Query 010135
Match_columns 517
No_of_seqs 184 out of 306
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 20:40:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010135.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010135hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nkg_A Rhamnogalacturonase B; 100.0 6E-113 2E-117 920.0 39.5 413 1-513 84-508 (508)
2 2nsm_A Carboxypeptidase N cata 98.0 8.3E-06 2.8E-10 86.6 8.7 96 218-337 320-416 (439)
3 1h8l_A Carboxypeptidase GP180 97.9 2.5E-05 8.7E-10 81.3 10.3 78 218-316 300-378 (380)
4 3mn8_A LP15968P; catalytic dom 97.9 1.9E-05 6.6E-10 83.9 8.1 90 219-329 337-428 (435)
5 1uwy_A Carboxypeptidase M; met 97.8 1.8E-05 6.1E-10 83.9 6.9 92 218-330 295-390 (426)
6 1xpn_A Hypothetical protein PA 97.1 0.0031 1.1E-07 58.7 10.5 105 205-310 28-166 (170)
7 3qec_A Putative carbohydrate b 96.9 0.0066 2.2E-07 55.5 10.6 95 215-310 20-146 (150)
8 4aw7_A GH86A beta-porphyranase 96.6 0.0032 1.1E-07 68.7 7.5 72 420-498 502-575 (591)
9 2w87_A Esterase D, XYL-CBM35; 96.4 0.016 5.6E-07 51.7 10.1 90 410-515 41-132 (139)
10 2wz8_A Cellulosome protein doc 96.4 0.014 4.6E-07 53.5 9.4 87 410-513 49-148 (156)
11 2w3j_A Carbohydrate binding mo 96.0 0.02 6.9E-07 51.5 8.5 87 410-514 41-129 (145)
12 2w47_A Lipolytic enzyme, G-D-S 95.7 0.027 9.3E-07 50.3 8.1 89 410-515 42-132 (144)
13 2vzp_A Aocbm35, EXO-beta-D-glu 94.5 0.099 3.4E-06 45.4 7.7 85 410-511 41-127 (127)
14 2bgo_A Endo-B1,4-mannanase 5C; 94.5 0.17 5.6E-06 45.6 9.1 89 406-515 34-123 (140)
15 3kcp_A Cellulosomal-scaffoldin 94.0 0.092 3.1E-06 53.3 7.2 62 217-291 156-223 (321)
16 2xsu_A Catechol 1,2 dioxygenas 92.1 0.32 1.1E-05 49.4 7.8 63 217-282 135-202 (312)
17 2bum_B Protocatechuate 3,4-dio 91.3 0.43 1.5E-05 46.7 7.5 65 216-283 76-150 (241)
18 2boy_A 3-chlorocatechol 1,2-di 91.0 0.27 9.1E-06 48.5 5.7 66 215-283 99-169 (254)
19 2azq_A Catechol 1,2-dioxygenas 90.7 0.57 1.9E-05 47.5 8.0 65 216-283 130-199 (311)
20 1uxz_A Cellulase B; carbohydra 90.2 1.2 4.2E-05 38.9 8.8 77 420-513 52-129 (131)
21 2bum_A Protocatechuate 3,4-dio 89.8 0.46 1.6E-05 45.5 6.1 64 216-282 50-124 (209)
22 3t63_M 3,4-PCD, protocatechuat 89.6 0.64 2.2E-05 45.4 7.0 67 214-283 73-149 (238)
23 3th1_A Chlorocatechol 1,2-diox 89.4 0.36 1.2E-05 47.8 5.1 64 217-283 98-166 (260)
24 1tmx_A Hydroxyquinol 1,2-dioxy 87.6 0.9 3.1E-05 45.7 6.7 65 216-283 131-199 (293)
25 2y8k_A Arabinoxylanase, carboh 87.6 2.4 8.2E-05 45.1 10.5 87 410-515 398-484 (491)
26 3n9t_A PNPC; phospholipid bind 87.1 0.71 2.4E-05 46.4 5.6 66 215-283 126-196 (290)
27 1dmh_A 1,2-CTD, catechol 1,2-d 86.6 0.72 2.5E-05 46.8 5.4 63 218-283 133-202 (311)
28 3o5u_A Chlorocatechol 1,2-diox 86.3 0.9 3.1E-05 44.8 5.9 65 216-283 101-171 (257)
29 3t63_A 3,4-PCD, protocatechuat 86.3 0.74 2.5E-05 43.8 5.0 65 216-283 46-116 (200)
30 3hhy_A 1,2-CTD, catechol 1,2-d 85.6 0.75 2.6E-05 45.9 4.9 63 218-283 131-198 (280)
31 2cdp_A Beta-agarase 1; carbohy 85.2 2 7E-05 38.9 7.3 82 419-512 77-159 (160)
32 1w9s_A BH0236 protein, BHCBM6; 82.7 11 0.00038 33.0 10.9 82 420-513 58-140 (142)
33 1ti6_B Pyrogallol hydroxytrans 81.2 1.7 5.7E-05 43.1 5.4 48 263-315 227-274 (274)
34 3irp_X URO-adherence factor A; 79.9 3.2 0.00011 43.8 7.2 63 217-288 304-372 (429)
35 3e8v_A Possible transglutamina 77.9 13 0.00045 30.3 8.7 57 222-292 4-64 (82)
36 2h4e_A Transthyretin; amyloid, 77.8 2.4 8E-05 37.5 4.6 63 217-287 8-75 (127)
37 2v4v_A GH59 galactosidase; hyd 77.1 16 0.00055 31.4 9.9 79 421-512 49-128 (129)
38 1uxx_X Xylanase U; carbohydrat 76.4 22 0.00076 30.8 10.7 78 421-515 51-130 (133)
39 2g2n_A Transthyretin-like prot 74.1 3.6 0.00012 35.7 4.7 62 217-287 2-68 (114)
40 1tg7_A Beta-galactosidase; TIM 73.9 1.9 6.6E-05 50.0 3.8 71 408-496 855-930 (971)
41 1od3_A Putative xylanase; hydr 70.2 34 0.0012 31.0 10.7 76 421-513 90-165 (168)
42 4hg6_B Cellulose synthase subu 70.2 2 6.8E-05 47.9 2.7 74 406-496 61-139 (707)
43 1oo2_A Transthyretin; retinol- 68.7 4.5 0.00015 35.3 4.1 59 221-287 4-67 (119)
44 1f86_A Transthyretin Thr119Met 68.7 3.3 0.00011 35.9 3.3 49 234-287 14-66 (115)
45 3qva_A Transthyretin-like prot 68.5 7.9 0.00027 33.6 5.6 58 217-287 8-69 (116)
46 1uy4_A Endo-1,4-beta-xylanase 68.2 39 0.0013 29.7 10.5 76 421-513 68-143 (145)
47 4ank_A Transthyretin; hormone 66.9 3.9 0.00013 37.0 3.5 62 218-287 29-95 (147)
48 2vzs_A CSXA, EXO-beta-D-glucos 66.5 1.2 4.1E-05 52.0 0.0 86 409-511 945-1032(1032)
49 4hg6_B Cellulose synthase subu 65.5 7.6 0.00026 43.3 6.1 77 407-495 319-402 (707)
50 2ww8_A RRGA, cell WALL surface 65.3 14 0.00049 42.4 8.6 80 218-309 47-128 (893)
51 2pz4_A Protein GBS052; SPAB, G 62.6 7.7 0.00027 37.2 5.0 75 233-310 140-224 (239)
52 3fn9_A Putative beta-galactosi 62.3 4.8 0.00016 44.9 3.9 69 407-497 63-132 (692)
53 3kpt_A Collagen adhesion prote 60.6 9.3 0.00032 39.0 5.4 47 233-287 19-65 (355)
54 3c7f_A Xylanase D, endo-1,4-be 59.2 51 0.0017 34.6 11.0 81 420-512 405-485 (487)
55 3lpf_A Beta-glucuronidase; alp 57.2 9.1 0.00031 41.8 4.9 66 408-495 71-137 (605)
56 1r6v_A Subtilisin-like serine 56.4 21 0.0007 39.8 7.6 59 218-286 445-503 (671)
57 3cmg_A Putative beta-galactosi 55.6 8 0.00027 42.7 4.2 68 407-496 52-120 (667)
58 1yq2_A Beta-galactosidase; gly 53.9 8.2 0.00028 45.1 4.0 68 407-496 121-191 (1024)
59 2x5p_A FBA2, fibronectin bindi 52.9 23 0.00078 30.7 5.8 63 234-309 40-104 (121)
60 3bga_A Beta-galactosidase; NYS 52.6 8.9 0.00031 44.7 4.0 67 408-496 130-196 (1010)
61 3og2_A Beta-galactosidase; TIM 52.0 13 0.00046 43.0 5.3 68 410-494 889-960 (1003)
62 2h0e_A Transthyretin-like prot 51.9 16 0.00054 31.9 4.6 57 219-287 9-71 (121)
63 3iwv_A 5-hydroxyisourate hydro 50.5 9.2 0.00031 34.2 2.9 62 218-287 25-92 (138)
64 3phz_A Ricin B-related lectin; 50.4 26 0.00089 34.9 6.5 97 222-346 67-170 (286)
65 3gm8_A Glycoside hydrolase fam 50.0 11 0.00039 42.7 4.3 68 408-497 70-137 (801)
66 1cwv_A Invasin; integrin-bindi 48.6 76 0.0026 33.7 10.2 74 219-306 28-103 (492)
67 2je8_A Beta-mannosidase; glyco 45.9 12 0.00041 42.6 3.7 65 409-495 69-134 (848)
68 2pz4_A Protein GBS052; SPAB, G 45.6 8 0.00027 37.1 1.9 26 262-287 71-96 (239)
69 4fxt_A Uncharacterized protein 42.9 82 0.0028 29.7 8.3 63 218-289 7-70 (202)
70 3kpt_A Collagen adhesion prote 42.9 31 0.0011 35.0 5.9 63 221-286 249-313 (355)
71 1jz7_A Lactase, beta-galactosi 41.7 11 0.00037 44.0 2.5 68 407-496 122-190 (1023)
72 3d3a_A Beta-galactosidase; pro 40.5 15 0.00052 40.3 3.3 67 406-497 509-575 (612)
73 3oba_A Beta-galactosidase; TIM 39.2 11 0.00038 44.0 2.0 68 407-496 115-183 (1032)
74 3pe9_A Fibronectin(III)-like m 39.0 56 0.0019 27.1 5.9 43 260-303 43-85 (98)
75 3uaf_A TTR-52; beta barrel/san 37.6 36 0.0012 29.3 4.6 51 217-274 3-55 (117)
76 4e8d_A Glycosyl hydrolase, fam 37.2 11 0.00039 41.3 1.6 43 433-493 527-569 (595)
77 3hn5_A Putative exported prote 34.1 1E+02 0.0035 29.3 7.5 60 218-286 10-71 (215)
78 3v9f_A Two-component system se 33.7 41 0.0014 36.8 5.5 26 262-287 731-756 (781)
79 3hn3_A Beta-G1, beta-glucuroni 30.1 22 0.00076 38.6 2.4 66 408-495 81-153 (613)
80 4a2l_A BT_4663, two-component 29.8 38 0.0013 37.2 4.3 26 262-287 737-762 (795)
81 2x9z_A RRGB, cell WALL surface 28.5 90 0.0031 30.2 6.3 61 218-285 156-219 (262)
82 1b4r_A Protein (PKD1_human); P 28.5 50 0.0017 26.5 3.7 27 276-303 52-79 (80)
83 3ott_A Two-component system se 28.1 46 0.0016 36.3 4.6 26 262-287 702-728 (758)
84 4eiu_A Uncharacterized hypothe 27.2 3.3E+02 0.011 26.5 9.8 63 218-286 9-76 (249)
85 2x9x_A RRGB, cell WALL surface 26.3 23 0.0008 37.2 1.7 44 263-307 372-417 (444)
86 3cih_A Putative alpha-rhamnosi 26.1 78 0.0027 35.1 6.0 54 408-498 61-114 (739)
87 3isy_A Bsupi, intracellular pr 26.0 63 0.0021 28.0 4.1 15 275-289 89-103 (120)
88 2xtl_A Cell WALL surface ancho 25.8 24 0.00083 37.3 1.7 45 263-308 378-424 (452)
89 3nbc_A Ricin B-like lectin; la 24.7 43 0.0015 29.8 3.0 49 222-282 15-71 (148)
90 2x9x_A RRGB, cell WALL surface 23.8 1.2E+02 0.0042 31.7 6.7 62 218-286 159-223 (444)
91 3bwu_D FIMD, outer membrane us 22.4 82 0.0028 26.7 4.2 15 275-289 27-41 (125)
92 3qdh_A Fimbrial structural sub 21.5 70 0.0024 31.6 4.0 87 220-310 156-281 (290)
93 1tg7_A Beta-galactosidase; TIM 21.4 1E+02 0.0035 35.8 5.9 69 407-495 692-761 (971)
94 4b0m_A F1 capsule-anchoring pr 21.4 50 0.0017 28.9 2.6 19 271-289 22-40 (136)
95 3t04_D Monobody 7C12; engineer 20.9 55 0.0019 26.2 2.7 37 267-304 62-101 (103)
96 4d8m_A Pesticidal crystal prot 20.8 4.5E+02 0.015 28.7 10.4 95 406-513 486-584 (587)
No 1
>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A
Probab=100.00 E-value=6.3e-113 Score=920.04 Aligned_cols=413 Identities=21% Similarity=0.283 Sum_probs=370.5
Q ss_pred CCCCCceeEEEEEeeccccCCCCCCCceEEEEecCccCccceeeeccccccCCCCcCCCCCCCccccccceEEeeCCCCC
Q 010135 1 MLRGSSGFYSYAIYEHLKEWPAFTLGQTRFTFKLRKEKFRYMVIADNRHRQMPLPEDLSTGRGQPLAYPEAVQLVNPTDP 80 (517)
Q Consensus 1 ~~~g~~g~Y~y~i~~~~~~~p~~~lge~R~v~Rl~~~~f~~~~~~d~r~~~~P~~~d~~~~~~~~~~~~e~v~~~~~~~~ 80 (517)
||+|++|||||+++++ +++|+|+|+||||++++|++. ++.||+|+++ .+++ +++|++...
T Consensus 84 ~~~g~sg~Y~y~~~~~-----~~~lge~R~v~Rl~~~~f~~~------~r~~~~p~~~---~~~~-v~~~d~~~l----- 143 (508)
T 1nkg_A 84 VHNGDPIIHMATYITA-----EPSIGELRFIARLNSDLLPNE------EPFGDVSTTA---DGTA-IEGSDVFLV----- 143 (508)
T ss_dssp EETTCCEEEEEEEESS-----CCTTSCEEEEEEECTTTCCEE------ETTGGGGCCT---TCEE-EETTTEEEE-----
T ss_pred EeCCCceEEEEEeecc-----CCCCCceEEEEEcChhhCCCc------cccCCCCccc---cCcE-eeeccceee-----
Confidence 6899999999998864 679999999999999999762 5888999775 4555 667877555
Q ss_pred CCCCeeeeeeeecccccCCcEEEEEeCCCCeEEEEEcCCCccccCCCceeccccccCC---cEEEEEeecccccccceee
Q 010135 81 EHQGEVDDKYQYSCENKDLKVHGWICRTTPVGFWLIIPSDEFRSGGPLKQNLTSHVGP---TTLAVFLSGHYAGKYMETH 157 (517)
Q Consensus 81 ~~~G~~~sKY~~s~~~~d~~vhG~~s~g~~vG~W~I~~s~E~~sGGP~kqdL~~h~g~---~~l~y~~s~H~~g~~~~~~ 157 (517)
+|+++||||||+++||++||||+ ++.||||||+|++||++||||||||++|+++ ++|+||+|+|++ +++
T Consensus 144 --~G~~~~KY~~s~~~~D~~vhG~~--~~~vG~w~I~~s~E~~sGGP~kqdL~~h~~~~~~~~~~y~~s~H~~----t~~ 215 (508)
T 1nkg_A 144 --GSETRSKFYSSERFIDDQRHCIA--GDAHRVCMILNQYESSSGGPFHRDINSNNGGSYNALYWYMNSGHVQ----TES 215 (508)
T ss_dssp --TTEEEEGGGGCCBGGGCSEEEEE--CSSCEEEEECCCCTTCSSCTTCBCCCEEECSSCEEEEEEEECSTTC----CSC
T ss_pred --CCEEccceeccccceecceEEEE--CCCeEEEEEcCCcccccCCCcchhhhccCCcccceeeeeEeecccc----ccc
Confidence 49999999999999999999999 5999999999999999999999999999999 899999999975 566
Q ss_pred cCCCCCCceeeceEEEEEcCCCCCCCchhhHHHHHHHHhhhccCCCCCCCCC---CCCCCCCCCeEEEEEEEEecCCCcc
Q 010135 158 IGQDEPWKKVFGPVFIYLNSAADGDDPLWLWEDAKIKMMSEVQSWPYNFPAS---EDFQKSEERGCVSGRLLVQDSNDVI 234 (517)
Q Consensus 158 ~~~Ge~w~k~~GP~~~y~n~g~~~~~~~~l~~Da~~~~~~E~~~wpy~f~~s---~~y~~~~~RG~VsG~v~~~d~~~~~ 234 (517)
++. |||||||||||+|++++ ++|||+|++| ++||++++||+|+|+|+ + .
T Consensus 216 ~~~-----g~~GP~~~y~n~g~~~~-----------------~~wpysf~~s~~~~~y~~~~~RGtVsG~V~---G---~ 267 (508)
T 1nkg_A 216 YRM-----GLHGPYSMYFSRSGTPS-----------------TSIDTSFFADLDIKGYVAASGRGKVAGTAS---G---A 267 (508)
T ss_dssp CCC-----EEEEEEEEEEESSCCCC-----------------SCCCCGGGGGTTCTTCCCGGGCBEEEEEEE---S---S
T ss_pred ccc-----cccccEEEEECCCCCCC-----------------CCCCCccccccCccCCcCcccccEEEEEEc---C---c
Confidence 675 59999999999999863 5999999999 99999999999999988 3 3
Q ss_pred -ccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEECceeeeeeeeeEEEEeCCceeeecce
Q 010135 235 -SANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDL 313 (517)
Q Consensus 235 -pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l 313 (517)
++..++|+|. +++|||||+||++|+|+|++||||+|+|+||++|+ ...+.+|+|+||++++++ |
T Consensus 268 ~~~~~avv~~~-----------~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~---~~~~~~VtV~aG~t~~l~-i 332 (508)
T 1nkg_A 268 DSSMDWVVHWY-----------NDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEY---AVATSSVTVSAGSTTTKN-I 332 (508)
T ss_dssp CTTSCEEEEEE-----------CSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTE---EEEEEEEEECTTCEEECC-E
T ss_pred cCCceEEEEEc-----------CCCceeEEEECCCCcEEeCCcCCceEEEEEEECce---EEEEeEEEEcCCCeeEee-e
Confidence 4444566663 58999999999999999999999999999999987 356678999999999996 9
Q ss_pred EEcCCCCCCCeEEEeccCCCccccccCCCCccccccccccCCchhhcccchhcccccCCCCCeeEEeeccCCCCCeeeEE
Q 010135 314 VYEPPRDGPTLWEIGIPDRSAREFNVPDPDPKYVNRLFVNHPDRFRQYGLWSRYTELYPNEDLVYTIGVSDYSKDWFFAQ 393 (517)
Q Consensus 314 ~~~~~~~~~~LweIG~~Drt~~~F~~~d~~~~~~~~~~~~hp~~~R~~glW~~y~~~~P~~dl~ytVG~S~~~~Dw~y~~ 393 (517)
+|+++ ++++|||||+|||+|.||+++|+ +.+|||+|+||| +|+ ||+||||+|++ +||||||
T Consensus 333 ~~~~~-~g~~iW~IG~pDrta~eF~~~d~-------~~~~hp~~~r~~-~W~---------~l~ytVG~S~~-~Dw~ya~ 393 (508)
T 1nkg_A 333 SGSVK-TGTTIFKIGEWDGQPTGFRNAAN-------QLRMHPSDSRMS-SWG---------PLTYTVGSSAL-TDFPMAV 393 (508)
T ss_dssp ECCCC-CCSEEEEEECSSSSCTTSBTHHH-------HTTSCTTCTTSC-CCC---------SCEEETTTSCG-GGSBSEE
T ss_pred EEecC-CCCeeEEeeCCCCCchhhcCCCc-------ccccCcchhccc-ccC---------CeEEEeCcCch-hcCCeEE
Confidence 99876 79999999999999999999873 335799999999 994 79999999999 7999999
Q ss_pred EEEecCCcccCCccEEEEEEeCCCCCCCcEEEEEEEeccC-CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeE
Q 010135 394 VVREMDNKTYQGTTWQIKFKLDHVDRNSSYKLRVAIASAT-LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYL 472 (517)
Q Consensus 394 ~~~~~~~~~~~~~~w~I~F~L~~~~~~~~~tLriala~a~-~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~ 472 (517)
|+ .++ ++|+|+|+|+++| .+++||||+||+|. +++++|+|||+.. ++|.++.+++||||+||++||+|+
T Consensus 394 ~~--~~~-----~~w~I~F~l~~~~-~~~~tLri~la~a~a~~~~qV~VN~~~~--~~~~~~~~~~~~~i~R~~~~G~~~ 463 (508)
T 1nkg_A 394 FK--SVN-----NPVTIKFTATSAQ-TGAATLRIGTTLSFAGGRPQATINSYTG--SAPAAPTNLDSRGVTRGAYRGLGE 463 (508)
T ss_dssp ET--TTT-----CCEEEEEEECGGG-CSCEEEEEEEEEEETTCEEEEEETTEEC--CCCCCCCCCCSCCGGGTCCCSCCC
T ss_pred EC--CCC-----CcEEEEEEcCccc-CCceEEEEEehhhccCCCeEEEECCcCC--cCccccccCCCCeEEecceeeeeE
Confidence 94 355 8999999999987 78999999999985 8999999999754 577889999999999999999999
Q ss_pred EEEEEeeCCCeeeeecEEEEEeecCCC--CCc--eEEEEEEEEec
Q 010135 473 LYHVNIPGTRFIEGENTIFLKQPRCTS--PFQ--GIMYDYIRLEG 513 (517)
Q Consensus 473 ~~~~~ipa~~L~~G~NtI~l~~~~g~s--~~~--~vmyD~I~Le~ 513 (517)
+++|+||+++|++|+|+|+|+++++++ +|| +|||||||||.
