCCcEecCCCCCCeEeCCC----CcEEEccccCccc
Q 010131 312 ----T-GCNPGIIHRDVKSSNILLDIN----MRAKVSDFGLSRQ 346 (517)
Q Consensus 312 ----~-~~~~~ivH~dlk~~Nill~~~----~~~kl~Dfg~a~~ 346 (517)
. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 1 123578999999999999876 7899999997753
No 423
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=97.17 E-value=0.00043 Score=67.13 Aligned_cols=75 Identities=17% Similarity=0.044 Sum_probs=63.3
Q ss_pred CceecCCCCcccccCCccccCCCCCc-EEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCCCCCCCccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALT-ELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPNLQELHI 77 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~-~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~L~~l~l 77 (517)
|+.|+|++| ++..-+..|.++++|+ .|+|++ .++...+. |.+|++|+.|++++|+++..-+..|.++++|+.++.
T Consensus 252 L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly~ 328 (329)
T 3sb4_A 252 LLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIYK 328 (329)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEEC
T ss_pred CCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhcc
Confidence 688999998 7744456788999999 999998 88877776 999999999999999999444457899999998763
No 424
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.16 E-value=0.0031 Score=56.08 Aligned_cols=103 Identities=12% Similarity=0.054 Sum_probs=68.1
Q ss_pred CCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCccccCCCCcccc
Q 010131 276 GTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQAEEDLTHIS 355 (517)
Q Consensus 276 gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~ 355 (517)
-+|.++|... +.++++.++|.++.|.+.+|.-+-.. ..-..+=+.|..|++..+|.+.+.+ ..+.
T Consensus 33 vSL~eIL~~~--~~PlsEEqaWALc~Qc~~~L~~~~~~--~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~---------- 97 (229)
T 2yle_A 33 LSLEEILRLY--NQPINEEQAWAVCYQCCGSLRAAARR--RQPRHRVRSAAQIRVWRDGAVTLAP-AADD---------- 97 (229)
T ss_dssp EEHHHHHHHH--TSCCCHHHHHHHHHHHHHHHHHHHHT--TCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHc--CCCcCHHHHHHHHHHHHHHHHhhhhc--ccCCceecCCcceEEecCCceeccc-cccc----------
Confidence 3788888764 68899999999999999998876210 1111233456889999999988764 1110
Q ss_pred cccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCC
Q 010131 356 SVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKP 397 (517)
Q Consensus 356 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p 397 (517)
.....+.|||... ...+.+.=|||+|+++|..+--..|
T Consensus 98 ---~~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDygL~ 135 (229)
T 2yle_A 98 ---AGEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDYGLK 135 (229)
T ss_dssp ------------CCSS-SSSCHHHHHHHHHHHHHHHHTTTCC
T ss_pred ---ccccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhcCCC
Confidence 0133577888764 3557888999999999999875444
No 425
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=97.12 E-value=0.0021 Score=65.06 Aligned_cols=73 Identities=11% Similarity=0.087 Sum_probs=47.5
Q ss_pred cccCCCCceEEEEEEecC-CcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCc-cccceeeecCCeeEEEEEecCCCCH
Q 010131 201 KKIGKGSFGSVYYGKMKD-GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNL-VPLIGYCEEEHQRILVYEYMHNGTL 278 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ni-v~~~~~~~~~~~~~lv~e~~~~gsL 278 (517)
+.|+.|....+|+....+ +..+++|+......... ....|..+++.|...++ .++++++. + .+|+||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 568888899999998875 47899998754322111 12478889988864444 46666663 2 359999987544
No 426
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.09 E-value=2.7e-05 Score=82.10 Aligned_cols=102 Identities=16% Similarity=0.132 Sum_probs=69.7
Q ss_pred CceecCC--C----CcccccCC------ccccCCCCCcEEEcCCCCCCCCCCc-ccC-ccccceeEecCceeeecCCCCC
Q 010131 1 MARCALS--G----KNLKGEIP------PELKNMEALTELWLDGNFLTGPLPD-MSR-LIDLRIVHLENNELTGSLPSYM 66 (517)
Q Consensus 1 l~~L~l~--~----n~~~~~~p------~~~~~l~~L~~L~l~~N~l~~~~p~-~~~-l~~L~~l~l~~n~l~~~~p~~~ 66 (517)
|+.|+|+ + |+++ ..| .-+.++++|+.|+|++ .+++..+. +.. +++|+.|+|++|.+++..+..+
T Consensus 399 L~~L~L~~~~~~~~~~l~-~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l 476 (594)
T 2p1m_B 399 MTRFRLCIIEPKAPDYLT-LEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHV 476 (594)
T ss_dssp CCEEEEEESSTTCCCTTT-CCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHH
T ss_pred cceeEeecccCCCccccc-CCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHH
Confidence 5778888 4 5666 223 2256789999999977 66665443 554 8899999999999876544444
Q ss_pred -CCcccccccccccccccCCCCcccc---ccceeeeccCCCc
Q 010131 67 -GSLPNLQELHIENNSFVGEIPPALL---TGKVIFKYDNNPK 104 (517)
Q Consensus 67 -~~l~~L~~l~l~~N~l~~~~P~~~~---~~~~~~~~~~n~~ 104 (517)
..+++|+.|++++|.+++..+..+. ..+..+.+.+|+.
