BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010135
(517 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8RJP2|RHIE_DICD3 Rhamnogalacturonate lyase OS=Dickeya dadantii (strain 3937) GN=rhiE
PE=1 SV=1
Length = 578
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 133/523 (25%), Positives = 199/523 (38%), Gaps = 82/523 (15%)
Query: 1 MLRGSSGFYSYAIYEHLKEWPAFTLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLST 60
M R SG YSY + + P T+ + R ++ + + S
Sbjct: 129 MTRDVSGLYSYVVAANTGSAPV-TVSELRNVYRFDATRLDTLFN--------------SI 173
Query: 61 GRGQPLAYPEAVQLVNPTDPEHQ---GEVDDKYQYSCENKDLKVHGWICRTTPVGFWLII 117
RG PL Y E QL D + G V KY ++ ++ + W G W++
Sbjct: 174 RRGTPLLYDELEQLPKVQDETWRLPDGSVYSKYDFAGYQRESRY--WGVMGNGYGAWMVP 231
Query: 118 PSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKVFGPVFIYLNS 177
S E+ SG LKQ L H L H+ M G ++K++GP +Y+N
Sbjct: 232 ASGEYYSGDALKQELLVHQDAIILNYLTGSHFGTPDMVAQPG----FEKLYGPWLLYINQ 287
Query: 178 AADGDDPLWLWEDAKIKMMSEVQSWPYNFPASEDFQKSEERGCVSGRLLVQDSNDVISAN 237
D + L D + E SWPY + +D + +R VSGRL + + + N
Sbjct: 288 GNDRE----LVADVSRRAEHERASWPYRW--LDDARYPRQRATVSGRLRTEAPHATVVLN 341
Query: 238 GAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSD 297
+ ++ + Y F + DG FS+ N+ G Y L A+ G
Sbjct: 342 SS---------AENFDIQTTGYLFSARTNRDGRFSLSNVPPGEYRLSAYADGGTQIGLLA 392
Query: 298 ALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDR 357
G ++G + P P W IG DR A EF F + P +
Sbjct: 393 QQTVRVEGKKTRLGQIDARQP--APLAWAIGQADRRADEFR------------FGDKPRQ 438
Query: 358 FRQYGLWSRYTELYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHV 417
+R W TE+ DL + IG S KDW++AQ Q +W I F
Sbjct: 439 YR----WQ--TEV--PADLTFEIGKSRERKDWYYAQT---------QPGSWHILFNTRTP 481
Query: 418 DRNSSYKLRVAIASATLAELQVRVNDPN----ANRPLFTTGLIGRDNAIARHGIH-GLYL 472
++ Y L +AIA+A+ + + P N L TT D +I R + G Y
Sbjct: 482 EQ--PYTLNIAIAAASNNGMTTPASSPQLAVKLNGQLLTTLKYDNDKSIYRGAMQSGRYH 539
Query: 473 LYHVNIPGTRFIEGENTIFLKQPRCTSPFQGIMYDYIRLEGPP 515
H+ +P +G N I L+ +MYD I L P
Sbjct: 540 EAHIPLPAGALQQGGNRITLELLGGM-----VMYDAITLTETP 577
>sp|Q5AZ85|RGLB_EMENI Rhamnogalacturonate lyase B OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rglB
PE=2 SV=2
Length = 660
Score = 93.2 bits (230), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 139/571 (24%), Positives = 226/571 (39%), Gaps = 102/571 (17%)
Query: 4 GSSGFYSYAIYEHLKEWPAF--TLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLSTG 61
G +GF+ ++ + E F L + R F+ + + ++ +D + PLP D +
Sbjct: 128 GETGFHMFSRLAYYNETTPFLRNLQELRTLFRPNTDLWTHLTSSD--LQTAPLPSDEAIA 185
Query: 62 RGQPLAYPEAVQLVN--PTDPEHQ--GEVDDKYQYSCENKDLKVHGW-----ICRTTPVG 112
+ + +A +N P D +Q E KY +S +D VHG T G
Sbjct: 186 --EQIVVQDATWRLNNTPDDAYYQQFSEYFTKYTFSNHWRDNDVHGLYADGSTSDGTTYG 243
Query: 113 FWLIIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEP-----WKKV 167
WL++ + + GGPL +LT + G + H G+ P + +
Sbjct: 244 AWLVMNTKDTYYGGPLHSDLT-----------VDGIIYNYIVSNHHGEGTPNITNGFDRT 292
Query: 168 FGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPASE-----DFQKSEERGCVS 222
FGP F N G L D + S SW +F S + S +RG V
Sbjct: 293 FGPQFYLFNGG--GSSSLEELRDEARSLASP--SWNADFYDSIAKHVIGYVPSSQRGSVK 348
Query: 223 GRLLVQDSND----VISANGAYV--GLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNI 276
G + + + V++ +G Y A P +Q+W D++G FSI +
Sbjct: 349 GTIKLPKNAKSPIAVLTVDGHYFQDNSAVP----------SSHQYWADIDKNGRFSIDRV 398
Query: 277 RTGNYNLYAWVPGFVGDYRSDALVTITSGS-NIKMGDLVYEPPRDGPTLWEIGIPDRSAR 335
G Y L + G GD+ D +V S +IK ++P G +W +G PD+S+
Sbjct: 399 VAGKYRLTVYADGIFGDFTRDGIVVKARKSTSIKE---TWKPESAGTEIWRLGTPDKSSG 455
Query: 336 EF-NVPDPDPKYVNRLFVNHPDRFRQYGLWSRY--TELYPNEDLVYTIGVSDYSKDW--- 389
EF + DP + HP + Y W Y +P + Y IG SD + D+
Sbjct: 456 EFRHGAARDPTH-----PRHPPEYLIY--WGAYDWQSDFPG-GIDYMIGESDPATDFNTV 507
Query: 390 FFAQVVREMDNKTYQGTT---WQIKFKLD----HVDRNSSYKLRVAIASATLAELQV-RV 441
+A DN + T W+I+F L H + ++ +++A A A V
Sbjct: 508 HWAVFGPTPDNPVAESNTTHDWRIRFDLSAKQLHARKTATLTIQLAGAKAASGNTDVYNA 567
Query: 442 NDPNANRPLFT---------TGLIGRDNA---IARHGIHGLYLLYHVNIPGTRFIEGENT 489
++P AN PL + T +IG D + I R + + P + EG N
Sbjct: 568 SEPYANLPLRSYINEQEEPLTMVIGYDQSSSCIVRSAVSCYQVREKWEFPASWLKEGSNL 627
Query: 490 IFLKQPRCTSPFQG--------IMYDYIRLE 512
+ L P + ++ + YD +RLE
Sbjct: 628 LRLSLPTNGTNYESAVLPTSVYVQYDALRLE 658
>sp|B8N5T6|RGLB_ASPFN Probable rhamnogalacturonate lyase B OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=rglB PE=3 SV=1
Length = 663
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 128/562 (22%), Positives = 220/562 (39%), Gaps = 82/562 (14%)
Query: 4 GSSGFYSYAIYEHLKEWPAF--TLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLSTG 61
