BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010133
(517 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54DY9|BCS1B_DICDI Probable mitochondrial chaperone BCS1-B OS=Dictyostelium discoideum
GN=bcsl1b PE=3 SV=1
Length = 458
Score = 135 bits (341), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 159/308 (51%), Gaps = 23/308 (7%)
Query: 159 IMEKANDIR-RKNQDRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIME 217
++E+A ++ K + + L S G GHP K P ++ +D K I++
Sbjct: 168 LIEEAKEMALEKEEGKTLIYTSMGTDWRRFGHPRR----KRP--ISSVILDKGKSELIIQ 221
Query: 218 DLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELT-EVHNN 276
D+K F N +Y G ++RGYLLYGPPGTGKSS I A+A L I L L + ++
Sbjct: 222 DVKKFLNNSDWYNDRGIPYRRGYLLYGPPGTGKSSFITALAGELQLSICILNLAGKSVSD 281
Query: 277 SELRKLLMKTSSKSIIVIEDIDCSISLSNRN--KRSNGSGSRGNCGNGNYYEPEMRCGSG 334
+ L +LL +SII++EDID +I N + +SN + + G Y+ S
Sbjct: 282 TSLNQLLATAPQRSIILLEDIDSAIQTGNHDLSAKSNSANAPSISSGGLQYQGYYGNPSV 341
Query: 335 SVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMS 394
S GG +++T SGLLN DG+ + G +I TTNH+EKLD L+R GR+D+ I +
Sbjct: 342 SSGG----SALTFSGLLNALDGVAASEG--RILFMTTNHLEKLDKVLIRPGRVDLQIEIG 395
Query: 395 YC-SYPALLILLKNYLGYEESDLEDETLKELEDVVGKAEMTPADISEVLIKNKRDKCKAV 453
C SY + LK Y + DL + +++LE+ + +PA + + + +A+
Sbjct: 396 LCSSYQMEQMFLKFYP--TDFDLAKQFVEKLENY----KFSPAQLQAYFMTYSNNSIEAI 449
Query: 454 RELLETLK 461
L E +K
Sbjct: 450 NNLNELIK 457
>sp|Q9P6Q3|BCS1_SCHPO Probable mitochondrial chaperone bcs1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC644.07 PE=2 SV=1
Length = 449
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/262 (30%), Positives = 123/262 (46%), Gaps = 40/262 (15%)
Query: 196 FKHPST---FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSS 252
F HP + ++ ++ K I +D+ DF +Y G ++RGYLLYGPPG+GK+S
Sbjct: 198 FGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDTRGIPYRRGYLLYGPPGSGKTS 257
Query: 253 MIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVIEDIDCSISLSNRNKRSN 311
+ A+A L YDI L L E + L LL K+++++ED+D + R
Sbjct: 258 FLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKAVVLLEDVDSAFQGRER----- 312
Query: 312 GSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTT 371
SG VG + ++T SGLLN DG+ S E+I TT
Sbjct: 313 ---------------------SGEVG---FHANVTFSGLLNALDGVTSS--DERIIFMTT 346
Query: 372 NHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYEESDLEDETLKELEDVVGKA 431
NH EKLDPAL+R GR+D+ ++ + + + + G+ E +L D+V
Sbjct: 347 NHPEKLDPALVRPGRVDVKAYLGNATPEQVREMFTRFYGHSP-----EMADDLSDIVCPK 401
Query: 432 EMTPADISEVLIKNKRDKCKAV 453
+ A + + + NK AV
Sbjct: 402 NTSMASLQGLFVMNKSSPADAV 423
>sp|P32839|BCS1_YEAST Mitochondrial chaperone BCS1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BCS1 PE=1 SV=2
Length = 456
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 100/302 (33%), Positives = 148/302 (49%), Gaps = 54/302 (17%)
Query: 140 TLRIKKKDKSLILDSYLDFIMEKANDIRRKNQD--RLLYTNSRGGSLDSRGHPWESVSFK 197
TL +DK L D I+ +A DI K + ++YT S G G P K
Sbjct: 173 TLTTLYRDKHL-----FDDILNEAKDIALKTTEGKTVIYT-SFGPEWRKFGQP------K 220
Query: 198 HPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAM 257
++ +D K I++D+ DF +Y G ++RGYLLYGPPG+GK+S I A+
Sbjct: 221 AKRMLPSVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQAL 280
Query: 258 ANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSR 316
A L Y+I L L+E + + L L+ +SI+++EDID + NKRS
Sbjct: 281 AGELDYNICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAF-----NKRSQ----- 330
Query: 317 GNCGNGNYYEPEMRCGSGSVGGEDG-NNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIE 375
GE G ++S+T SGLLN DG+ S E I TTNH E
Sbjct: 331 --------------------TGEQGFHSSVTFSGLLNALDGVTSS--EETITFMTTNHPE 368
Query: 376 KLDPALLRSGRMDMHIFMSYCS-YPALLILLKNYLGYEESDLEDE---TLKELEDVVGKA 431
KLD A++R GR+D +F+ + Y + +K Y G E+D+ + ++KEL+ V A
Sbjct: 369 KLDAAIMRPGRIDYKVFVGNATPYQVEKMFMKFYPG--ETDICKKFVNSVKELDITVSTA 426
Query: 432 EM 433
++
Sbjct: 427 QL 428
>sp|Q7ZV60|BCS1_DANRE Mitochondrial chaperone BCS1 OS=Danio rerio GN=bcs1l PE=2 SV=2
Length = 420
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 122/245 (49%), Gaps = 29/245 (11%)
Query: 215 IMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH 274
I++D+K+F +Y G ++RGYLLYGPPG GKSS I A+A LGY I + L++
Sbjct: 201 IVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELGYSICLMSLSDRS 260
Query: 275 -NNSELRKLLMKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCGS 333
++ L LL +SII++ED+D + SR N P G
Sbjct: 261 LSDDRLNHLLSVAPQQSIILLEDVDAAFV------------SRELLPTEN---PLAYQGM 305
Query: 334 GSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFM 393
G +T SGLLN DG+ +I TTN IE+LDPAL+R GR+D+ ++
Sbjct: 306 G---------RLTFSGLLNALDGV--ASSEARIVFMTTNFIERLDPALVRPGRVDLKQYV 354
Query: 394 SYCSYPALLILLKNYLGYEESDLEDETLKELEDVVGKAEMTPADISEVLIKNKRDKCKAV 453
+CS+ L + + + +ES E + E + + +++ A + + K D A+
Sbjct: 355 GHCSHWQLTQMFRRFYP-QESAAEADHFSE-QALAAHTDLSAAQVQGHFMLYKTDPAGAI 412
Query: 454 RELLE 458
+ + E
Sbjct: 413 KNIAE 417
>sp|Q7ZTL7|BCS1_XENLA Mitochondrial chaperone BCS1 OS=Xenopus laevis GN=bcs1l PE=2 SV=1
Length = 419
Score = 106 bits (265), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 35/241 (14%)
Query: 159 IMEKANDIRRKNQ-DRLLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIME 217
I+++A ++ K Q + + N+ G G P + ++ ++ +I++
Sbjct: 150 ILQEARELALKQQVGKTVMYNAVGAEWRQFGFP------RRRRPLSSVVLEQGISEKIVQ 203
Query: 218 DLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDI-YDLELTEVHNN 276
D+K F +Y G ++RGYLLYGPPG GKSS I A+A L Y I ++
Sbjct: 204 DVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELEYSICLMSLSDSSLSD 263
Query: 277 SELRKLLMKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCGSGSV 336
L LL +SII++ED+D + + NK+ N Y+
Sbjct: 264 DRLNHLLSVAPQQSIILLEDVDAAFVSRDLNKQ-----------NPTAYQ---------- 302
Query: 337 GGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYC 396
G +T SGLLN DG+ S +I TTNHI++LDPAL+R GR+D+ ++ +C
Sbjct: 303 ----GMGRLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHC 356
Query: 397 S 397
+
Sbjct: 357 T 357
>sp|Q9CZP5|BCS1_MOUSE Mitochondrial chaperone BCS1 OS=Mus musculus GN=Bcs1l PE=1 SV=1
