Your job contains 1 sequence.
>010133
MREYWTSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEIDGVN
TNELYNAVQLYLSSSVSISGSRLSLTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVS
PRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSR
GGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGY
LLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCS
ISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSC
CGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYEESDLEDET
LKELEDVVGKAEMTPADISEVLIKNKRDKCKAVRELLETLKVKAEKNVKHGGIIVKNSDY
EEEEQEKRALESPIEGSDIEDANNCEEGDDDHEEKIK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010133
(517 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174502 - symbol:AT5G57480 species:3702 "Arabi... 1868 8.3e-193 1
TAIR|locus:505006520 - symbol:AT4G25835 species:3702 "Ara... 1758 3.8e-181 1
TAIR|locus:2128916 - symbol:AT4G30250 species:3702 "Arabi... 1608 3.0e-165 1
TAIR|locus:2095512 - symbol:AT3G28580 species:3702 "Arabi... 878 6.7e-88 1
TAIR|locus:2178067 - symbol:AATP1 "AAA-ATPase 1" species:... 858 8.9e-86 1
TAIR|locus:2098658 - symbol:AT3G28510 species:3702 "Arabi... 822 5.8e-82 1
TAIR|locus:2178057 - symbol:AT5G40000 species:3702 "Arabi... 528 1.4e-80 2
TAIR|locus:2078007 - symbol:AT3G50940 species:3702 "Arabi... 536 4.1e-79 2
TAIR|locus:2077997 - symbol:BCS1 "cytochrome BC1 synthesi... 539 8.4e-79 2
TAIR|locus:2098648 - symbol:AT3G28540 species:3702 "Arabi... 785 4.8e-78 1
TAIR|locus:1005716649 - symbol:AT2G18193 species:3702 "Ar... 509 1.4e-74 2
TAIR|locus:2175986 - symbol:AT5G17760 species:3702 "Arabi... 463 1.4e-74 2
TAIR|locus:2053109 - symbol:AT2G18190 species:3702 "Arabi... 496 3.2e-73 2
TAIR|locus:2095532 - symbol:AT3G28600 species:3702 "Arabi... 739 3.6e-73 1
TAIR|locus:2095537 - symbol:AT3G28610 species:3702 "Arabi... 732 2.0e-72 1
TAIR|locus:2095502 - symbol:AT3G28570 species:3702 "Arabi... 461 2.9e-72 2
TAIR|locus:2098638 - symbol:AT3G28520 species:3702 "Arabi... 719 4.8e-71 1
TAIR|locus:2175956 - symbol:AT5G17740 species:3702 "Arabi... 459 9.8e-70 2
TAIR|locus:2175946 - symbol:AT5G17730 species:3702 "Arabi... 443 2.3e-68 2
TAIR|locus:2175976 - symbol:AT5G17750 species:3702 "Arabi... 435 2.3e-64 2
TAIR|locus:2037186 - symbol:AT1G43910 species:3702 "Arabi... 638 1.8e-62 1
TAIR|locus:2039981 - symbol:AT2G46620 species:3702 "Arabi... 429 1.4e-60 2
TAIR|locus:2115954 - symbol:AT4G05380 species:3702 "Arabi... 469 1.5e-44 1
TAIR|locus:2086591 - symbol:AT3G29800 species:3702 "Arabi... 291 8.2e-33 2
ASPGD|ASPL0000063397 - symbol:AN7549 species:162425 "Emer... 314 2.1e-29 3
DICTYBASE|DDB_G0291910 - symbol:bcs1lB "mitochondrial cha... 323 6.8e-28 1
DICTYBASE|DDB_G0286765 - symbol:DDB_G0286765 "BCS1-like p... 208 1.3e-24 2
FB|FBgn0032195 - symbol:CG4908 species:7227 "Drosophila m... 190 6.5e-24 2
ASPGD|ASPL0000041452 - symbol:AN3131 species:162425 "Emer... 210 8.1e-23 2
ZFIN|ZDB-GENE-040426-938 - symbol:bcs1l "BCS1-like (yeast... 188 1.8e-22 2
SGD|S000002783 - symbol:BCS1 "Protein translocase and cha... 196 2.1e-22 2
RGD|1359658 - symbol:Bcs1l "BC1 (ubiquinol-cytochrome c r... 176 4.9e-22 2
MGI|MGI:1914071 - symbol:Bcs1l "BCS1-like (yeast)" specie... 176 6.3e-22 2
CGD|CAL0005742 - symbol:orf19.458 species:5476 "Candida a... 185 1.1e-21 2
ASPGD|ASPL0000007908 - symbol:AN6397 species:162425 "Emer... 277 1.2e-21 1
UNIPROTKB|E2RE50 - symbol:BCS1L "Uncharacterized protein"... 174 1.4e-21 2
WB|WBGene00010042 - symbol:bcs-1 species:6239 "Caenorhabd... 193 2.8e-21 2
UNIPROTKB|Q5E9H5 - symbol:BCS1L "Mitochondrial chaperone ... 172 4.8e-21 2
POMBASE|SPAC644.07 - symbol:SPAC644.07 "mitochondrial Rie... 185 9.6e-21 2
UNIPROTKB|Q9Y276 - symbol:BCS1L "Mitochondrial chaperone ... 170 1.3e-20 2
DICTYBASE|DDB_G0289135 - symbol:bcs1lA "mitochondrial cha... 191 1.6e-20 2
UNIPROTKB|I3LFK0 - symbol:BCS1L "Uncharacterized protein"... 174 3.1e-20 2
UNIPROTKB|G4MXF6 - symbol:MGG_15496 "Uncharacterized prot... 264 7.9e-20 1
UNIPROTKB|F1P1Q6 - symbol:BCS1L "Uncharacterized protein"... 180 8.9e-20 2
UNIPROTKB|G4MN83 - symbol:MGG_02058 "Mitochondrial chaper... 253 1.5e-19 2
UNIPROTKB|E1BWG5 - symbol:BCS1L "Uncharacterized protein"... 176 2.6e-19 2
UNIPROTKB|G4MYI1 - symbol:MGG_10383 "Mitochondrial chaper... 170 5.0e-18 2
GENEDB_PFALCIPARUM|PFF0155w - symbol:PFF0155w "bcs1-like ... 243 7.4e-18 1
UNIPROTKB|C6KSN2 - symbol:PFF0155w "Bcs1 protein, putativ... 243 7.4e-18 1
UNIPROTKB|G4NGV5 - symbol:MGG_04018 "Mitochondrial chaper... 240 8.8e-18 2
TAIR|locus:2095467 - symbol:AT3G28560 "AT3G28560" species... 201 2.1e-15 1
TAIR|locus:2115914 - symbol:AT4G05340 species:3702 "Arabi... 190 3.3e-14 1
UNIPROTKB|H7BZF6 - symbol:BCS1L "Mitochondrial chaperone ... 141 1.3e-13 2
UNIPROTKB|H7C492 - symbol:BCS1L "Mitochondrial chaperone ... 146 4.6e-12 2
TIGR_CMR|CJE_1085 - symbol:CJE_1085 "cell division protei... 112 1.1e-09 2
UNIPROTKB|P0C5C0 - symbol:ftsH "ATP-dependent zinc metall... 128 2.8e-09 2
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 114 5.8e-09 4
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 114 5.8e-09 4
UNIPROTKB|C9J1S9 - symbol:BCS1L "Mitochondrial chaperone ... 140 8.9e-09 1
GENEDB_PFALCIPARUM|PFL1925w - symbol:PFL1925w "cell divis... 116 1.0e-08 3
UNIPROTKB|Q8I526 - symbol:PFL1925w "Cell division protein... 116 1.0e-08 3
TIGR_CMR|GSU_1180 - symbol:GSU_1180 "cell division protei... 106 3.8e-08 2
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 111 1.6e-07 2
POMBASE|SPBC543.09 - symbol:yta12 "mitochondrial m-AAA pr... 108 2.1e-07 2
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 103 2.6e-07 2
UNIPROTKB|G4MMM3 - symbol:MGG_16395 "ATP-dependent Zn pro... 124 3.9e-07 2
UNIPROTKB|Q5LNU8 - symbol:ftsH "ATP-dependent zinc metall... 112 4.1e-07 2
TIGR_CMR|SPO_3105 - symbol:SPO_3105 "ATP-dependent metall... 112 4.1e-07 2
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 98 4.8e-07 2
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 99 7.2e-07 3
FB|FBgn0020369 - symbol:Rpt6 "Regulatory particle triple-... 96 8.0e-07 2
TIGR_CMR|GSU_1809 - symbol:GSU_1809 "cell division protei... 104 8.3e-07 2
CGD|CAL0006022 - symbol:RPT6 species:5476 "Candida albica... 96 9.9e-07 2
TAIR|locus:2157637 - symbol:VAR1 "VARIEGATED 1" species:3... 114 1.0e-06 2
UNIPROTKB|Q3AFJ8 - symbol:ftsH "ATP-dependent zinc metall... 97 1.2e-06 2
TIGR_CMR|CHY_0214 - symbol:CHY_0214 "cell division protei... 97 1.2e-06 2
DICTYBASE|DDB_G0272120 - symbol:rcaA "peptidase M41, FtsH... 111 1.3e-06 2
TIGR_CMR|CJE_1259 - symbol:CJE_1259 "cell division protei... 97 1.3e-06 2
TAIR|locus:2036099 - symbol:RPT5B "26S proteasome AAA-ATP... 107 1.5e-06 2
UNIPROTKB|P37476 - symbol:ftsH "ATP-dependent zinc metall... 95 1.5e-06 3
SGD|S000003016 - symbol:RPT6 "ATPase of the 19S regulator... 96 1.6e-06 2
ASPGD|ASPL0000064945 - symbol:AN6988 species:162425 "Emer... 100 1.7e-06 2
TAIR|locus:2174819 - symbol:EMB3144 "EMBRYO DEFECTIVE 314... 104 1.9e-06 2
TIGR_CMR|BA_0064 - symbol:BA_0064 "cell division protein ... 100 2.1e-06 3
GENEDB_PFALCIPARUM|PFL2345c - symbol:PFL2345c "tat-bindin... 93 2.6e-06 2
UNIPROTKB|Q8I4U5 - symbol:PFL2345c "Tat-binding protein h... 93 2.6e-06 2
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 100 2.7e-06 3
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 100 2.7e-06 3
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 99 2.7e-06 2
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 99 2.7e-06 2
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 91 2.7e-06 3
TAIR|locus:2011952 - symbol:FTSH1 "FTSH protease 1" speci... 110 2.9e-06 2
TAIR|locus:2052806 - symbol:VAR2 "VARIEGATED 2" species:3... 104 3.0e-06 2
TIGR_CMR|CBU_1352 - symbol:CBU_1352 "ATP-dependent metall... 97 3.1e-06 3
WB|WBGene00015688 - symbol:C10G11.8 species:6239 "Caenorh... 93 3.4e-06 2
TAIR|locus:2009235 - symbol:FTSH8 "FTSH protease 8" speci... 104 3.6e-06 2
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 96 3.6e-06 2
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 101 4.2e-06 3
TIGR_CMR|DET_0391 - symbol:DET_0391 "ATP-dependent metall... 104 4.3e-06 2
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 91 4.4e-06 2
WARNING: Descriptions of 187 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2174502 [details] [associations]
symbol:AT5G57480 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0465 GO:GO:0017111
EMBL:AB011482 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2687417 IPI:IPI00541799 RefSeq:NP_200556.1
UniGene:At.49428 ProteinModelPortal:Q9FKM3 SMR:Q9FKM3
EnsemblPlants:AT5G57480.1 GeneID:835852 KEGG:ath:AT5G57480
TAIR:At5g57480 InParanoid:Q9FKM3 OMA:HNNSELR PhylomeDB:Q9FKM3
Genevestigator:Q9FKM3 Uniprot:Q9FKM3
Length = 520
Score = 1868 (662.6 bits), Expect = 8.3e-193, P = 8.3e-193
Identities = 374/519 (72%), Positives = 412/519 (79%)
Query: 1 MREYWTSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEIDGVN 60
M+EYWTSLASLLGVLAFCQSL+Q IFPPELRFA LK FNRIF++FSSYCYFDITEIDGVN
Sbjct: 1 MKEYWTSLASLLGVLAFCQSLMQSIFPPELRFAFLKFFNRIFHVFSSYCYFDITEIDGVN 60
Query: 61 TNELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVS 120
TNELYNAVQ TRA+NSS+ITFGLSNNDSI D+FNGV VLWEHVV+
Sbjct: 61 TNELYNAVQLYLSSSVSIAGNRLSLTRAVNSSSITFGLSNNDSIVDTFNGVTVLWEHVVT 120
Query: 121 PRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSR 180
RQTQTF+WRPLPEEKRGFTLRIKKKDK+LIL+SYLD+IME+AN+IRRKNQDRLLYTNSR
Sbjct: 121 QRQTQTFAWRPLPEEKRGFTLRIKKKDKTLILNSYLDYIMERANEIRRKNQDRLLYTNSR 180
Query: 181 GGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGY 240
GGSLDSRGHPWESV FKHPSTF+TLA+DP KK +IM+DLKDFA G FYQKTGRAWKRGY
Sbjct: 181 GGSLDSRGHPWESVPFKHPSTFETLAMDPRKKQQIMDDLKDFAEGQVFYQKTGRAWKRGY 240
Query: 241 LLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCS 300
LLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH+NSELRKLLMKTSSKSIIVIEDIDCS
Sbjct: 241 LLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHSNSELRKLLMKTSSKSIIVIEDIDCS 300
Query: 301 IXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGG----EDGN-NSITLSGLLNFTD 355
I YY+ E R GSGS G E GN N+ITLSGLLNFTD
Sbjct: 301 INLTNRKKNSSNVSSQRS-----YYDAETRNGSGSGSGGSGEEGGNGNTITLSGLLNFTD 355
Query: 356 GLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYXXXX 415
GLWSCCGSE+IFVFTTNHIEKLDPALLRSGRMDMHI+MS+C++P+L ILLKNYLGY
Sbjct: 356 GLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIYMSFCNFPSLKILLKNYLGYGVED 415
Query: 416 XXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETLKVKAEKNVKHGGIIV 475
VV KAEMTPAD+SE LIKN+RDK KA+RELLE LK + E+NVK G +
Sbjct: 416 INGDVLKEMEMVVEKAEMTPADVSEALIKNRRDKEKAIRELLEDLKSRGERNVKDGKLRG 475
Query: 476 KNSDYEE----EEQEKRALESPIEGSDIEDANNCEEGDD 510
+ + E EEQEKRA++S E D D E D+
Sbjct: 476 GSGNLTELEVVEEQEKRAIDSQNEDED-HDEEEIELEDN 513
>TAIR|locus:505006520 [details] [associations]
symbol:AT4G25835 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 EMBL:AY075607 IPI:IPI00532146
RefSeq:NP_567730.1 UniGene:At.32228 ProteinModelPortal:Q8RY66
SMR:Q8RY66 PRIDE:Q8RY66 EnsemblPlants:AT4G25835.1 GeneID:828689
KEGG:ath:AT4G25835 TAIR:At4g25835 InParanoid:Q8RY66 OMA:IMEKANE
PhylomeDB:Q8RY66 ProtClustDB:CLSN2687417 Genevestigator:Q8RY66
Uniprot:Q8RY66
Length = 506
Score = 1758 (623.9 bits), Expect = 3.8e-181, P = 3.8e-181
Identities = 354/517 (68%), Positives = 402/517 (77%)
Query: 1 MREYWTSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEIDGVN 60
M+EYWTSLASLLGVLAFCQSL+ +FPPELRFA KLFN+ F +FS++CYFDITEIDGVN
Sbjct: 1 MKEYWTSLASLLGVLAFCQSLMNSVFPPELRFAISKLFNKFFKLFSTFCYFDITEIDGVN 60
Query: 61 TNELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVS 120
TNELYNAVQ TRA+NSS++TFGLSNNDSI D+FN V V+WEH+V+
Sbjct: 61 TNELYNAVQLYLSSSVSIAGNRLSLTRAVNSSSVTFGLSNNDSIVDTFNSVTVVWEHIVT 120
Query: 121 PRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSR 180
RQTQTF+WRP+PEEKRGFTLRIKKKDK+LILDSYLD+IMEKAN+IRR NQDRLLYTNSR
Sbjct: 121 QRQTQTFAWRPMPEEKRGFTLRIKKKDKNLILDSYLDYIMEKANEIRRLNQDRLLYTNSR 180
Query: 181 GGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGY 240
GGSLDSRG PWESV FKHPSTFDTLA+DP KK +IMEDLKDFA SFY++TGRAWKRGY
Sbjct: 181 GGSLDSRGLPWESVPFKHPSTFDTLAMDPVKKQQIMEDLKDFAECQSFYERTGRAWKRGY 240
Query: 241 LLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCS 300
LLYGPPGTGKSSMIAAMANYL YDIYDLELTEV +NSELRKLLMKTSSKSIIVIEDIDCS
Sbjct: 241 LLYGPPGTGKSSMIAAMANYLRYDIYDLELTEVKSNSELRKLLMKTSSKSIIVIEDIDCS 300
Query: 301 IXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGN-NSITLSGLLNFTDGLWS 359
I Y EPEM GSG +G + G+ N+ITLSGLLNFTDGLWS
Sbjct: 301 INLTNRNKKQSTGS---------YNEPEMLTGSG-LGDDLGDGNTITLSGLLNFTDGLWS 350
Query: 360 CCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYXXXXXXXX 419
CCGSE+IFVFTTNHIEKLDPALLRSGRMDMHI MSYC++ ++ ILL+NYLG+
Sbjct: 351 CCGSERIFVFTTNHIEKLDPALLRSGRMDMHIHMSYCTFSSVKILLRNYLGFEEGDLNDV 410
Query: 420 XXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETLKVKAEKNVKHGGIIVKNSD 479
VV +AE+TPAD+SE LIKN+RDK +AVRELL L+ + E+N K+G V+N
Sbjct: 411 VLKELAEVVDRAEITPADVSEALIKNRRDKERAVRELLVDLRSRVERNEKNGKSRVQNVS 470
Query: 480 YEEEEQEKRALESPI------EGSDIEDANNCEEGDD 510
EE QE RA +S E +IED N C+ DD
Sbjct: 471 LEE--QENRAFDSLYAEENGGEEEEIED-NICKSSDD 504
>TAIR|locus:2128916 [details] [associations]
symbol:AT4G30250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002687 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00517260 RefSeq:NP_194754.2 UniGene:At.65015
ProteinModelPortal:F4JPK8 SMR:F4JPK8 EnsemblPlants:AT4G30250.1
GeneID:829148 KEGG:ath:AT4G30250 Uniprot:F4JPK8
Length = 519
Score = 1608 (571.1 bits), Expect = 3.0e-165, P = 3.0e-165
Identities = 325/529 (61%), Positives = 384/529 (72%)
Query: 1 MREYWTSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEIDGVN 60
M +YWT++ASLLG+LAFCQ+++Q++FPPELR A L RI ++FSS+ YFDITEIDGVN
Sbjct: 1 MSDYWTTMASLLGMLAFCQTIVQLVFPPELRLAFLHFLTRIRHVFSSHIYFDITEIDGVN 60
Query: 61 TNELYNAVQXXXXXXXXXXXXXXXX--------TRALNSSAITFGLSNNDSIYDSFNGVG 112
TNELYNAVQ TR NSS++TFGLSNND I D FNGV
Sbjct: 61 TNELYNAVQLYLSSSVTVNDAVSSSNNNTRLSLTRVPNSSSVTFGLSNNDRITDVFNGVT 120
Query: 113 VLWEHVVSPRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQD 172
+LWEHVV RQ Q+FSWRP+PEEKRGFTL+I K+DK+L+LDSYLD+I+ K+ +IRR+N++
Sbjct: 121 ILWEHVVVQRQVQSFSWRPMPEEKRGFTLQINKRDKALVLDSYLDYIVGKSEEIRRRNEE 180
Query: 173 RLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKT 232
RLLYTNSRG SLD+R HPW+SV FKHPSTFDTLA+DPEKK IMEDL++FANG FYQKT
Sbjct: 181 RLLYTNSRGVSLDARSHPWDSVRFKHPSTFDTLAMDPEKKKRIMEDLREFANGQGFYQKT 240
Query: 233 GRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSII 292
GRAWKRGYLLYGPPGTGKSS+IAAMANYLGYDIYDLELTEV NNSELRKLLMKTSSKSII
Sbjct: 241 GRAWKRGYLLYGPPGTGKSSLIAAMANYLGYDIYDLELTEVQNNSELRKLLMKTSSKSII 300
Query: 293 VIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGNNSITLSGLLN 352
VIEDIDCSI Y+P + GSG E+ +S+TLSGLLN
Sbjct: 301 VIEDIDCSISLTKRGKNKKKNGSYE-------YDPGLTNGSGL---EEPGSSVTLSGLLN 350
Query: 353 FTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYX 412
FTDGLWSCCGSEKIFVFTTNHIEKLD AL+RSGRMDMH+ M +C +PAL ILLKNYL
Sbjct: 351 FTDGLWSCCGSEKIFVFTTNHIEKLDSALMRSGRMDMHVHMGFCKFPALKILLKNYLRLE 410
Query: 413 XXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETLKVKAEKNVKHGG 472
V +AE+TPAD+SEVLI+N+ D KAVRE++ LK + K K G
Sbjct: 411 EEDMDSVVLKEMEECVEEAEITPADVSEVLIRNRSDAEKAVREIVSVLKERVVKRRKSVG 470
Query: 473 IIVKNSDYEEEE------QEKRALESPIEGSDIEDANNCEEGDDDHEEK 515
+ K + +EEE QEKRAL+SP + EE ++D +EK
Sbjct: 471 LKKKKQEGQEEEEEAEEEQEKRALDSPNRRNREVCGFREEEEEEDEKEK 519
>TAIR|locus:2095512 [details] [associations]
symbol:AT3G28580 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;RCA]
[GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009723
"response to ethylene stimulus" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005524 GO:GO:0009737
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP000420 HSSP:Q9LCZ4 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 ProtClustDB:CLSN2685235
EMBL:AY072076 IPI:IPI00523143 RefSeq:NP_189499.1 UniGene:At.42770
ProteinModelPortal:Q9LJJ7 SMR:Q9LJJ7 STRING:Q9LJJ7
EnsemblPlants:AT3G28580.1 GeneID:822488 KEGG:ath:AT3G28580
TAIR:At3g28580 InParanoid:Q9LJJ7 OMA:PRSKTKD PhylomeDB:Q9LJJ7
ArrayExpress:Q9LJJ7 Genevestigator:Q9LJJ7 Uniprot:Q9LJJ7
Length = 500
Score = 878 (314.1 bits), Expect = 6.7e-88, P = 6.7e-88
Identities = 200/512 (39%), Positives = 283/512 (55%)
Query: 1 MREYWTSLASLLGVLAFCQSLLQVIFPPELRFASLKLF-NRIFNIFSSYCYFDITEIDGV 59
M + WT+ S L L F ++ + FP L L+ F R+F F Y E G
Sbjct: 4 MGQLWTNTGSALATLMFVYTIFKQFFP--LFGPQLEPFLYRLFGRFYPYIQITFHEYSGE 61
Query: 60 N--TNELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEH 117
+ +E Y +Q S +I + + + I D F G+ V W+
Sbjct: 62 HFKRSEAYLGIQSYLSKDSSARAKKLKANTTKGSKSIVLSMDDKEEITDDFEGIRVWWQS 121
Query: 118 VVSPRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYT 177
Q+FS+ P EKR + LR ++D+ +I++ YL+ +M + I +KN++R LY+
Sbjct: 122 KKEGATRQSFSFYPEANEKRYYMLRFHRRDREVIIERYLEHVMREGKTIEQKNRERKLYS 181
Query: 178 NSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWK 237
N+ G S W V+F+HP+TFDTLA++ KK EI DL F+ +Y+K G+AWK
Sbjct: 182 NTPGQS-HGNNSKWSHVTFEHPATFDTLAMEENKKEEIKSDLIKFSKSKDYYKKIGKAWK 240
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDI 297
RGYLL+GPPGTGKS+MIAAMAN+L YD+YDLELT V +N+ LR+LL++TS+KSIIVIEDI
Sbjct: 241 RGYLLFGPPGTGKSTMIAAMANFLEYDVYDLELTTVKDNTHLRRLLIETSAKSIIVIEDI 300
Query: 298 DCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGL 357
DCS+ E +M + GE+ + +TLSGLLNF DGL
Sbjct: 301 DCSLNLTGQRKKKEEEEEDGDDKNTI--EKKMMMKNE---GENKESKVTLSGLLNFIDGL 355
Query: 358 WSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYXXXXXX 417
WS CG E+I VFTTN ++KLDPAL+R GRMD HI MSYC + A +L KNYL
Sbjct: 356 WSACGGERIIVFTTNFVDKLDPALIRKGRMDKHIEMSYCCFEAFKVLAKNYLDVEESEMF 415
Query: 418 XXXXXXXXXVVGKAEMTPADISEVLI-KNKRDKCKA-VRELLETLKVKAEKNVKHGGIIV 475
V + +MTPAD+ E L+ K++++ + ++ L+E LK + E+ K
Sbjct: 416 EEIKRLLE--VEEIKMTPADVGENLLPKSEKEGGETCLKRLIEALKEEKEEAKK------ 467
Query: 476 KNSDYEEEEQEKRALESPIEGSDIEDANNCEE 507
K + EEE+Q K+ IE ++ E EE
Sbjct: 468 KVEEEEEEKQRKKEKVKEIE-AEKEKKKKIEE 498
>TAIR|locus:2178067 [details] [associations]
symbol:AATP1 "AAA-ATPase 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0010154
"fruit development" evidence=IMP] [GO:0010431 "seed maturation"
evidence=IMP] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005783 GO:GO:0005739 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0010431 EMBL:AB010077 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00538441
RefSeq:NP_198817.1 UniGene:At.65609 ProteinModelPortal:Q9FLD5
SMR:Q9FLD5 PRIDE:Q9FLD5 EnsemblPlants:AT5G40010.1 GeneID:833998
KEGG:ath:AT5G40010 TAIR:At5g40010 InParanoid:Q9FLD5 OMA:HEEITDE
PhylomeDB:Q9FLD5 ProtClustDB:CLSN2685235 Genevestigator:Q9FLD5
Uniprot:Q9FLD5
Length = 514
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 191/512 (37%), Positives = 275/512 (53%)
Query: 1 MREYWTSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEIDG-- 58
M E WT+ S L L F ++ + FP LR L + Y E G
Sbjct: 4 MGEVWTNTGSALASLVFIYTIFERFFPYRLREHFEPLAQSLIGFIYPYIQITFHEYSGER 63
Query: 59 VNTNELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHV 118
+++Y+A+Q + +I + +++ I D F GV V W+
Sbjct: 64 FKRSDVYDAIQSYLSKDSSSRAKKLTANTIKGNKSIILSMDDHEEITDEFQGVKVWWQSK 123
Query: 119 VSPRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTN 178
+++ S+ P +E R + L+ ++D+ +I YL+ ++ + I KN++R LY+N
Sbjct: 124 KHQSESRAISFYPKADESRFYMLKFHRRDREVITKKYLNHVISEGKTIEVKNRERKLYSN 183
Query: 179 SRGGSLDS-RGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWK 237
+ + + W V+F+HP+TFDTLA++ +KK EI DL F+N +Y+K G+AWK
Sbjct: 184 NPSQNWSGYKQTKWSHVTFEHPATFDTLAMEYKKKEEIKNDLIKFSNSKDYYKKIGKAWK 243
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDI 297
RGYLL+GPPGTGKS+MIAAMAN L YD+YDLELT V +N+ELR+LL++TS KSIIVIEDI
Sbjct: 244 RGYLLFGPPGTGKSTMIAAMANLLEYDVYDLELTTVKDNTELRRLLIETSGKSIIVIEDI 303
Query: 298 DCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGL 357
DCS+ E +M+ G E+ + +TLSGLLNF DGL
Sbjct: 304 DCSLDLTGQRKQKKDEEEDEDETSPI--EKQMKKDQG----ENKGSKVTLSGLLNFIDGL 357
Query: 358 WSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYXXXXXX 417
WS CG E+I VFTTN I+KLDPAL+R GRMD HI MSYC + A +L NYL
Sbjct: 358 WSACGGERIIVFTTNFIDKLDPALIRKGRMDKHIEMSYCGFEAFKVLANNYLDAKEEDDN 417
Query: 418 XXXXXXXXXV-VGKAEMTPADISEVLIKNKRDKCKAV--RELLETLKVKAEKNVKHGGII 474
+ V + +MTPAD+ E L+K + K + + L+E LK + E+ +
Sbjct: 418 ELFDEIKRLLEVEEIKMTPADVGENLLKKSEVETKEICLKRLIEALKEEKEEAKRRIEDE 477
Query: 475 VKNSDYEEEEQEKRALESPIEGSDIEDANNCE 506
K EEE + K+ E I+ + E+ E
Sbjct: 478 EKKKKEEEEIKRKKREEKKIKKEEKEEKEENE 509
>TAIR|locus:2098658 [details] [associations]
symbol:AT3G28510 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0005783 "endoplasmic
reticulum" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005783 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2685225 EMBL:AY099692
IPI:IPI00532130 RefSeq:NP_189492.1 UniGene:At.42784
ProteinModelPortal:Q9LH84 SMR:Q9LH84 PaxDb:Q9LH84
EnsemblPlants:AT3G28510.1 GeneID:822481 KEGG:ath:AT3G28510
TAIR:At3g28510 InParanoid:Q9LH84 OMA:YLEIETH PhylomeDB:Q9LH84
ArrayExpress:Q9LH84 Genevestigator:Q9LH84 Uniprot:Q9LH84
Length = 530
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 185/518 (35%), Positives = 278/518 (53%)
Query: 5 WTSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEI--DGVNTN 62
W + + F ++ + P R + F+++ S Y TE +G+ +
Sbjct: 8 WGITGTTVTSFMFFWAIYKQYVPAHFRAYVERYFHKMIGWISYYVDIKFTEYTDEGLKRS 67
Query: 63 ELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVSPR 122
+ Y++++ NS ++ F + +++ I D F GV V W V
Sbjct: 68 QAYDSIRNYLASKSTALAKRLKANETKNSKSLVFSMDDHEEIEDEFEGVKVKWYSNVKVI 127
Query: 123 QTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSRGG 182
Q Q+ + EE+R FTL ++ + +I+++YLD ++ + I N++R LYTN+
Sbjct: 128 QPQSNYGQRSSEERRHFTLSFHRRHRGMIIETYLDHVLREGKAIGLMNRERKLYTNNSSQ 187
Query: 183 S-LDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYL 241
R W +V F HP+TF+TLA+DPEKK I +DL F+ G +Y+K G+ WKRGYL
Sbjct: 188 EWYPWRSGKWSNVPFHHPATFETLAMDPEKKEGIKKDLIKFSKGKDYYKKVGKPWKRGYL 247
Query: 242 LYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSI 301
L+GPPGTGKS+MIAA+AN+L YD+YDLELT V +NSEL+KLL+ T+SKSIIVIEDIDCS+
Sbjct: 248 LFGPPGTGKSTMIAAIANFLDYDVYDLELTTVKDNSELKKLLLDTTSKSIIVIEDIDCSL 307
Query: 302 XXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCC 361
E + G +D + +TLSGLLN DGLWS C
Sbjct: 308 DLTGQRKKKKEEDEEEDGE-------EKKEGEKKPKVDDKQSKVTLSGLLNSIDGLWSAC 360
Query: 362 GSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYXXXXXXXXXX 421
EKI VFTTN ++KLDPAL+R GRMD HI MSYC + A +L KNYL
Sbjct: 361 SGEKIIVFTTNFVDKLDPALIRRGRMDNHIEMSYCKFEAFKVLAKNYLEIETHDLYGEIE 420
Query: 422 XXXXXVVGKAEMTPADISEVLI--KNKRDKCKAVRELLETLKVKAEKNVKHGGIIVKNSD 479
+ + +M+PAD++E L+ ++ D ++ L++TL+ + EK K + + +
Sbjct: 421 RK----LEETDMSPADVAETLMPKSDEEDADICIKRLVKTLEEEKEKARK----LAEEEE 472
Query: 480 YEEEEQEKRALESPIEGSDIEDANNCEEGDDDHEEKIK 517
++ E+E + ++ E E EE + + K K
Sbjct: 473 KKKAEKEAKKMKKAEEAE--EKKKKTEEDEKKEKVKAK 508
>TAIR|locus:2178057 [details] [associations]
symbol:AT5G40000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00516295 RefSeq:NP_198816.1 UniGene:At.51146
ProteinModelPortal:F4KFX5 SMR:F4KFX5 EnsemblPlants:AT5G40000.1
GeneID:833997 KEGG:ath:AT5G40000 OMA:ISAMANY Uniprot:F4KFX5
Length = 470
Score = 528 (190.9 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 124/315 (39%), Positives = 175/315 (55%)
Query: 1 MREYWTSLASLLGVLAFCQSLLQVIFPPELR----------FASLKLFNRI---F-NIFS 46
M + + S+ S + L F + +Q IFP L+ F L R+ F N+FS
Sbjct: 4 MGDSFGSIGSSMASLFFLWATIQQIFPDHLKITIKEFLLSSFQQLCFAQRVSDHFTNLFS 63
Query: 47 SYCYFDITEIDGVNTNELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDS-IY 105
Y E D + N+ ++A+ ++ S + L N++ +
Sbjct: 64 PYVEIHFPESDEYSFNQAFSAIDTYLDSKATDKTKHLRGSQVKESKGLV--LKRNEAKVR 121
Query: 106 DSFNGVGVLWEHVVSPRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKAND 165
D + G V WE VV + R + L + ++LI +SY+ +++E+
Sbjct: 122 DEYKGANVWWERVVDN------------DGNRYYKLTFHNRARTLITNSYIKYVVEEGKS 169
Query: 166 IRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANG 225
I KN+ L+TN+ + W S+ F+HP++F TLA+DP+KK EI+ DL F+NG
Sbjct: 170 IIVKNKQTRLFTNNLSTQWVFGQNMWRSIEFEHPASFQTLAMDPKKKEEIVNDLIAFSNG 229
Query: 226 MSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMK 285
+Y+K G+AWKRGYLLYGPPGTGKS+MI+AMAN L Y+IYDLELT V NNSEL+KLL
Sbjct: 230 KEYYKKIGKAWKRGYLLYGPPGTGKSTMISAMANLLNYNIYDLELTAVKNNSELKKLLTA 289
Query: 286 TSSKSIIVIEDIDCS 300
TSSKSIIVIEDIDCS
Sbjct: 290 TSSKSIIVIEDIDCS 304
Score = 300 (110.7 bits), Expect = 1.4e-80, Sum P(2) = 1.4e-80
Identities = 63/128 (49%), Positives = 87/128 (67%)
Query: 337 GGEDGN-NSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSY 395
G ED + NS+TLSGLLNF DG+WS CG E+I VFTTNH+EKLDPAL+R GRMDMHI +SY
Sbjct: 323 GKEDKDENSVTLSGLLNFIDGIWSACGQERIVVFTTNHLEKLDPALIRRGRMDMHIELSY 382
Query: 396 CSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLI-KNKR-DKCKAV 453
C+Y A IL KNYL ++ + +++PAD++E L+ +N++ D K++
Sbjct: 383 CTYEAFKILAKNYLDLDGDDAHPLFSEIKA-LLEETKISPADVAENLMARNQQIDVDKSL 441
Query: 454 RELLETLK 461
L+ L+
Sbjct: 442 NLLISALE 449
>TAIR|locus:2078007 [details] [associations]
symbol:AT3G50940 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR eggNOG:COG0465
GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363 EMBL:BT026134
IPI:IPI00532009 RefSeq:NP_190663.2 UniGene:At.35440
ProteinModelPortal:Q147F9 SMR:Q147F9 PaxDb:Q147F9 PRIDE:Q147F9
EnsemblPlants:AT3G50940.1 GeneID:824258 KEGG:ath:AT3G50940
TAIR:At3g50940 HOGENOM:HOG000237995 InParanoid:Q147F9 OMA:DCSIELK
PhylomeDB:Q147F9 ProtClustDB:CLSN2680378 Genevestigator:Q147F9
Uniprot:Q147F9
Length = 451
Score = 536 (193.7 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 117/302 (38%), Positives = 174/302 (57%)
Query: 6 TSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEIDGVNTNELY 65
T++AS+ +S++Q P E+ F R F+ FS I E G N+++
Sbjct: 17 TAVASVAAAAILARSVVQDYMPNEVHEYISHGFRRFFSYFSYQMTAVIEEFGGFEHNQVF 76
Query: 66 NAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLW----EHVVSP 121
A + + S + + ++ + D F+GV + W HV
Sbjct: 77 EAAEAYLSTKISNSTRRIKVNKLEKQSNYSVTVERDEEVVDIFDGVKLSWILVCRHVDKK 136
Query: 122 --RQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNS 179
R + + L E R + L +KK K+++L+SYL F++E+A I++K + ++T
Sbjct: 137 DFRNPRDLN-STLKSEVRSYELSFRKKFKNMVLESYLPFVVEQAASIKQKFKTLKIFT-- 193
Query: 180 RGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRG 239
+DS W SV+ HPSTF TLA+DPE K ++EDL F FY + G+AWKRG
Sbjct: 194 ----VDSYSVEWTSVTLDHPSTFRTLALDPEVKKNLVEDLDRFVQRKGFYGRVGKAWKRG 249
Query: 240 YLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDC 299
YLLYGPPGTGKSS+IAA+AN+L +DIYDL+LT ++NN+ELR+LLM T+++SI+V+EDIDC
Sbjct: 250 YLLYGPPGTGKSSLIAAIANHLNFDIYDLDLTSLNNNAELRRLLMSTANRSILVVEDIDC 309
Query: 300 SI 301
SI
Sbjct: 310 SI 311
Score = 278 (102.9 bits), Expect = 4.1e-79, Sum P(2) = 4.1e-79
Identities = 59/124 (47%), Positives = 80/124 (64%)
Query: 342 NNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPAL 401
+ ++TLSGLLNF DGLWS CG+E+I VFTTN+ EKLDPALLR GRMDMHI MSYC+ A
Sbjct: 327 HKTVTLSGLLNFVDGLWSSCGNERIIVFTTNYREKLDPALLRPGRMDMHIHMSYCTPAAF 386
Query: 402 LILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETLK 461
+L NYL + + E+TPA+++E L+++ K ++ L+E LK
Sbjct: 387 KVLASNYL----EIQDHILFEQIEEFIREIEVTPAEVAEQLMRSDSVD-KVLQGLVEFLK 441
Query: 462 VKAE 465
K +
Sbjct: 442 AKKQ 445
>TAIR|locus:2077997 [details] [associations]
symbol:BCS1 "cytochrome BC1 synthesis" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0009611 "response to wounding" evidence=RCA] [GO:0009612
"response to mechanical stimulus" evidence=RCA] [GO:0009627
"systemic acquired resistance" evidence=RCA] [GO:0009697 "salicylic
acid biosynthetic process" evidence=RCA] [GO:0010200 "response to
chitin" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 EMBL:CP002686 GO:GO:0017111
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2680378 EMBL:AY064981 EMBL:BT002611 IPI:IPI00548437
RefSeq:NP_190662.2 UniGene:At.23776 ProteinModelPortal:Q8VZG2
SMR:Q8VZG2 STRING:Q8VZG2 PRIDE:Q8VZG2 EnsemblPlants:AT3G50930.1
GeneID:824257 KEGG:ath:AT3G50930 TAIR:At3g50930 InParanoid:Q8VZG2
OMA:QLMRSDE PhylomeDB:Q8VZG2 Genevestigator:Q8VZG2 Uniprot:Q8VZG2
Length = 576
Score = 539 (194.8 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 118/305 (38%), Positives = 171/305 (56%)
Query: 6 TSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEIDGVNTNELY 65
T+ AS+ +SL+Q P E+ F IF FSS I E +G NE++
Sbjct: 63 TTAASVAATAMLARSLVQDYLPDEVHHYISYGFRSIFGYFSSQMTIIIEEFEGFAHNEVF 122
Query: 66 NAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLW----EHVVS- 120
A + ++ + + ++ + D++NGV W HV S
Sbjct: 123 EAAEAYLATKISPSNKRIKVSKHEKENNYNVTVERDEEVVDTYNGVKFQWILHCRHVESK 182
Query: 121 ----PRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLY 176
PR + L E R F L KK K + L+SYL F++++A ++++ + ++
Sbjct: 183 HFHNPRDLNS----TLRSEVRSFELNFHKKFKDVALESYLPFMVKRATLMKQEKKTLKIF 238
Query: 177 TNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAW 236
T S + W SV+ HPSTF TLA+D + K +MEDL F FY++ G+AW
Sbjct: 239 TLSPENMYGNYSDAWTSVTLDHPSTFKTLAMDSDVKTSVMEDLDKFVKRRDFYKRVGKAW 298
Query: 237 KRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIED 296
KRGYLLYGPPGTGKSS+IAAMAN+L +DIYDLELT V+NNSELR+LL+ T+++SI+++ED
Sbjct: 299 KRGYLLYGPPGTGKSSLIAAMANHLNFDIYDLELTAVNNNSELRRLLIATANRSILIVED 358
Query: 297 IDCSI 301
IDCS+
Sbjct: 359 IDCSL 363
Score = 272 (100.8 bits), Expect = 8.4e-79, Sum P(2) = 8.4e-79
Identities = 65/152 (42%), Positives = 87/152 (57%)
Query: 345 ITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLIL 404
+TLSGLLNF DGLWS CG E+I +FTTN+ EKLD ALLR GRMDMHI MSYC+ L
Sbjct: 388 VTLSGLLNFIDGLWSSCGDERIIIFTTNYKEKLDAALLRPGRMDMHIHMSYCTPSTFKAL 447
Query: 405 LKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRE-LLETLKVK 463
NYL + E+TPA+++E L++N D V E L+E LKVK
Sbjct: 448 ALNYLEIKEHRLFSKIEEG----IEATEVTPAEVAEQLMRN--DSVDKVLEGLIEFLKVK 501
Query: 464 AEKNVKHGGIIVKNSDYEEEEQEKRALESPIE 495
+N + K + E +++ K +S ++
Sbjct: 502 KIENEQDKAKTEKQ-ELENKKKTKEGTDSVVK 532
Score = 49 (22.3 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 455 ELLETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRALESPIEGSDIED 501
EL L A +++ +IV++ D E +++ + E P E DIED
Sbjct: 340 ELRRLLIATANRSI----LIVEDIDCSLELKDRTSDEPPRESDDIED 382
>TAIR|locus:2098648 [details] [associations]
symbol:AT3G28540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0017111
EMBL:AP002059 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00530975 RefSeq:NP_189495.1 UniGene:At.42777
ProteinModelPortal:Q9LH82 SMR:Q9LH82 PRIDE:Q9LH82
EnsemblPlants:AT3G28540.1 GeneID:822484 KEGG:ath:AT3G28540
TAIR:At3g28540 InParanoid:Q9LH82 OMA:IITEAYL PhylomeDB:Q9LH82
ProtClustDB:CLSN2685225 ArrayExpress:Q9LH82 Genevestigator:Q9LH82
Uniprot:Q9LH82
Length = 510
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 186/517 (35%), Positives = 280/517 (54%)
Query: 6 TSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEID---GVNTN 62
T++ASL+ F S+ + P ++R K F ++F + S+ + TE G+ +
Sbjct: 13 TTMASLM----FFWSVYRQFVPYQIRDYLEKCFYKMFGLVSNSVHIKFTEYTEDKGLKKS 68
Query: 63 ELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVSPR 122
+ Y+ ++ + NS ++ L N++++ D F GV V+W V
Sbjct: 69 QAYDLIRNYLSSKSTARAQRLKANESKNSKSLVLSLDNHEAVEDVFQGVKVVWSLSVWKS 128
Query: 123 QTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSRGG 182
Q S EKR TL + + +I +YLD ++ + +I KN++R LYTN+
Sbjct: 129 NDQADS-----SEKRYLTLSFHNRYREMITTTYLDHVLREGKEIGLKNRERKLYTNNSSQ 183
Query: 183 SLDS-RGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYL 241
+ R W +V F HP+TF+TLA+D EKK + +DL F G +Y+K G+ WKRGYL
Sbjct: 184 DYSAWREGRWSNVPFDHPATFETLAMDLEKKEGMKKDLIKFTKGKDYYRKVGKPWKRGYL 243
Query: 242 LYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSI 301
L+GPPGTGKS+MI+AMAN+L YD+YDLELT V +NSEL+KL++ T KSI+VIEDIDCS+
Sbjct: 244 LFGPPGTGKSTMISAMANFLEYDVYDLELTTVKDNSELKKLMLDTKGKSIVVIEDIDCSL 303
Query: 302 XXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGN--NSITLSGLLNFTDGLWS 359
E + + + E G + +TLSGLLN DGLWS
Sbjct: 304 DLTGQRKKKKEEDEDEEE------EEKKKEAEKLLKRERGERESKVTLSGLLNAIDGLWS 357
Query: 360 CCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYXXXXXXXX 419
C EKI VFTTN+++KLDPAL+R GRMD HI MSYC + A +L KNYL
Sbjct: 358 ACSGEKIIVFTTNYLDKLDPALIRRGRMDNHIEMSYCRFEAFKVLAKNYL----EIESHD 413
Query: 420 XXXXXXXVVGKAEMTPADISEVLI-KNKRDKCK-AVRELLETLKVKAEKNVKHGGIIVKN 477
+V + +M+PAD++E L+ K+ D + L+++L+ + EK K + +
Sbjct: 414 LFGEIKRLVEETDMSPADVAENLMPKSDEDDADICLTRLVKSLEEEKEKAKK----LAEE 469
Query: 478 SDYEEEEQEKRALESPIEGSDIEDANNCEE-GDDDHE 513
++ ++ R ++ E + + N EE GD H+
Sbjct: 470 EKMKKAARDARRIKKKAE-EEHKKKNKVEENGDVSHD 505
>TAIR|locus:1005716649 [details] [associations]
symbol:AT2G18193 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 EMBL:BT026385 EMBL:AK118992
EMBL:AK175187 EMBL:AK175325 EMBL:AK176580 IPI:IPI00520678
RefSeq:NP_849972.1 UniGene:At.40029 ProteinModelPortal:Q8GW96
SMR:Q8GW96 PRIDE:Q8GW96 EnsemblPlants:AT2G18193.1 GeneID:816333
KEGG:ath:AT2G18193 TAIR:At2g18193 InParanoid:Q8GW96 OMA:IRSMANE
PhylomeDB:Q8GW96 ProtClustDB:CLSN2690765 Genevestigator:Q8GW96
Uniprot:Q8GW96
Length = 495
Score = 509 (184.2 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 110/299 (36%), Positives = 171/299 (57%)
Query: 5 WTSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEIDGVNTNEL 64
+++ ASL G L +S+L P +LR L +R F S Y I E G+N N++
Sbjct: 15 FSAYASLTGFLMLFRSMLHDFVPEKLRSYFSSLLDRFFTPKSKYLTVIIDENFGLNRNQV 74
Query: 65 YNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVSPRQT 124
++A + + T + + I D+F V W +V S +
Sbjct: 75 FDAAEMYLRSKIGPETERLRVGKIPKQKHFTISIERGEEILDTFEESEVKWSYVQSENEK 134
Query: 125 QTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSRGGSL 184
+ KR + L +KK + +L+SYL ++ ++ +I+R + LY+ S
Sbjct: 135 GD-------KVKRYYELTFEKKLRDKVLNSYLTHVVAESEEIKRNLRVVKLYSRDVYASD 187
Query: 185 DSRGHP---WESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYL 241
D G W ++ +HPSTFDTLA+DP K +I++DL+ F FY++ G+AWKRGYL
Sbjct: 188 DDDGMAGGNWGCINLEHPSTFDTLAMDPNAKKKIIDDLERFLKRKEFYKRVGKAWKRGYL 247
Query: 242 LYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCS 300
LYGPPGTGKSS+IAAMANYL +D++DLEL+ +++N EL+++L+ T+++SI+VIEDIDC+
Sbjct: 248 LYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYDNGELKRVLLSTTNRSILVIEDIDCN 306
Score = 262 (97.3 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 61/147 (41%), Positives = 81/147 (55%)
Query: 339 EDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSY 398
E +TLSG+LNF DGLWS G E+I VFTTNH E+LDPALLR GRMD+HI MSYC+
Sbjct: 320 EQIKGKVTLSGILNFIDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDVHINMSYCTG 379
Query: 399 PALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKC--KAVREL 456
L+ NYLG +V E+TPA+++E L+++ + V
Sbjct: 380 LGFRTLVSNYLGLDGLNHPLCEEIEA--LVDSTEVTPAELAEELMQDDDTDVVLRGVISF 437
Query: 457 LETLKVKAEKNVKHGGIIVKNSDYEEE 483
+E KV+ K K I D E++
Sbjct: 438 VEKRKVERSKTKKEVSICKATDDDEKQ 464
>TAIR|locus:2175986 [details] [associations]
symbol:AT5G17760 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM;IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 EMBL:CP002688 HSSP:Q01853 GO:GO:0017111
EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
IPI:IPI00548078 RefSeq:NP_850841.1 UniGene:At.23914
ProteinModelPortal:Q9FN75 SMR:Q9FN75 PRIDE:Q9FN75
EnsemblPlants:AT5G17760.1 GeneID:831644 KEGG:ath:AT5G17760
TAIR:At5g17760 InParanoid:Q9FN75 OMA:KQHDVQL PhylomeDB:Q9FN75
ProtClustDB:CLSN2686349 Genevestigator:Q9FN75 Uniprot:Q9FN75
Length = 505
Score = 463 (168.0 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 114/313 (36%), Positives = 173/313 (55%)
Query: 5 WTSLASLLGVLAFCQSLLQVIFPPELR-FASLKLFNRIFNIFSSYCYFDITEID-GVNTN 62
+T+ AS+ G + +S+ + P L+ F L + F SS I + + G+N N
Sbjct: 14 FTAYASMAGYMMMIRSMAHELIPAPLQDFIYRTLRSLFFRSSSSTLTLTIDDDNMGMN-N 72
Query: 63 ELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVSPR 122
E+Y A Q ++ + LS+ + + D + V ++W V
Sbjct: 73 EIYRAAQTYLSTKISPDAVRLRISKGHKDKHVNLYLSDGEIVNDVYEDVQLVWRFVTDGG 132
Query: 123 QTQT----FSWRPLPEEKRG----------FTLRIKKKDKSLILDSYLDFIMEKANDIRR 168
+ R +RG F L KK K LIL+SY+ +I KA +IR
Sbjct: 133 DKKGGGGGVGGRGGGGGRRGGMDDDGKSEYFELSFDKKHKDLILNSYVPYIESKAKEIR- 191
Query: 169 KNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSF 228
++ R+L +S L+S WESV +HPSTF+T+A++ + K +++EDL F F
Sbjct: 192 -DERRILMLHS----LNSLR--WESVILEHPSTFETMAMEDDLKRDVIEDLDRFIRRKEF 244
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSS 288
Y++ G+AWKRGYLLYGPPGTGKSS++AAMANYL +D+YDL+L V +S+LR+LL+ T +
Sbjct: 245 YKRVGKAWKRGYLLYGPPGTGKSSLVAAMANYLKFDVYDLQLASVMRDSDLRRLLLATRN 304
Query: 289 KSIIVIEDIDCSI 301
+SI+VIEDIDC++
Sbjct: 305 RSILVIEDIDCAV 317
Score = 308 (113.5 bits), Expect = 1.4e-74, Sum P(2) = 1.4e-74
Identities = 68/164 (41%), Positives = 94/164 (57%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFM 393
G GE +TLSGLLNF DGLWS CG E+I +FTTNH ++LDPALLR GRMDMHI+M
Sbjct: 329 GKNRGES-QGPLTLSGLLNFIDGLWSSCGDERIIIFTTNHKDRLDPALLRPGRMDMHIYM 387
Query: 394 SYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAV 453