G +G ++++ + E F L + R F+ E + ++ ++ + +P E ++
Sbjct: 129 GETGLHTFSRLAYYNETTPFLRNLQEFRTLFRPNTELWTHLTSSEAQTAPLPSKEAIA-- 186
Query: 62 RGQPLAYPEAVQLVN--PTDPEHQ--GEVDDKYQYSCENKDLKVHGWIC-----RTTPVG 112
+ +A N P D + E KY +S +D VHG T G
Sbjct: 187 --NEVVVQDATWRFNNTPNDAYYTQFSEYFTKYTFSNLWRDNSVHGLYADGTNSNGTTYG 244
Query: 113 FWLIIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKVFGPVF 172
WL++ + + GGPL +LT V +S H+ G D + FGP +
Sbjct: 245 AWLVMNTKDTYYGGPLHSDLT--VDGIVYNYLVSNHHGEGTPNITNGFD----RTFGPQY 298
Query: 173 IYLNSAADGDDPLWLWEDAKIKMMSEVQ-SWPYNFPASE-----DFQKSEERGCVSGRLL 226
N L ED + + + W +F S + S +RG V G++
Sbjct: 299 YLFNGGKGSKSSL---EDLRSEAETLADPGWNADFYDSIAKHVIGYAPSSKRGSVQGQVK 355
Query: 227 VQDSND----VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYN 282
+ + +++ +G Y E +Q+W +DG F + +++ G Y
Sbjct: 356 LPKGSTRPIAILTVDGQYFQ--------DNSVEASSHQYWAEMGQDGTFQLDHVKEGKYR 407
Query: 283 LYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFNVPD- 341
L + G GD+ D V + +G K+ + +E G +W +G PD+S+ EF D
Sbjct: 408 LTVFADGIFGDFVHDG-VEVQAGKVTKVQE-TWEQESAGVEVWRLGTPDKSSGEFLHGDA 465
Query: 342 PDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVYTIGVSDYSKD-----WFFAQVVR 396
PDP + ++ P F +G + + + +PN + YTIG SD + D W
Sbjct: 466 PDPTHP----LHPPQHFIYWGAYD-WQQDFPN-GVNYTIGSSDPAVDFNTVHWSVYGPTP 519
Query: 397 EMDNKTYQGT-TWQIKFKLD--HVDRNSSYKLRVAIASATLAELQVRV---NDPNANRPL 450
+ Y T W I F LD + + + L + +A A A V +P AN L
Sbjct: 520 ANPDVEYDTTHDWTINFSLDKKQLQQRKTATLTIQLAGAKTAAGNTDVYNATEPYANLAL 579
Query: 451 FT---------TGLIG---RDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCT 498
+ T L+G + I R + + + P G N + L PR
Sbjct: 580 ESYINEQKEPLTLLVGFNQSSSCIVRSAVSCYQVRSRMEFPADWLNVGNNVLTLHLPRNA 639
Query: 499 SPFQG--------IMYDYIRLE 512
+ ++ + YD +RLE
Sbjct: 640 TDYETAVLPGTVYVQYDALRLE 661
>sp|Q0C7K7|RGLB_ASPTN Probable rhamnogalacturonate lyase B OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=rglB PE=3 SV=1
Length = 660
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 128/570 (22%), Positives = 210/570 (36%), Gaps = 100/570 (17%)
Query: 4 GSSGFYSYAIYEHLKEWPAFTLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLSTGRG 63
G +G + ++ + E F F R + + + + PLP D + G+
Sbjct: 128 GETGLHMFSRLAYYNETTPFLRNLQEFRTLFRPNTDLWTHLTSSELQTAPLPSDEAVGK- 186
Query: 64 QPLAYPEAVQLVN-PTDPEHQ--GEVDDKYQYSCENKDLKVHGW-----ICRTTPVGFWL 115
Q + + N P D + E KY +S +D VHG T G WL
Sbjct: 187 QVVVQDATWRFNNTPNDAYYTQFSEYFTKYTFSNAWRDNNVHGLYADGSTSNGTTFGAWL 246
Query: 116 IIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEP-----WKKVFGP 170
++ + + GGPL +LT + G + H G+ P + + FGP
Sbjct: 247 VMNTKDTYYGGPLHSDLT-----------VDGIVYNYIVSNHHGEGTPNITNGFDRTFGP 295
Query: 171 VFIYLNSAADGDDPLWLWEDAKIKMMSEVQS-----WPYNFPAS-----EDFQKSEERGC 220
F N + ++ SE +S W F S + S +RG
Sbjct: 296 QFYLFNGGG---------SSSLNELRSEAESLADPSWNVEFYDSIAKHVVGYVPSSKRGS 346
Query: 221 VSGRLLVQDSND----VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNI 276
V G++ + +++ +G Y + + YQ+W D +G F + ++
Sbjct: 347 VQGQIKLPRGATRPIAILTVDGQYFQ--------DNSVDPRSYQYWVEMDANGKFQLDHV 398
Query: 277 RTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSARE 336
G Y L + G GDY D V + ++ D ++P G +W +G PD+S+ E
Sbjct: 399 VEGKYRLTVYADGIFGDYVRDG-VQVRGRKTTRIND-SWQPESAGVEVWRLGTPDKSSGE 456
Query: 337 F-NVPDPDPKYVNRLFVNHPDRFRQYGLWSRY--TELYPNEDLVYTIGVSDYSKDW---- 389
F + DP + HP + Y W Y + +PN + YTIG SD + D+
Sbjct: 457 FLHGVARDPTH-----PLHPPEYLIY--WGAYDWQQDFPN-GVNYTIGSSDPATDFNTVH 508
Query: 390 --FFAQVVREMDNKTYQGTTWQIKFKL--DHVDRNSSYKLRVAIASATLAELQVRV---N 442
F D + W I F L + + + L + +A A A V +
Sbjct: 509 WSVFGPTPDNPDVEYDTTHDWAINFSLTKKQLQKRKTATLTIQLAGAKTASGNTDVYKPD 568
Query: 443 DPNANRPLFT---------TGLIG---RDNAIARHGIHGLYLLYHVNIPGTRFIEGENTI 490
+P N L + T LIG + I R + + + P G NT+
Sbjct: 569 EPYTNLALESYINQQEEPLTMLIGFNQSSSCIVRSAVSCYQVRSRMTFPADWLQVGSNTL 628
Query: 491 FLKQPRCTSPFQG--------IMYDYIRLE 512
L PR + + + YD +RLE
Sbjct: 629 TLHLPRNATDVEDAILPGTVYVQYDALRLE 658
>sp|Q4WR79|RGLB_ASPFU Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=rglB PE=3 SV=1
Length = 658
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 128/565 (22%), Positives = 201/565 (35%), Gaps = 93/565 (16%)
Query: 4 GSSGFYSYAIYEHLKEWPAFTLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLSTGRG 63
G +G + ++ + E F F R + + + + PLP + +
Sbjct: 129 GETGLHMFSRLAYYNETTPFLRNLQEFRTLFRPNTQLWTHLTSSELQTAPLPSKNAVSK- 187
Query: 64 QPLAYPEAVQLVNPTDPEHQGEVDD---KYQYSCENKDLKVHGWICRTT-----PVGFWL 115
Q + + N D + + + KY +S + +D VHG T G WL
Sbjct: 188 QVVVQDATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWL 247