Length = 418
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 131/276 (47%), Gaps = 32/276 (11%)
Query: 188 GHPWESVSF-KHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPP 246
G W + + + D++ + I++D+++F + +Y G ++RGYLLYGPP
Sbjct: 173 GSEWRTFGYPRRRRPLDSVVLQQGLADRIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPP 232
Query: 247 GTGKSSMIAAMANYLGYDI-YDLELTEVHNNSELRKLLMKTSSKSIIVIEDIDCSISLSN 305
G GKSS I A+A L + I ++ L LL +S++++ED+D + LS
Sbjct: 233 GCGKSSFITALAGELEHSICLLSLTDSSLSDDRLNHLLSVAPQQSLVLLEDVDAAF-LSR 291
Query: 306 RNKRSNGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEK 365
N P G G +T SGLLN DG+ S +
Sbjct: 292 DLAVEN---------------PIKYQGLG---------RLTFSGLLNALDGVAST--EAR 325
Query: 366 IFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYEESDLEDETLKELE 425
I TTN+I++LDPAL+R GR+D+ ++ YCS+ L + + + + L + + +
Sbjct: 326 IVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLAENFAEHV- 384
Query: 426 DVVGKAEMTPADISEVLIKNKRDKCKAVRELLETLK 461
+ +E++PA + + K D AV +E+L+
Sbjct: 385 -LKATSEISPAQVQGYFMLYKNDPMGAVHN-IESLR 418
>sp|Q9Y276|BCS1_HUMAN Mitochondrial chaperone BCS1 OS=Homo sapiens GN=BCS1L PE=1 SV=1
Length = 419
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 115/241 (47%), Gaps = 30/241 (12%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDI-YDLELTE 272
I+ D+++F + +Y G ++RGYLLYGPPG GKSS I A+A L + I
Sbjct: 200 RIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDS 259
Query: 273 VHNNSELRKLLMKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCG 332
++ L LL +S++++ED+D + LS N P G
Sbjct: 260 SLSDDRLNHLLSVAPQQSLVLLEDVDAAF-LSRDLAVEN---------------PVKYQG 303
Query: 333 SGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIF 392
G +T SGLLN DG+ S +I TTNH+++LDPAL+R GR+D+ +
Sbjct: 304 LG---------RLTFSGLLNALDGVAST--EARIVFMTTNHVDRLDPALIRPGRVDLKEY 352
Query: 393 MSYCSYPALLILLKNYLGYEESDLEDETLKELEDVVGKAEMTPADISEVLIKNKRDKCKA 452
+ YCS+ L + + + + L + + + + +++PA + + K D A
Sbjct: 353 VGYCSHWQLTQMFQRFYPGQAPSLAENFAEHV--LRATNQISPAQVQGYFMLYKNDPVGA 410
Query: 453 V 453
+
Sbjct: 411 I 411
>sp|Q5E9H5|BCS1_BOVIN Mitochondrial chaperone BCS1 OS=Bos taurus GN=BCS1L PE=2 SV=1
Length = 419
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 117/244 (47%), Gaps = 34/244 (13%)
Query: 214 EIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDI-YDLELTE 272
I+ D+++F + +Y G ++RGYLLYGPPG GKSS I A+A L + I
Sbjct: 200 RIVRDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELQHSICLLSLTDS 259
Query: 273 VHNNSELRKLLMKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCG 332
++ L LL +S++++ED+D + LS N P G
Sbjct: 260 SLSDDRLNHLLSVAPQQSLVLLEDVDAAF-LSRDLAAEN---------------PIKYQG 303
Query: 333 SGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIF 392
G +T SGLLN DG+ S +I TTNHI++LDPAL+R GR+DM +
Sbjct: 304 LG---------RLTFSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDMKEY 352
Query: 393 MSYCSYPALLILLKNYLGYEESDLEDETLKELEDVVGKA--EMTPADISEVLIKNKRDKC 450
+ +CS L + + + + + L + D V +A +++PA + + K D
Sbjct: 353 VGHCSRWQLTQMFQRFYPGQATSLAE----NFADRVLQATTQISPAQVQGYFMLYKNDPA 408
Query: 451 KAVR 454
A++
Sbjct: 409 GAIQ 412
>sp|Q54HY8|BCS1A_DICDI Probable mitochondrial chaperone BCS1-A OS=Dictyostelium discoideum
GN=bcs1la PE=3 SV=1
Length = 421
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 117/225 (52%), Gaps = 33/225 (14%)
Query: 174 LLYTNSRGGSLDSRGHPWESVSFKHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTG 233
++Y N G+ + G+P + + ++ + + K +++ED+K F S+Y+ G
Sbjct: 164 VIYINGGNGNWERFGNP------RSIRSLSSVILADDLKSKLIEDIKSFITNESWYRNRG 217
Query: 234 RAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVH-NNSELRKLLMKTSSKSII 292
++RGYLLYG PG GKSS+I A+A L DI + L+ ++ ++ LL KSI+
Sbjct: 218 IPYRRGYLLYGEPGNGKSSLINAIAGELNLDICIVSLSSKDIDDKQINHLLNNAPPKSIL 277
Query: 293 VIEDIDCSISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLN 352
+IEDID + ++ R N + N + NNS+T SGLLN
Sbjct: 278 LIEDIDAAF----KSHRDNVDSNNNNS--------------------NNNNSLTYSGLLN 313
Query: 353 FTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCS 397
DG+ S G +I TTN IE LD AL+R GR+D+ I +S +
Sbjct: 314 ALDGVASQEG--RILFMTTNKIELLDSALIREGRIDLKIKVSNAT 356
>sp|Q5UR45|YL572_MIMIV Putative AAA family ATPase L572 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L572 PE=3 SV=1
Length = 196
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 86/160 (53%), Gaps = 7/160 (4%)
Query: 253 MIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTSSK-SIIVIEDIDC-SISLSNRNKRS 310
MI A++ + I+ L L + +++EL LL + K +I+V+EDIDC S ++ +R K
Sbjct: 1 MIKAISTHTKRHIHYLILNNIQDDNELINLLNAVNCKETILVLEDIDCASEAVKSRAKEE 60
Query: 311 NGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT 370
+ E + + + + + +TLSG+LN DG+++ G +I + T
Sbjct: 61 ETVVEKVTDDKSTL---ENKILADQLKKVEKVSKLTLSGILNSLDGIFNSEG--RIVIMT 115
Query: 371 TNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLG 410
TNH E LDPAL+R GR+DM I S C + + +N+ G
Sbjct: 116 TNHSEVLDPALIRRGRIDMQIEFSNCDRYQIAKMYENFYG 155
>sp|Q2SF13|FTSH_HAHCH ATP-dependent zinc metalloprotease FtsH OS=Hahella chejuensis
(strain KCTC 2396) GN=ftsH PE=3 SV=1
Length = 619
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/241 (28%), Positives = 103/241 (42%), Gaps = 42/241 (17%)
Query: 178 NSRGGSLDSRGHPWESVSFKHP-STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAW 236
+ RGG+ D + P +TFD +A K E+ E L ++ + + G
Sbjct: 150 SGRGGAFDFDKRLETQFECQKPDTTFDEVAGQTNAKREVQE-LVEYLRDPDRFHRVGALA 208
Query: 237 KRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL---ELTEVH---NNSELRKL--LMKTSS 288
RG LL GPPGTGK+ + A+A G + Y + E EV S +R+L + K +S
Sbjct: 209 PRGVLLMGPPGTGKTLLARALAGEAGVNFYPMSASEFIEVFVGVGASRVRQLFKIAKENS 268
Query: 289 KSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLS 348
SII I+++D R+ G+G GG TL+
Sbjct: 269 PSIIFIDELDSV-------GRTRGAG---------------------YGGGHDEREQTLN 300
Query: 349 GLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKN 407
+L DG G + + V TN + LDPAL+R GR D H+ + + +LK
Sbjct: 301 QILAEMDGF---AGHDAVIVLAATNRPDVLDPALMRPGRFDRHVTLDLPDQEGRVAILKV 357
Query: 408 Y 408
+
Sbjct: 358 H 358