T Consensus 464 ~~~~~ipa~~L~~G~NtI~lt~~~~s~~~~fls~~vmyD~I~L~~ 508 (508)
T 1nkg_A 464 VYDVSIPSGTIVAGTNTITINVISGSSGDTYLSPNFIFDCVELFQ 508 (508)
T ss_dssp EEEEEECTTSSCSEEEEEEEEEECSCCCSGGGSSEEEEEEEEEEC
T ss_pred EEEEEEcHHHeecCceEEEEEeccCCCCCccccccEEEEEEEecC
Confidence 999999999999999999999999986 588 99999999984
No 2
>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}
Probab=98.04 E-value=8.3e-06 Score=86.64 Aligned_cols=96 Identities=15% Similarity=0.197 Sum_probs=61.7
Q ss_pred CeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEECceeeeeeee
Q 010135 218 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSD 297 (517)
Q Consensus 218 RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~~G~~G~~~~~ 297 (517)
.+.|+|+|+..++ .|..+|.|.+.+ ....+.||.+|.|.+ .++||+|+|.+...|+. ...
T Consensus 320 ~~~i~G~V~D~~g---~pi~gA~V~v~~-------------~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~---~~~ 379 (439)
T 2nsm_A 320 HQGIKGMVLDQNY---NNLANAVISVSG-------------INHDVTSGDHGDYFR-LLLPGIYTVSATAPGYD---PET 379 (439)
T ss_dssp SCSEEEEEECTTS---CBCTTCEEEETT-------------EEEEEECCTTSEEEE-CCCSEEEEEEEECTTEE---CEE
T ss_pred ccceEEEEEcCCC---CCccceEEEEEc-------------ccceeEECCCCeEEE-ccCCeeEEEEEEecCce---eEE
Confidence 5889999986555 889999999953 245689999999998 59999999999998865 444
Q ss_pred eEEEE-eCCceeeecceEEcCCCCCCCeEEEeccCCCcccc
Q 010135 298 ALVTI-TSGSNIKMGDLVYEPPRDGPTLWEIGIPDRSAREF 337 (517)
Q Consensus 298 ~~VtV-~aG~t~~l~~l~~~~~~~~~~LweIG~~Drt~~~F 337 (517)
..|+| .+++++. ++++.+. ..+|-||.+.+.+..+.
T Consensus 380 ~~v~v~~~~~~~~--~~~L~~~--~~~L~eVvV~~~~~~~~ 416 (439)
T 2nsm_A 380 VTVTVGPAEPTLV--NFHLKRS--IPQVSPVRRAPSRRHGV 416 (439)
T ss_dssp EEEEECSSSCEEC--CEECEEC-------------------
T ss_pred EEEEEecCCcceE--eEEEccC--CCccccEEEecCCCCCc
Confidence 46888 5666543 6877544 68999999988665443
No 3
>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*
Probab=97.95 E-value=2.5e-05 Score=81.29 Aligned_cols=78 Identities=18% Similarity=0.217 Sum_probs=63.3
Q ss_pred CeEEEEEEEEe-cCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEECceeeeeee
Q 010135 218 RGCVSGRLLVQ-DSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRS 296 (517)
Q Consensus 218 RG~VsG~v~~~-d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~~G~~G~~~~ 296 (517)
.++|+|+|+.. ++ .|..+|.|.+.+ ....+.||.+|.|.+ +++||+|+|.+...|+. ..
T Consensus 300 ~~~i~G~V~D~~~g---~pi~~A~V~v~~-------------~~~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~---~~ 359 (380)
T 1h8l_A 300 HRGIWGFVLDATDG---RGILNATISVAD-------------INHPVTTYKDGDYWR-LLVQGTYKVTASARGYD---PV 359 (380)
T ss_dssp GCEEEEEEEETTTC---SBCTTCEEEETT-------------EEEEEECCTTSEEEE-CCCSEEEEEEEECTTBC---CE
T ss_pred cccceEEEEeCCCC---CccCceEEEEec-------------CcceeEECCCEEEEE-ecCCCcEEEEEEEcCcc---ce
Confidence 58999999875 44 788999999953 245789999999999 59999999999998875 44
Q ss_pred eeEEEEeCCceeeecceEEc
Q 010135 297 DALVTITSGSNIKMGDLVYE 316 (517)
Q Consensus 297 ~~~VtV~aG~t~~l~~l~~~ 316 (517)
+..|+|.+++++.+ ++.+.
T Consensus 360 ~~~v~v~~~~~~~~-~~~L~ 378 (380)
T 1h8l_A 360 TKTVEVDSKGGVQV-NFTLS 378 (380)
T ss_dssp EEEEEECSSCEEEC-CEEEC
T ss_pred EEEEEEcCCCeEEE-EEEec
Confidence 45799999987776 57664
No 4
>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}
Probab=97.88 E-value=1.9e-05 Score=83.86 Aligned_cols=90 Identities=16% Similarity=0.145 Sum_probs=61.8
Q ss_pred eEEEEEEEEecCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEECceeeeeeeee
Q 010135 219 GCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDA 298 (517)
Q Consensus 219 G~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~~G~~G~~~~~~ 298 (517)
..|+|+|+..+| .|..+|+|.+.+. ....+.||++|.|.+. ++||+|+|++...|+.. ...+
T Consensus 337 ~gv~G~V~D~~G---~pi~gA~V~v~g~------------~~~~~~Td~~G~y~~~-l~pG~Y~l~vs~~Gy~~--~~~~ 398 (435)
T 3mn8_A 337 IGIKGLVTDASG---FPIADANVYVAGL------------EEKPMRTSKRGEYWRL-LTPGLYSVHASAFGYQT--SAPQ 398 (435)
T ss_dssp SSEEEEEECSSS---CBCTTCEEEETTC------------TTSCEECCTTCEEEEC-CCSEEEEEEEEBTTBCC--CCCE
T ss_pred ceeEEEEECCCC---CccCceEEEEecc------------cccceEeCCCCeEEEe-cCCCcEEEEEEEccccc--ceEE
Confidence 459999987666 8899999999531 1345789999999885 99999999999988721 3445
Q ss_pred EEEEeCCc--eeeecceEEcCCCCCCCeEEEec
Q 010135 299 LVTITSGS--NIKMGDLVYEPPRDGPTLWEIGI 329 (517)
Q Consensus 299 ~VtV~aG~--t~~l~~l~~~~~~~~~~LweIG~ 329 (517)
.|+|.+++ .+.+ ++++++. ..+|-||.+
T Consensus 399 ~v~v~~~~~~~~~~-~~~L~~~--~~~L~~v~~ 428 (435)
T 3mn8_A 399 QVRVTNDNQEALRL-DFKLAPV--ETNFDGISS 428 (435)
T ss_dssp EEEECCCSSSCEEC-CEECCBC-----------
T ss_pred EEEEecCCcceeEE-EEEEeec--CCCCCeeEe
Confidence 69999887 3356 5777554 778888875
No 5
>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1
Probab=97.84 E-value=1.8e-05 Score=83.85 Aligned_cols=92 Identities=17% Similarity=0.110 Sum_probs=62.5
Q ss_pred CeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEECceeeeeeee
Q 010135 218 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSD 297 (517)
Q Consensus 218 RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~~G~~G~~~~~ 297 (517)
.+.|+|+|+..++ .|..+|.|.+.+.. .+ .-+.||.+|.|.+ .+.||+|+|.+...|+. ..+
T Consensus 295 ~~~I~G~V~D~~g---~pi~gA~V~v~g~~---------~~--~~~~Td~~G~y~~-~l~~G~Y~l~vs~~Gy~---~~~ 356 (426)
T 1uwy_A 295 HLGVKGQVFDQNG---NPLPNVIVEVQDRK---------HI--CPYRTNKYGEYYL-LLLPGSYIINVTVPGHD---PHI 356 (426)
T ss_dssp GCSEEEEEECTTS---CBCCSCEEEETTCC---------CS--SCCBCCTTCEEEE-CCCSEEEEEEEECSSSC---CEE
T ss_pred cceeEEEEECCCC---CccCceEEEEEecc---------cc--ceeEeCCCCEEEe-ccCCeeEEEEEEEcCcc---cEE
Confidence 5789999987555 88999999996431 11 1267999999999 59999999999998865 444
Q ss_pred eEEEEeCCc----eeeecceEEcCCCCCCCeEEEecc
Q 010135 298 ALVTITSGS----NIKMGDLVYEPPRDGPTLWEIGIP 330 (517)
Q Consensus 298 ~~VtV~aG~----t~~l~~l~~~~~~~~~~LweIG~~ 330 (517)
..|+|.+++ ++.+ ++++.+ +..+|-||.+.
T Consensus 357 ~~v~v~~~~~~~~~~~~-~~~L~~--~~~~l~evv~~ 390 (426)
T 1uwy_A 357 TKVIIPEKSQNFSALKK-DILLPF--QGQLDSIPVSN 390 (426)
T ss_dssp EEEEECSSCSSSSCEEC-CEECSS--CC---------
T ss_pred EEEEEeCCCccccceEE-EEEEec--CCccccceeec
Confidence 568898876 5555 577754 47788888774
No 6
>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1
Probab=97.06 E-value=0.0031 Score=58.69 Aligned_cols=105 Identities=20% Similarity=0.306 Sum_probs=66.7
Q ss_pred CCCCCCC--CCCCCCCeEEEEEEEEec-CCCccccCceEEEecCCCC-------------CCC---------cccccccc
Q 010135 205 NFPASED--FQKSEERGCVSGRLLVQD-SNDVISANGAYVGLAPPGD-------------VGS---------WQTECKDY 259 (517)
Q Consensus 205 ~f~~s~~--y~~~~~RG~VsG~v~~~d-~~~~~pa~~a~V~L~~~~~-------------~g~---------~~~~~~~y 259 (517)
.+|+..+ +....+.++|+|++.+.. +....+..+..|.|.+... .|- |.-+-..|
T Consensus 28 ~~Fd~~e~a~~~~~G~~tI~G~a~~~~~~G~~~~~~G~~V~L~P~T~Ys~er~~~yG~~~~g~~p~~~~~~~~dp~~~~y 107 (170)
T 1xpn_A 28 PDFPEHEYAATQQVGGGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATY 107 (170)
T ss_dssp CSSCCGGGGTCCCCCCCCEEEEECEECTTSCEECCTTEEEEEEECCTHHHHHHHHSSSEEGGGCCSSSCCCCCCTTHHHH
T ss_pred CCCCHHHHHHHhCCCCceEEEEEEEEcCCCCEEecCCCEEEEEeCCHHHHHHHHHhCccccccccccccccccCchhhcc
Confidence 3444433 333445689999988877 3355667777788764210 010 11122446
Q ss_pred ceEEEeCCCcceEeCcccCcceEEEEEE---C---c---eeeeeeeeeEEEEeCCceeee
Q 010135 260 QFWTTADEDGCFSIKNIRTGNYNLYAWV---P---G---FVGDYRSDALVTITSGSNIKM 310 (517)
Q Consensus 260 qywt~td~~G~Fti~nVrpGtY~L~a~~---~---G---~~G~~~~~~~VtV~aG~t~~l 310 (517)
.--|.+|++|+|+|.+|+||+|-|.+.+ . + ..|... .+.|+|..|++.++
T Consensus 108 ~r~t~~D~~G~F~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~l-~k~Vtv~~Ge~~~v 166 (170)
T 1xpn_A 108 VREATTDQNGRFDFDHIPNGTYYISSELTWSAQSDGKTITEGGTV-TKLVTVSGSQPQKV 166 (170)
T ss_dssp CEEEEECSSCEEEECSCCSEEEEEEEEEEEEEEETTEEEEEEEEE-EEEEEECCSSCEEE
T ss_pred eeEEEecCCCcEEecCCCCccEEEEEEEeccCccccccccccceE-EEEEEeCCCcEEEE
Confidence 6678999999999999999999999842 1 1 112222 34699998888765
No 7
>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}
Probab=96.86 E-value=0.0066 Score=55.49 Aligned_cols=95 Identities=22% Similarity=0.385 Sum_probs=63.7
Q ss_pred CCCCeEEEEEEEEecCC-CccccCceEEEecCCC-------------CCCC---------ccccccccceEEEeCCCcce
Q 010135 215 SEERGCVSGRLLVQDSN-DVISANGAYVGLAPPG-------------DVGS---------WQTECKDYQFWTTADEDGCF 271 (517)
Q Consensus 215 ~~~RG~VsG~v~~~d~~-~~~pa~~a~V~L~~~~-------------~~g~---------~~~~~~~yqywt~td~~G~F 271 (517)
..+.++|.|++.+.... ......+..|.|.+.. +... -+-+-..|..-|.+|++|+|
T Consensus 20 ~~G~~tI~G~a~~r~~~G~~~~c~g~~V~L~P~T~Y~~e~~~~~g~~~~~~r~~~~~~~~~d~~~~~y~r~t~cD~~G~F 99 (150)
T 3qec_A 20 QVGEGVINGDLYLTSASGAIQKGTNTKVALEPATSYMKAYYAKFGNLDAAKRDPDVQPPVLDPRRATYVREATTDQNGRF 99 (150)
T ss_dssp CCCCEEEEEEEEEECTTSCEEECCSCEEEEEECCHHHHHHHHHHTTCBSTTCCTTCCCCCCCTTSGGGCEEEECCTTSEE
T ss_pred CCCcceEEEEEEEECCCCCEecCCCCEEEEEeCCHHHHHHHHHhcCcccccccCCCCCCCCChhHhcceeEEEeCCCCcE
Confidence 45789999999888632 3345677777775411 0000 11234567778999999999
Q ss_pred EeCcccCcceEEEEEEC------c---eeeeeeeeeEEEEeCCceeee
Q 010135 272 SIKNIRTGNYNLYAWVP------G---FVGDYRSDALVTITSGSNIKM 310 (517)
Q Consensus 272 ti~nVrpGtY~L~a~~~------G---~~G~~~~~~~VtV~aG~t~~l 310 (517)
+|.+|+||+|-|.+.+. + ..|..... .|+|+.|++.++
T Consensus 100 ~F~~Lp~G~Yyl~a~v~w~~~~~~~~~~qgg~lmk-~V~v~ggq~~~v 146 (150)
T 3qec_A 100 DFDHIPNGTYYISSELTWSAQSDGKTITEGGTVTK-LVTVSGSQPQKV 146 (150)
T ss_dssp EEEEECSEEEEEEEEEEEEEESSSSEEEEEEEEEE-EEEESSSCCCCE
T ss_pred EECCCCCccEEEEEEEEeccCCCCCcccccceEEE-EEEEcCCcEEEE
Confidence 99999999999988631 1 12333333 599999988654
No 8
>4aw7_A GH86A beta-porphyranase; hydrolase, porphyran-hexa-oligosaccharide, complex; HET: GLA GAL L6S AAL; 1.33A {Bacteroides plebeius}
Probab=96.57 E-value=0.0032 Score=68.74 Aligned_cols=72 Identities=14% Similarity=0.167 Sum_probs=52.6
Q ss_pred CCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecC
Q 010135 420 NSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRC 497 (517)
Q Consensus 420 ~~~~tLriala~a~--~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g 497 (517)
.+.++|||++.-.. ...+.|.|||..+. +|.-+. +.+.. -|+- +.-..+|+||+++|++++|+|.|+.+..
T Consensus 502 ~g~A~LRvg~gR~~g~s~~p~V~vNG~~v~--vP~~w~-g~dq~-~r~~---fFg~ieipVp~~lL~~~~NtI~VtFPD~ 574 (591)
T 4aw7_A 502 SGRASLRMSIGRPVSASKKPVVKINGTAVS--VPDNWK-GYGQS-NRNI---FFGMIEVPFDIQLLKNGDNNVDITFSDG 574 (591)
T ss_dssp SEEEEEEEEEEEETTSCSCCEEEETTEEEC--CCSCCS-SCCCT-TSSE---EEEEEEEEECGGGCCSEEEEEEEECSSC
T ss_pred CceEEEEEEcCcCCCcCCCCEEEECCEEec--cCcccc-ccccc-Chhh---ceEEEEecCCHHHHhcCCCeEEEEecCC
Confidence 37899999999875 45689999998775 222221 22221 2443 4568999999999998999999999875
Q ss_pred C
Q 010135 498 T 498 (517)
Q Consensus 498 ~ 498 (517)
.
T Consensus 575 G 575 (591)
T 4aw7_A 575 G 575 (591)
T ss_dssp C
T ss_pred C
Confidence 3
No 9
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=96.44 E-value=0.016 Score=51.73 Aligned_cols=90 Identities=11% Similarity=0.133 Sum_probs=55.5
Q ss_pred EEEEeCCCCCCCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 010135 410 IKFKLDHVDRNSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 487 (517)
Q Consensus 410 I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 487 (517)
|.|++.. +..|.|+|+|-.|... ...+.|.|||.... .....++... +. -.+...+++|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~g---~~~v~~p~Tg-----~W-~~w~t~~~~v~---L~aG~ 107 (139)
T 2w87_A 41 VVWAIDA-TSSGRRTLTIRYANGGTANRNGSLVINGGSNG---NYTVSLPTTG-----AW-TTWQTATIDVD---LVQGN 107 (139)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTTTTC---EEEECCCCCS-----ST-TCCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCceEEEEECCEEcc---eeEEEecCCC-----CC-CccEEEEEEEE---ECCCc
Confidence 4455432 3468999999998753 46799999997541 0011222111 10 02344455555 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEEecCC
Q 010135 488 NTIFLKQPRCTSPFQGIMYDYIRLEGPP 515 (517)
Q Consensus 488 NtI~l~~~~g~s~~~~vmyD~I~Le~p~ 515 (517)
|+|+|....+. . ++-.|+|+|+.+.
T Consensus 108 ntI~l~~~~~~-g--~~niD~i~v~~~~ 132 (139)
T 2w87_A 108 NIVQLSATTAE-G--LPNIDSLSVVGGT 132 (139)
T ss_dssp EEEEEEESSTT-C--CCEEEEEEEESSS
T ss_pred eEEEEEEcCCC-C--CEEEEEEEEecCC
Confidence 99999965321 1 4778999998654
No 10
>2wz8_A Cellulosome protein dockerin type I; sugar binding protein; 1.50A {Clostridium thermocellum}
Probab=96.38 E-value=0.014 Score=53.48 Aligned_cols=87 Identities=16% Similarity=0.208 Sum_probs=54.1
Q ss_pred EEEE-eCCCCCCCcEEEEEEEeccC------------CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEE
Q 010135 410 IKFK-LDHVDRNSSYKLRVAIASAT------------LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHV 476 (517)
Q Consensus 410 I~F~-L~~~~~~~~~tLriala~a~------------~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~ 476 (517)
|.|+ +.. +..|.|+|+|-.+... ...+.|.|||.... ...++.+.. .. .+....+
T Consensus 49 vtf~~V~~-~~aG~Y~l~irYang~~~~~~~y~~~~~~r~~~v~VNG~~~~-----~v~fp~Tg~-----W~-~~~~~tv 116 (156)
T 2wz8_A 49 LQFNNVYV-PQAGTYRMVVQFANAEVFGQHSYNNNVVDRYCSISVNGGPEK-----GHYFFNTRG-----WN-TYRTDII 116 (156)
T ss_dssp EEEEEEEE-SSCEEEEEEEEEECCCBC-------CBCCEEEEEEETTCCCE-----EEEECCCSS-----TT-CCEEEEE
T ss_pred EEEEEEec-CCCcEEEEEEEEECCCcccccccCCccCcceEEEEECCceee-----EEEeCCCCC-----CC-cceEEEE
Confidence 4444 432 3468999999988753 35799999997532 122222111 11 3455666
Q ss_pred EeeCCCeeeeecEEEEEeecCCCCCceEEEEEEEEec
Q 010135 477 NIPGTRFIEGENTIFLKQPRCTSPFQGIMYDYIRLEG 513 (517)
Q Consensus 477 ~ipa~~L~~G~NtI~l~~~~g~s~~~~vmyD~I~Le~ 513 (517)
.|+ |++|.|+|+|.-.. .+++ +.=.|+|.|..