Query: 116 IIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKVFGPVFIYL 175
++ + GPL +LT V +S H+ G D + FGP F
Sbjct: 248 VM-----NTKGPLHSDLT--VDGIVYNYIVSNHHGEGTPNITNGFD----RTFGPQFYLF 296
Query: 176 NSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPAS-----EDFQKSEERGCVSGRLLVQDS 230
N L K+ SW F S + S +RG V GR+ +
Sbjct: 297 NGGKGSTSSLQDLRSEAAKLADP--SWNAEFYDSIAKHVVGYVPSSKRGSVDGRIKLPKG 354
Query: 231 ND----VISANGAYV---GLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNL 283
+++ +G Y + P YQ+WT D G F I + G Y L
Sbjct: 355 ASNPIAILTVDGQYFQDNSVVP-----------SSYQYWTDIDTSGRFRIDRVVEGKYRL 403
Query: 284 YAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFN---VP 340
+ G GD+ D VT+ +G + + ++ G +W +G PD+S+ EF
Sbjct: 404 TVYADGIFGDFVRDG-VTVRAGKTTTVKE-KWDAESAGKEIWRLGTPDKSSGEFRHGVAR 461
Query: 341 DPDPKYVNRLFVNHPDRFRQYGLWSRY--TELYPNEDLVYTIGVSDYSKD-----WFFAQ 393
DP HP + Y W Y +P + + YTIG SD + D W
Sbjct: 462 DPTHPL-------HPPEYLIY--WGAYDWQSDFP-KGIDYTIGSSDPATDFNTVHWSVFG 511
Query: 394 VVREMDNKTYQGT-TWQIKFKLDHVDRNSSYK--LRVAIASATLAEL---QVRVNDPNAN 447
+ N Y T W+I F L +S K L + +A A A + + ++P N
Sbjct: 512 PTPDNPNVEYNTTHDWKINFSLTKKQLRNSKKATLTIQLAGAKTASGNTDEYKASEPYIN 571
Query: 448 -----------RPL-FTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQP 495
PL F G + I R + + + P GENT+ L P
Sbjct: 572 LIHESYINDQKEPLSFVIGFNQSSSCIVRSAVSCYQVRSRMEFPADWLKVGENTLTLHLP 631
Query: 496 RCTSPFQG--------IMYDYIRLE 512
+ + + YD +RLE
Sbjct: 632 YNATDTETAILPATVYVQYDALRLE 656
>sp|B0XPA2|RGLB_ASPFC Probable rhamnogalacturonate lyase B OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=rglB PE=3
SV=1
Length = 658
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 128/565 (22%), Positives = 201/565 (35%), Gaps = 93/565 (16%)
Query: 4 GSSGFYSYAIYEHLKEWPAFTLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLSTGRG 63
G +G + ++ + E F F R + + + + PLP + +
Sbjct: 129 GETGLHMFSRLAYYNETTPFLRNLQEFRTLFRPNTQLWTHLTSSELQTAPLPSKNAVSK- 187
Query: 64 QPLAYPEAVQLVNPTDPEHQGEVDD---KYQYSCENKDLKVHGWICRTT-----PVGFWL 115
Q + + N D + + + KY +S + +D VHG T G WL
Sbjct: 188 QVVVQDATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWL 247
Query: 116 IIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKVFGPVFIYL 175
++ + GPL +LT V +S H+ G D + FGP F
Sbjct: 248 VM-----NTKGPLHSDLT--VDGIVYNYIVSNHHGEGTPNITNGFD----RTFGPQFYLF 296
Query: 176 NSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPAS-----EDFQKSEERGCVSGRLLVQDS 230
N L K+ SW F S + S +RG V GR+ +
Sbjct: 297 NGGKGSTSSLQDLRSEAAKLADP--SWNAEFYDSIAKHVVGYVPSSKRGSVDGRIKLPKG 354
Query: 231 ND----VISANGAYV---GLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNL 283
+++ +G Y + P YQ+WT D G F I + G Y L
Sbjct: 355 ASNPIAILTVDGQYFQDNSVVP-----------SSYQYWTDIDTSGRFRIDRVVEGKYRL 403
Query: 284 YAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFN---VP 340
+ G GD+ D VT+ +G + + ++ G +W +G PD+S+ EF
Sbjct: 404 TVYADGIFGDFVRDG-VTVRAGKTTTVKE-KWDAESAGKEIWRLGTPDKSSGEFRHGVAR 461
Query: 341 DPDPKYVNRLFVNHPDRFRQYGLWSRY--TELYPNEDLVYTIGVSDYSKD-----WFFAQ 393
DP HP + Y W Y +P + + YTIG SD + D W
Sbjct: 462 DPTHPL-------HPPEYLIY--WGAYDWQSDFP-KGIDYTIGSSDPATDFNTVHWSVFG 511
Query: 394 VVREMDNKTYQGT-TWQIKFKLDHVDRNSSYK--LRVAIASATLAEL---QVRVNDPNAN 447
+ N Y T W+I F L +S K L + +A A A + + ++P N
Sbjct: 512 PTPDNPNVEYNTTHDWKINFSLTKKQLRNSKKATLTIQLAGAKTASGNTDEYKASEPYIN 571
Query: 448 -----------RPL-FTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQP 495
PL F G + I R + + + P GENT+ L P
Sbjct: 572 LIHESYINDQKEPLSFVIGFNQSSSCIVRSAVSCYQVRSRMEFPADWLKVGENTLTLHLP 631
Query: 496 RCTSPFQG--------IMYDYIRLE 512
+ + + YD +RLE
Sbjct: 632 YNATDTETAILPATVYVQYDALRLE 656
>sp|A5ABH4|RGLB_ASPNC Probable rhamnogalacturonate lyase B OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=rglB PE=3 SV=1
Length = 706
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 122/541 (22%), Positives = 197/541 (36%), Gaps = 82/541 (15%)
Query: 4 GSSGFYSYAIYEHLKEWPAFTLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLSTGRG 63
G +G ++++ + E + F R + ++ + + PLP +
Sbjct: 129 GETGLHTFSRLAYYNETTPYLRNLQEFRTLFRPNTELWTHLSSSEVQTAPLPSKKAVE-- 186
Query: 64 QPLAYPEAVQLVN--PTDPEHQGEVD--DKYQYSCENKDLKVHGW-----ICRTTPVGFW 114
+ + +A N PTD + D KY +S +D VHG + G W
Sbjct: 187 EEVVVQDATWTFNNTPTDEYYVQFADYFTKYTFSNAWRDNSVHGMYADGSTSNGSTFGAW 246
Query: 115 LIIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKVFGPVFIY 174
L++ + + GGPL +LT V +S H+ G D + FGP + +
Sbjct: 247 LVMNTKDTYYGGPLHSDLT--VDGIVYNYLVSNHHGEGTPNITYGFD----RTFGPQYYH 300
Query: 175 LNSAADGDDPLWLWEDAKIKMMSEV---QSWPYNFPAS-----EDFQKSEERGCVSGRLL 226
N L ++K +E SW +F S + S +RG V G++