>sp|Q6M2F0|FTSH_CORGL ATP-dependent zinc metalloprotease FtsH OS=Corynebacterium
glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 /
LMG 3730 / NCIMB 10025) GN=ftsH PE=3 SV=1
Length = 853
Score = 73.2 bits (178), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 82/190 (43%), Gaps = 38/190 (20%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL- 268
E+ ++ + ++KDF + Y+ G RG LLYGPPGTGK+ + A+A G Y +
Sbjct: 171 EEAVDELHEIKDFLEDPTRYEALGAKIPRGVLLYGPPGTGKTLLARAVAGEAGVPFYSIS 230
Query: 269 -----ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGN 321
E+ S +R L K +S II +++ID R+ GSG
Sbjct: 231 GSDFVEMFVGVGASRVRDLFKQAKENSPCIIFVDEIDAV-------GRARGSG------- 276
Query: 322 GNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPAL 381
+GG TL+ LL DG G I + TN + LDPAL
Sbjct: 277 --------------MGGGHDEREQTLNQLLVEMDGFGDRQGV--ILMAATNRPDVLDPAL 320
Query: 382 LRSGRMDMHI 391
LR GR D I
Sbjct: 321 LRPGRFDRQI 330
>sp|P0C5C0|FTSH_MYCTU ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis GN=ftsH PE=1 SV=1
Length = 760
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 88/204 (43%), Gaps = 41/204 (20%)
Query: 200 STF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
+TF D +D + +E + ++KDF S YQ G +G LLYGPPGTGK+ + A+A
Sbjct: 160 TTFADVAGVD--EAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVA 217
Query: 259 NYLGYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRS 310
G + + E+ S +R L K +S II +++ID R
Sbjct: 218 GEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAV-------GRQ 270
Query: 311 NGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT 370
G+G +GG TL+ LL DG G I +
Sbjct: 271 RGAG---------------------LGGGHDEREQTLNQLLVEMDGFGDRAGV--ILIAA 307
Query: 371 TNHIEKLDPALLRSGRMDMHIFMS 394
TN + LDPALLR GR D I +S
Sbjct: 308 TNRPDILDPALLRPGRFDRQIPVS 331
>sp|A5U8T5|FTSH_MYCTA ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium
tuberculosis (strain ATCC 25177 / H37Ra) GN=ftsH PE=3
SV=1
Length = 760
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 88/204 (43%), Gaps = 41/204 (20%)
Query: 200 STF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
+TF D +D + +E + ++KDF S YQ G +G LLYGPPGTGK+ + A+A
Sbjct: 160 TTFADVAGVD--EAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVA 217
Query: 259 NYLGYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRS 310
G + + E+ S +R L K +S II +++ID R
Sbjct: 218 GEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAV-------GRQ 270
Query: 311 NGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT 370
G+G +GG TL+ LL DG G I +
Sbjct: 271 RGAG---------------------LGGGHDEREQTLNQLLVEMDGFGDRAGV--ILIAA 307
Query: 371 TNHIEKLDPALLRSGRMDMHIFMS 394
TN + LDPALLR GR D I +S
Sbjct: 308 TNRPDILDPALLRPGRFDRQIPVS 331
>sp|P0A4V9|FTSH_MYCBO ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=ftsH PE=3 SV=1
Length = 760
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 88/204 (43%), Gaps = 41/204 (20%)
Query: 200 STF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
+TF D +D + +E + ++KDF S YQ G +G LLYGPPGTGK+ + A+A
Sbjct: 160 TTFADVAGVD--EAVEELYEIKDFLQNPSRYQALGAKIPKGVLLYGPPGTGKTLLARAVA 217
Query: 259 NYLGYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRS 310
G + + E+ S +R L K +S II +++ID R
Sbjct: 218 GEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAV-------GRQ 270
Query: 311 NGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT 370
G+G +GG TL+ LL DG G I +
Sbjct: 271 RGAG---------------------LGGGHDEREQTLNQLLVEMDGFGDRAGV--ILIAA 307
Query: 371 TNHIEKLDPALLRSGRMDMHIFMS 394
TN + LDPALLR GR D I +S
Sbjct: 308 TNRPDILDPALLRPGRFDRQIPVS 331
>sp|Q7URM7|FTSH2_RHOBA ATP-dependent zinc metalloprotease FtsH 2 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH2 PE=3 SV=1
Length = 728
Score = 72.4 bits (176), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 89/203 (43%), Gaps = 39/203 (19%)
Query: 199 PSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
P+TF+ +A E+ ++ + ++ DF YQ G +G LL GPPGTGK+ + A+A
Sbjct: 247 PTTFEDVA-GIEEAVDEVREVVDFLKNSEKYQSLGGRIPKGVLLVGPPGTGKTLLAKAIA 305
Query: 259 NYLGYDIYDL------ELTEVHNNSELRKLLMKTSSKS--IIVIEDIDCSISLSNRNKRS 310
G + L E+ + +R + + +++ II I+++D
Sbjct: 306 GEAGVPFFSLSGSDFVEMFVGVGAARVRDMFTQAVNRAPCIIFIDELDA----------- 354
Query: 311 NGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT 370
G + SGSV G TL+ LL DG S G I V
Sbjct: 355 --------LG---------KSRSGSVVGGHDEREQTLNALLVEMDGFDSNSGV--IVVAA 395
Query: 371 TNHIEKLDPALLRSGRMDMHIFM 393
TN E LDPALLR GR D H+ +
Sbjct: 396 TNRPETLDPALLRPGRFDRHVLV 418
>sp|C7N1I1|FTSH_SLAHD ATP-dependent zinc metalloprotease FtsH OS=Slackia
heliotrinireducens (strain ATCC 29202 / DSM 20476 / NCTC
11029 / RHS 1) GN=ftsH PE=3 SV=1
Length = 783
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 84/192 (43%), Gaps = 38/192 (19%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSM---IAAMANYLGYDIY 266
++ +E ++++KDF YQK G RG LL GPPGTGK+ + +A AN + I
Sbjct: 291 DEAVEELQEIKDFLVNPGKYQKLGAKIPRGCLLVGPPGTGKTLLARAVAGEANVPFFSIS 350
Query: 267 DLELTEVH---NNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGN 321
E E+ S +R L K ++ SII I++ID R G+G
Sbjct: 351 GSEFVEMFVGVGASRVRNLFEQAKEAAPSIIFIDEIDAV-------GRQRGTG------- 396
Query: 322 GNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPAL 381
+GG TL+ LL DG + + TN ++ LDPAL
Sbjct: 397 --------------LGGGHDEREQTLNQLLVEMDGFEK--NDAVVLIAATNRVDVLDPAL 440
Query: 382 LRSGRMDMHIFM 393
LR GR D I +
Sbjct: 441 LRPGRFDRQIVV 452
>sp|Q9CD58|FTSH_MYCLE ATP-dependent zinc metalloprotease FtsH OS=Mycobacterium leprae
(strain TN) GN=ftsH PE=3 SV=1
Length = 787
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 87/204 (42%), Gaps = 41/204 (20%)
Query: 200 STF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
+TF D +D + +E + ++KDF YQ G +G LLYGPPGTGK+ + A+A
Sbjct: 160 TTFADVAGVD--EAVEELYEIKDFLQNPCRYQTLGAKIPKGVLLYGPPGTGKTLLARAVA 217
Query: 259 NYLGYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRS 310
G + + E+ S +R L K +S II +++ID R
Sbjct: 218 GEAGVPFFTISGSDFVEMFVGVGASRVRDLFDQAKQNSPCIIFVDEIDAV-------GRQ 270
Query: 311 NGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT 370