+CS+ L NYLG ++ MTPA ++E L+K++ D A+
Sbjct: 388 GHCSFQGFKTLASNYLGLSDAAMPHRLFPEIERLIDGEVMTPAQVAEELMKSE-DADVAL 446
Query: 454 RELLETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRALESPIEGS 497
L+ L+ K+ + +++K + E +E R L+S EGS
Sbjct: 447 EGLVNVLEKMRLKSKESNPVMMKQKESRLEMEEMR-LKSDTEGS 489
>TAIR|locus:2053109 [details] [associations]
symbol:AT2G18190 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 InterPro:IPR025753
Pfam:PF14363 IPI:IPI01020552 RefSeq:NP_179411.2 UniGene:At.66217
ProteinModelPortal:F4IQG2 SMR:F4IQG2 EnsemblPlants:AT2G18190.1
GeneID:816332 KEGG:ath:AT2G18190 OMA:TRINTDM ArrayExpress:F4IQG2
Uniprot:F4IQG2
Length = 494
Score = 496 (179.7 bits), Expect = 3.2e-73, Sum P(2) = 3.2e-73
Identities = 107/299 (35%), Positives = 166/299 (55%)
Query: 5 WTSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITEIDGVNTNEL 64
+T+ ASL G L +SL P LR L NR F S I EI G N++
Sbjct: 16 FTAYASLTGFLMLFRSLFNDEVPERLRSYITDLLNRFFTPKSKNLTMVIDEIIGFKRNQV 75
Query: 65 YNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVSPRQT 124
++A + + T + + I D+F + W +V S +
Sbjct: 76 FDAAEVYLRNKIGPETARLRVGKLPKQKHFTIYIEKGEEILDTFENSELRWTYVESENEA 135
Query: 125 QTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSRGGSL 184
+EKR + L +KK + +++SYL ++ ++ + +R + LY+ S
Sbjct: 136 SQ-------KEKRYYELTFEKKLRDKVMNSYLSHVVAESEETKRDLRAVKLYSRDVRASK 188
Query: 185 DSRGHP---WESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYL 241
D G W ++ +HPSTF+TLA+DP K +I++D++ F FY++ G+AWKRGYL
Sbjct: 189 DDDGMAGAGWGCINLEHPSTFETLAMDPGAKKKIIDDMERFLKRREFYKRVGKAWKRGYL 248
Query: 242 LYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCS 300
LYGPPGTGKSS+IAAMANYL +D++DLEL+ ++ N++L+ +L+ T+++SI+VIEDIDCS
Sbjct: 249 LYGPPGTGKSSLIAAMANYLKFDVFDLELSSIYENAQLKSILLSTTNRSILVIEDIDCS 307
Score = 262 (97.3 bits), Expect = 3.2e-73, Sum P(2) = 3.2e-73
Identities = 62/148 (41%), Positives = 85/148 (57%)
Query: 339 EDGN-NSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCS 397
E+G +TLSGLLNF DGLWS G E+I VFTTNH E+LDPALLR GRMDMHI MSYC+
Sbjct: 323 EEGYYGRVTLSGLLNFVDGLWSSFGDERIIVFTTNHKERLDPALLRPGRMDMHINMSYCT 382
Query: 398 YPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIK-NKRDKC-KAVRE 455
L+ NYLG ++ E+TPA+++E L++ + D + V
Sbjct: 383 GLGFRTLVSNYLGLGGLNHPLCEEIEA--LIDSTEVTPAELAEELMQEDDTDVVLRGVVS 440
Query: 456 LLETLKVKAEKNVKHGGIIVKNSDYEEE 483
+E KV+ K + G + D +++
Sbjct: 441 FVENRKVEISKTKELEGSTCRKLDGDDK 468
>TAIR|locus:2095532 [details] [associations]
symbol:AT3G28600 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00518678 RefSeq:NP_189501.2 UniGene:At.42766
ProteinModelPortal:F4J0C0 SMR:F4J0C0 DNASU:822490
EnsemblPlants:AT3G28600.1 GeneID:822490 KEGG:ath:AT3G28600
OMA:TISHRVA ArrayExpress:F4J0C0 Uniprot:F4J0C0
Length = 477
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 167/419 (39%), Positives = 227/419 (54%)
Query: 7 SLASLLGVLAFCQSLLQVIFPPELRFASLKLF---------------NRIFNIFSSYCYF 51
+ S L L F + +Q IFP LR A +K F +R N FS Y
Sbjct: 6 TFGSSLASLFFLWATIQQIFPNHLRIA-IKEFLISTIQQLSFVQRFSDRFINFFSPYVEI 64
Query: 52 DITEIDGVNTNELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGV 111
++ + N + A++ ++ S + + + D + G
Sbjct: 65 SFSQYEDYQFNHAFAAIETYLGAKATDKAKHLRASQVKESKGLVLK-RDETKVRDEYEGG 123
Query: 112 GVLWEHVVSPRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQ 171
V WE +T + +R F L ++ + ++ DSY+ ++ E+ I+ K++
Sbjct: 124 TVWWE-----METDSTGYRT-------FKLTFHRRSRDIVTDSYIKYVFEEGKSIQAKSK 171
Query: 172 DRLLYTNSRGGSLD-SRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQ 230
L+TN+ S+ W + F+HP++F TLA+D +KK EI+ DL F+NG +Y+
Sbjct: 172 QMKLFTNNPSSHWGTSKKSFWRYIDFEHPASFHTLAMDTKKKEEILNDLAAFSNGKEYYK 231
Query: 231 KTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKS 290
K G+AWKRGYLL+GPPGTGKS+MIAAMAN+L Y IYDLELT + NNSELRKLL TSSKS
Sbjct: 232 KIGKAWKRGYLLHGPPGTGKSTMIAAMANHLNYSIYDLELTAIRNNSELRKLLTATSSKS 291
Query: 291 IIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGNNSITLSGL 350
IIVIEDIDCS+ G G E+ + +TLSGL
Sbjct: 292 IIVIEDIDCSLDLTGKRKKEKNLMTSRE--------------DGEQGTEEDKSFVTLSGL 337
Query: 351 LNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYL 409
LNF DG+WS CG E+I +FTTNH EKLDPAL+R GRMDMHI +SYCS+ A IL KNYL
Sbjct: 338 LNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIELSYCSFEAFKILAKNYL 396
Score = 300 (110.7 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 64/148 (43%), Positives = 91/148 (61%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFM 393
G G E+ + +TLSGLLNF DG+WS CG E+I +FTTNH EKLDPAL+R GRMDMHI +
Sbjct: 321 GEQGTEEDKSFVTLSGLLNFIDGIWSACGQERIIIFTTNHFEKLDPALIRRGRMDMHIEL 380
Query: 394 SYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKR--DKCK 451
SYCS+ A IL KNYL ++ + ++ PAD++E L+K D
Sbjct: 381 SYCSFEAFKILAKNYLDLDTHPLFKKIES----LLKETKIAPADVAENLMKKNTEIDADG 436
Query: 452 AVRELLETLKVKAEKNVKHGGIIVKNSD 479
++++L++ L+ K K + HG + + D
Sbjct: 437 SLKDLIQALEGK--KKI-HGAQVDEPKD 461
>TAIR|locus:2095537 [details] [associations]
symbol:AT3G28610 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042991 "transcription factor import into nucleus"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AP000420 InterPro:IPR025753
Pfam:PF14363 HOGENOM:HOG000237995 IPI:IPI00535388
RefSeq:NP_189502.2 UniGene:At.50994 ProteinModelPortal:Q9LJJ5
SMR:Q9LJJ5 DNASU:822491 EnsemblPlants:AT3G28610.1 GeneID:822491
KEGG:ath:AT3G28610 TAIR:At3g28610 InParanoid:Q9LJJ5 OMA:KETNIAP
PhylomeDB:Q9LJJ5 ProtClustDB:CLSN2685234 Genevestigator:Q9LJJ5
Uniprot:Q9LJJ5
Length = 474
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 165/423 (39%), Positives = 231/423 (54%)
Query: 4 YWTSLASLLGVLAFCQSLLQVIFPPELRFASLKLF--------------NRIFNIFSSYC 49
+ +SLASL F + +Q IFP L+ A + F ++ N FS Y
Sbjct: 6 FGSSLASLF----FLWATIQQIFPNHLKIAIKEFFLSTIQQISFAKRFSDKFINFFSPYV 61
Query: 50 YFDITEIDGVNTNELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFN 109
+ +E + N ++ ++ ++ S + + + D +
Sbjct: 62 QINFSEYEDYRVNHAFDPIETYLGAKATDKAKHLRASQVRESKGLVLK-RDETKVRDEYE 120
Query: 110 GVGVLWEHVVSPRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRK 169
G+ V WE +T + ++ L L ++ + ++ +SY+ +++E+ I K
Sbjct: 121 GIRVWWE-----METDSAGYKTLK-------LTFHRRSRDIVTNSYIKYVVEEGKSIDAK 168
Query: 170 NQDRLLYTN---SRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGM 226
N+ L+TN S GS S+ W + F+HP+TF+TLA+DP+KK +I+ DL F NG
Sbjct: 169 NKKMKLFTNNPSSHWGS--SKTSFWRYIDFEHPATFETLAMDPKKKEQILNDLAAFNNGK 226
Query: 227 SFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKT 286
+Y+K G+AWKRGYLLYGPPGTGKS+MIAAMAN L Y IYDLELT + NNSELRK+L T
Sbjct: 227 DYYKKIGKAWKRGYLLYGPPGTGKSTMIAAMANLLNYSIYDLELTAIQNNSELRKILTAT 286
Query: 287 SSKSIIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGNNSIT 346
S+KSIIVIEDIDCS+ G E+ + +T
Sbjct: 287 SNKSIIVIEDIDCSLDLTGKRKKKESNLMIWRK-------------DGDQDNEENKSFVT 333
Query: 347 LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLK 406
LSGLLNF DG+WS CG E+I VFTTNH+ KLDPAL+R GRMDMHI +SYC++ A L K
Sbjct: 334 LSGLLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIELSYCTFEAFKTLAK 393
Query: 407 NYL 409
NYL
Sbjct: 394 NYL 396
Score = 290 (107.1 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 59/137 (43%), Positives = 84/137 (61%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFM 393
G E+ + +TLSGLLNF DG+WS CG E+I VFTTNH+ KLDPAL+R GRMDMHI +
Sbjct: 321 GDQDNEENKSFVTLSGLLNFIDGIWSACGQERIIVFTTNHLAKLDPALIRRGRMDMHIEL 380
Query: 394 SYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKR--DKCK 451
SYC++ A L KNYL ++ + + PAD++E L+K R D
Sbjct: 381 SYCTFEAFKTLAKNYLDLDSHPLFSKIES----LMKETNIAPADVAENLMKKNRETDADG 436
Query: 452 AVRELLETLKVKAEKNV 468
++ +L+E+L+ K + +
Sbjct: 437 SLNDLIESLERKKKVQI 453
>TAIR|locus:2095502 [details] [associations]
symbol:AT3G28570 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00542062 RefSeq:NP_189498.1 UniGene:At.53543
ProteinModelPortal:F4J0B7 SMR:F4J0B7 EnsemblPlants:AT3G28570.1
GeneID:822487 KEGG:ath:AT3G28570 OMA:IHAMELE Uniprot:F4J0B7
Length = 451
Score = 461 (167.3 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 111/289 (38%), Positives = 161/289 (55%)
Query: 17 FCQSLLQVIFPPELRFASLK-LFNRIFNIFSSYCYFDITEIDGVNTNELYNAVQXXXXXX 75
F + + Q++F R K L ++I FS Y Y EI+G N + AV+
Sbjct: 27 FPRQIQQLLFNAIQRIPIFKRLSDKILEFFSPYAYIRFREIEGYRYNYAFAAVKTYLGAK 86
Query: 76 XXXXXXXXXXTRALNSSAITFGLSNND-SIYDSFNGVGVLWEHVVSPRQTQTFSWRPLPE 134
+ + ++ L +D I + + GV + WE +R + +
Sbjct: 87 VNSEVKNLKGNQVKENMSLD--LKRDDVKIEEEYEGVKMWWE-----------IFRCV-K 132
Query: 135 EKRGFTLRIKKKDKSLILDSYLDFIMEKANDIR-RKNQDRLLYTN-SRGGSLDSRGHPWE 192
K+ L + + ++ SYL +++E+ I+ RK + +L N S +G W
Sbjct: 133 GKKICRLTFHRSNWDVVTGSYLRYVVEEGKSIKARKKKVMVLMNNPSLNWKTSMKGL-WT 191
Query: 193 SVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSS 252
F+HP+TFDTLA+D +KK EI DL F +G +Y + G+AWKRGYLLYGPPGTGKS+
Sbjct: 192 CTEFEHPATFDTLAMDIDKKDEIFRDLVAFRDGKEYYDRIGKAWKRGYLLYGPPGTGKST 251
Query: 253 MIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSI 301
MIAAMAN + Y+IYDLELT + NN EL+KLL+ T++KSIIVIEDIDCS+
Sbjct: 252 MIAAMANLMKYNIYDLELTSIGNNWELKKLLIATTNKSIIVIEDIDCSL 300
Score = 288 (106.4 bits), Expect = 2.9e-72, Sum P(2) = 2.9e-72
Identities = 62/142 (43%), Positives = 89/142 (62%)
Query: 337 GGEDG--NNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMS 394
G ++G +N++TLSGLLNF DG+WS CG E+I VFTTNH+ KLD AL+R GRMDMHI +S
Sbjct: 313 GDKEGKKSNAVTLSGLLNFIDGIWSACGQERILVFTTNHVGKLDQALIRRGRMDMHIELS 372
Query: 395 YCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRD-KCKAV 453
YC++ A IL KNYL ++ + ++TPAD++E ++ + D K +
Sbjct: 373 YCTFGAFKILAKNYLNIDSHHLFGEIES----LLKETKITPADVAEHMMAKEVDGSLKGL 428
Query: 454 RELLETLK----VKAEKNVKHG 471
LE +K VK E+ ++ G
Sbjct: 429 IRALERIKWSQNVKVEEQLQQG 450
>TAIR|locus:2098638 [details] [associations]
symbol:AT3G28520 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
EMBL:CP002686 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00524283 RefSeq:NP_189493.1 UniGene:At.53541
ProteinModelPortal:F4J0B1 SMR:F4J0B1 PRIDE:F4J0B1
EnsemblPlants:AT3G28520.1 GeneID:822482 KEGG:ath:AT3G28520
OMA:YLENESH ArrayExpress:F4J0B1 Uniprot:F4J0B1
Length = 478
Score = 719 (258.2 bits), Expect = 4.8e-71, P = 4.8e-71
Identities = 161/458 (35%), Positives = 251/458 (54%)
Query: 36 KLFNRIFNIFSSYCYFDITEI--DGVNTNELYNAVQXXXXXXXXXXXXXXXXTRALNSSA 93
K +++F S++ Y E +G++ + Y+ + + NS +
Sbjct: 29 KYLDKLFRRDSNFVYIRFPEYTGEGLSKSRAYDEIGNYLSSISTARAKRLKAKESENSKS 88
Query: 94 ITFGLSNNDSIYDSFNGVGVLWEHVVSPRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILD 153
+ L +++++ F GV V+W V ++ + S +E R TL + + +I +
Sbjct: 89 LVLCLDDDEAVVVVFQGVNVVWSSTVVDKEDKHNS-----KEGRYLTLTFENHHRDIITN 143
Query: 154 SYLDFIMEKANDIRRKNQDRLLYTNSRGGSLDSRGHP-WESVSFKHPSTFDTLAIDPEKK 212
+Y+D ++ + +I KN++R LYTN+ S S W +V F H ++F+TL +D +KK
Sbjct: 144 TYIDHVLREGKEIALKNRERKLYTNNDSSSYSSWWEGLWSNVPFNHHASFETLGMDLDKK 203
Query: 213 IEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTE 272
EI +DL F G +Y+K + WKRGYLL+GPPGTGKS+MI+A+AN+L YD+YDLELT
Sbjct: 204 EEIKKDLIKFTKGKDYYRKVAKPWKRGYLLFGPPGTGKSTMISAIANFLEYDVYDLELTT 263
Query: 273 VHNNSELRKLLMKTSSKSIIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCG 332
V +N+EL+KL++ T KSI+VIEDIDCS+ E E
Sbjct: 264 VKDNAELKKLMLDTKGKSIVVIEDIDCSLELTEHRKKKKEEDEDKEEKK----EAE---N 316
Query: 333 SGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIF 392
V G + +N +TLSGLLN DGLWS C EKI +FTTN ++ LDPAL+R GRMD HI
Sbjct: 317 LKRVSGNNESN-VTLSGLLNAIDGLWSACSDEKIIIFTTNFVDNLDPALIRRGRMDYHIE 375
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLI-KNKRDKCK 451
MSYC + A +L KNYL ++ + +++PAD++E L+ K+ D
Sbjct: 376 MSYCRFEAFKVLAKNYL----ENESHDLYGEIGRLLEEVDVSPADVAENLMPKSDEDDAD 431
Query: 452 -AVRELLETLKVKAEKNVKHGGIIVKNSDYEEEEQEKR 488
R L+++L+ + +K ++ K + +QEK+
Sbjct: 432 ICFRRLVKSLEEEKKKKIEKEARKNKKKAEDNVKQEKQ 469
>TAIR|locus:2175956 [details] [associations]
symbol:AT5G17740 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AB006706 InterPro:IPR025753 Pfam:PF14363
HOGENOM:HOG000237995 ProtClustDB:CLSN2686349 IPI:IPI00523930
RefSeq:NP_197276.1 UniGene:At.65521 ProteinModelPortal:Q9FN77
SMR:Q9FN77 EnsemblPlants:AT5G17740.1 GeneID:831642
KEGG:ath:AT5G17740 TAIR:At5g17740 InParanoid:Q9FN77 OMA:MINTIIP
PhylomeDB:Q9FN77 Genevestigator:Q9FN77 Uniprot:Q9FN77
Length = 533
Score = 459 (166.6 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 102/305 (33%), Positives = 166/305 (54%)
Query: 5 WTSLASLLGVLAFCQSLLQVIFPPELR---FASLKLFNRIFNIFSSYCYFDITEIDGVNT 61
+++ AS++G + + ++ I P ++ F+ LK F SS I ++ +
Sbjct: 14 FSTYASMMGYVMIIKPMINTIIPRPVQNFVFSYLKSFA---GSRSSTLTLTIDQMSSMYI 70
Query: 62 -NELYNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVV- 119
+ELY A Q R + LS+ + + D +NG+ + W +
Sbjct: 71 PDELYAAAQAYLSTKISPNSVRLIMARDPAEKKVKLYLSDGEVVSDVYNGIKLKWRFLAR 130
Query: 120 SPRQTQTFSWRPLPE---EKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLY 176
+ T + + ++ L KK + L+++SY+ ++ KA ++ K + ++
Sbjct: 131 NKNNTMVEEYGQSYQGNIQRESLELSFDKKHRDLVVNSYIPYVESKAKEVNNKRRILKMH 190
Query: 177 TNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAW 236
S W+SV+FKHPSTFDT+A++ + K ++EDL F FY++ G+AW
Sbjct: 191 CYSH------MAQTWQSVNFKHPSTFDTMAMNDDLKRSMIEDLDRFVGRKDFYKRVGKAW 244
Query: 237 KRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIED 296
KRGYLLYGPPGTGKSS++AAMANYL +DIYDL+L V ++ LR LL+ T++ SI++IED
Sbjct: 245 KRGYLLYGPPGTGKSSLVAAMANYLKFDIYDLQLASVQGDAHLRSLLLATNNSSILLIED 304
Query: 297 IDCSI 301
IDCS+
Sbjct: 305 IDCSV 309
Score = 266 (98.7 bits), Expect = 9.8e-70, Sum P(2) = 9.8e-70
Identities = 58/132 (43%), Positives = 79/132 (59%)
Query: 333 SGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIF 392
S +G + +TLSGLLN DGLWS CG+E+I +FTTN+ EKLDPALLR GRMDMHI+
Sbjct: 322 SQPLGAVQVSKPLTLSGLLNCIDGLWSSCGNERIIIFTTNNKEKLDPALLRPGRMDMHIY 381
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXX-XXXXVVGKAEMTPADISEVLIKNKRDKCK 451
M +CS+ L NYLG ++ +TPA ++E L+K++ D
Sbjct: 382 MGHCSFQGFKTLASNYLGLSDENDDTHPLCPDIKHLIDGHVLTPAQVAEELMKDE-DADA 440
Query: 452 AVRELLETLKVK 463
A+ L++ LK K
Sbjct: 441 ALEGLVKVLKRK 452
>TAIR|locus:2175946 [details] [associations]
symbol:AT5G17730 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR
eggNOG:COG0465 GO:GO:0017111 EMBL:AB006706 HSSP:Q9LCZ4
InterPro:IPR025753 Pfam:PF14363 HOGENOM:HOG000237995
ProtClustDB:CLSN2686349 IPI:IPI00546054 RefSeq:NP_197275.1
UniGene:At.54888 ProteinModelPortal:Q9FN78 SMR:Q9FN78 PRIDE:Q9FN78
EnsemblPlants:AT5G17730.1 GeneID:831641 KEGG:ath:AT5G17730
TAIR:At5g17730 InParanoid:Q9FN78 OMA:DINCTIE PhylomeDB:Q9FN78
Genevestigator:Q9FN78 Uniprot:Q9FN78
Length = 470
Score = 443 (161.0 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 99/301 (32%), Positives = 158/301 (52%)
Query: 6 TSLASLLGVLAFCQSLLQVIFPPELRFASLKLFNRIFNIFSSYCYFDITE-IDGVNTNEL 64
++ ASL G + + L++ PP L+ + N + S I + I NEL
Sbjct: 15 SAYASLTGYVMMIKPFLEMTIPPPLQNYMISYLNSFLHSTPSTLTLIIDDHIKNGMYNEL 74
Query: 65 YNAVQXXXXXXXXXXXXXXXXTRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVSPRQT 124
Y A Q +R + + S + + D + G+ V W V ++
Sbjct: 75 YGAAQVYISTKVNHNAERLRISRDRSEKNVNIHFSVGEVVSDIYQGIEVKWRFCVDSNKS 134
Query: 125 QTFSWR----PLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSR 180
+ L ++ L +KK L+L+SY+ ++ KA I + + +Y
Sbjct: 135 NMVHYFGEHFKLNPDRECVELSFEKKHTELVLNSYIPYVESKAKVINNERKILKMY---- 190
Query: 181 GGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGY 240
S W+SV+ +HPSTFDT+A++ E K +M DL F FY++ G+ WKRGY
Sbjct: 191 --SYCCMYLKWQSVNLEHPSTFDTMAMNEELKRSVMGDLDRFIRRKDFYKRVGKPWKRGY 248
Query: 241 LLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCS 300
LLYGPPGTGK+S++AA+ANYL +DIYDL+L V +++LR+LL+ T++ SI+++EDIDC+
Sbjct: 249 LLYGPPGTGKTSLVAAIANYLKFDIYDLQLASVREDADLRRLLLGTTNSSILLVEDIDCA 308
Query: 301 I 301
+
Sbjct: 309 V 309
Score = 269 (99.8 bits), Expect = 2.3e-68, Sum P(2) = 2.3e-68
Identities = 58/132 (43%), Positives = 78/132 (59%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G++ +TLSGLL DGLWS CG E+I +FTT H E+LDPALLR GRMDMHI M +C +
Sbjct: 325 GSSMLTLSGLLTCIDGLWSSCGDERIVIFTTTHKERLDPALLRPGRMDMHIHMGHCCFDV 384
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
L NYLG + G+ +TPA ++E L+KN+ D A+ L++ L
Sbjct: 385 FKTLASNYLGLSHDDPHHLYPEIERLIKGEV-LTPAQVAEELMKNE-DPDVALEGLVKVL 442
Query: 461 KVKAEKNVKHGG 472
K K + K+ G
Sbjct: 443 KRKRLELEKYDG 454
>TAIR|locus:2175976 [details] [associations]
symbol:AT5G17750 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002688 GO:GO:0017111 InterPro:IPR025753 Pfam:PF14363
IPI:IPI00522104 RefSeq:NP_197277.1 UniGene:At.54890
ProteinModelPortal:F4KID5 SMR:F4KID5 EnsemblPlants:AT5G17750.1
GeneID:831643 KEGG:ath:AT5G17750 OMA:YIAYVER Uniprot:F4KID5
Length = 392
Score = 435 (158.2 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 89/219 (40%), Positives = 133/219 (60%)
Query: 86 TRALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVSPRQTQTFSWRPLPE---EKRGFTLR 142
TR N+ + LS + + D + G+ + W ++ + T E + F L
Sbjct: 72 TRDPNNKNVNLHLSQGEVVSDVYKGIELKWRYLEGRNKKTTVVGEETEEAIVNWQCFELS 131
Query: 143 IKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTF 202
KK K L++ SY+ ++ KA I K + R++ +S S R W+SV F+HPSTF
Sbjct: 132 FDKKHKDLVVKSYIAYVERKAKVI--KEERRIIKMHSYS-SYTLR---WQSVKFEHPSTF 185
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLG 262
T+A+ P+ K +MEDL F +Y++ G+AWKR Y LYGPPGTGKSS++AAMANYL
Sbjct: 186 HTMAMTPKLKSSVMEDLDRFIKRKDYYKRVGKAWKRSYFLYGPPGTGKSSLVAAMANYLK 245
Query: 263 YDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSI 301
+DIYDL+L V +++LR LL+ T++ SI+++EDIDCS+
Sbjct: 246 FDIYDLQLANVQGDAQLRSLLLATNNSSILLVEDIDCSV 284
Score = 239 (89.2 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 44/76 (57%), Positives = 55/76 (72%)
Query: 335 SVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMS 394
++G G+ +TLSGLLN DGLWS CG E+I +FTTN+ E LDPALLR G MDMHI++
Sbjct: 296 TLGAPKGSTPLTLSGLLNCIDGLWSSCGDERIVIFTTNNKEVLDPALLRPGCMDMHIYLG 355
Query: 395 YCSYPALLILLKNYLG 410
+CS+ IL NYLG
Sbjct: 356 HCSFEGFKILASNYLG 371
>TAIR|locus:2037186 [details] [associations]
symbol:AT1G43910 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009737 "response to abscisic acid stimulus" evidence=IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004
SMART:SM00382 GO:GO:0005783 EMBL:CP002684 GO:GO:0009506
GO:GO:0005524 GO:GO:0009737 GO:GO:0005794 HSSP:Q01853 GO:GO:0017111
EMBL:AC022314 UniGene:At.28764 UniGene:At.48277 InterPro:IPR025753
Pfam:PF14363 IPI:IPI00548009 PIR:C96503 RefSeq:NP_175058.1
ProteinModelPortal:Q9LP11 SMR:Q9LP11 STRING:Q9LP11 PRIDE:Q9LP11
EnsemblPlants:AT1G43910.1 GeneID:840990 KEGG:ath:AT1G43910
InParanoid:Q9LP11 OMA:MWESTVF ProtClustDB:CLSN2679597
Genevestigator:Q9LP11 Uniprot:Q9LP11
Length = 475
Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
Identities = 168/492 (34%), Positives = 254/492 (51%)
Query: 5 WTSLASLLGVLAFCQSLLQVIFPPELR-FASLKLFNRIFNIFSSYCYFDITEIDGVNTNE 63
+TS +++ + F +++L I P +R + ++K + + F S F I + N+
Sbjct: 18 YTSFSAI--TMLF-RTILNEIVPKRIREYIAMKAVDFFSSYFQSDFTFVIEQRWEFVENQ 74
Query: 64 LYNAVQXXXXXXXXXXXXXXXXTRALN----SSAITFGLSNNDSIYDSFNGVGVLWE-HV 118
+ A + + N ++ G+ N I D+F G+ + W H
Sbjct: 75 TFRAAEVYLPTCLAGLSTGKLLVGSSNLKNPAAEPKLGIPVNTKIIDNFEGIHLEWTLHS 134
Query: 119 VSPRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTN 178
V +T+ + LPE KR F L KK+ + I+ Y ++ + A I ++ +YT
Sbjct: 135 V---ETKKY----LPE-KRYFHLTCKKEFREKIMTDYFTYLAKSAEKIMSHRENLKIYTY 186
Query: 179 SRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKR 238
++ S WES F+H +TF+TLA++P+ K +++DL F+ G F++ GRAWKR
Sbjct: 187 NQDRS------KWESAIFEHHTTFETLAVEPDLKKTLIDDLDAFSKGKDFFKSVGRAWKR 240
Query: 239 GYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDID 298
GYLLYGPPGTGKSSM+AA+AN++ Y IYDL++ V ++ ELR++L T ++SI++IEDID
Sbjct: 241 GYLLYGPPGTGKSSMVAAIANHMKYHIYDLQIQSVRDDGELREILTSTKNRSILLIEDID 300
Query: 299 CSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLW 358
C EP+ R VG I+LSGLLNF DGLW
Sbjct: 301 CGADASRRRQSKKKEEDGGEDDG----EPQKRKKKFEVG-------ISLSGLLNFVDGLW 349
Query: 359 SCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYXXXXXXX 418
S CG EKI +FTTNH EKLDPALLR GRMD+HI M C+ P + K +
Sbjct: 350 SSCGEEKIIIFTTNHKEKLDPALLRPGRMDVHILMDNCT-P---FVFKKLVALYLKTDEH 405
Query: 419 XXXXXXXXVVGKAEMTPADISEVLI--KNKRDKCKAVRELLETLKVKA--EKNVKHGGII 474
++ + TPA++++ L+ KN K + E LE K+K + +V+ G I
Sbjct: 406 VLFDPIEKLILEVSSTPAEVTQQLMASKNADIALKGLAEFLENKKLKKGEDSSVEEEGEI 465
Query: 475 VKNSDYEEEEQE 486
D E +E E
Sbjct: 466 ---EDAETKEAE 474
>TAIR|locus:2039981 [details] [associations]
symbol:AT2G46620 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009693 "ethylene biosynthetic process" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 EMBL:CP002685 GO:GO:0017111 IPI:IPI00525526
RefSeq:NP_182185.2 UniGene:At.19721 ProteinModelPortal:F4IJ77
SMR:F4IJ77 EnsemblPlants:AT2G46620.1 GeneID:819274
KEGG:ath:AT2G46620 OMA:CDDLRAL InterPro:IPR025753 Pfam:PF14363
Uniprot:F4IJ77
Length = 491
Score = 429 (156.1 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 104/302 (34%), Positives = 156/302 (51%)
Query: 5 WTSLASLLGVLAFCQSLLQVI-FPPELRFASLKLFNR-IFNIFSSYCYFDITEI-DGVNT 61
W S LL V F L++++ F L + +KL+ R I + F Y ++ + E D V
Sbjct: 5 WDSFLLLL-VSTFALFLVRILLFKTGLIYM-VKLWRRKIIDWFHVYQFYKVPEFNDNVQE 62
Query: 62 NELYNAVQXXXXXXXXXXXXXXXXT-RALNSSAITFGLSNNDSIYDSFNGVGVLWEHVVS 120
N LY V S+ I L N + D F G V W ++
Sbjct: 63 NHLYQKVYMYLNSLSSIENSDFTNLFTGKKSNEIILRLDRNQVVGDEFLGARVCW---IN 119
Query: 121 PRQTQTFSWRPLPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTN-- 178
+ R F L+I+K DK IL SYL I ++++ ++N + L+ N
Sbjct: 120 GEDE---------DGARNFVLKIRKADKRRILGSYLQHIHTVSDELEQRNTELKLFINVG 170
Query: 179 --SRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAW 236
+ W S+ F HP TFD +A++ + K ++ DL+ F G +Y + GR W
Sbjct: 171 IDDHLNKKKKKNGRWRSIPFDHPCTFDNIAMETDLKNKVKSDLESFLKGKQYYNRLGRVW 230
Query: 237 KRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIED 296
KR YLLYGP GTGKSS +AAMAN+L YD+YD++L++V ++S+L+ LL++T KS+IVIED
Sbjct: 231 KRSYLLYGPSGTGKSSFVAAMANFLDYDVYDIDLSKVVDDSDLKMLLLQTRGKSVIVIED 290
Query: 297 ID 298
+D
Sbjct: 291 LD 292
Score = 209 (78.6 bits), Expect = 1.4e-60, Sum P(2) = 1.4e-60
Identities = 45/146 (30%), Positives = 77/146 (52%)
Query: 342 NNSITLSGLLNFTDG-LWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
+ ++ LSG+LNFTD L SC E+I VFT E++DPA+LR GR+D+HI C + A
Sbjct: 299 STAVNLSGILNFTDSILSSCTADERIMVFTMTGKEQIDPAMLRPGRVDVHIHFPLCDFTA 358
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
L NYLG G A ++PA+I E++I N+ +A++ ++ L
Sbjct: 359 FKTLANNYLGVKEHKLFSQVEGIFQN--G-ASLSPAEIGELMIANRNSPTRALKHVINAL 415
Query: 461 KVKAEKNVKHGGIIVKNSDYEEEEQE 486
+ ++ ++++N + ++
Sbjct: 416 QTDGDRRGTGRRLLLENGSRKSTSED 441
>TAIR|locus:2115954 [details] [associations]
symbol:AT4G05380 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR HSSP:Q01853 eggNOG:COG0465
GO:GO:0017111 EMBL:AL161503 HOGENOM:HOG000237995 IPI:IPI00526918
PIR:F85067 RefSeq:NP_192447.1 UniGene:At.54165
ProteinModelPortal:Q9M0V7 SMR:Q9M0V7 STRING:Q9M0V7 PaxDb:Q9M0V7
PRIDE:Q9M0V7 EnsemblPlants:AT4G05380.1 GeneID:825886
KEGG:ath:AT4G05380 TAIR:At4g05380 InParanoid:Q9M0V7 OMA:DETEYGE
PhylomeDB:Q9M0V7 ProtClustDB:CLSN2916038 Genevestigator:Q9M0V7
Uniprot:Q9M0V7
Length = 248
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 92/191 (48%), Positives = 124/191 (64%)
Query: 207 IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIY 266
++PE K ++ DL F+NG F++ GRAWKRGYLLYGPPGTGKSS++AA+AN++ Y IY
Sbjct: 1 MEPELKNTLIRDLDAFSNGKDFFKTVGRAWKRGYLLYGPPGTGKSSLVAAIANFMNYSIY 60
Query: 267 DLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYE 326
DL++ V +++ LR++L T ++SI++IED+DCS +
Sbjct: 61 DLQIQSVKDDAMLRQILTSTENRSILLIEDLDCS---------------GADTTCRKENK 105
Query: 327 PEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGR 386
E G + + +TLSGLLNF DGLWS C E+I +FTTNH EKLDPALLR GR
Sbjct: 106 DETEYGENQNKKKKKDPKVTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGR 165
Query: 387 MDMHIFMSYCS 397
MD+HI M YC+
Sbjct: 166 MDVHILMDYCT 176
Score = 236 (88.1 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 55/123 (44%), Positives = 71/123 (57%)
Query: 345 ITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLIL 404
+TLSGLLNF DGLWS C E+I +FTTNH EKLDPALLR GRMD+HI M YC+ P I+
Sbjct: 124 VTLSGLLNFVDGLWSSCVEERIIIFTTNHKEKLDPALLRPGRMDVHILMDYCT-P---IV 179
Query: 405 LKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKC--KAVRELLETLKV 462
K + + + TPA+I+E L+ +K K + E LE+ K+
Sbjct: 180 FKKLAALYLEIEEHELFDPIEKMFLEVKATPAEITEKLMVSKDPDVTLKGLVEFLESKKM 239
Query: 463 KAE 465
E
Sbjct: 240 TKE 242
Score = 37 (18.1 bits), Expect = 5.2e-21, Sum P(2) = 5.2e-21
Identities = 7/16 (43%), Positives = 10/16 (62%)
Query: 144 KKKDKSLILDSYLDFI 159
KKKD + L L+F+
Sbjct: 118 KKKDPKVTLSGLLNFV 133
>TAIR|locus:2086591 [details] [associations]
symbol:AT3G29800 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:CP002686
EMBL:AP000736 HOGENOM:HOG000237995 IPI:IPI00525495
RefSeq:NP_189629.1 UniGene:At.53586 ProteinModelPortal:Q9LJ50
SMR:Q9LJ50 IntAct:Q9LJ50 PRIDE:Q9LJ50 EnsemblPlants:AT3G29800.1
GeneID:822695 KEGG:ath:AT3G29800 TAIR:At3g29800 InParanoid:Q9LJ50
PhylomeDB:Q9LJ50 ArrayExpress:Q9LJ50 Genevestigator:Q9LJ50
Uniprot:Q9LJ50
Length = 440
Score = 291 (107.5 bits), Expect = 8.2e-33, Sum P(2) = 8.2e-33
Identities = 58/166 (34%), Positives = 101/166 (60%)
Query: 136 KRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVS 195
K+ F LR +K + L+ DSY+ F+ KA +I+ K R+L ++ D+ WE+
Sbjct: 104 KQCFELRFDEKHRDLVFDSYIPFVESKAKEIKSKK--RILEMHTYSHCCDT----WETKI 157
Query: 196 FKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIA 255
H S+F+T+ + + K +++D+ F + FY++ GR W R YLL+G PG GK+S++A
Sbjct: 158 LDHHSSFETIVMKEDLKRRLIDDIDLFISKEDFYKRVGRHWMRYYLLHGLPGAGKTSLVA 217
Query: 256 AMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSI 301
A+A YL +D+Y++ V + + R+L+ + SI+++EDID S+
Sbjct: 218 AIAKYLNFDVYNIT-QGVKTDFDTRRLIRRVEDSSILLVEDIDTSL 262
Score = 120 (47.3 bits), Expect = 8.2e-33, Sum P(2) = 8.2e-33
Identities = 37/128 (28%), Positives = 62/128 (48%)
Query: 343 NSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALL 402
+ + LS LL+ WS G ++ +FTTN+ E+ D LL RM+M I+M +C +
Sbjct: 265 SKVALSQLLSSLTWPWSN-GKARVVIFTTNNKERFDQTLLC--RMEMKIYMGHCCFEDFK 321
Query: 403 ILLKNYLG--YXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
L NYLG + + G+A +TP + E L+K++ D A++ L+
Sbjct: 322 TLASNYLGISHDNDAPHRLYPDIKRLIDGQA-VTPGQVVEELMKSQ-DVDVALQSLVRYS 379
Query: 461 KVKAEKNV 468
K ++
Sbjct: 380 SSKENDHI 387
>ASPGD|ASPL0000063397 [details] [associations]
symbol:AN7549 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AACD01000129 EMBL:BN001304
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_680818.1 ProteinModelPortal:Q5AVY1
EnsemblFungi:CADANIAT00000655 GeneID:2869406 KEGG:ani:AN7549.2
HOGENOM:HOG000165936 OMA:RPLAFIR OrthoDB:EOG4BK8C9 Uniprot:Q5AVY1
Length = 650
Score = 314 (115.6 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 81/250 (32%), Positives = 126/250 (50%)
Query: 148 KSLILDSYLDFIMEKANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAI 207
K L+L++ ++ A D KN + ++Y + GS W + P T+ +
Sbjct: 230 KELLLEAQRYYV---AKD---KN-NTVIYRGHKSGSYTE----WSRCMARAPRALSTVVL 278
Query: 208 DPEKKIEIMEDLKDFANGMS--FYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDI 265
D +K ++D+KD+ + + +Y G ++RGYLL+GPPGTGK+S+ A A LG ++
Sbjct: 279 DKAQKDAFIDDIKDYLHPRTRRWYNNRGIPYRRGYLLHGPPGTGKTSLCFAAAGLLGLEL 338
Query: 266 YDLELTEVH-NNSELRKLLMKTSSKSIIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXY 324
Y L L+ + EL L ++ I+++ED+DC+
Sbjct: 339 YLLNLSSKSLDEDELMALFTDLPTRCIVLLEDVDCAGMSQKRTPGSSSNDDNGNSASPEL 398
Query: 325 YEPEMRCGSGSVGGEDG---NNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPAL 381
E SG+ G G ++LSGLLN DG+ +C G +I V TTNH EKLDPAL
Sbjct: 399 QEQGEGNSSGTTTGGTGVFEKQGVSLSGLLNVIDGVAACEG--RILVMTTNHPEKLDPAL 456
Query: 382 LRSGRMDMHI 391
+R GR+D+ I
Sbjct: 457 VRPGRIDLSI 466
Score = 62 (26.9 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 18/64 (28%), Positives = 29/64 (45%)
Query: 428 VGKAEMTPADISEVLIKNKRDKCKAVRELL----ETLKVKAEKNVKHGGIIVKNSDYEEE 483
V E TPA+I L+ +K D +A+ E E + KA+ K D ++E
Sbjct: 549 VPAGEFTPAEIQGYLLNHKTDPERAIEEATRWVGEVKEKKAKTKAKSASANTAKVDGDQE 608
Query: 484 EQEK 487
E ++
Sbjct: 609 EDKR 612
Score = 43 (20.2 bits), Expect = 2.1e-29, Sum P(3) = 2.1e-29
Identities = 8/30 (26%), Positives = 19/30 (63%)
Query: 37 LFNRIFNIFSSYCYFDITEIDGVNTNELYN 66
++++++N+F +C EI + +E+YN
Sbjct: 72 IYSQLYNLFQEHC-ISTAEIR--HDDEVYN 98
>DICTYBASE|DDB_G0291910 [details] [associations]
symbol:bcs1lB "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0291910
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005743 GO:GO:0016887 EMBL:AAFI02000186 eggNOG:COG0465
GO:GO:0051131 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 RefSeq:XP_629907.1 STRING:Q54DY9
EnsemblProtists:DDB0266726 GeneID:8628408 KEGG:ddi:DDB_G0291910
KO:K08900 OMA:RDKSYQW Uniprot:Q54DY9
Length = 458
Score = 323 (118.8 bits), Expect = 6.8e-28, P = 6.8e-28
Identities = 88/254 (34%), Positives = 131/254 (51%)
Query: 159 IMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIM 216
++E+A ++ + ++ L+YT S G GHP K P ++ +D K I+
Sbjct: 168 LIEEAKEMALEKEEGKTLIYT-SMGTDWRRFGHPRR----KRP--ISSVILDKGKSELII 220
Query: 217 EDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELT-EVHN 275
+D+K F N +Y G ++RGYLLYGPPGTGKSS I A+A L I L L + +
Sbjct: 221 QDVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVS 280
Query: 276 NSELRKLLMKTSSKSIIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGS 335
++ L +LL +SII++EDID +I + + G+ S
Sbjct: 281 DTSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPS 340
Query: 336 VGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSY 395
V G +++T SGLLN DG+ + G +I TTNH+EKLD L+R GR+D+ I +
Sbjct: 341 VSS--GGSALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIGL 396
Query: 396 CS-YPALLILLKNY 408
CS Y + LK Y
Sbjct: 397 CSSYQMEQMFLKFY 410
>DICTYBASE|DDB_G0286765 [details] [associations]
symbol:DDB_G0286765 "BCS1-like protein" species:44689
"Dictyostelium discoideum" [GO:0034551 "mitochondrial respiratory
chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0286765 GO:GO:0005524 EMBL:AAFI02000089
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 RefSeq:XP_637666.1
ProteinModelPortal:Q54L95 EnsemblProtists:DDB0229898 GeneID:8625806
KEGG:ddi:DDB_G0286765 InParanoid:Q54L95 OMA:SISIMNM Uniprot:Q54L95
Length = 574
Score = 208 (78.3 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 39/116 (33%), Positives = 70/116 (60%)
Query: 183 SLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLL 242
SLD WE ++ ++ D++ +D +++ DL +F +G +Y TG ++RGYLL
Sbjct: 228 SLDQSSTFWECIACQNKRLVDSVFLDENISEKVVNDLTNFIHGKKWYTDTGVPYRRGYLL 287
Query: 243 YGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSKSIIVIEDID 298
YGPPG+GK+S I +MA G I + +++ ++ + ++ K + +I+V+EDID
Sbjct: 288 YGPPGSGKTSFILSMAGNFGKSISIMNMSKGIHDGNIHSIIQKCNKDTILVLEDID 343
Score = 148 (57.2 bits), Expect = 1.3e-24, Sum P(2) = 1.3e-24
Identities = 30/68 (44%), Positives = 44/68 (64%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
GN+ +T SGLLN DGL S G +I + TTNH+E+L PAL+R GR+D+ + Y S
Sbjct: 356 GNDVLTFSGLLNAIDGLASSDG--RILMMTTNHLERLSPALIRPGRIDLKVKFDYASNHQ 413
Query: 401 LLILLKNY 408
+ ++ K +
Sbjct: 414 IELMFKRF 421
>FB|FBgn0032195 [details] [associations]
symbol:CG4908 species:7227 "Drosophila melanogaster"
[GO:0006461 "protein complex assembly" evidence=ISS] [GO:0005743
"mitochondrial inner membrane" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW GeneTree:ENSGT00390000005415
EMBL:AY089691 RefSeq:NP_609358.1 RefSeq:NP_723532.1 UniGene:Dm.383
SMR:Q9VL22 STRING:Q9VL22 EnsemblMetazoa:FBtr0079949
EnsemblMetazoa:FBtr0079950 GeneID:34360 KEGG:dme:Dmel_CG4908
UCSC:CG4908-RA FlyBase:FBgn0032195 InParanoid:Q9VL22
OrthoDB:EOG40CFZ9 GenomeRNAi:34360 NextBio:788111 Uniprot:Q9VL22
Length = 431
Score = 190 (71.9 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 62/190 (32%), Positives = 92/190 (48%)
Query: 115 WEHVVSPRQTQTFSWRP-LPEEKRGFTLRIKKKDKSLILDSYLDFIMEKANDIRRKNQD- 172
W V R+ QT +P E TL +K + Y D I+E+A + + +
Sbjct: 113 WIQVERTREQQTLDLHMGVPWET--VTLTAFGNNKGI----YFD-ILEEARQLALEATEG 165
Query: 173 -RLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQK 231
+LYT + G GHP + P+ ++ +D I+ D +DF +Y +
Sbjct: 166 KTVLYT-AMGAEWRPFGHPRR----RRPT--GSVVLDRGTSQRIIADCQDFIKSSLWYTQ 218
Query: 232 TGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKS 290
G ++RGYLLYGPPG GKSS I A+A L Y + L L+E + L LL +S
Sbjct: 219 RGIPYRRGYLLYGPPGCGKSSFITALAGELEYSVCLLNLSERGLTDDRLNHLLNVAPEQS 278
Query: 291 IIVIEDIDCS 300
II++EDID +
Sbjct: 279 IILLEDIDAA 288
Score = 156 (60.0 bits), Expect = 6.5e-24, Sum P(2) = 6.5e-24
Identities = 40/121 (33%), Positives = 61/121 (50%)
Query: 340 DGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYP 399
DG N IT SGLLN DG+ S +I TTN+I++LDPAL+R GR+D+ ++ YC+
Sbjct: 303 DGLNRITFSGLLNCLDGVGST--EARIVFMTTNYIDRLDPALVRPGRIDLKEYIGYCTQY 360
Query: 400 ALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLET 459
L + KN+ G++ +PA I +K+K + V + E
Sbjct: 361 QLEEMFKNFFASSDTTKAEEFGKRVNSF-GRSA-SPAQIQGFFMKHKLSSPQTVIDSCED 418
Query: 460 L 460
+
Sbjct: 419 I 419
>ASPGD|ASPL0000041452 [details] [associations]
symbol:AN3131 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001306 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EnsemblFungi:CADANIAT00009943 Uniprot:C8VII7
Length = 497
Score = 210 (79.0 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 44/101 (43%), Positives = 64/101 (63%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
T D++ +D K I+ED+KDF S+Y G ++RGYLLYGPPGTGKSS I A+A
Sbjct: 248 TLDSVILDKGVKERIVEDVKDFLATESWYHDRGIPYRRGYLLYGPPGTGKSSFIQAVAGE 307
Query: 261 LGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVIEDIDCS 300
L YDI L L+E + L +LL ++++++ED+D +
Sbjct: 308 LDYDIAILNLSERGMTDDRLNRLLTIVPKRTLVLLEDVDAA 348
Score = 126 (49.4 bits), Expect = 8.1e-23, Sum P(2) = 8.1e-23
Identities = 28/55 (50%), Positives = 37/55 (67%)
Query: 339 EDGNN--SITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
EDG ++T SGLLN DG+ S E+I TTNH+E+LD AL+R GR+DM +
Sbjct: 358 EDGYRGANVTFSGLLNALDGVASA--EERIVFLTTNHVERLDEALVRPGRVDMTV 410
>ZFIN|ZDB-GENE-040426-938 [details] [associations]
symbol:bcs1l "BCS1-like (yeast)" species:7955
"Danio rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-040426-938
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465
GO:GO:0017111 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 EMBL:AY394959 EMBL:BC045990
IPI:IPI00495335 RefSeq:NP_957476.2 UniGene:Dr.80335
ProteinModelPortal:Q7ZV60 STRING:Q7ZV60 PRIDE:Q7ZV60
Ensembl:ENSDART00000022246 GeneID:394157 KEGG:dre:394157
InParanoid:Q7ZV60 NextBio:20815107 ArrayExpress:Q7ZV60 Bgee:Q7ZV60
Uniprot:Q7ZV60
Length = 420
Score = 188 (71.2 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 45/146 (30%), Positives = 78/146 (53%)
Query: 159 IMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSF-KHPSTFDTLAIDPEKKIEI 215
I+++A ++ K ++ ++YT + G W F + ++ ++ I
Sbjct: 150 ILQEARELALKQEEGRTVMYT--------AMGAEWRPFGFPRRRRPLSSVVLESGVAERI 201
Query: 216 MEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH- 274
++D+K+F +Y G ++RGYLLYGPPG GKSS I A+A LGY I + L++
Sbjct: 202 VDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRSL 261
Query: 275 NNSELRKLLMKTSSKSIIVIEDIDCS 300
++ L LL +SII++ED+D +
Sbjct: 262 SDDRLNHLLSVAPQQSIILLEDVDAA 287
Score = 144 (55.7 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 37/119 (31%), Positives = 59/119 (49%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFMSYCSYP 399
G +T SGLLN DG+ S SE VF TTN IE+LDPAL+R GR+D+ ++ +CS+
Sbjct: 304 GMGRLTFSGLLNALDGVAS---SEARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCSHW 360
Query: 400 ALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLE 458
L + + + Y + +++ A + + K D A++ + E
Sbjct: 361 QLTQMFRRF--YPQESAAEADHFSEQALAAHTDLSAAQVQGHFMLYKTDPAGAIKNIAE 417
Score = 49 (22.3 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 188 GHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFA----NGMS-FYQKTGRAWK 237
G PWESV TF L D + I+++ ++ A G + Y G W+
Sbjct: 129 GTPWESV------TFTALGRDRQTFFNILQEARELALKQEEGRTVMYTAMGAEWR 177
>SGD|S000002783 [details] [associations]
symbol:BCS1 "Protein translocase and chaperone required for
Complex III assembly" species:4932 "Saccharomyces cerevisiae"
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA;IDA]
[GO:0005739 "mitochondrion" evidence=IEA;IDA] [GO:0008320 "protein
transmembrane transporter activity" evidence=IMP] [GO:0032979
"protein insertion into mitochondrial membrane from inner side"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051131 "chaperone-mediated protein complex assembly"
evidence=IMP;IPI] Reactome:REACT_85873 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000002783
GO:GO:0016021 GO:GO:0005829 GO:GO:0005524 GO:GO:0005743
GO:GO:0005758 EMBL:BK006938 GO:GO:0016887 Reactome:REACT_118590
EMBL:U28373 eggNOG:COG0465 GO:GO:0051131 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
GO:GO:0034551 OrthoDB:EOG4XWK6J EMBL:S47190 PIR:S61170