Sbjct: 301 FNGGKGSTASL-----QELKSDAETLADPSWNVDFYDSIAKHVVGYTPSSQRGSVQGKIK 355
Query: 227 VQDSND----VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYN 282
+ V++ +G Y YQ+W D+ G FS+ +++ G Y
Sbjct: 356 LPKGATRPIAVLTVDGQYFQ--------DNSVNSSSYQYWAEIDDSGHFSVDHVKEGPYR 407
Query: 283 LYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFN---V 339
L + G GD+ D V + +G + + +E G +W +G PD+S+ EF
Sbjct: 408 LTVYADGIFGDFVRDG-VQVKAGKKTTIQE-TWEAESAGTEIWRLGTPDKSSGEFRHGVA 465
Query: 340 PDPDPKYVNRLFVNHPDRFRQYGLWSRY--TELYPNEDLVYTIGVSDYSKD-----WFFA 392
DP HP + Y W Y +P + + YTIG SD + D W
Sbjct: 466 RDPTHPL-------HPPEYLIY--WGAYDWQSDFP-DGINYTIGTSDPATDLNTVHWSVF 515
Query: 393 QVVREMDNKTYQGT-TWQIKFKL--DHVDRNSSYKLRVAIASATLAELQVRV---NDPNA 446
Y T W I F L D + S L + +A A A V ++P
Sbjct: 516 GPTPNDPRVEYDTTHDWTINFPLSEDDLAERSKATLTIQLAGAKAASGNTDVYNASEPYT 575
Query: 447 NRPLFT---------TGLIG---RDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQ 494
N L + T LIG + I R + + + P G N + L
Sbjct: 576 NLALESYINDQAEPLTLLIGFNQSSSCIVRSAVSCYQVRSRMEFPADWLKVGNNVLTLHL 635
Query: 495 P 495
P
Sbjct: 636 P 636
>sp|A1D144|RGLB_NEOFI Probable rhamnogalacturonate lyase B OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=rglB PE=3 SV=1
Length = 658
Score = 72.0 bits (175), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 120/561 (21%), Positives = 196/561 (34%), Gaps = 85/561 (15%)
Query: 4 GSSGFYSYAIYEHLKEWPAFTLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLSTGRG 63
G +G + ++ + E F F R + + + + PLP + +
Sbjct: 129 GETGLHMFSRLAYYNETTPFLRNLQEFRTLFRPNTQLWTHLTSSELQTAPLPSKNAVSK- 187
Query: 64 QPLAYPEAVQLVNPTDPEHQGEVDD---KYQYSCENKDLKVHGWICRTT-----PVGFWL 115
Q + + N D + + + KY +S + +D VHG T G WL
Sbjct: 188 QVVVQDATWRFNNTPDDAYYTQFSEYFTKYTFSNQWRDNDVHGLYGDGTNSNGSTYGAWL 247
Query: 116 IIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKVFGPVFIYL 175
++ + GPL +LT V +S H+ G D + FGP F
Sbjct: 248 VM-----NTKGPLHSDLT--VDGIVYNYIVSNHHGEGTPNITNGFD----RTFGPQFYLF 296
Query: 176 NSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPAS-----EDFQKSEERGCVSGRLLVQDS 230
N L K+ SW F S + S +RG V GR+ +
Sbjct: 297 NGGKGSTSSLQDLRSEAAKLADP--SWNAEFYDSIAKHVVGYVPSSKRGSVDGRVKLPKG 354
Query: 231 ND----VISANGAYV---GLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNL 283
+++ +G Y + P YQ+WT D G F I + G Y L
Sbjct: 355 ATNPIAILTVDGQYFQDNSVVP-----------SSYQYWTDIDTSGKFRIDRVVEGKYRL 403
Query: 284 YAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREF-NVPDP 342
+ G GD+ D VT+ +G + + ++ G +W +G PD+S+ EF +
Sbjct: 404 TVYADGIFGDFVRDG-VTVKAGKTTTVKE-KWDAESAGKEVWRLGTPDKSSGEFRHGVAR 461
Query: 343 DPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVYTIGVSDYSKDW------FFAQVVR 396
DP + ++ P+ +G + ++L D Y IG SD + D+ F
Sbjct: 462 DPTHP----LHPPEYLIYWGAYDWQSDLPKGID--YRIGSSDPATDFNTVHWSVFGPTPD 515
Query: 397 EMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPL------ 450
D + W+I F L +S K + I A + NA+ P
Sbjct: 516 NPDVEYNTTHDWKINFSLTKKQLRNSKKATLTIQLAGAKTASGNTDVYNASEPYINLSHE 575
Query: 451 -----------FTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTS 499
F G + I R + + + P GENT+ L P +
Sbjct: 576 SYINDQKEPLSFVIGFNQSSSCIVRSAVSCYQVRSRMEFPADWLKVGENTLTLHLPYNAT 635
Query: 500 PFQG--------IMYDYIRLE 512
+ + YD +RLE
Sbjct: 636 DTETAILPATVYVQYDALRLE 656
>sp|Q2U5P7|RGLC_ASPOR Probable rhamnogalacturonate lyase C OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=rglC PE=3 SV=1
Length = 695
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 113/470 (24%), Positives = 177/470 (37%), Gaps = 68/470 (14%)
Query: 1 MLRGS-SGFYSYAIYEHLKEW-PAF-TLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPED 57
LRG +G ++++ + E P+ +LG+ R F+ + + + +D + PL
Sbjct: 126 FLRGEETGLHAFSRVTYFNETTPSLRSLGELRTLFRPSTDLWTHFSTSDGNYGPKPL--- 182
Query: 58 LSTGRGQPLAYPEAVQLV-NPTDPEHQGEVDD---KYQYSCENKDLKVHGWICRTT---- 109
G L +A + N TD + + D KY + ++ VHG +
Sbjct: 183 ---GSNSGLVVQDATTYIGNVTDDPYVSQYSDYFTKYTLAESWRNHDVHGLFSDGSSSSD 239
Query: 110 --PVGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKV 167
G WL+ + E GGPL +L V +SGH+ G D W
Sbjct: 240 GSTFGAWLVHNTVETYYGGPLHSDLV--VDGIVYNYLVSGHHGAPTPNLTHGFDRTW--- 294
Query: 168 FGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPASE--DFQKSEERGCVSGRL 225
GP F Y N L DA E + Y+ A +F S R G++
Sbjct: 295 -GPQFYYFNRGDSETTLADLRADAAKYADPEWNAEFYDSIADHIPNFTPSTGRTTFKGKV 353
Query: 226 LVQDSND----VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNY 281
+ V+S +G L + TE Q+W D+ G FSI + G Y
Sbjct: 354 SLPKGAKRPIIVLSEDGQDFQL------NVFNTES--LQYWAEIDKSGSFSIPRVVEGTY 405
Query: 282 NLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREF---N 338
+ + G + D + + S S K ++ G +W IGIPD+S+ E+