G+G +GG TL+ LL DG G I +
Sbjct: 271 RGTG---------------------LGGGHDEREQTLNQLLVEMDGFGDRAGV--ILIAA 307
Query: 371 TNHIEKLDPALLRSGRMDMHIFMS 394
TN + LDPALLR GR D I +S
Sbjct: 308 TNRPDILDPALLRPGRFDRQIPVS 331
>sp|C0ZPK5|FTSH_RHOE4 ATP-dependent zinc metalloprotease FtsH OS=Rhodococcus erythropolis
(strain PR4 / NBRC 100887) GN=ftsH PE=3 SV=1
Length = 854
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 38/190 (20%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL- 268
++ +E + ++KDF + YQ G RG LLYGPPGTGK+ + A+A G + +
Sbjct: 173 DEAVEELYEIKDFLQNPARYQALGAKIPRGVLLYGPPGTGKTLLARAVAGEAGVPFFTIS 232
Query: 269 -----ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGN 321
E+ S +R + K +S II +++ID R G+G
Sbjct: 233 GSDFVEMFVGVGASRVRDMFEQAKQNSPCIIFVDEIDAV-------GRQRGAG------- 278
Query: 322 GNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPAL 381
+GG TL+ LL DG G I + TN + LDPAL
Sbjct: 279 --------------LGGGHDEREQTLNQLLVEMDGFGDRTGI--ILIAATNRPDILDPAL 322
Query: 382 LRSGRMDMHI 391
LR GR D I
Sbjct: 323 LRPGRFDRQI 332
>sp|Q1AV13|FTSH_RUBXD ATP-dependent zinc metalloprotease FtsH OS=Rubrobacter xylanophilus
(strain DSM 9941 / NBRC 16129) GN=ftsH PE=3 SV=1
Length = 651
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 38/207 (18%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL- 268
++ ++ + ++K+F +QK G +G LL GPPGTGK+ + A+A G + +
Sbjct: 195 DEAVQELTEIKEFLENPQKFQKLGARIPKGALLVGPPGTGKTLLARAVAGEAGVPFFSIS 254
Query: 269 -----ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGN 321
E+ S +R L K +S II +++ID R G+G
Sbjct: 255 GSDFVEMFVGVGASRVRDLFEQAKQNSPCIIFVDEIDAV-------GRQRGAG------- 300
Query: 322 GNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPAL 381
+GG TL+ LL DG S G I + TN + LDPAL
Sbjct: 301 --------------LGGGHDEREQTLNQLLVEMDGFDSKSGI--IMLAATNRPDILDPAL 344
Query: 382 LRSGRMDMHIFMSYCSYPALLILLKNY 408
LR GR D I + P + +LK +
Sbjct: 345 LRPGRFDRQIVVDRPDLPGRIKILKVH 371
>sp|D2QZ34|FTSH_PIRSD ATP-dependent zinc metalloprotease FtsH OS=Pirellula staleyi
(strain ATCC 27377 / DSM 6068 / ICPB 4128) GN=ftsH PE=3
SV=1
Length = 700
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 221 DFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL------ELTEVH 274
DF YQK G +G LL GPPGTGK+ + A+A G + L E+
Sbjct: 239 DFLRSPEKYQKLGGRIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSDFVEMFVGV 298
Query: 275 NNSELRKLLMKTSSKS--IIVIEDIDCSISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCG 332
+ +R + + +K+ II I+++D G G
Sbjct: 299 GAARVRDMFQQAEAKAPCIIFIDELDA-------------------LGKSR--------G 331
Query: 333 SGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIF 392
+G +GG D TL+ LL DG S G I + TN E LDPALLR GR D H+
Sbjct: 332 AGIMGGHDEREQ-TLNALLVEMDGFGSNSGV--IVMAATNRPETLDPALLRPGRFDRHVL 388
Query: 393 M 393
+
Sbjct: 389 V 389
>sp|P73437|FTSH4_SYNY3 ATP-dependent zinc metalloprotease FtsH 4 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH4 PE=2 SV=1
Length = 628
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 90/216 (41%), Gaps = 37/216 (17%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD +A E K E+ E + DF Y G +G LL GPPGTGK+ + A A
Sbjct: 172 TFDDVAGVEEAKTELSE-VVDFLKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAKAAAGE 230
Query: 261 LGYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNG 312
G + + EL + +R L K + I+ I+++D +S
Sbjct: 231 AGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAI-------GKSRA 283
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
SG+ +GG D TL+ LL DG +S G+ I + TN
Sbjct: 284 SGA-------------------FMGGNDEREQ-TLNQLLTEMDG-FSAAGATVIVLAATN 322
Query: 373 HIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNY 408
E LDPALLR GR D + + L +L+ Y
Sbjct: 323 RPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIY 358
>sp|D4HA34|FTSH_PROAS ATP-dependent zinc metalloprotease FtsH OS=Propionibacterium acnes
(strain SK137) GN=ftsH PE=3 SV=1
Length = 717
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL- 268
++ I+ ++++++F + +Q+ G +G LLYGPPGTGK+ + A+A G + +
Sbjct: 173 QEAIDELQEIREFLAEPAKFQRVGAKIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFSIS 232
Query: 269 -----ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGN 321
E+ S +R L K ++ +II I++ID R++
Sbjct: 233 GSDFVEMFVGVGASRVRDLFEQAKEAAPAIIFIDEIDA----VGRHR------------- 275
Query: 322 GNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPAL 381
G+G GG D TL+ LL DG G I + TN + LDPAL
Sbjct: 276 ----------GAGMGGGHD-EREQTLNQLLVEMDGFDVHGGV--ILIAATNRPDVLDPAL 322
Query: 382 LRSGRMDMHIFMSYCSYPALLILLKNY 408
LR GR D I + L +LK +
Sbjct: 323 LRPGRFDRQIAVEAPDLDGRLKILKVH 349
>sp|Q6F0E5|FTSH_MESFL ATP-dependent zinc metalloprotease FtsH OS=Mesoplasma florum
(strain ATCC 33453 / NBRC 100688 / NCTC 11704 / L1)
GN=ftsH PE=3 SV=1
Length = 650
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 90/201 (44%), Gaps = 41/201 (20%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
F +A E+K E++E L D+ + Y + G +G L+ GPPGTGK+ + A+A
Sbjct: 176 FANVAGIEEEKSELVE-LVDYLKFPAKYAEAGARAPKGVLMEGPPGTGKTLLAKAVAGEA 234
Query: 262 GYDIYDLELTEVH------NNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGS 313
G + + +E S +R++ K S+ +II I++ID KR+NG
Sbjct: 235 GVSFFSIAGSEFEEMFVGVGASRVREMFNDAKKSAPAIIFIDEIDAV-----GRKRNNGM 289
Query: 314 GSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNH 373
GS G N TL+ LL DG + G I + TN
Sbjct: 290 GS-------------------------GGNEQTLNQLLVEMDGFGTNSGI--IVMAATNR 322
Query: 374 IEKLDPALLRSGRMDMHIFMS 394
+ LDPALLR GR D I +S
Sbjct: 323 ADVLDPALLRPGRFDRVIQVS 343
>sp|D1CDT8|FTSH_THET1 ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum
(strain ATCC BAA-798 / YNP1) GN=ftsH PE=3 SV=1
Length = 646
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 87/202 (43%), Gaps = 38/202 (18%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD +A E K E+ E + DF YQ+ G +G LL GPPGTGK+ + A+A
Sbjct: 195 TFDDVAGIEEAKQELAE-IVDFLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAVAGE 253
Query: 261 LGYDIYDL------ELTEVHNNSELRKLLM--KTSSKSIIVIEDIDCSISLSNRNKRSNG 312
G + + E+ + +R+L K + II ++++D