T Consensus 117 ~V~---L~aG~NtI~~~~~~-~~~~-~pdiD~i~v~~ 148 (156)
T 2wz8_A 117 DVY---LNAGNNTIRFYNGT-SGSY-APNIDKIAIAA 148 (156)
T ss_dssp EEE---ECSEEEEEEEECCS-TTCB-CCEEEEEEEEC
T ss_pred EEE---ECCCceEEEEEecC-CCCC-CcEEEEEEEec
Confidence 776 99999999998541 1222 35678888753
No 11
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=96.02 E-value=0.02 Score=51.52 Aligned_cols=87 Identities=22% Similarity=0.282 Sum_probs=54.0
Q ss_pred EEEEeCCCCCCCcEEEEEEEecc--CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 010135 410 IKFKLDHVDRNSSYKLRVAIASA--TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 487 (517)
Q Consensus 410 I~F~L~~~~~~~~~tLriala~a--~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 487 (517)
|.|++.. +..|.|+|+|-.|.. ....+.|.|||.... ...++.+. +.. .+...++.|+ |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~ryang~~~~r~~~l~VNG~~~~-----~v~~p~Tg-----~W~-~w~t~~~~v~---L~aG~ 105 (145)
T 2w3j_A 41 IVWSLSA-ASAKTYTAQIRFGNGGTSARRATVVVNDSQIK-----TLDFPTNS-----NWT-QWQTVNVDIP---LKAGT 105 (145)
T ss_dssp EEEEEEE-SSCEEEEEEEEEECCSSSCCCEEEEETTEEEE-----EECCCCCS-----CTT-SCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCeEEEEEEEEECCCCCCeEEEEEECCeEee-----EEEecCCC-----CCC-eeEEEEEEEE---ECCCc
Confidence 4455432 346899999999854 356799999997432 11222111 110 1334445554 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEEecC
Q 010135 488 NTIFLKQPRCTSPFQGIMYDYIRLEGP 514 (517)
Q Consensus 488 NtI~l~~~~g~s~~~~vmyD~I~Le~p 514 (517)
|+|+|....+. -++-.|+|+|+..
T Consensus 106 ntI~l~~~~~~---g~~niD~i~v~~~ 129 (145)
T 2w3j_A 106 NSIKLVAETAD---GLANIDSIRVTGN 129 (145)
T ss_dssp EEEEEEECSTT---CCCEEEEEEECST
T ss_pred eEEEEEEecCc---CCEEEEEEEEEcC
Confidence 99999964321 1477899999754
No 12
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=95.75 E-value=0.027 Score=50.30 Aligned_cols=89 Identities=17% Similarity=0.176 Sum_probs=53.3
Q ss_pred EEEEeCCCCCCCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 010135 410 IKFKLDHVDRNSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 487 (517)
Q Consensus 410 I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 487 (517)
|.|++.. +..|.|+|+|-.+... ...+.|.|||.... ....++.... .. .+....+.|+ |++|.
T Consensus 42 v~~~V~v-~~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~~----~~v~~p~Tg~-----w~-~w~~~~~~v~---L~aG~ 107 (144)
T 2w47_A 42 IEWNVNA-PSSGSYALIFRYANGTTANRPMRITVNGNIVK----PSMDFVSTGA-----WT-TWNEAGIVAN---LNQGN 107 (144)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEE----EEECCCCCSS-----TT-CCEEEEEEEE---ECSEE
T ss_pred EEEEEEC-CCCcEEEEEEEEECCCCCCeEEEEEECCeEee----eEEEecCCCC-----CC-eeEEEEEEEE---ECCCc
Confidence 4455432 3468899999988753 56789999997421 0111211110 00 1222334444 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEEecCC
Q 010135 488 NTIFLKQPRCTSPFQGIMYDYIRLEGPP 515 (517)
Q Consensus 488 NtI~l~~~~g~s~~~~vmyD~I~Le~p~ 515 (517)
|+|+|....+ . -++-.|+|+|+...
T Consensus 108 ntI~l~~~~~-~--g~~niD~i~v~~~~ 132 (144)
T 2w47_A 108 NVIRATAIAS-D--GGPNVDYLKVFSAN 132 (144)
T ss_dssp EEEEEEECST-T--CCCEEEEEEEEECT
T ss_pred cEEEEEEeCC-C--CCEEEeEEEEEeCC
Confidence 9999986422 1 15889999998543
No 13
>2vzp_A Aocbm35, EXO-beta-D-glucosaminidase; family 35, CSXA, glucuronic acid, hydrolase; 1.05A {Amycolatopsis orientalis} PDB: 2vzq_A* 2vzr_A*
Probab=94.54 E-value=0.099 Score=45.41 Aligned_cols=85 Identities=19% Similarity=0.202 Sum_probs=50.3
Q ss_pred EEEEeCCCCCCCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 010135 410 IKFKLDHVDRNSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 487 (517)
Q Consensus 410 I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 487 (517)
|.|++.. +..|.|+|+|-.+... ...+.|.|||.... ....++... +.. .+....+.|. |++|.
T Consensus 41 v~~~V~v-~~aG~Y~l~~rya~~~~~~~~~~l~VnG~~~~----~~v~~p~tg-----~W~-~w~~~~~~v~---L~aG~ 106 (127)
T 2vzp_A 41 VEWTVTV-PSAGTYDVVVRYANGTTTSRPLDFSVNGSISA----SGVAFGSTG-----TWP-AWTTKTVRVT---LAAGV 106 (127)
T ss_dssp EEEEEEE-SSSEEEEEEEEEECCSSSCCCEEEEETTEEEE----EEECCCCCS-----STT-CCEEEEEEEE---ECSEE
T ss_pred EEEEEEc-CCCCEEEEEEEEEcCCCCCeEEEEEECCEEee----eEEEecCCC-----CCC-ceEEEEEEEE---ECCCc
Confidence 4455432 3468999999998753 57899999997431 001121110 110 1333344444 89999
Q ss_pred cEEEEEeecCCCCCceEEEEEEEE
Q 010135 488 NTIFLKQPRCTSPFQGIMYDYIRL 511 (517)
Q Consensus 488 NtI~l~~~~g~s~~~~vmyD~I~L 511 (517)
|+|+|....+. . ++-.|+|.+
T Consensus 107 ntI~l~~~~~~--~-~~niD~i~v 127 (127)
T 2vzp_A 107 NKIKAVATTAN--G-GPNVDKITL 127 (127)
T ss_dssp EEEEEEECSTT--C-CCEEEEEEC
T ss_pred eEEEEEEeCCC--C-CeEEEEEEC
Confidence 99999975322 1 467788764
No 14
>2bgo_A Endo-B1,4-mannanase 5C; carbohydrate binding protein, carbohydrate binding module; NMR {Cellvibrio japonicus} PDB: 2bgp_A
Probab=94.48 E-value=0.17 Score=45.63 Aligned_cols=89 Identities=9% Similarity=0.094 Sum_probs=56.3
Q ss_pred ccEEEEEEeCCCCCCCcEEEEEEEeccC-CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCee
Q 010135 406 TTWQIKFKLDHVDRNSSYKLRVAIASAT-LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFI 484 (517)
Q Consensus 406 ~~w~I~F~L~~~~~~~~~tLriala~a~-~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 484 (517)
..=.|.|+.+. +..|.|.|.|..+... ..+-.+.|||. .. . -.++.... .+.+. .+ =.|.
T Consensus 34 ~gdsVtf~VdV-P~tG~YdLsI~Ya~~~G~k~n~L~VNG~-~~-~----V~fP~tt~---------~~~~~-~~--V~L~ 94 (140)
T 2bgo_A 34 AGSAVIWNVDV-PVTGEYRINLTWSSPYSSKVNTLVMDGT-AL-S----YAFAEATV---------PVTYV-QT--KTLS 94 (140)
T ss_dssp TTCEEEEEECC-CSSEEEEEEEEECCCSSEEEEEEEETTE-EE-E----EEEESCCS---------CEEEE-EE--EEEC
T ss_pred CCCEEEEEEec-CCCcEEEEEEEeccCCCCceEEEEECCc-ee-E----EEECCcCC---------cEEEE-EE--EEec
Confidence 34456666643 4578999999997643 45678999996 42 1 12221110 11111 11 5788
Q ss_pred eeecEEEEEeecCCCCCceEEEEEEEEecCC
Q 010135 485 EGENTIFLKQPRCTSPFQGIMYDYIRLEGPP 515 (517)
Q Consensus 485 ~G~NtI~l~~~~g~s~~~~vmyD~I~Le~p~ 515 (517)
+|.|+|.|.-.+| .|-++..|+|+|+...
T Consensus 95 aG~NtI~i~~~~g--~WG~~~iD~I~l~~a~ 123 (140)
T 2bgo_A 95 AGNHSFGVRVGSS--DWGYMNVHSLKLELLG 123 (140)
T ss_dssp SSCEEEEEECCSS--SCCCCEEEEEEEEECC
T ss_pred CCccEEEEEecCC--CceeEEEEEEEEEcCC
Confidence 9999999986433 3556889999999654
No 15
>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B
Probab=94.01 E-value=0.092 Score=53.29 Aligned_cols=62 Identities=21% Similarity=0.341 Sum_probs=47.9
Q ss_pred CCeEEEEEEEEe----cCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcc--eEEEEEECce
Q 010135 217 ERGCVSGRLLVQ----DSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGN--YNLYAWVPGF 290 (517)
Q Consensus 217 ~RG~VsG~v~~~----d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGt--Y~L~a~~~G~ 290 (517)
.-++|+|-|... +........++.|-+..+ ...+.+|++|+|+|.+|++|+ |+|.+.++|+
T Consensus 156 ~~~~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt-------------~~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g~ 222 (321)
T 3kcp_A 156 EGYKVSGYILPDFSFDATVAPLVKAGFKVEIVGT-------------ELYAVTDANGYFEITGVPANASGYTLKISRATY 222 (321)
T ss_dssp SSEEEEEEEEESSCCCTTTHHHHHSCCEEEETTS-------------SCEEECCTTSEEEEEEECCEEEEEEEEEECTEE
T ss_pred CCceEEEEEccccccccccchhccCCcEEEEEec-------------cceeEECCCceEEEeccCCCCccEEEEEeecCc
Confidence 579999998862 111224456788888544 357889999999999999999 9999999886
Q ss_pred e
Q 010135 291 V 291 (517)
Q Consensus 291 ~ 291 (517)
.
T Consensus 223 l 223 (321)
T 3kcp_A 223 L 223 (321)
T ss_dssp C
T ss_pred e
Confidence 5
No 16
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=92.09 E-value=0.32 Score=49.36 Aligned_cols=63 Identities=14% Similarity=0.195 Sum_probs=46.5
Q ss_pred CCeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccc---cccce--EEEeCCCcceEeCcccCcceE
Q 010135 217 ERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC---KDYQF--WTTADEDGCFSIKNIRTGNYN 282 (517)
Q Consensus 217 ~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~---~~yqy--wt~td~~G~Fti~nVrpGtY~ 282 (517)
++-.|+|+|...+| .|..+|.|-+......|....+. .+... ...||++|.|.|.-|+||.|.
T Consensus 135 ~~l~v~G~V~D~~G---~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ 202 (312)
T 2xsu_A 135 DTLIIEGTVTDTEG---NIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYG 202 (312)
T ss_dssp CEEEEEEEEEETTS---CBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred eeEEEEEEEECCCC---CCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCccc
Confidence 47899999998777 89999999986555445332211 11111 367899999999999999997
No 17
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=91.27 E-value=0.43 Score=46.69 Aligned_cols=65 Identities=23% Similarity=0.336 Sum_probs=48.9
Q ss_pred CCCeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccc------cccce----EEEeCCCcceEeCcccCcceEE
Q 010135 216 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC------KDYQF----WTTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 216 ~~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~------~~yqy----wt~td~~G~Fti~nVrpGtY~L 283 (517)
.++=.|.|+|...+| +|..+|.|=+......|....+. .+..| ...||++|.|+|.-|+||-|..
T Consensus 76 G~~i~v~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 150 (241)
T 2bum_B 76 GERVIVHGYVRDQFG---RPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW 150 (241)
T ss_dssp SCEEEEEEEEEETTS---CBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred CcEEEEEEEEECCCC---CCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCcccc
Confidence 467899999998776 89999999987666666443221 12233 2568999999999999999975
No 18
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=90.97 E-value=0.27 Score=48.55 Aligned_cols=66 Identities=18% Similarity=0.313 Sum_probs=47.7
Q ss_pred CCCCeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccc---cccc-e-EEEeCCCcceEeCcccCcceEE
Q 010135 215 SEERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC---KDYQ-F-WTTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 215 ~~~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~---~~yq-y-wt~td~~G~Fti~nVrpGtY~L 283 (517)
..++-.|.|+|...+| .|..+|.|=+......|....+. .+.. . ...||++|.|+|.-|+||.|.+
T Consensus 99 ~G~~l~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~ 169 (254)
T 2boy_A 99 SGDTLIFRGEVVDQEG---APLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI 169 (254)
T ss_dssp CSCEEEEEEEEECTTS---CBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCCEEEEEEEEECCCC---CCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccC
Confidence 3568899999998776 89999999986555445332211 1111 2 2678999999999999999964
No 19
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=90.74 E-value=0.57 Score=47.52 Aligned_cols=65 Identities=15% Similarity=0.268 Sum_probs=48.1
Q ss_pred CCCeEEEEEEEEecCCCccccCceEEEecCCCCCCCcccc---ccccce--EEEeCCCcceEeCcccCcceEE
Q 010135 216 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTE---CKDYQF--WTTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 216 ~~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~---~~~yqy--wt~td~~G~Fti~nVrpGtY~L 283 (517)
.++=.|.|+|...+| .|..+|.|=+......|....+ ..+... ...||++|.|+|.-|+||-|.+
T Consensus 130 G~~l~v~G~V~D~~G---~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~~ 199 (311)
T 2azq_A 130 GVVMFLQGQVFDANG---KPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGC 199 (311)
T ss_dssp CCEEEEEEEEECSSS---CBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEEC
T ss_pred CcEEEEEEEEEcCCC---CCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcCC
Confidence 567899999998777 8999999998666555533321 111222 3668999999999999999973
No 20
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=90.21 E-value=1.2 Score=38.86 Aligned_cols=77 Identities=19% Similarity=0.258 Sum_probs=50.0
Q ss_pred CCcEEEEEEEeccC-CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCC
Q 010135 420 NSSYKLRVAIASAT-LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCT 498 (517)
Q Consensus 420 ~~~~tLriala~a~-~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 498 (517)
.|.++|.+-.|+.. +++++|++++ .. ++..+-.++... +. -.|...+.+|. |.+|.|+|+|....|
T Consensus 52 ~G~y~~~~rvas~~~gg~i~v~~~~-~g--~~~g~~~vp~Tg-----gw-~~w~t~~~~v~---l~~G~h~l~l~~~~g- 118 (131)
T 1uxz_A 52 SGSYLIEYRVASQNGGGSLTFEEAG-GA--PVHGTIAIPATG-----GW-QTWTTIQHTVN---LSAGSHQFGIKANAG- 118 (131)
T ss_dssp SEEEEEEEEEEESSCCEEEEEEETT-SC--SEEEEEEECCCS-----EE-EEEEEEEEEEE---ECSEEECEEEEEEEC-
T ss_pred CCceEEEEEEECCCCCcEEEEEECC-CC--CEeeEEEeCCCC-----CC-cccEEEEEEEE---eCCCeEEEEEEEcCC-
Confidence 57888888888754 6899999986 11 222233333221 11 13455555553 679999999998765
Q ss_pred CCCceEEEEEEEEec
Q 010135 499 SPFQGIMYDYIRLEG 513 (517)
Q Consensus 499 s~~~~vmyD~I~Le~ 513 (517)
++-.|.|+|+.
T Consensus 119 ----~~nld~~~f~~ 129 (131)
T 1uxz_A 119 ----GWNLNWIRINK 129 (131)
T ss_dssp ----CCEEEEEEEEE
T ss_pred ----CEEEEEEEEEE
Confidence 47889998863
No 21
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=89.78 E-value=0.46 Score=45.51 Aligned_cols=64 Identities=17% Similarity=0.274 Sum_probs=47.4
Q ss_pred CCCeEEEEEEEEecCCCccccCceEEEecCCCCCCCcccccc------ccce----EEEe-CCCcceEeCcccCcceE
Q 010135 216 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECK------DYQF----WTTA-DEDGCFSIKNIRTGNYN 282 (517)
Q Consensus 216 ~~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~------~yqy----wt~t-d~~G~Fti~nVrpGtY~ 282 (517)
.++=.|.|+|...+| +|..+|.|=+......|....+.. ...| ...| |++|.|+|.-|+||-|.
T Consensus 50 G~~l~v~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~yp 124 (209)
T 2bum_A 50 GQRIRLEGQVFDGLG---LPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVP 124 (209)
T ss_dssp SCEEEEEECEECTTS---CBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCB
T ss_pred CCEEEEEEEEECCCC---CCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCccc
Confidence 457899999997666 899999999876666564332211 2233 2566 99999999999999985
No 22
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=89.55 E-value=0.64 Score=45.41 Aligned_cols=67 Identities=24% Similarity=0.319 Sum_probs=49.3
Q ss_pred CCCCCeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccc------cccce--E--EEeCCCcceEeCcccCcceEE
Q 010135 214 KSEERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC------KDYQF--W--TTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 214 ~~~~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~------~~yqy--w--t~td~~G~Fti~nVrpGtY~L 283 (517)
+..++=.|.|+|...+| +|..+|.|=+......|....+. .+..| + ..||++|.|+|.-|+||-|..
T Consensus 73 ~~G~~i~l~G~V~D~~G---~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 149 (238)
T 3t63_M 73 PIGERIIVAGRVVDQYG---KPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPW 149 (238)
T ss_dssp CSSCEEEEEEEEEETTS---CBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred CCCcEEEEEEEEECCCC---CCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccC
Confidence 44578899999998776 89999999886655555433211 11223 3 578999999999999999975
No 23
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=89.40 E-value=0.36 Score=47.79 Aligned_cols=64 Identities=11% Similarity=0.090 Sum_probs=46.6
Q ss_pred CCeEEEEEEEEecCCCccccCceEEEecCCCCCCCcccc---cccc-ce-EEEeCCCcceEeCcccCcceEE
Q 010135 217 ERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTE---CKDY-QF-WTTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 217 ~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~---~~~y-qy-wt~td~~G~Fti~nVrpGtY~L 283 (517)
++=.|+|+|...+| +|..+|.|=+-....+|....+ .... -. ...||++|.|.|.-|+||-|-+
T Consensus 98 ~pl~v~G~V~D~~G---~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypi 166 (260)
T 3th1_A 98 KPLIIRGTVRSDTG---ELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQI 166 (260)
T ss_dssp CEEEEEEEEEETTS---CBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CEEEEEEEEECCCC---CCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCC
Confidence 56789999998777 8999999988665555533221 1111 22 3668999999999999999954
No 24
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=87.58 E-value=0.9 Score=45.68 Aligned_cols=65 Identities=17% Similarity=0.196 Sum_probs=48.5
Q ss_pred CCCeEEEEEEEEecCCCccccCceEEEecCCCCCCCcccccc--ccceE--EEeCCCcceEeCcccCcceEE
Q 010135 216 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECK--DYQFW--TTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 216 ~~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~--~yqyw--t~td~~G~Fti~nVrpGtY~L 283 (517)
.++=.|.|+|...+| +|..+|.|=+......|....+.. +...+ ..||++|.|+|.-|+||-|.+
T Consensus 131 G~~l~v~G~V~D~~G---~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp~ 199 (293)
T 1tmx_A 131 GEPCWVEGTVTDTDG---NPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYPI 199 (293)
T ss_dssp SCEEEEEEEEEETTS---CBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCC---CCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCcccC
Confidence 467899999998777 899999999966655554332211 23333 567999999999999999964
No 25
>2y8k_A Arabinoxylanase, carbohydrate binding family 6; hydrolase; 1.47A {Clostridium thermocellum}
Probab=87.55 E-value=2.4 Score=45.07 Aligned_cols=87 Identities=11% Similarity=0.182 Sum_probs=55.4
Q ss_pred EEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecE
Q 010135 410 IKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENT 489 (517)
Q Consensus 410 I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~Nt 489 (517)
|.|++.. ...|.++|.+-.|+..++.++|+||+.... .+-.++.+- +. ..|...+.+|. |.+|.|+
T Consensus 398 ~~y~v~~-~~~G~y~~~~rvas~~gg~i~v~~d~~~~~----g~~~vp~Tg-----gw-~~w~t~~~~v~---l~~G~~~ 463 (491)
T 2y8k_A 398 LEYTIRV-RNPGYYNLSLRVAGISGSRVQVSFGNQDKT----GVWELPATG-----GF-QTWTTATRQVF---LGAGLQK 463 (491)
T ss_dssp EEEEEEE-SSCEEEEEEEEEEECTTCEEEEEETTEESS----CSEECCCCS-----EE-EEEEEEEEEEE---ECSEEEE
T ss_pred EEEEEec-CCCccEEEEEEEEcCCCceEEEEECCccce----eEEEeCCCC-----CC-cccEEEEEEEE---eCCcEEE
Confidence 3455432 235788888888876688999999996421 111122111 11 13455555554 7899999
Q ss_pred EEEEeecCCCCCceEEEEEEEEecCC
Q 010135 490 IFLKQPRCTSPFQGIMYDYIRLEGPP 515 (517)
Q Consensus 490 I~l~~~~g~s~~~~vmyD~I~Le~p~ 515 (517)
|+|+...| ++-.|.|+|+..+
T Consensus 464 l~l~~~~g-----~~nld~~~f~~~~ 484 (491)
T 2y8k_A 464 LRINALSG-----GFNLNWIELSPIL 484 (491)
T ss_dssp EEEEESSS-----SEEEEEEEEEEC-
T ss_pred EEEEEecC-----CEEEEEEEEecCC
Confidence 99998766 4889999988643
No 26
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=87.09 E-value=0.71 Score=46.37 Aligned_cols=66 Identities=23% Similarity=0.312 Sum_probs=49.1
Q ss_pred CCCCeEEEEEEEEecCCCccccCceEEEecCCCCCCCcccc---ccccceE--EEeCCCcceEeCcccCcceEE
Q 010135 215 SEERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTE---CKDYQFW--TTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 215 ~~~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~---~~~yqyw--t~td~~G~Fti~nVrpGtY~L 283 (517)
..++-.|.|+|...+| .|..+|.|=+......|....+ ..+...+ ..||++|.|+|.-|+||-|.+
T Consensus 126 ~G~~l~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~ 196 (290)
T 3n9t_A 126 DGVPALVYGRVLDVQG---RPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI 196 (290)
T ss_dssp CSCEEEEEEEEEETTS---CBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred CCCeEEEEEEEECCCC---CCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCC
Confidence 3467899999998776 8999999988766655644321 1122233 578999999999999999975
No 27
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=86.62 E-value=0.72 Score=46.76 Aligned_cols=63 Identities=16% Similarity=0.257 Sum_probs=45.9
Q ss_pred CeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccc-----cccceE--EEeCCCcceEeCcccCcceEE
Q 010135 218 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC-----KDYQFW--TTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 218 RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~-----~~yqyw--t~td~~G~Fti~nVrpGtY~L 283 (517)
+=.|.|+|...+| .|..+|.|=+......|....+. .+...+ ..||++|.|+|.-|+||-|.+
T Consensus 133 ~l~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 202 (311)
T 1dmh_A 133 TLILHGTIFDADG---KPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGC 202 (311)
T ss_dssp EEEEEEEEECTTS---CBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred eEEEEEEEEcCCC---CCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccC
Confidence 6789999998776 89999999886555555333211 112222 568999999999999999964
No 28
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=86.34 E-value=0.9 Score=44.83 Aligned_cols=65 Identities=18% Similarity=0.300 Sum_probs=47.4
Q ss_pred CCCeEEEEEEEEecCCCccccCceEEEecCCCCCCCcccc----ccccceE--EEeCCCcceEeCcccCcceEE
Q 010135 216 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTE----CKDYQFW--TTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 216 ~~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~----~~~yqyw--t~td~~G~Fti~nVrpGtY~L 283 (517)
.++-.|+|+|...+| +|..+|.|=+-....+|....+ ..+...+ ..||++|.|+|.-|+||-|-+
T Consensus 101 G~~l~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~ 171 (257)
T 3o5u_A 101 GDRMRFTGSVRDTSG---TPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYEI 171 (257)
T ss_dssp SCEEEEEEEEECTTC---CBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCC---CCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcCC
Confidence 357899999997766 8999999988766655643321 1112233 568999999999999999953
No 29
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=86.25 E-value=0.74 Score=43.78 Aligned_cols=65 Identities=14% Similarity=0.270 Sum_probs=46.9
Q ss_pred CCCeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccc---cccceE--EEeCCC-cceEeCcccCcceEE
Q 010135 216 EERGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC---KDYQFW--TTADED-GCFSIKNIRTGNYNL 283 (517)
Q Consensus 216 ~~RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~---~~yqyw--t~td~~-G~Fti~nVrpGtY~L 283 (517)
.++=.|.|+|...+| +|..+|.|=+......|....+. .+...+ ..||++ |.|+|.-|+||-|..
