Query 010138
Match_columns 517
No_of_seqs 358 out of 1641
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 20:43:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010138.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010138hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1tx4_A P50-rhogap; complex (GT 100.0 8.4E-40 2.9E-44 312.6 15.8 187 168-356 3-198 (198)
2 1ow3_A RHO-GTPase-activating p 100.0 5.7E-39 1.9E-43 316.5 15.8 191 167-359 38-237 (242)
3 3msx_B RHO GTPase-activating p 100.0 7.8E-39 2.7E-43 306.0 14.4 184 167-356 6-201 (201)
4 1pbw_A Rhogap domain, phosphat 100.0 2E-39 7E-44 314.3 9.0 195 170-373 4-211 (216)
5 2osa_A N-chimaerin; RHO-GAP, G 100.0 2.7E-38 9.3E-43 303.0 13.7 183 170-356 5-202 (202)
6 3byi_A RHO GTPase activating p 100.0 1.6E-38 5.4E-43 307.2 11.5 185 170-358 16-213 (214)
7 3iug_A RHO/CDC42/RAC GTPase-ac 100.0 2.2E-38 7.5E-43 309.3 11.5 186 170-360 18-223 (229)
8 3fk2_A Glucocorticoid receptor 100.0 6.1E-38 2.1E-42 309.8 14.8 183 170-357 50-244 (246)
9 2ee4_A RHO GTPase activating p 100.0 3.9E-38 1.3E-42 303.4 11.5 183 170-357 9-203 (209)
10 3kuq_A RHO GTPase-activating p 100.0 1.2E-36 4.1E-41 297.2 13.4 158 169-330 16-183 (228)
11 3eap_A RHO GTPase-activating p 100.0 1E-36 3.5E-41 305.3 12.2 185 170-356 61-257 (271)
12 1f7c_A Rhogap protein; GTPase 100.0 9.2E-37 3.2E-41 298.6 10.7 187 171-359 16-219 (231)
13 2ovj_A Mgcracgap, RAC GTPase-a 100.0 3.2E-35 1.1E-39 281.9 18.4 178 177-359 5-197 (201)
14 2xs6_A Phosphatidylinositol 3- 100.0 9.4E-37 3.2E-41 296.4 1.2 178 170-355 19-210 (214)
15 3cxl_A N-chimerin; SH2, RHO-GA 100.0 3E-34 1E-38 306.5 11.9 183 170-356 266-463 (463)
16 3qis_A Inositol polyphosphate 100.0 8.6E-34 3E-38 295.2 12.9 143 189-332 196-340 (366)
17 2odb_B Serine/threonine-protei 80.2 0.45 1.6E-05 33.0 0.6 28 130-157 1-29 (35)
18 2qme_I CRIB domain of the seri 78.2 0.56 1.9E-05 32.8 0.6 29 130-158 1-30 (36)
19 2ov2_I Serine/threonine-protei 55.8 3.5 0.00012 28.4 0.9 30 130-159 1-31 (35)
20 1f3m_A Serine/threonine-protei 53.5 3.4 0.00011 33.9 0.5 30 128-157 3-33 (80)
21 1cee_B Wiskott-aldrich syndrom 34.5 19 0.00064 27.6 2.0 27 126-152 4-30 (59)
22 2p4p_A Hypothetical protein HD 20.8 95 0.0033 24.7 4.0 48 211-259 7-54 (86)
No 1
>1tx4_A P50-rhogap; complex (GTPase activation/proto-oncogene), GTPase, transition state, GAP; HET: GDP; 1.65A {Homo sapiens} SCOP: a.116.1.1 PDB: 1am4_A* 1grn_B*
Probab=100.00 E-value=8.4e-40 Score=312.57 Aligned_cols=187 Identities=25% Similarity=0.313 Sum_probs=166.1
Q ss_pred CCCCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCCCC---CCchhh
Q 010138 168 SASVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVVPH---GIDVHC 244 (517)
Q Consensus 168 ~~~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~~~---~~D~h~ 244 (517)
+.+.++||++|+++... ......||.+|.+|++|| +++|+++|||||++|+..++++|++.+|+|...+ ..|+|+
T Consensus 3 ~~~~~vFG~~L~~~~~~-~~~~~~vP~iv~~~i~~l-~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~d~~~ 80 (198)
T 1tx4_A 3 PLPNQQFGVSLQHLQEK-NPEQEPIPIVLRETVAYL-QAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNALHL 80 (198)
T ss_dssp CCTTCCTTSCHHHHHHH-STTCCSSCHHHHHHHHHH-HHHCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCGGGSSCTHH
T ss_pred CCCCCccCCcHHHHHhh-CCCCCCCCHHHHHHHHHH-HHhCCCCCCeeecCCcHHHHHHHHHHHhCCCCCCccccccchH
Confidence 44678999999998543 322358999999999998 6899999999999999999999999999987543 358999
Q ss_pred hHHHHHHHHHhCCCCCCCCCChHHHhhcc------cHHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhhH
Q 010138 245 LAGLIKAWLRELPTGVLDSLTPDQVMHCN------TEEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNIA 318 (517)
Q Consensus 245 VAsLLK~fLReLPePLlp~~ly~~~i~~~------~~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NLA 318 (517)
+|++||.|||+||+||||.++|+.|+++. +.+.++.++.+||+.|+.+|+||+.||++|+++++.|||++.|||
T Consensus 81 ~a~lLK~flreLpePLi~~~l~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nLa 160 (198)
T 1tx4_A 81 PAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNLA 160 (198)
T ss_dssp HHHHHHHHHHHSSSCTTCGGGHHHHHTGGGSCGGGHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHHHHHHHCCCcCCCHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHH
Confidence 99999999999999999999999999863 346789999999999999999999999999999999999999999
Q ss_pred HhhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhh
Q 010138 319 MVFAPNMTQMADPLTALIHAVQVMNFLKTLILKILRER 356 (517)
Q Consensus 319 iVFaPnLlr~~d~~~~l~~~~~~~~~v~~LIen~l~~f 356 (517)
+||||+|+++++....+........+++.||+|+-+.|
T Consensus 161 ~vf~P~Ll~~~~~~~~~~~~~~~~~~v~~LI~~~~~iF 198 (198)
T 1tx4_A 161 VVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELF 198 (198)
T ss_dssp HHHHHHHCCCSSHHHHHHTHHHHHHHHHHHHHTHHHHC
T ss_pred hhhcccccCCCCccccHHHHHHHHHHHHHHHHhHHHhC
Confidence 99999999999877777777788899999999887654
No 2
>1ow3_A RHO-GTPase-activating protein 1; complex, GTPase, GAP, transition state, gene regulation/signaling protein complex; HET: GDP; 1.80A {Homo sapiens} SCOP: a.116.1.1 PDB: 1rgp_A 2ngr_B*
Probab=100.00 E-value=5.7e-39 Score=316.51 Aligned_cols=191 Identities=25% Similarity=0.325 Sum_probs=168.3
Q ss_pred CCCCCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCCCC---CCchh
Q 010138 167 PSASVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVVPH---GIDVH 243 (517)
Q Consensus 167 p~~~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~~~---~~D~h 243 (517)
+..+.++||++|+++... ......||.+|.+|++|| +++|+++|||||++|+..++++|++.||+|...+ ..|+|
T Consensus 38 ~~~~~~vFG~~L~~~~~~-~~~~~~vP~iv~~~i~~l-~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~dv~ 115 (242)
T 1ow3_A 38 PPLPNQQFGVSLQHLQEK-NPEQEPIPIVLRETVAYL-QAHALTTEGIFRRSANTQVVREVQQKYNMGLPVDFDQYNELH 115 (242)
T ss_dssp -CCTTCCSSSCHHHHHHH-STTCCSSCHHHHHHHHHH-HHHCTTCTTTTTSCCCHHHHHHHHHHHHTTCCCCGGGSSCTH
T ss_pred CCCCCCccCCcHHHHHhh-cCCCCCCCHHHHHHHHHH-HHcCCCCCceeeeCCcHHHHHHHHHHHhcCCCCCcccccchH
Confidence 445678999999988543 333458999999999998 6899999999999999999999999999987543 35999
Q ss_pred hhHHHHHHHHHhCCCCCCCCCChHHHhhcc------cHHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhh
Q 010138 244 CLAGLIKAWLRELPTGVLDSLTPDQVMHCN------TEEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNI 317 (517)
Q Consensus 244 ~VAsLLK~fLReLPePLlp~~ly~~~i~~~------~~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NL 317 (517)
++|++||.|||+||+||||.++|+.|+++. +.+.++.++.+||+.|+.+|+||+.||++|+++++.|||++.||
T Consensus 116 ~va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NL 195 (242)
T 1ow3_A 116 LPAVILKTFLRELPEPLLTFDLYPHVVGFLNIDESQRVPATLQVLQTLPEENYQVLRFLTAFLVQISAHSDQNKMTNTNL 195 (242)
T ss_dssp HHHHHHHHHHHHSSSCTTCGGGHHHHHTGGGSCGGGHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCcCCCCHHHh
Confidence 999999999999999999999999999863 34678999999999999999999999999999999999999999
Q ss_pred HHhhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 010138 318 AMVFAPNMTQMADPLTALIHAVQVMNFLKTLILKILREREEA 359 (517)
Q Consensus 318 AiVFaPnLlr~~d~~~~l~~~~~~~~~v~~LIen~l~~fee~ 359 (517)
|+||||+|+++++....+.+......+++.||+|+-+.|.+.