Sbjct: 406 RITIYADEIFGWFIQDHVKVLKSQS--KDYSFTWKEESAGKEIWRIGIPDKSSGEYLHGY 463
Query: 339 VPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPN---EDLVYTIGVSDYSKD-----W- 389
PD P++ R Y W +Y YP E + + +G SD S+D W
Sbjct: 464 APDTSKPL-------QPEQHRIY--WGKYD--YPADFPEGINFHVGKSDPSQDLNYIHWA 512
Query: 390 FFAQVVREMDNKTY--QGTTWQIKFKL--DHVDRNSSYKLRVAIASATLA 435
FF + + Y W + F L D + ++ V IA A A
Sbjct: 513 FFPSQGNHLRTEPYYDNVNNWTVTFDLTADQLHNTNTATFTVQIAGAKTA 562
>sp|Q5B5P1|RGLC_EMENI Probable rhamnogalacturonate lyase C OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=rglC PE=3 SV=1
Length = 1041
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 165/443 (37%), Gaps = 60/443 (13%)
Query: 1 MLRGS-SGFYSYAIYEHLKEWPAFT--LGQTRFTFKLRKEKFRYMVIADNRHRQMPLPED 57
LRG +G ++++ + E F LG+ R F+ + + ++ + MPL
Sbjct: 124 FLRGEETGLHAFSRVTYYNESDYFLRGLGELRTLFRPNTNLWTHFSGSEGNYGPMPLSST 183
Query: 58 LSTGRGQPLAYPEAVQLVNPTDPEHQGEVDD---KYQYSCENKDLKVHGWICRTTP---- 110
Y L + TD + + D KY + +D VHG +
Sbjct: 184 EKITVQDATTY-----LGDTTDDPYVSQYSDYFTKYTLTESWRDHDVHGHFSNGSTSGDG 238
Query: 111 --VGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAVFLSGHYAGKYMETHIGQDEPWKKVF 168
G WL+ + E GGPL +L V +SGHY G D + F
Sbjct: 239 NTYGAWLVHNTRETYYGGPLHADLV--VDGIVYNYIVSGHYGAPNPNLTHGFD----RTF 292
Query: 169 GPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPASE--DFQKSEERGCVSGRLL 226
GP + + NS G L DA E + Y+ A ++ S R G++
Sbjct: 293 GPQYYHFNSGGPGTTLEELRADAAQYASPEWNAEFYDSIAKHIPNYVPSTGRTTFRGKV- 351
Query: 227 VQDSNDVISANGAYVGLAPPGDVGSWQTECKD-YQFWTTADEDGCFSIKNIRTGNYNLYA 285
N A + L+ KD Q+W D G F+I + G Y +
Sbjct: 352 ----NLPKGAKKPIIVLSENEQDFQLNVFKKDSLQYWAEIDGSGAFTIPRVVKGTYRVTI 407
Query: 286 WVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREF---NVPDP 342
+ G + D + I S ++ ++ G +W IG+PD+S+ EF PD
Sbjct: 408 YADEIFGWFIKDNVKVIGSNAHT----FTWKEETAGKEIWRIGVPDKSSGEFLHGYAPDT 463
Query: 343 DPKYVNRLFVNHPDRFRQYGLWSRYTELYPN---EDLVYTIGVSDYSKD-----W-FFAQ 393
P+++R Y W +Y YP+ E + Y +G SD +KD W FF
Sbjct: 464 SKPL-------QPEQYRIY--WGKYD--YPSDFPEGVNYHVGKSDPAKDLNYIHWSFFPS 512
Query: 394 VVREMDNKTY--QGTTWQIKFKL 414
+ N+ Y W I F L
Sbjct: 513 QGNHLRNEPYYQNVNNWTITFDL 535
>sp|Q2U0Q1|RGLA_ASPOR Probable rhamnogalacturonate lyase A OS=Aspergillus oryzae (strain
ATCC 42149 / RIB 40) GN=rglA PE=3 SV=1
Length = 528
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 98/238 (41%), Gaps = 36/238 (15%)
Query: 258 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 316
D Q+WT DG F+ ++ G+Y + + G+Y+ ++ V++T GS+ +
Sbjct: 301 DAQYWTYTSSDGSFTSPAMKPGDYTMVY----YQGEYKVAETSVSVTVGSSTSKD--ISG 354
Query: 317 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 376
G T+++IG D + F N ++ R + SR + P L
Sbjct: 355 SVETGDTIFKIGDWDGTPTGFR--------------NAENQLRMHPSDSRMSSWGP---L 397
Query: 377 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 435
YT+G S+ + D+ A D T IKF ++ LR+ S
Sbjct: 398 TYTVGSSELT-DFPMAAFKGVNDPVT-------IKFTATSAQTGAA-TLRIGTTLSFAGG 448
Query: 436 ELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 493
Q +ND + P T L R + R GL +Y VNIP +EGENTI +
Sbjct: 449 RPQATINDYEGSAPSAPTNLNSR--GVTRGAYRGLGEVYDVNIPSGTIVEGENTITIS 504
>sp|B8NCU7|RGLA_ASPFN Probable rhamnogalacturonate lyase A OS=Aspergillus flavus (strain
ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC
167) GN=rglA PE=3 SV=1
Length = 528
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 99/238 (41%), Gaps = 36/238 (15%)
Query: 258 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 316
D Q+WT DG F+ ++ G+Y + + G+Y+ ++ V++T+GS+ +
Sbjct: 301 DAQYWTYTSSDGSFTSPAMKPGDYTMVY----YQGEYKVAETSVSVTAGSSTSKD--ISG 354
Query: 317 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 376
G T+++IG D + F N ++ R + SR + P L
Sbjct: 355 FVETGDTIFKIGDWDGTPTGFR--------------NAENQLRMHPSDSRMSSWGP---L 397
Query: 377 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 435
YT+G S+ + D+ A D T IKF ++ LR+ S
Sbjct: 398 TYTVGSSELT-DFPMAAFKGVNDPVT-------IKFTATSAQTGAA-TLRIGTTLSFAGG 448
Query: 436 ELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 493
Q +ND + P T L R + R GL +Y VNIP +EGENTI +
Sbjct: 449 RPQATINDYEGSAPSAPTNLNSR--GVTRGAYRGLGEVYDVNIPSGTIVEGENTITIS 504
>sp|A2R2L1|RGLA_ASPNC Probable rhamnogalacturonate lyase A OS=Aspergillus niger (strain
CBS 513.88 / FGSC A1513) GN=rglA PE=3 SV=2
Length = 531
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 95/237 (40%), Gaps = 34/237 (14%)
Query: 258 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEP 317
D Q+WT G F+ ++ G Y + + +V + + VT+++GS+ +
Sbjct: 301 DAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYV---VATSEVTVSAGSSTSKD--ISGS 355