T Consensus 46 G~~l~v~G~V~D~~G---~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~ 116 (200)
T 3t63_A 46 GEHILLLGQVYDGNG---HLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNN 116 (200)
T ss_dssp SCEEEEEECEECTTS---CBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEEC
T ss_pred CCEEEEEEEEECCCC---CCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCC
Confidence 457899999997766 89999999886555455333211 112233 568998 999999999999974
No 30
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=85.56 E-value=0.75 Score=45.94 Aligned_cols=63 Identities=24% Similarity=0.344 Sum_probs=46.1
Q ss_pred CeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccc---cccce--EEEeCCCcceEeCcccCcceEE
Q 010135 218 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTEC---KDYQF--WTTADEDGCFSIKNIRTGNYNL 283 (517)
Q Consensus 218 RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~---~~yqy--wt~td~~G~Fti~nVrpGtY~L 283 (517)
+=.|.|+|...+| .|..+|.|=+.....+|....+. .+... ...||++|.|+|.-|+||-|-+
T Consensus 131 pl~l~G~V~D~~G---~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp~ 198 (280)
T 3hhy_A 131 PLVFSGQVTDLDG---NGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQI 198 (280)
T ss_dssp EEEEEEEEECTTS---CBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred EEEEEEEEECCCC---CCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcCC
Confidence 4589999998776 89999999886665555333211 11222 3578999999999999999964
No 31
>2cdp_A Beta-agarase 1; carbohydrate-binding module, hydrolase; HET: GAL AAL; 1.59A {Saccharophagus degradans} PDB: 2cdo_A*
Probab=85.16 E-value=2 Score=38.88 Aligned_cols=82 Identities=12% Similarity=0.135 Sum_probs=47.2
Q ss_pred CCCcEEEEEEEeccC-CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecC
Q 010135 419 RNSSYKLRVAIASAT-LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRC 497 (517)
Q Consensus 419 ~~~~~tLriala~a~-~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g 497 (517)
..|.|+|.+-.|+.. ++.++|+|||.... +....-.++. .+. -.|...+. ..=.|.+|.|+|+|....+
T Consensus 77 ~aG~Y~i~~rvas~~~g~~i~l~vdg~~~~-~~~g~~~vp~------tGW-~~w~t~t~--~~v~L~aG~htL~l~~~g~ 146 (160)
T 2cdp_A 77 QAGNYTISYQAGSGVTGGSIEFLVNENGSW-ASKTVTAVPN------QGW-DNFQPLNG--GSVYLSAGTHQVRLHGAGS 146 (160)
T ss_dssp SCEEEEEEEEEEBSSSSCEEEEEEECSSSE-EEEEEEECCB------SCT-TCCEEEEE--EEEEECSEEEEEEEEECSS
T ss_pred CCcEEEEEEEEEcCCCCceEEEEECCCCCc-eeeeEEEcCC------CCC-ceeEEeee--eEEEeCCCeEEEEEEEECC
Confidence 468899988888764 67899999996210 0111111111 111 11222222 1234679999999996543
Q ss_pred CCCCceEEEEEEEEe
Q 010135 498 TSPFQGIMYDYIRLE 512 (517)
Q Consensus 498 ~s~~~~vmyD~I~Le 512 (517)
+.+ ++-.|.|+|.
T Consensus 147 -~~~-~~Nld~~~f~ 159 (160)
T 2cdp_A 147 -NNW-QWNLDKFTLS 159 (160)
T ss_dssp -SSB-CCEEEEEEEE
T ss_pred -CCC-cEEEEEEEEE
Confidence 233 3578888875
No 32
>1w9s_A BH0236 protein, BHCBM6; carbohydrate-binding module, lectin, beta-glucan, carbohydrate binding, glycoside hydrolase; 1.59A {Bacillus halodurans} SCOP: b.18.1.10 PDB: 1w9t_A* 1w9w_A*
Probab=82.69 E-value=11 Score=32.99 Aligned_cols=82 Identities=13% Similarity=0.200 Sum_probs=49.8
Q ss_pred CCcEEEEEEEeccC-CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCC
Q 010135 420 NSSYKLRVAIASAT-LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCT 498 (517)
Q Consensus 420 ~~~~tLriala~a~-~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 498 (517)
.+.++|.+-+|+.. ++.++|++++..- ++..+-.++... + --.|+..+.+|+ +.+|.+.|+|....+.
T Consensus 58 ~G~~~~~~rvas~~~gg~iev~~d~~~G--~~~gt~~v~~Tg-----g-w~~w~t~~~~v~---~~~G~h~l~l~f~g~~ 126 (142)
T 1w9s_A 58 RDASSIEVRVASDTPGGRIEIRTGSPTG--TLLGDVQVPNTG-----G-WQQWQTVTGNVQ---IQPGTYDVYLVFKGSP 126 (142)
T ss_dssp SCEEEEEEEEEESSSCEEEEEEESSTTS--CEEEEEEECCCS-----E-EEEEEEEEEEEE---ECSEEEEEEEEEESCT
T ss_pred CCcEEEEEEEEcCCCCeEEEEEECCCCC--eEEEEEEeCCCC-----C-CcccEEEEEEEc---cCCcEEEEEEEEECCC
Confidence 46777777777754 6899999997643 222233333221 1 114555666654 4689999999876432
Q ss_pred CCCceEEEEEEEEec
Q 010135 499 SPFQGIMYDYIRLEG 513 (517)
Q Consensus 499 s~~~~vmyD~I~Le~ 513 (517)
+.. -+-.|.++++.
T Consensus 127 ~~~-~~nld~~~f~~ 140 (142)
T 1w9s_A 127 EYD-LMNVNWFVFRA 140 (142)
T ss_dssp TSC-CCEEEEEEEEC
T ss_pred Ccc-eEEEEEEEEEe
Confidence 222 25678888774
No 33
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=81.25 E-value=1.7 Score=43.09 Aligned_cols=48 Identities=17% Similarity=0.257 Sum_probs=39.2
Q ss_pred EEeCCCcceEeCcccCcceEEEEEECceeeeeeeeeEEEEeCCceeeecceEE
Q 010135 263 TTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTITSGSNIKMGDLVY 315 (517)
Q Consensus 263 t~td~~G~Fti~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~aG~t~~l~~l~~ 315 (517)
+++|..|.|-+..+.+|.|+|.+.+.|+ ....++.| .|+.+.||+|.|
T Consensus 227 ~~~d~~G~f~~~~l~~G~y~v~v~a~g~----p~~~~~~~-~~~~~~lg~v~l 274 (274)
T 1ti6_B 227 AETNFFGEFKFDALDNGEYTVEIDADGK----SYSDTVVI-DDKSVDLGFIKL 274 (274)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEETTE----EEEEEEEE-SSSCEEEEEEEC
T ss_pred EeecCcCcEEEeccCCcceEEEEecCCC----CccceeEE-ccCccccceeeC
Confidence 5678999999999999999999999764 33356888 788888987753
No 34
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=79.87 E-value=3.2 Score=43.84 Aligned_cols=63 Identities=25% Similarity=0.295 Sum_probs=44.4
Q ss_pred CCeEEEEEEEEec---CC---CccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEEC
Q 010135 217 ERGCVSGRLLVQD---SN---DVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVP 288 (517)
Q Consensus 217 ~RG~VsG~v~~~d---~~---~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~~ 288 (517)
+-+.|.|.|=.-. |. ...|..++.|-|..+. ...---+.||++|.|.|.++.||+|++.+-.+
T Consensus 304 G~~~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~d~~---------G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 304 GFGGFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPT---------GIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp CEEEEEEEEEECTTSSSSSCCSSCBCTTCEEEEECTT---------SCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred ceEEEccEEEEeCCCCCCcCcCCCCcCCeEEEEEcCC---------CCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 4467788766422 11 2357788999997531 11234678999999999999999999987654
No 35
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=77.89 E-value=13 Score=30.34 Aligned_cols=57 Identities=19% Similarity=0.197 Sum_probs=36.5
Q ss_pred EEEEEEecCCCccccCceEEEecCCCCCCCccccccccceE----EEeCCCcceEeCcccCcceEEEEEECceee
Q 010135 222 SGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFW----TTADEDGCFSIKNIRTGNYNLYAWVPGFVG 292 (517)
Q Consensus 222 sG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqyw----t~td~~G~Fti~nVrpGtY~L~a~~~G~~G 292 (517)
.=+|...+| +|+.+|.|-+. +. |. +.|+ ..||++|.|++. +=-|+-.+.|..+|..|
T Consensus 4 ~v~V~d~~G---kPV~gA~Vefe-------~y--Ny-ae~~~~~~~~TD~~G~~s~~-~G~Gd~~v~A~k~G~~g 64 (82)
T 3e8v_A 4 SVLVTDAEG---QPVADATVEFK-------VY--NY-AEFYTVATKHTDRSGHASLT-AGKGDMLVWASKDGRFG 64 (82)
T ss_dssp EEEEECTTS---CBCTTCEEEEE-------EE--ET-TEEEEEEEEECCTTSEEEEE-CCSEEEEEEEEETTEEE
T ss_pred EEEEEcCCC---CCCCCCEEEEE-------EE--Ec-hheeEEEEEEECCCceEEEE-EcCCceEEEeccCCEEE
Confidence 334555556 88888887763 11 11 2233 357999999996 45577777777787655
No 36
>2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A
Probab=77.83 E-value=2.4 Score=37.53 Aligned_cols=63 Identities=13% Similarity=0.085 Sum_probs=41.9
Q ss_pred CCeEEEEEEEEec-CCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceE----eCcccCcceEEEEEE
Q 010135 217 ERGCVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFS----IKNIRTGNYNLYAWV 287 (517)
Q Consensus 217 ~RG~VsG~v~~~d-~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Ft----i~nVrpGtY~L~a~~ 287 (517)
.++.|+=.|+..- | +||.++.|-|......++|.. -.-+.||++|+.. -..+.+|.|+|..-.
T Consensus 8 ~~~~LStHVLDt~~G---~PAagv~V~L~~~~~~~~w~~-----l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~t 75 (127)
T 2h4e_A 8 SKXPLMVKVLDAVRG---SPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEIDT 75 (127)
T ss_dssp --CCEEEEEEETTTT---EECTTCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CcCCEEEEEecCCCc---CCCCCCEEEEEEeCCCCCeEE-----EEEeecCCCccccCcCCCCCccceEEEEEEEh
Confidence 3577877776443 5 999999999964211122432 3346789999872 345889999999853
No 37
>2v4v_A GH59 galactosidase; hydrolase, family 6 carbohydrate binding module, CCCBM6; HET: XYP; 1.50A {Clostridium cellulolyticum}
Probab=77.13 E-value=16 Score=31.37 Aligned_cols=79 Identities=11% Similarity=0.224 Sum_probs=46.3
Q ss_pred CcEEEEEEEecc-CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCCC
Q 010135 421 SSYKLRVAIASA-TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTS 499 (517)
Q Consensus 421 ~~~tLriala~a-~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s 499 (517)
+.+++.+-+|++ .++.++|++++... ++..+-.++... + -..|...+.+|+ +.+|...|+|....++
T Consensus 49 G~~~~~~rvas~~~gg~ievrlds~~G--~~~g~~~v~~Tg-----g-w~~~~t~~~~v~---~~~G~h~l~l~f~g~~- 116 (129)
T 2v4v_A 49 GVGGFQARVASATSGGNIEIRLDSSTG--TLIGTCPVAGTG-----D-WQTYTDAKCTVS---GVTGKHDVYLVFKGDS- 116 (129)
T ss_dssp CCCEEEEEEEESSCCEEEEEEESSTTS--CEEEEEEECCCS-----E-EEEEEEEEEECC---CCEEEEEEEEEEECSS-
T ss_pred CeEEEEEEEEcCCCCcEEEEEECCCCC--eEEEEEEecCCC-----C-CceeEEEEEEEc---cCCceEEEEEEEECCC-
Confidence 455555555554 46799999997643 232333333221 1 124555555553 5799999999876543
Q ss_pred CCceEEEEEEEEe
Q 010135 500 PFQGIMYDYIRLE 512 (517)
Q Consensus 500 ~~~~vmyD~I~Le 512 (517)
+.+ +-.|.++++
T Consensus 117 ~~~-~nld~~~f~ 128 (129)
T 2v4v_A 117 GYL-FNLNWFTFS 128 (129)
T ss_dssp SCC-CEEEEEEEE
T ss_pred Cce-EEEEEEEEE
Confidence 321 666777765
No 38
>1uxx_X Xylanase U; carbohydrate binding module, CBM6, xylopentaose binding, xylan degradation; HET: XYP; 1.6A {Clostridium thermocellum} SCOP: b.18.1.10 PDB: 1gmm_A*
Probab=76.42 E-value=22 Score=30.76 Aligned_cols=78 Identities=18% Similarity=0.304 Sum_probs=48.3
Q ss_pred CcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCC
Q 010135 421 SSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCT 498 (517)
Q Consensus 421 ~~~tLriala~a~--~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~ 498 (517)
+.+++.+-+|+.. ++.++|++++... ++..+-.++... +. -.|+..+.+|+ +.+|...|+|.. .|
T Consensus 51 G~~~~~~rvas~~~~gg~ievr~ds~~G--~~~gt~~v~~Tg-----gw-~~~~~~~~~v~---~~~G~h~l~l~f-~G- 117 (133)
T 1uxx_X 51 GANSFKARVASGADTPTNIQLRLGSPTG--TLIGTLTVASTG-----GW-NNYEEKSCSIT---NTTGQHDLYLVF-SG- 117 (133)
T ss_dssp CEEEEEEEEEECCSSCEEEEEEESSTTS--EEEEEEEECCCS-----EE-EEEEEEEEEEE---EECSEEEEEEEE-SS-
T ss_pred CcEEEEEEEEeCCCCCcEEEEEECCCCC--cEEEEEEeCCCC-----CC-ceEEEEEEEEc---cCCcEEEEEEEE-EC-
Confidence 6677766666653 5699999998643 222233333221 11 24555556664 468999999976 55
Q ss_pred CCCceEEEEEEEEecCC
Q 010135 499 SPFQGIMYDYIRLEGPP 515 (517)
Q Consensus 499 s~~~~vmyD~I~Le~p~ 515 (517)
.+-.|.++++.+.
T Consensus 118 ----~~nl~~~~f~~~g 130 (133)
T 1uxx_X 118 ----PVNIDYFIFDSNG 130 (133)
T ss_dssp ----CCEEEEEEEECC-
T ss_pred ----CcEEEEEEEEcCC
Confidence 3778888888653
No 39
>2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A
Probab=74.06 E-value=3.6 Score=35.69 Aligned_cols=62 Identities=23% Similarity=0.297 Sum_probs=40.7
Q ss_pred CCeEEEEEEEEec-CCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceE----eCcccCcceEEEEEE
Q 010135 217 ERGCVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFS----IKNIRTGNYNLYAWV 287 (517)
Q Consensus 217 ~RG~VsG~v~~~d-~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Ft----i~nVrpGtY~L~a~~ 287 (517)
+|+.|+=.|+..- | +||.++.|.|..... +.|+ .---+.||++|+.. -..+.+|.|+|..-.
T Consensus 2 ~~~~lstHVLDt~~G---~PAagv~V~L~~~~~-~~~~-----~l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~t 68 (114)
T 2g2n_A 2 QQNILSVHILNQQTG---KPAADVTVTLEKKAD-NGWL-----QLNTAKTDKDGRIKALWPEQTATTGDYRVVFKT 68 (114)
T ss_dssp --CCEEEEEEETTTT---EECCSCEEEEEEECS-SSEE-----EEEEEECCTTSEESCCSCSSCCCSEEEEEEECH
T ss_pred CCCCeEEEEecCCCc---CCCCCCEEEEEEeCC-CCcE-----EEEEEecCCCCccccccCCCCCCceEEEEEEEh
Confidence 5677887776443 5 999999999964211 1233 12345689999862 235788999999853
No 40
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=73.87 E-value=1.9 Score=50.00 Aligned_cols=71 Identities=18% Similarity=0.150 Sum_probs=43.4
Q ss_pred EEEEEEeCCCCCCCcEEEEEEEeccC--C--CeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCe
Q 010135 408 WQIKFKLDHVDRNSSYKLRVAIASAT--L--AELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRF 483 (517)
Q Consensus 408 w~I~F~L~~~~~~~~~tLriala~a~--~--~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L 483 (517)
.+=.|+|+... .....|.|-+..-. . .+-+|.|||+.++. . -+.+ +..-.|.||+++|
T Consensus 855 yr~~f~L~~p~-g~d~pl~L~lg~~~~~~~~~~~~~~VNG~~iGr-y--~~~~--------------~pqr~y~VP~giL 916 (971)
T 1tg7_A 855 YSTSFDLDLPS-GYDIPLYFNFGNSTSTPAAYRVQLYVNGYQYGK-Y--VNNI--------------GPQTSFPVPEGIL 916 (971)
T ss_dssp EEEEEECCCCT-TEECCEEEEECCCCSSCCCEEEEEEETTEEEEE-E--ETTT--------------CSCCEEEECBTTB
T ss_pred EEEEEeccCCC-CCCceEEEEcCCCCCCCccceEEEEECCEEEee-e--cCCC--------------CCCEEEECCHHHh
Confidence 35568876532 22223444332211 1 48999999997751 0 0011 1334689999999
Q ss_pred -eeeecEEEEEeec
Q 010135 484 -IEGENTIFLKQPR 496 (517)
Q Consensus 484 -~~G~NtI~l~~~~ 496 (517)
++|.|+|.|++..
T Consensus 917 n~~G~N~i~vrv~~ 930 (971)
T 1tg7_A 917 NYHGTNWLALSLWA 930 (971)
T ss_dssp CTTSEEEEEEEEEE
T ss_pred CcCCccEEEEEEec
Confidence 9999999997754
No 41
>1od3_A Putative xylanase; hydrolase, carbohydrate binding module, beta-sandwich, laminaribiose; HET: BGC; 1.0A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1nae_A* 1o8s_A* 1o8p_A
Probab=70.23 E-value=34 Score=31.04 Aligned_cols=76 Identities=18% Similarity=0.270 Sum_probs=49.3
Q ss_pred CcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCCCC
Q 010135 421 SSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTSP 500 (517)
Q Consensus 421 ~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s~ 500 (517)
+.++|.+-+|+..++.++|++++... ++..+-.++...+ --.|...+.+|+ +.+|...|+|.. .|
T Consensus 90 G~~~~~~rvas~~~G~ievrlds~~G--~~lgt~~vp~Tgg------w~~w~tvt~~v~---~~~G~hdLylvf-~G--- 154 (168)
T 1od3_A 90 GATSVTARVATQNATTIQVRLGSPSG--TLLGTIYVGSTGS------FDTYRDVSATIS---NTAGVKDIVLVF-SG--- 154 (168)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTS--CEEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEE-SS---
T ss_pred CcEEEEEEEEcCCCcEEEEEECCCCC--cEEEEEEeCCCCC------CcccEEEEEEEc---CCCcEEEEEEEE-EC---
Confidence 67777777777667899999997643 2322333332211 114666666665 468999999976 45
Q ss_pred CceEEEEEEEEec
Q 010135 501 FQGIMYDYIRLEG 513 (517)
Q Consensus 501 ~~~vmyD~I~Le~ 513 (517)
++-.|.++++.