RefSeq:NP_010663.1 ProteinModelPortal:P32839 SMR:P32839
IntAct:P32839 STRING:P32839 PaxDb:P32839 EnsemblFungi:YDR375C
GeneID:851981 KEGG:sce:YDR375C CYGD:YDR375c NextBio:970127
Genevestigator:P32839 GermOnline:YDR375C GO:GO:0008320
GO:GO:0032979 Uniprot:P32839
Length = 456
Score = 196 (74.1 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 54/156 (34%), Positives = 83/156 (53%)
Query: 149 SLILDSYL-DFIMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTL 205
+L D +L D I+ +A DI K + ++YT S G G P K ++
Sbjct: 176 TLYRDKHLFDDILNEAKDIALKTTEGKTVIYT-SFGPEWRKFGQP------KAKRMLPSV 228
Query: 206 AIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDI 265
+D K I++D+ DF +Y G ++RGYLLYGPPG+GK+S I A+A L Y+I
Sbjct: 229 ILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNI 288
Query: 266 YDLELTEVH-NNSELRKLLMKTSSKSIIVIEDIDCS 300
L L+E + + L L+ +SI+++EDID +
Sbjct: 289 CILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAA 324
Score = 136 (52.9 bits), Expect = 2.1e-22, Sum P(2) = 2.1e-22
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 338 GEDG-NNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYC 396
GE G ++S+T SGLLN DG+ S E I TTNH EKLD A++R GR+D +F+
Sbjct: 332 GEQGFHSSVTFSGLLNALDGVTS--SEETITFMTTNHPEKLDAAIMRPGRIDYKVFVGNA 389
Query: 397 S-YPALLILLKNYLG 410
+ Y + +K Y G
Sbjct: 390 TPYQVEKMFMKFYPG 404
>RGD|1359658 [details] [associations]
symbol:Bcs1l "BC1 (ubiquinol-cytochrome c reductase)
synthesis-like" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007005
"mitochondrion organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly"
evidence=IEA;ISO] [GO:0033617 "mitochondrial respiratory chain
complex IV assembly" evidence=IEA;ISO] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA;ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1359658 GO:GO:0005739 GO:GO:0005524 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0
GO:GO:0034551 GO:GO:0033617 EMBL:CH474004 EMBL:BC083660
IPI:IPI00213929 RefSeq:NP_001007667.1 UniGene:Rn.15293
IntAct:Q5XIM0 STRING:Q5XIM0 Ensembl:ENSRNOT00000022632
GeneID:301514 KEGG:rno:301514 UCSC:RGD:1359658 InParanoid:Q5XIM0
NextBio:648873 Genevestigator:Q5XIM0 Uniprot:Q5XIM0
Length = 418
Score = 176 (67.0 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 37/115 (32%), Positives = 64/115 (55%)
Query: 188 GHPWESVSF-KHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPP 246
G W + + + D++ + I++D+++F + +Y G ++RGYLLYGPP
Sbjct: 173 GSEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPP 232
Query: 247 GTGKSSMIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVIEDIDCS 300
G GKSS I A+A L + I L LT+ ++ L LL +S++++ED+D +
Sbjct: 233 GCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 153 (58.9 bits), Expect = 4.9e-22, Sum P(2) = 4.9e-22
Identities = 37/121 (30%), Positives = 62/121 (51%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G +T SGLLN DG+ S +I TTNHI++LDPAL+R GR+D+ ++ YCS+
Sbjct: 303 GLGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDLKEYVGYCSHWQ 360
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
L + + + Y + ++++PA + + K D A+ + E+L
Sbjct: 361 LTQMFQRF--YPGQAPSLAENFAEHVLKATSQISPAQVQGYFMLYKNDPMGAIHNV-ESL 417
Query: 461 K 461
+
Sbjct: 418 R 418
Score = 52 (23.4 bits), Expect = 6.5e-09, Sum P(2) = 6.5e-09
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 188 GHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFA----NGMS-FYQKTGRAWKR-GY 240
G PWESV TF L D + I+E+ + A G + Y G W+ GY
Sbjct: 129 GTPWESV------TFTALGTDRKVFFNILEEARALALQQEEGKTVMYTAVGSEWRTFGY 181
>MGI|MGI:1914071 [details] [associations]
symbol:Bcs1l "BCS1-like (yeast)" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=ISO] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=ISO]
[GO:0033617 "mitochondrial respiratory chain complex IV assembly"
evidence=ISO] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1914071 GO:GO:0016021 GO:GO:0005739
GO:GO:0005524 GO:GO:0005743 eggNOG:COG0465 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
HOVERGEN:HBG048759 OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617
EMBL:AK012324 EMBL:AK078925 EMBL:AK079385 EMBL:BC019781
IPI:IPI00112986 RefSeq:NP_080060.1 UniGene:Mm.358700
ProteinModelPortal:Q9CZP5 SMR:Q9CZP5 STRING:Q9CZP5
PhosphoSite:Q9CZP5 PaxDb:Q9CZP5 PRIDE:Q9CZP5 DNASU:66821
Ensembl:ENSMUST00000027358 Ensembl:ENSMUST00000113732
Ensembl:ENSMUST00000113733 GeneID:66821 KEGG:mmu:66821
UCSC:uc007bmq.1 InParanoid:Q9CZP5 NextBio:322735 Bgee:Q9CZP5
CleanEx:MM_BCS1L Genevestigator:Q9CZP5
GermOnline:ENSMUSG00000026172 Uniprot:Q9CZP5
Length = 418
Score = 176 (67.0 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 37/115 (32%), Positives = 64/115 (55%)
Query: 188 GHPWESVSF-KHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPP 246
G W + + + D++ + I++D+++F + +Y G ++RGYLLYGPP
Sbjct: 173 GSEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPP 232
Query: 247 GTGKSSMIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVIEDIDCS 300
G GKSS I A+A L + I L LT+ ++ L LL +S++++ED+D +
Sbjct: 233 GCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 152 (58.6 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 38/121 (31%), Positives = 62/121 (51%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G +T SGLLN DG+ S +I TTN+I++LDPAL+R GR+D+ ++ YCS+
Sbjct: 303 GLGRLTFSGLLNALDGVAST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQ 360
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
L + + + Y + +E++PA + + K D AV + E+L
Sbjct: 361 LTQMFQRF--YPGQAPSLAENFAEHVLKATSEISPAQVQGYFMLYKNDPMGAVHNI-ESL 417
Query: 461 K 461
+
Sbjct: 418 R 418
Score = 52 (23.4 bits), Expect = 8.4e-09, Sum P(2) = 8.4e-09
Identities = 19/59 (32%), Positives = 25/59 (42%)
Query: 188 GHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFA----NGMS-FYQKTGRAWKR-GY 240
G PWESV TF L D + I+E+ + A G + Y G W+ GY
Sbjct: 129 GTPWESV------TFTALGTDRKVFFNILEEARALALQQEEGKTVMYTAVGSEWRTFGY 181
>CGD|CAL0005742 [details] [associations]
symbol:orf19.458 species:5476 "Candida albicans" [GO:0008320
"protein transmembrane transporter activity" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0032979 "protein insertion into mitochondrial membrane from
inner side" evidence=IEA] [GO:0051131 "chaperone-mediated protein
complex assembly" evidence=IEA] [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 CGD:CAL0005742 GO:GO:0005524
eggNOG:COG0465 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
HOGENOM:HOG000198799 EMBL:AACQ01000078 EMBL:AACQ01000077
RefSeq:XP_715892.1 RefSeq:XP_715943.1 ProteinModelPortal:Q5A283
STRING:Q5A283 GeneID:3642454 GeneID:3642502 KEGG:cal:CaO19.458
KEGG:cal:CaO19.8089 Uniprot:Q5A283
Length = 444
Score = 185 (70.2 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 37/87 (42%), Positives = 57/87 (65%)
Query: 215 IMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH 274
I+ D+KDF +Y K G ++RGYLLYGPPG+GK+S I A+A L Y+I L L+E +
Sbjct: 225 IVNDVKDFLTSGEWYHKRGIPYRRGYLLYGPPGSGKTSFIQALAGELDYNICILNLSENN 284
Query: 275 -NNSELRKLLMKTSSKSIIVIEDIDCS 300
+ L L+ ++SI+++ED+D +
Sbjct: 285 LTDDRLNHLMNHIPNRSILLLEDVDAA 311
Score = 141 (54.7 bits), Expect = 1.1e-21, Sum P(2) = 1.1e-21
Identities = 39/120 (32%), Positives = 58/120 (48%)
Query: 342 NNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPAL 401
NN +T SGLLN DG+ S E I TTNH EKLDPALLR GR+D + + + +
Sbjct: 324 NNGVTFSGLLNALDGVASA--EECITFMTTNHPEKLDPALLRPGRVDYKVMIDNATEHQV 381
Query: 402 LILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETLK 461
+ + Y + ++ A + + + NKRD A+ ++ETL+
Sbjct: 382 KRMFLRF--YENEEELCEKFLAKYRKLNMQHVSTAQLQGLFVYNKRDPEAAIA-MIETLQ 438
>ASPGD|ASPL0000007908 [details] [associations]
symbol:AN6397 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001301 eggNOG:COG0465 GO:GO:0017111
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
EMBL:AACD01000108 OrthoDB:EOG4BK8C9 RefSeq:XP_664001.1
ProteinModelPortal:Q5AZ83 EnsemblFungi:CADANIAT00006582
GeneID:2871293 KEGG:ani:AN6397.2 HOGENOM:HOG000201600 OMA:EEANAYS
Uniprot:Q5AZ83
Length = 518
Score = 277 (102.6 bits), Expect = 1.2e-21, P = 1.2e-21
Identities = 88/303 (29%), Positives = 149/303 (49%)
Query: 95 TFGLS--NNDSIYDSFNGVGVLWEHVVSPRQTQTFSWRPLPEEKRGFTLRIKKKDKSLIL 152
TF L N I+ +F G VL+ H +P +T T + + EE+ + +K + SL L
Sbjct: 115 TFELKPFNGSRIF-TFRGRWVLFSHS-APSRTIT-TLQDGAEER----IHLKLQTLSLSL 167
Query: 153 DSYLDFIMEKANDIRRK-NQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEK 211
D L ++E+AN +K + ++ + D W ++ + T+ +D K
Sbjct: 168 DP-LRALIEEANAYSKKLAKSQISVYRAMSNVRDLVR--WNRITTRPSRAISTVILDSCK 224
Query: 212 KIEIMEDLKDFA--NGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLE 269
K +++D++++ + +Y G ++RGYL GPPGTGK+S+ +A+A G DIY L
Sbjct: 225 KKAVLDDMREYLREDTRQWYANHGIPYRRGYLFSGPPGTGKTSLSSALAGVFGLDIYVLS 284
Query: 270 LTEVH-NNSELRKLLMKTSSKSIIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYEPE 328
L + + + S +L + ++ ++++EDID + + +
Sbjct: 285 LLDPNISESHFLRLFSEVPTQCVVLLEDIDAA----GMTLKRANEEPVTADTTASFDVMK 340
Query: 329 MRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
R G+ I+LS LLN DG+ S G +I + TTN + LDPAL+R GR+D
Sbjct: 341 KRARPGAPVPTSPPTPISLSALLNAIDGVSSQEG--RILIMTTNAPQDLDPALIRPGRVD 398
Query: 389 MHI 391
MHI
Sbjct: 399 MHI 401
>UNIPROTKB|E2RE50 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IEA] [GO:0033617 "mitochondrial
respiratory chain complex IV assembly" evidence=IEA] [GO:0032981
"mitochondrial respiratory chain complex I assembly" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 OMA:RDKSYQW CTD:617
GeneTree:ENSGT00390000005415 GO:GO:0034551 GO:GO:0033617
EMBL:AAEX03018156 RefSeq:XP_536070.1 Ensembl:ENSCAFT00000023625
GeneID:478911 KEGG:cfa:478911 NextBio:20854180 Uniprot:E2RE50
Length = 419
Score = 174 (66.3 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 44/145 (30%), Positives = 79/145 (54%)
Query: 159 IMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIM 216
I+E+A ++ + ++ ++YT + G G+P + P T ++ + I+
Sbjct: 150 ILEEARELALQQEEGKTVMYT-AMGSEWRPFGYPRR----RRPLT--SVVLGQGLADRIV 202
Query: 217 EDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH-N 275
D+++F + +Y G ++RGYLLYGPPG GKSS I A+A L + I L LT+ +
Sbjct: 203 RDVREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLS 262
Query: 276 NSELRKLLMKTSSKSIIVIEDIDCS 300
+ L LL +S++++ED+D +
Sbjct: 263 DDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 151 (58.2 bits), Expect = 1.4e-21, Sum P(2) = 1.4e-21
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G +T SGLLN DG+ S +I TTNH+++LDPAL+R GR+DM ++ YCS+
Sbjct: 303 GLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDMKEYVGYCSHWQ 360
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
L + + + Y + +++PA + + K D A+ E+L
Sbjct: 361 LTQMFQRF--YPGQAPSLAEAFAGRVLQVTTQISPAQVQGYFMLYKNDPAGAIHNA-ESL 417
Query: 461 K 461
+
Sbjct: 418 R 418
Score = 54 (24.1 bits), Expect = 6.9e-09, Sum P(2) = 6.9e-09
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 188 GHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFA----NGMS-FYQKTGRAWKR-GY 240
G PWESV TF L D + I+E+ ++ A G + Y G W+ GY
Sbjct: 129 GTPWESV------TFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAMGSEWRPFGY 181
>WB|WBGene00010042 [details] [associations]
symbol:bcs-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 eggNOG:COG0465 GO:GO:0017111 EMBL:Z49967
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
OMA:RDKSYQW GeneTree:ENSGT00390000005415 HOGENOM:HOG000198799
PIR:T22632 RefSeq:NP_001022191.1 ProteinModelPortal:Q20755
SMR:Q20755 STRING:Q20755 PaxDb:Q20755 PRIDE:Q20755
EnsemblMetazoa:F54C9.6a.1 EnsemblMetazoa:F54C9.6a.2
EnsemblMetazoa:F54C9.6a.3 GeneID:174372 KEGG:cel:CELE_F54C9.6
UCSC:F54C9.6a.2 CTD:174372 WormBase:F54C9.6a InParanoid:Q20755
NextBio:883750 ArrayExpress:Q20755 Uniprot:Q20755
Length = 442
Score = 193 (73.0 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 36/88 (40%), Positives = 58/88 (65%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTE- 272
E++ED ++F + ++Y G ++RGYL YGPPGTGKSS I+A+A++ GY + L L+E
Sbjct: 220 ELVEDFQEFISSATWYADRGVPYRRGYLFYGPPGTGKSSFISALASHFGYSVCLLSLSER 279
Query: 273 VHNNSELRKLLMKTSSKSIIVIEDIDCS 300
++ L LL S++++EDID +
Sbjct: 280 TLDDDRLNHLLNTAPPNSVVILEDIDAA 307
Score = 128 (50.1 bits), Expect = 2.8e-21, Sum P(2) = 2.8e-21
Identities = 36/122 (29%), Positives = 56/122 (45%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G + +T SGLLN DG+ C E++ TTN++E+LDPAL+R GR+D + +
Sbjct: 323 GLSRVTFSGLLNALDGV--ACAEERLTFMTTNYVERLDPALIRPGRVDRKQYFGNATDGM 380
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVG-KAEMTPADISEVLIKNKRDKCKAVRELLET 459
L + + Y V K E++PA I + K+D A+ +
Sbjct: 381 LSKMFSRF--YRQPSDSVLADEFVKRVSEHKTELSPAMIQGHFLMYKQDPRAALDNIKNM 438
Query: 460 LK 461
K
Sbjct: 439 FK 440
>UNIPROTKB|Q5E9H5 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9913
"Bos taurus" [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
eggNOG:COG0465 GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW EMBL:BT020945 EMBL:BC103135 IPI:IPI00713658
RefSeq:NP_001015671.1 UniGene:Bt.5278 ProteinModelPortal:Q5E9H5
STRING:Q5E9H5 Ensembl:ENSBTAT00000004967 GeneID:539713
KEGG:bta:539713 CTD:617 GeneTree:ENSGT00390000005415
HOGENOM:HOG000198799 HOVERGEN:HBG048759 InParanoid:Q5E9H5
OrthoDB:EOG4TTGJ0 NextBio:20878172 GO:GO:0034551 GO:GO:0033617
Uniprot:Q5E9H5
Length = 419
Score = 172 (65.6 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 43/145 (29%), Positives = 80/145 (55%)
Query: 159 IMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIM 216
I+E+A ++ + ++ ++YT + G G+P + P +++ ++ I+
Sbjct: 150 ILEEARELALQQEEGKTVMYT-AVGSEWRPFGYPRR----RRP--LNSVVLEQGVTERIV 202
Query: 217 EDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH-N 275
D+++F + +Y G ++RGYLLYGPPG GKSS I A+A L + I L LT+ +
Sbjct: 203 RDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLS 262
Query: 276 NSELRKLLMKTSSKSIIVIEDIDCS 300
+ L LL +S++++ED+D +
Sbjct: 263 DDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 148 (57.2 bits), Expect = 4.8e-21, Sum P(2) = 4.8e-21
Identities = 37/121 (30%), Positives = 60/121 (49%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G +T SGLLN DG+ S +I TTNHI++LDPAL+R GR+DM ++ +CS
Sbjct: 303 GLGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEYVGHCSRWQ 360
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
L + + + Y + +++PA + + K D A++ E+L
Sbjct: 361 LTQMFQRF--YPGQATSLAENFADRVLQATTQISPAQVQGYFMLYKNDPAGAIQNA-ESL 417
Query: 461 K 461
+
Sbjct: 418 R 418
Score = 55 (24.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 188 GHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFA----NGMS-FYQKTGRAWKR-GY 240
G PWESV TF L D + I+E+ ++ A G + Y G W+ GY
Sbjct: 129 GTPWESV------TFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFGY 181
>POMBASE|SPAC644.07 [details] [associations]
symbol:SPAC644.07 "mitochondrial Rieske ISP assembly
ATPase (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=ISS]
[GO:0043623 "cellular protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC644.07 GO:GO:0016021 GO:GO:0005524 EMBL:CU329670
GO:GO:0005743 GO:GO:0016226 eggNOG:COG0465 GO:GO:0043623
InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
KO:K08900 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:D89136 PIR:T42406
RefSeq:NP_593875.1 ProteinModelPortal:Q9P6Q3 STRING:Q9P6Q3
EnsemblFungi:SPAC644.07.1 GeneID:2543663 KEGG:spo:SPAC644.07
OrthoDB:EOG4XWK6J NextBio:20804669 GO:GO:0042623 Uniprot:Q9P6Q3
Length = 449
Score = 185 (70.2 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 39/107 (36%), Positives = 60/107 (56%)
Query: 196 FKHPST---FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSS 252
F HP + ++ ++ K I +D+ DF +Y G ++RGYLLYGPPG+GK+S
Sbjct: 198 FGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTS 257
Query: 253 MIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVIEDID 298
+ A+A L YDI L L E + L LL K+++++ED+D
Sbjct: 258 FLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVD 304
Score = 132 (51.5 bits), Expect = 9.6e-21, Sum P(2) = 9.6e-21
Identities = 30/75 (40%), Positives = 45/75 (60%)
Query: 338 GEDG-NNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYC 396
GE G + ++T SGLLN DG+ S E+I TTNH EKLDPAL+R GR+D+ ++
Sbjct: 314 GEVGFHANVTFSGLLNALDGVTS--SDERIIFMTTNHPEKLDPALVRPGRVDVKAYLGNA 371
Query: 397 SYPALLILLKNYLGY 411
+ + + + G+
Sbjct: 372 TPEQVREMFTRFYGH 386
>UNIPROTKB|Q9Y276 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IMP] [GO:0007005
"mitochondrion organization" evidence=IMP] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0034551 "mitochondrial respiratory chain
complex III assembly" evidence=IMP] [GO:0005750 "mitochondrial
respiratory chain complex III" evidence=TAS] Reactome:REACT_17015
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 EMBL:CH471063 eggNOG:COG0465
GO:GO:0017111 GO:GO:0032981 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
OMA:RDKSYQW CTD:617 HOGENOM:HOG000198799 HOVERGEN:HBG048759
OrthoDB:EOG4TTGJ0 GO:GO:0034551 GO:GO:0033617 EMBL:AF026849
EMBL:AF346835 EMBL:AF516670 EMBL:AF038195 EMBL:AK096210
EMBL:BX571752 EMBL:BC000416 EMBL:BC007500 IPI:IPI00003985
RefSeq:NP_001073335.1 RefSeq:NP_001244271.1 RefSeq:NP_001244272.1
RefSeq:NP_001244273.1 RefSeq:NP_004319.1 UniGene:Hs.471401
ProteinModelPortal:Q9Y276 SMR:Q9Y276 IntAct:Q9Y276
MINT:MINT-1433080 STRING:Q9Y276 PhosphoSite:Q9Y276 DMDM:46397351
PaxDb:Q9Y276 PeptideAtlas:Q9Y276 PRIDE:Q9Y276 DNASU:617
Ensembl:ENST00000359273 Ensembl:ENST00000392109
Ensembl:ENST00000392110 Ensembl:ENST00000392111
Ensembl:ENST00000412366 Ensembl:ENST00000431802
Ensembl:ENST00000439945 GeneID:617 KEGG:hsa:617 UCSC:uc002vip.3
GeneCards:GC02P219523 HGNC:HGNC:1020 HPA:HPA037700 HPA:HPA037701
MIM:124000 MIM:262000 MIM:603358 MIM:603647 neXtProt:NX_Q9Y276
Orphanet:123 Orphanet:53693 Orphanet:1460 Orphanet:255249
Orphanet:254902 PharmGKB:PA25327 InParanoid:Q9Y276 PhylomeDB:Q9Y276
GenomeRNAi:617 NextBio:2497 ArrayExpress:Q9Y276 Bgee:Q9Y276
CleanEx:HS_BCS1L Genevestigator:Q9Y276 GermOnline:ENSG00000074582
GO:GO:0005750 Uniprot:Q9Y276
Length = 419
Score = 170 (64.9 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 43/145 (29%), Positives = 79/145 (54%)
Query: 159 IMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIM 216
I+E+A ++ + ++ ++YT + G G+P + P +++ + I+
Sbjct: 150 ILEEARELALQQEEGKTVMYT-AVGSEWRPFGYPRR----RRP--LNSVVLQQGLADRIV 202
Query: 217 EDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH-N 275
D+++F + +Y G ++RGYLLYGPPG GKSS I A+A L + I L LT+ +
Sbjct: 203 RDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLS 262
Query: 276 NSELRKLLMKTSSKSIIVIEDIDCS 300
+ L LL +S++++ED+D +
Sbjct: 263 DDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 146 (56.5 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G +T SGLLN DG+ S +I TTNH+++LDPAL+R GR+D+ ++ YCS+
Sbjct: 303 GLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQ 360
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
L + + + Y + +++PA + + K D A+ E+L
Sbjct: 361 LTQMFQRF--YPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNA-ESL 417
Query: 461 K 461
+
Sbjct: 418 R 418
Score = 55 (24.4 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 188 GHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFA----NGMS-FYQKTGRAWKR-GY 240
G PWESV TF L D + I+E+ ++ A G + Y G W+ GY
Sbjct: 129 GTPWESV------TFTALGTDRKVFFNILEEARELALQQEEGKTVMYTAVGSEWRPFGY 181
>DICTYBASE|DDB_G0289135 [details] [associations]
symbol:bcs1lA "mitochondrial chaperone BCS1"
species:44689 "Dictyostelium discoideum" [GO:0034551 "mitochondrial
respiratory chain complex III assembly" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0051131 "chaperone-mediated protein complex
assembly" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IEA;ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0289135 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0005743 GenomeReviews:CM000154_GR GO:GO:0016887
eggNOG:COG0465 GO:GO:0051131 EMBL:AAFI02000130 RefSeq:XP_636375.1
EnsemblProtists:DDB0266725 GeneID:8626976 KEGG:ddi:DDB_G0289135
OMA:FITNESW InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 Uniprot:Q54HY8
Length = 421
Score = 191 (72.3 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 44/128 (34%), Positives = 74/128 (57%)
Query: 174 LLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTG 233
++Y N G+ + G+P S+ + ++ + + K +++ED+K F S+Y+ G
Sbjct: 164 VIYINGGNGNWERFGNP-RSIR-----SLSSVILADDLKSKLIEDIKSFITNESWYRNRG 217
Query: 234 RAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSII 292
++RGYLLYG PG GKSS+I A+A L DI + L+ ++ ++ LL KSI+
Sbjct: 218 IPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSIL 277
Query: 293 VIEDIDCS 300
+IEDID +
Sbjct: 278 LIEDIDAA 285
Score = 122 (48.0 bits), Expect = 1.6e-20, Sum P(2) = 1.6e-20
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 340 DGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMS 394
+ NNS+T SGLLN DG+ S G +I TTN IE LD AL+R GR+D+ I +S
Sbjct: 301 NNNNSLTYSGLLNALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVS 353
>UNIPROTKB|I3LFK0 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0033617 "mitochondrial respiratory
chain complex IV assembly" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 Ensembl:ENSSSCT00000027544
Uniprot:I3LFK0
Length = 419
Score = 174 (66.3 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 43/145 (29%), Positives = 80/145 (55%)
Query: 159 IMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIM 216
I+E+A ++ + ++ ++YT + G G+P + P +++ ++ I+
Sbjct: 150 ILEEARELALQQEEGKTVMYT-AVGSEWRPFGYPRR----RRP--LNSVVLEQGLADRIV 202
Query: 217 EDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH-N 275
D+++F + +Y G ++RGYLLYGPPG GKSS I A+A L + I L LT+ +
Sbjct: 203 RDIREFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDSSLS 262
Query: 276 NSELRKLLMKTSSKSIIVIEDIDCS 300
+ L LL +S++++ED+D +
Sbjct: 263 DDRLNHLLSVAPQQSLVLLEDVDAA 287
Score = 138 (53.6 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 34/113 (30%), Positives = 55/113 (48%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G +T SGLLN DG+ S +I TTNH+++LDPAL+R GR+D+ ++ +CS
Sbjct: 303 GLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGHCSRWQ 360
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAV 453
L + + + Y + +++PA + + K D AV
Sbjct: 361 LTQMFQRF--YPGQAPSLAESFADRALQATTQISPAQVQGYFMLYKNDPEGAV 411
Score = 54 (24.1 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 19/59 (32%), Positives = 26/59 (44%)
Query: 188 GHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFA----NGMS-FYQKTGRAWKR-GY 240
G PWESV TF L D + I+E+ ++ A G + Y G W+ GY
Sbjct: 129 GTPWESV------TFTALGTDRKIFFNILEEARELALQQEEGKTVMYTAVGSEWRPFGY 181
>UNIPROTKB|G4MXF6 [details] [associations]
symbol:MGG_15496 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
RefSeq:XP_003713293.1 EnsemblFungi:MGG_15496T0 GeneID:12986165
KEGG:mgr:MGG_15496 Uniprot:G4MXF6
Length = 676
Score = 264 (98.0 bits), Expect = 7.9e-20, P = 7.9e-20
Identities = 79/254 (31%), Positives = 124/254 (48%)
Query: 159 IMEKANDIRRKNQ-DRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIME 217
I + ND R + R Y R G W+S + T+ D + K +++
Sbjct: 209 IKQFLNDCRDWGEAQRARYVTVRTCKKSYNGAHWDSTILRPTRPIQTVHFDEQVKKDLIA 268
Query: 218 DLKDFANGMS--FYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHN 275
D+ ++ + + FY + G ++RGYLL+GPPGTGK+S+ A+A+ ++Y L + + N
Sbjct: 269 DIINYLDPHTRDFYHQRGIPYRRGYLLHGPPGTGKTSLSLALASMFKLELYLLHVPSLAN 328
Query: 276 NSELRKLLMKTSSKSIIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMRCGSGS 335
+ EL + + + II++EDID ++ E E GSG
Sbjct: 329 DGELESMFDELPPRCIILLEDID-AVGIPRRNELAARMTGLDDKDDDEDDEDEEN-GSGR 386
Query: 336 VGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSY 395
G + TLSGLLN DG+ S G +I T+N +KLDPAL+R GR+D IF+
Sbjct: 387 -----GRS--TLSGLLNVLDGVASQEG--RIVFMTSNLADKLDPALVRPGRIDRKIFLGN 437
Query: 396 CSYP-ALLILLKNY 408
+ A L+ L+ Y
Sbjct: 438 INQESARLMFLRMY 451
>UNIPROTKB|F1P1Q6 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0034551 "mitochondrial respiratory chain complex III
assembly" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024
GeneTree:ENSGT00390000005415 EMBL:AADN02016784 IPI:IPI00819859
PRIDE:F1P1Q6 Ensembl:ENSGALT00000038219 Uniprot:F1P1Q6
Length = 419
Score = 180 (68.4 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 44/146 (30%), Positives = 79/146 (54%)
Query: 159 IMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSF-KHPSTFDTLAIDPEKKIEI 215
I+++A ++ + Q+ ++YT + G W F + ++ ++ +
Sbjct: 150 ILQEARELALQQQEGRTIMYT--------AMGTEWRQFGFPRRRRPLSSVVLEKGVSERL 201
Query: 216 MEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH- 274
+ED+K+F + +Y + G ++RGYLLYGPPG GKSS I A+A L + I L L++
Sbjct: 202 VEDVKEFIDNPKWYIERGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRSL 261
Query: 275 NNSELRKLLMKTSSKSIIVIEDIDCS 300
++ L LL +SII++ED+D +
Sbjct: 262 SDDRLNYLLSVAPQQSIILLEDVDAA 287
Score = 127 (49.8 bits), Expect = 8.9e-20, Sum P(2) = 8.9e-20
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G +T SGLLN DG+ S +I TTN++++LDPAL+R GR+D+ ++ +CS
Sbjct: 303 GMGRLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQ 360
Query: 401 LLILLKNY 408
L + + +
Sbjct: 361 LARMFQRF 368
Score = 40 (19.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 188 GHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFA----NGMSF-YQKTGRAWKR 238
G WESV TF L + E I+++ ++ A G + Y G W++
Sbjct: 129 GTAWESV------TFTALGTNREIFFNILQEARELALQQQEGRTIMYTAMGTEWRQ 178
>UNIPROTKB|G4MN83 [details] [associations]
symbol:MGG_02058 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
EMBL:CM001231 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 KO:K08900 RefSeq:XP_003708818.1
EnsemblFungi:MGG_02058T0 GeneID:2681213 KEGG:mgr:MGG_02058
Uniprot:G4MN83
Length = 566
Score = 253 (94.1 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 63/205 (30%), Positives = 104/205 (50%)
Query: 191 WESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMS--FYQKTGRAWKRGYLLYGPPGT 248
W V+ + T+ +D E+K ++ D+ ++ + +Y G +RGYL +GPPGT
Sbjct: 258 WREVAKRPVRPISTVVLDQEQKTAVLSDMNEYLQPKTECWYSNRGIPLRRGYLFHGPPGT 317
Query: 249 GKSSMIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVIEDIDCS-IXXXXX 306
GK+S+ A+A G +IY + L E ++ +L L + I+++EDID + +
Sbjct: 318 GKTSLSFALAGVFGLEIYVISLIEPQLSDEDLSTLFNGLPRRCIVLLEDIDTAGMSRAEG 377
Query: 307 XXXXXXXXXXXXXXXXXYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKI 366
++ G G G+D I++SGLLN DG+ + G +I
Sbjct: 378 EIRTETKTEGPSEWKVADLARALKVGRGH--GDD-QKGISMSGLLNVIDGVAAHEG--RI 432
Query: 367 FVFTTNHIEKLDPALLRSGRMDMHI 391
F+ TTN E LD AL+RSGR+D+ +
Sbjct: 433 FIMTTNKPEILDEALIRSGRVDLQV 457
Score = 49 (22.3 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 432 EMTPADISEVLIKNKRDKCKAVRELLETLKVKAE 465
+M+PA+I L+K K KA+R++ +K +
Sbjct: 524 QMSPAEIQGFLLKRKTCPRKALRDVEAWVKTSLD 557
>UNIPROTKB|E1BWG5 [details] [associations]
symbol:BCS1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032981 "mitochondrial
respiratory chain complex I assembly" evidence=IEA] [GO:0033617
"mitochondrial respiratory chain complex IV assembly" evidence=IEA]
[GO:0034551 "mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0017111
GO:GO:0032981 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW GeneTree:ENSGT00390000005415
GO:GO:0034551 GO:GO:0033617 EMBL:AADN02016784 IPI:IPI00579056
Ensembl:ENSGALT00000018571 Uniprot:E1BWG5
Length = 420
Score = 176 (67.0 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 45/147 (30%), Positives = 80/147 (54%)
Query: 159 IMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSF-KHPSTFDTLAIDPEKKIEI 215
I+++A ++ + Q+ ++YT + G W F + ++ ++ +
Sbjct: 150 ILQEARELALQQQEGRTIMYT--------AMGTEWRQFGFPRRRRPLSSVVLEKGVSERL 201
Query: 216 MEDLKDFANGMSFYQKTGRA-WKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH 274
+ED+K+F + +Y + G+A +RGYLLYGPPG GKSS I A+A L + I L L++
Sbjct: 202 VEDVKEFIDNPKWYIERGKAPVRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLSDRS 261
Query: 275 -NNSELRKLLMKTSSKSIIVIEDIDCS 300
++ L LL +SII++ED+D +
Sbjct: 262 LSDDRLNYLLSVAPQQSIILLEDVDAA 288
Score = 127 (49.8 bits), Expect = 2.6e-19, Sum P(2) = 2.6e-19
Identities = 26/68 (38%), Positives = 42/68 (61%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G +T SGLLN DG+ S +I TTN++++LDPAL+R GR+D+ ++ +CS
Sbjct: 304 GMGRLTFSGLLNALDGVAST--EARIVFMTTNYVDRLDPALVRPGRVDLKQYVGHCSRGQ 361
Query: 401 LLILLKNY 408
L + + +
Sbjct: 362 LARMFQRF 369
Score = 40 (19.1 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 188 GHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFA----NGMSF-YQKTGRAWKR 238
G WESV TF L + E I+++ ++ A G + Y G W++
Sbjct: 129 GTAWESV------TFTALGTNREIFFNILQEARELALQQQEGRTIMYTAMGTEWRQ 178
>UNIPROTKB|G4MYI1 [details] [associations]
symbol:MGG_10383 "Mitochondrial chaperone BCS1"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001232 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003713408.1 ProteinModelPortal:G4MYI1
EnsemblFungi:MGG_10383T0 GeneID:2681994 KEGG:mgr:MGG_10383
Uniprot:G4MYI1
Length = 494
Score = 170 (64.9 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 37/114 (32%), Positives = 65/114 (57%)
Query: 187 RGHPWESVSF-KHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGP 245
+G W + + ++ + K I+ED++DF + +Y G ++R YLL+GP
Sbjct: 221 QGMSWAQLGLPRRKRPLASVVFEKGLKEAIVEDVQDFLSRHQWYADRGIPYRRTYLLHGP 280
Query: 246 PGTGKSSMIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVIEDID 298
PG+GKSS I A+A L Y++ + L E + +L +LM+ +SI+++ED+D
Sbjct: 281 PGSGKSSFIHALAGELDYNLAIVNLVERGLTDDKLANMLMRLPPRSILLLEDVD 334
Score = 124 (48.7 bits), Expect = 5.0e-18, Sum P(2) = 5.0e-18
Identities = 23/48 (47%), Positives = 35/48 (72%)
Query: 344 SITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
++T SGLLN DG+ G ++I TTN++E+LDPAL+R GR+D+ +
Sbjct: 352 TVTYSGLLNVLDGM--AAGEDRIAFLTTNYVERLDPALIRPGRVDVKV 397
>GENEDB_PFALCIPARUM|PFF0155w [details] [associations]
symbol:PFF0155w "bcs1-like protein, putative"
species:5833 "Plasmodium falciparum" [GO:0005743 "mitochondrial
inner membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0006461
GO:GO:0016887 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 OMA:RDKSYQW HOGENOM:HOG000198799 EMBL:AL844505
RefSeq:XP_966022.1 ProteinModelPortal:C6KSN2
EnsemblProtists:PFF0155w:mRNA GeneID:3885965 KEGG:pfa:PFF0155w
EuPathDB:PlasmoDB:PF3D7_0603200 ProtClustDB:CLSZ2429496
Uniprot:C6KSN2
Length = 471
Score = 243 (90.6 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 73/247 (29%), Positives = 118/247 (47%)
Query: 158 FIMEKA-ND----IRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKK 212
++ EK ND I +K + + L S G G+P K+ +++ + PE
Sbjct: 173 YVFEKILNDAKVYIEKKEEGKTLVYKSFGPEWRPFGNP------KNKRPINSVIL-PENL 225
Query: 213 IE-IMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELT 271
E I+ D++ F N +Y G ++R YLL+GPPG GKSS+I A+A Y ++I + +
Sbjct: 226 NEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNICTININ 285
Query: 272 EVH-NNSELRKLLMKTSSKSIIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMR 330
+++ + LL K+I+++EDID I +
Sbjct: 286 DIYLTDDRFIHLLATIPPKTILILEDIDF-IFINDPIMKYTNNDQNSSSNSSIFTGTNNH 344
Query: 331 CGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMH 390
++G ++ SGLLN DG+ + E+I TTN+IEKL P L+R GR+DM
Sbjct: 345 STIKTLG-------VSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRPGRVDMK 395
Query: 391 IFMSYCS 397
I + Y +
Sbjct: 396 ILIPYAN 402
>UNIPROTKB|C6KSN2 [details] [associations]
symbol:PFF0155w "Bcs1 protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006461 "protein complex assembly" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0006461 GO:GO:0016887 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 OMA:RDKSYQW
HOGENOM:HOG000198799 EMBL:AL844505 RefSeq:XP_966022.1
ProteinModelPortal:C6KSN2 EnsemblProtists:PFF0155w:mRNA
GeneID:3885965 KEGG:pfa:PFF0155w EuPathDB:PlasmoDB:PF3D7_0603200
ProtClustDB:CLSZ2429496 Uniprot:C6KSN2
Length = 471
Score = 243 (90.6 bits), Expect = 7.4e-18, P = 7.4e-18
Identities = 73/247 (29%), Positives = 118/247 (47%)
Query: 158 FIMEKA-ND----IRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKK 212
++ EK ND I +K + + L S G G+P K+ +++ + PE
Sbjct: 173 YVFEKILNDAKVYIEKKEEGKTLVYKSFGPEWRPFGNP------KNKRPINSVIL-PENL 225
Query: 213 IE-IMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELT 271
E I+ D++ F N +Y G ++R YLL+GPPG GKSS+I A+A Y ++I + +
Sbjct: 226 NEYIINDIQTFLNSSKWYIDKGIPYRRCYLLHGPPGCGKSSLITALAGYFDFNICTININ 285
Query: 272 EVH-NNSELRKLLMKTSSKSIIVIEDIDCSIXXXXXXXXXXXXXXXXXXXXXXYYEPEMR 330
+++ + LL K+I+++EDID I +
Sbjct: 286 DIYLTDDRFIHLLATIPPKTILILEDIDF-IFINDPIMKYTNNDQNSSSNSSIFTGTNNH 344
Query: 331 CGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMH 390
++G ++ SGLLN DG+ + E+I TTN+IEKL P L+R GR+DM
Sbjct: 345 STIKTLG-------VSYSGLLNALDGIVAT--EERIIFMTTNNIEKLPPTLIRPGRVDMK 395
Query: 391 IFMSYCS 397
I + Y +
Sbjct: 396 ILIPYAN 402
>UNIPROTKB|G4NGV5 [details] [associations]
symbol:MGG_04018 "Mitochondrial chaperone BCS1, variant"
species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR027243
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:CM001236 InterPro:IPR014851
PANTHER:PTHR23070:SF2 Pfam:PF08740 SMART:SM01024 KO:K08900
RefSeq:XP_003719831.1 EnsemblFungi:MGG_04018T1 GeneID:2677451
KEGG:mgr:MGG_04018 Uniprot:G4NGV5
Length = 610
Score = 240 (89.5 bits), Expect = 8.8e-18, Sum P(2) = 8.8e-18
Identities = 65/223 (29%), Positives = 104/223 (46%)
Query: 189 HPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMS--FYQKTGRAWKRGYLLYGPP 246
H W SV+ + +T+ +D ++K ++ D+ ++ + +Y G +RGYL +GPP
Sbjct: 269 HSWTSVANRPVRPMNTVVLDQKQKTAVLSDMNEYLQPETPRWYANRGIPLRRGYLFHGPP 328
Query: 247 GTGKSSMIAAMANYLGYDIYDLELTEVHNNSE-LRKLLMKTSSKSIIVIEDIDC------ 299
GTGK+S+ A+A G DIY + L E + E L L + ++++EDID
Sbjct: 329 GTGKTSLSFALAGVFGLDIYVVSLLEPQLSEEDLSNLFNCLPRRCVVLLEDIDTAGLTRT 388
Query: 300 ------SIXXXXXXXXXXXXXXXXXXXXXXYYEPE--MRCGSGSVGGEDGNNSITLSGLL 351
S+ ++ R G G + I+LSGLL
Sbjct: 389 EEKIGHSVRTNTKTTTTTGSNATSPPSGPNEWKVTDLARALKGGRGSDGEQKGISLSGLL 448
Query: 352 NFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMS 394
N DG+ S G ++ + TTN E LD AL+R GR+D+ + S
Sbjct: 449 NAIDGVASHEG--RVLIMTTNRPESLDDALIRPGRVDLQVAFS 489
Score = 48 (22.0 bits), Expect = 8.8e-18, Sum P(2) = 8.8e-18
Identities = 10/35 (28%), Positives = 22/35 (62%)
Query: 432 EMTPADISEVLIKNKRDKCKAVRELLETLKVKAEK 466
+++PA+I L+K ++ KA+R++ +K E+
Sbjct: 565 QLSPAEIQGFLLKRRKWPRKALRDVEGWVKAMVEQ 599
>TAIR|locus:2095467 [details] [associations]
symbol:AT3G28560 "AT3G28560" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0048451 "petal formation" evidence=RCA]
[GO:0048453 "sepal formation" evidence=RCA] EMBL:CP002686
GenomeReviews:BA000014_GR eggNOG:COG0465 EMBL:AP000420
InterPro:IPR025753 Pfam:PF14363 EMBL:AY924779 EMBL:DQ132691
IPI:IPI00534445 RefSeq:NP_189497.1 UniGene:At.53542
UniGene:At.73270 EnsemblPlants:AT3G28560.1 GeneID:822486
KEGG:ath:AT3G28560 TAIR:At3g28560 PhylomeDB:Q9LJJ9
Genevestigator:Q9LJJ9 Uniprot:Q9LJJ9
Length = 257
Score = 201 (75.8 bits), Expect = 2.1e-15, P = 2.1e-15
Identities = 50/179 (27%), Positives = 85/179 (47%)
Query: 36 KLFNRIFNIFSSYCYFDITEIDGVNTNELYNAVQXXXXXXXXXXXXXXXXTRALNSSAIT 95
KL + N S + F+ +G+ +E ++ + + S ++
Sbjct: 36 KLMGWVSN--SVHIKFNEYSGEGLEKSEAFDTIHNYLSTKSTALGNRLKANESKKSKSLV 93
Query: 96 FGLSNNDSIYDSFNGVGVLWEHVVSPRQTQTFSWRPLP-EEKRGFTLRIKKKDKSLILDS 154
L +++++ D F GV V W V Q Q+ + R E+R TL + + +I +
Sbjct: 94 LSLDDHETVEDVFQGVKVKWSSSVRENQNQSSTNRDKGFAERRYLTLSFHSRHREMITTT 153
Query: 155 YLDFIMEKANDIRRKNQDRLLYTNSRGGSLDS-R-GHPWESVSFKHPSTFDTLAIDPEK 211
YLD ++ + +I K ++R LYTN+ S R G W +VSF HP+T +T A+DPEK
Sbjct: 154 YLDHVLREGKEIGLKKRERKLYTNNSSHEWISWRLGTNWSNVSFDHPATLETFAMDPEK 212
>TAIR|locus:2115914 [details] [associations]
symbol:AT4G05340 species:3702 "Arabidopsis thaliana"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004
PROSITE:PS00674 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0016787 eggNOG:COG0465
EMBL:AL161503 HSSP:P28691 IPI:IPI00522068 PIR:B85067
RefSeq:NP_192443.1 UniGene:At.54163 ProteinModelPortal:Q9M0W1
SMR:Q9M0W1 EnsemblPlants:AT4G05340.1 GeneID:825882
KEGG:ath:AT4G05340 TAIR:At4g05340 InParanoid:Q9M0W1
PhylomeDB:Q9M0W1 ArrayExpress:Q9M0W1 Genevestigator:Q9M0W1
Uniprot:Q9M0W1
Length = 96
Score = 190 (71.9 bits), Expect = 3.3e-14, P = 3.3e-14
Identities = 37/68 (54%), Positives = 46/68 (67%)
Query: 332 GSGSVGGEDGNNS--ITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
G+G + N ++LSGLL F DGLWS E+I +FTTNH EKLDPA LR G+MD+
Sbjct: 12 GNGEKQNKKKKNDPQVSLSGLLYFVDGLWSNSVEERIIIFTTNHKEKLDPAFLRPGKMDV 71
Query: 390 HIFMSYCS 397
HI M YC+
Sbjct: 72 HILMDYCT 79
>UNIPROTKB|H7BZF6 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0034551 "mitochondrial respiratory chain complex
III assembly" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR027243
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7BZF6 Ensembl:ENST00000436603 Uniprot:H7BZF6
Length = 121