T Consensus 196 Aivf~P~Ll~~~~~~~~~~~~~~~~~~v~~LI~~~~~iF~~~ 237 (242)
T 1ow3_A 196 AVVFGPNLLWAKDAAITLKAINPINTFTKFLLDHQGELFPSP 237 (242)
T ss_dssp HHHHHHHHCCCSSHHHHHHTHHHHHHHHHHHHHTHHHHC---
T ss_pred HHhhcchhCCCCCccccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 999999999999877777777788899999999998888654
No 3
>3msx_B RHO GTPase-activating protein 20; protein-proten complex, transition state, protein BI; HET: GDP; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.8e-39 Score=306.02 Aligned_cols=184 Identities=23% Similarity=0.340 Sum_probs=157.7
Q ss_pred CCCCCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCC--CCCCchhh
Q 010138 167 PSASVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVV--PHGIDVHC 244 (517)
Q Consensus 167 p~~~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~--~~~~D~h~ 244 (517)
++.++++||++|+++... ..||.+|.+|++|| +++|+++|||||++|+..++++|++.++.|.. .+..|+|+
T Consensus 6 ~~~~~~vFG~~L~~~~~~-----~~vP~~v~~~i~~l-~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~d~~~ 79 (201)
T 3msx_B 6 SPMPGQLFGISLPNICEN-----DNLPKPVLDMLFFL-NQKGPLTKGIFRQSANVKSCRELKEKLNSGVEVHLDCESIFV 79 (201)
T ss_dssp ----CCCTTSCHHHHSGG-----GCCCHHHHHHHHHH-HHHGGGSTTTTTSCCCHHHHHHHHHHHHHTCCCCTTSSCHHH
T ss_pred CCCCCCeeCCcHHHHhcC-----CCCCHHHHHHHHHH-HHhCCCCCCeeeeCCCHHHHHHHHHHhccCCCCCCCcccHHH
Confidence 344678999999997532 34999999999998 78999999999999999999999999999864 35789999
Q ss_pred hHHHHHHHHHhCCCCCCCCCChHHHhhccc-------HHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhh
Q 010138 245 LAGLIKAWLRELPTGVLDSLTPDQVMHCNT-------EEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNI 317 (517)
Q Consensus 245 VAsLLK~fLReLPePLlp~~ly~~~i~~~~-------~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NL 317 (517)
||++||.|||+||+||||.++|+.|+++.+ .+.++.++.+||+.|+.+|+||+.||++|+++++.|||+++||
T Consensus 80 va~lLK~flreLp~pLl~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~nL 159 (201)
T 3msx_B 80 IASVLKDFLRNIPGSIFSSDLYDHWVSVMDQGNDEEKINTVQRLLDQLPRANVVLLRYLFGVLHNIEQHSSSNQMTAFNL 159 (201)
T ss_dssp HHHHHHHHHHTSTTTTTTGGGHHHHHHGGGSSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHccccHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccccCCCChhhh
Confidence 999999999999999999999999998742 3468889999999999999999999999999999999999999
Q ss_pred HHhhhcccCCCCChh---HHHHHHHHHHHHHHHHHHHHHHhh
Q 010138 318 AMVFAPNMTQMADPL---TALIHAVQVMNFLKTLILKILRER 356 (517)
Q Consensus 318 AiVFaPnLlr~~d~~---~~l~~~~~~~~~v~~LIen~l~~f 356 (517)
|+||||+|+|+++.. .......++..+++.||+|+-++|
T Consensus 160 a~vf~P~ll~~~~~~~~~~~~~~~~~~~~iv~~LI~~~~~IF 201 (201)
T 3msx_B 160 AVCVAPSILWPPASSSPELENEFTKKVSLLIQFLIENCLRIF 201 (201)
T ss_dssp HHHHHHHHCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhhccccCCCCCCChHHHHHHHHHHHHHHHHHHHhhHhhC
Confidence 999999999987642 222234555667999999987765
No 4
>1pbw_A Rhogap domain, phosphatidylinositol 3-kinase; phosphotransferase, tpase activating protein, CDC42, phosphoinositide 3-kinase, SH3 domain; 2.00A {Homo sapiens} SCOP: a.116.1.1
Probab=100.00 E-value=2e-39 Score=314.26 Aligned_cols=195 Identities=19% Similarity=0.301 Sum_probs=150.3
Q ss_pred CCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCC---CCCCCchhhhH
Q 010138 170 SVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGV---VPHGIDVHCLA 246 (517)