Query: 318 PRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLV 377
G T+++IG D F N ++ R + SR ++ P L
Sbjct: 356 VETGTTIFKIGDWDGQPTGFR--------------NAENQLRMHPSDSRMSDWGP---LT 398
Query: 378 YTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLAE 436
YT+G S + F + + +++ IKF D+ + LR+ S
Sbjct: 399 YTVGSSSLTD--FPMAIFKSVNSPV------TIKFTATS-DQTGAATLRIGTTLSFAGGR 449
Query: 437 LQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 493
Q +ND + P T L R + R G +Y V++P +EGENTI +
Sbjct: 450 PQATINDYEGSAPSAPTNLDSR--GVTRGAYRGYGDVYDVSVPEGTIVEGENTITIS 504
>sp|Q5AX45|RGLA_EMENI Rhamnogalacturonate lyase A OS=Emericella nidulans (strain FGSC A4
/ ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=rglA
PE=2 SV=1
Length = 527
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 89/238 (37%), Gaps = 35/238 (14%)
Query: 257 KDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYE 316
D Q+WT DG F+ ++ G Y + + F ++ VT+++GS+ +
Sbjct: 300 NDAQYWTYTASDGSFTSPAMKPGTYTMKYYQGEFP---VAETTVTVSAGSSTTKN--ISG 354
Query: 317 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 376
+ G T+++IG D F D + HP R WS
Sbjct: 355 SVKTGTTIFKIGEWDGQPTGFRNADKQLRM-------HPSDSRM-DSWSS---------- 396
Query: 377 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 435
YT+G S S F V + ++N IKF ++ LR+ S
Sbjct: 397 TYTVGSSSLSD--FPMAVFKSVNNPV------TIKFTATSAQTGAA-TLRIGTTLSFAGG 447
Query: 436 ELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 493
Q +N P T L R + R GL +Y V++P + GENTI +
Sbjct: 448 RPQATINSYTGPAPSAPTNLNSR--GVTRGAYRGLGEVYDVSVPAGTIVTGENTITIS 503
>sp|Q8NJK5|RGLA_ASPNG Rhamnogalacturonate lyase A (Fragment) OS=Aspergillus niger GN=rglA
PE=3 SV=1
Length = 499
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 93/233 (39%), Gaps = 34/233 (14%)
Query: 258 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEP 317
D Q+WT G F+ ++ G Y + + +V + + VT+++GS+ +
Sbjct: 300 DAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYV---VATSEVTVSAGSSTSKD--ISGS 354
Query: 318 PRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLV 377
G T+++IG D F N ++ R + SR ++ P L
Sbjct: 355 VETGTTIFKIGDWDGQPTGFR--------------NAENQLRMHPSDSRMSDWGP---LT 397
Query: 378 YTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRV-AIASATLAE 436
YT+G S + F + + +++ IKF D+ + LR+ S
Sbjct: 398 YTVGSSSLTD--FPMAIFKSVNSPV------TIKFTATS-DQTGAATLRIRTTLSFAGGR 448
Query: 437 LQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENT 489
Q +ND + P T L R + R G +Y V++P +EGENT
Sbjct: 449 PQATINDYEGSAPSAPTNLDSR--GVTRGAYRGYGDVYDVSVPEGTIVEGENT 499
>sp|Q00019|RGLA_ASPAC Rhamnogalacturonate lyase A OS=Aspergillus aculeatus GN=rglA PE=1
SV=1
Length = 527
Score = 40.4 bits (93), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 91/236 (38%), Gaps = 36/236 (15%)
Query: 260 QFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYEPP 318
Q+WT G F+ ++ G Y + + G+Y + + VT+++GS +
Sbjct: 302 QYWTYTSSSGSFTSPAMKPGTYTMVY----YQGEYAVATSSVTVSAGSTTTKN--ISGSV 355
Query: 319 RDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVY 378
+ G T+++IG D F N ++ R + SR + P L Y
Sbjct: 356 KTGTTIFKIGEWDGQPTGFR--------------NAANQLRMHPSDSRMSSWGP---LTY 398
Query: 379 TIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLAEL 437
T+G S + F V + ++N IKF ++ LR+ S
Sbjct: 399 TVGSSALTD--FPMAVFKSVNNPV------TIKFTATSAQTGAA-TLRIGTTLSFAGGRP 449
Query: 438 QVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 493
Q +N + P T L R + R GL +Y V+IP + G NTI +
Sbjct: 450 QATINSYTGSAPAAPTNLDSR--GVTRGAYRGLGEVYDVSIPSGTIVAGTNTITIN 503
>sp|Q0CVU1|RGLA_ASPTN Probable rhamnogalacturonate lyase A OS=Aspergillus terreus (strain
NIH 2624 / FGSC A1156) GN=rglA PE=3 SV=2
Length = 531
Score = 40.4 bits (93), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 97/236 (41%), Gaps = 36/236 (15%)
Query: 260 QFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYEPP 318
Q+WT DG F+ ++ G Y + A+ + G+YR ++ VT+++GS+ +
Sbjct: 303 QYWTYTASDGSFTSPAMKPGTYTM-AY---YQGEYRVAETSVTVSAGSSTTKN--ISGSV 356
Query: 319 RDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVY 378
+ G T+++IG D D + F+N + R + SR + P + Y
Sbjct: 357 KTGTTIFKIG------------DWDGQPTG--FLNADKQLRMHPSDSRMSSWGP---VTY 399
Query: 379 TIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLAEL 437
T+G S S F + + +++ IKF ++ LR+ S
Sbjct: 400 TVGSS--SVGSFPMALFKSVNSPV------TIKFTATSAQTGAA-TLRIGTTLSFAGGRP 450
Query: 438 QVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 493
Q +N P T L R + R GL +Y V+IP + G NTI +
Sbjct: 451 QATINSYTGPTPSAPTNLNSR--GVTRGAYRGLGEVYDVSIPAGTIVAGTNTITIN 504
>sp|A3PEU8|CCS1_PROM0 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9301) GN=ccsB PE=3 SV=1