Score = 141 (54.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 236 WKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVI 294
++RGYLLYGPPG GKSS I A+A L + I L LT+ ++ L LL +S++++
Sbjct: 4 YRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLL 63
Query: 295 EDIDCS 300
ED+D +
Sbjct: 64 EDVDAA 69
Score = 66 (28.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 15/36 (41%), Positives = 21/36 (58%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEK 376
G +T SGLLN DG+ S +I TTNH+++
Sbjct: 85 GLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDR 118
>UNIPROTKB|H7C492 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR027243 Pfam:PF00004 PROSITE:PS00674 GO:GO:0005524
PANTHER:PTHR23070:SF2 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
ProteinModelPortal:H7C492 Ensembl:ENST00000426649 Uniprot:H7C492
Length = 201
Score = 146 (56.5 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 36/121 (29%), Positives = 60/121 (49%)
Query: 341 GNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPA 400
G +T SGLLN DG+ S +I TTNH+++LDPAL+R GR+D+ ++ YCS+
Sbjct: 85 GLGRLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQ 142
Query: 401 LLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
L + + + Y + +++PA + + K D A+ E+L
Sbjct: 143 LTQMFQRF--YPGQAPSLAENFAEHVLRATNQISPAQVQGYFMLYKNDPVGAIHNA-ESL 199
Query: 461 K 461
+
Sbjct: 200 R 200
Score = 55 (24.4 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 254 IAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVIEDIDCS 300
+ ++A L + I L LT+ ++ L LL +S++++ED+D +
Sbjct: 22 VLSLAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAA 69
>TIGR_CMR|CJE_1085 [details] [associations]
symbol:CJE_1085 "cell division protein FtsH, putative"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0051301 EMBL:CP000025 GenomeReviews:CP000025_GR
eggNOG:COG0465 GO:GO:0017111 HOGENOM:HOG000217276 KO:K01417
RefSeq:YP_179078.1 ProteinModelPortal:Q5HUF7 SMR:Q5HUF7
STRING:Q5HUF7 GeneID:3231594 KEGG:cjr:CJE1085 PATRIC:20043979
OMA:HRSDERE ProtClustDB:CLSK2395802
BioCyc:CJEJ195099:GJC0-1111-MONOMER Uniprot:Q5HUF7
Length = 538
Score = 112 (44.5 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 32/78 (41%), Positives = 40/78 (51%)
Query: 334 GSVGGEDGN--NSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G GE N TL+ LL DG G I + TN IE +DPALLRSGR D I
Sbjct: 257 GKARGEMSNVERDSTLNQLLTQMDGFEDNSGV--IVIAATNKIELMDPALLRSGRFDRRI 314
Query: 392 FMSYCSYPALLILLKNYL 409
F+S + L +L+ Y+
Sbjct: 315 FLSLPDFKDRLKILEIYM 332
Score = 107 (42.7 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 42/141 (29%), Positives = 66/141 (46%)
Query: 166 IRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANG 225
I KNQ+ NS +L+S H +S TF+ +A E K+E+ E L DF
Sbjct: 120 ISNKNQNHTQAQNSNI-NLES-SHIKPVIS---NITFNDVAGVDEVKMELSE-LVDFLQN 173
Query: 226 MSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIY---DLELTEVH---NNSEL 279
Y++ G +G L+ GPPG GK+ + A+A G + E++ +
Sbjct: 174 PKKYKEFGVKMPKGVLMVGPPGVGKTLIAKAVAGEAGVPFFYQSGSSFVEIYVGMGAKRV 233
Query: 280 RKLLMKTS--SKSIIVIEDID 298
R+L K + SI+ I++ID
Sbjct: 234 RELFSKAKMMAPSIVFIDEID 254
>UNIPROTKB|P0C5C0 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:1773 "Mycobacterium tuberculosis" [GO:0005829 "cytosol"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP;IDA] [GO:0006979 "response
to oxidative stress" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IMP] [GO:0040007
"growth" evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0040007 GO:GO:0006979 EMBL:AE000516
GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR GO:GO:0046872
EMBL:BX842583 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0010468
HOGENOM:HOG000217276 KO:K03798 PIR:C70956 RefSeq:NP_218127.1
RefSeq:NP_338259.1 RefSeq:YP_006517099.1 ProteinModelPortal:P0C5C0
SMR:P0C5C0 PRIDE:P0C5C0 EnsemblBacteria:EBMYCT00000001212
EnsemblBacteria:EBMYCT00000069111 GeneID:13317218 GeneID:885732
GeneID:926520 KEGG:mtc:MT3714 KEGG:mtu:Rv3610c KEGG:mtv:RVBD_3610c
PATRIC:18129921 TubercuList:Rv3610c OMA:RSEMIAR
ProtClustDB:CLSK792593 Uniprot:P0C5C0
Length = 760
Score = 128 (50.1 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 36/108 (33%), Positives = 56/108 (51%)
Query: 200 STF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
+TF D +D + +E + ++KDF S YQ G +G LLYGPPGTGK+ + A+A
Sbjct: 160 TTFADVAGVD--EAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVA 217
Query: 259 NYLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
G + + + E+ S +R L K +S II +++ID
Sbjct: 218 GEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEID 265
Score = 90 (36.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 27/63 (42%), Positives = 32/63 (50%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG G I + TN + LDPALLR GR D I
Sbjct: 272 GAGLGGGHDEREQ-TLNQLLVEMDGFGDRAGV--ILIAATNRPDILDPALLRPGRFDRQI 328
Query: 392 FMS 394
+S
Sbjct: 329 PVS 331
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 114 (45.2 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
GS G G + ++ LL DG+ + + +FV TN +++DPALLR GR+D I+
Sbjct: 599 GSHGDAGGASDRVVNQLLTEMDGMNA---KKNVFVIGATNRPDQIDPALLRPGRLDQLIY 655
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ PA L +L+ L G + AD+S ++ ++ + K
Sbjct: 656 VPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHG---FSGADLSYIVQRSAKFAIKD 712
Query: 452 AVRELLETLKVKAEKN-VKHGGIIVKNSDYEEEE 484
++ ++ K+K EK VK + +K + EEE+
Sbjct: 713 SIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEED 746
Score = 101 (40.6 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
+G L+YGPPGTGK+ M A+AN G + + E+ + S LRK + +S
Sbjct: 250 KGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP 309
Query: 290 SIIVIEDID 298
SII I++ID
Sbjct: 310 SIIFIDEID 318
Score = 88 (36.0 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKL 282
YQK G A +G L +GPPGTGK+ + A+A + + ++ E+ + S +R +
Sbjct: 514 YQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 573
Query: 283 LMKT--SSKSIIVIEDID 298
K ++ +++ ++++D
Sbjct: 574 FDKARAAAPTVVFLDELD 591
Score = 65 (27.9 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 347 LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
+S LL DG+ + S + + TN +DPAL R GR D +
Sbjct: 336 VSQLLTLMDGMKA--RSNVVVIAATNRPNSIDPALRRFGRFDREV 378
Score = 42 (19.8 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 141 LRIKKKDKSLILD 153
LR KKKD +L++D
Sbjct: 28 LRRKKKDNALVVD 40
Score = 40 (19.1 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 197 KHPSTFDTLAIDPEKKI 213
+HP F ++ I P K I
Sbjct: 236 RHPQLFKSIGIKPPKGI 252
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 114 (45.2 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 42/154 (27%), Positives = 73/154 (47%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
GS G G + ++ LL DG+ + + +FV TN +++DPALLR GR+D I+
Sbjct: 599 GSHGDAGGASDRVVNQLLTEMDGMNA---KKNVFVIGATNRPDQIDPALLRPGRLDQLIY 655
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ PA L +L+ L G + AD+S ++ ++ + K
Sbjct: 656 VPLPDEPARLSILQAQLRNTPLEPGLDLNEIAKITHG---FSGADLSYIVQRSAKFAIKD 712
Query: 452 AVRELLETLKVKAEKN-VKHGGIIVKNSDYEEEE 484
++ ++ K+K EK VK + +K + EEE+
Sbjct: 713 SIEAQVKINKIKEEKEKVKTEDVDMKVDEVEEED 746
Score = 101 (40.6 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
+G L+YGPPGTGK+ M A+AN G + + E+ + S LRK + +S
Sbjct: 250 KGILMYGPPGTGKTIMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP 309
Query: 290 SIIVIEDID 298
SII I++ID
Sbjct: 310 SIIFIDEID 318
Score = 88 (36.0 bits), Expect = 1.1e-07, Sum P(4) = 1.1e-07
Identities = 21/78 (26%), Positives = 43/78 (55%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKL 282
YQK G A +G L +GPPGTGK+ + A+A + + ++ E+ + S +R +
Sbjct: 514 YQKFGLAPTKGVLFFGPPGTGKTLLAKAVATEVSANFISVKGPELLSMWYGESESNIRDI 573
Query: 283 LMKT--SSKSIIVIEDID 298
K ++ +++ ++++D
Sbjct: 574 FDKARAAAPTVVFLDELD 591
Score = 65 (27.9 bits), Expect = 0.00043, Sum P(4) = 0.00043
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 347 LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
+S LL DG+ + S + + TN +DPAL R GR D +
Sbjct: 336 VSQLLTLMDGMKA--RSNVVVIAATNRPNSIDPALRRFGRFDREV 378
Score = 42 (19.8 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 8/13 (61%), Positives = 11/13 (84%)
Query: 141 LRIKKKDKSLILD 153
LR KKKD +L++D
Sbjct: 28 LRRKKKDNALVVD 40
Score = 40 (19.1 bits), Expect = 5.8e-09, Sum P(4) = 5.8e-09
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 197 KHPSTFDTLAIDPEKKI 213
+HP F ++ I P K I
Sbjct: 236 RHPQLFKSIGIKPPKGI 252
>UNIPROTKB|C9J1S9 [details] [associations]
symbol:BCS1L "Mitochondrial chaperone BCS1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0034551
"mitochondrial respiratory chain complex III assembly"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
InterPro:IPR003959 InterPro:IPR027243 Pfam:PF00004 GO:GO:0005739
GO:GO:0005524 InterPro:IPR014851 PANTHER:PTHR23070:SF2 Pfam:PF08740
SMART:SM01024 HGNC:HGNC:1020 EMBL:AC009974 EMBL:AC079810
IPI:IPI00927724 ProteinModelPortal:C9J1S9 SMR:C9J1S9 STRING:C9J1S9
Ensembl:ENST00000443791 ArrayExpress:C9J1S9 Bgee:C9J1S9
Uniprot:C9J1S9
Length = 150
Score = 140 (54.3 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 39/128 (30%), Positives = 68/128 (53%)
Query: 159 IMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIM 216
I+E+A ++ + ++ ++YT + G G+P + P +++ + I+
Sbjct: 30 ILEEARELALQQEEGKTVMYT-AVGSEWRPFGYPRR----RRP--LNSVVLQQGLADRIV 82
Query: 217 EDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH-N 275
D+++F + +Y G ++RGYLLYGPPG GKSS I A+A L + I L LT+ +
Sbjct: 83 RDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDSSLS 142
Query: 276 NSELRKLL 283
+ L LL
Sbjct: 143 DDRLNHLL 150
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 116 (45.9 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 37/114 (32%), Positives = 56/114 (49%)
Query: 193 SVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSS 252
S FK P F+ +A E K+E++E + DF Y + G +G LL GPPG+GK+
Sbjct: 140 SPHFK-PIRFEEIAGIDESKLELLE-VVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTM 197
Query: 253 MIAAMANYLGYD-IYDL--ELTEVH---NNSELRKLLMKTSS--KSIIVIEDID 298
+ A+A IY E E++ +R+L S SI+ I++ID
Sbjct: 198 LARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEID 251
Score = 75 (31.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 25/63 (39%), Positives = 32/63 (50%)
Query: 333 SGSVGGE-DGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMH 390
SGSV G + TL+ LL DG + I V TN I+ LD ALLR GR D
Sbjct: 259 SGSVNGAGQREHDQTLNQLLVEMDGF---SNTVHIMVIGATNRIDTLDSALLRPGRFDRI 315
Query: 391 IFM 393
+++
Sbjct: 316 VYV 318
Score = 66 (28.3 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 18/72 (25%), Positives = 45/72 (62%)
Query: 437 DISEVLIKNKR--DKCKAVRELLETLKVKAEK-NVKHGGIIVKN-SDYEEEEQEKRALES 492
++++++I N + D K ++E+++ +K K K + K ++K+ S+++E + +K+A E+
Sbjct: 709 ELNKIIIDNDKMGDMKKNIKEVIKKMKKKQSKGSYKTYKNVLKSVSEHKELKTQKKADEN 768
Query: 493 PIEGSDIEDANN 504
I + E ++N
Sbjct: 769 KIVADNNEKSSN 780
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 457 LETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRA--LESPIEGSDI------EDANNCEEG 508
+E LK +KN K + KN E+ +K +E + D E+ NN +
Sbjct: 600 VEMLKNDTKKNEKKSNSVSKNKSTISEDYDKNQNNVEQNYQSHDHTLVKNEENLNNMKND 659
Query: 509 DDDHEEK 515
DD+ +
Sbjct: 660 IDDNNTR 666
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 116 (45.9 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 37/114 (32%), Positives = 56/114 (49%)
Query: 193 SVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSS 252
S FK P F+ +A E K+E++E + DF Y + G +G LL GPPG+GK+
Sbjct: 140 SPHFK-PIRFEEIAGIDESKLELLE-VVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTM 197
Query: 253 MIAAMANYLGYD-IYDL--ELTEVH---NNSELRKLLMKTSS--KSIIVIEDID 298
+ A+A IY E E++ +R+L S SI+ I++ID
Sbjct: 198 LARAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEID 251
Score = 75 (31.5 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 25/63 (39%), Positives = 32/63 (50%)
Query: 333 SGSVGGE-DGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMH 390
SGSV G + TL+ LL DG + I V TN I+ LD ALLR GR D
Sbjct: 259 SGSVNGAGQREHDQTLNQLLVEMDGF---SNTVHIMVIGATNRIDTLDSALLRPGRFDRI 315
Query: 391 IFM 393
+++
Sbjct: 316 VYV 318
Score = 66 (28.3 bits), Expect = 1.0e-08, Sum P(3) = 1.0e-08
Identities = 18/72 (25%), Positives = 45/72 (62%)
Query: 437 DISEVLIKNKR--DKCKAVRELLETLKVKAEK-NVKHGGIIVKN-SDYEEEEQEKRALES 492
++++++I N + D K ++E+++ +K K K + K ++K+ S+++E + +K+A E+
Sbjct: 709 ELNKIIIDNDKMGDMKKNIKEVIKKMKKKQSKGSYKTYKNVLKSVSEHKELKTQKKADEN 768
Query: 493 PIEGSDIEDANN 504
I + E ++N
Sbjct: 769 KIVADNNEKSSN 780
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(3) = 1.3e-06
Identities = 17/67 (25%), Positives = 28/67 (41%)
Query: 457 LETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRA--LESPIEGSDI------EDANNCEEG 508
+E LK +KN K + KN E+ +K +E + D E+ NN +
Sbjct: 600 VEMLKNDTKKNEKKSNSVSKNKSTISEDYDKNQNNVEQNYQSHDHTLVKNEENLNNMKND 659
Query: 509 DDDHEEK 515
DD+ +
Sbjct: 660 IDDNNTR 666
>TIGR_CMR|GSU_1180 [details] [associations]
symbol:GSU_1180 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952233.1 ProteinModelPortal:Q74DY5 SMR:Q74DY5
GeneID:2686793 KEGG:gsu:GSU1180 PATRIC:22025134 OMA:VCQWGMS
ProtClustDB:CLSK828230 BioCyc:GSUL243231:GH27-1166-MONOMER
Uniprot:Q74DY5
Length = 617
Score = 106 (42.4 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 37/125 (29%), Positives = 58/125 (46%)
Query: 182 GSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYL 241
G+ G + S K TFD +A K+E+ E + D+ +Q+ G +G L
Sbjct: 154 GNFSKSGAKMYTPSAKVKVTFDDVAGMENPKMELKE-IVDYLRDPKKFQRIGGKVPKGVL 212
Query: 242 LYGPPGTGKSSMIAAMAN-----YLGYDIYD-LELTEVHNNSELRKLLM--KTSSKSIIV 293
L GPPGTGK+ + A+A +L +E+ +R L K S+ SII
Sbjct: 213 LVGPPGTGKTLLARAVAGEADVTFLSISASQFIEMFVGVGAGRVRDLFATAKKSAPSIIF 272
Query: 294 IEDID 298
I+++D
Sbjct: 273 IDELD 277
Score = 100 (40.3 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 27/60 (45%), Positives = 33/60 (55%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL+ DG S E I + TN + LDPALLR GR D H+
Sbjct: 284 GAGLGGGHDEREQ-TLNQLLSEMDGFDS--HDEVIVMAATNRPDVLDPALLRPGRFDRHV 340
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 111 (44.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 337 GGEDGNNSIT-----LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G DG++S T L+ LLN DG+ G + V TN ++DPALLR GR+D HI
Sbjct: 606 GDRDGDSSTTAASNVLTSLLNEIDGVEELKGV--VIVGATNKPTEIDPALLRPGRLDRHI 663
Query: 392 FMSYCSYPALLILLK 406
+++ Y A L +L+
Sbjct: 664 YVAPPDYDARLQILQ 678
Score = 91 (37.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 25/89 (28%), Positives = 47/89 (52%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFA-NGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
T+D + K+IE+++ + N + + G + RG LL+GPPGTGK+ ++ +AN
Sbjct: 227 TYDQVG-GLSKQIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTMLLRCVAN 285
Query: 260 YLGYDIYDLELTEVHNNSELRKLLMKTSS 288
I + + ++ S + K L +T +
Sbjct: 286 ----SITEAHVLTINGPSIVSKYLGETEN 310
Score = 86 (35.3 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
Identities = 28/97 (28%), Positives = 49/97 (50%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLE 269
E K +++E ++ ++ G + +G LLYGPPG K+ A+A G + ++
Sbjct: 506 ELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTLTAKALATESGLNFLAVK 565
Query: 270 LTEVHNN----SE--LRKLLMKT--SSKSIIVIEDID 298
E+ N SE +R++ K +S SII ++ID
Sbjct: 566 GPEIFNKYVGESERAIREIFRKARAASPSIIFFDEID 602
>POMBASE|SPBC543.09 [details] [associations]
symbol:yta12 "mitochondrial m-AAA protease Yta12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISS] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005745 "m-AAA complex" evidence=ISO] [GO:0006091 "generation
of precursor metabolites and energy" evidence=NAS] [GO:0006465
"signal peptide processing" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0008237 "metallopeptidase activity" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0033108 "mitochondrial respiratory chain complex
assembly" evidence=ISO] [GO:0045041 "protein import into
mitochondrial intermembrane space" evidence=ISO] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC543.09
GO:GO:0005524 GO:GO:0046872 EMBL:CU329671 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0004222 GO:GO:0006091
GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
KO:K08956 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 OMA:LYRFVTT
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0045041 GO:GO:0006465
GO:GO:0033108 RefSeq:NP_596797.1 ProteinModelPortal:Q9HGM3
SMR:Q9HGM3 STRING:Q9HGM3 MEROPS:M41.A14 EnsemblFungi:SPBC543.09.1
GeneID:2541079 KEGG:spo:SPBC543.09 NextBio:20802192 Uniprot:Q9HGM3
Length = 773
Score = 108 (43.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 36/104 (34%), Positives = 51/104 (49%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA---N 259
D +D E K EIME +K F FY++ G RG +L GPPGTGK+ + A A N
Sbjct: 297 DVAGVD-EAKEEIMEFVK-FLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEAN 354
Query: 260 YLGYDIYDLELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
+ E E+ S +R L + ++ II I++ID
Sbjct: 355 VPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEID 398
Score = 93 (37.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 29/59 (49%), Positives = 31/59 (52%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHI 391
G G D S TL+ LL DG S SE I VF TN + LDPALLR GR D I
Sbjct: 408 GQFGSNDERES-TLNQLLVEMDGFTS---SEHIVVFAGTNRPDVLDPALLRPGRFDRQI 462
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 103 (41.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ M A+AN G + + E+ + S LRK + +S
Sbjct: 257 RGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP 316
Query: 290 SIIVIEDID 298
+II I++ID
Sbjct: 317 AIIFIDEID 325
Score = 98 (39.6 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 29/77 (37%), Positives = 40/77 (51%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
GSVG G + ++ LL DG+ S + +FV TN E+LDPAL R GR+D I+
Sbjct: 607 GSVGDAGGASDRVVNQLLTEMDGMTS---KKNVFVIGATNRPEQLDPALCRPGRLDSLIY 663
Query: 393 MSYCSYPALLILLKNYL 409
+ L +LK L
Sbjct: 664 VPLPDELGRLSILKAQL 680
Score = 88 (36.0 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLE 269
E K ++ E ++ + + K G + RG L YGPPGTGK+ + A+AN + ++
Sbjct: 503 EVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 562
Query: 270 LTEV------HNNSELRKLLMKTSSKS--IIVIEDID 298
E+ + S +R + K + + I+ ++++D
Sbjct: 563 GPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELD 599
Score = 63 (27.2 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 347 LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
+S LL DG+ + S + + TN +DPAL R GR D +
Sbjct: 343 VSQLLTLMDGMKA--RSNVVVMAATNRPNSIDPALRRFGRFDREV 385
>UNIPROTKB|G4MMM3 [details] [associations]
symbol:MGG_16395 "ATP-dependent Zn protease" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524
GO:GO:0006508 GO:GO:0008233 EMBL:CM001231 RefSeq:XP_003710407.1
ProteinModelPortal:G4MMM3 EnsemblFungi:MGG_16395T0 GeneID:12986318
KEGG:mgr:MGG_16395 Uniprot:G4MMM3
Length = 477
Score = 124 (48.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 200 STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+++D + +DP K +++D F Y+K WKRG + YGPPG GK+ I A N
Sbjct: 190 ASWDNVILDPSMKQALIDDHMSFFKSRGQYEKLKVPWKRGIIYYGPPGNGKTVSIKATMN 249
Query: 260 YLGYDIYD 267
L Y + D
Sbjct: 250 ML-YKLKD 256
Score = 68 (29.0 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 342 NNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALL-RSGRMD 388
N+S+ S LN DGL + ++ IF+ +TNH+E+LDP + R R D
Sbjct: 301 NDSVR-SYFLNEVDGLKN---NDGIFMIGSTNHLERLDPGISKRPSRFD 345
>UNIPROTKB|Q5LNU8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 112 (44.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 180 RGGSLDSRGHPWESVSFKHPS-TFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWK 237
RGG++ + ++ KH TFD +A ID K E +E++ +F + + G
Sbjct: 132 RGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAK--EELEEIVEFLRNPQKFSRLGGKIP 189
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSK 289
+G LL GPPGTGK+ + A+A G + + + E+ S +R + K ++
Sbjct: 190 KGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAP 249
Query: 290 SIIVIEDID 298
I+ I++ID
Sbjct: 250 CIVFIDEID 258
Score = 84 (34.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG + G I + TN + LDPALLR GR D ++
Sbjct: 265 GAGYGGGNDEREQ-TLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNV 321
>TIGR_CMR|SPO_3105 [details] [associations]
symbol:SPO_3105 "ATP-dependent metalloprotease FtsH"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 EMBL:CP000031 GenomeReviews:CP000031_GR
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 RefSeq:YP_168308.1
ProteinModelPortal:Q5LNU8 SMR:Q5LNU8 GeneID:3195808
KEGG:sil:SPO3105 PATRIC:23379655 OMA:QINMEEV ProtClustDB:CLSK934061
Uniprot:Q5LNU8
Length = 639
Score = 112 (44.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 37/129 (28%), Positives = 64/129 (49%)
Query: 180 RGGSLDSRGHPWESVSFKHPS-TFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWK 237
RGG++ + ++ KH TFD +A ID K E +E++ +F + + G
Sbjct: 132 RGGAMGFGKSKAKMLTEKHGRVTFDDVAGIDEAK--EELEEIVEFLRNPQKFSRLGGKIP 189
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSK 289
+G LL GPPGTGK+ + A+A G + + + E+ S +R + K ++
Sbjct: 190 KGALLVGPPGTGKTLLARAIAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAP 249
Query: 290 SIIVIEDID 298
I+ I++ID
Sbjct: 250 CIVFIDEID 258
Score = 84 (34.6 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 25/60 (41%), Positives = 32/60 (53%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG + G I + TN + LDPALLR GR D ++
Sbjct: 265 GAGYGGGNDEREQ-TLNQLLVEMDGFEANEGV--IILAATNRKDVLDPALLRPGRFDRNV 321
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 98 (39.6 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 33/108 (30%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST+D + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 142 STYDMVGGLDKQIK-EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 200
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + S + R+L + + + SII +++ID
Sbjct: 201 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEID 248
Score = 93 (37.8 bits), Expect = 4.8e-07, Sum P(2) = 4.8e-07
Identities = 28/59 (47%), Positives = 34/59 (57%)
Query: 333 SGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
SGS GG D T+ LLN DG S + K+ + TN I+ LDPALLR GR+D I
Sbjct: 257 SGS-GGGDSEVQRTMLELLNQLDGFEST-KNIKVLM-CTNRIDILDPALLRPGRIDRKI 312
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 99 (39.9 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG L+YGPPGTGK+ M A+AN G + + EV + S LRK + ++
Sbjct: 249 RGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAP 308
Query: 290 SIIVIEDID 298
+II I++ID
Sbjct: 309 AIIFIDEID 317
Score = 96 (38.9 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 42/156 (26%), Positives = 72/156 (46%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
GS+G G + ++ LL DG+ + + +FV TN +++DPA+LR GR+D I+
Sbjct: 598 GSLGDAGGASDRVVNQLLTEMDGMNA---KKNVFVIGATNRPDQIDPAILRPGRLDQLIY 654
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKA 452
+ A L +L L G + AD+ ++ +R A
Sbjct: 655 VPLPDENARLSILNAQLRKTPLEPGLELTAIAKATQG---FSGADLLYIV---QRAAKYA 708
Query: 453 VRELLETLKV-KAEKNVKHGGIIVKNSDY-EEEEQE 486
+++ +E + +AEK VK G V+ +D + EQE
Sbjct: 709 IKDSIEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQE 744
Score = 86 (35.3 bits), Expect = 1.5e-05, Sum P(3) = 1.5e-05
Identities = 25/97 (25%), Positives = 49/97 (50%)
Query: 214 EIMEDLKDFANGMSF----YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLE 269
EI E+LK+ Y K G + +G L YGPPGTGK+ + A+A + + ++
Sbjct: 494 EIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVATEVSANFISVK 553
Query: 270 LTEV------HNNSELRKLLMKT--SSKSIIVIEDID 298
E+ + S +R + K ++ +++ ++++D
Sbjct: 554 GPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELD 590
Score = 65 (27.9 bits), Expect = 0.00037, Sum P(4) = 0.00037
Identities = 16/45 (35%), Positives = 23/45 (51%)
Query: 347 LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
+S LL DG+ + S + + TN +DPAL R GR D +
Sbjct: 335 VSQLLTLMDGMKA--RSNVVVIAATNRPNSIDPALRRFGRFDREV 377
Score = 44 (20.5 bits), Expect = 7.2e-07, Sum P(3) = 7.2e-07
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 131 PLPEEKRGFT-LRIKKKDKSLILDSYLD 157
P E+K LR KKKD L++D ++
Sbjct: 16 PREEDKTATAILRRKKKDNMLLVDDAIN 43
Score = 41 (19.5 bits), Expect = 0.00037, Sum P(4) = 0.00037
Identities = 10/39 (25%), Positives = 19/39 (48%)
Query: 475 VKNSDYEEEEQEKRALESPIEGSDIEDANNCEEGDDDHE 513
+K+S E Q + E +EG D+E + + + + E
Sbjct: 709 IKDS-IEAHRQHEAEKEVKVEGEDVEMTDEGAKAEQEPE 746
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 96 (38.9 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 47/180 (26%), Positives = 88/180 (48%)
Query: 133 PEEKRGFTLRIKKKDKSLI-LDSYLDFIMEKAN-DIRRKNQDRLLYTNSRGGSLDSRGHP 190
P +K+ +++ + K ++ LD +D N + +N+ YT + L ++ P
Sbjct: 78 PMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNES---YTLHK--ILPNKVDP 132
Query: 191 WESVSF--KHP-STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPP 246
S+ K P ST++ + +D + K EI E ++ + G A +G LLYGPP
Sbjct: 133 LVSLMMVEKVPDSTYEMVGGLDKQIK-EIKEVIELPVKHPELFDALGIAQPKGVLLYGPP 191
Query: 247 GTGKSSMIAAMANYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
GTGK+ + A+A++ + EL + + S + R+L + + + SII +++ID
Sbjct: 192 GTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEID 251
Score = 93 (37.8 bits), Expect = 8.0e-07, Sum P(2) = 8.0e-07
Identities = 32/77 (41%), Positives = 41/77 (53%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R SGS GG D T+ LLN DG + + K+ + TN I+ LDPALLR GR+D
Sbjct: 257 RIESGS-GG-DSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDPALLRPGRIDR 312
Query: 390 HIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 313 KIEFPPPNEEARLDILK 329
>TIGR_CMR|GSU_1809 [details] [associations]
symbol:GSU_1809 "cell division protein FtsH"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
RefSeq:NP_952859.2 GeneID:2688702 KEGG:gsu:GSU1809 PATRIC:22026473
ProtClustDB:CLSK828573 BioCyc:GSUL243231:GH27-1860-MONOMER
Uniprot:Q74C66
Length = 610
Score = 104 (41.7 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TF+ +A E K E+ E++ F + K G +G LL GPPGTGK+ + A+A
Sbjct: 151 TFEDVAGVDEAKEEL-EEIIQFLKDPKKFTKLGGRIPKGVLLVGPPGTGKTLLARAVAGE 209
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
G + + + E+ S +R L + K ++ II I++ID
Sbjct: 210 AGVPFFSISGSDFVEMFVGVGASRVRDLFVQGKKNAPCIIFIDEID 255
Score = 89 (36.4 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 43/161 (26%), Positives = 64/161 (39%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG S G I + TN + LDPALLR GR D +
Sbjct: 262 GAGLGGGHDEREQ-TLNQLLVEMDGFESNEGV--ILIAATNRPDVLDPALLRPGRFDRQV 318
Query: 392 FMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEV-----LIKNK 446
+ ++LK + G + AD+S V L+ +
Sbjct: 319 VVPQPDVKGREMILKVHTKKTPLASDVDLGVIARGTPG---FSGADLSNVVNEAALLAAR 375
Query: 447 RDKCKAVRELLETLKVKAEKNVKHGGIIV-----KNSDYEE 482
+DK + + K K V+ +++ KN+ Y E
Sbjct: 376 KDKSFVEMKDFDDAKDKVLMGVERRSMVISEEEKKNTAYHE 416
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 96 (38.9 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 32/108 (29%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST+D + +D + K EI E ++ ++ G A +G +LYGPPGTGK+ + A+A
Sbjct: 141 STYDMVGGLDKQIK-EIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARAVA 199
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + S + R+L + + + SII +++ID
Sbjct: 200 HHTECKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 247
Score = 92 (37.4 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 28/64 (43%), Positives = 35/64 (54%)
Query: 332 GSGSVGGEDGNNSI---TLSGLLNFTDGLWSCCGSEKI-FVFTTNHIEKLDPALLRSGRM 387
GS V G G +S T+ LLN DG S S+ I + TN ++ LDPALLR GR+
Sbjct: 250 GSSRVEGSSGGDSEVQRTMLELLNQLDGFES---SKDIKIIMATNRLDILDPALLRPGRI 306
Query: 388 DMHI 391
D I
Sbjct: 307 DRKI 310
>TAIR|locus:2157637 [details] [associations]
symbol:VAR1 "VARIEGATED 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA;IDA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010304 "PSII
associated light-harvesting complex II catabolic process"
evidence=RCA;TAS] [GO:0009579 "thylakoid" evidence=IDA] [GO:0010205
"photoinhibition" evidence=IMP] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0007275 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006508 GO:GO:0009941
GO:GO:0004222 GO:GO:0016887 EMBL:AB023032 GO:GO:0010205
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0009535
HOGENOM:HOG000217276 KO:K03798 ProtClustDB:CLSN2688633
GO:GO:0010304 EMBL:AY126987 IPI:IPI00517420 RefSeq:NP_568604.1
UniGene:At.21670 UniGene:At.66720 ProteinModelPortal:Q9FH02
SMR:Q9FH02 STRING:Q9FH02 MEROPS:M41.024 PaxDb:Q9FH02 PRIDE:Q9FH02
EnsemblPlants:AT5G42270.1 GeneID:834232 KEGG:ath:AT5G42270
GeneFarm:4746 TAIR:At5g42270 InParanoid:Q9FH02 OMA:RARASMP
PhylomeDB:Q9FH02 Genevestigator:Q9FH02 GermOnline:AT5G42270
Uniprot:Q9FH02
Length = 704
Score = 114 (45.2 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 35/106 (33%), Positives = 51/106 (48%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TF +A + K+E+ E + DF Y G +G LL GPPGTGK+ + A+A
Sbjct: 248 TFGDVAGADQAKLELQE-VVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 306
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLLMKTSSKS--IIVIEDID 298
G + E E+ S +R L K SK+ I+ I++ID
Sbjct: 307 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 352
Score = 79 (32.9 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G GG D T++ LL DG G+ + V TN + LD ALLR GR D
Sbjct: 359 GAGMGGGNDEREQ-TINQLLTEMDGF---SGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 414
Query: 391 I 391
+
Sbjct: 415 V 415
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 97 (39.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 201 TF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
TF D ID E K E+ E + +F Y + G +G LL+G PGTGK+ + A+A
Sbjct: 156 TFADVAGID-EVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAG 213
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
G + + + E+ S +R L K ++ I+ I++ID
Sbjct: 214 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
Score = 95 (38.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/60 (46%), Positives = 32/60 (53%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG S G I + TN + LDPALLR GR D HI
Sbjct: 267 GAGLGGGHDEREQ-TLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHI 323
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 97 (39.2 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 201 TF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
TF D ID E K E+ E + +F Y + G +G LL+G PGTGK+ + A+A
Sbjct: 156 TFADVAGID-EVKEELAE-IVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAG 213
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
G + + + E+ S +R L K ++ I+ I++ID
Sbjct: 214 EAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEID 260
Score = 95 (38.5 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 28/60 (46%), Positives = 32/60 (53%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG S G I + TN + LDPALLR GR D HI
Sbjct: 267 GAGLGGGHDEREQ-TLNQLLVEMDGFNSNEGI--IIIAATNRPDILDPALLRPGRFDRHI 323
>DICTYBASE|DDB_G0272120 [details] [associations]
symbol:rcaA "peptidase M41, FtsH domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0272120 GO:GO:0005524
GO:GO:0016020 GO:GO:0006508 GenomeReviews:CM000151_GR GO:GO:0004222
EMBL:AAFI02000008 GO:GO:0030163 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 ProtClustDB:CLSZ2846729 RefSeq:XP_645267.1
ProteinModelPortal:Q75JS8 SMR:Q75JS8 STRING:Q75JS8
EnsemblProtists:DDB0185211 GeneID:8618433 KEGG:ddi:DDB_G0272120
InParanoid:Q75JS8 OMA:ERTIVAH Uniprot:Q75JS8
Length = 844
Score = 111 (44.1 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 36/115 (31%), Positives = 57/115 (49%)
Query: 192 ESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKS 251
++V +TF +A E K EIME + F S Y+K G +G +L GPPGTGK+
Sbjct: 343 KAVKATSTTTFKDVAGMDEAKEEIMEFVS-FLKDPSRYKKLGARIPKGAILSGPPGTGKT 401
Query: 252 SMIAAMANYLGYDIYDL---ELTEVH---NNSELRKLLMKTSSKS--IIVIEDID 298
+ A A G + Y + + E+ S +R L + + + I+ I++ID
Sbjct: 402 LLAKATAGEAGVNFYTISGSDFIEMFVGVGPSRVRDLFKEARANTPCIVFIDEID 456
Score = 83 (34.3 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 26/61 (42%), Positives = 32/61 (52%)
Query: 335 SVGG-EDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHIF 392
S GG + TL+ LL DG S G + VF TN + LDPALLR GR D I+
Sbjct: 463 SRGGFHNDERENTLNQLLVEMDGFSSTSG---VVVFAGTNRSDVLDPALLRPGRFDRQIY 519
Query: 393 M 393
+
Sbjct: 520 V 520
>TIGR_CMR|CJE_1259 [details] [associations]
symbol:CJE_1259 "cell division protein FtsH"
species:195099 "Campylobacter jejuni RM1221" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
OMA:RARASMP RefSeq:YP_179247.1 ProteinModelPortal:Q5HTY8 SMR:Q5HTY8
STRING:Q5HTY8 GeneID:3231766 KEGG:cjr:CJE1259 PATRIC:20044314
ProtClustDB:CLSK872348 BioCyc:CJEJ195099:GJC0-1285-MONOMER
Uniprot:Q5HTY8
Length = 645
Score = 97 (39.2 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 37/127 (29%), Positives = 57/127 (44%)
Query: 181 GGSLDSRGHPWESVSFKHPST-FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRG 239
G S+ G + V+ + P F +A E K E+ E + DF Y K G +G
Sbjct: 155 GSSILGIGSSKKLVNSEKPKVKFSDVAGVEEAKEEVKE-IVDFLKYPERYIKLGAKIPKG 213
Query: 240 YLLYGPPGTGKSSMIAAMANYLGYDIYD------LELTEVHNNSELRKLL--MKTSSKSI 291
LL GPPGTGK+ + A+A + +E+ S +R L K + +I
Sbjct: 214 LLLVGPPGTGKTLLAKAVAGEADVPFFSVSGSSFIEMFVGVGASRVRDLFENAKKEAPAI 273
Query: 292 IVIEDID 298
+ I++ID
Sbjct: 274 VFIDEID 280
Score = 95 (38.5 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 43/158 (27%), Positives = 64/158 (40%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R SG +GG D TL+ LL DG + S I + TN E LD ALLR GR D
Sbjct: 286 RAASGMMGGNDEREQ-TLNQLLAEMDG-FGTESSPVIVLAATNRPEVLDAALLRPGRFDR 343
Query: 390 HIFMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADI-SEVLIKNKRD 448
+ + + +LK ++ G A A+I +E + RD
Sbjct: 344 QVLVDKPDFKGRCDILKVHMKDVKISPKVKVEDIARLTAGLAGADLANIINEAALLAGRD 403
Query: 449 KCKAVRELLETLKVKAEKNVKHGGIIVKNSDYEEEEQE 486
K V + L E+ + G+ K+ E+E++
Sbjct: 404 SKKYVEQ--NDLVEAVERAI--AGLEKKSRRINEKEKK 437
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 107 (42.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 44/146 (30%), Positives = 69/146 (47%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L ++ DSR E V K ++ + EK+I E++E +
Sbjct: 130 KPGDLVGVNKDSYLILDTLPSEYDSRVKAME-VDEKPTEDYNDIG-GLEKQIQELVEAIV 187
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMI---AAMANYLGYDIYDLELTE--VHN 275
++K G +G LLYGPPGTGK+ M AA N + +L + + +
Sbjct: 188 LPMTHKEQFEKLGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 247
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + LL K S II I++ID
Sbjct: 248 GAKLVRDAFLLAKEKSPCIIFIDEID 273
Score = 79 (32.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG S ++I V TN + LDPAL+RSGR+D I
Sbjct: 293 TMLELLNQLDGFSS---DDRIKVIAATNRADILDPALMRSGRLDRKI 336
>UNIPROTKB|P37476 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0008233 "peptidase activity" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IDA] [GO:0030428 "cell septum"
evidence=IDA] [GO:0043934 "sporulation" evidence=IMP]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0006950 GO:GO:0051301 GO:GO:0046872
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0007049
GO:GO:0030163 EMBL:AL009126 GenomeReviews:AL009126_GR GO:GO:0043934
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 GO:GO:0008233
GO:GO:0030428 EMBL:D26185 HOGENOM:HOG000217276 KO:K03798 PIR:E69627
RefSeq:NP_387950.1 ProteinModelPortal:P37476 SMR:P37476
IntAct:P37476 MEROPS:M41.009 EnsemblBacteria:EBBACT00000001428
GeneID:938094 KEGG:bsu:BSU00690 PATRIC:18971613 GenoList:BSU00690
OMA:ENMSYST ProtClustDB:CLSK886567 BioCyc:BSUB:BSU00690-MONOMER
Uniprot:P37476
Length = 637
Score = 95 (38.5 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 32/106 (30%), Positives = 51/106 (48%)
Query: 203 DTLAIDPEKK--IEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
D D EK+ +E++E LKD + + G +G LL GPPGTGK+ + A A
Sbjct: 162 DVAGADEEKQELVEVVEFLKDPRK----FAELGARIPKGVLLVGPPGTGKTLLAKACAGE 217
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
G + + + E+ S +R L K ++ +I I++ID
Sbjct: 218 AGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCLIFIDEID 263
Score = 87 (35.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 26/60 (43%), Positives = 31/60 (51%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG + G I + TN + LDPALLR GR D I
Sbjct: 270 GAGLGGGHDEREQ-TLNQLLVEMDGFSANEGI--IIIAATNRADILDPALLRPGRFDRQI 326
Score = 50 (22.7 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 440 EVLIKNKRDKCKAVRELL---ETLKVKAEKN-VKHGGIIVKN-SDYEEEEQEK 487
++L +N RDK + + + L ETL + K+ + HG + +N SD E+ + K
Sbjct: 570 QILTEN-RDKLELIAQTLLKVETLDAEQIKHLIDHGTLPERNFSDDEKNDDVK 621
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 96 (38.9 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 35/126 (27%), Positives = 65/126 (51%)