Q Consensus 170 ~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~---~~~~~D~h~VA 246 (517)
...+||++|+++..+ ...+..||.+|.+|++|| +++|+++|||||++|+..+ ++|++.|++|. ....+|+|+||
T Consensus 4 d~~~fGv~L~~l~~~-~~~~~~vP~iv~~~i~~l-~~~gl~~eGIfR~sG~~~~-~~l~~~~d~~~~~~~~~~~dv~~va 80 (216)
T 1pbw_A 4 DVEQQALTLPDLAEQ-FAPPDIAPPLLIKLVEAI-EKKGLECSTLYRTQSSSNL-AELRQLLDCDTPSVDLEMIDVHVLA 80 (216)
T ss_dssp --------CCCHHHH-CCTTSCSCHHHHHHHHHH-HHHHTTCTTTTSSCCSCCT-THHHHHSCSSSSCCCGGGBCHHHHH
T ss_pred ccccCCCcHHHHHhc-cCCCCCcCHHHHHHHHHH-HHcCCCCCCeeeCCChHHH-HHHHHHHHcCCCCCCccccCHHHHH
Confidence 456999999998643 334567999999999998 6799999999999999999 99999999974 23568999999
Q ss_pred HHHHHHHHhCCCCCCCCCChHHHhhccc--------HHHHHHHHH--hcChhHHHHHHHHHHHhhHhhhccccCCCChhh
Q 010138 247 GLIKAWLRELPTGVLDSLTPDQVMHCNT--------EEDCTQLVK--LLPPSEAALLDWAINLMADVVQHEQYNKMNARN 316 (517)
Q Consensus 247 sLLK~fLReLPePLlp~~ly~~~i~~~~--------~e~l~~Ll~--~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~N 316 (517)
++||.|||+||+||||.++|+.|+++.+ .+.++.++. +||+.|+.+|+||+.||++|+++++.|||++.|
T Consensus 81 ~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~~~~~~l~~ll~~~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~N 160 (216)
T 1pbw_A 81 DAFKRYLLDLPNPVIPAAVYSEMISLAPEVQSSEEYIQLLKKLIRSPSIPHQYWLTLQYLLKHFFKLSQTSSKNLLNARV 160 (216)
T ss_dssp HHHHHHHHTSSSCSSCHHHHHHHHHHGGGCCSHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHH
T ss_pred HHHHHHHHhCCCCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHhcccccCCCHHH
Confidence 9999999999999999999999998743 245788898 999999999999999999999999999999999
Q ss_pred hHHhhhcccCCCCChhHHHHHHHHHHHHHHHHHHHHHHhhHHHHhhhccCCCCCCCC
Q 010138 317 IAMVFAPNMTQMADPLTALIHAVQVMNFLKTLILKILREREEAAAKARLLSPCSDSP 373 (517)
Q Consensus 317 LAiVFaPnLlr~~d~~~~l~~~~~~~~~v~~LIen~l~~fee~~~~a~~~p~~s~sP 373 (517)
||+||||+|+++++...... .....+++.||+|+..+|+.. +.+|+.++++
T Consensus 161 LAivf~P~Ll~~~~~~~~~~--~~~~~vve~LI~~~~~iF~~~----P~~pp~p~~~ 211 (216)
T 1pbw_A 161 LSEIFSPMLFRFSAASSDNT--ENLIKVIEILISTEWNERQPA----PALPPKPPKP 211 (216)
T ss_dssp HHHHHHHHHHTCSSCCHHHH--HHHHHHHHHHHHTTC--------------------
T ss_pred HHHHHhhhcCCCCCCchhhh--HHHHHHHHHHHhhhHHhcCCC----CCCCCCCCCC
Confidence 99999999999887543322 677888999998888888654 4555555444
No 5
>2osa_A N-chimaerin; RHO-GAP, GTPase activation, structural genomics, structural genomics consortium, SGC, signaling protein; 1.80A {Homo sapiens}
Probab=100.00 E-value=2.7e-38 Score=302.98 Aligned_cols=183 Identities=21% Similarity=0.322 Sum_probs=158.4
Q ss_pred CCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcC-C--CC---CCCchh
Q 010138 170 SVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKG-V--VP---HGIDVH 243 (517)
Q Consensus 170 ~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g-~--~~---~~~D~h 243 (517)
..++||++|+++.... +..||.+|.+|+++| +++|+++|||||++|+..++++|++.++++ . .. ...|+|
T Consensus 5 ~~~vFG~~L~~~~~~~---~~~vP~iv~~~i~~l-~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~d~~~~~~~d~~ 80 (202)
T 2osa_A 5 VKKVYSCDLTTLVKAH---TTKRPMVVDMCIREI-ESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDIN 80 (202)
T ss_dssp --CCTTSCHHHHHHHH---TCSSCHHHHHHHHHH-HHHCTTSTTTTTSCCCHHHHHHHHHHHHHHGGGCCCSTTTCCCHH