Length = 428
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 30/103 (29%)
Query: 304 SGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFNVPDPDPKY--VNRLFVNHPDRFRQY 361
S +NIK+ D E DG IP + + + D K+ V VNHP RF+
Sbjct: 207 SKANIKLVDFSIERESDG-------IPKQFISKLDFTSEDSKFNEVKTAKVNHPIRFK-- 257
Query: 362 GLWSRYTELYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQ 404
G++ Y DW + +V E+DN YQ
Sbjct: 258 -------------------GLTIYQADWAISNIVLEIDNILYQ 281
>sp|A1C995|RGLA_ASPCL Probable rhamnogalacturonate lyase A OS=Aspergillus clavatus
(strain ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 /
NRRL 1) GN=rglA PE=3 SV=1
Length = 528
Score = 37.7 bits (86), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 89/236 (37%), Gaps = 36/236 (15%)
Query: 260 QFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYEPP 318
Q+WT DG F+ ++ G Y + + G+Y+ ++ VT+ +GS I +
Sbjct: 303 QYWTYTASDGSFTSPAMKPGTYTMVY----YQGEYKVAETSVTVRAGSKITKN--ISGSV 356
Query: 319 RDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVY 378
+ G T+++IG D F D + HP R W L Y
Sbjct: 357 KTGKTIFKIGEWDGQPTGFRNADKQLRM-------HPSDSRM-AAWG---------PLTY 399
Query: 379 TIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLAEL 437
T+G S S F V + ++N IKF ++ LR+ S
Sbjct: 400 TVGRSAPSD--FPMAVFKSVNNPV------TIKFTASAAQTAAA-TLRIGTTLSFAGGRP 450
Query: 438 QVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 493
Q ++N A P L R + R GL +Y V IP + G NTI +
Sbjct: 451 QAKINSYTAAAPPAPKNLDSR--GVTRGAYRGLGEVYDVAIPAGTIVAGVNTITIS 504
>sp|Q4W9T6|RGLA_ASPFU Probable rhamnogalacturonate lyase A OS=Neosartorya fumigata
(strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=rglA PE=3 SV=1
Length = 528
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 46/243 (18%)
Query: 258 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 316
+ Q+WT DG F+ ++ G Y + + G+Y+ + V++++GS +
Sbjct: 301 EAQYWTYTASDGSFTSPAMKPGTYTMVY----YQGEYKVASTSVSVSAGSTTTKN--ISG 354
Query: 317 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 376
G T+++IG D F N ++ R + SR + P L
Sbjct: 355 SVTTGKTIFKIGEWDGQPTGFR--------------NAANQLRMHPSDSRMSSWGP---L 397
Query: 377 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 435
YT+G S S F + + +++ IKF + + LR+ S
Sbjct: 398 TYTVGSSSLSD--FPMAIFKSVNSPV------TIKFTASS-SQTGAATLRIGTTLSFAGG 448
Query: 436 ELQVRVND-----PNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTI 490
QV VN P+A + L + G + R GL +Y V IP + G NTI
Sbjct: 449 RPQVTVNSWTGPIPSAPKDLNSRG-------VTRGAYRGLGEVYDVAIPAGTIVAGTNTI 501
Query: 491 FLK 493
+
Sbjct: 502 TIS 504
>sp|B0YEH9|RGLA_ASPFC Probable rhamnogalacturonate lyase A OS=Neosartorya fumigata
(strain CEA10 / CBS 144.89 / FGSC A1163) GN=rglA PE=3
SV=1
Length = 528
Score = 37.0 bits (84), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 94/243 (38%), Gaps = 46/243 (18%)
Query: 258 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 316
+ Q+WT DG F+ ++ G Y + + G+Y+ + V++++GS +
Sbjct: 301 EAQYWTYTASDGSFTSPAMKPGTYTMVY----YQGEYKVASTSVSVSAGSTTTKN--ISG 354
Query: 317 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 376
G T+++IG D F N ++ R + SR + P L
Sbjct: 355 SVTTGKTIFKIGEWDGQPTGFR--------------NAANQLRMHPSDSRMSSWGP---L 397
Query: 377 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 435
YT+G S S F + + +++ IKF + + LR+ S
Sbjct: 398 TYTVGSSSLSD--FPMAIFKSVNSPV------TIKFTASS-SQTGAATLRIGTTLSFAGG 448
Query: 436 ELQVRVND-----PNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTI 490
QV VN P+A + L + G + R GL +Y V IP + G NTI
Sbjct: 449 RPQVTVNSWTGPIPSAPKDLNSRG-------VTRGAYRGLGEVYDVAIPAGTIVAGTNTI 501
Query: 491 FLK 493
+
Sbjct: 502 TIS 504
>sp|Q318T2|CCS1_PROM9 Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain MIT 9312) GN=ccsB PE=3 SV=1
Length = 428
Score = 37.0 bits (84), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 30/103 (29%)
Query: 304 SGSNIKMGDLVYEPPRDGPTLWEIGIPDR--SAREFNVPDPDPKYVNRLFVNHPDRFRQY 361
S +NIK+ + E DG IP + S F+ D + + VNHP RF+
Sbjct: 207 SKANIKLVNFSIERESDG-------IPKQFISKLNFSSEDLNINEIKTAKVNHPIRFK-- 257
Query: 362 GLWSRYTELYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQ 404
G++ Y DW + VV E+DN YQ
Sbjct: 258 -------------------GLTIYQADWAISNVVLEIDNILYQ 281
>sp|A2BT34|CCS1_PROMS Cytochrome c biogenesis protein CcsB OS=Prochlorococcus marinus
(strain AS9601) GN=ccsB PE=3 SV=1
Length = 428
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 26/101 (25%)
Query: 304 SGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGL 363
S +N+K+ D E DG I + S+ N+ + + VNHP RF+
Sbjct: 207 SRANVKLVDFSIERESDGVPKQFISKLNFSSENLNLNE-----IKTTKVNHPIRFK---- 257