Query: 184 LDSRGHPWESVSF--KHP-STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGY 240
L+++ P S+ K P ST+D + ++ EI E ++ ++ G A +G
Sbjct: 126 LENKADPLVSLMMVEKVPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGV 185
Query: 241 LLYGPPGTGKSSMIAAMANYLGYD---IYDLELTE--VHNNSEL-RKLLM--KTSSKSII 292
+LYGPPGTGK+ + A+A++ + EL + + S + R+L + + + SII
Sbjct: 186 ILYGPPGTGKTLLARAVAHHTDCKFIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSII 245
Query: 293 VIEDID 298
+++ID
Sbjct: 246 FMDEID 251
Score = 90 (36.7 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
GS GG D T+ LLN DG + + KI + TN ++ LDPALLR GR+D I
Sbjct: 260 GS-GGGDSEVQRTMLELLNQLDG-FETSKNIKI-IMATNRLDILDPALLRPGRIDRKI 314
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 100 (40.3 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 33/108 (30%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST+D + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 129 STYDMIGGLDQQIK-EIKEVIELGLKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 187
Query: 259 NYLG---YDIYDLELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + S + R+L + + + SII +++ID
Sbjct: 188 HHTDCRFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 235
Score = 85 (35.0 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 335 SVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
S G D T+ LLN DG + + KI + TN ++ LDPALLR GR+D I
Sbjct: 244 SAGSGDSEVQRTMLELLNQLDG-FEPTKNIKI-IMATNRLDILDPALLRPGRIDRKI 298
>TAIR|locus:2174819 [details] [associations]
symbol:EMB3144 "EMBRYO DEFECTIVE 3144" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005886 "plasma membrane" evidence=ISM] [GO:0006508
"proteolysis" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0006364 "rRNA processing"
evidence=RCA] [GO:0006399 "tRNA metabolic process" evidence=RCA]
[GO:0009658 "chloroplast organization" evidence=RCA] [GO:0016556
"mRNA modification" evidence=RCA] [GO:0009536 "plastid"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 GO:GO:0009790
GO:GO:0017111 IPI:IPI00527762 RefSeq:NP_201263.2 UniGene:At.28951
ProteinModelPortal:F4KF14 SMR:F4KF14 PRIDE:F4KF14
EnsemblPlants:AT5G64580.1 GeneID:836579 KEGG:ath:AT5G64580
OMA:LCWISAK Uniprot:F4KF14
Length = 855
Score = 104 (41.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 39/125 (31%), Positives = 56/125 (44%)
Query: 182 GSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYL 241
GSL + S K TFD A K E+ E ++ N F K G +G L
Sbjct: 295 GSLGKSRAKFISAEEKTGVTFDDFAGQEYIKRELQEIVRILKNDEEFQNK-GIYCPKGVL 353
Query: 242 LYGPPGTGKSSMIAAMANYLGYDIY---DLELTEVHNN---SELRKLLMKTSS--KSIIV 293
L+GPPGTGK+ + A+A G + + E+ S ++ L + S SII
Sbjct: 354 LHGPPGTGKTLLAKAIAGEAGLPFFAANGTDFVEMFVGVAASRVKDLFASSRSYAPSIIF 413
Query: 294 IEDID 298
I++ID
Sbjct: 414 IDEID 418
Score = 89 (36.4 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 39/137 (28%), Positives = 53/137 (38%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G +GG L +L DG + S+ + + TN ++ LDPALLR GR D I
Sbjct: 425 GGPDIGGGGAEREQGLLQILTEMDG-FKVTTSQVLVIGATNRLDILDPALLRKGRFDKII 483
Query: 392 FMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAE-MTPADISEVL----IKNK 446
+ S L +LK + V E T A++ VL I
Sbjct: 484 RVGLPSKDGRLAILKVHARNKFFRSEDEKEELLQEVAENTEDFTGAELQNVLNEAGILTA 543
Query: 447 RDKCKAV--RELLETLK 461
R + ELLE LK
Sbjct: 544 RKDLDYIGREELLEALK 560
>TIGR_CMR|BA_0064 [details] [associations]
symbol:BA_0064 "cell division protein FtsH" species:198094
"Bacillus anthracis str. Ames" [GO:0000910 "cytokinesis"
evidence=ISS] [GO:0004222 "metalloendopeptidase activity"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0051301 GO:GO:0046872
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0030163 HOGENOM:HOG000217277 TIGRFAMs:TIGR01241 KO:K03798
ProtClustDB:CLSK886567 HSSP:Q9LCZ4 OMA:QINMEEV RefSeq:NP_842633.1
RefSeq:YP_016667.1 RefSeq:YP_026351.1 ProteinModelPortal:Q81VX5
SMR:Q81VX5 IntAct:Q81VX5 DNASU:1086600
EnsemblBacteria:EBBACT00000009752 EnsemblBacteria:EBBACT00000016661
EnsemblBacteria:EBBACT00000022411 GeneID:1086600 GeneID:2819677
GeneID:2851579 KEGG:ban:BA_0064 KEGG:bar:GBAA_0064 KEGG:bat:BAS0064
BioCyc:BANT260799:GJAJ-73-MONOMER BioCyc:BANT261594:GJ7F-75-MONOMER
Uniprot:Q81VX5
Length = 633
Score = 100 (40.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 33/106 (31%), Positives = 52/106 (49%)
Query: 203 DTLAIDPEKK--IEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
D D EK+ +E++E LKD + + G +G LL GPPGTGK+ + A+A
Sbjct: 163 DVAGADEEKQELVEVVEFLKDPRK----FAEVGARIPKGVLLVGPPGTGKTLLARAVAGE 218
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
G + + + E+ S +R L K ++ II I++ID
Sbjct: 219 AGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEID 264
Score = 86 (35.3 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 26/60 (43%), Positives = 31/60 (51%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG + G I + TN + LDPALLR GR D I
Sbjct: 271 GAGLGGGHDEREQ-TLNQLLVEMDGFGANEGI--IIIAATNRPDILDPALLRPGRFDRQI 327
Score = 44 (20.5 bits), Expect = 2.1e-06, Sum P(3) = 2.1e-06
Identities = 22/81 (27%), Positives = 37/81 (45%)
Query: 436 ADISEVLIKNKRDKCKAV-RELLETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRALESPI 494
A ++L N RDK + + LLE + AE+ + H DY R E P
Sbjct: 567 ARAKQILTDN-RDKLDLIAKTLLEVETLDAEQ-INH------LCDYG------RLPERPT 612
Query: 495 EGSDIEDANNCEEGDDDHEEK 515
+D++ N ++ D++ E+K
Sbjct: 613 SSADVKVNINMKKDDEESEDK 633
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 93 (37.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 332 GSGSVGGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
GS + GE G++ + T+ LLN DG S + K+ + TN I+ LD ALLR GR+D
Sbjct: 285 GSQRIEGEHGDSEVQRTMMELLNQLDGFEST-QNIKV-IMCTNRIDILDEALLRPGRIDR 342
Query: 390 HIFMSYCSYPALLILLK 406
I + A + +LK
Sbjct: 343 KIEFPNPNVEARMEILK 359
Score = 92 (37.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 30/108 (27%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K E+ E ++ ++ G + +G LLYGPPGTGK+ + A+A
Sbjct: 176 STYEMVGGLDQQVK-EVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + S + R+L + + + SII +++ID
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 282
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 93 (37.8 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 29/77 (37%), Positives = 42/77 (54%)
Query: 332 GSGSVGGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
GS + GE G++ + T+ LLN DG S + K+ + TN I+ LD ALLR GR+D
Sbjct: 285 GSQRIEGEHGDSEVQRTMMELLNQLDGFEST-QNIKV-IMCTNRIDILDEALLRPGRIDR 342
Query: 390 HIFMSYCSYPALLILLK 406
I + A + +LK
Sbjct: 343 KIEFPNPNVEARMEILK 359
Score = 92 (37.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 30/108 (27%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K E+ E ++ ++ G + +G LLYGPPGTGK+ + A+A
Sbjct: 176 STYEMVGGLDQQVK-EVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARAVA 234
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + S + R+L + + + SII +++ID
Sbjct: 235 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 282
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 100 (40.3 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEK--IFVFTTNHIEKLDPALLRSGRMDM 389
GS S+G G ++ LL DG+ G +K F+ TN E LD ALLR GR+D
Sbjct: 590 GS-SLGDGSGAGDRVMNQLLTEIDGV----GPKKNLFFIGATNRPELLDEALLRPGRLDQ 644
Query: 390 HIFMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDK 449
I++ A + +L L G + AD++E+ + R
Sbjct: 645 LIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAG---FSGADLAELCQRAAR-- 699
Query: 450 CKAVRELLETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRALESPIEGSDIEDANNCEEGD 509
A+R+ ++ AE+ K + + N E E+ E E+ + + AN+ ++ D
Sbjct: 700 -AAIRDAID-----AEEMNKKSKLELSNKK-ENEQNETN--ENDVHNKTEQQANDQQKND 750
Query: 510 DDH 512
DD+
Sbjct: 751 DDN 753
Score = 89 (36.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNN------SELRKLLMKT--SSK 289
RG LLYGPPG+GK+ + A+AN G + + EV + + LR+ + +S
Sbjct: 242 RGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSP 301
Query: 290 SIIVIEDID 298
+II I++ID
Sbjct: 302 AIIFIDEID 310
Score = 76 (31.8 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
++K G + RG L YGPPG GK+ + A+A+
Sbjct: 506 FEKFGMSPSRGVLFYGPPGCGKTLLAKAVAS 536
Score = 44 (20.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 159 IMEKANDIRRKNQDRL--LYTNSRGGSLDSRGHPWESVSF--KHPSTFDTLAIDPEKKI 213
I + + I+R ++++L + + GG E + +HP F TL + P + +
Sbjct: 186 IYYEGDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGV 244
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 100 (40.3 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 48/183 (26%), Positives = 79/183 (43%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEK--IFVFTTNHIEKLDPALLRSGRMDM 389
GS S+G G ++ LL DG+ G +K F+ TN E LD ALLR GR+D
Sbjct: 590 GS-SLGDGSGAGDRVMNQLLTEIDGV----GPKKNLFFIGATNRPELLDEALLRPGRLDQ 644
Query: 390 HIFMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDK 449
I++ A + +L L G + AD++E+ + R
Sbjct: 645 LIYIPLPDLGARISILTAILRKCPVAENVPIDFLAQKTAG---FSGADLAELCQRAAR-- 699
Query: 450 CKAVRELLETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRALESPIEGSDIEDANNCEEGD 509
A+R+ ++ AE+ K + + N E E+ E E+ + + AN+ ++ D
Sbjct: 700 -AAIRDAID-----AEEMNKKSKLELSNKK-ENEQNETN--ENDVHNKTEQQANDQQKND 750
Query: 510 DDH 512
DD+
Sbjct: 751 DDN 753
Score = 89 (36.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNN------SELRKLLMKT--SSK 289
RG LLYGPPG+GK+ + A+AN G + + EV + + LR+ + +S
Sbjct: 242 RGVLLYGPPGSGKTCIARAVANETGAFFFLINGPEVMSKMAGEAEANLRRAFEEAEKNSP 301
Query: 290 SIIVIEDID 298
+II I++ID
Sbjct: 302 AIIFIDEID 310
Score = 76 (31.8 bits), Expect = 5.3e-05, Sum P(3) = 5.3e-05
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
++K G + RG L YGPPG GK+ + A+A+
Sbjct: 506 FEKFGMSPSRGVLFYGPPGCGKTLLAKAVAS 536
Score = 44 (20.5 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 13/59 (22%), Positives = 27/59 (45%)
Query: 159 IMEKANDIRRKNQDRL--LYTNSRGGSLDSRGHPWESVSF--KHPSTFDTLAIDPEKKI 213
I + + I+R ++++L + + GG E + +HP F TL + P + +
Sbjct: 186 IYYEGDPIKRDDEEKLDEIGYDDIGGCKKQLAQIREMIELPLRHPGLFKTLGVKPPRGV 244
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 99 (39.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 33/108 (30%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST+D + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 158 STYDMIGGLDQQIK-EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + S + R+L + + + SII +++ID
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
Score = 85 (35.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 29/63 (46%), Positives = 33/63 (52%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMD 388
R SGS G D T+ LLN DG + S KI V TN I+ LD ALLR GR+D
Sbjct: 270 RMESGS-GNGDSEVQRTMLELLNQLDGFEA---SNKIKVLMATNRIDILDQALLRPGRID 325
Query: 389 MHI 391
I
Sbjct: 326 RKI 328
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 99 (39.9 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 33/108 (30%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST+D + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 158 STYDMIGGLDQQIK-EIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 216
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + S + R+L + + + SII +++ID
Sbjct: 217 HHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 264
Score = 85 (35.0 bits), Expect = 2.7e-06, Sum P(2) = 2.7e-06
Identities = 29/63 (46%), Positives = 33/63 (52%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMD 388
R SGS G D T+ LLN DG + S KI V TN I+ LD ALLR GR+D
Sbjct: 270 RMESGS-GNGDSEVQRTMLELLNQLDGFEA---SNKIKVLMATNRIDILDQALLRPGRID 325
Query: 389 MHI 391
I
Sbjct: 326 RKI 328
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 91 (37.1 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
+G LLYGPPG GK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 237 KGILLYGPPGCGKTMIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 296
Query: 290 SIIVIEDID 298
SII I++ID
Sbjct: 297 SIIFIDEID 305
Score = 88 (36.0 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 33/131 (25%), Positives = 57/131 (43%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMD 388
R S G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D
Sbjct: 582 RSRGSSQGDAGGAGDRVINQILTEMDGMNA---KKNVFIIGATNRPDIIDPAILRPGRLD 638
Query: 389 MHIFMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRD 448
I++ P+ + +LK L G + AD++E+ +
Sbjct: 639 QLIYIPLPDLPSRVAILKACLNKSPVAKDVDLEFLGQKTQG---FSGADLTEICQR---- 691
Query: 449 KCK-AVRELLE 458
CK A+RE +E
Sbjct: 692 ACKLAIRESIE 702
Score = 75 (31.5 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
++K G +G L YGPPG GK+ + A+AN
Sbjct: 501 FRKFGMQPSKGVLFYGPPGCGKTLLAKAIAN 531
Score = 66 (28.3 bits), Expect = 0.00041, Sum P(3) = 0.00041
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 347 LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
+S LL DGL S + I + TN +DPAL R GR D I
Sbjct: 323 VSQLLTLMDGLKS--RAHVIVMGATNRPNSIDPALRRFGRFDREI 365
Score = 54 (24.1 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 158 FIMEKANDIRRKNQDRL--LYTNSRGGSLDSRGHPWESVSF--KHPSTFDTLAIDPEKKI 213
FI + ++R+++DRL + + GG G E V +HP F + + P K I
Sbjct: 180 FIHCEGEAVKREDEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGI 239
>TAIR|locus:2011952 [details] [associations]
symbol:FTSH1 "FTSH protease 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0031977
"thylakoid lumen" evidence=IDA] [GO:0010206 "photosystem II repair"
evidence=TAS] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0006098 "pentose-phosphate shunt" evidence=RCA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0007275
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 eggNOG:COG0465
TIGRFAMs:TIGR01241 GO:GO:0009535 GO:GO:0031977 GO:GO:0004176
GO:GO:0010206 EMBL:AC007980 EMBL:X99808 EMBL:AY091095 EMBL:AY123034
EMBL:Y12780 IPI:IPI00518805 PIR:G96538 RefSeq:NP_564563.1
UniGene:At.21777 ProteinModelPortal:Q39102 SMR:Q39102 STRING:Q39102
MEROPS:M41.020 PaxDb:Q39102 PRIDE:Q39102 EnsemblPlants:AT1G50250.1
GeneID:841447 KEGG:ath:AT1G50250 GeneFarm:2667 TAIR:At1g50250
HOGENOM:HOG000217276 InParanoid:Q39102 KO:K03798 OMA:GGNPAMN
PhylomeDB:Q39102 ProtClustDB:CLSN2688633 Genevestigator:Q39102
GermOnline:AT1G50250 GO:GO:0010304 Uniprot:Q39102
Length = 716
Score = 110 (43.8 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 181 GGSLD-SRGHP-WESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKR 238
GG +D R ++ V S D D + K+E+ E + DF Y G +
Sbjct: 239 GGPMDFGRSKSKFQEVPETGVSFADVAGAD-QAKLELQE-VVDFLKNPDKYTALGAKIPK 296
Query: 239 GYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTEVH---NNSELRKLLMKTSSKS-- 290
G LL GPPGTGK+ + A+A G + E E+ S +R L K SK+
Sbjct: 297 GCLLVGPPGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPC 356
Query: 291 IIVIEDID 298
I+ I++ID
Sbjct: 357 IVFIDEID 364
Score = 79 (32.9 bits), Expect = 2.9e-06, Sum P(2) = 2.9e-06
Identities = 23/61 (37%), Positives = 30/61 (49%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G GG D T++ LL DG G+ + V TN + LD ALLR GR D
Sbjct: 371 GAGMGGGNDEREQ-TINQLLTEMDGF---SGNSGVIVLAATNRPDVLDSALLRPGRFDRQ 426
Query: 391 I 391
+
Sbjct: 427 V 427
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 104 (41.7 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD +A E K + ME + +F + G +G LL GPPGTGK+ + A+A
Sbjct: 225 TFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLLMKTSSKS--IIVIEDID 298
G + + E E+ S +R L K + I+ +++ID
Sbjct: 284 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 329
Score = 85 (35.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 28/79 (35%), Positives = 35/79 (44%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG G I V TN + LD ALLR GR D +
Sbjct: 336 GTGIGGGNDEREQ-TLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFDRQV 392
Query: 392 FMSYCSYPALLILLKNYLG 410
+ +LK + G
Sbjct: 393 SVDVPDVKGRTDILKVHAG 411
>TIGR_CMR|CBU_1352 [details] [associations]
symbol:CBU_1352 "ATP-dependent metalloprotease FtsH"
species:227377 "Coxiella burnetii RSA 493" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0051301 GO:GO:0046872 GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0030163
TIGRFAMs:TIGR01241 HSSP:P28691 HOGENOM:HOG000217276 KO:K03798
MEROPS:M41.001 OMA:RSIIDQC RefSeq:NP_820341.1
ProteinModelPortal:Q83BY5 SMR:Q83BY5 PRIDE:Q83BY5 GeneID:1209258
KEGG:cbu:CBU_1352 PATRIC:17931447 ProtClustDB:CLSK914722
BioCyc:CBUR227377:GJ7S-1342-MONOMER Uniprot:Q83BY5
Length = 647
Score = 97 (39.2 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD +A E K E+ E L +F +Q+ G G LL GPPGTGK+ + A+A
Sbjct: 154 TFDDVAGVDEAKEEVKE-LVEFLRDPGKFQRLGGKMPCGVLLVGPPGTGKTLLAKAVAGE 212
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
+ + + E+ S +R + K + II I++ID
Sbjct: 213 AKVPFFTISGSDFVEMFVGVGASRVRDMFDQAKKQAPCIIFIDEID 258
Score = 88 (36.0 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 27/61 (44%), Positives = 31/61 (50%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G GG D TL+ LL DG G E I V TN + LDPALLR GR D
Sbjct: 265 GAGLGGGHDEREQ-TLNQLLVEMDGFE---GKEGIIVMAATNRPDVLDPALLRPGRFDRQ 320
Query: 391 I 391
+
Sbjct: 321 V 321
Score = 44 (20.5 bits), Expect = 3.1e-06, Sum P(3) = 3.1e-06
Identities = 12/27 (44%), Positives = 13/27 (48%)
Query: 480 YEEEEQEKRALESPIEGSDIEDANNCE 506
Y EEE E S + DI DA N E
Sbjct: 522 YREEEGEVFLGRSVTQRKDISDATNKE 548
>WB|WBGene00015688 [details] [associations]
symbol:C10G11.8 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 HSSP:Q9LCZ4 EMBL:FO080499 PIR:D87802
RefSeq:NP_491811.1 ProteinModelPortal:P91025 SMR:P91025
STRING:P91025 PaxDb:P91025 EnsemblMetazoa:C10G11.8 GeneID:172324
KEGG:cel:CELE_C10G11.8 UCSC:C10G11.8 CTD:172324 WormBase:C10G11.8
InParanoid:P91025 OMA:RGIENAN NextBio:875027 Uniprot:P91025
Length = 438
Score = 93 (37.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 36/124 (29%), Positives = 62/124 (50%)
Query: 185 DSRGHPWESVSFKHPS-TFDTLAIDPEKKI-EIMEDLKDFANGMSFYQKTGRAWKRGYLL 242
++ GH E K P TFD + E +I E+ E ++ +Y++ G +G +L
Sbjct: 168 NAMGHKVE----KTPKETFDDIG-GCESQIQELKESVELPLTHPEYYEEMGITAPKGVIL 222
Query: 243 YGPPGTGKSSMIAAMAN-----YLGYDIYDLELTEVHNNSEL-RKL--LMKTSSKSIIVI 294
YG PGTGK+ + A+AN ++ DL + + L R++ + K + SI+ I
Sbjct: 223 YGEPGTGKTLLAKAVANSTSATFIRATGSDLVQKQSGEGARLVRQIFQMAKEQAPSIVFI 282
Query: 295 EDID 298
++ID
Sbjct: 283 DEID 286
Score = 91 (37.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
TL LLN DG S G KI + TN I+ LDPAL+R GR+D I
Sbjct: 306 TLLELLNQLDGFESR-GDVKI-IMATNRIDSLDPALIRPGRIDRKI 349
>TAIR|locus:2009235 [details] [associations]
symbol:FTSH8 "FTSH protease 8" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA;IDA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009507 "chloroplast"
evidence=IDA] [GO:0009535 "chloroplast thylakoid membrane"
evidence=IDA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=TAS] [GO:0009579 "thylakoid"
evidence=IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AC007592
eggNOG:COG0465 TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535
GO:GO:0004176 HOGENOM:HOG000217276 KO:K03798 GO:GO:0010304
ProtClustDB:CLSN2679937 EMBL:AF419565 EMBL:BT002649 EMBL:BT003813
EMBL:AY045951 IPI:IPI00539195 RefSeq:NP_563766.3 UniGene:At.17054
ProteinModelPortal:Q8W585 SMR:Q8W585 STRING:Q8W585 MEROPS:M41.025
PaxDb:Q8W585 PRIDE:Q8W585 ProMEX:Q8W585 EnsemblPlants:AT1G06430.1
GeneID:837154 KEGG:ath:AT1G06430 GeneFarm:2474 TAIR:At1g06430
InParanoid:Q8W585 OMA:NANADEQ PhylomeDB:Q8W585
Genevestigator:Q8W585 Uniprot:Q8W585
Length = 685
Score = 104 (41.7 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 32/106 (30%), Positives = 50/106 (47%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD +A E K + ME + +F + G +G LL GPPGTGK+ + A+A
Sbjct: 218 TFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 276
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLLMKTSSKS--IIVIEDID 298
G + + E E+ S +R L K + I+ +++ID
Sbjct: 277 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 322
Score = 84 (34.6 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 28/79 (35%), Positives = 35/79 (44%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG G I V TN + LD ALLR GR D +
Sbjct: 329 GTGIGGGNDEREQ-TLNQLLTEMDGFEGNTGV--IVVAATNRADILDSALLRPGRFDRQV 385
Query: 392 FMSYCSYPALLILLKNYLG 410
+ +LK + G
Sbjct: 386 SVDVPDVKGRTDILKVHSG 404
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 96 (38.9 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 35/150 (23%), Positives = 66/150 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 590 GGAGDAGGAADRVINQILTEMDGMTN---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 646
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ P+ +L+ L G + AD++E+ + CK
Sbjct: 647 IPLPDMPSRTAILRANLRKSPVAKDVDLMYLSKITEG---FSGADLTEICQR----ACKL 699
Query: 452 AVRELLETLKVKAEKNVKHGGIIVKNSDYE 481
A+RE +E +++AE+ + + DY+
Sbjct: 700 AIREAIEA-EIRAERQRQARKETAMDDDYD 728
Score = 94 (38.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 241 RGILLYGPPGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 300
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 301 AIIFIDELD 309
Score = 80 (33.2 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 23/66 (34%), Positives = 32/66 (48%)
Query: 194 VSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSM 253
V H + D +D E K E+ E ++ + K G RG L YGPPG GK+ +
Sbjct: 471 VEVPHVNWEDIGGLD-EVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLL 529
Query: 254 IAAMAN 259
A+AN
Sbjct: 530 AKAIAN 535
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 101 (40.6 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG L+YGPPGTGK+ M A+AN G + + E+ + S LRK + +S
Sbjct: 260 RGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP 319
Query: 290 SIIVIEDID 298
+II I++ID
Sbjct: 320 AIIFIDEID 328
Score = 99 (39.9 bits), Expect = 6.8e-06, Sum P(3) = 6.8e-06
Identities = 26/97 (26%), Positives = 51/97 (52%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLE 269
E K E++E ++ + +QK G + RG L YGPPGTGK+ + A+AN + ++
Sbjct: 506 EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 565
Query: 270 LTEV------HNNSELRKLLMKTSSKS--IIVIEDID 298
E+ + S +R + K + + ++ ++++D
Sbjct: 566 GPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELD 602
Score = 93 (37.8 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 41/152 (26%), Positives = 66/152 (43%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
GSVG G + ++ LL DG+ S + +FV TN E+LD AL+R GR+D ++
Sbjct: 610 GSVGDAGGASDRVVNQLLTEMDGMTS---KKNVFVIGATNRPEQLDAALVRPGRLDTLVY 666
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKA 452
+ + +LK L G + AD+ V +R A
Sbjct: 667 VPLPDQASREGILKAQLRKTPVASDVDIEFIASKTHG---FSGADLGFV---TQRAVKLA 720
Query: 453 VRELLETLKVKAEKNVKHGGIIVKNSDYEEEE 484
++E + +++ +K + G VK D EE E
Sbjct: 721 IKESISA-EIERQKQREAAGEDVKMEDEEEGE 751
Score = 37 (18.1 bits), Expect = 4.2e-06, Sum P(3) = 4.2e-06
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 197 KHPSTFDTLAIDPEKKI 213
+HP F ++ I P + I
Sbjct: 246 RHPQLFKSIGIKPPRGI 262
>TIGR_CMR|DET_0391 [details] [associations]
symbol:DET_0391 "ATP-dependent metalloprotease FtsH"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000027 GenomeReviews:CP000027_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:LEIIAMR MEROPS:M41.021
RefSeq:YP_181136.1 ProteinModelPortal:Q3Z9G3 SMR:Q3Z9G3
STRING:Q3Z9G3 GeneID:3230280 KEGG:det:DET0391 PATRIC:21607849
ProtClustDB:CLSK837509 BioCyc:DETH243164:GJNF-391-MONOMER
Uniprot:Q3Z9G3
Length = 608
Score = 104 (41.7 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 40/136 (29%), Positives = 64/136 (47%)
Query: 175 LYTNSRGGSLD--SRGHPWESV-SFKHPS-TFDTLAIDPEKKIEIMEDLKDFANGMSFYQ 230
++T +RG + S G + + P+ TF +A E K E+ E + +F +Q
Sbjct: 127 IFTQARGANNQAVSFGRSKAKLFNMDKPTITFANVAGVDEAKQEVGE-VVEFLKSREKFQ 185
Query: 231 KTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTEVH---NNSELRKLL- 283
G +G LL GPPGTGK+ + A+A G + + E E+ S +R L
Sbjct: 186 ALGARIPKGILLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFD 245
Query: 284 -MKTSSKSIIVIEDID 298
K ++ II I++ID
Sbjct: 246 QAKKNAPCIIFIDEID 261
Score = 82 (33.9 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ +L DG + + I + TN + LDPALLR GR D +
Sbjct: 268 GAGLGGGHDEREQ-TLNQILVEMDGFDT--DTSVIVIAATNRPDILDPALLRPGRFDRRV 324
Query: 392 FM 393
+
Sbjct: 325 VL 326
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 91 (37.1 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 123 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 182
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 183 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 215
Score = 90 (36.7 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 221 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 276
Query: 390 HI 391
I
Sbjct: 277 KI 278
>ASPGD|ASPL0000072959 [details] [associations]
symbol:AN4557 species:162425 "Emericella nidulans"
[GO:0097002 "mitochondrial inner boundary membrane" evidence=IEA]
[GO:0005745 "m-AAA complex" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0006461 "protein
complex assembly" evidence=IEA] [GO:0006465 "signal peptide
processing" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 HOGENOM:HOG000217277 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:LYRFVTT MEROPS:M41.002 OrthoDB:EOG4J14HG
EMBL:BN001303 EMBL:AACD01000078 RefSeq:XP_662161.1
ProteinModelPortal:Q5B4H3 SMR:Q5B4H3 STRING:Q5B4H3
EnsemblFungi:CADANIAT00005881 GeneID:2872358 KEGG:ani:AN4557.2
Uniprot:Q5B4H3
Length = 883
Score = 109 (43.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 35/104 (33%), Positives = 51/104 (49%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLG 262
D +D E K+EIME + F +QK G RG +L GPPGTGK+ + A A G
Sbjct: 403 DVAGMD-EAKVEIMEFVS-FLKSPERFQKLGAKIPRGAILSGPPGTGKTLLAKATAGESG 460
Query: 263 YDIYDL---ELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
+ + E E+ S +R L + ++ II I++ID
Sbjct: 461 VPFFSVSGSEFVEMFVGVGPSRVRDLFANARKNTPCIIFIDEID 504
Score = 80 (33.2 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 337 GGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHI 391
GG D S TL+ +L DG + S+++ V TN + LD AL+R GR D HI
Sbjct: 517 GGNDERES-TLNQILTEMDGFNT---SDQVVVLAGTNRPDVLDKALMRPGRFDRHI 568
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 99 (39.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 44/182 (24%), Positives = 79/182 (43%)
Query: 129 WRPLPEEKRGFTLRIKKKDKSLI---LDSYLDFIMEKANDIRRKNQDRLLYTNSRGGSLD 185
+R + +EKRG + IK + I + +D K D+ N+D L + D
Sbjct: 110 FRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYD 169
Query: 186 SRGHPWESVSFKHPSTFDTLAIDPEKKIE-IMEDLKDFANGMSFYQKTGRAWKRGYLLYG 244
+R E + D +D K+IE ++E + ++K G +G L++G
Sbjct: 170 NRVKAMEVIEKPSEDYSDIGGLD--KQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHG 227
Query: 245 PPGTGKSSMIAAMANYLGYDIYDL---ELTEVHNNSELRKL-----LMKTSSKSIIVIED 296
PPGTGK+ + A A+ L +L ++ + + L K + +II I++
Sbjct: 228 PPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDE 287
Query: 297 ID 298
+D
Sbjct: 288 LD 289
Score = 83 (34.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG +S + K+ + TN + LDPALLRSGR+D I
Sbjct: 309 TMLELLNQLDG-FSTDDTVKV-IAATNRPDTLDPALLRSGRLDRKI 352
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 99 (39.9 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 44/182 (24%), Positives = 79/182 (43%)
Query: 129 WRPLPEEKRGFTLRIKKKDKSLI---LDSYLDFIMEKANDIRRKNQDRLLYTNSRGGSLD 185
+R + +EKRG + IK + I + +D K D+ N+D L + D
Sbjct: 110 FRDIDDEKRGKCMVIKTSTRQTIFLPVPGLIDASELKPGDLVGVNKDSYLIIDKLPQEYD 169
Query: 186 SRGHPWESVSFKHPSTFDTLAIDPEKKIE-IMEDLKDFANGMSFYQKTGRAWKRGYLLYG 244
+R E + D +D K+IE ++E + ++K G +G L++G
Sbjct: 170 NRVKAMEVIEKPSEDYSDIGGLD--KQIEDLVEAIVLPMLHKEKFEKIGIKPPKGVLMHG 227
Query: 245 PPGTGKSSMIAAMANYLGYDIYDL---ELTEVHNNSELRKL-----LMKTSSKSIIVIED 296
PPGTGK+ + A A+ L +L ++ + + L K + +II I++
Sbjct: 228 PPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNLAKEKAPAIIFIDE 287
Query: 297 ID 298
+D
Sbjct: 288 LD 289
Score = 83 (34.3 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 22/46 (47%), Positives = 29/46 (63%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG +S + K+ + TN + LDPALLRSGR+D I
Sbjct: 309 TMLELLNQLDG-FSTDDTVKV-IAATNRPDTLDPALLRSGRLDRKI 352
>CGD|CAL0000075 [details] [associations]
symbol:AFG3 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005745 "m-AAA complex"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 103 (41.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 37/105 (35%), Positives = 51/105 (48%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLG 262
D D E K EIME +K F Y+K G RG +L GPPGTGK+ + A A G
Sbjct: 288 DVAGCD-ESKEEIMEFVK-FLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAG 345
Query: 263 YDIYDL---ELTEVH---NNSELRKLLMKTSSK---SIIVIEDID 298
+ E E+ S +R L KT+ + +II +++ID
Sbjct: 346 VPFLSVSGSEFVEMFVGVGASRVRDLF-KTAREMAPAIIFVDEID 389
Score = 85 (35.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G +GG D + TL+ LL DG + ++ + V TN + LD ALLR GR D H
Sbjct: 396 GNGRMGGNDEREN-TLNQLLVEMDGFDT---TDHVVVLAGTNRPDILDKALLRPGRFDRH 451
Query: 391 I 391
I
Sbjct: 452 I 452
>UNIPROTKB|Q5AJC2 [details] [associations]
symbol:AFG3 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 CGD:CAL0000075
GO:GO:0016021 GO:GO:0005886 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 MEROPS:M41.002 EMBL:AACQ01000014
EMBL:AACQ01000013 RefSeq:XP_721627.1 RefSeq:XP_721746.1
ProteinModelPortal:Q5AJC2 SMR:Q5AJC2 STRING:Q5AJC2 GeneID:3636589
GeneID:3636771 KEGG:cal:CaO19.1669 KEGG:cal:CaO19.9238
Uniprot:Q5AJC2
Length = 795
Score = 103 (41.3 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 37/105 (35%), Positives = 51/105 (48%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLG 262
D D E K EIME +K F Y+K G RG +L GPPGTGK+ + A A G
Sbjct: 288 DVAGCD-ESKEEIMEFVK-FLQDPHKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEAG 345
Query: 263 YDIYDL---ELTEVH---NNSELRKLLMKTSSK---SIIVIEDID 298
+ E E+ S +R L KT+ + +II +++ID
Sbjct: 346 VPFLSVSGSEFVEMFVGVGASRVRDLF-KTAREMAPAIIFVDEID 389
Score = 85 (35.0 bits), Expect = 5.2e-06, Sum P(2) = 5.2e-06
Identities = 25/61 (40%), Positives = 34/61 (55%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G +GG D + TL+ LL DG + ++ + V TN + LD ALLR GR D H
Sbjct: 396 GNGRMGGNDEREN-TLNQLLVEMDGFDT---TDHVVVLAGTNRPDILDKALLRPGRFDRH 451
Query: 391 I 391
I
Sbjct: 452 I 452
>UNIPROTKB|Q9KU86 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0008270
GO:GO:0006200 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241 HSSP:P28691
KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299 RefSeq:NP_230286.1
ProteinModelPortal:Q9KU86 SMR:Q9KU86 DNASU:2615425 GeneID:2615425
KEGG:vch:VC0637 PATRIC:20080383 ProtClustDB:CLSK874054
Uniprot:Q9KU86
Length = 651
Score = 99 (39.9 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 200 STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+TF +A E K ++ E L D+ S +QK G G L+ GPPGTGK+ + A+A
Sbjct: 153 TTFSDVAGCDEAKEDVKE-LVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAG 211
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
+ + + E+ S +R + K +S II I++ID
Sbjct: 212 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEID 258
Score = 87 (35.7 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 26/61 (42%), Positives = 32/61 (52%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G GG D TL+ +L DG G+E I V TN + LDPALLR GR D
Sbjct: 265 GAGVGGGHDEREQ-TLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQ 320
Query: 391 I 391
+
Sbjct: 321 V 321
>TIGR_CMR|VC_0637 [details] [associations]
symbol:VC_0637 "cell division protein FtsH" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0000910 "cytokinesis"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0008270 GO:GO:0006200 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 KO:K03798 MEROPS:M41.001 OMA:TGKADDE PIR:E82299
RefSeq:NP_230286.1 ProteinModelPortal:Q9KU86 SMR:Q9KU86
DNASU:2615425 GeneID:2615425 KEGG:vch:VC0637 PATRIC:20080383
ProtClustDB:CLSK874054 Uniprot:Q9KU86
Length = 651
Score = 99 (39.9 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 200 STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+TF +A E K ++ E L D+ S +QK G G L+ GPPGTGK+ + A+A
Sbjct: 153 TTFSDVAGCDEAKEDVKE-LVDYLRDPSRFQKLGGKIPTGVLMVGPPGTGKTLLAKAIAG 211
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
+ + + E+ S +R + K +S II I++ID
Sbjct: 212 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKASPCIIFIDEID 258
Score = 87 (35.7 bits), Expect = 5.4e-06, Sum P(2) = 5.4e-06
Identities = 26/61 (42%), Positives = 32/61 (52%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G GG D TL+ +L DG G+E I V TN + LDPALLR GR D
Sbjct: 265 GAGVGGGHDEREQ-TLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQ 320
Query: 391 I 391
+
Sbjct: 321 V 321
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 104 (41.7 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 40/146 (27%), Positives = 67/146 (45%)
Query: 164 NDIRRKNQ-DRLLYTNS-RGGSLDSRGHPWESVSFKHPST-FDTLAIDPEKKIEIMEDLK 220
+D+R K D YT+S L+ R + V+ K P +D ++ K ++ +
Sbjct: 441 SDVRPKPPADTAFYTDSLEAALLEIRPTAMQDVNLKPPPVRWDDISGQESVKRDLRLAVH 500
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHN----N 276
QK R +G+LLYGPPG K+ AMA G + + ++ E+ N
Sbjct: 501 FITRPKEEIQKFIRVPPKGFLLYGPPGCSKTMTAQAMATESGLNFFAVKGAELLNMYVGE 560
Query: 277 SE--LRKLLMKT--SSKSIIVIEDID 298
SE +R L + ++ S+I ++ID
Sbjct: 561 SERQIRDLFSRARAAAPSMIFFDEID 586
Score = 83 (34.3 bits), Expect = 5.8e-06, Sum P(2) = 5.8e-06
Identities = 34/87 (39%), Positives = 42/87 (48%)
Query: 330 RCGSGSVGG---EDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSG 385
R G GS GG G ++ L+ LLN DG G +FV TN LDPA++R G
Sbjct: 592 RKGFGSDGGGATSQGGLNV-LTTLLNEMDGFEDLRG---VFVLAATNRPHALDPAIMRPG 647
Query: 386 RMDMHIFMSYCSYPAL--LILLKNYLG 410
R D I++ PA IL KN G
Sbjct: 648 RFDEIIYVPPPD-PAAREAILRKNSAG 673
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 101 (40.6 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 27/69 (39%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG L+YGPPGTGK+ M A+AN G + + E+ + S LRK + +S
Sbjct: 259 RGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSP 318
Query: 290 SIIVIEDID 298
+II I++ID
Sbjct: 319 AIIFIDEID 327
Score = 91 (37.1 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 24/77 (31%), Positives = 40/77 (51%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G+ G+ G ++ LL DG+ S + +FV TN +++DPAL+R GR+D I+
Sbjct: 607 GASAGDSGGGDRVVNQLLTEMDGVNS---KKNVFVIGATNRPDQIDPALMRPGRLDQLIY 663
Query: 393 MSYCSYPALLILLKNYL 409
+ A +L+ L
Sbjct: 664 VPLPDEEARFSILQTQL 680
Score = 37 (18.1 bits), Expect = 6.4e-06, Sum P(3) = 6.4e-06
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 197 KHPSTFDTLAIDPEKKI 213
+HP F ++ I P + I
Sbjct: 245 RHPQLFKSIGIKPPRGI 261
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 96 (38.9 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 39/146 (26%), Positives = 68/146 (46%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTF-DTLAIDPEKKIEIMEDLK 220
K ND+ N+D L ++ DSR E V K T+ D +D + + E++E +
Sbjct: 141 KPNDLVGVNKDSYLILDTLPSEFDSRVKAME-VDEKPTETYSDVGGLDKQIE-ELVEAIV 198
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTEVH--N 275
++ G +G L+YGPPGTGK+ + A A L +L +++
Sbjct: 199 LPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGE 258
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + +II I+++D
Sbjct: 259 GAKLVRDAFALAKEKAPTIIFIDELD 284
Score = 85 (35.0 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG S +++ V TN ++ LDPALLRSGR+D I
Sbjct: 304 TMLELLNQLDGFSS---DDRVKVLAATNRVDVLDPALLRSGRLDRKI 347
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 100 (40.3 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 28/80 (35%), Positives = 43/80 (53%)
Query: 227 SFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELR 280
S ++ G RG L+YGPPGTGK+ + A+AN G + + E+ + S LR
Sbjct: 225 SLFKAIGVKPPRGILMYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLR 284
Query: 281 KLLMKT--SSKSIIVIEDID 298
K + +S +II I++ID
Sbjct: 285 KAFEEAEKNSPAIIFIDEID 304
Score = 87 (35.7 bits), Expect = 6.9e-06, Sum P(2) = 6.9e-06
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEK-IFVF-TTNHIEKLDPALLRSGRMDMHI 391
G+VG G ++ +L DG+ G++K +F+ TN + +DPA+LR GR+D I
Sbjct: 585 GNVGDAGGAADRVINQILTEMDGM----GAKKNVFIIGATNRPDIIDPAILRPGRLDQLI 640
Query: 392 FMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK 451
++ + +LK L G + AD++E+ + CK
Sbjct: 641 YIPLPDDKSREAILKANLRKSPLAKEVDLTYIAKVTQG---FSGADLTEICQR----ACK 693
Query: 452 -AVRELLETLKVKAEK 466
A+R+ +E +++ EK
Sbjct: 694 LAIRQAIEA-EIRREK 708
Score = 66 (28.3 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 347 LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
+S LL DG+ S I + TN +DPAL R GR D I
Sbjct: 322 VSQLLTLMDGMKK--SSHLIVMAATNRPNSIDPALRRFGRFDREI 364
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 91 (37.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 194 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 253
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 254 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 286