Sbjct: 254 AGVPFFSMSGSEFVEMIVGVGAARVRELFQQAKKEAPCIIFVDELDA------------- 300
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
G R R S +VGG D TL+ LL DG S G I + TN
Sbjct: 301 IGRR-------------RGSSINVGGHDEREQ-TLNQLLVEMDGFDSRQGV--IVLAATN 344
Query: 373 HIEKLDPALLRSGRMDMHIFMS 394
+ LDPALLR GR D + +
Sbjct: 345 RPDVLDPALLRPGRFDRRVVVQ 366
>sp|P46469|FTSH_LACLA ATP-dependent zinc metalloprotease FtsH OS=Lactococcus lactis
subsp. lactis (strain IL1403) GN=ftsH PE=3 SV=1
Length = 695
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 117/289 (40%), Gaps = 66/289 (22%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
F +A E+K E++E + DF Y G G LL GPPGTGK+ + A+A
Sbjct: 192 FADVAGSEEEKQELVE-VVDFLKNPKKYHDLGARIPAGVLLEGPPGTGKTLLAKAVAGEA 250
Query: 262 GYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGS 313
G Y + E+ S +R L K ++ SII I++ID R G+
Sbjct: 251 GVPFYSISGSDFVEMFVGVGASRVRDLFENAKKTAPSIIFIDEIDAV-------GRQRGA 303
Query: 314 GSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNH 373
G +GG + TL+ LL DG + G+ I + TN
Sbjct: 304 G---------------------LGGGNDEREQTLNQLLVEMDG-FQDDGNSVIVIAATNR 341
Query: 374 IEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYL-------------------GYEES 414
+ LDPALLR GR D + + +LK + GY +
Sbjct: 342 SDVLDPALLRPGRFDRKVLVGAPDVKGREAVLKVHAKNKPLASDVDLHNVATQTPGYVGA 401
Query: 415 DLEDETLKELEDVVG---KAEMTPADISEVLIK-----NKRDKCKAVRE 455
DLE+ L E V K E+ ADI E + + K+D+ +++RE
Sbjct: 402 DLEN-VLNEAALVAARQNKKEINAADIDEGMDRAMAGPAKKDRIQSMRE 449
>sp|A6TWP7|FTSH2_ALKMQ ATP-dependent zinc metalloprotease FtsH 2 OS=Alkaliphilus
metalliredigens (strain QYMF) GN=ftsH2 PE=3 SV=1
Length = 689
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 103/250 (41%), Gaps = 42/250 (16%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD +A E+K E+ E+L DF Y + G +G L+ GPPGTGK+ + A+A
Sbjct: 163 TFDDVAGLDEEKAEV-EELVDFLKNPKKYIELGARIPKGILMIGPPGTGKTYLTKAVAGE 221
Query: 261 LGYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNG 312
G + + E+ S +R L K S+ II I++ID R G
Sbjct: 222 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKSAPCIIFIDEIDAV-------GRKRG 274
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
+G +GG TL+ LL DG G I V TN
Sbjct: 275 AG---------------------LGGGHDEREQTLNQLLVEMDGFGINEGI--IIVAATN 311
Query: 373 HIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYEESDLEDETLKELEDVVGKAE 432
+ LDPALLR GR D + + +L+ + + D ED LK L
Sbjct: 312 RPDILDPALLRPGRFDRQVMVGAPDIKGREQILQVHAKGKPLD-EDVNLKVLARRT--PG 368
Query: 433 MTPADISEVL 442
TPADI ++
Sbjct: 369 FTPADIENLM 378
>sp|C7MC16|FTSH_BRAFD ATP-dependent zinc metalloprotease FtsH OS=Brachybacterium faecium
(strain ATCC 43885 / DSM 4810 / NCIB 9860) GN=ftsH PE=3
SV=1
Length = 704
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 84/190 (44%), Gaps = 38/190 (20%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSM---IAAMANYLGYDIY 266
++ +E ++++K F YQ G +G LLYGPPGTGK+ + +A AN Y I
Sbjct: 183 DEAVEELDEIKQFLVDPGRYQAVGAKIPKGVLLYGPPGTGKTLLAKAVAGEANVPFYSIS 242
Query: 267 DLELTEVH---NNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGN 321
+ E+ S +R L K ++ +II I++ID R++
Sbjct: 243 GSDFVEMFVGVGASRVRDLFNTAKENAPAIIFIDEIDA----VGRHR------------- 285
Query: 322 GNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPAL 381
G+G GG D TL+ +L DG I + TN ++ LDPAL
Sbjct: 286 ----------GAGMGGGHD-EREQTLNQMLVEMDGFEEN--QNVILIAATNRVDILDPAL 332
Query: 382 LRSGRMDMHI 391
LR GR D I
Sbjct: 333 LRPGRFDRQI 342
>sp|A9FDV9|FTSH2_SORC5 ATP-dependent zinc metalloprotease FtsH 2 OS=Sorangium cellulosum
(strain So ce56) GN=ftsH2 PE=3 SV=1
Length = 607
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 38/202 (18%)
Query: 200 STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+TF +A + E K E+ E + DF Y+K G RG LL GPPGTGK+ + A+A
Sbjct: 152 ATFRDVAGNAEAKTELSE-IVDFLKAPERYEKLGGRMPRGVLLVGPPGTGKTLLARAIAG 210
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLLMKTSSKS--IIVIEDIDCSISLSNRNKRSN 311
+ E E+ + +R L + K ++ I+++D
Sbjct: 211 EASVPFFSASGSEFVEMFVGVGAARVRDLFSQAREKGACLVFIDELDAV----------- 259
Query: 312 GSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTT 371
++R GSVGG D TL+ LL DG + + + + T
Sbjct: 260 ---------------GKVRGLGGSVGGHD-EREQTLNQLLTEMDGFDAH--TAMVVIGAT 301
Query: 372 NHIEKLDPALLRSGRMDMHIFM 393
N E LDPALLR GR D + +
Sbjct: 302 NRAEILDPALLRPGRFDRRVHI 323
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 86/201 (42%), Gaps = 39/201 (19%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD +A E K E+ E + DF Y + G +G LLYGPPGTGK+ + A+A
Sbjct: 155 TFDDVAGIDEVKEELAE-IVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGE 213
Query: 261 LGYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNG 312
G + + E+ S +R L K +S I+ I++ID R +
Sbjct: 214 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDA----VGRQR---- 265
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
G+G GG D TL+ LL DG + G I + TN
Sbjct: 266 -------------------GAGYGGGHDEREQ-TLNQLLVEMDGFSANEGI--IIIAATN 303
Query: 373 HIEKLDPALLRSGRMDMHIFM 393
+ LDPALLR GR D I +
Sbjct: 304 RPDVLDPALLRPGRFDRQIVI 324
>sp|Q3A579|FTSH_PELCD ATP-dependent zinc metalloprotease FtsH OS=Pelobacter carbinolicus
(strain DSM 2380 / Gra Bd 1) GN=ftsH PE=3 SV=1
Length = 646
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 39/216 (18%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TF +A E K E+ME ++ N F + +A RG LL GPPGTGK+ M A+A
Sbjct: 174 TFADVAGLDEAKQELMEIIEFLRNPKKFMRLGAKA-PRGVLLVGPPGTGKTLMARAVAGE 232
Query: 261 LGYDIYDLELTEV------HNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNG 312
+ + ++ S +R L K ++ SII I+++D RS G
Sbjct: 233 AEVPFFTISASQFIEMFVGVGASRVRDLFNNAKKNAPSIIFIDELDAV-------GRSRG 285
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
+G +GG + TL+ LL+ DG + E I + TN
Sbjct: 286 TG---------------------LGGGNDEREQTLNQLLSEMDGFEAH--DEVIVMSATN 322
Query: 373 HIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNY 408
+ LDPALLR GR D + + + A +LK +
Sbjct: 323 RPDVLDPALLRPGRFDRQVTVERPDWRAREEILKVH 358
>sp|Q9HGM3|YTA12_SCHPO Mitochondrial respiratory chain complexes assembly protein rca1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yta12 PE=3 SV=1