T Consensus 477 ~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 477 LSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp HHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred HhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 5688999999999998643333222 2445566667653
No 427
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.05 E-value=3.9e-05 Score=66.54 Aligned_cols=57 Identities=11% Similarity=0.128 Sum_probs=28.1
Q ss_pred CCcEEEcCCCCCCCC-CCcccCccccceeEecCce-eeecCCCCCCCc----ccccccccccc
Q 010131 24 ALTELWLDGNFLTGP-LPDMSRLIDLRIVHLENNE-LTGSLPSYMGSL----PNLQELHIENN 80 (517)
Q Consensus 24 ~L~~L~l~~N~l~~~-~p~~~~l~~L~~l~l~~n~-l~~~~p~~~~~l----~~L~~l~l~~N 80 (517)
+|+.|||+++.++.. +..+..+++|+.|+|++|. ++..-=..++.+ ++|++|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C 124 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISC 124 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCC
Confidence 466666666665543 2225556666666666653 442111112222 24666666655
No 428
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=96.93 E-value=0.00024 Score=74.83 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=60.3
Q ss_pred CceecCCCCccccc----CCccccCCCCCcEEEcCCCCCCCC----CCc-ccCccccceeEecCceeeecCCCCCCCccc
Q 010131 1 MARCALSGKNLKGE----IPPELKNMEALTELWLDGNFLTGP----LPD-MSRLIDLRIVHLENNELTGSLPSYMGSLPN 71 (517)
Q Consensus 1 l~~L~l~~n~~~~~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~-~~~l~~L~~l~l~~n~l~~~~p~~~~~l~~ 71 (517)
|++|+|++|.+++. ++..+.++++|+.|+|++|.+++. ++. +.++++|+.|+|++|.+. .+|..+..+++
T Consensus 166 L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~~~~~~ 244 (592)
T 3ogk_B 166 IKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFFKAAAN 244 (592)
T ss_dssp CSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHHHHCTT
T ss_pred CCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHHhhhhH
Confidence 68899999998765 333456788999999999999843 334 567899999999999888 46666777777
Q ss_pred cccccccc
Q 010131 72 LQELHIEN 79 (517)
Q Consensus 72 L~~l~l~~ 79 (517)
|+.|+++.
T Consensus 245 L~~L~l~~ 252 (592)
T 3ogk_B 245 LEEFCGGS 252 (592)
T ss_dssp CCEEEECB
T ss_pred HHhhcccc
Confidence 77777765
No 429
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.92 E-value=0.0013 Score=64.75 Aligned_cols=73 Identities=14% Similarity=0.189 Sum_probs=44.1
Q ss_pred cccCCCCceEEEEEEecC---------CcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCC-ccccceeeecCCeeEEEE
Q 010131 201 KKIGKGSFGSVYYGKMKD---------GKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRN-LVPLIGYCEEEHQRILVY 270 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~n-iv~~~~~~~~~~~~~lv~ 270 (517)
+.++.|....+|+....+ ++.+++|+....... ......|..+++.+...+ +.++++.+ . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 467888888999998764 268999987543221 112356888888774333 34565544 2 36899
Q ss_pred EecCCCCH
Q 010131 271 EYMHNGTL 278 (517)
Q Consensus 271 e~~~~gsL 278 (517)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987543
No 430
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.83 E-value=8.5e-05 Score=78.31 Aligned_cols=64 Identities=16% Similarity=0.272 Sum_probs=36.3
Q ss_pred CCCCCcEEEcCCCCCCCCCCc-cc-CccccceeEecCc-eeeec-CCCCCCCcccccccccccccccC
Q 010131 21 NMEALTELWLDGNFLTGPLPD-MS-RLIDLRIVHLENN-ELTGS-LPSYMGSLPNLQELHIENNSFVG 84 (517)
Q Consensus 21 ~l~~L~~L~l~~N~l~~~~p~-~~-~l~~L~~l~l~~n-~l~~~-~p~~~~~l~~L~~l~l~~N~l~~ 84 (517)
.+++|+.|+|++|.+++..+. +. .+++|+.|+|++| .++.. ++..+.++++|++|++++|.+++
T Consensus 103 ~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~ 170 (594)
T 2p1m_B 103 SYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDD 170 (594)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEEC
T ss_pred hCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCC
Confidence 456666666666666655443 43 4666666666666 34321 33333356666666666666554
No 431
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.74 E-value=0.0041 Score=61.54 Aligned_cols=142 Identities=18% Similarity=0.192 Sum_probs=83.0
Q ss_pred cccCCCCceEEEEEEecC--------CcEEEEEEecCCCch-----------h-------HHHHHHHHHHHhcCC-CCCc
Q 010131 201 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSH-----------R-------TQQFVTEVALLSRIH-HRNL 253 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~-----------~-------~~~~~~E~~~l~~l~-h~ni 253 (517)
+.|..|-...+|+....+ ++.|.+++....... + .+....|..+++.+. +.-.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999998764 368999987543211 0 112335888888884 4345
Q ss_pred cccceeeecCCeeEEEEEecCCCCHHh--H---------------hhccC--CCCccC--HHHHHHHHHHHH--------
Q 010131 254 VPLIGYCEEEHQRILVYEYMHNGTLRD--R---------------LHGSV--NQKPLD--WLTRLQIAHDAA-------- 304 (517)
Q Consensus 254 v~~~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~--~~~~l~--~~~~~~i~~~ia-------- 304 (517)
.++++++.. .+|+||++|-+|.. + +|... -..... +..+.++..++.
T Consensus 138 Pkl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~ 213 (401)
T 3f2s_A 138 PKLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEES 213 (401)
T ss_dssp CCEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHH
T ss_pred CeEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchh
Confidence 566776643 28999998754421 1 11110 011122 234433433321
Q ss_pred --------------HHHH----HHhc-CCCCCcEecCCCCCCeEeCCC------CcEEEccccCccc
Q 010131 305 --------------KGLE----YLHT-GCNPGIIHRDVKSSNILLDIN------MRAKVSDFGLSRQ 346 (517)
Q Consensus 305 --------------~aL~----~LH~-~~~~~ivH~dlk~~Nill~~~------~~~kl~Dfg~a~~ 346 (517)
.-+. +|.. .....++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 214 ~~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 214 RIKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 2222 223578999999999999877 7899999987653
No 432
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=96.68 E-value=0.00019 Score=70.48 Aligned_cols=85 Identities=15% Similarity=0.239 Sum_probs=58.6
Q ss_pred CceecCCCCcccccCCcccc--CCCCCcEEEcCC--CCCCCC--C----Ccc--cCccccceeEecCceeeecCCCCC--
Q 010131 1 MARCALSGKNLKGEIPPELK--NMEALTELWLDG--NFLTGP--L----PDM--SRLIDLRIVHLENNELTGSLPSYM-- 66 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~--~l~~L~~L~l~~--N~l~~~--~----p~~--~~l~~L~~l~l~~n~l~~~~p~~~-- 66 (517)
|+.|+|+.|.++......+. .+++|+.|+|+. |...+. + +.+ ..+++|+.|+|.+|.+++..+..+
T Consensus 195 L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~ 274 (362)
T 2ra8_A 195 LKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLE 274 (362)
T ss_dssp CSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHH
T ss_pred CcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHh
Confidence 67899988887654444454 689999999863 222221 1 122 357899999999999875433322
Q ss_pred -CCcccccccccccccccCC
Q 010131 67 -GSLPNLQELHIENNSFVGE 85 (517)
Q Consensus 67 -~~l~~L~~l~l~~N~l~~~ 85 (517)
..+++|+.|+|+.|.+.+.