Score = 90 (36.7 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 292 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 347
Query: 390 HI 391
I
Sbjct: 348 KI 349
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 99 (39.9 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK +T ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 88 (36.0 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 34/149 (22%), Positives = 67/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 592 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 648
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 649 IPLPDEKSRVAILKANLRKSPVAKDVDLDFLAKMTNG---FSGADLTEICQR----ACKL 701
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E+ ++ + E+ + V+ D
Sbjct: 702 AIRESIESEIRRERERQTNPSAMEVEEDD 730
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 91 (37.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 254
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 255 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 287
Score = 90 (36.7 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 293 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 348
Query: 390 HI 391
I
Sbjct: 349 KI 350
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 91 (37.1 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 195 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 254
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 255 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 287
Score = 90 (36.7 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 293 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 348
Query: 390 HI 391
I
Sbjct: 349 KI 350
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 91 (37.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 256 IQKYLGDGPKLVRELFRVAEEHGPSIVFIDEID 288
Score = 90 (36.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 294 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 349
Query: 390 HI 391
I
Sbjct: 350 KI 351
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 91 (37.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 256 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 90 (36.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 294 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 349
Query: 390 HI 391
I
Sbjct: 350 KI 351
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 91 (37.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 256 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 90 (36.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 294 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 349
Query: 390 HI 391
I
Sbjct: 350 KI 351
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 91 (37.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 256 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 90 (36.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 294 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 349
Query: 390 HI 391
I
Sbjct: 350 KI 351
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 91 (37.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 256 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 90 (36.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 294 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 349
Query: 390 HI 391
I
Sbjct: 350 KI 351
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 91 (37.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 256 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 90 (36.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 294 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 349
Query: 390 HI 391
I
Sbjct: 350 KI 351
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 91 (37.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 27/93 (29%), Positives = 49/93 (52%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYGPPGTGK+ + A+AN + EL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 256 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
Score = 90 (36.7 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 294 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 349
Query: 390 HI 391
I
Sbjct: 350 KI 351
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 98 (39.6 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L ++ DSR E V K ++ + EK+I E++E +
Sbjct: 131 KPGDLVGVNKDSYLILDTLPSEYDSRVKAME-VDEKPTEDYNDIG-GLEKQIQELVEAIV 188
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMI---AAMANYLGYDIYDLELTE--VHN 275
++K G +G LLYGPPGTGK+ M AA N + +L + + +
Sbjct: 189 LPMTHKERFEKLGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGD 248
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + II I++ID
Sbjct: 249 GAKLVRDAFQLAKEKAPCIIFIDEID 274
Score = 82 (33.9 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 23/47 (48%), Positives = 28/47 (59%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG S E+I V TN + LDPAL+RSGR+D I
Sbjct: 294 TMLELLNQLDGFSS---DERIKVIAATNRADILDPALMRSGRLDRKI 337
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 91 (37.1 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 141 STYEMIGGLDKQIK-EIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARAVA 199
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 200 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 247
Score = 90 (36.7 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 29/77 (37%), Positives = 41/77 (53%)
Query: 332 GSGSVGGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
GS GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 250 GSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRIDR 307
Query: 390 HIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 308 KIEFPPPNEEARLDILK 324
>CGD|CAL0004443 [details] [associations]
symbol:orf19.2057 species:5476 "Candida albicans" [GO:0005745
"m-AAA complex" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0006461 "protein complex assembly"
evidence=IEA] [GO:0006465 "signal peptide processing" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 CGD:CAL0004443 GO:GO:0016021
GO:GO:0005524 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 KO:K08956 GO:GO:0017111
TIGRFAMs:TIGR01241 EMBL:AACQ01000031 EMBL:AACQ01000030
MEROPS:M41.003 RefSeq:XP_719505.1 RefSeq:XP_719629.1
ProteinModelPortal:Q5AD10 SMR:Q5AD10 GeneID:3638753 GeneID:3638884
KEGG:cal:CaO19.2057 KEGG:cal:CaO19.9604 Uniprot:Q5AD10
Length = 846
Score = 114 (45.2 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 35/105 (33%), Positives = 52/105 (49%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
F +A E K E+ME +K F Y+K G RG +L GPPGTGK+ + A A
Sbjct: 372 FKDVAGMAEAKQEVMEFVK-FLQNPEKYEKLGAKIPRGAILSGPPGTGKTLLAKATAGEA 430
Query: 262 GYDIYDL---ELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
G Y + E E+ S +R L + ++ SI+ +++ID
Sbjct: 431 GVPFYSVSGSEFVEMFVGVGASRVRDLFKTARENAPSIVFVDEID 475
Score = 72 (30.4 bits), Expect = 8.4e-06, Sum P(2) = 8.4e-06
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHI 391
G+ G + TL+ LL DG + S+ + V TN + LD AL+R GR D H+
Sbjct: 484 GNATGANDERETTLNQLLVEMDGFDT---SDHVVVLAGTNRPDILDRALMRPGRFDRHV 539
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 92 (37.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 87 (35.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 255 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 312
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 313 RKIEFPPPNEEARLDILK 330
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 92 (37.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 87 (35.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 255 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 312
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 313 RKIEFPPPNEEARLDILK 330
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 92 (37.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 87 (35.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 255 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 312
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 313 RKIEFPPPNEEARLDILK 330
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 92 (37.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 87 (35.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 255 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 312
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 313 RKIEFPPPNEEARLDILK 330
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 92 (37.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 87 (35.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 255 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 312
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 313 RKIEFPPPNEEARLDILK 330
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 92 (37.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 87 (35.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 255 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 312
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 313 RKIEFPPPNEEARLDILK 330
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 92 (37.4 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 146 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 204
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 205 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 252
Score = 87 (35.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 255 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 312
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 313 RKIEFPPPNEEARLDILK 330
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 90 (36.7 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 32/108 (29%), Positives = 57/108 (52%)
Query: 200 STFDTLAIDPEKKI-EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + EK+I EI E ++ ++ G +G LLYGPPGTGK+ + A+A
Sbjct: 142 STYEMVG-GLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARAVA 200
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + S + R+L + + + SII +++ID
Sbjct: 201 HHTDCKFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEID 248
Score = 89 (36.4 bits), Expect = 9.4e-06, Sum P(2) = 9.4e-06
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 333 SGSVGGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMH 390
S S GG G++ + T+ LLN DG + + K+ + TN I+ LDPALLR GR+D
Sbjct: 255 SDSSGGS-GDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDPALLRPGRIDRK 311
Query: 391 I 391
I
Sbjct: 312 I 312
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 94 (38.1 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 92 (37.4 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 36/149 (24%), Positives = 66/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G+VG G ++ +L DG+ S + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNVGDGGGAADRVINQILTEMDGMSS---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 645 IPLPDEKSRIAILKANLRKSPISKDVDLDFLAKMTNG---FSGADLTEICQR----ACKL 697
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E ++ + E+ + V+ D
Sbjct: 698 AIRESIENEIRRERERQTNPSAMEVEEDD 726
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 92 (37.4 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 152 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 210
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 211 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 258
Score = 87 (35.7 bits), Expect = 9.6e-06, Sum P(2) = 9.6e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 261 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 318
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 319 RKIEFPPPNEEARLDILK 336
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 92 (37.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 154 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 260
Score = 87 (35.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 263 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 320
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 321 RKIEFPPPNEEARLDILK 338
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 92 (37.4 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 31/108 (28%), Positives = 58/108 (53%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ ++ G A +G LLYGPPGTGK+ + A+A
Sbjct: 154 STYEMIGGLDKQIK-EIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVA 212
Query: 259 NYLGYDIYDL---ELTE--VHNNSEL-RKLLM--KTSSKSIIVIEDID 298
++ + EL + + + + R+L + + + SII +++ID
Sbjct: 213 HHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEID 260
Score = 87 (35.7 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 332 GSGSV-GGEDGNNSI--TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS + GG G++ + T+ LLN DG + + K+ + TN I+ LD ALLR GR+D
Sbjct: 263 GSSRLEGGSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRID 320
Query: 389 MHIFMSYCSYPALLILLK 406
I + A L +LK
Sbjct: 321 RKIEFPPPNEEARLDILK 338
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 93 (37.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LL+GPPGTGK+ + A+AN G + + E+ + S LRK + +S
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSP 303
Query: 290 SIIVIEDID 298
+I+ I++ID
Sbjct: 304 AILFIDEID 312
Score = 93 (37.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
GSVG G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNA---KKNVFIIGATNRPDIIDPAVLRPGRLDQLIY 649
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + L + K L VG + AD++E+ + CK
Sbjct: 650 IPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVG---FSGADLTEICQR----ACKL 702
Query: 452 AVRELLETLKVKAEK 466
A+RE +E +++ EK
Sbjct: 703 AIRESIER-EIRQEK 716
Score = 79 (32.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Y K G RG L YGPPG GK+ + A+AN
Sbjct: 508 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 538
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 93 (37.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LL+GPPGTGK+ + A+AN G + + E+ + S LRK + +S
Sbjct: 244 RGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSP 303
Query: 290 SIIVIEDID 298
+I+ I++ID
Sbjct: 304 AILFIDEID 312
Score = 93 (37.8 bits), Expect = 9.7e-06, Sum P(2) = 9.7e-06
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
GSVG G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 593 GSVGDAGGAADRVINQVLTEMDGMNA---KKNVFIIGATNRPDIIDPAVLRPGRLDQLIY 649
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + L + K L VG + AD++E+ + CK
Sbjct: 650 IPLPDEASRLQIFKASLRKTPLSADLDLNFLAKNTVG---FSGADLTEICQR----ACKL 702
Query: 452 AVRELLETLKVKAEK 466
A+RE +E +++ EK
Sbjct: 703 AIRESIER-EIRQEK 716
Score = 79 (32.9 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Y K G RG L YGPPG GK+ + A+AN
Sbjct: 508 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 538
>SGD|S000000819 [details] [associations]
symbol:AFG3 "Component, with Yta12p, of the mitochondrial
inner membrane m-AAA pro" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS;IMP;IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0031966 "mitochondrial
membrane" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA;IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA;IMP]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0097002 "mitochondrial inner
boundary membrane" evidence=IDA] [GO:0001302 "replicative cell
aging" evidence=IMP] [GO:0002181 "cytoplasmic translation"
evidence=IMP] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006461 "protein complex assembly"
evidence=IMP] [GO:0006465 "signal peptide processing" evidence=IMP]
[GO:0005745 "m-AAA complex" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 SGD:S000000819
GO:GO:0005524 GO:GO:0006461 GO:GO:0046872 GO:GO:0008270
GO:GO:0006508 GO:GO:0008237 GO:GO:0001302 GO:GO:0004222
GO:GO:0016887 EMBL:BK006939 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
TIGRFAMs:TIGR01241 OMA:LYRFVTT EMBL:X81066 EMBL:X76643 EMBL:U18778
PIR:S46611 RefSeq:NP_010933.1 ProteinModelPortal:P39925 SMR:P39925
DIP:DIP-802N IntAct:P39925 MINT:MINT-563722 STRING:P39925
MEROPS:M41.002 PaxDb:P39925 PeptideAtlas:P39925
EnsemblFungi:YER017C GeneID:856737 KEGG:sce:YER017C CYGD:YER017c
OrthoDB:EOG4J14HG NextBio:982861 Genevestigator:P39925
GermOnline:YER017C GO:GO:0005745 GO:GO:0097002 GO:GO:0002181
GO:GO:0045041 GO:GO:0006465 Uniprot:P39925
Length = 761
Score = 98 (39.6 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 37/106 (34%), Positives = 49/106 (46%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA-- 258
+F +A E K EIME + F Y K G RG +L GPPGTGK+ + A A
Sbjct: 286 SFKNVAGCDEAKQEIMEFVH-FLKNPGKYTKLGAKIPRGAILSGPPGTGKTLLAKATAGE 344
Query: 259 -NYLGYDIYDLELTEVH---NNSELRKLLMKTSSK--SIIVIEDID 298
N + E E+ S +R L + S SII I++ID
Sbjct: 345 ANVPFLSVSGSEFVEMFVGVGASRVRDLFTQARSMAPSIIFIDEID 390
Score = 87 (35.7 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHI 391
G++GG + TL+ LL DG + S+++ V TN + LD AL+R GR D HI
Sbjct: 400 GALGGANDEREATLNQLLVEMDGFTT---SDQVVVLAGTNRPDVLDNALMRPGRFDRHI 455
>UNIPROTKB|Q2GIT4 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 EMBL:CP000235 GenomeReviews:CP000235_GR
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 95 (38.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 34/106 (32%), Positives = 51/106 (48%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSM---IAAM 257
TFD +A E K E++E + DF + K G +G LL G PGTGK+ + IA
Sbjct: 156 TFDDVAGIEEAKEELIE-IVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 258 ANYLGYDIYDLELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
AN + I + E+ S +R + K + II +++ID
Sbjct: 215 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEID 260
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/63 (41%), Positives = 32/63 (50%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G GG D TL+ LL DG S G + + TN + LDPALLR GR D +
Sbjct: 267 GIGLGGGNDEREQ-TLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQV 323
Query: 392 FMS 394
+S
Sbjct: 324 TIS 326
>TIGR_CMR|APH_1179 [details] [associations]
symbol:APH_1179 "ATP-dependent metalloprotease FtsH"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0000910 EMBL:CP000235
GenomeReviews:CP000235_GR GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_505717.1 ProteinModelPortal:Q2GIT4
SMR:Q2GIT4 STRING:Q2GIT4 GeneID:3930902 KEGG:aph:APH_1179
PATRIC:20951138 OMA:GHAVVAM BioCyc:APHA212042:GHPM-1185-MONOMER
Uniprot:Q2GIT4
Length = 611
Score = 95 (38.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 34/106 (32%), Positives = 51/106 (48%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSM---IAAM 257
TFD +A E K E++E + DF + K G +G LL G PGTGK+ + IA
Sbjct: 156 TFDDVAGIEEAKEELIE-IVDFLKHRQKFTKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 214
Query: 258 ANYLGYDIYDLELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
AN + I + E+ S +R + K + II +++ID
Sbjct: 215 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKHAPCIIFVDEID 260
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/63 (41%), Positives = 32/63 (50%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G GG D TL+ LL DG S G + + TN + LDPALLR GR D +
Sbjct: 267 GIGLGGGNDEREQ-TLNQLLVEMDGFESNEGV--VIIAATNRPDVLDPALLRPGRFDRQV 323
Query: 392 FMS 394
+S
Sbjct: 324 TIS 326
>WB|WBGene00010842 [details] [associations]
symbol:ymel-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0046872
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:Z49128 PIR:T23690
RefSeq:NP_499298.2 ProteinModelPortal:P54813 SMR:P54813
MEROPS:M41.A11 PaxDb:P54813 EnsemblMetazoa:M03C11.5.1
EnsemblMetazoa:M03C11.5.2 GeneID:176460 KEGG:cel:CELE_M03C11.5
UCSC:M03C11.5.1 CTD:176460 WormBase:M03C11.5
GeneTree:ENSGT00550000074836 InParanoid:P54813 OMA:KWNQYES
NextBio:892672 Uniprot:P54813
Length = 723
Score = 106 (42.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 33/106 (31%), Positives = 51/106 (48%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD + E K+E+ E++ D+ Y + G +G LL GPPGTGK+ + A+A
Sbjct: 246 TFDDVRGMDEAKLEV-EEIVDYLKDPEKYSRLGGRLPKGVLLVGPPGTGKTLLARAIAGE 304
Query: 261 LGYDIYDL---ELTEV---HNNSELRKLLMKTSSKS--IIVIEDID 298
+ E EV +R L K +++ II I++ID
Sbjct: 305 AQVPFFHTAGSEFDEVLVGQGARRVRDLFDKAKARAPCIIFIDEID 350
Score = 77 (32.2 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Query: 335 SVGGEDGNNSI------TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
SVG + +NSI T++ LL+ DG G I + TN ++ LD ALLR GR D
Sbjct: 351 SVGSKRVSNSIHPYANQTINQLLSEMDGFTRNEGI--IVIAATNRVDDLDKALLRPGRFD 408
Query: 389 MHI 391
+ +
Sbjct: 409 VRV 411
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 91 (37.1 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 27/61 (44%), Positives = 34/61 (55%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG S G K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 264 TLMELLNQMDGFDSL-GQVKM-IMATNRPDSLDPALLRPGRLDRKIEIPLPNEQARLEIL 321
Query: 406 K 406
K
Sbjct: 322 K 322
Score = 76 (31.8 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+ + G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 167 FLRVGITPPKGCLLYGPPGTGKTLLARAVASQL 199
Score = 48 (22.0 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 15/27 (55%), Positives = 16/27 (59%)
Query: 457 LETLKVKAEKNVKHGGI----IVKNSD 479
LE LK+ A K KHG I IVK SD
Sbjct: 318 LEILKIHALKIAKHGEIDYEAIVKLSD 344
>UNIPROTKB|P0AAI3 [details] [associations]
symbol:ftsH species:83333 "Escherichia coli K-12"
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0006508
"proteolysis" evidence=IEA;IDA] [GO:0043273 "CTPase activity"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA;IDA]
[GO:0030145 "manganese ion binding" evidence=IDA] [GO:0016021
"integral to membrane" evidence=IEA;IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0008270 GO:GO:0006508 EMBL:U18997
GO:GO:0004222 GO:GO:0016887 GO:GO:0030145 GO:GO:0030163
eggNOG:COG0465 TIGRFAMs:TIGR01241 GO:GO:0043273 EMBL:U01376
HOGENOM:HOG000217276 KO:K03798 EMBL:M83138 PIR:S35109
RefSeq:NP_417645.1 RefSeq:YP_491363.1 PDB:1LV7 PDBsum:1LV7
ProteinModelPortal:P0AAI3 SMR:P0AAI3 DIP:DIP-35828N IntAct:P0AAI3
MINT:MINT-1226643 MEROPS:M41.001 PaxDb:P0AAI3 PRIDE:P0AAI3
EnsemblBacteria:EBESCT00000000369 EnsemblBacteria:EBESCT00000000370
EnsemblBacteria:EBESCT00000017485 GeneID:12933986 GeneID:947690
KEGG:ecj:Y75_p3098 KEGG:eco:b3178 PATRIC:32121774 EchoBASE:EB1469
EcoGene:EG11506 OMA:RSIIDQC ProtClustDB:PRK10733
BioCyc:EcoCyc:EG11506-MONOMER BioCyc:ECOL316407:JW3145-MONOMER
BioCyc:MetaCyc:EG11506-MONOMER SABIO-RK:P0AAI3
EvolutionaryTrace:P0AAI3 Genevestigator:P0AAI3 Uniprot:P0AAI3
Length = 644
Score = 95 (38.5 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 32/107 (29%), Positives = 53/107 (49%)
Query: 200 STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+TF +A E K E+ E L ++ S +QK G +G L+ GPPGTGK+ + A+A
Sbjct: 149 TTFADVAGCDEAKEEVAE-LVEYLREPSRFQKLGGKIPKGVLMVGPPGTGKTLLAKAIAG 207
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
+ + + E+ S +R + K ++ II I++ID
Sbjct: 208 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Score = 87 (35.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 26/61 (42%), Positives = 32/61 (52%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G GG D TL+ +L DG G+E I V TN + LDPALLR GR D
Sbjct: 261 GAGLGGGHDEREQ-TLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDPALLRPGRFDRQ 316
Query: 391 I 391
+
Sbjct: 317 V 317
>CGD|CAL0002261 [details] [associations]
symbol:RPT5 species:5476 "Candida albicans" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002261 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000086 EMBL:AACQ01000085 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 RefSeq:XP_715432.1 RefSeq:XP_715502.1
ProteinModelPortal:Q5A0X3 STRING:Q5A0X3 GeneID:3642858
GeneID:3642911 KEGG:cal:CaO19.10635 KEGG:cal:CaO19.3123
Uniprot:Q5A0X3
Length = 454
Score = 92 (37.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 39/146 (26%), Positives = 68/146 (46%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIE-IMEDLK 220
K ND+ N+D L ++ DSR E V K + + +K+IE ++E +
Sbjct: 160 KPNDLIGVNKDSYLVLDTLPSEYDSRVKAME-VDEKPTEDYSDIG-GLDKQIEELIEAVV 217
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
++ G +G L+YGPPGTGK+ + A A G L +L + + +
Sbjct: 218 LPMKQADKFKNLGIKPPKGALMYGPPGTGKTLLARACAAQSGATFLKLAAPQLVQMFIGD 277
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + +II I+++D
Sbjct: 278 GAKLVRDAFALAKEKAPTIIFIDELD 303
Score = 87 (35.7 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG S +++ V TN ++ LDPALLRSGR+D I
Sbjct: 323 TMLELLNQLDGFGS---DDRVKVLAATNRVDTLDPALLRSGRLDRKI 366
Score = 38 (18.4 bits), Expect = 1.4e-05, Sum P(3) = 1.4e-05
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 468 VKHGGIIVKNSDYEEEEQEKRALES 492
+++G I+K+ D+ E E +A +S
Sbjct: 423 LRNGKSIIKHEDFVEAISEVQARKS 447
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 99 (39.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
D +D +K+ EI E ++ Y++ G RG LLYGPPGTGK+ ++ A+AN
Sbjct: 167 DVGGLDMQKQ-EIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 222
Score = 78 (32.5 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G D L LLN DG + + K+ + TN + LDPALLR GR+D I
Sbjct: 281 GADREVQRILLELLNQMDG-FEQTSNVKV-IMATNRADTLDPALLRPGRLDRKI 332
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 93 (37.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 27/63 (42%), Positives = 35/63 (55%)
Query: 332 GSGSVGGEDGNNSI---TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
GS V G G +S T+ LLN DG + + K+ + TN I+ LDPALLR GR+D
Sbjct: 265 GSSRVEGSSGGDSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDPALLRPGRID 322
Query: 389 MHI 391
I
Sbjct: 323 RKI 325
Score = 84 (34.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 200 STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
ST++ + +D + K EI E ++ + G A +G LL+GPPGTGK+ + A+A
Sbjct: 156 STYEMVGGLDKQIK-EIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARAVA 214
Query: 259 NY 260
++
Sbjct: 215 HH 216
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 89 (36.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG G+ KI + TN + LDPAL+R GR+D I + + A + +L
Sbjct: 260 TLMELLNHLDGFEEL-GNVKI-IMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEIL 317
Query: 406 KNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRE-LLETLKVKA 464
K + G AD+ V + +A+R+ ++E KA
Sbjct: 318 KIHANKMTKLGDIDYESVCRLCDG---FNGADLRNVCTEAGMFAIRAMRDYVIEEDFYKA 374
Query: 465 EKNVKHGGIIVKNSDYEE 482
+ + G + +YE+
Sbjct: 375 ARKISEGKKLEGKIEYEK 392
Score = 86 (35.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Y++ G +G LLYGPPGTGK+ + AMA+
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 89 (36.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 37/138 (26%), Positives = 59/138 (42%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG G+ KI + TN + LDPAL+R GR+D I + + A + +L
Sbjct: 260 TLMELLNHLDGFEEL-GNVKI-IMATNRPDVLDPALVRPGRLDRKIEIPLPNETARIEIL 317
Query: 406 KNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRE-LLETLKVKA 464
K + G AD+ V + +A+R+ ++E KA
Sbjct: 318 KIHANKMTKLGDIDYESVCRLCDG---FNGADLRNVCTEAGMFAIRAMRDYVIEEDFYKA 374
Query: 465 EKNVKHGGIIVKNSDYEE 482
+ + G + +YE+
Sbjct: 375 ARKISEGKKLEGKIEYEK 392
Score = 86 (35.3 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Y++ G +G LLYGPPGTGK+ + AMA+
Sbjct: 163 YKRVGIKTPKGVLLYGPPGTGKTLLARAMAS 193
>UNIPROTKB|Q2GFA1 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000236
GenomeReviews:CP000236_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST
MEROPS:M41.001 ProtClustDB:CLSK749654 RefSeq:YP_507882.1
ProteinModelPortal:Q2GFA1 SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708
KEGG:ech:ECH_1098 PATRIC:20577534
BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 99 (39.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSM---IAAM 257
TF+ +A E K E++E + DF +QK G +G LL G PGTGK+ + IA
Sbjct: 154 TFNDVAGIDEAKEELIE-IVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 258 ANYLGYDIYDLELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
AN + I + E+ S +R + K ++ II I++ID
Sbjct: 213 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEID 258
Score = 80 (33.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/63 (41%), Positives = 31/63 (49%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G GG D TL+ LL DG S G I + TN + LD ALLR GR D +
Sbjct: 265 GIGLGGGNDEREQ-TLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQV 321
Query: 392 FMS 394
+S
Sbjct: 322 TIS 324
>TIGR_CMR|ECH_1098 [details] [associations]
symbol:ECH_1098 "ATP-dependent metalloprotease FtsH"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 GO:GO:0000910
GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 OMA:ENMSYST MEROPS:M41.001
ProtClustDB:CLSK749654 RefSeq:YP_507882.1 ProteinModelPortal:Q2GFA1
SMR:Q2GFA1 STRING:Q2GFA1 GeneID:3927708 KEGG:ech:ECH_1098
PATRIC:20577534 BioCyc:ECHA205920:GJNR-1101-MONOMER Uniprot:Q2GFA1
Length = 610
Score = 99 (39.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSM---IAAM 257
TF+ +A E K E++E + DF +QK G +G LL G PGTGK+ + IA
Sbjct: 154 TFNDVAGIDEAKEELIE-IVDFLKHRQRFQKLGGKIPKGCLLIGSPGTGKTLLARAIAGE 212
Query: 258 ANYLGYDIYDLELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
AN + I + E+ S +R + K ++ II I++ID
Sbjct: 213 ANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCIIFIDEID 258
Score = 80 (33.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 26/63 (41%), Positives = 31/63 (49%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G GG D TL+ LL DG S G I + TN + LD ALLR GR D +
Sbjct: 265 GIGLGGGNDEREQ-TLNQLLVEMDGFESNEGV--IIIAATNRPDVLDSALLRPGRFDRQV 321
Query: 392 FMS 394
+S
Sbjct: 322 TIS 324
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 96 (38.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLL--MKTSSK 289
RG LLYGPPGTGK+ ++ A+A ++ ++ V S LRK+ +
Sbjct: 314 RGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQP 373
Query: 290 SIIVIEDID 298
SII I++ID
Sbjct: 374 SIIFIDEID 382
Score = 86 (35.3 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 20/69 (28%), Positives = 39/69 (56%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCS 397
GED ++ ++ LLN DG+ + + + TN + +DPAL+R GR+D +++ +
Sbjct: 658 GEDNSSDRVVAALLNELDGIEAL--RNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPN 715
Query: 398 YPALLILLK 406
+ A ++K
Sbjct: 716 FEARKQIVK 724
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 88 (36.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 34/149 (22%), Positives = 66/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 645 IPLPDEKSRIAILKANLRKSPVAKDVDLDFLAKMTNG---FSGADLTEICQR----ACKL 697
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E ++ + E+ + V+ D
Sbjct: 698 AIRESIENEIRRERERQTNPSAMEVEEDD 726
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 88 (36.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 34/149 (22%), Positives = 67/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNG---FSGADLTEICQR----ACKL 697
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E+ ++ + E+ + V+ D
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDD 726
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 88 (36.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 34/149 (22%), Positives = 67/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNG---FSGADLTEICQR----ACKL 697
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E+ ++ + E+ + V+ D
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDD 726
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 88 (36.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 34/149 (22%), Positives = 67/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNG---FSGADLTEICQR----ACKL 697
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E+ ++ + E+ + V+ D
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDD 726
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 88 (36.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 34/149 (22%), Positives = 67/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNG---FSGADLTEICQR----ACKL 697
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E+ ++ + E+ + V+ D
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDD 726
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 88 (36.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 34/149 (22%), Positives = 67/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNG---FSGADLTEICQR----ACKL 697
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E+ ++ + E+ + V+ D
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDD 726
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 94 (38.1 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 88 (36.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 34/149 (22%), Positives = 67/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNG---FSGADLTEICQR----ACKL 697
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E+ ++ + E+ + V+ D
Sbjct: 698 AIRESIESEIRRERERQTNPSAMEVEEDD 726
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 96 (38.9 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 203 DTLAIDPEKKIEIMEDLK-DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
D +D +K+ E+ E ++ G Y++ G RG LLYGPPGTGK+ ++ A+AN
Sbjct: 135 DVGGLDVQKQ-EVREAVELPLTQG-DLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 190
Score = 78 (32.5 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 24/59 (40%), Positives = 28/59 (47%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI-FMSY 395
G D L LL DG G+ + TN + LDPALLR GR+D I F SY
Sbjct: 249 GADREVQRILIELLTQMDGFDQ--GANVKVIMATNRADTLDPALLRPGRLDRKIEFPSY 305
>WB|WBGene00021425 [details] [associations]
symbol:ppgn-1 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
KO:K09552 EMBL:FO080872 EMBL:AB257343 RefSeq:NP_500191.3
UniGene:Cel.12073 ProteinModelPortal:G5EDB6 SMR:G5EDB6
MEROPS:M41.A12 EnsemblMetazoa:Y38F2AR.7.1
EnsemblMetazoa:Y38F2AR.7.2 GeneID:177021 KEGG:cel:CELE_Y38F2AR.7
CTD:177021 WormBase:Y38F2AR.7 OMA:DKISWSE NextBio:895012
Uniprot:G5EDB6
Length = 747
Score = 135 (52.6 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 61/198 (30%), Positives = 84/198 (42%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
F +A E K+EI E + D+ + K G RG LL GPPG GK+ + A+A
Sbjct: 284 FKDVAGCSEAKVEIREFV-DYLKNPGRFTKLGAKLPRGALLTGPPGCGKTLLAKALAAES 342
Query: 262 GYDIYDL---ELTEVHNN---SELRKLLMKTSSKS--IIVIEDIDCSIXXXXXXXXXXXX 313
+ E EV S +R L + S++ II I++ID +I
Sbjct: 343 TVPFISMNGSEFVEVIGGLGASRIRGLFKEARSRAPCIIYIDEID-AIGRKRS------- 394
Query: 314 XXXXXXXXXXYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNH 373
E G GG G TL+ LL DG+ S G+ + + +TN
Sbjct: 395 --------------EGAGAGGGFGGGSGEEEQTLNQLLVEMDGMGS--GNGVVVLASTNR 438
Query: 374 IEKLDPALLRSGRMDMHI 391
+ LD ALLR GR D HI
Sbjct: 439 ADVLDKALLRPGRFDRHI 456
Score = 44 (20.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 427 VVGKAEMTPADISEVLIKNKRDKCKAVRELLETLKVKAEKNVK 469
+V KA D LIKN DK + + + L +V ++VK
Sbjct: 683 IVAKANEATTD----LIKNNMDKLETIAQALLKREVLNYEDVK 721
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 94 (38.1 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 255 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 314
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 315 AIIFIDELD 323
Score = 88 (36.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 34/149 (22%), Positives = 67/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 604 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 660
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 661 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNG---FSGADLTEICQR----ACKL 713
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E+ ++ + E+ + V+ D
Sbjct: 714 AIRESIESEIRRERERQTNPSAMEVEEDD 742
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 96 (38.9 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 32/105 (30%), Positives = 48/105 (45%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
FD +A E K E+ E + F + G +G LL GPPGTGK+ + A+A
Sbjct: 171 FDDVAGIDEAKEELQE-VVTFLKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEA 229
Query: 262 GYDIYDL---ELTEVH---NNSELRKLLMKTSSKS--IIVIEDID 298
G + + E E+ S +R L K + +I I++ID
Sbjct: 230 GVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEID 274
Score = 83 (34.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 24/67 (35%), Positives = 31/67 (46%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+G GG D TL+ LL DG G I + TN + LD AL+R GR D +
Sbjct: 281 GAGIGGGNDEREQ-TLNQLLTEMDGFEGNTGI--IIIAATNRPDVLDSALMRPGRFDRQV 337
Query: 392 FMSYCSY 398
+ Y
Sbjct: 338 MVDAPDY 344
>TAIR|locus:2076929 [details] [associations]
symbol:AT3G02450 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011546 Pfam:PF00004 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 EMBL:AC021640
EMBL:CP002686 GO:GO:0051301 GO:GO:0008270 GO:GO:0009941
GO:GO:0004222 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY062811 EMBL:BT008384
IPI:IPI00524458 RefSeq:NP_186894.1 UniGene:At.27477