T Consensus 155 --~~nldw~~F~~ 165 (168)
T 1od3_A 155 --PVNVDWFVFSK 165 (168)
T ss_dssp --CCEEEEEEEEC
T ss_pred --CcEEEEEEEEe
Confidence 37788888875
No 42
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=70.16 E-value=2 Score=47.93 Aligned_cols=74 Identities=16% Similarity=0.154 Sum_probs=51.7
Q ss_pred ccEEEEEEeCCCCCCCcEEEEEEEecc-----CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeC
Q 010135 406 TTWQIKFKLDHVDRNSSYKLRVAIASA-----TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPG 480 (517)
Q Consensus 406 ~~w~I~F~L~~~~~~~~~tLriala~a-----~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa 480 (517)
..-.+.|.++.+ ...++|+|..+.+ ..++++|.|||+.++. + .+..... ....+|+||+
T Consensus 61 ~~~~~~f~l~~v--Vt~A~L~L~Yt~SPsLlPe~S~LkV~LNge~VGt-l----pl~~~~~---------~~~~~i~Ipp 124 (707)
T 4hg6_B 61 ARAAFRLFLPTE--AVGGTLTLAQRSSIDILPESSQIIVRMNDQEIGR-F----TPRQFGA---------LGAVTMPLGE 124 (707)
T ss_dssp SEEEEEEECSSC--CTTCCBBCEEECSSCCCBTTBEEEEEETTEEEEE-E----CCCCCSS---------CCCBCCCCCS
T ss_pred CceeEEEEccch--heeEEEEEEEeeCccccCccceEEEEECCEEEEE-E----ecCCCCC---------ceeEEEecCh
Confidence 456777888773 4567777777765 3589999999986641 1 1211111 2445999998
Q ss_pred CCeeeeecEEEEEeec
Q 010135 481 TRFIEGENTIFLKQPR 496 (517)
Q Consensus 481 ~~L~~G~NtI~l~~~~ 496 (517)
.|..|.|.|.|....
T Consensus 125 -~l~~gfN~L~fe~ig 139 (707)
T 4hg6_B 125 -AVRAGDNLVTIEAQH 139 (707)
T ss_dssp -SSCSSEEEEEEEEEC
T ss_pred -HHcCCcceEEEEEcC
Confidence 899999999999754
No 43
>1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A*
Probab=68.74 E-value=4.5 Score=35.30 Aligned_cols=59 Identities=14% Similarity=0.163 Sum_probs=38.2
Q ss_pred EEEEEEEec-CCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcce----EeCcccCcceEEEEEE
Q 010135 221 VSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCF----SIKNIRTGNYNLYAWV 287 (517)
Q Consensus 221 VsG~v~~~d-~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~F----ti~nVrpGtY~L~a~~ 287 (517)
|+=.|+..- | +||.++.|-|......++|+. -.-+.||++|+. .-..+.+|.|+|..-.
T Consensus 4 lstHVLDt~~G---~PAagv~V~L~~~~~~~~~~~-----l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~t 67 (119)
T 1oo2_A 4 LMVKILDAVKG---TPAGSVALKVSQKTADGGWTQ-----IATGVTDATGEIHNLITEQQFPAGVYRVEFDT 67 (119)
T ss_dssp EEEEEEETTTT---EECTTCEEEEEEECTTSCEEE-----EEEEECCTTSCCTTCSCGGGCCSEEEEEEECH
T ss_pred eeEEEecCCCc---CCCCCCEEEEEEeCCCCCcEE-----EEEEecCCCCcccCcCCCCCCCceEEEEEEEh
Confidence 444544322 5 999999999964211123432 334678999986 2335789999999853
No 44
>1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ...
Probab=68.67 E-value=3.3 Score=35.93 Aligned_cols=49 Identities=14% Similarity=0.127 Sum_probs=34.0
Q ss_pred cccCceEEEecCCCCCCCccccccccceEEEeCCCcce----EeCcccCcceEEEEEE
Q 010135 234 ISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCF----SIKNIRTGNYNLYAWV 287 (517)
Q Consensus 234 ~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~F----ti~nVrpGtY~L~a~~ 287 (517)
+||.++.|.|......++|.. -.-+.||++|+. .-..+.+|.|+|..-.
T Consensus 14 ~PAagv~V~L~~~~~~~~~~~-----l~~~~Tn~DGR~~~l~~~~~~~~G~Y~l~F~t 66 (115)
T 1f86_A 14 SPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEIDT 66 (115)
T ss_dssp EECTTCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CcCCCCEEEEEEcCCCCCcEE-----EEEeecCCCccccCcCCCCCCcceEEEEEEEh
Confidence 999999999964221122432 334678999986 2345789999999853
No 45
>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}
Probab=68.54 E-value=7.9 Score=33.62 Aligned_cols=58 Identities=19% Similarity=0.206 Sum_probs=40.7
Q ss_pred CCeEEEEEEEEec-CCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEe---CcccCcceEEEEEE
Q 010135 217 ERGCVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSI---KNIRTGNYNLYAWV 287 (517)
Q Consensus 217 ~RG~VsG~v~~~d-~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti---~nVrpGtY~L~a~~ 287 (517)
+-+.|+=.|+... | +||.++.|-|... + ..-.-+.||+||+... ..+.+|+|+|..-.
T Consensus 8 ~M~~lstHVLDt~~G---~PAagv~V~L~~~--------~--~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~t 69 (116)
T 3qva_A 8 HMSTLSTHILDISTG---TPAEGVTVSLSRE--------G--ETLANLVTNAQGRIATFSAAPLPAGRYCLTAET 69 (116)
T ss_dssp -CBCEEEEEEETTTT---EECTTCEEEEEET--------T--EEEEEEECCTTSEECCSCSSCBCSSEEEEEECH
T ss_pred ccCCeeeEEeecCCC---cCCCCCEEEEEEc--------c--EeEEEeccCCCCCccccccccCCCceEEEEEeH
Confidence 3466887776443 5 9999999999532 1 2234467999998642 45789999999854
No 46
>1uy4_A Endo-1,4-beta-xylanase A; carbohydrate-binding module, thermodynamics, protein structure, protein-carbohydrate interactions; HET: XYP; 1.69A {Clostridium stercorarium} SCOP: b.18.1.10 PDB: 1uy1_A* 1uy3_A* 1uy2_A*
Probab=68.20 E-value=39 Score=29.74 Aligned_cols=76 Identities=18% Similarity=0.245 Sum_probs=48.1
Q ss_pred CcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCCCC
Q 010135 421 SSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTSP 500 (517)
Q Consensus 421 ~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s~ 500 (517)
+.++|.+-+|++.++.++|++++... ++..+-.++...+ --.|+..+.+|. +.+|...|+|.. +|
T Consensus 68 G~~~~~~rvas~~gg~ievrlds~~G--~~lgt~~v~~Tgg------w~~w~tv~~~v~---~~~G~h~lyl~f-~g--- 132 (145)
T 1uy4_A 68 GATGFSATVATEVNTSIQIRSDSPTG--TLLGTLYVSSTGS------WNTYNTVSTNIS---KITGVHDIVLVF-SG--- 132 (145)
T ss_dssp CEEEEEEEEECSSCEEEEEEESSTTS--CEEEEEEECCCSS------TTCCEEEEEEEE---EECSEEEEEEEE-SS---
T ss_pred CCEEEEEEEEeCCCcEEEEEECCCCC--cEEEEEEecCCCC------CcccEEEEEEec---CCCceEEEEEEE-eC---
Confidence 56666666666667899999997643 2333333332211 114566666664 468999999976 45
Q ss_pred CceEEEEEEEEec
Q 010135 501 FQGIMYDYIRLEG 513 (517)
Q Consensus 501 ~~~vmyD~I~Le~ 513 (517)
++-.|.++++.
T Consensus 133 --~~nl~~~~F~~ 143 (145)
T 1uy4_A 133 --PVNVDNFIFSR 143 (145)
T ss_dssp --CCEEEEEEEEE
T ss_pred --CeEEEEEEEEe
Confidence 37788888874
No 47
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=66.91 E-value=3.9 Score=36.97 Aligned_cols=62 Identities=13% Similarity=0.093 Sum_probs=42.4
Q ss_pred CeEEEEEEEEe-cCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceE----eCcccCcceEEEEEE
Q 010135 218 RGCVSGRLLVQ-DSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFS----IKNIRTGNYNLYAWV 287 (517)
Q Consensus 218 RG~VsG~v~~~-d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Ft----i~nVrpGtY~L~a~~ 287 (517)
|.-++=.|+.. .| +||.++.|-|.....++.|+. -.-++||++|+.. -....+|+|+|....
T Consensus 29 k~PLTtHVLDt~~G---~PA~gv~V~L~~~~~~~~~~~-----l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~t 95 (147)
T 4ank_A 29 KCPLMVKVLDAVRG---SPAINVAVHVFRKAADDTWEP-----FASGKTSESGELHGLTTEEEFVEGIYKVEIDT 95 (147)
T ss_dssp -CCEEEEEEETTTT---EECCSCEEEEEEECTTSCEEE-----EEEEECCTTSEECCSCCTTTCCSEEEEEEECH
T ss_pred CCCeEEEEEeCCCC---cCCCCCEEEEEEECCCCCeEE-----EEEEEeCCCCCCCCCCCccccCCceEEEEEEH
Confidence 55688877643 35 999999999975433334542 3346799999864 245788999998753
No 48
>2vzs_A CSXA, EXO-beta-D-glucosaminidase; hydrolase, GH2, glucosamine, glycoside hydrolase; HET: GCS; 1.85A {Amycolatopsis orientalis} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2x05_A* 2x09_A* 2vzo_A 2vzt_A* 2vzv_A* 2vzu_A*
Probab=66.47 E-value=1.2 Score=51.99 Aligned_cols=86 Identities=20% Similarity=0.230 Sum_probs=0.0
Q ss_pred EEEEEeCCCCCCCcEEEEEEEeccC--CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeee
Q 010135 409 QIKFKLDHVDRNSSYKLRVAIASAT--LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEG 486 (517)
Q Consensus 409 ~I~F~L~~~~~~~~~tLriala~a~--~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 486 (517)
.|.|++. ++..|.|+|+|-.|... ...+.|.|||..... +..++.+. +.. .+...++.| .|++|
T Consensus 945 ~v~~~V~-v~~aG~Y~l~iryan~~~~~r~~~l~VNG~~~~~----~v~~~~Tg-----~W~-~w~~~~~~v---~L~aG 1010 (1032)
T 2vzs_A 945 SVEWTVT-VPSAGTYDVVVRYANGTTTSRPLDFSVNGSISAS----GVAFGSTG-----TWP-AWTTKTVRV---TLAAG 1010 (1032)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEE-CCCCeEEEEEEEEEcCCCCCeeEEEEECCeEeee----EEEecCCC-----CCC-ccEEEEEEE---EECCC
Confidence 3566654 34578999999888754 467899999975310 11111110 110 133334444 38999
Q ss_pred ecEEEEEeecCCCCCceEEEEEEEE
Q 010135 487 ENTIFLKQPRCTSPFQGIMYDYIRL 511 (517)
Q Consensus 487 ~NtI~l~~~~g~s~~~~vmyD~I~L 511 (517)
.|+|+|....+. -++=.|+|.|
T Consensus 1011 ~NtI~~~~~~~~---g~~niD~i~v 1032 (1032)
T 2vzs_A 1011 VNKIKAVATTAN---GGPNVDKITL 1032 (1032)
T ss_dssp -------------------------
T ss_pred ceEEEEEEcCCc---CceEEEEEEC
Confidence 999999864221 1466677754
No 49
>4hg6_B Cellulose synthase subunit B; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=65.50 E-value=7.6 Score=43.33 Aligned_cols=77 Identities=18% Similarity=0.173 Sum_probs=52.5
Q ss_pred cEEEEEEeCCCCC---CCcEEEEEEEecc----CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEee
Q 010135 407 TWQIKFKLDHVDR---NSSYKLRVAIASA----TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIP 479 (517)
Q Consensus 407 ~w~I~F~L~~~~~---~~~~tLriala~a----~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ip 479 (517)
.-.|.|.|....- ....+|.+..+-+ ..+++.|.|||+-+. . ..+.+.. .|....+++.||
T Consensus 319 ~i~V~FrLPPDLfvw~~tga~L~L~YRYSp~l~~~S~L~VsLNgqfV~-S----lPL~~~~-------~g~~~~~~IpLP 386 (707)
T 4hg6_B 319 NRDIDFQLPDDWLLLASQKAQIGIDYGFAGGLPEGALLLVKVNGTTVR-M----LPLDRDA-------APVKPRLDIRFP 386 (707)
T ss_dssp EEEEEEECCSSCCCCSSCEEEEEECEEECSSCCTTCEEEEEETTEEEE-E----EESSSCC-------BSSCCCEEEEEE
T ss_pred CceeEEeCCCCeecccCCCceEEEEEecCCCCCCCCeEEEEECCEEEE-E----EEcCccc-------CCccceeEeecC
Confidence 5678888876542 2446666666654 258999999998664 1 2222211 134566899999
Q ss_pred CCCeeeeecEEEEEee
Q 010135 480 GTRFIEGENTIFLKQP 495 (517)
Q Consensus 480 a~~L~~G~NtI~l~~~ 495 (517)
+.+|+.|.|.|.|...
T Consensus 387 p~ll~~g~NqL~FeF~ 402 (707)
T 4hg6_B 387 ARLLHPGPNRLSFESV 402 (707)
T ss_dssp GGGCCSSEEEEEEEEE
T ss_pred HHHcCCCCceEEEEEE
Confidence 9999889999999864
No 50
>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}
Probab=65.29 E-value=14 Score=42.40 Aligned_cols=80 Identities=18% Similarity=0.097 Sum_probs=49.9
Q ss_pred CeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEE--Cceeeeee
Q 010135 218 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWV--PGFVGDYR 295 (517)
Q Consensus 218 RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~--~G~~G~~~ 295 (517)
.|+|+-+=... ...|..+|...|....+ .....-..||++|.++|.+++||+|+|.=-. .|+.-+ .
T Consensus 47 ~G~~~i~K~d~---~~~~L~GA~F~l~~~~~--------~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~-~ 114 (893)
T 2ww8_A 47 IGKVVIKETGE---GGALLGDAVFELKNNTD--------GTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPS-T 114 (893)
T ss_dssp CEEEEEEEECS---TTCBCCCCEEEEEETTT--------CCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCC-C
T ss_pred eEEEEEEEECC---CCCccCCCEEEEEECCC--------CeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecC-C
Confidence 56666443322 23788999988865321 1112334589999999999999999998775 443211 1
Q ss_pred eeeEEEEeCCceee
Q 010135 296 SDALVTITSGSNIK 309 (517)
Q Consensus 296 ~~~~VtV~aG~t~~ 309 (517)
..-.|+|++.+.+.
T Consensus 115 ~~~~v~v~~~g~~~ 128 (893)
T 2ww8_A 115 KQWTVEVEKNGRTT 128 (893)
T ss_dssp CEEEEEECTTCCEE
T ss_pred ccEEEEECCCceEE
Confidence 23357777555443
No 51
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=62.59 E-value=7.7 Score=37.19 Aligned_cols=75 Identities=17% Similarity=0.217 Sum_probs=45.5
Q ss_pred ccccCceEEEecCCCCCCCccc-ccccc-------ceEEEeCCCcceEeCcccCcceEEEEEE--CceeeeeeeeeEEEE
Q 010135 233 VISANGAYVGLAPPGDVGSWQT-ECKDY-------QFWTTADEDGCFSIKNIRTGNYNLYAWV--PGFVGDYRSDALVTI 302 (517)
Q Consensus 233 ~~pa~~a~V~L~~~~~~g~~~~-~~~~y-------qywt~td~~G~Fti~nVrpGtY~L~a~~--~G~~G~~~~~~~VtV 302 (517)
..+..+|...|.... |..-. ...++ .--..||++|.|+|.++++|+|.|.=-. .|+.=. ...-.|+|
T Consensus 140 ~~~L~GA~F~l~~~~--g~~~~~~~~g~~~~~~~~~~~~~Td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l~-~~~~~f~i 216 (239)
T 2pz4_A 140 KKPLAGVVFELYEKN--GRTPIRVKNGVHSQDIDAAKHLETDSSGHIRISGLIHGDYVLKEIETQSGYQIG-QAETAVTI 216 (239)
T ss_dssp EEECCSCEEEEEETT--CSSCBCEETTEECCSTTCBSCEECCTTSEEEEEEEESEEEEEEEEECCTTBCCC-CSEEEEEE
T ss_pred CcccCCCEEEEEeCC--CCEEEeecccceecccccceEEEECCCCeEEECCCCCceEEEEEEECCCCcCcC-CccEEEEE
Confidence 467888988887531 11110 00000 0124589999999999999999987653 343210 11346888
Q ss_pred eCCceeee
Q 010135 303 TSGSNIKM 310 (517)
Q Consensus 303 ~aG~t~~l 310 (517)
++++++.+
T Consensus 217 ~~~~~~~~ 224 (239)
T 2pz4_A 217 EKSKTVTV 224 (239)
T ss_dssp CTTSEEEE
T ss_pred eCCCeEEE
Confidence 88886554
No 52
>3fn9_A Putative beta-galactosidase; structural genomics, glycosidas hydrolase, PSI-2, protein structure initiative; 2.70A {Bacteroides fragilis}
Probab=62.34 E-value=4.8 Score=44.92 Aligned_cols=69 Identities=25% Similarity=0.154 Sum_probs=46.6
Q ss_pred cEEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeee
Q 010135 407 TWQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEG 486 (517)
Q Consensus 407 ~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 486 (517)
-.+=.|.+++........|++.- ......|.|||+.++ .-.|-+..++|+|+ ..|+.|
T Consensus 63 wYr~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg------------------~~~~g~~~f~~dIt-~~l~~G 120 (692)
T 3fn9_A 63 YYRKTQFFPHDLEGKRVFLRFEG---VGACAEVYVNGKLAG------------------THKGGYSAFACEIG-TALKLG 120 (692)
T ss_dssp EEEEEEEECGGGTTCEEEEEESC---CBSEEEEEETTEEEE------------------EEECTTSCEEEECG-GGCCTT
T ss_pred EEEEEEEECchhCCCeEEEEECC---ccEeeEEEECCEEee------------------eEcCCcceEEEECh-HhcCCC
Confidence 44556888765433334555543 346778999998552 11234567899998 888999
Q ss_pred -ecEEEEEeecC
Q 010135 487 -ENTIFLKQPRC 497 (517)
Q Consensus 487 -~NtI~l~~~~g 497 (517)
+|+|.+.+.+.
T Consensus 121 ~~N~l~V~v~~~ 132 (692)
T 3fn9_A 121 AENEIIVKADNK 132 (692)
T ss_dssp EEEEEEEEEECC
T ss_pred CceEEEEEEECC
Confidence 89999998654
No 53
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=60.56 E-value=9.3 Score=38.97 Aligned_cols=47 Identities=15% Similarity=0.193 Sum_probs=34.3
Q ss_pred ccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEE
Q 010135 233 VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWV 287 (517)
Q Consensus 233 ~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~ 287 (517)
..+..+|...|.... +....--..||++|.++|.++++|+|.|.=-.