T Consensus 275 a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 275 SDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp CSSGGGCSEEECCSSCCBHH
T ss_pred CccCCCCCEEECCCCCCChH
Confidence 3578999999999998853
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.63 E-value=0.002 Score=53.04 Aligned_cols=55 Identities=27% Similarity=0.389 Sum_probs=28.4
Q ss_pred eeEecCceee-ecCCCCCCCcccccccccccccccCCCCccccc---cceeeeccCCCcccc
Q 010131 50 IVHLENNELT-GSLPSYMGSLPNLQELHIENNSFVGEIPPALLT---GKVIFKYDNNPKLHK 107 (517)
Q Consensus 50 ~l~l~~n~l~-~~~p~~~~~l~~L~~l~l~~N~l~~~~P~~~~~---~~~~~~~~~n~~~~~ 107 (517)
.++.+++.|+ ..+|..+. ++|+.|+|++|+|+ .+|...+. .+..+.+.+|||.|+
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~Cd 70 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWRCD 70 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCBCS
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCeecc
Confidence 4555555554 34444322 24556666666666 55555433 233445566666654
No 434
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.59 E-value=0.003 Score=62.96 Aligned_cols=97 Identities=14% Similarity=0.159 Sum_probs=63.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCC-----CCCCc-ccCccccceeEecCceeeecCC-CCCCCccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLT-----GPLPD-MSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQ 73 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~-----~~~p~-~~~l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~ 73 (517)
|+.+.| .|+++..-+..|.++++|+.|+|.+|.+. ...+. |.+|++|+.+.|.+ .++ .|+ ..|.++.+|+
T Consensus 250 L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~~-~i~-~I~~~aF~~c~~L~ 326 (401)
T 4fdw_A 250 ITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIPE-SIR-ILGQGLLGGNRKVT 326 (401)
T ss_dssp CSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCCT-TCC-EECTTTTTTCCSCC
T ss_pred ccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeCC-ceE-EEhhhhhcCCCCcc
Confidence 456666 45566444567788888888888888776 23333 88888888888884 466 444 4577788888
Q ss_pred ccccccccccCCCCccccc--cceeeeccCC
Q 010131 74 ELHIENNSFVGEIPPALLT--GKVIFKYDNN 102 (517)
Q Consensus 74 ~l~l~~N~l~~~~P~~~~~--~~~~~~~~~n 102 (517)
.++|.+| ++ .++...+. .+..+.+.+|
T Consensus 327 ~l~lp~~-l~-~I~~~aF~~~~L~~l~l~~n 355 (401)
T 4fdw_A 327 QLTIPAN-VT-QINFSAFNNTGIKEVKVEGT 355 (401)
T ss_dssp EEEECTT-CC-EECTTSSSSSCCCEEEECCS
T ss_pred EEEECcc-cc-EEcHHhCCCCCCCEEEEcCC
Confidence 8888554 55 56554433 3344455555
No 435
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=96.29 E-value=0.0042 Score=61.83 Aligned_cols=87 Identities=15% Similarity=0.133 Sum_probs=54.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceee-----ecCCCCCCCcccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELT-----GSLPSYMGSLPNLQE 74 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~-----~~~p~~~~~l~~L~~ 74 (517)
|+.|+|.+| ++..-...|.+ .+|+.++| .|.++...+. |.++++|+.+.+.+|.+. ..-+..|.++++|+.
T Consensus 228 L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~ 304 (401)
T 4fdw_A 228 LKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLAR 304 (401)
T ss_dssp CCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCE
T ss_pred CCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCe
Confidence 456666654 44222334545 67888888 3556655554 778888888888777654 233345777778888
Q ss_pred cccccccccCCCCccccc
Q 010131 75 LHIENNSFVGEIPPALLT 92 (517)
Q Consensus 75 l~l~~N~l~~~~P~~~~~ 92 (517)
+++. |.++ .++...+.
T Consensus 305 l~l~-~~i~-~I~~~aF~ 320 (401)
T 4fdw_A 305 FEIP-ESIR-ILGQGLLG 320 (401)
T ss_dssp ECCC-TTCC-EECTTTTT
T ss_pred EEeC-CceE-EEhhhhhc
Confidence 8877 4466 56665443
No 436
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=95.99 E-value=0.0006 Score=66.92 Aligned_cols=83 Identities=17% Similarity=0.143 Sum_probs=56.1
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-cc--CccccceeEecC--ceeeec-----CCCCC--CC
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MS--RLIDLRIVHLEN--NELTGS-----LPSYM--GS 68 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~--~l~~L~~l~l~~--n~l~~~-----~p~~~--~~ 68 (517)
|++|+|++|.-. .+|. +. +++|+.|+|..|.++...-. +. .+++|+.|+|+. |...|. +...+ ..
T Consensus 174 L~~L~L~g~~~l-~l~~-~~-~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~ 250 (362)
T 2ra8_A 174 LNNLKIKGTNNL-SIGK-KP-RPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDR 250 (362)
T ss_dssp CCEEEEECCBTC-BCCS-CB-CTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTT
T ss_pred CcEEEEeCCCCc-eecc-cc-CCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCC
Confidence 688999888322 3444 43 89999999999887654332 33 789999999964 222111 11122 35
Q ss_pred cccccccccccccccCCC
Q 010131 69 LPNLQELHIENNSFVGEI 86 (517)
Q Consensus 69 l~~L~~l~l~~N~l~~~~ 86 (517)
+++|+.|++.+|.+....