Length = 773
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 86/198 (43%), Gaps = 41/198 (20%)
Query: 203 DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAM---AN 259
D +D E K EIME +K F FY++ G RG +L GPPGTGK+ + A AN
Sbjct: 297 DVAGVD-EAKEEIMEFVK-FLKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEAN 354
Query: 260 YLGYDIYDLELTEVH---NNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGSG 314
+ E E+ S +R L + ++ II I++ID ++ G G
Sbjct: 355 VPFLSVSGSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAI-------GKARGRG 407
Query: 315 SRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT-TNH 373
G G D S TL+ LL DG S SE I VF TN
Sbjct: 408 -------------------GQFGSNDERES-TLNQLLVEMDGFTS---SEHIVVFAGTNR 444
Query: 374 IEKLDPALLRSGRMDMHI 391
+ LDPALLR GR D I
Sbjct: 445 PDVLDPALLRPGRFDRQI 462
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 197 KHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAA 256
K TF+ +A + K+E+ E + DF + G RG LL GPPGTGK+ + A
Sbjct: 163 KTQITFNDVAGIDQAKLELAE-VVDFLKNSERFTALGAKIPRGVLLVGPPGTGKTLLARA 221
Query: 257 MANYLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNK 308
+A G + + E E+ S +R L K ++ I+ I++ID
Sbjct: 222 VAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKQNAPCIVFIDEIDAV-------G 274
Query: 309 RSNGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFV 368
R G+G +GG + TL+ LL DG G I +
Sbjct: 275 RQRGAG---------------------LGGGNDEREQTLNQLLTEMDGFEGNSGI--IVI 311
Query: 369 FTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNY 408
TN + LD ALLR GR D + + + L +LK +
Sbjct: 312 AATNRPDVLDAALLRPGRFDRQVTVDRPDFQGRLEILKVH 351
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 114/279 (40%), Gaps = 58/279 (20%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD +A E K E+ E + +F + G RG LL GPPGTGK+ + A+A
Sbjct: 161 TFDDVAGVDEAKEELQE-IVEFLKYPEKFAALGARIPRGVLLVGPPGTGKTLLSRAVAGE 219
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNG 312
G + + E E+ S +R L K ++ I+ I++ID R G
Sbjct: 220 AGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFIDEIDAV-------GRQRG 272
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
+G +GG TL+ +L DG S + I + TN
Sbjct: 273 AG---------------------LGGSHDEREQTLNQILVEMDGFDSS--TNVIVIAATN 309
Query: 373 HIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYE--ESDLEDETL--------- 421
+ LDPALLR GR D + + L +LK + + ESD++ E L
Sbjct: 310 RPDVLDPALLRPGRFDRQVVLDRPDLHGRLAILKVHTRGKPLESDVDLEDLARQTPGFSG 369
Query: 422 KELEDVVGKAEMTPADISEVLIKNKRDKCKAVRELLETL 460
+LE++V +A +L + K REL E +
Sbjct: 370 ADLENLVNEA--------AILAARRNKKTIGRRELYEAI 400
>sp|Q67T82|FTSH2_SYMTH ATP-dependent zinc metalloprotease FtsH 2 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH2 PE=3 SV=1
Length = 587
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 86/201 (42%), Gaps = 38/201 (18%)
Query: 199 PSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMA 258
P TF +A E K E +E++ D+ Y+ G +G LLYGPPGTGK+ + A+A
Sbjct: 148 PVTFADVAGMDEVKGE-LEEIVDYLKNPDKYRAIGARIPKGVLLYGPPGTGKTLLARAVA 206
Query: 259 NYLGYDIYDL------ELTEVHNNSELRKLLMKT--SSKSIIVIEDIDCSISLSNRNKRS 310
G + L EL S +R+L + ++ I+ I++ID R
Sbjct: 207 GEAGVPFFALSGSSFVELFVGMGASRVRELFAQARKNAPCIVFIDEIDAV-------GRQ 259
Query: 311 NGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFT 370
GS + VGG D TL+ LL DG + G I +
Sbjct: 260 RGS-------------------AAVVGGHDEREQ-TLNQLLTEMDGFGAYEGV--IVMAA 297
Query: 371 TNHIEKLDPALLRSGRMDMHI 391
TN + LD ALLR GR D I
Sbjct: 298 TNRPDVLDKALLRPGRFDRQI 318
>sp|C7M0M0|FTSH_ACIFD ATP-dependent zinc metalloprotease FtsH OS=Acidimicrobium
ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882
/ ICP) GN=ftsH PE=3 SV=1
Length = 660
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 91/217 (41%), Gaps = 39/217 (17%)
Query: 200 STFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
+TFD +A K E+ E + DF S + + G +G LL GPPGTGK+ + A+A
Sbjct: 170 TTFDDVAGYQGVKGEVKE-VVDFLRDPSRFSQLGARIPKGILLVGPPGTGKTLLARAVAG 228
Query: 260 YLGYDIYD------LELTEVHNNSELRKLLM--KTSSKSIIVIEDIDCSISLSNRNKRSN 311
G +E+ + +R L + S SII I++ID S KR
Sbjct: 229 EAGVPFMSVSGSDFMEMFVGVGAARVRDLFQTARRQSPSIIFIDEID-----SIGRKRGT 283
Query: 312 GSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTT 371
G G GG D TL+ +L+ DG G + + T
Sbjct: 284 GLG----------------------GGHDEREQ-TLNQMLSEMDGFDPAEG--IVVMAAT 318
Query: 372 NHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNY 408
N + LDPALLR GR D I + P L +L+ +
Sbjct: 319 NRPDILDPALLRPGRFDRQIVVPLPDLPERLAILQVH 355
>sp|B3R057|FTSH1_PHYMT ATP-dependent zinc metalloprotease FtsH 1 OS=Phytoplasma mali
(strain AT) GN=ftsH1 PE=3 SV=1
Length = 600
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 194 VSFKHPS--TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKS 251
VS K S TF +A + E+K E M +L DF Y+ G A +G LL GPPGTGK+
Sbjct: 164 VSAKQKSLFTFKDVAGNTEEKEE-MTELIDFLKQPQKYETIGAAIPKGVLLEGPPGTGKT 222
Query: 252 SMIAAMANYLGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDIDCSISL 303
+ A+A Y + E E++ S +R L K ++ ++ I++ID
Sbjct: 223 LLAKALAGEASVPFYAVSGSEFVEMYVGVGASRVRTLFKEAKLNAPCVLFIDEIDVL--- 279
Query: 304 SNRNKRSNGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGS 363
G RG G+ S G ++ + TL+ LL DG G
Sbjct: 280 ---------GGKRG--------------GNSSGGNQEKDQ--TLNQLLTEMDGFTQAKGI 314
Query: 364 EKIFVFTTNHIEKLDPALLRSGRMDMHIFMS 394
I + TN + LD ALLR GR D I ++
Sbjct: 315 --IVIGATNRADMLDAALLRPGRFDRKILVN 343
>sp|Q3B6R3|FTSH_PELLD ATP-dependent zinc metalloprotease FtsH OS=Pelodictyon luteolum
(strain DSM 273) GN=ftsH PE=3 SV=1
Length = 706
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 86/201 (42%), Gaps = 38/201 (18%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TF +A E K E+ME + DF Y + G +G LL GPPGTGK+ + A+A
Sbjct: 197 TFKDVAGLDEAKAEVME-VVDFLKDPKKYTRLGGKLPKGVLLVGPPGTGKTLLAKAVAGE 255
Query: 261 LGYDIYDL------ELTEVHNNSELRKLLMKTSSKS--IIVIEDIDCSISLSNRNKRSNG 312
+ + E+ + +R L + K+ II I++ID RS G
Sbjct: 256 ADVPFFSISGSDFVEMFVGVGAARVRDLFRQAKEKAPCIIFIDEIDAV-------GRSRG 308
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