Query: 364 WSRYTELYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQ 404
G++ Y DW + +V E+DN YQ
Sbjct: 258 -----------------GLTIYQADWAISNIVLEIDNILYQ 281
>sp|A1D9P9|RGLA_NEOFI Probable rhamnogalacturonate lyase A OS=Neosartorya fischeri
(strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181)
GN=rglA PE=3 SV=1
Length = 528
Score = 34.3 bits (77), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 55/243 (22%), Positives = 90/243 (37%), Gaps = 46/243 (18%)
Query: 258 DYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYR-SDALVTITSGSNIKMGDLVYE 316
+ Q+WT DG F+ ++ G Y + + G+Y+ + V++++GS +
Sbjct: 301 EAQYWTYTASDGSFTSPAMKPGTYTMVY----YQGEYKVASTSVSVSAGSTTTKN--ISG 354
Query: 317 PPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDL 376
G T+++IG D F N ++ R + SR P L
Sbjct: 355 SVTTGKTIFKIGEWDGQPTGFR--------------NAANQLRMHPSDSRMASWGP---L 397
Query: 377 VYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLA 435
YT+G S S F + + N IKF + + LR+ S
Sbjct: 398 TYTVGSSSLSD---FPMAIFKSTNSPV-----TIKFTASS-SQTGAATLRIGTTLSFAGG 448
Query: 436 ELQVRVND-----PNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTI 490
Q +VN P+A + L + G + R G +Y V IP + G NTI
Sbjct: 449 RPQAKVNSFTGPVPSAPKDLNSRG-------VTRGAYRGFGEVYDVAIPAGTIVAGTNTI 501
Query: 491 FLK 493
+
Sbjct: 502 TIS 504
>sp|Q9P6J6|BGLS_SCHPO Putative beta-glucosidase OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=SPBC1683.04 PE=3 SV=1
Length = 832
Score = 33.1 bits (74), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Query: 370 LYPNEDLVYTIGVSDYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHV-DRNS------- 421
L P+ED VY G+S + F V +DNKT Q T F+ + +RNS
Sbjct: 452 LIPDEDAVYEFGISVFGTALLFIDDVLLIDNKTKQTPTNH-TFEFGTIEERNSIYLKKGR 510
Query: 422 SYKLRVAIASATLAELQVRVNDPNANR 448
Y +RV SA L ++ R
Sbjct: 511 KYNVRVEYGSAATYTLSTNLSPSTGGR 537
>sp|P29119|FURI1_XENLA Furin-1 OS=Xenopus laevis GN=furin PE=2 SV=1
Length = 783
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 438 QVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENT 489
Q R N NR T G A+A +GI G+ + Y+ NI G R ++GE T
Sbjct: 181 QPRYTQLNDNR--HGTRCAGEVAAVANNGICGVGIAYNANIGGVRMLDGEVT 230
>sp|P78710|ASD1_NEUCR Putative rhamnogalacturonase OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=asd-1 PE=2 SV=1
Length = 540
Score = 32.3 bits (72), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 103/471 (21%), Positives = 165/471 (35%), Gaps = 86/471 (18%)
Query: 25 LGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLSTGRGQPLAYPEAVQLVNPTDPEHQG 84
+G+ RF +L +K Y + P E +T V +VN G
Sbjct: 130 IGELRFIARLLSDKLPY---------EYPYGEVSTTKGSSSTVEGSDVFVVN-------G 173
Query: 85 EVDDKYQYSCENKDLKVHGWICRTTPVGFWLIIPSDEFRSGGPLKQNLTSHVGPTTLAVF 144
+ K+ S D H + +I P E SGGP +++ S+ + ++
Sbjct: 174 QTRSKFYSSTRFIDEDSHCVYGGSDLTHVCIITPQQESSSGGPFFRDIDSNNAGESTNLY 233
Query: 145 LSGHYAGKYMET-HIGQDEPWKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWP 203
YM + H+ ++ + GP YL + + P K+ + SW
Sbjct: 234 -------NYMNSGHVQTEDRRMGLHGP---YLMTFSRSGIP---------KLKTVDISW- 273
Query: 204 YNFPASEDFQKSEERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWT 263
+ + +RG V GR A G P G G Q+W
Sbjct: 274 FGELGVTGYVPDSQRGTVIGR-----------ATGI-----PSGFEGVVHWYNAAAQYWV 317
Query: 264 TADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVYEPPRDGPT 323
+G F+ ++ G Y + + F + + VT+++G + T
Sbjct: 318 RTAPNGDFTSPKMKPGTYTMVLYQTEF---KVATSTVTVSAG-KTTTASIASTFNTSHTT 373
Query: 324 LWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVYTIGVS 383
L++IG D F D + HP SR + P L YT+G S
Sbjct: 374 LFKIGEYDGQPTGFRNAD-------KFLRMHPSD-------SRMSSWGP---LTYTVGSS 416
Query: 384 DYSKDWFFAQVVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIA-SATLAELQVRVN 442
S + F V + ++N IKF L ++ LR+A S A QV VN
Sbjct: 417 --SLNDFPMAVFKSVNNPV------TIKFNLGSAPSQAT-TLRIATTLSFAGARPQVVVN 467
Query: 443 DPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 493
+A P + R + R G +Y V +P + I G NTI +
Sbjct: 468 GWSAPAPAAPAKIDSR--GVTRGAYRGYGEVYDVAVPAGKLISGTNTITIS 516
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.443
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,241,793
Number of Sequences: 539616
Number of extensions: 10297311
Number of successful extensions: 17155
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 17114
Number of HSP's gapped (non-prelim): 32
length of query: 517
length of database: 191,569,459
effective HSP length: 122
effective length of query: 395
effective length of database: 125,736,307
effective search space: 49665841265
effective search space used: 49665841265
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)