T ss_pred CCCccCCChHHHHHHc---CCCCCcHHHHHHHHH-HHhCCCcCCeeeecCcHHHHHHHHHHHHcCCCccCCCccccccHH
Confidence 3579999999986432 467999999999998 689999999999999999999999999974 2 11 246999
Q ss_pred hhHHHHHHHHHhCCCCCCCCCChHHHhhcc-------cHHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhh
Q 010138 244 CLAGLIKAWLRELPTGVLDSLTPDQVMHCN-------TEEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARN 316 (517)
Q Consensus 244 ~VAsLLK~fLReLPePLlp~~ly~~~i~~~-------~~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~N 316 (517)
+||++||.|||+||+||||.++|+.|+++. +.+.++.++.+||+.|+.+|+||+.||++|+++++.|||++.|
T Consensus 81 ~va~lLK~flreLpePLl~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~~~~NkM~~~N 160 (202)
T 2osa_A 81 IITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAEN 160 (202)
T ss_dssp HHHHHHHHHHHTCSSCSSCTTTHHHHHHHHHCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHH
T ss_pred HHHHHHHHHHHhCCCccCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhccccCCCCCHHH
Confidence 999999999999999999999999999863 2356889999999999999999999999999999999999999
Q ss_pred hHHhhhcccCCCCC--hhHHHHHHHHHHHHHHHHHHHHHHhh
Q 010138 317 IAMVFAPNMTQMAD--PLTALIHAVQVMNFLKTLILKILRER 356 (517)
Q Consensus 317 LAiVFaPnLlr~~d--~~~~l~~~~~~~~~v~~LIen~l~~f 356 (517)
||+||||+|+++++ ....+.+......+++.||+|+-..|
T Consensus 161 La~vf~P~Ll~~~~~~~~~~~~~~~~~~~vve~LI~~~~~iF 202 (202)
T 2osa_A 161 LGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF 202 (202)
T ss_dssp HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHTHHHHC
T ss_pred HHHHHccccCCCCCccHHHHHHHHHHHHHHHHHHHHcccccC
Confidence 99999999999875 34455566777889999999886654
No 6
>3byi_A RHO GTPase activating protein 15; BM046, arhgap15, structural genomics consortium, signaling protein; 2.25A {Homo sapiens}
Probab=100.00 E-value=1.6e-38 Score=307.17 Aligned_cols=185 Identities=19% Similarity=0.310 Sum_probs=160.1
Q ss_pred CCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCCC--C---CCchhh
Q 010138 170 SVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVVP--H---GIDVHC 244 (517)
Q Consensus 170 ~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~~--~---~~D~h~ 244 (517)
+.++||++|+++... .+..||.+|.+|+++| +++|+++|||||++|+..++++|++.+|+|... + ..|+|+
T Consensus 16 ~~~vFG~~L~~~~~~---~~~~vP~~v~~~i~~l-~~~gl~~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~dvh~ 91 (214)
T 3byi_A 16 KDQIFGSHLHKVCER---ENSTVPWFVKQCIEAV-EKRGLDVDGIYRVSGNLATIQKLRFIVNQEEKLNLDDSQWEDIHV 91 (214)
T ss_dssp CCCSTTSCHHHHHHH---HTCSSCHHHHHHHHHH-HHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCCCCTTSGGGCSHHH
T ss_pred cCCccCCcHHHHHHH---cCCCCChHHHHHHHHH-HHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCCCcccccchHH
Confidence 467999999987532 2568999999999998 689999999999999999999999999998532 2 259999
Q ss_pred hHHHHHHHHHhCCCCCCCCCChHHHhhccc-------HHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhh
Q 010138 245 LAGLIKAWLRELPTGVLDSLTPDQVMHCNT-------EEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNI 317 (517)
Q Consensus 245 VAsLLK~fLReLPePLlp~~ly~~~i~~~~-------~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NL 317 (517)
||++||.|||+||+||||.++|+.|+++.+ .+.++.++.+||+.|+.+|+||+.||++|+++++.|||++.||
T Consensus 92 va~lLK~flreLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~v~~~s~~NkM~~~NL 171 (214)