T Consensus 251 ~p~Lr~L~L~~~~i~~~~ 268 (362)
T 2ra8_A 251 FPNLKWLGIVDAEEQNVV 268 (362)
T ss_dssp CTTCCEEEEESCTTHHHH
T ss_pred CCCcCEEeCCCCCCchHH
Confidence 789999999999987443
No 437
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.79 E-value=0.001 Score=58.71 Aligned_cols=80 Identities=15% Similarity=0.196 Sum_probs=44.5
Q ss_pred CceecCCCC-ccccc----CCccccCCCCCcEEEcCCCCCCCCC----Cc-ccCccccceeEecCceeeec----CCCCC
Q 010131 1 MARCALSGK-NLKGE----IPPELKNMEALTELWLDGNFLTGPL----PD-MSRLIDLRIVHLENNELTGS----LPSYM 66 (517)
Q Consensus 1 l~~L~l~~n-~~~~~----~p~~~~~l~~L~~L~l~~N~l~~~~----p~-~~~l~~L~~l~l~~n~l~~~----~p~~~ 66 (517)
|++|+|++| +|... +.+.+..-+.|+.|+|++|+|...- .+ +..-+.|+.|+|++|+|+.. +-..+
T Consensus 43 L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL 122 (197)
T 1pgv_A 43 LKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRST 122 (197)
T ss_dssp CCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHT
T ss_pred ccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHH
Confidence 456677664 54421 3334454566777777777776421 22 33455677777777776621 22334
Q ss_pred CCcccccccccccc
Q 010131 67 GSLPNLQELHIENN 80 (517)
Q Consensus 67 ~~l~~L~~l~l~~N 80 (517)
..-+.|+.|+|++|
T Consensus 123 ~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 123 LVTQSIVEFKADNQ 136 (197)
T ss_dssp TTTCCCSEEECCCC
T ss_pred hhCCceeEEECCCC
Confidence 44456777777654
No 438
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.49 E-value=0.042 Score=54.80 Aligned_cols=140 Identities=14% Similarity=0.183 Sum_probs=83.2
Q ss_pred cccCCCCceEEEEEEecC--------CcEEEEEEecCCCchhHHHHHHHHHHHhcCC-CCCccccceeeecCCeeEEEEE
Q 010131 201 KKIGKGSFGSVYYGKMKD--------GKEVAVKIMADSCSHRTQQFVTEVALLSRIH-HRNLVPLIGYCEEEHQRILVYE 271 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-h~niv~~~~~~~~~~~~~lv~e 271 (517)
+.+..|....+|+....+ ++.+++|+....... .-...+|..+++.+. +.-..++++.+. -++|+|
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADFP----EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEEE
Confidence 467778888999998763 578999986543211 112346888888774 322345555332 378999
Q ss_pred ecCCCCHHh--H---------------hhcc-------C---CCCccCHHHHHHHHHHH-------------------HH
Q 010131 272 YMHNGTLRD--R---------------LHGS-------V---NQKPLDWLTRLQIAHDA-------------------AK 305 (517)
Q Consensus 272 ~~~~gsL~~--~---------------l~~~-------~---~~~~l~~~~~~~i~~~i-------------------a~ 305 (517)
|++|..|.. . +|.. . ...+..+.++.++..++ ..
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999865321 0 1110 0 11111244444443322 12
Q ss_pred HHHHHhc---------------------CCCCCcEecCCCCCCeEeCCCCcEEEccccCccc
Q 010131 306 GLEYLHT---------------------GCNPGIIHRDVKSSNILLDINMRAKVSDFGLSRQ 346 (517)
Q Consensus 306 aL~~LH~---------------------~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~~ 346 (517)
.+.+|.+ .....++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 2333321 11356899999999999 7788999999998754
No 439
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=93.81 E-value=0.0095 Score=51.46 Aligned_cols=81 Identities=9% Similarity=0.056 Sum_probs=60.3
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCC-CCCCC-CcccCc----cccceeEecCce-eeecCCCCCCCccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNF-LTGPL-PDMSRL----IDLRIVHLENNE-LTGSLPSYMGSLPNLQ 73 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~-l~~~~-p~~~~l----~~L~~l~l~~n~-l~~~~p~~~~~l~~L~ 73 (517)
|+.||||++.++..--..+.++++|+.|+|+++. ++..- ..++.+ ++|+.|+|++|. +|..--..+..+++|+
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~L~ 142 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRNLK 142 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTTCC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCCCC
Confidence 5789999999875544567889999999999985 66532 225543 479999999985 7632223467889999
Q ss_pred cccccccc
Q 010131 74 ELHIENNS 81 (517)
Q Consensus 74 ~l~l~~N~ 81 (517)
.|+++++.
T Consensus 143 ~L~L~~c~ 150 (176)
T 3e4g_A 143 YLFLSDLP 150 (176)
T ss_dssp EEEEESCT
T ss_pred EEECCCCC
Confidence 99999875
No 440
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=93.77 E-value=0.0034 Score=55.39 Aligned_cols=82 Identities=16% Similarity=0.176 Sum_probs=55.9
Q ss_pred CceecCCCCcccccCCcc----ccCCCCCcEEEcCCCCCCCCC----Cc-ccCccccceeEecCce---eee----cCCC
Q 010131 1 MARCALSGKNLKGEIPPE----LKNMEALTELWLDGNFLTGPL----PD-MSRLIDLRIVHLENNE---LTG----SLPS 64 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~----~~~l~~L~~L~l~~N~l~~~~----p~-~~~l~~L~~l~l~~n~---l~~----~~p~ 64 (517)
|+.|+|++|+|...-... +..-++|+.|+|++|+|+..- -+ +..-+.|+.|+|++|. +.. .+..