T Consensus 19 ~~~L~GA~F~l~~~~--------g~~~~~~~tTd~~G~~~~~~L~~G~Y~~~Et~ 65 (355)
T 3kpt_A 19 EKAMAGAVFSLFKKD--------GTEVKKELATDANGHIRVQGLEYGEYYFQETK 65 (355)
T ss_dssp GCBCCSCEEEEEETT--------SCEEEEEEECCTTSEEEEEEEESEEEEEEEEE
T ss_pred CCCcCCcEEEEEECC--------CCEEEEEEEECCCCeEEECCcCCceEEEEEEe
Confidence 378889999886431 11111234689999999999999999997654
No 54
>3c7f_A Xylanase D, endo-1,4-beta-xylanase; 5-bladed beta-propeller fold, beta-sandwich, xylan degradati hydrolase; HET: XYP; 1.55A {Bacillus subtilis} PDB: 3c7e_A* 3c7h_A* 3c7o_A* 3c7g_A*
Probab=59.18 E-value=51 Score=34.56 Aligned_cols=81 Identities=12% Similarity=0.217 Sum_probs=48.4
Q ss_pred CCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEEeecCCC
Q 010135 420 NSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLKQPRCTS 499 (517)
Q Consensus 420 ~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~~~~g~s 499 (517)
.+.++|++-+|+.++++++|++++... ++..+-.++.+.+ -..|+..+.+| .. .+|.+.|+|....+.+
T Consensus 405 ~g~~~~~~~vas~~~g~ievr~~s~~G--~~~g~~~v~~tgg------~~~w~~~~~~v--~~-~~G~h~ly~~f~g~~~ 473 (487)
T 3c7f_A 405 GGARSFKANVASTLGGKIEVRLDSADG--KLVGTLNVPSTGG------AQTWREIETAV--SG-ATGVHKVFFVFTGTGT 473 (487)
T ss_dssp TCEEEEEEEEEESSCEEEEEEESSTTS--CEEEEEEECCCSE------EEEEEEEEEEC--CS-CCSEEEEEEEEECSCS
T ss_pred CCccEEEEEEEeCCCcEEEEEECCCCC--cEEEEEEeCCCCC------CcccEEEEEEE--cC-CCceEEEEEEEECCCC
Confidence 367777777777668899999987643 2333333332211 12445555555 33 5899999998755422
Q ss_pred CCceEEEEEEEEe
Q 010135 500 PFQGIMYDYIRLE 512 (517)
Q Consensus 500 ~~~~vmyD~I~Le 512 (517)
. .-+-+|.++++
T Consensus 474 ~-~l~~~~~~~f~ 485 (487)
T 3c7f_A 474 G-NLFNFDYWQFT 485 (487)
T ss_dssp S-CCCEEEEEEEE
T ss_pred c-ceEEEEEEEEE
Confidence 1 12566777775
No 55
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A
Probab=57.23 E-value=9.1 Score=41.82 Aligned_cols=66 Identities=17% Similarity=0.147 Sum_probs=43.4
Q ss_pred EEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 010135 408 WQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 487 (517)
Q Consensus 408 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 487 (517)
.+-.|.+++........|++.- ....-.|.|||+.++ .-.|-+..++++|+ ..|+.|+
T Consensus 71 Y~~~f~~p~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg------------------~~~~~~~p~~~dit-~~l~~G~ 128 (605)
T 3lpf_A 71 YQREVFIPKGWAGQRIVLRFDA---VTHYGKVWVNNQEVM------------------EHQGGYTPFEADVT-PYVIAGK 128 (605)
T ss_dssp EEEEEECCTTCSSCEEEEEESC---CBSEEEEEESSCEEE------------------EECCSSSCEEEECG-GGCCTTS
T ss_pred EEEEEECCcccCCCEEEEEECC---cceEEEEEECCEEEE------------------EEcCCCCcceeech-hhccCCC
Confidence 3456888765433334455443 345678999998552 11234567899998 7888998
Q ss_pred c-EEEEEee
Q 010135 488 N-TIFLKQP 495 (517)
Q Consensus 488 N-tI~l~~~ 495 (517)
| +|++.+.
T Consensus 129 nn~l~V~v~ 137 (605)
T 3lpf_A 129 SVRITVCVN 137 (605)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEEEe
Confidence 6 8999884
No 56
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=56.44 E-value=21 Score=39.77 Aligned_cols=59 Identities=15% Similarity=0.357 Sum_probs=41.2
Q ss_pred CeEEEEEEEEecCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEE
Q 010135 218 RGCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAW 286 (517)
Q Consensus 218 RG~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~ 286 (517)
.|...-++.+.|.....++..+.|.|..+ .+..|+++++.+|...|..+.||+|+|++-
T Consensus 445 ~~~~~~~v~vtd~~~~~~~~~~~v~l~~~----------~~~~~~~~t~~dg~~~~~~~~~G~Y~~~v~ 503 (671)
T 1r6v_A 445 GGVEEFQVVVTDAKGNFGVPTVFVSMMRD----------NGSCYYAKTGPDGIARFPHIDSGTYDIFVG 503 (671)
T ss_dssp SEEEEEEEEEECTTSCSBCTTEEEEEECS----------SSCCEEEECCTTSEEEEEEEECEEEEEEEE
T ss_pred CCccceEEEEecCCCCcCcceeEEEEecC----------CCceEecccCCCCceeeeccCceEEEEEEe
Confidence 34433455555632223344566777654 355799999999999999999999999985
No 57
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis}
Probab=55.59 E-value=8 Score=42.67 Aligned_cols=68 Identities=13% Similarity=0.144 Sum_probs=45.1
Q ss_pred cEEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeee
Q 010135 407 TWQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEG 486 (517)
Q Consensus 407 ~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G 486 (517)
..+-.|.+++........|++.-+ .....|.|||+.++ .-.|-+..++|+|.. .|+.|
T Consensus 52 wYr~~f~~p~~~~~~~~~L~f~gv---~~~a~V~vNG~~vg------------------~~~~~~~~~~~dit~-~l~~G 109 (667)
T 3cmg_A 52 NYEKALYIRPEWKGKRLFLRFDGV---NSIADVFINRKHIG------------------EHRGGYGAFIFEITD-LVKYG 109 (667)
T ss_dssp EEEEEEECCGGGTTSEEEEEESCC---BSEEEEEETTEEEE------------------EEECSSSCEEEECTT-TSCTT
T ss_pred EEEEEEECCcccCCCEEEEEECCc---cceeEEEECCEEEe------------------eecCCcccEEEECCH-HHCCC
Confidence 445568887643223345554432 45678999998552 012445678999986 78888
Q ss_pred -ecEEEEEeec
Q 010135 487 -ENTIFLKQPR 496 (517)
Q Consensus 487 -~NtI~l~~~~ 496 (517)
+|+|.+.+.+
T Consensus 110 ~~N~l~V~v~~ 120 (667)
T 3cmg_A 110 EKNSVLVRANN 120 (667)
T ss_dssp SEEEEEEEEEC
T ss_pred CCcEEEEEEec
Confidence 8999999865
No 58
>1yq2_A Beta-galactosidase; glycosyl hydrolase family 2, TIM barrel, hexamer; 1.90A {Arthrobacter SP} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3
Probab=53.91 E-value=8.2 Score=45.06 Aligned_cols=68 Identities=15% Similarity=0.220 Sum_probs=44.4
Q ss_pred cEEEEEEeCCCC--CC-CcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCe
Q 010135 407 TWQIKFKLDHVD--RN-SSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRF 483 (517)
Q Consensus 407 ~w~I~F~L~~~~--~~-~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L 483 (517)
-.+=.|++++.. .. ....|++.-+ .....|.|||+.++ . -.|-+..++|+|. ..|
T Consensus 121 wYrr~F~vp~~~~~~g~~rv~L~F~gv---~~~a~V~vNG~~VG-------~-----------~~gg~~p~~~DIT-~~L 178 (1024)
T 1yq2_A 121 DFRRRFDVPAQWFESTTAALTLRFDGV---ESRYKVWVNGQEIG-------V-----------GSGSRLAQEFDVS-DAL 178 (1024)
T ss_dssp EEEEEEEECGGGGSTTEEEEEEEESCE---ESCEEEEETTEEEE-------E-----------ECCTTSCEEEECT-TTC
T ss_pred EEEEEeEECchHhcCCCceEEEEECCC---CceEEEEECCEEEE-------E-----------EeCCccceEEecH-Hhc
Confidence 345568887643 22 2344444333 34578999998552 0 1244567889997 688
Q ss_pred eeeecEEEEEeec
Q 010135 484 IEGENTIFLKQPR 496 (517)
Q Consensus 484 ~~G~NtI~l~~~~ 496 (517)
+.|+|+|.+.+.+
T Consensus 179 k~G~N~L~V~V~~ 191 (1024)
T 1yq2_A 179 RAGSNLLVVRVHQ 191 (1024)
T ss_dssp CSEEEEEEEEEES
T ss_pred cCCCcEEEEEEEe
Confidence 9999999999964
No 59
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=52.86 E-value=23 Score=30.71 Aligned_cols=63 Identities=17% Similarity=0.263 Sum_probs=38.4
Q ss_pred cccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEE--CceeeeeeeeeEEEEeCCceee
Q 010135 234 ISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWV--PGFVGDYRSDALVTITSGSNIK 309 (517)
Q Consensus 234 ~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~--~G~~G~~~~~~~VtV~aG~t~~ 309 (517)
.+..+|...|.... .+--.=|+ ++|.++|.++++|+|+|.=-. .|+.= ...-.++|++...+.
T Consensus 40 ~~L~GA~F~l~~~~--------g~~v~~~~---sdG~~~~~~L~~G~Y~l~EtkAP~GY~l--~~~i~ftV~~~g~v~ 104 (121)
T 2x5p_A 40 KELAGATMELRDSS--------GKTISTWI---SDGQVKDFYLMPGKYTFVETAAPDGYEV--ATAITFTVNEQGQVT 104 (121)
T ss_dssp CBCCCCEEEEECTT--------SCEEEEEE---CCSSCEEEEECSEEEEEEEEECCTTCCC--CCCEEEEECTTCCEE
T ss_pred CCcCCCEEEEEECC--------CCEEEEEE---eCCEEEEcccCCcEEEEEEEeCCCCccc--CCCEEEEEcCCceEE
Confidence 67888988887531 11122344 479999999999999997653 23221 122346666544433
No 60
>3bga_A Beta-galactosidase; NYSGXRC, protein structure initiative II (PSI-II), glycosyl hydrolase family 2, jelly-roll fold; 2.10A {Bacteroides thetaiotaomicron vpi-5482} PDB: 3dec_A
Probab=52.55 E-value=8.9 Score=44.67 Aligned_cols=67 Identities=21% Similarity=0.122 Sum_probs=44.9
Q ss_pred EEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 010135 408 WQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 487 (517)
Q Consensus 408 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 487 (517)
.+=.|.+++........|++.-+ .....|.|||+.++ .-.|-+..++|+|. ..|+.|+
T Consensus 130 Yrr~F~vp~~~~g~~v~L~F~gv---~~~a~V~vNG~~vG------------------~~~gg~~p~~~DIT-~~L~~G~ 187 (1010)
T 3bga_A 130 YRRTFKVPADWKGRRVVLCCEGV---ISFYYVWVNGKLLG------------------YNQGSKTAAEWDIT-DVLSEGE 187 (1010)
T ss_dssp EEEEEECCGGGTTSEEEEEESCE---ESEEEEEETTEEEE------------------EEECSSSCEEEECG-GGCCSSE
T ss_pred EEEEeEeCcccCCCEEEEEECCC---CceeEEEECCEEEe------------------eEeCCCCcceeehh-hhccCCC
Confidence 44568887643223345555433 34678999998552 01244667899998 4889999
Q ss_pred cEEEEEeec
Q 010135 488 NTIFLKQPR 496 (517)
Q Consensus 488 NtI~l~~~~ 496 (517)
|+|.+.+.+
T Consensus 188 N~L~V~V~~ 196 (1010)
T 3bga_A 188 NVVALEVYR 196 (1010)
T ss_dssp EEEEEEEES
T ss_pred cEEEEEEEe
Confidence 999999864
No 61
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=52.04 E-value=13 Score=43.03 Aligned_cols=68 Identities=19% Similarity=0.133 Sum_probs=41.9
Q ss_pred EEEEeCCCCCCCcEEEEEEEeccC---CCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCee-e
Q 010135 410 IKFKLDHVDRNSSYKLRVAIASAT---LAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFI-E 485 (517)
Q Consensus 410 I~F~L~~~~~~~~~tLriala~a~---~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~-~ 485 (517)
=.|+|+-..+.-...|.+-+.... .-|.++.|||+..+.=+ +.+ | -..+|.||.+.|. .
T Consensus 889 t~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gkyv---~~i------------G--PQt~FpvP~GILn~~ 951 (1003)
T 3og2_A 889 AKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGKYV---SNI------------G--PQTEFPVPEGILDYN 951 (1003)
T ss_dssp EEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEEEE---TTT------------C--CCCEEEECBTTBCTE
T ss_pred EEeecCCCcccCceeEEEEECCCCCCcceEEEEEEeceeeeeec---CCC------------C--CcceecCCcccccCC
Confidence 456664320111234444444333 35999999998664100 111 1 2357999999999 8
Q ss_pred eecEEEEEe
Q 010135 486 GENTIFLKQ 494 (517)
Q Consensus 486 G~NtI~l~~ 494 (517)
|+|+|-|++
T Consensus 952 G~Ntialal 960 (1003)
T 3og2_A 952 GDNWIGVAL 960 (1003)
T ss_dssp EEEEEEEEE
T ss_pred CcceEEEEE
Confidence 999999988
No 62
>2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A*
Probab=51.94 E-value=16 Score=31.90 Aligned_cols=57 Identities=18% Similarity=0.200 Sum_probs=39.3
Q ss_pred eEEEEEEEEec-CCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcce-----EeCcccCcceEEEEEE
Q 010135 219 GCVSGRLLVQD-SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCF-----SIKNIRTGNYNLYAWV 287 (517)
Q Consensus 219 G~VsG~v~~~d-~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~F-----ti~nVrpGtY~L~a~~ 287 (517)
+.|+=.|+..- | +||.++.|.|.... |+ ...-+.||+||+. .-..+++|.|+|..-.
T Consensus 9 ~~lstHVLDt~~G---~PAagv~V~L~~~~----~~-----~l~~~~Tn~DGR~~~~~~~~~~~~~G~Y~l~F~t 71 (121)
T 2h0e_A 9 GKLTTHILDLTCG---KPAANVKIGLKRLG----ES-----IMKEVYTNNDGRVDVPLLAGEELMSGEYVMEFHA 71 (121)
T ss_dssp CEEECCEEETTTT---EECTTCEEEEEETT----SC-----CCEEEECCTTSSCSSCSEEGGGCCSEEEEEEECH
T ss_pred CCeeEEEecCCCc---CCCCCCEEEEEECC----ce-----EEEEEecCCCCCccCCcCCCCCcCceEEEEEEEh
Confidence 35665555332 5 99999999996421 32 2445789999986 3346889999999753
No 63
>3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A
Probab=50.50 E-value=9.2 Score=34.20 Aligned_cols=62 Identities=15% Similarity=0.167 Sum_probs=41.1
Q ss_pred CeEEEEEEEEec-CCCccccCceEEEecCCCC-CCCccccccccceEEEeCCCcceE----eCcccCcceEEEEEE
Q 010135 218 RGCVSGRLLVQD-SNDVISANGAYVGLAPPGD-VGSWQTECKDYQFWTTADEDGCFS----IKNIRTGNYNLYAWV 287 (517)
Q Consensus 218 RG~VsG~v~~~d-~~~~~pa~~a~V~L~~~~~-~g~~~~~~~~yqywt~td~~G~Ft----i~nVrpGtY~L~a~~ 287 (517)
++.|+=.|+..- | +||.++.|-|....+ .+.|.. -.-+.||++|+.. -..+.+|+|+|..-.
T Consensus 25 ~~~LTtHVLDt~~G---~PAagv~V~L~~~~~~~~~w~~-----l~~~~Tn~DGR~~~ll~~~~~~~G~Y~L~F~t 92 (138)
T 3iwv_A 25 LSPLSTHVLNIAQG---VPGANMTIVLHRLDPVSSAWNI-----LTTGITNDDGRCPGLITKENFIAGVYKMRFET 92 (138)
T ss_dssp -CCEECCEEETTTT---EECTTCEEEEEEECSSSCCEEE-----EEEEECCTTSCCTTSSCTTTCCSEEEEEEECH
T ss_pred CCCceEEEeecCCc---cCCCCCEEEEEEECCCCCCcEE-----EEEEecCCCCCcCCccCcccCCCceEEEEEeh
Confidence 567877766433 5 999999999964321 123331 2335799999764 235789999999864
No 64
>3phz_A Ricin B-related lectin; beta trefoil, saccharide binding lectin, 2,6-sialyl-lactosam sugar binding protein; HET: NAG GAL SIA; 1.70A {Polyporus squamosus}
Probab=50.37 E-value=26 Score=34.93 Aligned_cols=97 Identities=15% Similarity=0.313 Sum_probs=56.8
Q ss_pred EEEEEEecCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEECceeeeeeeeeEEE
Q 010135 222 SGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVT 301 (517)
Q Consensus 222 sG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~~G~~G~~~~~~~Vt 301 (517)
+|+++...+ .-.+.++.|.+ |.......|-|+..+.+|.|+|.|+..|.+ +.
T Consensus 67 SGKcLDV~g--~sTadGa~V~q--------W~~nGg~NQqW~l~~~~G~y~I~n~~SGkc------------------LD 118 (286)
T 3phz_A 67 AGSYMDLAG--HAATDGTAIIG--------YRPTGGDNQKWIISQINDVWKIKSKETGTF------------------VT 118 (286)
T ss_dssp TCCEEEEGG--GCCSTTEEEEE--------ECCCCCGGGCEEEEESSSCEEEEETTTCCE------------------EE
T ss_pred CCcEEEeCC--CcCCCCCeEEE--------eCCCCChhcEEEEEcCCCeEEEEECCCCcE------------------EE
Confidence 466554432 12356778877 444456779998877789999999888853 22
Q ss_pred EeCCceeeecc-eEEcCC-CCCCCeEEEeccCCCcccc-----ccCCCCccc
Q 010135 302 ITSGSNIKMGD-LVYEPP-RDGPTLWEIGIPDRSAREF-----NVPDPDPKY 346 (517)
Q Consensus 302 V~aG~t~~l~~-l~~~~~-~~~~~LweIG~~Drt~~~F-----~~~d~~~~~ 346 (517)
|..|.++.-|. .+|+.. ....+.|++..-..++.++ ++|+..+++
T Consensus 119 V~~gsttanGaV~qWt~~tgg~NQqW~~~~vs~tg~~i~~~l~~~p~~~~~~ 170 (286)
T 3phz_A 119 LLNGDGGGTGTVVGWQNITNNTSQNWTFQKLSQTGANVHATLLACPALRQDF 170 (286)
T ss_dssp EETC---CCCEEEEESCCCSSCTTCEEEEECEEEHHHHHHHHHHCTTTCSCC
T ss_pred eCCCCcCCCceEEEccCCCCCccCcEEEEEccCCcccceehhccCCccCCCE
Confidence 22222211111 245421 2567999998777777665 345555554
No 65
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=50.04 E-value=11 Score=42.68 Aligned_cols=68 Identities=15% Similarity=0.172 Sum_probs=44.8
Q ss_pred EEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 010135 408 WQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 487 (517)
Q Consensus 408 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 487 (517)
.+=.|.+++........|++.- ......|.|||+.++ . -.|-+..++|+|+. .|+.|+
T Consensus 70 Yrk~f~vp~~~~~~~v~L~f~g---v~~~a~V~vNG~~vG-------~-----------~~~g~~pf~~DIT~-~Lk~G~ 127 (801)
T 3gm8_A 70 YRKTFTIPSKWKNKKVQILFEG---VYLNSEVWINGHWLG-------K-----------RPNGYISFVYDLTP-YLQEGK 127 (801)
T ss_dssp EEEEEECCSGGGSCEEEEEESC---CBSCEEEEETTEEEE-------E-----------ECCSSCCEEEECGG-GCCSSE
T ss_pred EEEEEEcCcccCCCEEEEEECc---cceEEEEEECCEEee-------c-----------ccCCcccEEEECcH-hccCCC
Confidence 4556888764433334455433 245678999998552 0 11345678999976 578999
Q ss_pred cEEEEEeecC
Q 010135 488 NTIFLKQPRC 497 (517)
Q Consensus 488 NtI~l~~~~g 497 (517)
|+|.+.+.+.
T Consensus 128 N~L~V~V~n~ 137 (801)
T 3gm8_A 128 NQIAVKVDHS 137 (801)
T ss_dssp EEEEEEEEEC
T ss_pred cEEEEEEECC
Confidence 9999998653
No 66
>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3
Probab=48.60 E-value=76 Score=33.71 Aligned_cols=74 Identities=18% Similarity=0.109 Sum_probs=47.7
Q ss_pred eEEEEEEEEecCCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeC--cccCcceEEEEEECceeeeeee
Q 010135 219 GCVSGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIK--NIRTGNYNLYAWVPGFVGDYRS 296 (517)
Q Consensus 219 G~VsG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~--nVrpGtY~L~a~~~G~~G~~~~ 296 (517)
-++.-+|+..+| .|..+..|.+..++.. .-..--..||++|.+++. .-++|+|++.|..+|. .+
T Consensus 28 ~~ltatV~D~~G---npv~g~~Vtf~~~~g~-------~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~----s~ 93 (492)
T 1cwv_A 28 ITVEFTVADFEG---KPLAGQEVVITTNNGA-------LPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQ----RQ 93 (492)
T ss_dssp EEEEEEEECTTS---CBCCSCEEEEECCTTC-------BSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTE----EE
T ss_pred EEEEEEEEcCCC---CCCCCCEEEEEECCCc-------cccccceeeCCCceEEEEEEcCcceEEEEEEEECCc----cc
Confidence 456666655445 6777888877643211 111234578999987654 5689999999998773 23
Q ss_pred eeEEEEeCCc
Q 010135 297 DALVTITSGS 306 (517)
Q Consensus 297 ~~~VtV~aG~ 306 (517)
...|++.+|.
T Consensus 94 s~~v~f~a~~ 103 (492)
T 1cwv_A 94 SVDTHFVKGT 103 (492)
T ss_dssp EEEEEEECCC
T ss_pred eeEEEEeecc
Confidence 3456777664
No 67
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=45.92 E-value=12 Score=42.62 Aligned_cols=65 Identities=12% Similarity=0.170 Sum_probs=43.0
Q ss_pred EEEEEeCCCC-CCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 010135 409 QIKFKLDHVD-RNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 487 (517)
Q Consensus 409 ~I~F~L~~~~-~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 487 (517)
+=.|.+++.. ......|++.- ....-.|.|||+.++ ...|-+..++|+|+. .|+.|+
T Consensus 69 r~~f~~p~~~~~~~~~~L~f~g---v~~~a~V~vNG~~vg------------------~~~~~~~~~~~dIt~-~l~~G~ 126 (848)
T 2je8_A 69 RTSFIVSEEQLNRDGIQLIFEG---LDTYADVYLNGSLLL------------------KADNMFVGYTLPVKS-VLRKGE 126 (848)
T ss_dssp EEEEEECHHHHTSSEEEEEESC---CBSEEEEEETTEEEE------------------EECBTTCCEEEECGG-GCCSEE
T ss_pred EEEEEcChhhcCCCeEEEEECC---CCceeEEEECCEEec------------------cccCCCCCEEEcChH-hhcCCC
Confidence 3457776532 22335555543 345678999998553 112446778999987 788999
Q ss_pred cEEEEEee
Q 010135 488 NTIFLKQP 495 (517)
Q Consensus 488 NtI~l~~~ 495 (517)
|+|.+.+.