ProteinModelPortal:Q9M895 SMR:Q9M895 STRING:Q9M895 PRIDE:Q9M895
EnsemblPlants:AT3G02450.1 GeneID:821139 KEGG:ath:AT3G02450
InParanoid:Q9M895 OMA:SRRIYYN ProtClustDB:CLSN2685201
Genevestigator:Q9M895 Uniprot:Q9M895
Length = 622
Score = 112 (44.5 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 37/125 (29%), Positives = 60/125 (48%)
Query: 184 LDSRGHPWESVSFKHPST-FDTL-AIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYL 241
L + P + K+P+ FD + +D K E++E + G Y+K G RG L
Sbjct: 314 LSASNSPAKKRRSKNPTVGFDDVEGVDSAKD-ELVE-IVSCLQGSINYKKLGARLPRGVL 371
Query: 242 LYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLL--MKTSSKSIIV 293
L GPPGTGK+ + A+A G + + +E + +R L + +S SII
Sbjct: 372 LVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNAARKNSPSIIF 431
Query: 294 IEDID 298
I+++D
Sbjct: 432 IDELD 436
Score = 66 (28.3 bits), Expect = 2.7e-05, Sum P(2) = 2.7e-05
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 335 SVGGEDGNN-----SITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
+VGG+ G + TL+ LL DG S ++ I + TN E LD AL R GR
Sbjct: 437 AVGGKRGRSFNDERDQTLNQLLTEMDGFES--DTKVIVIAATNRPEALDSALCRPGRFSR 494
Query: 390 HIFMS 394
+ ++
Sbjct: 495 KVLVA 499
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 93 (37.8 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
+G LLYGPPG+GK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 243 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 302
Query: 290 SIIVIEDID 298
SII I++ID
Sbjct: 303 SIIFIDEID 311
Score = 86 (35.3 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 43/157 (27%), Positives = 66/157 (42%)
Query: 335 SVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFM 393
SVG G L+ LL DG+ + + +F+ TN + +DPALLR GR+D I++
Sbjct: 593 SVGDAGGAADRVLNQLLTEMDGMNA---KKTVFIIGATNRPDIIDPALLRPGRLDQLIYI 649
Query: 394 SYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK-A 452
+ + K+ L G + ADI+E+ ++ CK A
Sbjct: 650 PLPDEESRYQIFKSCLRKSPVAKDVDLRALAKYTQG---FSGADITEICQRS----CKYA 702
Query: 453 VRELLETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRA 489
+RE +E EK K + EEE E +A
Sbjct: 703 IRENIEK---DIEKERKRAESPEAMEEDEEEIAEIKA 736
Score = 80 (33.2 bits), Expect = 0.00061, Sum P(3) = 0.00061
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 212 KIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLE-- 269
K E+ E ++ ++K G + +G L YGPPG GK+ + A+AN + ++
Sbjct: 490 KRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQANFISIKGP 549
Query: 270 --LTEVHNNSE--LRKLLMKT--SSKSIIVIEDID 298
LT SE +R++ K S+ ++ +++D
Sbjct: 550 ELLTMWFGESEANVREIFDKARQSAPCVLFFDELD 584
Score = 44 (20.5 bits), Expect = 2.8e-05, Sum P(3) = 2.8e-05
Identities = 14/52 (26%), Positives = 25/52 (48%)
Query: 166 IRRKNQDRL--LYTNSRGGSLDSRGHPWESVSF--KHPSTFDTLAIDPEKKI 213
I+R++++RL + + GG E V +HP F ++ + P K I
Sbjct: 194 IKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGI 245
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 96 (38.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 203 DTLAIDPEKKIEIMEDLK-DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
D +D +K+ EI E ++ G Y + G RG LLYGPPGTGK+ ++ A+AN
Sbjct: 156 DVGGLDMQKQ-EIKEAVELPLTQG-DLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 78 (32.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G D L LLN DG + + K+ + TN + LDPALLR GR+D I
Sbjct: 270 GADREVQRILLELLNQMDG-FDQTSTVKV-IMATNRADTLDPALLRPGRLDRKI 321
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 96 (38.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 203 DTLAIDPEKKIEIMEDLK-DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
D +D +K+ EI E ++ G Y + G RG LLYGPPGTGK+ ++ A+AN
Sbjct: 156 DVGGLDMQKQ-EIKEAVELPLTQG-DLYSQIGIDPPRGVLLYGPPGTGKTMLVKAVAN 211
Score = 78 (32.5 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G D L LLN DG + + K+ + TN + LDPALLR GR+D I
Sbjct: 270 GADREVQRILLELLNQMDG-FDQTSTVKV-IMATNRADTLDPALLRPGRLDRKI 321
>WB|WBGene00004978 [details] [associations]
symbol:spg-7 species:6239 "Caenorhabditis elegans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=IMP] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0008270 GO:GO:0006508
GO:GO:0000003 GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277 KO:K08956
GO:GO:0017111 TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0030968
EMBL:FO081580 HSSP:Q9LCZ4 RefSeq:NP_491165.2
ProteinModelPortal:Q9N3T5 SMR:Q9N3T5 STRING:Q9N3T5 MEROPS:M41.A10
PaxDb:Q9N3T5 EnsemblMetazoa:Y47G6A.10 GeneID:171915
KEGG:cel:CELE_Y47G6A.10 UCSC:Y47G6A.10 CTD:171915
WormBase:Y47G6A.10 InParanoid:Q9N3T5 NextBio:873225 Uniprot:Q9N3T5
Length = 782
Score = 94 (38.1 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 27/81 (33%), Positives = 40/81 (49%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R G G +GG + TL+ LL DG ++ S I + TN ++ LD ALLR GR D
Sbjct: 401 RGGKGGMGGHSEQEN-TLNQLLVEMDG-FTTDESSVIVIAATNRVDILDSALLRPGRFDR 458
Query: 390 HIFMSYCSYPALLILLKNYLG 410
I++ + + +LG
Sbjct: 459 QIYVPVPDIKGRASIFRVHLG 479
Score = 87 (35.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA---NYLGYDIY 266
E KIEIME + +F Y+ G +G +L GPPGTGK+ + A A N +
Sbjct: 300 EAKIEIMEFV-NFLKNPQQYKDLGAKIPKGAILTGPPGTGKTLLAKATAGEANVPFITVS 358
Query: 267 DLELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
E E+ + +R + + + +S I+ I++ID
Sbjct: 359 GSEFLEMFVGVGPARVRDMFSMARKNSPCILFIDEID 395
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 90 (36.7 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG S G K+ + TN + LDPALLR GR+D I + + + L +L
Sbjct: 273 TLMELLNQLDGFDSL-GKVKV-IMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEIL 330
Query: 406 K 406
K
Sbjct: 331 K 331
Score = 75 (31.5 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+++ G +G LL+GPPGTGK+ + A+A+ L
Sbjct: 176 FKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
Score = 47 (21.6 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 457 LETLKVKAEKNVKHGGI----IVKNSD 479
LE LK+ + K KHG I +VK SD
Sbjct: 327 LEILKIHSNKITKHGEIDFEAVVKLSD 353
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 90 (36.7 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG S G K+ + TN + LDPALLR GR+D I + + + L +L
Sbjct: 273 TLMELLNQLDGFDSL-GKVKV-IMATNRPDTLDPALLRPGRLDRKIEIGLPNEQSRLEIL 330
Query: 406 K 406
K
Sbjct: 331 K 331
Score = 75 (31.5 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+++ G +G LL+GPPGTGK+ + A+A+ L
Sbjct: 176 FKRVGITPPKGCLLFGPPGTGKTLLARAVASQL 208
Score = 47 (21.6 bits), Expect = 3.0e-05, Sum P(3) = 3.0e-05
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 457 LETLKVKAEKNVKHGGI----IVKNSD 479
LE LK+ + K KHG I +VK SD
Sbjct: 327 LEILKIHSNKITKHGEIDFEAVVKLSD 353
>TAIR|locus:2066128 [details] [associations]
symbol:ftsh3 "FTSH protease 3" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0004222 EMBL:AC005315 GO:GO:0030163 eggNOG:COG0465
HOGENOM:HOG000217277 KO:K08956 OMA:WDEKDFR TIGRFAMs:TIGR01241
HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0004176 EMBL:BT002743 EMBL:AY063914
EMBL:AK226271 IPI:IPI00525466 PIR:T02738 RefSeq:NP_850129.1
UniGene:At.24335 ProteinModelPortal:Q84WU8 SMR:Q84WU8
MEROPS:M41.022 PaxDb:Q84WU8 PRIDE:Q84WU8 EnsemblPlants:AT2G29080.1
GeneID:817456 KEGG:ath:AT2G29080 GeneFarm:2506 TAIR:At2g29080
InParanoid:Q84WU8 PhylomeDB:Q84WU8 ProtClustDB:CLSN2692039
Genevestigator:Q84WU8 Uniprot:Q84WU8
Length = 809
Score = 95 (38.5 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 35/110 (31%), Positives = 51/110 (46%)
Query: 197 KHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAA 256
K+ F +A E K EIME + F Y+ G +G LL GPPGTGK+ + A
Sbjct: 316 KNKIYFKDVAGCDEAKQEIMEFVH-FLKNPKKYEDLGAKIPKGALLVGPPGTGKTLLAKA 374
Query: 257 MANYLGYDIYDL---ELTEVH---NNSELRKLLMKT--SSKSIIVIEDID 298
A G + + E+ S +R L + ++ SII I++ID
Sbjct: 375 TAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAPSIIFIDEID 424
Score = 86 (35.3 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/60 (41%), Positives = 31/60 (51%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G +GG D S TL+ LL DG + G + + TN + LD ALLR GR D I
Sbjct: 431 GRGGLGGNDERES-TLNQLLVEMDGFGTTAGV--VVLAGTNRPDILDKALLRPGRFDRQI 487
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 94 (38.1 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 87 (35.7 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 33/149 (22%), Positives = 67/149 (44%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGMST---KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L + + AD++E+ + CK
Sbjct: 645 IPLPDEKSRVAILKANLRKSPVAKAGDVDLEFLAKMTNG-FSGADLTEICQR----ACKL 699
Query: 452 AVRELLET-LKVKAEKNVKHGGIIVKNSD 479
A+RE +E+ ++ + E+ + V+ D
Sbjct: 700 AIRESIESEIRRERERQTNPSAMEVEEDD 728
>TAIR|locus:2094892 [details] [associations]
symbol:EMB2083 "embryo defective 2083" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004176 "ATP-dependent peptidase activity"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0004252 "serine-type endopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0000023 "maltose metabolic process"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006508 GO:GO:0009941 GO:GO:0004222 EMBL:AB023046
eggNOG:COG0465 GO:GO:0017111 IPI:IPI00526963 RefSeq:NP_566541.1
UniGene:At.38918 ProteinModelPortal:A8MPR5 SMR:A8MPR5 STRING:A8MPR5
PaxDb:A8MPR5 PRIDE:A8MPR5 EnsemblPlants:AT3G16290.1 GeneID:820876
KEGG:ath:AT3G16290 TAIR:At3g16290 HOGENOM:HOG000015086
InParanoid:A8MPR5 OMA:FFTHGEM PhylomeDB:A8MPR5
ProtClustDB:CLSN2688442 Genevestigator:A8MPR5 Uniprot:A8MPR5
Length = 876
Score = 99 (39.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 26/95 (27%), Positives = 51/95 (53%)
Query: 212 KIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL--- 268
++E+ E +K F +G Y++ G G LL GPPG GK+ + A+A G + + +
Sbjct: 419 RLELEEIVKFFTHG-EMYRRRGVKIPGGILLCGPPGVGKTLLAKAVAGEAGVNFFSISAS 477
Query: 269 ELTEVH---NNSELRKLLMKT--SSKSIIVIEDID 298
+ E++ S +R L + ++ S++ I+++D
Sbjct: 478 QFVEIYVGVGASRVRALYQEARENAPSVVFIDELD 512
Score = 82 (33.9 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 334 GSVGGEDGNN-SITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIF 392
G + G G TL+ LL DG E I + +TN + LDPAL+R GR D IF
Sbjct: 519 GLIKGSGGQERDATLNQLLVSLDGFEG--RGEVITIASTNRPDILDPALVRPGRFDRKIF 576
Query: 393 M 393
+
Sbjct: 577 I 577
>TIGR_CMR|NSE_0423 [details] [associations]
symbol:NSE_0423 "ATP-dependent metalloprotease FtsH"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 EMBL:CP000237 GenomeReviews:CP000237_GR
HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001 RefSeq:YP_506309.1
ProteinModelPortal:Q2GDY7 SMR:Q2GDY7 STRING:Q2GDY7 GeneID:3931660
KEGG:nse:NSE_0423 PATRIC:22680905 OMA:ENIESLH
ProtClustDB:CLSK749654 BioCyc:NSEN222891:GHFU-445-MONOMER
Uniprot:Q2GDY7
Length = 636
Score = 92 (37.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 201 TF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
TF D ID E K E+ E + +F +QK G +G LL GPPGTGK+ + A+A
Sbjct: 155 TFHDVAGID-EAKEELAE-IVEFLREPKKFQKLGGKIPKGCLLIGPPGTGKTLLAKAIAG 212
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
+ + + E+ S +R + K ++ +I I++ID
Sbjct: 213 EAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLIFIDEID 259
Score = 86 (35.3 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 27/63 (42%), Positives = 32/63 (50%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G GG D TL+ LL DG + G I + TN + LDPALLR GR D I
Sbjct: 266 GVGFGGGNDEREQ-TLNQLLVEMDGFEANEGV--IIIAATNRPDVLDPALLRPGRFDRQI 322
Query: 392 FMS 394
+S
Sbjct: 323 TIS 325
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 90 (36.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 34/106 (32%), Positives = 53/106 (50%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTG-RAWKRGYLLYGPPGTGKSSMIAAMA-- 258
F +A E K+EIME + +F YQ G + K+G +L GPPGTGK+ + A A
Sbjct: 98 FKDVAGCEEAKLEIMEFV-NFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATAGE 156
Query: 259 -NYLGYDIYDLELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
N + E E+ + +R L L + ++ I+ I++ID
Sbjct: 157 ANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID 202
Score = 87 (35.7 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G+ GG+ + TL+ LL DG + + + + TN + LDPALLR GR D I
Sbjct: 209 GRGNFGGQSEQEN-TLNQLLVEMDGFNTT--TNVVILAGTNRPDILDPALLRPGRFDRQI 265
Query: 392 FM 393
F+
Sbjct: 266 FI 267
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 108 (43.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 34/102 (33%), Positives = 50/102 (49%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKT-GRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL 268
E+ ++ + +L F +T G W RG LLYGPPGTGK+S++ A+ + L
Sbjct: 28 ERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVL 87
Query: 269 ELTEVHN----NSE--LRKLLMKTSSK------SIIVIEDID 298
VH SE LR+ + SS S+I I++ID
Sbjct: 88 SPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEID 129
Score = 68 (29.0 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 337 GGEDGNNSIT-----LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G E +NS T LS LL DGL G + + TN +D AL+R GR D+ +
Sbjct: 396 GDESSSNSSTVGERLLSTLLTEMDGLEEAKGI--LVLAATNRPYAIDAALMRPGRFDLVL 453
Query: 392 FM 393
++
Sbjct: 454 YV 455
Score = 66 (28.3 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 15/43 (34%), Positives = 26/43 (60%)
Query: 366 IFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNY 408
+ V +TN ++ +DPAL R+GR D + +S + L +L+ Y
Sbjct: 166 VVVASTNRVDAIDPALRRAGRFDALVEVSTPNEEDRLKILQLY 208
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 87 (35.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG S G K+ + TN I+ LDPAL+R GR+D I
Sbjct: 316 TMLELLNQLDGFDSR-GDVKV-IMATNRIDSLDPALIRPGRIDRKI 359
Score = 87 (35.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 39/133 (29%), Positives = 63/133 (47%)
Query: 177 TNSRGGSLDSRGHPWESVSFKHPSTFDTLA-IDP-EKKI-EIMEDLKDFANGMSFYQKTG 233
TNS G L P SV + ++ A I E +I EI E ++ Y+ G
Sbjct: 164 TNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIG 223
Query: 234 RAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLELTEVH--NNSELRKLLMKTSS 288
+G +LYGPPGTGK+ + A+AN + EL + + + +L + + K +
Sbjct: 224 IKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAE 283
Query: 289 K---SIIVIEDID 298
+ SI+ I++ID
Sbjct: 284 EHAPSIVFIDEID 296
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 87 (35.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 22/46 (47%), Positives = 28/46 (60%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG S G K+ + TN I+ LDPAL+R GR+D I
Sbjct: 316 TMLELLNQLDGFDSR-GDVKV-IMATNRIDSLDPALIRPGRIDRKI 359
Score = 87 (35.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 39/133 (29%), Positives = 63/133 (47%)
Query: 177 TNSRGGSLDSRGHPWESVSFKHPSTFDTLA-IDP-EKKI-EIMEDLKDFANGMSFYQKTG 233
TNS G L P SV + ++ A I E +I EI E ++ Y+ G
Sbjct: 164 TNSVVGILLDEVDPLVSVMKVEKAPLESYADIGGLESQIQEIKEAVELPLTHPELYEDIG 223
Query: 234 RAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLELTEVH--NNSELRKLLMKTSS 288
+G +LYGPPGTGK+ + A+AN + EL + + + +L + + K +
Sbjct: 224 IKPPKGVILYGPPGTGKTLLAKAVANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAE 283
Query: 289 K---SIIVIEDID 298
+ SI+ I++ID
Sbjct: 284 EHAPSIVFIDEID 296
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 93 (37.8 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
+G LLYGPPG+GK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301
Query: 290 SIIVIEDID 298
SII I++ID
Sbjct: 302 SIIFIDEID 310
Score = 85 (35.0 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 41/160 (25%), Positives = 66/160 (41%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMH 390
G GS G G L+ LL DG+ + + +F+ TN + +D ALLR GR+D
Sbjct: 590 GGGSGGDGGGAADRVLNQLLTEMDGMNA---KKTVFIIGATNRPDIIDSALLRPGRLDQL 646
Query: 391 IFMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKC 450
I++ + L + K L G + ADI+E+ + C
Sbjct: 647 IYIPLPDEDSRLNIFKAALRKSPIAKDVDIGALAKYTQG---FSGADITEICQR----AC 699
Query: 451 K-AVRELLETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRA 489
K A+RE +E ++ EK ++ +E + K A
Sbjct: 700 KYAIRENIEK-DIEKEKRRSENPEAMEEDGVDEVSEIKAA 738
Score = 43 (20.2 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 166 IRRKNQDRL--LYTNSRGGSLDSRGHPWESVSF--KHPSTFDTLAIDPEKKI 213
++R++++RL + + GG E V +HP F ++ + P K I
Sbjct: 193 VKREDEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGI 244
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 91 (37.1 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA--- 258
F +A E K+EIME + +F YQ G +G +L GPPGTGK+ + A A
Sbjct: 306 FKDVAGCEEAKLEIMEFV-NFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 364
Query: 259 NYLGYDIYDLELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
N + E E+ + +R L L + ++ I+ I++ID
Sbjct: 365 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID 409
Score = 87 (35.7 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G+ GG+ + TL+ LL DG + + + + TN + LDPALLR GR D I
Sbjct: 416 GRGNFGGQSEQEN-TLNQLLVEMDGFNTT--TNVVILAGTNRPDILDPALLRPGRFDRQI 472
Query: 392 FM 393
F+
Sbjct: 473 FI 474
Score = 43 (20.2 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 7/18 (38%), Positives = 13/18 (72%)
Query: 477 NSDYEEEEQEKRALESPI 494
N + E+E++EK+ E P+
Sbjct: 779 NKEREKEKKEKKEKEEPV 796
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 88 (36.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 39/146 (26%), Positives = 67/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIE-IMEDLK 220
K D+ N+D L ++ D+R E V K + + +K+IE I+E +
Sbjct: 171 KPGDLIGVNKDSYLILDTLPAEYDNRVKAME-VDEKPTEKYTDIG-GLDKQIEEIVEAIV 228
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
++K G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 229 WPMKEAERFKKLGIKAPKGALMYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGD 288
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 289 GAKLVRDCFALAKEKAPSIIFIDELD 314
Score = 86 (35.3 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 23/47 (48%), Positives = 29/47 (61%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG S ++I V TN ++ LDPALLRSGR+D I
Sbjct: 334 TMLELLNQLDGFAS---DDRIKVLAATNRVDVLDPALLRSGRLDRKI 377
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 90 (36.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 294 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 349
Query: 390 HI 391
I
Sbjct: 350 KI 351
Score = 83 (34.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYG PGTGK+ + A+AN + EL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 256 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 90 (36.7 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 294 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKV-IMATNRIETLDPALIRPGRIDR 349
Query: 390 HI 391
I
Sbjct: 350 KI 351
Score = 83 (34.3 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 26/93 (27%), Positives = 48/93 (51%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLEL 270
EI E ++ +Y++ G +G +LYG PGTGK+ + A+AN + EL
Sbjct: 196 EIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSEL 255
Query: 271 TEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
+ + + +L + L + + + SI+ I++ID
Sbjct: 256 IQKYLGDGPKLVRELFRVAEEHAPSIVFIDEID 288
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 95 (38.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN--- 259
D +D +K+ E+ E ++ Y+K G G L+YGPPGTGK+ ++ A+AN
Sbjct: 139 DLGGLDMQKQ-EMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQ 197
Query: 260 --YLGYDIYDLELTEVHNNSELRKL-----LMKTSSKSIIVIEDID 298
++G + E + + R + L + +S SII I+++D
Sbjct: 198 VTFIG--VVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD 241
Score = 76 (31.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G D L LLN DG + + K+ + TN + LDPALLR GR+D I
Sbjct: 253 GADREVQRILLELLNQMDG-FDKSTNVKV-IMATNRADTLDPALLRPGRLDRKI 304
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 95 (38.5 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 31/106 (29%), Positives = 54/106 (50%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN--- 259
D +D +K+ E+ E ++ Y+K G G L+YGPPGTGK+ ++ A+AN
Sbjct: 139 DLGGLDMQKQ-EMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAVANETQ 197
Query: 260 --YLGYDIYDLELTEVHNNSELRKL-----LMKTSSKSIIVIEDID 298
++G + E + + R + L + +S SII I+++D
Sbjct: 198 VTFIG--VVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVD 241
Score = 76 (31.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 22/54 (40%), Positives = 28/54 (51%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G D L LLN DG + + K+ + TN + LDPALLR GR+D I
Sbjct: 253 GADREVQRILLELLNQMDG-FDKSTNVKV-IMATNRADTLDPALLRPGRLDRKI 304
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 90 (36.7 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLL--MKTSSK 289
RG LL+GPPGTGK+ + A+AN G + + EV + S LRK + +
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQP 304
Query: 290 SIIVIEDID 298
+I+ I++ID
Sbjct: 305 AILFIDEID 313
Score = 89 (36.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 334 GSVGGEDGNNSI-TLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHI 391
G GG+ G S ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNA---KKNVFIIGATNRPDIIDPAVLRPGRLDQLI 650
Query: 392 FMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK 451
++ + +LK L VG + AD++E+ + CK
Sbjct: 651 YIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVG---FSGADLTEICQR----ACK 703
Query: 452 -AVRELLETLKVKAEK 466
A+RE +E +++ EK
Sbjct: 704 LAIRESIEK-EIRIEK 718
Score = 79 (32.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Y K G RG L YGPPG GK+ + A+AN
Sbjct: 509 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 539
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 90 (36.7 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 25/69 (36%), Positives = 38/69 (55%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLL--MKTSSK 289
RG LL+GPPGTGK+ + A+AN G + + EV + S LRK + +
Sbjct: 245 RGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQP 304
Query: 290 SIIVIEDID 298
+I+ I++ID
Sbjct: 305 AILFIDEID 313
Score = 89 (36.4 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 36/136 (26%), Positives = 63/136 (46%)
Query: 334 GSVGGEDGNNSI-TLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHI 391
G GG+ G S ++ +L DG+ + + +F+ TN + +DPA+LR GR+D I
Sbjct: 594 GGAGGDGGGASDRVINQVLTEMDGMNA---KKNVFIIGATNRPDIIDPAVLRPGRLDQLI 650
Query: 392 FMSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK 451
++ + +LK L VG + AD++E+ + CK
Sbjct: 651 YIPLPDEASRHQILKASLRKTPLSKDLDLTFLAKNTVG---FSGADLTEICQR----ACK 703
Query: 452 -AVRELLETLKVKAEK 466
A+RE +E +++ EK
Sbjct: 704 LAIRESIEK-EIRIEK 718
Score = 79 (32.9 bits), Expect = 0.00070, Sum P(2) = 0.00070
Identities = 16/31 (51%), Positives = 19/31 (61%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
Y K G RG L YGPPG GK+ + A+AN
Sbjct: 509 YLKFGMQPSRGVLFYGPPGCGKTLLAKAIAN 539
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 92 (37.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 24/73 (32%), Positives = 38/73 (52%)
Query: 191 WESVSFKHPS-TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTG 249
+ SF+ TFD + E+ E+ E ++ +Q+ G +G LLYGPPGTG
Sbjct: 168 YNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTG 227
Query: 250 KSSMIAAMANYLG 262
K+ + A+A +G
Sbjct: 228 KTLLAKAVAATIG 240
Score = 80 (33.2 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 21/46 (45%), Positives = 26/46 (56%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
TL LL DG + G KI + TN + LDPALLR GR+D +
Sbjct: 304 TLMELLTQMDG-FDNLGQTKI-IMATNRPDTLDPALLRPGRLDRKV 347
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 89 (36.4 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 28/81 (34%), Positives = 44/81 (54%)
Query: 184 LDSRGHPWESVSF--KHP-STFDTLA-IDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRG 239
L S+ P S+ K P ST++ + +D + K EI E ++ + G A +G
Sbjct: 153 LPSKVDPLVSLMMVEKVPDSTYEMVGGLDTQIK-EIKEVIELPVKHPELFDALGIAQPKG 211
Query: 240 YLLYGPPGTGKSSMIAAMANY 260
LLYGPPGTGK+ + A+A++
Sbjct: 212 VLLYGPPGTGKTLLARAVAHH 232
Score = 83 (34.3 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 25/58 (43%), Positives = 32/58 (55%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
GS GG D T+ LLN DG + + K+ + TN I+ LD ALLR GR+D I
Sbjct: 287 GSRGG-DSEVQRTMLELLNQLDG-FEATKNIKV-IMATNRIDILDSALLRPGRIDRKI 341
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 92 (37.4 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 347 LSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLK 406
L+ LLN DG+ G + V TN +++D ALLR GR+D HI++ A L +LK
Sbjct: 637 LTSLLNEIDGVEELKGV--VIVAATNRPDEIDAALLRPGRLDRHIYVGPPDVNARLEILK 694
Score = 86 (35.3 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 31/124 (25%), Positives = 55/124 (44%)
Query: 184 LDSRGHPWESVSFKHPSTF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLL 242
+D R + + P + + E K ++ E ++ + + G + +G LL
Sbjct: 496 VDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLL 555
Query: 243 YGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNN----SE--LRKLLMKTSSK--SIIVI 294
YGPPG K+ A+A G + ++ E+ N SE +R++ K S SII
Sbjct: 556 YGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIREIFRKARSAAPSIIFF 615
Query: 295 EDID 298
++ID
Sbjct: 616 DEID 619
Score = 80 (33.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 210 EKKIEIMEDLKDFA-NGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+K+IE ++ + + + + G + RG LL+GPPGTGK+ ++ +AN
Sbjct: 251 DKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 94 (38.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
RG LLYGPPGTGK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 239 RGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP 298
Query: 290 SIIVIEDID 298
+II I+++D
Sbjct: 299 AIIFIDELD 307
Score = 84 (34.6 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 33/136 (24%), Positives = 63/136 (46%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIF 392
G++G G ++ +L DG+ S + +F+ TN + +DPA+LR GR+D I+
Sbjct: 588 GNIGDGGGAADRVINQILTEMDGM-SI--KKNVFIIGATNRPDIIDPAILRPGRLDQLIY 644
Query: 393 MSYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK- 451
+ + + +LK L G + AD++E+ + CK
Sbjct: 645 IPLPDEKSRMAILKANLRKSPVAKDVDVDFLAKMTNG---FSGADLTEICQR----ACKL 697
Query: 452 AVRELLETLKVKAEKN 467
A+RE +E +++ E++
Sbjct: 698 AIRESIEN-EIRRERD 712
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 91 (37.1 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA--- 258
F +A E K+EIME + +F YQ G +G +L GPPGTGK+ + A A
Sbjct: 307 FKDVAGCEEAKLEIMEFV-NFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 365
Query: 259 NYLGYDIYDLELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
N + E E+ + +R L L + ++ I+ I++ID
Sbjct: 366 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID 410
Score = 87 (35.7 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G+ GG+ + TL+ LL DG + + + + TN + LDPALLR GR D I
Sbjct: 417 GRGNFGGQSEQEN-TLNQLLVEMDGFNTT--TNVVILAGTNRPDILDPALLRPGRFDRQI 473
Query: 392 FM 393
F+
Sbjct: 474 FI 475
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 95 (38.5 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 45/152 (29%), Positives = 64/152 (42%)
Query: 335 SVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMS 394
S G + T+ LLN DG + G K+ + TN IE LDPAL+R GR+D I
Sbjct: 298 STSGGEREIQRTMLELLNQLDG-FDDRGDIKV-IMATNKIESLDPALIRPGRIDRKILFE 355
Query: 395 YCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVR 454
P K + V GK +++ ADI + + A+R
Sbjct: 356 N---PDANTKKKILTIHTSKMSLADDVNLDEIVTGKDDLSGADIKAICTEAG---LLALR 409
Query: 455 ELLETLKVKAE--KNVKHGGIIVKNSDYEEEE 484
E ++VKAE K+ K ++KN E E
Sbjct: 410 E--RRMQVKAEDFKSAKER--VLKNKVEENLE 437
Score = 77 (32.2 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 210 EKKI-EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
E +I EI E ++ Y++ G +G +LYG PGTGK+ + A+AN
Sbjct: 192 ESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVAN 242
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 88 (36.0 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 248 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 305
Query: 406 KNYLG 410
K + G
Sbjct: 306 KIHAG 310
Score = 82 (33.9 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 151 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 183
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 94 (38.1 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLL--MKTSSK 289
RG++++GPPG GK+ A+A L + L TE+ ++R+L K +S
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSP 299
Query: 290 SIIVIEDID 298
I++++DID
Sbjct: 300 CILILDDID 308
Score = 77 (32.2 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFMSYC 396
GE + ++ LL DG+ G +K+F+ TN + +D A+LR GR+D +F+ +
Sbjct: 646 GESSGGARLVNQLLTEMDGVE---GRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFP 702
Query: 397 S 397
S
Sbjct: 703 S 703
Score = 48 (22.0 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 193 SVSFKHPSTFDTLAIDPEK 211
++ K P TF TL +DP +
Sbjct: 222 AMHLKRPKTFATLGVDPPR 240
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 94 (38.1 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLL--MKTSSK 289
RG++++GPPG GK+ A+A L + L TE+ ++R+L K +S
Sbjct: 240 RGFIVHGPPGCGKTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSP 299
Query: 290 SIIVIEDID 298
I++++DID
Sbjct: 300 CILILDDID 308
Score = 77 (32.2 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFMSYC 396
GE + ++ LL DG+ G +K+F+ TN + +D A+LR GR+D +F+ +
Sbjct: 646 GESSGGARLVNQLLTEMDGVE---GRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDFP 702
Query: 397 S 397
S
Sbjct: 703 S 703
Score = 48 (22.0 bits), Expect = 6.9e-05, Sum P(3) = 6.9e-05
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 193 SVSFKHPSTFDTLAIDPEK 211
++ K P TF TL +DP +
Sbjct: 222 AMHLKRPKTFATLGVDPPR 240
>POMBASE|SPCC965.04c [details] [associations]
symbol:SPCC965.04c "mitochondrial inner membrane i-AAA
protease complex subunit Yme1 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0004176 "ATP-dependent peptidase
activity" evidence=ISO] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=ISO] [GO:0007005
"mitochondrion organization" evidence=ISS] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0031942 "i-AAA complex" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC965.04c GO:GO:0016021 GO:GO:0005524 EMBL:CU329672
GO:GO:0046872 GO:GO:0004222 GO:GO:0006515 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0007005 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942 PIR:T41657
RefSeq:NP_588514.1 ProteinModelPortal:O59824 SMR:O59824
STRING:O59824 EnsemblFungi:SPCC965.04c.1 GeneID:2538746
KEGG:spo:SPCC965.04c KO:K08955 OMA:LANANMS OrthoDB:EOG4FR40W
NextBio:20799930 Uniprot:O59824
Length = 709
Score = 99 (39.9 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 29/104 (27%), Positives = 51/104 (49%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLG 262
D +D K E +E++ DF + + + G RG LL GPPGTGK+ + A+A
Sbjct: 268 DVQGVDEAK--EELEEIVDFLRDPTHFTRLGGKLPRGVLLTGPPGTGKTMLARAVAGEAN 325
Query: 263 YDIYDL---ELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
+ + + E++ +R+L + + SII I+++D
Sbjct: 326 VPFFFMSGSQFDEMYVGVGAKRVRELFAAARKQAPSIIFIDELD 369
Score = 77 (32.2 bits), Expect = 7.0e-05, Sum P(2) = 7.0e-05
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 366 IFVFTTNHIEKLDPALLRSGRMDMHI 391
+F+ TN E LDPAL R GR D HI
Sbjct: 408 VFIGATNFPESLDPALTRPGRFDRHI 433
>SGD|S000004695 [details] [associations]
symbol:YTA12 "Component of the mitochondrial inner membrane
m-AAA protease" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS;IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0006508 "proteolysis" evidence=IEA;IMP]
[GO:0016020 "membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;IDA]
[GO:0008233 "peptidase activity" evidence=IEA] [GO:0008237
"metallopeptidase activity" evidence=IEA;IMP] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0097002 "mitochondrial inner boundary membrane"
evidence=IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0045041 "protein import into mitochondrial
intermembrane space" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006461 "protein complex assembly" evidence=IMP]
[GO:0006465 "signal peptide processing" evidence=IMP] [GO:0005745
"m-AAA complex" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0031966 "mitochondrial membrane" evidence=IEA]
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 SGD:S000004695 EMBL:U09358 GO:GO:0005524
GO:GO:0006461 GO:GO:0046872 GO:GO:0008270 GO:GO:0006508
GO:GO:0008237 GO:GO:0004222 GO:GO:0016887 EMBL:BK006946
GO:GO:0030163 EMBL:Z49259 eggNOG:COG0465
GeneTree:ENSGT00530000063070 KO:K08956 TIGRFAMs:TIGR01241
OrthoDB:EOG4J14HG GO:GO:0005745 GO:GO:0097002 GO:GO:0045041
GO:GO:0006465 EMBL:X81068 EMBL:AY693099 PIR:S54465
RefSeq:NP_013807.1 ProteinModelPortal:P40341 SMR:P40341
DIP:DIP-889N IntAct:P40341 MINT:MINT-596896 STRING:P40341
MEROPS:M41.003 PaxDb:P40341 PeptideAtlas:P40341
EnsemblFungi:YMR089C GeneID:855114 KEGG:sce:YMR089C CYGD:YMR089c
OMA:NFSGAND NextBio:978455 Genevestigator:P40341 GermOnline:YMR089C
Uniprot:P40341
Length = 825
Score = 107 (42.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 37/104 (35%), Positives = 51/104 (49%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLG 262
D D E K EIME + F S Y+K G RG +L GPPGTGK+ + A A G
Sbjct: 349 DVAGCD-EAKEEIMEFVS-FLKEPSRYEKMGAKIPRGAILSGPPGTGKTLLAKATAGEAG 406
Query: 263 YDIYDL---ELTEVHNNSELRKL--LMKTSSK---SIIVIEDID 298
Y + E E+ ++ L KT+ + SI+ I++ID
Sbjct: 407 VPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVFIDEID 450
Score = 70 (29.7 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G+ G + TL+ +L DG + + TN + LD ALLR GR D HI
Sbjct: 459 GNFSGANDERENTLNQMLVEMDGFTPA--DHVVVLAGTNRPDILDKALLRPGRFDRHI 514
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 88 (36.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 256 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 406 KNYLG 410
K + G
Sbjct: 314 KIHAG 318
Score = 82 (33.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 88 (36.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 256 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 406 KNYLG 410
K + G
Sbjct: 314 KIHAG 318
Score = 82 (33.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 88 (36.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 256 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 406 KNYLG 410
K + G
Sbjct: 314 KIHAG 318
Score = 82 (33.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 88 (36.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 256 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 406 KNYLG 410
K + G
Sbjct: 314 KIHAG 318
Score = 82 (33.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 88 (36.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 256 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 406 KNYLG 410
K + G
Sbjct: 314 KIHAG 318
Score = 82 (33.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 88 (36.0 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 256 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 313
Query: 406 KNYLG 410
K + G
Sbjct: 314 KIHAG 318
Score = 82 (33.9 bits), Expect = 7.2e-05, Sum P(2) = 7.2e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 90 (36.7 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
TL LLN DG + G KI + TN + LDPALLR+GR+D I
Sbjct: 260 TLMELLNQLDG-FDYLGKTKI-IMATNRPDTLDPALLRAGRLDRKI 303
Score = 80 (33.2 bits), Expect = 7.3e-05, Sum P(2) = 7.3e-05
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+Q+ G +G LLYGPPGTGK+ + A+A+
Sbjct: 163 FQRVGIKPPKGVLLYGPPGTGKTLLARAVAS 193
>TIGR_CMR|SO_1197 [details] [associations]
symbol:SO_1197 "ATP-dependent metalloprotease FtsH"
species:211586 "Shewanella oneidensis MR-1" [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051301 "cell division" evidence=ISS]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0006200
GO:GO:0006508 GO:GO:0004222 GO:GO:0016887 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0030163 TIGRFAMs:TIGR01241
HSSP:P28691 HOGENOM:HOG000217276 KO:K03798 MEROPS:M41.001
OMA:RSIIDQC RefSeq:NP_716822.2 ProteinModelPortal:Q8EHM2 SMR:Q8EHM2
GeneID:1169025 KEGG:son:SO_1197 PATRIC:23522048
ProtClustDB:CLSK906146 Uniprot:Q8EHM2
Length = 652
Score = 96 (38.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 33/107 (30%), Positives = 52/107 (48%)
Query: 200 STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+TF +A E K E+ E L D+ + +QK G G L+ GPPGTGK+ + A+A
Sbjct: 154 TTFADVAGCDEAKEEVKE-LVDYLRDPTKFQKLGGRIPTGVLMVGPPGTGKTLLAKAIAG 212
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
+ + + E+ S +R + K S+ II I++ID
Sbjct: 213 ESKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKSAPCIIFIDEID 259
Score = 79 (32.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 25/61 (40%), Positives = 31/61 (50%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G GG D TL+ +L DG G+E I V TN + LD ALLR GR D
Sbjct: 266 GAGLGGGHDEREQ-TLNQMLVEMDGFE---GNEGIIVIAATNRPDVLDSALLRPGRFDRQ 321
Query: 391 I 391
+
Sbjct: 322 V 322