T Consensus 72 L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~ 151 (197)
T 1pgv_A 72 IEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQVEMDMMM 151 (197)
T ss_dssp CCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHHHHHHHHH
T ss_pred cCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHHHHHHHHH
Confidence 689999999998543333 445589999999999998742 23 5556779999999763 331 1333
Q ss_pred CCCCcccccccccccccc
Q 010131 65 YMGSLPNLQELHIENNSF 82 (517)
Q Consensus 65 ~~~~l~~L~~l~l~~N~l 82 (517)
.+..-+.|+.|+++.|.+
T Consensus 152 aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 152 AIEENESLLRVGISFASM 169 (197)
T ss_dssp HHHHCSSCCEEECCCCCH
T ss_pred HHHhCCCcCeEeccCCCc
Confidence 344456677777765544
No 441
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.68 E-value=0.21 Score=49.48 Aligned_cols=30 Identities=30% Similarity=0.383 Sum_probs=25.2
Q ss_pred CcEecCCCCCCeEe------CCCCcEEEccccCccc
Q 010131 317 GIIHRDVKSSNILL------DINMRAKVSDFGLSRQ 346 (517)
Q Consensus 317 ~ivH~dlk~~Nill------~~~~~~kl~Dfg~a~~ 346 (517)
.++|+|+.+.||++ +++..++++||.+|..
T Consensus 245 vfcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 245 VFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eeEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 46799999999999 4567799999998764
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=93.61 E-value=0.072 Score=52.66 Aligned_cols=68 Identities=12% Similarity=0.081 Sum_probs=38.2
Q ss_pred cccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCC-CCCCCcccccccccccccccCCCCccc
Q 010131 18 ELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHIENNSFVGEIPPAL 90 (517)
Q Consensus 18 ~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~l~l~~N~l~~~~P~~~ 90 (517)
.|..+.+|+.+.+.++ ++..... |.++.+|+.++|.++ ++ .|+ ..|.++.+|+.+++..| ++ .|+...
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~a 361 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS-LR-KIGANA 361 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT-CC-EECTTT
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc-cc-EehHHH
Confidence 3556666777766544 4443333 666667777666544 44 333 34666666666666554 44 444433
No 443
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=93.46 E-value=0.12 Score=50.72 Aligned_cols=59 Identities=19% Similarity=0.147 Sum_probs=27.6
Q ss_pred cccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCC-CCCCCcccccccccc
Q 010131 18 ELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHIE 78 (517)
Q Consensus 18 ~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~l~l~ 78 (517)
.|.++.+|+.+.+..+ ++..... |.++.+|+.+.+.+|.++ .|+ ..|.++.+|+.+.|.
T Consensus 258 aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF~~c~~L~~i~lp 318 (379)
T 4h09_A 258 LLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVFMDCVKLSSVTLP 318 (379)
T ss_dssp TTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCC-EECTTTTTTCTTCCEEECC
T ss_pred ccceeehhcccccccc-ceeccccccccccccccccccccccc-eehhhhhcCCCCCCEEEcC
Confidence 3444555555555432 3322222 555555555555555544 332 234455555555553
No 444
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=93.22 E-value=0.11 Score=51.23 Aligned_cols=95 Identities=14% Similarity=0.225 Sum_probs=61.6
Q ss_pred ceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCC-CCCCCccccccccccc
Q 010131 2 ARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHIEN 79 (517)
Q Consensus 2 ~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~l~l~~ 79 (517)
+.+.+.++..+ .-...|.++++|+.+.+. +.++..... |.++.+|+.+.|..| ++ .|. ..|.++.+|+.+.+..
T Consensus 268 ~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L~~i~ip~ 343 (394)
T 4gt6_A 268 ASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQLERIAIPS 343 (394)
T ss_dssp CEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEEECT
T ss_pred cEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCCCEEEECc
Confidence 44555444332 334467788889999886 456655555 888889999998765 55 444 4577888898888864
Q ss_pred ccccCCCCccccc---cceeeeccCC
Q 010131 80 NSFVGEIPPALLT---GKVIFKYDNN 102 (517)
Q Consensus 80 N~l~~~~P~~~~~---~~~~~~~~~n 102 (517)
+ ++ .|+...+. .+..+.+.++
T Consensus 344 s-v~-~I~~~aF~~C~~L~~i~~~~~ 367 (394)
T 4gt6_A 344 S-VT-KIPESAFSNCTALNNIEYSGS 367 (394)
T ss_dssp T-CC-BCCGGGGTTCTTCCEEEESSC
T ss_pred c-cC-EEhHhHhhCCCCCCEEEECCc
Confidence 4 66 67665443 3444555554
No 445
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=92.78 E-value=0.28 Score=48.26 Aligned_cols=72 Identities=11% Similarity=0.177 Sum_probs=49.0
Q ss_pred CccccCCCCCcEEEcCCCCCCCCCCcccCccccceeEecCceeeecCCC-CCCCcccccccccccccccCCCCcccc
Q 010131 16 PPELKNMEALTELWLDGNFLTGPLPDMSRLIDLRIVHLENNELTGSLPS-YMGSLPNLQELHIENNSFVGEIPPALL 91 (517)
Q Consensus 16 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~l~~L~~l~l~~n~l~~~~p~-~~~~l~~L~~l~l~~N~l~~~~P~~~~ 91 (517)
...|.+++.|+.+.+.++..+-.--.|.++..|+.+.+. +.++ .++. .|.++.+|+.++|..| ++ .|....+
T Consensus 258 ~~aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~-~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF 330 (394)
T 4gt6_A 258 THAFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRIT-ELPESVFAGCISLKSIDIPEG-IT-QILDDAF 330 (394)
T ss_dssp TTTTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCC-EECTTTTTTCTTCCEEECCTT-CC-EECTTTT
T ss_pred cceeeecccccEEecccccceecCcccccccccccccCC-Cccc-ccCceeecCCCCcCEEEeCCc-cc-EehHhHh
Confidence 345778888999998876554222238888899999886 4455 4444 4778888998888754 55 4555443
No 446
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=91.74 E-value=0.3 Score=47.75 Aligned_cols=71 Identities=17% Similarity=0.297 Sum_probs=44.3
Q ss_pred ccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCC-CCCCCcccccccccccccccCCCCcccc
Q 010131 17 PELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHIENNSFVGEIPPALL 91 (517)
Q Consensus 17 ~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~l~l~~N~l~~~~P~~~~ 91 (517)
..|.++..|+.+.+..+ ++..-.. |.++.+|+.+.+..+ ++ .++ ..|..+.+|+.+.+.+|.++ .|+...+
T Consensus 234 ~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~-~i~~~aF~~c~~L~~i~l~~~~i~-~I~~~aF 306 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VK-TVPYLLCSGCSNLTKVVMDNSAIE-TLEPRVF 306 (379)
T ss_dssp TTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CS-EECTTTTTTCTTCCEEEECCTTCC-EECTTTT
T ss_pred ccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ce-eccccccccccccccccccccccc-eehhhhh
Confidence 44566777777777665 4444343 677777777777554 44 333 34666777777777777766 5655443
No 447
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=90.76 E-value=0.21 Score=49.26 Aligned_cols=76 Identities=11% Similarity=0.058 Sum_probs=57.4
Q ss_pred CceecCCCCcccccCCccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecCceeeecCC-CCCCCcccccccccc
Q 010131 1 MARCALSGKNLKGEIPPELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLENNELTGSLP-SYMGSLPNLQELHIE 78 (517)
Q Consensus 1 l~~L~l~~n~~~~~~p~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~p-~~~~~l~~L~~l~l~ 78 (517)
|+.+.+.++ ++..-...|.++++|+.++|.++ ++..-.. |.++.+|+.+.|..| ++ .|+ ..|.++++|+.+++.