T Consensus 127 N~L~V~v~ 134 (848)
T 2je8_A 127 NHLYIYFH 134 (848)
T ss_dssp EEEEEEEE
T ss_pred cEEEEEEe
Confidence 99999974
No 68
>2pz4_A Protein GBS052; SPAB, GRAM-positive pilins, adhesions, IGG-like domain, cell adhesion; 1.80A {Streptococcus agalactiae} PDB: 3phs_A
Probab=45.56 E-value=8 Score=37.08 Aligned_cols=26 Identities=19% Similarity=0.201 Sum_probs=22.3
Q ss_pred EEEeCCCcceEeCcccCcceEEEEEE
Q 010135 262 WTTADEDGCFSIKNIRTGNYNLYAWV 287 (517)
Q Consensus 262 wt~td~~G~Fti~nVrpGtY~L~a~~ 287 (517)
-..||++|.++|.++++|+|.|.=..
T Consensus 71 ~~tTd~~G~~~~~~L~~G~Y~v~Et~ 96 (239)
T 2pz4_A 71 EATTNQQGKATFNQLPDGIYYGLAVK 96 (239)
T ss_dssp EEECCTTSEEEEEEEESEEEEEEEEE
T ss_pred EEEECCCCeEEECCCCCeeEEEEEEE
Confidence 35689999999999999999987653
No 69
>4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus}
Probab=42.94 E-value=82 Score=29.74 Aligned_cols=63 Identities=17% Similarity=0.299 Sum_probs=41.6
Q ss_pred CeEEEEEEEEecCCC-ccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEEECc
Q 010135 218 RGCVSGRLLVQDSND-VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAWVPG 289 (517)
Q Consensus 218 RG~VsG~v~~~d~~~-~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~~~G 289 (517)
-.+++|+|. -+|.. .....++-|-|.+.| |.. .+.|.+ ....+|.|+ ..+=.|+|+|..-..|
T Consensus 7 ~a~l~G~iv-~tgE~i~~~~~gv~i~l~e~g----~~~--~~~~~~-~v~qDGtf~-~~lF~G~Yki~~~~nG 70 (202)
T 4fxt_A 7 KATLTGKAI-YDGEAVGVRSGSSEFALFQDG----YAL--KGSIPV-YIAQDGSYS-VSLFNGDYKLVRMGNA 70 (202)
T ss_dssp EEEEEEEEE-ETTEECBCCTTTEEEEEECCC----------CCEEE-EBCTTSEEE-EEEESEEEEEEEEETC
T ss_pred CceEEEEEE-ECCCEeeecCCceEEEEEEcc----cCC--CCCeeE-EEcCCCcEE-EEEEcceeEEEECCCC
Confidence 478999998 34321 122456888887653 442 244444 378899999 8999999999965556
No 70
>3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A
Probab=42.89 E-value=31 Score=34.99 Aligned_cols=63 Identities=21% Similarity=0.273 Sum_probs=40.1
Q ss_pred EEEEEEEec--CCCccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEE
Q 010135 221 VSGRLLVQD--SNDVISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAW 286 (517)
Q Consensus 221 VsG~v~~~d--~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~ 286 (517)
..|.|.+.. ..+..+..+|...|... +|..-.. .+...-..+|++|.|.|.++++|+|.|.=-
T Consensus 249 ~tg~i~i~K~d~~~~~~L~GA~F~l~~~--~g~~~~~-~~~~~~~~td~~G~~~~~~L~~G~Y~l~E~ 313 (355)
T 3kpt_A 249 TTGIIELTKIDSANKNKMKGAEFVLKDN--NGKIVVV-AGKEVTGVSDENGVIKWSNIPYGDYQIFET 313 (355)
T ss_dssp CEEEEEEEEEETTTCCBCSCCEEEEEET--TSCBCBS-SSSBCEEECCTTSEEEEEEEESSEEEEEEE
T ss_pred cccceEEEEEeCCCCcccCCCEEEEEeC--CCCEEEe-ccceEEEEECCCCeEEECcCCCceEEEEEE
Confidence 356554443 33346888998888742 1221111 111223468999999999999999999866
No 71
>1jz7_A Lactase, beta-galactosidase, LACZ; TIM barrel (alpha/beta barrel), jelly-roll barrel, immunoglobulin, beta supersandwich, hydrolase; HET: GAL; 1.50A {Escherichia coli} SCOP: b.1.4.1 b.1.4.1 b.18.1.5 b.30.5.1 c.1.8.3 PDB: 1hn1_A 1jyx_A* 1jz3_A* 1jz4_A* 1jz5_A* 1jz6_A* 1dp0_A* 3iap_A* 1jz8_A* 1jyn_A* 1jyv_A* 1jyw_A* 3iaq_A* 1px3_A 1px4_A* 3czj_A* 3i3e_A 3i3d_A* 3i3b_A 3dym_A ...
Probab=41.66 E-value=11 Score=44.00 Aligned_cols=68 Identities=12% Similarity=0.098 Sum_probs=44.5
Q ss_pred cEEEEEEeCCCCC-CCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeee
Q 010135 407 TWQIKFKLDHVDR-NSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIE 485 (517)
Q Consensus 407 ~w~I~F~L~~~~~-~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 485 (517)
..+-.|.+++... .....|++.-+ .....|.|||+.++ .-.|-+..++|+|.. .|+.
T Consensus 122 ~Yrr~F~vp~~~~~~~~v~L~F~gv---~~~a~V~vNG~~vG------------------~~~gg~~p~~~DIT~-~L~~ 179 (1023)
T 1jz7_A 122 CYSLTFNVDESWLQEGQTRIIFDGV---NSAFHLWCNGRWVG------------------YGQDSRLPSEFDLSA-FLRA 179 (1023)
T ss_dssp EEEEEEEECHHHHHSSEEEEEESCE---ESEEEEEETTEEEE------------------EEECTTSCEEEECTT-TCCS
T ss_pred EEEEEEEeCchhcCCCEEEEEECCC---CcceEEEECCEEEc------------------cccCCCCceEEecHh-hccC
Confidence 4456688865322 23345555433 34678999998552 012335578899976 7889
Q ss_pred eecEEEEEeec
Q 010135 486 GENTIFLKQPR 496 (517)
Q Consensus 486 G~NtI~l~~~~ 496 (517)
|+|+|.+.+.+
T Consensus 180 G~N~L~V~V~~ 190 (1023)
T 1jz7_A 180 GENRLAVMVLR 190 (1023)
T ss_dssp EEEEEEEEEES
T ss_pred CCcEEEEEEEe
Confidence 99999999864
No 72
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=40.50 E-value=15 Score=40.34 Aligned_cols=67 Identities=24% Similarity=0.379 Sum_probs=42.3
Q ss_pred ccEEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeee
Q 010135 406 TTWQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIE 485 (517)
Q Consensus 406 ~~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 485 (517)
+=.+-.|++++. +. .+|-...-+.=+|.|||+.++. -+ .++- ..++| ||+++|++
T Consensus 509 ~~yk~~f~~~~~---~D----t~Ld~~g~gKG~vwVNG~nlGR-YW---~~GP-----------qqtlY---vP~~~Lk~ 563 (612)
T 3d3a_A 509 AYYRSTFNLNEL---GD----TFLNMMNWSKGMVWVNGHAIGR-YW---EIGP-----------QQTLY---VPGCWLKK 563 (612)
T ss_dssp EEEEEEEEESSC---CB----EEEECTTCCEEEEEETTEEEEE-EE---TTCS-----------CCEEE---ECGGGCCS
T ss_pred EEEEEEEECCCC---Cc----EEEecCCCCcEEEEECCEeEEe-EE---ecCC-----------EEEEE---ecHHHcCC
Confidence 345666787532 22 3344455678899999998862 22 2210 22444 99999999
Q ss_pred eecEEEEEeecC
Q 010135 486 GENTIFLKQPRC 497 (517)
Q Consensus 486 G~NtI~l~~~~g 497 (517)
|.|+|.|=-..+
T Consensus 564 g~N~ivvfE~~~ 575 (612)
T 3d3a_A 564 GENEIIILDMAG 575 (612)
T ss_dssp EEEEEEEEESSC
T ss_pred CCcEEEEEEEcC
Confidence 999887654444
No 73
>3oba_A Beta-galactosidase; TIM barrel, tetramer, GH2, glycosidase, hydrolase; 2.75A {Kluyveromyces lactis} PDB: 3ob8_A
Probab=39.15 E-value=11 Score=44.03 Aligned_cols=68 Identities=21% Similarity=0.152 Sum_probs=43.7
Q ss_pred cEEEEEEeCCCC-CCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeee
Q 010135 407 TWQIKFKLDHVD-RNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIE 485 (517)
Q Consensus 407 ~w~I~F~L~~~~-~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~ 485 (517)
-.+=.|.+++.. ......|++.- ......|.|||+.++ .-.|-+..++|+|+. .|+.
T Consensus 115 ~Yrr~f~vp~~~~~~~~v~L~F~g---v~~~a~V~vNG~~vG------------------~~~gg~~p~~~DIT~-~lk~ 172 (1032)
T 3oba_A 115 VYARTFELDSKSIESFEHRLRFEG---VDNCYELYVNGQYVG------------------FNKGSRNGAEFDIQK-YVSE 172 (1032)
T ss_dssp EEEEEEEECHHHHHHEEEEEEESC---EESEEEEEETTEEEE------------------EEECTTSCEEEECTT-TCCS
T ss_pred EEEEEEEECchhcCCCEEEEEECC---cceeEEEEECCEEEE------------------EEeCCcccEEEEChh-hccC
Confidence 345568886532 22233444432 235678999998552 112445678999986 6889
Q ss_pred eecEEEEEeec
Q 010135 486 GENTIFLKQPR 496 (517)
Q Consensus 486 G~NtI~l~~~~ 496 (517)
|+|+|.+.+.+
T Consensus 173 G~N~L~V~V~~ 183 (1032)
T 3oba_A 173 GENLVVVKVFK 183 (1032)
T ss_dssp EEEEEEEEEES
T ss_pred CcEEEEEEEEC
Confidence 99999999965
No 74
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=39.01 E-value=56 Score=27.08 Aligned_cols=43 Identities=12% Similarity=0.002 Sum_probs=24.3
Q ss_pred ceEEEeCCCcceEeCcccCcceEEEEEECceeeeeeeeeEEEEe
Q 010135 260 QFWTTADEDGCFSIKNIRTGNYNLYAWVPGFVGDYRSDALVTIT 303 (517)
Q Consensus 260 qywt~td~~G~Fti~nVrpGtY~L~a~~~G~~G~~~~~~~VtV~ 303 (517)
..++.+..-=.|+.... +|+|+|+|-+..-.|.......|+|+
T Consensus 43 ~vg~dt~apy~~~w~~~-~G~htl~a~AtD~~G~~~tS~~v~vt 85 (98)
T 3pe9_A 43 VIGSDREAPYEYEWKAV-EGNHEISVIAYDDDDAASTPDSVKIF 85 (98)
T ss_dssp EEEEECSSSEEEEEECC-SEEEEEEEEEEETTCCBCCCEEEEEE
T ss_pred EecccccCCEEEEEEcC-CccEEEEEEEEECCCCEEeeeEEEEE
Confidence 34444333335666767 89999999864333433333344444
No 75
>3uaf_A TTR-52; beta barrel/sandwich, cell engulfment, secreted, protein BIN; 2.01A {Caenorhabditis elegans}
Probab=37.55 E-value=36 Score=29.33 Aligned_cols=51 Identities=18% Similarity=0.141 Sum_probs=29.8
Q ss_pred CCeEEEEEEEEecCCCccccC--ceEEEecCCCCCCCccccccccceEEEeCCCcceEeC
Q 010135 217 ERGCVSGRLLVQDSNDVISAN--GAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIK 274 (517)
Q Consensus 217 ~RG~VsG~v~~~d~~~~~pa~--~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~ 274 (517)
|--.|+|++.=.. +|+. ++.|-|.+.... -.+....---+.||++|+|+|.
T Consensus 3 qsV~V~G~L~C~~----~Pa~~~~V~V~L~d~~~~---~~d~Ddll~~~~Td~~G~F~l~ 55 (117)
T 3uaf_A 3 SCLMATGVLKCPT----DPEAVKKVHIDLWDAAAA---AAESDDLMGRTWSDRNGNFQVT 55 (117)
T ss_dssp EEEEEEEEEECTT----CGGGGSSCEEEEEEHHHH---HTTSCCEEEEEECCTTSEEEEE
T ss_pred EEEEEEEEEEeCC----ccCCCCCEEEEEEecccc---cCCchHhheeeEECCCCEEEEE
Confidence 3457999998543 5654 788888531000 0001111223678999999986
No 76
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=37.24 E-value=11 Score=41.25 Aligned_cols=43 Identities=30% Similarity=0.472 Sum_probs=28.4
Q ss_pred CCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeeecEEEEE
Q 010135 433 TLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGENTIFLK 493 (517)
Q Consensus 433 ~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~NtI~l~ 493 (517)
.-+.=.|.|||..++. -+. +|- ..++| ||+.+|++|.|+|.+=
T Consensus 527 gwgKG~v~VNG~nLGR-YW~---~GP-----------Q~tLY---vP~~~Lk~G~NeIvvf 569 (595)
T 4e8d_A 527 EFGKGVAFVNGQNLGR-FWN---VGP-----------TLSLY---IPHSYLKEGANRIIIF 569 (595)
T ss_dssp TCCEEEEEETTEEEEE-EET---TCS-----------BCEEE---ECGGGSCSEEEEEEEE
T ss_pred CCceEEEEECCeeeec-ccC---CCC-----------eEEEE---ecHHHhCcCCceEEEE
Confidence 3466789999987752 221 110 12444 9999999999986643
No 77
>3hn5_A Putative exported protein BF0290; YP_210027.1, structural genomics, joint center for S genomics, JCSG; HET: MSE; 1.70A {Bacteroides fragilis nctc 9343}
Probab=34.07 E-value=1e+02 Score=29.35 Aligned_cols=60 Identities=18% Similarity=0.359 Sum_probs=41.1
Q ss_pred CeEEEEEEEEecCCC--ccccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcccCcceEEEEE
Q 010135 218 RGCVSGRLLVQDSND--VISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNIRTGNYNLYAW 286 (517)
Q Consensus 218 RG~VsG~v~~~d~~~--~~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nVrpGtY~L~a~ 286 (517)
-.+++|+|. -.|.. .....++-|-|.+.+ |.. .+.|.+ ....+|.|+ ..+=.|+|+|..-
T Consensus 10 ~a~l~G~iv-~tGE~i~~~~~~gv~i~l~E~g----y~~--~~~~~~-~v~qDGtf~-~~lF~G~Yki~~~ 71 (215)
T 3hn5_A 10 ESMLTGRVM-YNGEALQLRGNEAVQLQLYQHG----YAK--HDPINV-YVNQDGMYS-ANLFDGEYQMITK 71 (215)
T ss_dssp CEEEEEEEE-ETTEECCCCCTTSCEEEEESSC----GGG--CCCEEE-EBCTTSEEE-EEECSEEEEEEEC
T ss_pred CceEEEEEE-ECCCEeeecCCCceEEEEEEcc----cCC--CCCeeE-EEcCCCcEE-EEEECceeEEEEe
Confidence 478999998 34321 122334888887653 543 244554 378899999 7899999999984
No 78
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=33.72 E-value=41 Score=36.85 Aligned_cols=26 Identities=27% Similarity=0.620 Sum_probs=23.3
Q ss_pred EEEeCCCcceEeCcccCcceEEEEEE
Q 010135 262 WTTADEDGCFSIKNIRTGNYNLYAWV 287 (517)
Q Consensus 262 wt~td~~G~Fti~nVrpGtY~L~a~~ 287 (517)
|..+.....-++.|++||+|+|.|-+
T Consensus 731 W~~~~~~~~~~ytnL~pG~Y~f~V~a 756 (781)
T 3v9f_A 731 WYTINEQNSVTFRNIPPGKYEFLVKA 756 (781)
T ss_dssp EEEESSCSEEEECSCCSEEEEEEEEE
T ss_pred ccCcCCcceEEEcCCCCceEEEEEEE
Confidence 78888778899999999999999975
No 79
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A*
Probab=30.07 E-value=22 Score=38.63 Aligned_cols=66 Identities=20% Similarity=0.205 Sum_probs=42.0
Q ss_pred EEEEEEeCCC---CCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCee
Q 010135 408 WQIKFKLDHV---DRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFI 484 (517)
Q Consensus 408 w~I~F~L~~~---~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~ 484 (517)
.+-.|.+++. .......|++. +......|.|||+.++ .-.|-+..++++|+ ..|+
T Consensus 81 Yr~~f~~p~~~~~~~~~~~~L~f~---gv~~~a~V~vNG~~vg------------------~~~~g~~~~~~dit-~~l~ 138 (613)
T 3hn3_A 81 YEREVILPERWTQDLRTRVVLRIG---SAHSYAIVWVNGVDTL------------------EHEGGYLPFEADIS-NLVQ 138 (613)
T ss_dssp EEEEECCCHHHHHCTTEEEEEEES---CCCSEEEEEETTEEEE------------------EEESSSSCEEEECH-HHHC
T ss_pred EEEEEEeCchhhhcCCCEEEEEEC---CcceEEEEEECCEEEe------------------EEcCCcceEEEECh-hhhc
Confidence 4556887653 11223444443 2356788999998552 01244567899997 6888
Q ss_pred eee----cEEEEEee
Q 010135 485 EGE----NTIFLKQP 495 (517)
Q Consensus 485 ~G~----NtI~l~~~ 495 (517)
.|. |+|.+.+.
T Consensus 139 ~g~~~~~n~l~V~v~ 153 (613)
T 3hn3_A 139 VGPLPSRLRITIAIN 153 (613)
T ss_dssp CC---CCEEEEEEEE
T ss_pred CCCCCcceEEEEEEe
Confidence 886 99999885
No 80
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=29.76 E-value=38 Score=37.23 Aligned_cols=26 Identities=19% Similarity=0.419 Sum_probs=22.7
Q ss_pred EEEeCCCcceEeCcccCcceEEEEEE
Q 010135 262 WTTADEDGCFSIKNIRTGNYNLYAWV 287 (517)
Q Consensus 262 wt~td~~G~Fti~nVrpGtY~L~a~~ 287 (517)
|..+.....-+..|++||+|+|.|-+
T Consensus 737 W~~~~~~~~~~ytnL~pG~Y~f~V~a 762 (795)
T 4a2l_A 737 WYYLTDSRTVSYSNLPQGTYQFLVKA 762 (795)
T ss_dssp CEEESSCCEEEEECCCSEEEEEEEEE
T ss_pred ccCCCCcCeEEecccCCCeEEEEEEE
Confidence 77777777889999999999999976
No 81
>2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae}
Probab=28.55 E-value=90 Score=30.21 Aligned_cols=61 Identities=13% Similarity=0.125 Sum_probs=35.4
Q ss_pred CeEEEEEEEEecCCCccccCceE--EEecCCCCCCCccccccccceEEEeCCCcceEeCcc-cCcceEEEE
Q 010135 218 RGCVSGRLLVQDSNDVISANGAY--VGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNI-RTGNYNLYA 285 (517)
Q Consensus 218 RG~VsG~v~~~d~~~~~pa~~a~--V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nV-rpGtY~L~a 285 (517)
.|.|.-+=.-.|+....+..+|. .-|...... .|. ...+.++++|.|+|..+ .+|+|.|.=
T Consensus 156 ~~~~~~~K~d~~~~~~~~L~GA~~~F~l~~~~~~-~~~------~~~~~t~~~g~~~~~gLd~~g~Y~l~E 219 (262)
T 2x9z_A 156 NGDLTLTKTWVDATGAPIPAGAEATFDLVNAQAG-KVV------QTVTLTTDKNTVTVNGLDKNTEYKFVE 219 (262)
T ss_dssp TSCEEEEEEEECTTSCBCCCCSCEEEEEEETTTC-CEE------EEEEECTTCSEEEECSCCTTSCEEEEE
T ss_pred cccEEEEEEcCCCCcccCcCCcEEEEEEEECCCC-cEE------EEEEecCCceEEEEeCCCCCCCEEEEE
Confidence 35555332222332223566644 777643211 121 22333799999999999 799999874
No 82
>1b4r_A Protein (PKD1_human); PKD domain 1 from human polycystein-1, polycystin (precursor), membrane protein; NMR {Homo sapiens} SCOP: b.1.3.1
Probab=28.50 E-value=50 Score=26.46 Aligned_cols=27 Identities=22% Similarity=0.331 Sum_probs=15.2
Q ss_pred ccCcceEEEEEEC-ceeeeeeeeeEEEEe
Q 010135 276 IRTGNYNLYAWVP-GFVGDYRSDALVTIT 303 (517)
Q Consensus 276 VrpGtY~L~a~~~-G~~G~~~~~~~VtV~ 303 (517)
-+||+|++.+-+. |. +.-.....|+|+
T Consensus 52 ~~~G~YtV~Ltv~~g~-~~~~a~~~V~V~ 79 (80)
T 1b4r_A 52 VLPGRYHVTAVLALGA-GSALLGTDVQVE 79 (80)
T ss_dssp CSSEEEEEEEEEECSS-CEEEEEEEEEEB
T ss_pred CCCcEEEEEEEEEeCC-ceEEEEEEEEEE
Confidence 3789998877653 21 222334456665
No 83
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=28.06 E-value=46 Score=36.32 Aligned_cols=26 Identities=23% Similarity=0.376 Sum_probs=20.9
Q ss_pred EEEeCC-CcceEeCcccCcceEEEEEE
Q 010135 262 WTTADE-DGCFSIKNIRTGNYNLYAWV 287 (517)
Q Consensus 262 wt~td~-~G~Fti~nVrpGtY~L~a~~ 287 (517)
|..++. ...-++.|++||+|+|.|-+
T Consensus 702 W~~~~~~~~~~~ytnL~pG~Y~f~V~a 728 (758)
T 3ott_A 702 WNFLKSNINRITYSNLSYGNYQLIISK 728 (758)
T ss_dssp CEECCTTCCEEEECSCCSEEEEEEEEE
T ss_pred ccCCCCCcceEEecCCCCccEEEEEEE
Confidence 666653 45688999999999999986
No 84
>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}
Probab=27.16 E-value=3.3e+02 Score=26.48 Aligned_cols=63 Identities=21% Similarity=0.280 Sum_probs=42.2
Q ss_pred CeEEEEEEEEec-CCCc---cccCceEEEecCCCCCCCccccccccc-eEEEeCCCcceEeCcccCcceEEEEE
Q 010135 218 RGCVSGRLLVQD-SNDV---ISANGAYVGLAPPGDVGSWQTECKDYQ-FWTTADEDGCFSIKNIRTGNYNLYAW 286 (517)
Q Consensus 218 RG~VsG~v~~~d-~~~~---~pa~~a~V~L~~~~~~g~~~~~~~~yq-ywt~td~~G~Fti~nVrpGtY~L~a~ 286 (517)
-++++|+|.-.. |... ....++.|-|.+.+ |.. +.+.| .+ ....+|.|+=..+=.|+|+|..-
T Consensus 9 ~s~l~G~ivd~~tGE~i~~~~g~~gv~i~l~E~g----~~~-~~~~~~~~-~v~~DGtf~Nt~lF~G~Yki~~~ 76 (249)
T 4eiu_A 9 SETIWGEVVDEATGKRVLTDQGSEGIRVRLTELS----WGD-NVQHNPDF-YCMMDGTFQNTKIFKGEYNVRID 76 (249)
T ss_dssp CEEEEEEEEETTTCCBCCCCSSTTSCEEEEEECC----SSC-CBCCSCCE-ECCTTSEEEEEEECSEEEEEEEE
T ss_pred cceeEEEEEECCCCCEeeeccCCCceEEEEEecc----ccc-CCCccCCE-EECCCCceeeeeEEcceeEEEeC
Confidence 478999998743 2211 11235788886652 543 22444 44 47889999977799999999985
No 85
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=26.29 E-value=23 Score=37.25 Aligned_cols=44 Identities=25% Similarity=0.348 Sum_probs=30.0
Q ss_pred EEeCCCcceEeCcccCcceEEEEEE--CceeeeeeeeeEEEEeCCce
Q 010135 263 TTADEDGCFSIKNIRTGNYNLYAWV--PGFVGDYRSDALVTITSGSN 307 (517)
Q Consensus 263 t~td~~G~Fti~nVrpGtY~L~a~~--~G~~G~~~~~~~VtV~aG~t 307 (517)
..+|++|.|.|.++++|+|.|.=-. .|+.- ....-.++|.+++.