T 3byi_A 92 VTGALKMFFRELPEPLFPYSFFEQFVEAIKKQDNNTRIEAVKSLVQKLPPPNRDTMKVLFGHLTKIVAKASKNLMSTQSL 171 (214)
T ss_dssp HHHHHHHHHHHSSSCSSCHHHHHHHHHHHTSSSHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHH
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcccCCCCCHHHh
Confidence 999999999999999999999999987632 3568899999999999999999999999999999999999999
Q ss_pred HHhhhcccCCCCChh-HHHHHHHHHHHHHHHHHHHHHHhhHH
Q 010138 318 AMVFAPNMTQMADPL-TALIHAVQVMNFLKTLILKILREREE 358 (517)
Q Consensus 318 AiVFaPnLlr~~d~~-~~l~~~~~~~~~v~~LIen~l~~fee 358 (517)
|+||||+|+++.... ....+......+++.||+|+-.+|++
T Consensus 172 a~vf~P~Ll~~~~~~~~~~~~~~~~~~vve~LI~~~~~iF~~ 213 (214)
T 3byi_A 172 GIVFGPTLLRAENETGNMAIHMVYQNQIAELMLSEYSKIFGS 213 (214)
T ss_dssp HHHHHHHHHCCTTSSSCHHHHHHHHHHHHHHHHHTHHHHHC-
T ss_pred HHHhccccCCCCCccHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999987542 22334556678899999999888854
No 7
>3iug_A RHO/CDC42/RAC GTPase-activating protein RICS; structural genomics consortium (SGC), GAP, alternative splicing, cell junction, cell membrane; 1.77A {Homo sapiens}
Probab=100.00 E-value=2.2e-38 Score=309.34 Aligned_cols=186 Identities=20% Similarity=0.327 Sum_probs=153.6
Q ss_pred CCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCCCC------CCchh
Q 010138 170 SVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVVPH------GIDVH 243 (517)
Q Consensus 170 ~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~~~------~~D~h 243 (517)
+.++||++|++++.. .+..||.+|.+|++|| +++|+ +|||||++|+..++++|++.|+.|...+ ..|+|
T Consensus 18 ~~~vFG~~L~~~~~~---~~~~vP~iv~~~i~~i-~~~gl-~eGIfR~~G~~~~i~~L~~~~~~~~~~~~~~~~~~~dvh 92 (229)
T 3iug_A 18 GERVFGCDLGEHLLN---SGFEVPQVLQSCTAFI-ERYGI-VDGIYRLSGVASNIQRLRHEFDSEHVPDLTKEPYVQDIH 92 (229)
T ss_dssp CCCSTTSCHHHHHHH---HCCSSCHHHHHHHHHH-HHHCC-STTTTTSCCCHHHHHHHHHHHHTTCCCCTTSTTTTTCHH
T ss_pred CCCeECcchHHHHHh---cCCCCCHHHHHHHHHH-HHcCC-CCCCeecCCcHHHHHHHHHHHhcCCCCCccccccccchH
Confidence 568999999987532 3567999999999998 68999 8999999999999999999999986431 25999
Q ss_pred hhHHHHHHHHHhCCCCCCCCCChHHHhhccc-------HHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhh
Q 010138 244 CLAGLIKAWLRELPTGVLDSLTPDQVMHCNT-------EEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARN 316 (517)
Q Consensus 244 ~VAsLLK~fLReLPePLlp~~ly~~~i~~~~-------~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~N 316 (517)
+||++||.|||+||+||||.++|+.|+++.+ .+.++.++.+||+.|+.+|+||+.||++|+++++.|||++.|
T Consensus 93 ~va~lLK~fLreLPePLl~~~ly~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~N 172 (229)
T 3iug_A 93 SVGSLCKLYFRELPNPLLTYQLYEKFSDAVSAATDEERLIKIHDVIQQLPPPHYRTLEFLMRHLSLLADYCSITNMHAKN 172 (229)
T ss_dssp HHHHHHHHHHHHCSSCTTCTTTHHHHHHHHTSSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHH
T ss_pred HHHHHHHHHHHHCCCCCcCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCChHH
Confidence 9999999999999999999999999988632 346788999999999999999999999999999999999999
Q ss_pred hHHhhhcccCCCCCh-------hHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 010138 317 IAMVFAPNMTQMADP-------LTALIHAVQVMNFLKTLILKILREREEAA 360 (517)
Q Consensus 317 LAiVFaPnLlr~~d~-------~~~l~~~~~~~~~v~~LIen~l~~fee~~ 360 (517)
||+||||+|+|+++. ...+.+......+++.||+++-..|.+..