T Consensus 299 L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~lp 374 (394)
T 4fs7_A 299 LTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LR-KIGANAFQGCINLKKVELP 374 (394)
T ss_dssp CCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CC-EECTTTBTTCTTCCEEEEE
T ss_pred ccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-cc-EehHHHhhCCCCCCEEEEC
Confidence 455666544 55333456889999999999855 6665555 999999999999887 66 444 468899999999987
Q ss_pred cc
Q 010131 79 NN 80 (517)
Q Consensus 79 ~N 80 (517)
.|
T Consensus 375 ~~ 376 (394)
T 4fs7_A 375 KR 376 (394)
T ss_dssp GG
T ss_pred CC
Confidence 55
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=84.20 E-value=0.12 Score=52.13 Aligned_cols=59 Identities=8% Similarity=0.086 Sum_probs=17.1
Q ss_pred hcccCCCCceEEEEEEecC-CcEEEE------EEecCCC--chhHHHHHHHHHHHhcCCCCCccccceeee
Q 010131 200 CKKIGKGSFGSVYYGKMKD-GKEVAV------KIMADSC--SHRTQQFVTEVALLSRIHHRNLVPLIGYCE 261 (517)
Q Consensus 200 ~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~ 261 (517)
.+.|| ||.||+|.+.. ..+||| |..+... ......|.+|..+++.++|||+++.+++..
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 46676 99999998874 367888 7655422 223356888999999999999999988653
No 449
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=83.58 E-value=0.6 Score=29.59 Aligned_cols=25 Identities=32% Similarity=0.460 Sum_probs=10.3
Q ss_pred eeeehhhHHHHHHHHHHHHHhhhhh
Q 010131 118 ILGTSIGVLAILLVLFLCSLIVLRK 142 (517)
Q Consensus 118 i~~~~~~~~~~~lvl~l~~~~~~~~ 142 (517)
|.+.+++.+++++++.++.++++|+
T Consensus 13 IA~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 13 IATGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp STHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeehhHHHHHHHHHHHHHHHHhhh
Confidence 3344444344433444444444443
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=82.73 E-value=3.4 Score=36.65 Aligned_cols=115 Identities=11% Similarity=0.096 Sum_probs=75.8
Q ss_pred CCCCccccceeeecCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHH-HHhcCCCCCcEecCCCCCC
Q 010131 249 HHRNLVPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLE-YLHTGCNPGIIHRDVKSSN 327 (517)
Q Consensus 249 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~-~LH~~~~~~ivH~dlk~~N 327 (517)
.||++ -...-.+++...+.|+.-+++.=...+ ...+...+++++.+|+.... ++++ -+|--++|+|
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i------~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P~N 114 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAI------RKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCPEN 114 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHH------HTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCGGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHH------HhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeCce
Confidence 57777 334445666666667654333222233 24678889999999988776 5543 5788899999
Q ss_pred eEeCCCCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCC
Q 010131 328 ILLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 399 (517)
Q Consensus 328 ill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~ 399 (517)
+++|.++.+++.-.|.- +-++|..+ +..-=.-.+=+++..++.++..|.