T Consensus 372 ~~td~~G~~~~~~L~~G~Y~l~EtkAP~GY~l-~~~~~~f~i~~~~~ 417 (444)
T 2x9x_A 372 LVSDAQGRFEITGLLAGTYYLEETKQPAGYAL-LTSRQKFEVTATSY 417 (444)
T ss_dssp EECCTTCEEEEEEECSEEEEEEEEECCTTSCC-CCSCEEEEECTTTT
T ss_pred EEECCCCeEEECCCCCceEEEEEeeCCCCccc-CCCcEEEEEeCCcc
Confidence 4689999999999999999998663 33220 01123567776654
No 86
>3cih_A Putative alpha-rhamnosidase; structural genomics, protein structure initiative II, NYSGXRC, (alpha/alpha)6 barrel domain; 2.33A {Bacteroides thetaiotaomicron vpi-5482}
Probab=26.10 E-value=78 Score=35.15 Aligned_cols=54 Identities=11% Similarity=0.119 Sum_probs=37.1
Q ss_pred EEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeeeee
Q 010135 408 WQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIEGE 487 (517)
Q Consensus 408 w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~G~ 487 (517)
.+=.|.|++ .++|.|. +-+..++.|||+.++. ++.- + +|++|+
T Consensus 61 ~rk~f~~~~-----~a~l~i~----a~G~ye~~iNG~~vg~--------------y~~r------~--------~L~~G~ 103 (739)
T 3cih_A 61 FSKVLNLSE-----PEEVFIA----AEGTYNVKLDGKLQFG--------------MPET------L--------LLPAGK 103 (739)
T ss_dssp EEEEEEESS-----CEEEEEE----EESEEEEEETTEECSS--------------CCSE------E--------EECSEE
T ss_pred EEEEEEcCC-----CcEEEEE----EcCcEEEEECCEEccC--------------CCCc------e--------EecCCc
Confidence 344588854 1566665 5689999999997741 1111 1 388999
Q ss_pred cEEEEEeecCC
Q 010135 488 NTIFLKQPRCT 498 (517)
Q Consensus 488 NtI~l~~~~g~ 498 (517)
|+|-+.+-.|.
T Consensus 104 N~i~v~lg~g~ 114 (739)
T 3cih_A 104 HSLNIKVWNQA 114 (739)
T ss_dssp EEEEEEEECSS
T ss_pred eEEEEEEEeCC
Confidence 99999987764
No 87
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=25.98 E-value=63 Score=28.00 Aligned_cols=15 Identities=20% Similarity=0.310 Sum_probs=13.4
Q ss_pred cccCcceEEEEEECc
Q 010135 275 NIRTGNYNLYAWVPG 289 (517)
Q Consensus 275 nVrpGtY~L~a~~~G 289 (517)
.++||+|+|.|+..|
T Consensus 89 ~~~pG~Ytl~a~l~~ 103 (120)
T 3isy_A 89 VPEPGTYEVKVTFKG 103 (120)
T ss_dssp CCCSEEEEEEEEECC
T ss_pred CCCCccEEEEEEEEe
Confidence 689999999999866
No 88
>2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae}
Probab=25.84 E-value=24 Score=37.31 Aligned_cols=45 Identities=20% Similarity=0.388 Sum_probs=30.6
Q ss_pred EEeCCCcceEeCcccCcceEEEEEE--CceeeeeeeeeEEEEeCCcee
Q 010135 263 TTADEDGCFSIKNIRTGNYNLYAWV--PGFVGDYRSDALVTITSGSNI 308 (517)
Q Consensus 263 t~td~~G~Fti~nVrpGtY~L~a~~--~G~~G~~~~~~~VtV~aG~t~ 308 (517)
-.+|++|.|.|.++.+|+|.|.=-. .|+.- ......++|.+++..
T Consensus 378 ~ttd~~G~~~~~~L~~G~Y~l~EtkAP~GY~l-~~~~~~f~i~~~~~~ 424 (452)
T 2xtl_A 378 LISNDKGQFEITGLTEGQYSLEETQAPTGYAK-LSGDVSFNVNATSYS 424 (452)
T ss_dssp EECCTTSEEEEEEECSEEEEEEEEECCTTBCC-CSSCEEEEECTTTTT
T ss_pred EEeCCCCeEEECCCCCceEEEEEeeCCCCccc-CCCCEEEEEeCCccc
Confidence 3589999999999999999998663 23220 011235777776553
No 89
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=24.65 E-value=43 Score=29.81 Aligned_cols=49 Identities=14% Similarity=0.145 Sum_probs=30.3
Q ss_pred EEEEEEecCCCccccCceEEEecCCCCCCCccccccccce----EEEeC-CC---cceEeCcccCcceE
Q 010135 222 SGRLLVQDSNDVISANGAYVGLAPPGDVGSWQTECKDYQF----WTTAD-ED---GCFSIKNIRTGNYN 282 (517)
Q Consensus 222 sG~v~~~d~~~~~pa~~a~V~L~~~~~~g~~~~~~~~yqy----wt~td-~~---G~Fti~nVrpGtY~ 282 (517)
+|+++...+ -..+.++.|.. |...+...|. |.-++ .+ |.|+|.|+ |+|-
T Consensus 15 sgk~lDv~~--~sta~Gt~V~~--------w~~~g~~nQ~~~~~W~~~~~~~~~~g~y~i~n~--G~~L 71 (148)
T 3nbc_A 15 TNRLIDLTG--SNPAENTLIIG--------HHLNKTPSGYGNQQWTLVQLPHTTIYTMQAVNP--QSYV 71 (148)
T ss_dssp TTCEEEEGG--GCCSTTEEEEE--------ECCCSTTTCCGGGCEEEEECTTSSEEEEEESSS--CCEE
T ss_pred CCCeEECCC--CcCCCCcEEEE--------eCCCCChhheeecEEEEEECCCcccceEEEEEC--CcEE
Confidence 455554332 13456777776 3333445566 98776 46 99999999 8754
No 90
>2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A
Probab=23.84 E-value=1.2e+02 Score=31.70 Aligned_cols=62 Identities=13% Similarity=0.151 Sum_probs=39.2
Q ss_pred CeEEEEEEEEecCCCc--cccCceEEEecCCCCCCCccccccccceEEEeCCCcceEeCcc-cCcceEEEEE
Q 010135 218 RGCVSGRLLVQDSNDV--ISANGAYVGLAPPGDVGSWQTECKDYQFWTTADEDGCFSIKNI-RTGNYNLYAW 286 (517)
Q Consensus 218 RG~VsG~v~~~d~~~~--~pa~~a~V~L~~~~~~g~~~~~~~~yqywt~td~~G~Fti~nV-rpGtY~L~a~ 286 (517)
.|+|+=+=...|+... ..+.+|...|..... |.| .+.-..+|++|.++|.++ +||+|+|.=-
T Consensus 159 ~G~i~i~K~d~~g~~l~~~~g~~A~F~L~~~~~-~~~------v~~~~ttd~~G~~~~~~L~~~G~Y~v~Et 223 (444)
T 2x9x_A 159 NGDLTLTKTWVDATGAPIPAGAEATFDLVNAQA-GKV------VQTVTLTTDKNTVTVNGLDKNTEYKFVER 223 (444)
T ss_dssp TSCEEEEEEEECTTSCBCCCCSCEEEEEEETTT-CCE------EEEEEECTTCCEEEECSCCTTSCEEEEEC
T ss_pred cceEEEEEecCCCCCcccccCCceEEEEEECCC-CcE------EEEEEEeCCCceEEEcCCCCCCcEEEEEE
Confidence 5666665444554211 133457778865321 111 233456899999999999 9999999853
No 91
>3bwu_D FIMD, outer membrane usher protein FIMD, N-terminal DOM; usher, N-terminal domain, ternary complex with chaperone and subunit, chaperone, structural protein, mebrane protein; 1.76A {Escherichia coli} SCOP: b.167.1.1 PDB: 1ze3_D 1zdx_A
Probab=22.41 E-value=82 Score=26.74 Aligned_cols=15 Identities=13% Similarity=0.483 Sum_probs=13.5
Q ss_pred cccCcceEEEEEECc
Q 010135 275 NIRTGNYNLYAWVPG 289 (517)
Q Consensus 275 nVrpGtY~L~a~~~G 289 (517)
.+.||+|.+.+|++|
T Consensus 27 ~~~PG~Y~vdI~vN~ 41 (125)
T 3bwu_D 27 ELPPGTYRVDIYLNN 41 (125)
T ss_dssp SSCSEEEEEEEEETT
T ss_pred CcCCcEEEEEEEECC
Confidence 478999999999987
No 92
>3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii}
Probab=21.53 E-value=70 Score=31.61 Aligned_cols=87 Identities=21% Similarity=0.275 Sum_probs=45.1
Q ss_pred EEEEEEEEec--CCC----ccccCceEEEecCCCCC--CCcccccc-------ccceEEEeCCCcceEeCcc--------
Q 010135 220 CVSGRLLVQD--SND----VISANGAYVGLAPPGDV--GSWQTECK-------DYQFWTTADEDGCFSIKNI-------- 276 (517)
Q Consensus 220 ~VsG~v~~~d--~~~----~~pa~~a~V~L~~~~~~--g~~~~~~~-------~yqywt~td~~G~Fti~nV-------- 276 (517)
+-.|.|.+.. ... ..+..+|..-|....+. +.|..+.+ +..- -.||++|.|+|.++
T Consensus 156 ~~~g~i~i~KvD~~~~~~~~~~L~GA~F~L~~~~~~~~~~~~~~~~g~~i~~~~~~~-~tTd~~G~~~~~gL~~~d~~~~ 234 (290)
T 3qdh_A 156 SRWGDLLIKKVDNHQQGQDKAGLQGAQFQLYKAKNAYAGTCTKDKEGDPIAINGETT-LTTDAQGAINVKGLFISDSIDG 234 (290)
T ss_dssp EEEEEEEEEEC----------CCTTCEEEEEEESSTTCSSCCSCEESSCCCBTTBSS-EECCTTSEEEEEEEEEEESCCC
T ss_pred EEEeeEEEEEECCCCCcccCcccCCCEEEEEECCCcccceeeccccCceEecCCceE-EEECCCCEEEEeCccccccccc
Confidence 3358666554 323 36788888888643211 11111000 1112 25899999999999
Q ss_pred ---------cCcceEEEEEE--Cceeeeeee-----eeEEEEeCCceeee
Q 010135 277 ---------RTGNYNLYAWV--PGFVGDYRS-----DALVTITSGSNIKM 310 (517)
Q Consensus 277 ---------rpGtY~L~a~~--~G~~G~~~~-----~~~VtV~aG~t~~l 310 (517)
.+|+|.|.=-. .|+. .. ...|+|++|++...
T Consensus 235 ~~~~~~~~~~~~~Y~l~EtkAP~GY~---l~~~~~~~~~~~v~~~~~~~~ 281 (290)
T 3qdh_A 235 ANRDNQKDATARCYVLVETKAPAGYV---LPAGDGAVTPVKIEVGAVTTD 281 (290)
T ss_dssp TTSSCCTTCSEEEEEEEEEECCTTBC---CCCGGGGEEEEEEEC------
T ss_pred ccccccccCCCceEEEEEccCCCCeE---cCcCcCCceeEEEECCCCccE
Confidence 57999988653 3322 21 34699999876543
No 93
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=21.40 E-value=1e+02 Score=35.77 Aligned_cols=69 Identities=7% Similarity=-0.025 Sum_probs=41.3
Q ss_pred cEEEEEEeCCCCCCCcEEEEEEEeccCCCeEEEEEcCCCCCCCcccccccCCCCceecceeeeeeEEEEEEeeCCCeee-
Q 010135 407 TWQIKFKLDHVDRNSSYKLRVAIASATLAELQVRVNDPNANRPLFTTGLIGRDNAIARHGIHGLYLLYHVNIPGTRFIE- 485 (517)
Q Consensus 407 ~w~I~F~L~~~~~~~~~tLriala~a~~~~~~V~vN~~~~~~~~~~~~~~~~~~~i~R~~~~G~~~~~~~~ipa~~L~~- 485 (517)
-++=.|+++.. ..+|.|.+.+.......|.|||+-++ .-..+.+ -....+.|+| ..|+.
T Consensus 692 wYR~~F~~~~~----~~~L~~~~~gG~~~~~~VwvNG~~lG-------s~~g~~~-------~~~~~~~~~l--~~L~~g 751 (971)
T 1tg7_A 692 LFRGHFTANGK----EKTFFVQTKGGTAYGHSIWINETYVG-------SWAGTSI-------NDNNNATYTL--PTLQSG 751 (971)
T ss_dssp EEEEEEECCSC----CCEEEEEEECSTTCCEEEEETTEEEE-------EECCCTT-------CSEEEEEEEC--CCCCTT
T ss_pred EEEEEEECCCc----ceEEEEEecCcccceEEEEECCEEEe-------eeecCCC-------cccCceEEEE--eEecCC
Confidence 34555665432 23677776666778899999998553 1111110 0012456666 57887
Q ss_pred eecEEEEEee
Q 010135 486 GENTIFLKQP 495 (517)
Q Consensus 486 G~NtI~l~~~ 495 (517)
|.|+|++-+.
T Consensus 752 g~NvI~Vlvd 761 (971)
T 1tg7_A 752 KNYVITVVID 761 (971)
T ss_dssp CEEEEEEEEC
T ss_pred CceEEEEEEe
Confidence 6899999774
No 94
>4b0m_A F1 capsule-anchoring protein; protein transport, chaperone-usher pathway, PILI assembly; 1.80A {Yersinia pestis} PDB: 4b0e_A
Probab=21.36 E-value=50 Score=28.92 Aligned_cols=19 Identities=32% Similarity=0.461 Sum_probs=15.2
Q ss_pred eEeCcccCcceEEEEEECc
Q 010135 271 FSIKNIRTGNYNLYAWVPG 289 (517)
Q Consensus 271 Fti~nVrpGtY~L~a~~~G 289 (517)
|+-.++.||+|.+-+|++|
T Consensus 22 F~~g~~~PG~Y~vdI~vN~ 40 (136)
T 4b0m_A 22 FNQGLQLPGNYFVNVFVNG 40 (136)
T ss_dssp HHTTCCCCEEEEEEEEETT
T ss_pred hcCCCCCCcEEEEEEEECC
Confidence 4334577999999999987
No 95
>3t04_D Monobody 7C12; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 2.10A {Homo sapiens}
Probab=20.91 E-value=55 Score=26.16 Aligned_cols=37 Identities=14% Similarity=0.209 Sum_probs=24.8
Q ss_pred CCcceEeCcccCcc-eEEEEEECce--eeeeeeeeEEEEeC
Q 010135 267 EDGCFSIKNIRTGN-YNLYAWVPGF--VGDYRSDALVTITS 304 (517)
Q Consensus 267 ~~G~Fti~nVrpGt-Y~L~a~~~G~--~G~~~~~~~VtV~a 304 (517)
..-.++|.+.+||+ |.+.+.+.-. .|.-. ...|+|++
T Consensus 62 ~~ts~~l~~L~p~t~Y~~~V~A~~~~~~G~~~-S~p~~~~~ 101 (103)
T 3t04_D 62 YYSTATISGLKPGVDYTITVYAYDTFFPGYEP-NSPISINY 101 (103)
T ss_dssp TCCEEEECSCCTTCCEEEEEEEESCCCTTCCC-SCCEEEEE
T ss_pred CcCEEEeCCCCCCCEEEEEEEEEeCCCCCCCC-CCCEEEee
Confidence 45679999999999 9999986322 34333 23466653
No 96
>4d8m_A Pesticidal crystal protein CRY5BA; glycolipid binding, lipid binding protein; 2.30A {Bacillus thuringiensis}
Probab=20.79 E-value=4.5e+02 Score=28.65 Aligned_cols=95 Identities=17% Similarity=0.297 Sum_probs=49.6
Q ss_pred ccEEEEEEeCCCCCCCcEEEEEEEeccCCCeE--EEEEcCCCCCCCcccccccCCC--CceecceeeeeeEEEEEEeeCC
Q 010135 406 TTWQIKFKLDHVDRNSSYKLRVAIASATLAEL--QVRVNDPNANRPLFTTGLIGRD--NAIARHGIHGLYLLYHVNIPGT 481 (517)
Q Consensus 406 ~~w~I~F~L~~~~~~~~~tLriala~a~~~~~--~V~vN~~~~~~~~~~~~~~~~~--~~i~R~~~~G~~~~~~~~ipa~ 481 (517)
.++.+.|.- +.++.|++||-.|+.....+ .|.++|. ++.....++.+ +...--|-.|+|.+.. .+.-
T Consensus 486 q~l~~~i~n---~~~~~Y~VR~RYAS~~d~~~~~~~~~~~~----~i~n~~~fp~T~~~~~~v~G~nG~y~~~~--~~~~ 556 (587)
T 4d8m_A 486 QSVGIQITN---QTKQKYEIRCRYASKGDNNVYFNVDLSEN----PFRNSISFGSTESSVVGVQGENGKYILKS--ITTV 556 (587)
T ss_dssp CEEEEEEEE---CSCEEEEEEEEEEESSCEEEEEEECCSSS----CEEEEEEECCCTTCSSSEECSSSEEEEEE--EEEE
T ss_pred CEEEEEEEc---cccceEEEEEEEecCCCceEEEEEcCCCc----eeeccCCCCccccccccccccCCceEeec--CCce
Confidence 466666664 33567999999998766553 3444443 22111223322 2112222235554433 2333
Q ss_pred CeeeeecEEEEEeecCCCCCceEEEEEEEEec
Q 010135 482 RFIEGENTIFLKQPRCTSPFQGIMYDYIRLEG 513 (517)
Q Consensus 482 ~L~~G~NtI~l~~~~g~s~~~~vmyD~I~Le~ 513 (517)
.|-.|.=+|.|+..+++ .+.-|-|++.-
T Consensus 557 ~~p~g~~t~~i~nn~~~----~~~iDRIEFiP 584 (587)
T 4d8m_A 557 EIPAGSFYVHITNQGSS----DLFLDRIEFVP 584 (587)
T ss_dssp EECSEEEEEEEEECSSS----CEEEEEEEEEE
T ss_pred EecCCcEEEEEEecCCC----CEEEEEEEeee
Confidence 34456645555542232 67899999873
Done!