T Consensus 173 LAivf~P~Ll~~~~~~~~~~~~~~~~~~~~~~~~vve~LI~~~~~iF~~~~ 223 (229)
T 3iug_A 173 LAIVWAPNLLRSKQIESACFSGTAAFMEVRIQSVVVEFILNHVDVLFSGRI 223 (229)
T ss_dssp HHHHHHHHHCCC-------------------CHHHHHHHHHTHHHHTC---
T ss_pred HHHHHhccccCCCcccccccchHHHHHHHHHHHHHHHHHHHhHHHhCCCcH
Confidence 999999999998752 22344455567889999999988887653
No 8
>3fk2_A Glucocorticoid receptor DNA-binding factor 1; structural genomics consortium, GTPase-activating protein, SGC, alternative splicing, anti-oncogene; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.1e-38 Score=309.82 Aligned_cols=183 Identities=17% Similarity=0.312 Sum_probs=162.2
Q ss_pred CCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCCC----CCCchhhh
Q 010138 170 SVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVVP----HGIDVHCL 245 (517)
Q Consensus 170 ~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~~----~~~D~h~V 245 (517)
..++||++|+.++. .+..||.+|.+|++|| +++|+++|||||++|+..++++|++.||.|... ..+|+|+|
T Consensus 50 ~~~vFGv~L~~~~~----~~~~vP~iv~~~i~~l-~~~gl~~eGIFR~sG~~~~v~~L~~~~d~~~~~~~~~~~~dvh~v 124 (246)
T 3fk2_A 50 ESNYFGVPLTTVVT----PEKPIPIFIERCIEYI-EATGLSTEGIYRVSGNKSEMESLQRQFDQDHNLDLAEKDFTVNTV 124 (246)
T ss_dssp CCSSTTSCGGGGCC----SSSCSCHHHHHHHHHH-HHHCTTSTTTTTSCCCHHHHHHHHHHHHHCTTCCSGGGTCCHHHH
T ss_pred CCCeeCCCHHHHhc----CCCCCChHHHHHHHHH-HHhCCCCCCeeEeCCcHHHHHHHHHHHhcCCCCCcccccCcHHHH
Confidence 56899999999852 2457999999999998 689999999999999999999999999998643 25699999
Q ss_pred HHHHHHHHHhCCCCCCCCCChHHHhhccc-------HHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhhH
Q 010138 246 AGLIKAWLRELPTGVLDSLTPDQVMHCNT-------EEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNIA 318 (517)
Q Consensus 246 AsLLK~fLReLPePLlp~~ly~~~i~~~~-------~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NLA 318 (517)
|++||.|||+||+||||+.+|+.|+++.+ .+.++.++.+||+.|+.+|.||+.||++|+++++.|||++.|||
T Consensus 125 a~lLK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkMt~~NLA 204 (246)
T 3fk2_A 125 AGAMKSFFSELPDPLVPYNMQIDLVEAHKINDREQKLHALKEVLKKFPKENHEVFKYVISHLNKVSHNNKVNLMTSENLS 204 (246)
T ss_dssp HHHHHHHHHHSSSCSSCHHHHHHHHHHTTCCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCccCCHHHHHHHHHHhccCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhccCccCCchHHhH
Confidence 99999999999999999999999998743 35688999999999999999999999999999999999999999
Q ss_pred HhhhcccCCCCC-hhHHHHHHHHHHHHHHHHHHHHHHhhH
Q 010138 319 MVFAPNMTQMAD-PLTALIHAVQVMNFLKTLILKILRERE 357 (517)
Q Consensus 319 iVFaPnLlr~~d-~~~~l~~~~~~~~~v~~LIen~l~~fe 357 (517)
+||||+|+|+.. ....+........+++.||+++-..|.