T Consensus 115 L~f~~~~~p~i~hRGi~------------------~~lpP~e~-----~ee~fl~qyKali~all~~K~~Fe 163 (219)
T 4ano_A 115 LMFNRALEPFFLHVGVK------------------ESLPPDEW-----DDERLLREVKATVLALTEGEYRFD 163 (219)
T ss_dssp EEECTTCCEEESCCEET------------------TTBSSCSC-----CHHHHHHHHHHHHHHHTTCSSCHH
T ss_pred EEEeCCCcEEEEEcCCc------------------ccCCCCCC-----CHHHHHHHHHHHHHHHHcCCCCHH
Confidence 99999999999876643 23344322 111112356678888888888775
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=82.63 E-value=0.61 Score=29.50 Aligned_cols=26 Identities=31% Similarity=0.364 Sum_probs=10.9
Q ss_pred eeeehhhHHHHHHHHHHHHHhhhhhh
Q 010131 118 ILGTSIGVLAILLVLFLCSLIVLRKL 143 (517)
Q Consensus 118 i~~~~~~~~~~~lvl~l~~~~~~~~~ 143 (517)
|.+.+++.+++++++.++.++++|++
T Consensus 12 IA~gVVgGv~~v~ii~~~~~~~~RRR 37 (44)
T 2l2t_A 12 IAAGVIGGLFILVIVGLTFAVYVRRK 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeehHHHHHHHHHHHHHHHHhhhh
Confidence 33444443444444444444444443
No 452
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=82.24 E-value=2.3 Score=37.62 Aligned_cols=116 Identities=11% Similarity=0.071 Sum_probs=77.4
Q ss_pred CCCCccccceeeecCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHHHHHHHHHhcCCCCCcEecCCCCCCe
Q 010131 249 HHRNLVPLIGYCEEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDAAKGLEYLHTGCNPGIIHRDVKSSNI 328 (517)
Q Consensus 249 ~h~niv~~~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~ia~aL~~LH~~~~~~ivH~dlk~~Ni 328 (517)
.||++++. .+-.+++...+.|+.-+ +..++-. -...+...+++++.+|+....++++ -+|--++|+|+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~----ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL 110 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDN----IKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDEL 110 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGG----GGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHH----HHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceE
Confidence 57888866 45555665555555433 2222221 2357888999999999998866664 47889999999
Q ss_pred EeCCCCcEEEccccCccccCCCCcccccccccCCCCcCCCccCCCCCCccceehhHHHHHHHHHhCCCCCC
Q 010131 329 LLDINMRAKVSDFGLSRQAEEDLTHISSVARGTVGYLDPEYYGNQQLTEKSDVYSFGVVLLELISGKKPVS 399 (517)
Q Consensus 329 ll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~slG~~l~elltg~~p~~ 399 (517)
+++.++.+++.=.|+... ++|.. .+...=.-.+=+++..+++++..|.
T Consensus 111 ~f~~~~~p~i~~RGik~~------------------l~P~~-----~~ee~fL~qyKAliiall~~K~~Fe 158 (215)
T 4ann_A 111 FFTRDGLPIAKTRGLQNV------------------VDPLP-----VSEAEFLTRYKALVICAFNEKQSFD 158 (215)
T ss_dssp EECTTSCEEESCCEETTT------------------BSCCC-----CCHHHHHHHHHHHHHHHHCTTCCHH
T ss_pred EEcCCCCEEEEEccCccC------------------CCCCC-----CCHHHHHHHHHHHHHHHHcCCCCHH
Confidence 999999999986664322 22321 1222223356788999999998885
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=80.06 E-value=0.63 Score=29.37 Aligned_cols=7 Identities=29% Similarity=0.786 Sum_probs=3.4
Q ss_pred eeeehhh
Q 010131 118 ILGTSIG 124 (517)
Q Consensus 118 i~~~~~~ 124 (517)
+.+.++|
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 4444555
No 454
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=61.23 E-value=1.3e+02 Score=31.10 Aligned_cols=84 Identities=12% Similarity=0.112 Sum_probs=49.9
Q ss_pred cccceeeecCCeeEEEEEecCCCCHHhHh----------hccCCCC----ccCHHHHHHHHHHHHH--HHHHHhcCCCCC
Q 010131 254 VPLIGYCEEEHQRILVYEYMHNGTLRDRL----------HGSVNQK----PLDWLTRLQIAHDAAK--GLEYLHTGCNPG 317 (517)
Q Consensus 254 v~~~~~~~~~~~~~lv~e~~~~gsL~~~l----------~~~~~~~----~l~~~~~~~i~~~ia~--aL~~LH~~~~~~ 317 (517)
++.|.+........+ .|++++.++.+.+ ....... ...+..+..++..+|- -+.|+=.
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILG----- 475 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILG----- 475 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHT-----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeee-----
Confidence 444555555444443 5677665554443 3221111 1234555556555543 4556533
Q ss_pred cEecCCCCCCeEeCCCCcEEEccccCcc
Q 010131 318 IIHRDVKSSNILLDINMRAKVSDFGLSR 345 (517)
Q Consensus 318 ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 345 (517)
| ||=+++|||++.+|++.=+|||...
T Consensus 476 i--gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 476 V--GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp C--CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred c--cCCCCcceeEcCCCCEeeeehHHhh
Confidence 3 5778999999999999999999874
No 455
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=53.94 E-value=5.2 Score=24.37 Aligned_cols=18 Identities=22% Similarity=0.194 Sum_probs=8.6
Q ss_pred eeeeehhhHHHHHHHHHH
Q 010131 117 LILGTSIGVLAILLVLFL 134 (517)
Q Consensus 117 ~i~~~~~~~~~~~lvl~l 134 (517)
.+.++++++++.++++..