G+ +GG D + TL+ LL DG + G I + TN
Sbjct: 309 KGA-------------------MMGGNDEREN-TLNQLLVEMDGFATDKGV--ILMAATN 346
Query: 373 HIEKLDPALLRSGRMDMHIFM 393
+ LDPALLR GR D I +
Sbjct: 347 RPDVLDPALLRPGRFDRQIMV 367
>sp|D3FA80|FTSH2_CONWI ATP-dependent zinc metalloprotease FtsH 2 OS=Conexibacter woesei
(strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577)
GN=ftsH2 PE=3 SV=1
Length = 691
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 86/202 (42%), Gaps = 39/202 (19%)
Query: 198 HPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAM 257
H TF +A PE E+ E ++D+ + S Y G A +G LL GPPGTGK+ + A+
Sbjct: 220 HRVTFADIAGVPEAVAELAE-IRDYLDDPSRYLDLGAAAPKGVLLVGPPGTGKTLLAKAV 278
Query: 258 ANYLGYDIYDLELTEVHNN------SELRKLLMKTS--SKSIIVIEDIDCSISLSNRNKR 309
A + L ++ + + +R L K S +II I++ D + R
Sbjct: 279 AGEADAAFFSLSGSDFVESLVGVGAARVRDLFAKARRMSPAIIFIDEFDAA-------GR 331
Query: 310 SNGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF 369
G+G G GN + TL+ LL DG G + +
Sbjct: 332 KRGAG----IGQGNDEREQ-----------------TLNQLLVEMDGFSGDGG--LVVMG 368
Query: 370 TTNHIEKLDPALLRSGRMDMHI 391
TN + LDPALLR GR D I
Sbjct: 369 ATNRPDILDPALLRPGRFDRQI 390
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 95/209 (45%), Gaps = 40/209 (19%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLE 269
E K E++E ++ + +QK G + RG L YGPPGTGK+ + A+AN + ++
Sbjct: 506 EVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVANECAANFISVK 565
Query: 270 LTEV------HNNSELRKLLMKTSSKS--IIVIEDIDCSISLSNRNKRSNGSGSRGNCGN 321
E+ + S +R + K + + ++ ++++D + SRG
Sbjct: 566 GPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSI------------AKSRG---- 609
Query: 322 GNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVF-TTNHIEKLDPA 380
GSVG G + ++ LL DG+ S + +FV TN E+LD A
Sbjct: 610 ------------GSVGDAGGASDRVVNQLLTEMDGMTS---KKNVFVIGATNRPEQLDAA 654
Query: 381 LLRSGRMDMHIFMSYCSYPALLILLKNYL 409
L+R GR+D +++ + +LK L
Sbjct: 655 LVRPGRLDTLVYVPLPDQASREGILKAQL 683
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 88/202 (43%), Gaps = 45/202 (22%)
Query: 228 FYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEV------HNNSELRK 281
++ G RG L+YGPPGTGK+ M A+AN G + + E+ + S LRK
Sbjct: 250 LFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRK 309
Query: 282 LL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCGSGSVGGE 339
+ +S +II I++ID S++ + +++NG E E R
Sbjct: 310 AFEEAEKNSPAIIFIDEID---SIAPKREKTNG-------------EVERRV-------- 345
Query: 340 DGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYP 399
+S LL DG+ + S + + TN +DPAL R GR D + +
Sbjct: 346 -------VSQLLTLMDGMKAR--SNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPT 396
Query: 400 ALLILL----KNYLGYEESDLE 417
L +L KN E+ DLE
Sbjct: 397 GRLEILSIHTKNMKLGEDVDLE 418
>sp|Q7UUZ7|FTSH1_RHOBA ATP-dependent zinc metalloprotease FtsH 1 OS=Rhodopirellula baltica
(strain SH1) GN=ftsH1 PE=3 SV=1
Length = 672
Score = 63.5 bits (153), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 75/184 (40%), Gaps = 38/184 (20%)
Query: 216 MEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHN 275
++++ DF +QK G +G LL GPPGTGK+ + A+A + + +E
Sbjct: 209 LQEIVDFLKTPEKFQKLGGQVPKGVLLNGPPGTGKTLLARAVAGEADVPFFSVNGSEFIQ 268
Query: 276 ------NSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNGSGSRGNCGNGNYYEP 327
S +R L K S SII I++ID R G+G
Sbjct: 269 MFVGVGASRVRDLFKTAKEQSPSIIFIDEIDAV-------GRQRGAG------------- 308
Query: 328 EMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPALLRSGRM 387
+GG TL+ +L DG I + TN + LDPALLR GR
Sbjct: 309 --------LGGGHDEREQTLNQILGEMDGFGGAQAV--IVIAATNRPDVLDPALLRPGRF 358
Query: 388 DMHI 391
D H+
Sbjct: 359 DRHV 362
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 90/223 (40%), Gaps = 39/223 (17%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TFD +A E K + ME + +F + G +G LL GPPGTGK+ + A+A
Sbjct: 225 TFDDVAGVDEAKQDFME-VVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGE 283
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLLMKTSSKS--IIVIEDIDCSISLSNRNKRSNG 312
G + + E E+ S +R L K + I+ +++ID R G
Sbjct: 284 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV-------GRQRG 336
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
+G +GG + TL+ LL DG G I V TN
Sbjct: 337 TG---------------------IGGGNDEREQTLNQLLTEMDGFEGNTGV--IVVAATN 373
Query: 373 HIEKLDPALLRSGRMDMHIFMSYCSYPALLILLKNYLGYEESD 415
+ LD ALLR GR D + + +LK + G ++ D
Sbjct: 374 RADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFD 416
>sp|B8J992|FTSH_ANAD2 ATP-dependent zinc metalloprotease FtsH OS=Anaeromyxobacter
dehalogenans (strain 2CP-1 / ATCC BAA-258) GN=ftsH PE=3
SV=1
Length = 706
Score = 63.2 bits (152), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 87/202 (43%), Gaps = 41/202 (20%)
Query: 201 TF-DTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMAN 259
TF D ID + +E ++++ +F Y++ G +G LL GPPGTGK+ + A A
Sbjct: 204 TFQDAAGID--EAVEELQEIVEFLKTPEKYRRLGGRIPKGVLLVGPPGTGKTLLARATAG 261
Query: 260 YLGYDIYDL---ELTEVH---NNSELRKLLMKTSSKS--IIVIEDIDCSISLSNRNKRSN 311
G + L E E+ + +R L + + K+ I+ I+++D N
Sbjct: 262 EAGVPFFSLSGSEFVEMFVGVGAARVRDLFAQATQKAPCIVFIDELDALGKSRN------ 315
Query: 312 GSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTT 371
+G +GG D TL+ LL DG + G I + T
Sbjct: 316 ---------------------AGIMGGHD-EREQTLNQLLAEMDGFDARAG--LIIMGAT 351
Query: 372 NHIEKLDPALLRSGRMDMHIFM 393
N E LDPALLR GR D + +
Sbjct: 352 NRPEILDPALLRPGRFDRQVLV 373
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 85/206 (41%), Gaps = 39/206 (18%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TF +A + K+E+ E + DF + + G +G LL GPPGTGK+ + A+A
Sbjct: 159 TFGDVAGIEQAKLELTE-VVDFLKNADRFTELGAKIPKGVLLVGPPGTGKTLLAKAVAGE 217
Query: 261 LGYDIYDL---ELTEVH---NNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNG 312
G + + E E+ S +R L K ++ I+ I++ID R G
Sbjct: 218 AGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKANAPCIVFIDEIDAV-------GRQRG 270
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
+G +GG + TL+ LL DG G I V TN
Sbjct: 271 AG---------------------LGGGNDEREQTLNQLLTEMDGFEGNTGI--IIVAATN 307
Query: 373 HIEKLDPALLRSGRMDMHIFMSYCSY 398