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 88 (36.0 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 262 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 319
Query: 406 KNYLG 410
K + G
Sbjct: 320 KIHAG 324
Score = 82 (33.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 165 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 197
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 94 (38.1 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 30/97 (30%), Positives = 48/97 (49%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL- 268
E K+EIME + +F YQ G +G LL GPPGTGK+ + A A G +
Sbjct: 310 EAKLEIMEFV-NFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGEAGVPFITVN 368
Query: 269 --ELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
E E+ + +R + L + ++ I+ +++ID
Sbjct: 369 GSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEID 405
Score = 83 (34.3 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 23/62 (37%), Positives = 33/62 (53%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G GG+ + TL+ LL DG S + + + TN + LDPAL+R GR D I
Sbjct: 412 GRGHFGGQSEQEN-TLNQLLVEMDGFNST--TNVVVLAGTNRPDVLDPALMRPGRFDRQI 468
Query: 392 FM 393
++
Sbjct: 469 YI 470
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 88 (36.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 270 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 327
Query: 406 KNYLG 410
K + G
Sbjct: 328 KIHAG 332
Score = 82 (33.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 173 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 205
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 88 (36.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 270 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 327
Query: 406 KNYLG 410
K + G
Sbjct: 328 KIHAG 332
Score = 82 (33.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 173 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 205
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 88 (36.0 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 270 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDIL 327
Query: 406 KNYLG 410
K + G
Sbjct: 328 KIHAG 332
Score = 82 (33.9 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 173 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 205
>SGD|S000006228 [details] [associations]
symbol:YME1 "Catalytic subunit of the mitochondrial inner
membrane i-AAA protease" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IMP] [GO:0005743
"mitochondrial inner membrane" evidence=IEA;IDA] [GO:0005739
"mitochondrion" evidence=IEA;IDA] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004176 "ATP-dependent peptidase activity" evidence=IGI;IMP]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IMP] [GO:0008233 "peptidase activity"
evidence=IEA] [GO:0008237 "metallopeptidase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0031942 "i-AAA complex"
evidence=IDA] InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
SGD:S000006228 GO:GO:0005524 GO:GO:0006457 GO:GO:0046872
GO:GO:0004222 EMBL:Z71255 EMBL:BK006949 GO:GO:0006515
eggNOG:COG0465 TIGRFAMs:TIGR01241 EMBL:Z49274 GO:GO:0004176
HOGENOM:HOG000217276 MEROPS:M41.004 GO:GO:0031942
GeneTree:ENSGT00550000074836 KO:K08955 OrthoDB:EOG4FR40W
EMBL:L14616 EMBL:X81067 EMBL:D16332 PIR:S54498 RefSeq:NP_015349.1
ProteinModelPortal:P32795 SMR:P32795 IntAct:P32795 STRING:P32795
PaxDb:P32795 PeptideAtlas:P32795 EnsemblFungi:YPR024W GeneID:856135
KEGG:sce:YPR024W CYGD:YPR024w OMA:SEFDEVY NextBio:981236
Genevestigator:P32795 GermOnline:YPR024W Uniprot:P32795
Length = 747
Score = 114 (45.2 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 33/105 (31%), Positives = 53/105 (50%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
FD + E + E+ E++ DF + Y+ G +G LL GPPGTGK+ + A A
Sbjct: 280 FDDVCGCDEARAEL-EEIVDFLKDPTKYESLGGKLPKGVLLTGPPGTGKTLLARATAGEA 338
Query: 262 GYDIYDL---ELTEVH---NNSELRKLLMKTSSKS--IIVIEDID 298
G D + + E EV+ +R L + S++ II I+++D
Sbjct: 339 GVDFFFMSGSEFDEVYVGVGAKRIRDLFAQARSRAPAIIFIDELD 383
Score = 61 (26.5 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 19/43 (44%), Positives = 21/43 (48%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
TL+ LL DG G I + TN E LD AL R GR D
Sbjct: 400 TLNQLLVELDGFSQTSGI--IIIGATNFPEALDKALTRPGRFD 440
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 96 (38.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 29/80 (36%), Positives = 39/80 (48%)
Query: 180 RGGSLDSRGHPWESVSFKHPST-FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKR 238
RGG L S G + + F +A E K+EIME + +F YQ G +
Sbjct: 276 RGGGLFSVGETTAKILKNNIDVRFADVAGCEEAKLEIMEFV-NFLKNPKQYQDLGAKIPK 334
Query: 239 GYLLYGPPGTGKSSMIAAMA 258
G +L GPPGTGK+ + A A
Sbjct: 335 GAMLTGPPGTGKTLLAKATA 354
Score = 80 (33.2 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 24/63 (38%), Positives = 33/63 (52%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G G +GG+ + TL+ +L DG S S + V TN + LDPAL R GR D
Sbjct: 409 GRGHLGGQSEQEN-TLNQMLVEMDGFNS---STNVVVLAGTNRPDILDPALTRPGRFDRQ 464
Query: 391 IFM 393
I++
Sbjct: 465 IYI 467
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 87 (35.7 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + K+ + TN + LDPALLR GR+D I + + A L +L
Sbjct: 256 TLMELLNQMDG-FDTLHRVKM-IMATNRPDTLDPALLRPGRLDRKIHIELPNEQARLDIL 313
Query: 406 KNYLG 410
K + G
Sbjct: 314 KIHSG 318
Score = 82 (33.9 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
+Q+ G +G LLYGPPGTGK+ + A+A+ L
Sbjct: 159 FQRVGIIPPKGCLLYGPPGTGKTLLARAVASQL 191
>DICTYBASE|DDB_G0293388 [details] [associations]
symbol:DDB_G0293388 "ATP-dependent metalloprotease"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008233 "peptidase activity"
evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0293388 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 EMBL:AAFI02000204
RefSeq:XP_629167.2 ProteinModelPortal:Q54BW7 STRING:Q54BW7
MEROPS:M41.A16 EnsemblProtists:DDB0304811 GeneID:8629188
KEGG:ddi:DDB_G0293388 InParanoid:Q54BW7 OMA:ICLAGRA Uniprot:Q54BW7
Length = 767
Score = 89 (36.4 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 32/109 (29%), Positives = 51/109 (46%)
Query: 199 PSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
P++FD + E K E+ E++ D+ + Y G +G LL G PGTGK+ + A+A
Sbjct: 296 PTSFDDVKGIQEVKEEL-EEIVDYLLHPTKYNSIGAKLPKGVLLSGEPGTGKTLLARAIA 354
Query: 259 NYLGYDI-------YDLELTEVHNNSELRKLLMKTSSKS--IIVIEDID 298
G +D + V + +R+L K II I++ID
Sbjct: 355 GEAGVSFLYTTGSSFDEKYVGV-GSRRVRELFNAAREKQPCIIFIDEID 402
Score = 87 (35.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 34/118 (28%), Positives = 47/118 (39%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LL DG S+ + + TN LDPALLR GR D HI + ++
Sbjct: 416 TLLQLLTEMDGFEG--NSQIMIIGATNAPNSLDPALLRPGRFDRHISVPIPDMKGRSEII 473
Query: 406 KNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCKAVRELLETLKVK 463
+YL G T AD+S ++ KAV+ ET+ +K
Sbjct: 474 DHYLKKVKHTVEVKADTIARATPG---FTGADLSNLI---NTAAIKAVQNGKETISIK 525
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 87 (35.7 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/62 (45%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG + G K+ + TN IE LDPAL+R GR+D
Sbjct: 291 RYDSNS-GGEREIQR-TMLELLNQLDG-FDDRGDVKV-IMATNKIETLDPALIRPGRIDR 346
Query: 390 HI 391
I
Sbjct: 347 KI 348
Score = 83 (34.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 29/98 (29%), Positives = 49/98 (50%)
Query: 210 EKKI-EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---I 265
E +I EI E ++ Y++ G +G +LYG PGTGK+ + A+AN I
Sbjct: 188 ESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQTSATFLRI 247
Query: 266 YDLELTEVH--NNSELRKLLMKTSSK---SIIVIEDID 298
EL + + + L + + K + + SI+ I++ID
Sbjct: 248 VGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEID 285
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 91 (37.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA--- 258
F +A E K+EIME + +F YQ G +G +L GPPGTGK+ + A A
Sbjct: 308 FKDVAGCEEAKLEIMEFV-NFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 366
Query: 259 NYLGYDIYDLELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
N + E E+ + +R L L + ++ I+ I++ID
Sbjct: 367 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID 411
Score = 85 (35.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G+ GG+ + TL+ LL DG + + + + TN + LDPAL+R GR D I
Sbjct: 418 GRGNFGGQSEQEN-TLNQLLVEMDGFNTT--TNVVILAGTNRPDILDPALMRPGRFDRQI 474
Query: 392 FM 393
F+
Sbjct: 475 FI 476
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 91 (37.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA--- 258
F +A E K+EIME + +F YQ G +G +L GPPGTGK+ + A A
Sbjct: 308 FKDVAGCEEAKLEIMEFV-NFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 366
Query: 259 NYLGYDIYDLELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
N + E E+ + +R L L + ++ I+ I++ID
Sbjct: 367 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID 411
Score = 85 (35.0 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G+ GG+ + TL+ LL DG + + + + TN + LDPAL+R GR D I
Sbjct: 418 GRGNFGGQSEQEN-TLNQLLVEMDGFNTT--TNVVILAGTNRPDILDPALMRPGRFDRQI 474
Query: 392 FM 393
F+
Sbjct: 475 FI 476
>FB|FBgn0024992 [details] [associations]
symbol:CG2658 species:7227 "Drosophila melanogaster"
[GO:0006508 "proteolysis" evidence=ISS] [GO:0005739 "mitochondrion"
evidence=ISS] [GO:0008237 "metallopeptidase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241 HSSP:Q9LCZ4
HOGENOM:HOG000226301 MEROPS:M41.A12 EMBL:AL023874
ProteinModelPortal:O76867 SMR:O76867 PaxDb:O76867 PRIDE:O76867
FlyBase:FBgn0024992 InParanoid:O76867 OrthoDB:EOG4V6WXK
ArrayExpress:O76867 Bgee:O76867 Uniprot:O76867
Length = 819
Score = 93 (37.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 26/65 (40%), Positives = 37/65 (56%)
Query: 330 RCGSGSVG-GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMD 388
R G+ S+G G G + TL+ LL DG+ + G + + +TN + LD ALLR GR D
Sbjct: 449 RSGTESMGQGSSGESEQTLNQLLVEMDGMATKEGV--LMLASTNRADILDKALLRPGRFD 506
Query: 389 MHIFM 393
HI +
Sbjct: 507 RHILI 511
Score = 83 (34.3 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
E K E+ E + D+ YQ+ G RG LL GPPG GK+ + A+A
Sbjct: 348 EAKQEVKEFV-DYLKSPEKYQRLGAKVPRGALLLGPPGCGKTLLAKAVA 395
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 96 (38.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 29/80 (36%), Positives = 39/80 (48%)
Query: 180 RGGSLDSRGHPWESVSFKHPST-FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKR 238
RGG L S G + + F +A E K+EIME + +F YQ G +
Sbjct: 248 RGGGLFSVGETTAKILKNNIDVRFADVAGCEEAKLEIMEFV-NFLKNPKQYQDLGAKIPK 306
Query: 239 GYLLYGPPGTGKSSMIAAMA 258
G +L GPPGTGK+ + A A
Sbjct: 307 GAMLTGPPGTGKTLLAKATA 326
Score = 79 (32.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 22/62 (35%), Positives = 33/62 (53%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G +GG+ + TL+ +L DG S + + + TN + LDPAL R GR D I
Sbjct: 381 GRGHLGGQSEQEN-TLNQMLVEMDGFNST--TNVVVLAGTNRPDILDPALTRPGRFDRQI 437
Query: 392 FM 393
++
Sbjct: 438 YI 439
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 87 (35.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRMDMH 390
G+G GG D TL+ +L DG G+E + V TN + LDPALLR GR D
Sbjct: 263 GAGMGGGHDEREQ-TLNQMLVEMDGFE---GNEGVIVIAATNRPDVLDPALLRPGRFDRQ 318
Query: 391 I 391
+
Sbjct: 319 V 319
Score = 87 (35.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/107 (29%), Positives = 51/107 (47%)
Query: 200 STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+TF +A E K ++ E L D+ S +QK G G LL G PGTGK+ + A+A
Sbjct: 151 TTFADVAGCDEAKEDVAE-LVDYLREPSRFQKLGGRIPSGILLVGQPGTGKTLLAKAIAG 209
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDID 298
+ + + E+ S +R + K ++ II I++ID
Sbjct: 210 EAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 256
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 91 (37.1 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
TL LLN DG + G KI + TN + LDPALLR+GR+D I
Sbjct: 295 TLMELLNQMDG-FDTLGQTKI-IMATNRPDTLDPALLRAGRLDRKI 338
Score = 77 (32.2 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLG 262
+ + G +G LLYGPPGTGK+ + A+A +G
Sbjct: 198 FTRVGIKPPKGVLLYGPPGTGKTLLAKAVAATIG 231
Score = 39 (18.8 bits), Expect = 0.00011, Sum P(3) = 0.00011
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 107 SFNGVGVLWEHVVSPRQ 123
SFNG+G L E + R+
Sbjct: 170 SFNGIGGLTEQIRELRE 186
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 92 (37.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG S G K+ + TN IE LDPALLR GR+D I
Sbjct: 311 TMLELLNQLDGFDSR-GDVKV-ILATNRIESLDPALLRPGRIDRKI 354
Score = 77 (32.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLELTEVH--NNSELRKLL 283
Y+ G +G +LYG PGTGK+ + A+AN + EL + + + +L + L
Sbjct: 214 YEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVREL 273
Query: 284 MKTS---SKSIIVIEDID 298
+ + S SI+ I++ID
Sbjct: 274 FRVADDLSPSIVFIDEID 291
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 92 (37.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/46 (52%), Positives = 28/46 (60%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG S G K+ + TN IE LDPALLR GR+D I
Sbjct: 311 TMLELLNQLDGFDSR-GDVKV-ILATNRIESLDPALLRPGRIDRKI 354
Score = 77 (32.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 24/78 (30%), Positives = 41/78 (52%)
Query: 229 YQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLELTEVH--NNSELRKLL 283
Y+ G +G +LYG PGTGK+ + A+AN + EL + + + +L + L
Sbjct: 214 YEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTSATFLRVVGSELIQKYLGDGPKLVREL 273
Query: 284 MKTS---SKSIIVIEDID 298
+ + S SI+ I++ID
Sbjct: 274 FRVADDLSPSIVFIDEID 291
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 97 (39.2 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 34/104 (32%), Positives = 55/104 (52%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLG 262
D +D +K+ EI E ++ Y++ G RG LLYGPPGTGK+ ++ A+AN
Sbjct: 173 DVGGLDMQKQ-EIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTK 231
Query: 263 YDIYDLELTE-VHNN-SE----LRKL--LMKTSSKSIIVIEDID 298
+ +E VH E +R + L + ++ SII I+++D
Sbjct: 232 AAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVD 275
Score = 71 (30.1 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 21/54 (38%), Positives = 27/54 (50%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G D L LL DG + + K+ + TN + LDPALLR GR+D I
Sbjct: 287 GSDREVQRILIELLTQMDG-FDQSTNVKV-IMATNRADTLDPALLRPGRLDRKI 338
>TAIR|locus:2138146 [details] [associations]
symbol:FtsHi1 "FTSH inactive protease 1" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008237 "metallopeptidase
activity" evidence=ISS] [GO:0009658 "chloroplast organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0009941 "chloroplast
envelope" evidence=IDA] [GO:0007020 "microtubule nucleation"
evidence=RCA] [GO:0010020 "chloroplast fission" evidence=IMP]
[GO:0009536 "plastid" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 Pfam:PF01434
SMART:SM00382 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0051301 GO:GO:0006508 GO:GO:0009941 GO:GO:0004222
eggNOG:COG0465 GO:GO:0017111 GO:GO:0010020 EMBL:AC002343
EMBL:AL078468 EMBL:AL161560 HSSP:Q9LCZ4 IPI:IPI00537043 PIR:T08913
RefSeq:NP_567691.1 UniGene:At.3392 ProteinModelPortal:O22993
SMR:O22993 PaxDb:O22993 PRIDE:O22993 EnsemblPlants:AT4G23940.1
GeneID:828494 KEGG:ath:AT4G23940 TAIR:At4g23940
HOGENOM:HOG000029491 InParanoid:O22993 OMA:QMAGSEF PhylomeDB:O22993
ProtClustDB:CLSN2689578 ArrayExpress:O22993 Genevestigator:O22993
Uniprot:O22993
Length = 946
Score = 99 (39.9 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 30/104 (28%), Positives = 49/104 (47%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLG 262
D ID + ++ +++L + + K G G LL GPPG GK+ + A+A G
Sbjct: 431 DVAGID--EAVDELQELVKYLKNPDLFDKMGIKPPHGVLLEGPPGCGKTLVAKAIAGEAG 488
Query: 263 YDIYDL---ELTEVH---NNSELRKLLM--KTSSKSIIVIEDID 298
Y + E EV ++ +R L K + S+I I++ID
Sbjct: 489 VPFYQMAGSEFVEVLVGVGSARIRDLFKRAKVNKPSVIFIDEID 532
Score = 77 (32.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/46 (47%), Positives = 26/46 (56%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
TL+ LL DG + G IF+ TN + LDPALLR GR D I
Sbjct: 560 TLNQLLIELDGFDT--GKGVIFLGATNRRDLLDPALLRPGRFDRKI 603
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 91 (37.1 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA--- 258
F +A E K+EIME + +F YQ G +G +L GPPGTGK+ + A A
Sbjct: 306 FKDVAGCEEAKLEIMEFV-NFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 364
Query: 259 NYLGYDIYDLELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
N + E E+ + +R L L + ++ I+ I++ID
Sbjct: 365 NVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID 409
Score = 87 (35.7 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G+ GG+ + TL+ LL DG + + + + TN + LDPALLR GR D I
Sbjct: 416 GRGNFGGQSEQEN-TLNQLLVEMDGFNTT--TNVVILAGTNRPDILDPALLRPGRFDRQI 472
Query: 392 FM 393
F+
Sbjct: 473 FI 474
Score = 38 (18.4 bits), Expect = 0.00014, Sum P(3) = 0.00014
Identities = 6/18 (33%), Positives = 13/18 (72%)
Query: 477 NSDYEEEEQEKRALESPI 494
N + E+EE++++ E P+
Sbjct: 779 NKEREKEEKKEKEKEEPL 796
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 89 (36.4 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL LLN DG + G KI + TN + LDPALLR GR+D I + + + +L
Sbjct: 255 TLMELLNQMDG-FDYLGQTKI-IMATNRPDTLDPALLRPGRLDRKIEIPLPNEVGRMEIL 312
Query: 406 KNYL 409
K +L
Sbjct: 313 KIHL 316
Score = 78 (32.5 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/25 (60%), Positives = 19/25 (76%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLG 262
+G LLYGPPGTGK+ + A+A LG
Sbjct: 167 KGVLLYGPPGTGKTLLARAVAASLG 191
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 91 (37.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 211 KKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
+K EI E ++ Y++ G RG LLYGPPGTGK+ + A+AN+
Sbjct: 163 QKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVANH 212
Score = 76 (31.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 22/54 (40%), Positives = 27/54 (50%)
Query: 338 GEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G D L LLN DG + K+ + TN + LDPALLR GR+D I
Sbjct: 270 GADREVQRILMELLNQMDGFDQTV-NVKV-IMATNRADTLDPALLRPGRLDRKI 321
>UNIPROTKB|J9NWA6 [details] [associations]
symbol:LOC100687152 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AAEX03026457 Ensembl:ENSCAFT00000026372 OMA:REAVEQP
Uniprot:J9NWA6
Length = 434
Score = 86 (35.3 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 38/148 (25%), Positives = 67/148 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 141 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 198
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 199 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 258
Query: 276 NSELRK---LLMKTSSKSIIVIEDIDCS 300
++L + L K + SII I+++D +
Sbjct: 259 GAKLVRDAFALAKEKAPSIIFIDELDAT 286
Score = 82 (33.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG ++ + TN ++ LDPALLRSGR+D I
Sbjct: 304 TMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDQKI 347
>WB|WBGene00004502 [details] [associations]
symbol:rpt-2 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0031625 "ubiquitin protein ligase
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0000003 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER EMBL:FO080494 PIR:T31800
RefSeq:NP_504558.1 ProteinModelPortal:O16368 SMR:O16368
IntAct:O16368 MINT:MINT-210699 STRING:O16368 PaxDb:O16368
PRIDE:O16368 EnsemblMetazoa:F29G9.5.1 EnsemblMetazoa:F29G9.5.2
GeneID:178988 KEGG:cel:CELE_F29G9.5 UCSC:F29G9.5 CTD:178988
WormBase:F29G9.5 GeneTree:ENSGT00550000074818 InParanoid:O16368
NextBio:903424 Uniprot:O16368
Length = 443
Score = 89 (36.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 29/62 (46%), Positives = 34/62 (54%)
Query: 330 RCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDM 389
R S S GGE T+ LLN DG S G K+ + TN IE LDPAL+R GR+D
Sbjct: 297 RYDSNS-GGEREIQR-TMLELLNQLDGFDSR-GDVKVLM-ATNRIESLDPALIRPGRIDR 352
Query: 390 HI 391
I
Sbjct: 353 KI 354
Score = 79 (32.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 228 FYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYD---IYDLELTEVH---NNSELRK 281
+Y++ G +G +LYG PGTGK+ + A+AN I EL + + +R+
Sbjct: 213 YYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQKYLGDGPKMVRE 272
Query: 282 L--LMKTSSKSIIVIEDID 298
L + + ++ SI+ I++ID
Sbjct: 273 LFRVAEENAPSIVFIDEID 291
>UNIPROTKB|E1C6S3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 Pfam:PF04212 GO:GO:0008568
GeneTree:ENSGT00570000078874 IPI:IPI00599182 EMBL:AADN02011792
EMBL:AADN02011793 Ensembl:ENSGALT00000017279 ArrayExpress:E1C6S3
Uniprot:E1C6S3
Length = 592
Score = 88 (36.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 232 TG-RAWKRGYLLYGPPGTGKSSM---IAAMANYLGYDIYDLELTE--VHNNSELRKLLMK 285
TG RA RG LL+GPPG GK+ + +AA +N ++I LT V +L + L
Sbjct: 345 TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFA 404
Query: 286 TSSK---SIIVIEDID 298
+ + SII I+++D
Sbjct: 405 VARELQPSIIFIDEVD 420
Score = 83 (34.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 337 GGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFMSY 395
G D + + L+ F DG+ S G ++I V TN ++LD A+LR R +++S
Sbjct: 429 GEHDASRRLKTEFLIEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFTKRVYVSL 484
Query: 396 CSYPALLILLKNYL 409
+ LILLKN L
Sbjct: 485 PNEETRLILLKNLL 498
>UNIPROTKB|F1NCJ3 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001578 "microtubule
bundle formation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IEA]
[GO:0007109 "cytokinesis, completion of separation" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0048487
"beta-tubulin binding" evidence=IEA] [GO:0051013 "microtubule
severing" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0005768
GO:GO:0051260 Pfam:PF04212 GO:GO:0006888 GO:GO:0030496
GO:GO:0007109 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0034214 GeneTree:ENSGT00570000078874
OMA:HKSTPKT EMBL:AADN02011792 EMBL:AADN02011793 IPI:IPI00821045
Ensembl:ENSGALT00000037930 ArrayExpress:F1NCJ3 Uniprot:F1NCJ3
Length = 600
Score = 88 (36.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 232 TG-RAWKRGYLLYGPPGTGKSSM---IAAMANYLGYDIYDLELTE--VHNNSELRKLLMK 285
TG RA RG LL+GPPG GK+ + +AA +N ++I LT V +L + L
Sbjct: 353 TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFA 412
Query: 286 TSSK---SIIVIEDID 298
+ + SII I+++D
Sbjct: 413 VARELQPSIIFIDEVD 428
Score = 83 (34.3 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 337 GGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFMSY 395
G D + + L+ F DG+ S G ++I V TN ++LD A+LR R +++S
Sbjct: 437 GEHDASRRLKTEFLIEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFTKRVYVSL 492
Query: 396 CSYPALLILLKNYL 409
+ LILLKN L
Sbjct: 493 PNEETRLILLKNLL 506
>UNIPROTKB|Q5ZK92 [details] [associations]
symbol:SPAST "Spastin" species:9031 "Gallus gallus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0043014
"alpha-tubulin binding" evidence=ISS] [GO:0048487 "beta-tubulin
binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0051260 "protein homooligomerization" evidence=ISS] [GO:0001578
"microtubule bundle formation" evidence=ISS] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR017179 Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0007399 GO:GO:0030154 GO:GO:0051301
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0048487 GO:GO:0008017 HSSP:O75351
GO:GO:0008568 GO:GO:0001578 GO:GO:0051013 GO:GO:0005874
GO:GO:0043014 SMART:SM00745 GO:GO:0034214 HOGENOM:HOG000225146
KO:K13254 HAMAP:MF_03021 CTD:6683 HOVERGEN:HBG108502
OrthoDB:EOG4NZTTF EMBL:EU849599 EMBL:EU849600 EMBL:AJ720192
IPI:IPI00599182 IPI:IPI00923811 RefSeq:NP_001026232.1
UniGene:Gga.21964 ProteinModelPortal:Q5ZK92 SMR:Q5ZK92
STRING:Q5ZK92 GeneID:421481 KEGG:gga:421481 InParanoid:Q5ZK92
NextBio:20824244 Uniprot:Q5ZK92
Length = 613
Score = 88 (36.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 232 TG-RAWKRGYLLYGPPGTGKSSM---IAAMANYLGYDIYDLELTE--VHNNSELRKLLMK 285
TG RA RG LL+GPPG GK+ + +AA +N ++I LT V +L + L
Sbjct: 366 TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFA 425
Query: 286 TSSK---SIIVIEDID 298
+ + SII I+++D
Sbjct: 426 VARELQPSIIFIDEVD 441
Score = 83 (34.3 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 337 GGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFMSY 395
G D + + L+ F DG+ S G ++I V TN ++LD A+LR R +++S
Sbjct: 450 GEHDASRRLKTEFLIEF-DGVQSS-GEDRILVMGATNRPQELDDAVLR--RFTKRVYVSL 505
Query: 396 CSYPALLILLKNYL 409
+ LILLKN L
Sbjct: 506 PNEETRLILLKNLL 519
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 85 (35.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 92 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 149
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 150 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 209
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 210 GAKLVRDAFALAKEKAPSIIFIDELD 235
Score = 81 (33.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG ++ + TN ++ LDPALLRSGR+D I
Sbjct: 255 TMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRKI 298
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 85 (35.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 96 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 153
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 154 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 213
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 214 GAKLVRDAFALAKEKAPSIIFIDELD 239
Score = 81 (33.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG ++ + TN ++ LDPALLRSGR+D I
Sbjct: 259 TMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRKI 302
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 85 (35.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 104 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 161
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 162 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 221
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 222 GAKLVRDAFALAKEKAPSIIFIDELD 247
Score = 81 (33.6 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG ++ + TN ++ LDPALLRSGR+D I
Sbjct: 267 TMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRKI 310
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 91 (37.1 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 33/105 (31%), Positives = 51/105 (48%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA--- 258
F +A E K+EIME + +F YQ G +G +L GPPGTGK+ + A A
Sbjct: 302 FKDVAGCEEAKLEIMEFV-NFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 360
Query: 259 NYLGYDIYDLELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
N + E E+ + +R L L + ++ I+ I++ID
Sbjct: 361 NVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEID 405
Score = 82 (33.9 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G+ GG+ + TL+ LL DG + + + + TN + LDPAL+R GR D I
Sbjct: 412 GRGNFGGQSEQEN-TLNQLLVEMDGFNTA--TNVVVLAGTNRPDILDPALMRPGRFDRQI 468
Query: 392 FM 393
++
Sbjct: 469 YI 470
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 93 (37.8 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 25/69 (36%), Positives = 39/69 (56%)
Query: 238 RGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRKLLMKT--SSK 289
+G LLYGPPG+GK+ + A+AN G + + E+ + S LRK + ++
Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301
Query: 290 SIIVIEDID 298
SII I++ID
Sbjct: 302 SIIFIDEID 310
Score = 78 (32.5 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 39/157 (24%), Positives = 65/157 (41%)
Query: 335 SVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFM 393
S G G L+ LL DG+ + + +F+ TN + +D ALLR GR+D I++
Sbjct: 592 SAGDAGGAADRVLNQLLTEMDGMNA---KKTVFIIGATNRPDIIDSALLRPGRLDQLIYI 648
Query: 394 SYCSYPALLILLKNYLGYXXXXXXXXXXXXXXXVVGKAEMTPADISEVLIKNKRDKCK-A 452
+ L + K L G + ADI+E+ + CK A
Sbjct: 649 PLPDEDSRLNIFKACLRKSPVAKDVDVTALAKYTQG---FSGADITEICQR----ACKYA 701
Query: 453 VRELLETLKVKAEKNVKHGGIIVKNSDYEEEEQEKRA 489
+RE +E ++ E+ ++ ++E E RA
Sbjct: 702 IRENIEK-DIENERRRSQNPEAMEEDMVDDEVSEIRA 737
Score = 43 (20.2 bits), Expect = 0.00021, Sum P(3) = 0.00021
Identities = 13/52 (25%), Positives = 25/52 (48%)
Query: 166 IRRKNQDRL--LYTNSRGGSLDSRGHPWESVSF--KHPSTFDTLAIDPEKKI 213
++R++++RL + + GG E V +HP F ++ + P K I
Sbjct: 193 VKREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGI 244
>ASPGD|ASPL0000029469 [details] [associations]
symbol:AN5588 species:162425 "Emericella nidulans"
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006457 "protein
folding" evidence=IEA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0031942 "i-AAA
complex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01241 OMA:SEFDEVY EnsemblFungi:CADANIAT00003489
Uniprot:C8VG17
Length = 784
Score = 100 (40.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 32/97 (32%), Positives = 48/97 (49%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL- 268
E K E+ E L +F + G +G LL GPPGTGK+ + A+A G + +
Sbjct: 322 EAKDELQE-LVEFLLNPERFSSLGGKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFYMS 380
Query: 269 --ELTEVH---NNSELRKLLMKTSSKS--IIVIEDID 298
E EV+ +R+L + SKS II I+++D
Sbjct: 381 GSEFDEVYVGVGAKRVRELFNQARSKSPAIIFIDELD 417
Score = 72 (30.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 21/64 (32%), Positives = 31/64 (48%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILL 405
TL+ LL DG G I + TN+ E LD AL R GR D + + + +L
Sbjct: 434 TLNQLLTELDGFSQSTGV--IILAATNYPELLDKALTRPGRFDRKVVVDLPDVRGRMDIL 491
Query: 406 KNYL 409
K+++
Sbjct: 492 KHHM 495
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 88 (36.0 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 331 CGSGSVGGEDGNNSIT--LSGLLNFTDGLWSCCGSEKIFVFT-TNHIEKLDPALLRSGRM 387
C S GG DGNNS T ++ LL DG+ G +++ TN + +DPA+LR GR+
Sbjct: 768 CPKRSDGG-DGNNSGTRIVNQLLTEMDGVEERKG---VYILAATNRPDIIDPAILRPGRL 823
Query: 388 DMHIFMSY 395
D +++ +
Sbjct: 824 DTILYVGF 831
Score = 88 (36.0 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 33/112 (29%), Positives = 57/112 (50%)
Query: 197 KHPS-TF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMI 254
+HP+ +F D +D K E+ E L + FY + G RG LL+GPPG GK+ +
Sbjct: 244 QHPTESFRDIGGMDSTLK-ELCEMLIHIKSP-EFYFQLGLLPSRGLLLHGPPGCGKTFLA 301
Query: 255 AAMANYLGYDIYDLELTE----VHNNSE--LRKLLMKTSSKS--IIVIEDID 298
A++ L + ++ TE + SE +R++ + S ++ I++ID
Sbjct: 302 RAISGQLKMPLMEIPATELIGGISGESEERIREVFDQAIGYSPCVLFIDEID 353
Score = 40 (19.1 bits), Expect = 0.00024, Sum P(3) = 0.00024
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 140 TLRIKKKDKSLILDSYLDFIMEKANDIRRK 169
T+R+KK + I ++YLD + + ++ +K
Sbjct: 14 TIRVKKYLEEHIGETYLD-VKQMTRELMQK 42
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 88 (36.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 32/105 (30%), Positives = 51/105 (48%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA--- 258
F +A E K+EIME + +F Y+ G +G +L GPPGTGK+ + A A
Sbjct: 151 FKDVAGCEEAKLEIMEFV-NFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAGEA 209
Query: 259 NYLGYDIYDLELTEVH---NNSELRKL--LMKTSSKSIIVIEDID 298
N + E E+ + +R L L + ++ I+ I++ID
Sbjct: 210 NVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEID 254
Score = 82 (33.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 332 GSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
G G+ GG+ + TL+ LL DG + + + + TN + LDPAL+R GR D I
Sbjct: 261 GRGNFGGQSEQEN-TLNQLLVEMDGFNTT--TNVVILAGTNRPDILDPALMRPGRFDRQI 317
Query: 392 FM 393
++
Sbjct: 318 YI 319
>UNIPROTKB|F1S3Z2 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051013
"microtubule severing" evidence=IEA] [GO:0048487 "beta-tubulin
binding" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0007109 "cytokinesis, completion of separation"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 OMA:HKSTPKT EMBL:FP583344
EMBL:CU694619 Ensembl:ENSSSCT00000009321 Uniprot:F1S3Z2
Length = 479
Score = 88 (36.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 28/76 (36%), Positives = 42/76 (55%)
Query: 232 TG-RAWKRGYLLYGPPGTGKSSM---IAAMANYLGYDIYDLELTE--VHNNSELRKLLMK 285
TG RA RG LL+GPPG GK+ + +AA +N ++I LT V +L + L
Sbjct: 283 TGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFA 342
Query: 286 TSSK---SIIVIEDID 298
+ + SII I+++D
Sbjct: 343 VARELQPSIIFIDEVD 358
Score = 79 (32.9 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 24/74 (32%), Positives = 39/74 (52%)
Query: 337 GGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFMSY 395
G D + + L+ F DG+ S G +++ V TN ++LD A+LR R +++S
Sbjct: 367 GEHDASRRLKTEFLIEF-DGVQSA-GDDRVLVMGATNRPQELDEAVLR--RFIKRVYVSL 422
Query: 396 CSYPALLILLKNYL 409
+ L+LLKN L
Sbjct: 423 PNEETRLLLLKNLL 436
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 85 (35.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 146 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 203
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 204 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 263
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 264 GAKLVRDAFALAKEKAPSIIFIDELD 289
Score = 81 (33.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG ++ + TN ++ LDPALLRSGR+D I
Sbjct: 309 TMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRKI 352
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 85 (35.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 146 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 203
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 204 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 263
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 264 GAKLVRDAFALAKEKAPSIIFIDELD 289
Score = 81 (33.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG ++ + TN ++ LDPALLRSGR+D I
Sbjct: 309 TMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRKI 352
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 85 (35.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 146 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 203
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 204 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 263
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 264 GAKLVRDAFALAKEKAPSIIFIDELD 289
Score = 81 (33.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG ++ + TN ++ LDPALLRSGR+D I
Sbjct: 309 TMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRKI 352
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 85 (35.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 149 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 206
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 207 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 266
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 267 GAKLVRDAFALAKEKAPSIIFIDELD 292
Score = 81 (33.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG ++ + TN ++ LDPALLRSGR+D I
Sbjct: 312 TMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRKI 355
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 85 (35.0 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 149 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 206
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 207 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 266
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 267 GAKLVRDAFALAKEKAPSIIFIDELD 292
Score = 81 (33.6 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG ++ + TN ++ LDPALLRSGR+D I
Sbjct: 312 TMLELLNQLDGFQP--NTQVKVIAATNRVDILDPALLRSGRLDRKI 355
>UNIPROTKB|O42586 [details] [associations]
symbol:psmc3-b "26S protease regulatory subunit 6A-B"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 EMBL:Y10460 UniGene:Xl.113 ProteinModelPortal:O42586
Xenbase:XB-GENE-1009853 Uniprot:O42586
Length = 404
Score = 84 (34.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 38/146 (26%), Positives = 66/146 (45%)
Query: 162 KANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKI-EIMEDLK 220
K D+ N+D L + DSR E V + + + +K+I E++E +
Sbjct: 111 KPGDLVGVNKDSYLILETLPTEYDSRVKAME-VDERPTEQYSDIG-GLDKQIQELVEAIV 168
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTE--VHN 275
N ++ G +G L+YGPPGTGK+ + A A L +L + + +
Sbjct: 169 LPMNHKEKFENLGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGD 228
Query: 276 NSELRK---LLMKTSSKSIIVIEDID 298
++L + L K + SII I+++D
Sbjct: 229 GAKLVRDAFSLAKEKAPSIIFIDELD 254
Score = 81 (33.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 346 TLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHI 391
T+ LLN DG K+ + TN ++ LDPALLRSGR+D I
Sbjct: 274 TMLELLNQLDGFQPTT-QVKV-IAATNRVDILDPALLRSGRLDRKI 317
WARNING: HSPs involving 37 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.136 0.400 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 517 464 0.00097 118 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 287
No. of states in DFA: 617 (66 KB)
Total size of DFA: 294 KB (2153 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.98u 0.16s 41.14t Elapsed: 00:00:02
Total cpu time: 41.02u 0.16s 41.18t Elapsed: 00:00:02
Start: Mon May 20 23:35:28 2013 End: Mon May 20 23:35:30 2013
WARNINGS ISSUED: 2