T Consensus 12 aIAGiVvG~v~gv~li~~ 29 (38)
T 2k1k_A 12 EIVAVIFGLLLGAALLLG 29 (38)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred ceeeeehHHHHHHHHHHH
Confidence 345555555544443333
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=49.93 E-value=78 Score=29.86 Aligned_cols=136 Identities=14% Similarity=0.142 Sum_probs=69.1
Q ss_pred cccCCCCceEEEEEEecCCcEEEEEEecCCCchhHHHHHHHHHHHhcCCCCCcccccee-------------e-------
Q 010131 201 KKIGKGSFGSVYYGKMKDGKEVAVKIMADSCSHRTQQFVTEVALLSRIHHRNLVPLIGY-------------C------- 260 (517)
Q Consensus 201 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~-------------~------- 260 (517)
+..-.|. +-||.+.. ++..|+||-.. ....+.+..++...-.+.-|+.--+.-. +
T Consensus 75 ~~s~~Gs-tgvff~~t-d~~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~Riv~~~~~E~~e~~~~L~~~~~~~~~l 149 (342)
T 1cja_A 75 ERSEKGT-EGLFFVET-ESGVFIVKRST---NIESETFCSLLCMRLGLHAPKVRVVSSNSEEGTNMLECLAAIDKSFRVI 149 (342)
T ss_dssp EECCSTT-SCEEEEEE-SSCEEEEECCT---THHHHHHHHHHHHHHTCCCCCEEEEESSSHHHHHHHHHHHHHCSSSCHH
T ss_pred EeccCCC-CCeEEEEe-CCCEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCeeEEeeCcHHHHHHHHHHHHhhhhhHHH
Confidence 4445555 45555544 47889999431 3334455555555555666652211100 0
Q ss_pred --ecCCeeEEEEEecCCCCHHhHhhccCCCCccCHHHHHHHHHHH--HHHHHHHhcCCCC-CcEe-cCCCCCCeEeCCCC
Q 010131 261 --EEEHQRILVYEYMHNGTLRDRLHGSVNQKPLDWLTRLQIAHDA--AKGLEYLHTGCNP-GIIH-RDVKSSNILLDINM 334 (517)
Q Consensus 261 --~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~l~~~~~~~i~~~i--a~aL~~LH~~~~~-~ivH-~dlk~~Nill~~~~ 334 (517)
......+++|||.+|..|...-... ....+... .+.++ +-++..+....++ +.+. .--.+.|||++.++
T Consensus 150 ~~l~~~~~~l~meyv~G~~L~e~~~~~-~~~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n 224 (342)
T 1cja_A 150 TTLANQANILLMELVRGITLNKLTTTS-APEVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERG 224 (342)
T ss_dssp HHHTTCSEEEEEECCCEEESTTCCSSS-HHHHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBT
T ss_pred HHhhcccceehhhhcCCCccccchhhh-hhhhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCC
Confidence 0122466999999876654422110 00112222 23332 2344444442222 2221 23578999998755
Q ss_pred c-EEEccccCccc
Q 010131 335 R-AKVSDFGLSRQ 346 (517)
Q Consensus 335 ~-~kl~Dfg~a~~ 346 (517)
. +.++|-+.+..
T Consensus 225 ~~~~~IDhn~af~ 237 (342)
T 1cja_A 225 ATVVPIDSKIIPL 237 (342)
T ss_dssp TCEEECSCCCCCC
T ss_pred CeEEEEcCCcccc
Confidence 5 88899887754
No 457
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=48.64 E-value=2.6e+02 Score=29.30 Aligned_cols=45 Identities=24% Similarity=0.158 Sum_probs=31.8
Q ss_pred HHHHHHHHHHH--HHHHHHhcCCCCCcEecCCCCCCeEeCCCCcEEEccccCcc
Q 010131 294 LTRLQIAHDAA--KGLEYLHTGCNPGIIHRDVKSSNILLDINMRAKVSDFGLSR 345 (517)
Q Consensus 294 ~~~~~i~~~ia--~aL~~LH~~~~~~ivH~dlk~~Nill~~~~~~kl~Dfg~a~ 345 (517)
..+..++.++| .-+.|+=. -||=+++|||++.+|++.=+|||...
T Consensus 529 ~ar~nF~~SlA~~Svv~YILG-------lGDRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 529 EVMDTYIKSCAGYCVITYLLG-------VGDRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-------CCCCCTTTEEECTTSCEEECCCCSCT
T ss_pred HHHHHHHHHHHHHHHHHHHcc-------CCCCCCcceEEeCCCCEEEEeehhhh
Confidence 34444555444 33455432 26889999999999999999999874
No 458
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=46.66 E-value=18 Score=22.73 Aligned_cols=30 Identities=23% Similarity=0.335 Sum_probs=18.2
Q ss_pred eeehhhHHHHHHHHHHHHHhhhhhhhcccc
Q 010131 119 LGTSIGVLAILLVLFLCSLIVLRKLRRKIS 148 (517)
Q Consensus 119 ~~~~~~~~~~~lvl~l~~~~~~~~~~~~~~ 148 (517)
.+++.+++..+++++++...++...||+..
T Consensus 11 ~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 11 PSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp SSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred ceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 444445555566666666666677777644
No 459
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=40.03 E-value=44 Score=25.19 Aligned_cols=38 Identities=13% Similarity=0.080 Sum_probs=17.4
Q ss_pred ccccCCCCCcEEEcCCCCCCCCCCc-ccCccccceeEecC
Q 010131 17 PELKNMEALTELWLDGNFLTGPLPD-MSRLIDLRIVHLEN 55 (517)
Q Consensus 17 ~~~~~l~~L~~L~l~~N~l~~~~p~-~~~l~~L~~l~l~~ 55 (517)
..|.++++|+.+.|..+ ++..-.. |.++.+|+.+.+..
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34445555555555543 2222222 55555555555443
No 460
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=38.96 E-value=23 Score=22.30 Aligned_cols=26 Identities=31% Similarity=0.450 Sum_probs=14.8
Q ss_pred hHHHHHHHHHHHHHhhhhhhhccccc
Q 010131 124 GVLAILLVLFLCSLIVLRKLRRKISN 149 (517)
Q Consensus 124 ~~~~~~lvl~l~~~~~~~~~~~~~~~ 149 (517)
+++..+++++++...++...||+..+
T Consensus 15 gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 15 GVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred eehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 34444555555565666677776543
No 461
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=29.08 E-value=67 Score=24.14 Aligned_cols=46 Identities=13% Similarity=0.181 Sum_probs=34.4
Q ss_pred CCCCCCCCc-ccCccccceeEecCceeeecC-CCCCCCcccccccccccc
Q 010131 33 NFLTGPLPD-MSRLIDLRIVHLENNELTGSL-PSYMGSLPNLQELHIENN 80 (517)
Q Consensus 33 N~l~~~~p~-~~~l~~L~~l~l~~n~l~~~~-p~~~~~l~~L~~l~l~~N 80 (517)
..++.+-.. |.++.+|+.+.|..+ ++ .| ...|.++.+|+.+.+...
T Consensus 6 ~~vt~I~~~aF~~c~~L~~i~iP~~-v~-~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 6 EPVVGMDKSLFAGNTVIREITVQPN-IG-LLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCCSSCSCTTTTCTTCCCEEECTT-SS-CCCTTSSTTCTTCCCEEECCS
T ss_pred CccCEecHHHhcCCCCCcEEEcCCc-hh-eEcHHHHhccCCccEEEEcCC
Confidence 445555555 999999999999887 44 44 345889999999988654
Done!