+ LD AL+R GR D + + Y
Sbjct: 308 RPDVLDSALMRPGRFDRQVVVDRPDY 333
>sp|B0K657|FTSH2_THEPX ATP-dependent zinc metalloprotease FtsH 2 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH2 PE=3 SV=1
Length = 510
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 94/229 (41%), Gaps = 54/229 (23%)
Query: 189 HPWESVSFKHPSTFDTLAIDPEKKIEIMEDLK---DFANGMSFYQKTGRAWKRGYLLYGP 245
H +++FK + D E++++LK DF Y K G +G L YGP
Sbjct: 76 HRKTNITFKDVAGLD----------EVIDELKVIIDFMTNTEKYNKMGAKIPKGILFYGP 125
Query: 246 PGTGKSSMIAAMA---NYLGYDIYDLELTEVH---NNSELRKLLMKT--SSKSIIVIEDI 297
PGTGK+ + A+A N E E + S +R L K S+ SII I++I
Sbjct: 126 PGTGKTLLATALAGETNSTFISASGSEFVEKYVGVGASRIRALFAKAKKSAPSIIFIDEI 185
Query: 298 DCSISLSNRNKRSNGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGL 357
D G++ N N + + TL+ LL DG
Sbjct: 186 DA-------------VGTKRNTDNNSEKDQ------------------TLNQLLVEMDGF 214
Query: 358 WSCCGSEKIFVFTTNHIEKLDPALLRSGRMDMHIFMSYCSYPALLILLK 406
S G I + TN I+ LD ALLR GR D I + + A L +LK
Sbjct: 215 NSNEGI--IVIGATNRIDMLDEALLRPGRFDRTIHIGAPNMKARLEILK 261
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 62.4 bits (150), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 89/205 (43%), Gaps = 39/205 (19%)
Query: 197 KHPSTFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAA 256
K+ TF+ +A E K E+ E + DF + +Q+ G +G LL GPPGTGK+ + A
Sbjct: 145 KNRITFEDVAGVDEAKEELQE-VVDFLKDPAKFQRLGGKIPKGALLVGPPGTGKTLIARA 203
Query: 257 MANYLGYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNK 308
+A G + + E+ S +R + K ++ II I++ID
Sbjct: 204 VAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFIDEIDAV-------G 256
Query: 309 RSNGSGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFV 368
R G+G +GG + TL+ LL DG + G I +
Sbjct: 257 RHRGAG---------------------LGGGNDEREQTLNQLLVEMDGFEANEGI--ILI 293
Query: 369 FTTNHIEKLDPALLRSGRMDMHIFM 393
TN + LDPALLR GR D + +
Sbjct: 294 AATNRPDVLDPALLRPGRFDRQVVV 318
>sp|O19922|FTSH_CYACA ATP-dependent zinc metalloprotease FtsH OS=Cyanidium caldarium
GN=ftsH PE=3 SV=1
Length = 614
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 84/207 (40%), Gaps = 38/207 (18%)
Query: 210 EKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDL- 268
E+ E ++++ F + G +G LL GPPGTGK+ + A+A + +
Sbjct: 177 EEAKEELQEIVAFLKDSRKFTNVGATIPKGVLLVGPPGTGKTLLAKAIAGEASAPFFSIS 236
Query: 269 --ELTEVH---NNSELRKLLMKTSSKS--IIVIEDIDCSISLSNRNKRSNGSGSRGNCGN 321
E E+ S +R L K K+ I+ I++ID R G G
Sbjct: 237 GSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAV-------GRQRGVG------- 282
Query: 322 GNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNHIEKLDPAL 381
+GG + TL+ LL DG G I V TN I+ LD AL
Sbjct: 283 --------------IGGGNDEREQTLNQLLTEMDGFSGDTGV--IVVAATNRIDVLDSAL 326
Query: 382 LRSGRMDMHIFMSYCSYPALLILLKNY 408
LR GR D I +S + L +LK +
Sbjct: 327 LRPGRFDRQIMVSLPNINGRLAILKVH 353
>sp|Q4L3G8|FTSH_STAHJ ATP-dependent zinc metalloprotease FtsH OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ftsH PE=3 SV=1
Length = 727
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 83/199 (41%), Gaps = 44/199 (22%)
Query: 203 DTLAIDPEKK--IEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
D D EK+ IEI++ LKD +++ G +G LL GPPGTGK+ + A+A
Sbjct: 166 DVAGADEEKQELIEIVDFLKDNKK----FKQMGSRIPKGVLLVGPPGTGKTLLARAVAGE 221
Query: 261 LGYDIYDL------ELTEVHNNSELRKLL--MKTSSKSIIVIEDIDCSISLSNRNKRSNG 312
G + + E+ S +R L K ++ II I++ID R G
Sbjct: 222 AGAPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCIIFIDEIDAV-------GRQRG 274
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
+G VGG TL+ LL DG G I + TN
Sbjct: 275 AG---------------------VGGGHDEREQTLNQLLVEMDGFGENEGI--IMIAATN 311
Query: 373 HIEKLDPALLRSGRMDMHI 391
+ LDPALLR GR D I
Sbjct: 312 RPDILDPALLRPGRFDRQI 330
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 82/199 (41%), Gaps = 39/199 (19%)
Query: 201 TFDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANY 260
TF +A + K+E+ E + DF Y G +G LL GPPGTGK+ + A+A
Sbjct: 248 TFGDVAGADQAKLELQE-VVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 306
Query: 261 LGYDIYD------LELTEVHNNSELRKLLMKTSSKS--IIVIEDIDCSISLSNRNKRSNG 312
G + +EL S +R L K SK+ I+ I++ID R G
Sbjct: 307 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAV-------GRQRG 359
Query: 313 SGSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTN 372
+G +GG + T++ LL DG G I + TN
Sbjct: 360 AG---------------------MGGGNDEREQTINQLLTEMDGFSGNSGV--IVLAATN 396
Query: 373 HIEKLDPALLRSGRMDMHI 391
+ LD ALLR GR D +
Sbjct: 397 RPDVLDSALLRPGRFDRQV 415
>sp|D3FFN2|FTSH_MYCGH ATP-dependent zinc metalloprotease FtsH OS=Mycoplasma gallisepticum
(strain R(high / passage 156)) GN=ftsH PE=3 SV=1
Length = 765
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 87/198 (43%), Gaps = 39/198 (19%)
Query: 202 FDTLAIDPEKKIEIMEDLKDFANGMSFYQKTGRAWKRGYLLYGPPGTGKSSMIAAMANYL 261
F +A E+K E++E L D+ Y + G RG +LYGPPGTGK+ + A+A
Sbjct: 273 FTDVAGIEEEKSELIE-LVDYLKRPGKYVQMGARTPRGVVLYGPPGTGKTLLAKAVAGEA 331
Query: 262 GYDIYDLELTEVHN------NSELRKLLMKT--SSKSIIVIEDIDCSISLSNRNKRSNGS 313
G + + + + +R L K ++ II I++ID
Sbjct: 332 GVPFFQVTGSAFEDMLVGVGAKRVRNLFAKAKKAAPCIIFIDEIDSV------------- 378
Query: 314 GSRGNCGNGNYYEPEMRCGSGSVGGEDGNNSITLSGLLNFTDGLWSCCGSEKIFVFTTNH 373
GS+ G Y E+ GS + TL+ LL DG + G I + TN
Sbjct: 379 GSK----RGKY---EISAGSAT--------DQTLNQLLAEMDGFSTRTGI--IVMAATNR 421
Query: 374 IEKLDPALLRSGRMDMHI 391
++ LD ALLR GR D HI
Sbjct: 422 LDVLDDALLRPGRFDRHI 439
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 201,154,640
Number of Sequences: 539616
Number of extensions: 8993379
Number of successful extensions: 45241
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1093
Number of HSP's successfully gapped in prelim test: 306
Number of HSP's that attempted gapping in prelim test: 42825
Number of HSP's gapped (non-prelim): 2340
length of query: 517
length of database: 191,569,459
effective HSP length: 122
effective length of query: 395
effective length of database: 125,736,307
effective search space: 49665841265
effective search space used: 49665841265
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)