T Consensus 205 ivf~P~Llrp~~~~~~~~~~~~~~~~ive~LI~~~~~iF~ 244 (246)
T 3fk2_A 205 ICFWPTLMRPDFSTMDALTATRTYQTIIELFIQQCPFFFY 244 (246)
T ss_dssp HHHHHHHHCCCSSSSCHHHHHHHHHHHHHHHHHTHHHHHC
T ss_pred HHhcccccCCCCccHHHHHHHHHHHHHHHHHHHhHHHhcC
Confidence 999999999764 344556667778899999999877774
No 9
>2ee4_A RHO GTPase activating protein 5 variant; all alpha protein, GTPase-activating protein for RHO family members, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2ee5_A
Probab=100.00 E-value=3.9e-38 Score=303.41 Aligned_cols=183 Identities=17% Similarity=0.308 Sum_probs=157.9
Q ss_pred CCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCCCC----CCchhhh
Q 010138 170 SVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVVPH----GIDVHCL 245 (517)
Q Consensus 170 ~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~~~----~~D~h~V 245 (517)
..++||++|+++.. .+..||.+|.+|++|| +++|+++|||||++|+..++++|++.|++|...+ .+|+|+|
T Consensus 9 ~~~~FG~~L~~~~~----~~~~vP~iv~~~i~~l-~~~gl~~eGIfR~~g~~~~i~~l~~~~~~~~~~~~~~~~~d~~~v 83 (209)
T 2ee4_A 9 ESNYFGMPLQDLVT----AEKPIPLFVEKCVEFI-EDTGLCTEGLYRVSGNKTDQDNIQKQFDQDHNINLVSMEVTVNAV 83 (209)
T ss_dssp CCSSSSSCHHHHSC----SSCCSCHHHHHHHHHH-HHTCSCCTTTTTSCCCHHHHHHHHHHHHHCTTCCHHHHTCCHHHH
T ss_pred CCCeeCCcHHHHHh----cCCCCChHHHHHHHHH-HHhCCCCCCccccCCCHHHHHHHHHHHhcCCCCCcccCCCCHHHH
Confidence 56799999998752 2457999999999998 6899999999999999999999999999986432 5799999
Q ss_pred HHHHHHHHHhCCCCCCCCCChHHHhhccc-------HHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhhH
Q 010138 246 AGLIKAWLRELPTGVLDSLTPDQVMHCNT-------EEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNIA 318 (517)
Q Consensus 246 AsLLK~fLReLPePLlp~~ly~~~i~~~~-------~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NLA 318 (517)
|++||.|||+||+||||.++|+.|+++.+ .+.++.++.+||+.|+.+|+||+.||++|+++++.|||++.|||
T Consensus 84 a~lLK~flreLPePLi~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~NLa 163 (209)
T 2ee4_A 84 AGALKAFFADLPDPLIPYSLHPELLEAAKIPDKTERLHALKEIVKKFHPVNYDVFRYVITHLNRVSQQHKINLMTADNLS 163 (209)
T ss_dssp HHHHHHHHHHSSSCSSCTTTHHHHHHHHSCSSHHHHHHHHHHHTTTSCTTHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcccccCCCHHHHH
Confidence 99999999999999999999999998632 35688899999999999999999999999999999999999999
Q ss_pred HhhhcccCCCCChhH-HHHHHHHHHHHHHHHHHHHHHhhH
Q 010138 319 MVFAPNMTQMADPLT-ALIHAVQVMNFLKTLILKILRERE 357 (517)
Q Consensus 319 iVFaPnLlr~~d~~~-~l~~~~~~~~~v~~LIen~l~~fe 357 (517)
+||||+|+++..... .+........+++.||+|+-..|.
T Consensus 164 ivf~P~L~~~~~~~~~~l~~~~~~~~vve~LI~~~~~iF~ 203 (209)
T 2ee4_A 164 ICFWPTLMRPDFENREFLSTTKIHQSVVETFIQQCQFFFY 203 (209)
T ss_dssp HHHHHHHSCCCCCSSCCSCCCTTHHHHHHHHHHTHHHHTT
T ss_pred HHhcccccCCCCccHHHHHHhHHHHHHHHHHHHhhHHHcC
Confidence 999999999864321 122234456889999998877764
No 10
>3kuq_A RHO GTPase-activating protein 7; structural genomics consortium, GTPase activation, SGC, alternative splicing, cytoplasm, phosphoprotein; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=297.25 Aligned_cols=158 Identities=21% Similarity=0.335 Sum_probs=142.6
Q ss_pred CCCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCC---CCCCCchhhh
Q 010138 169 ASVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGV---VPHGIDVHCL 245 (517)
Q Consensus 169 ~~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~---~~~~~D~h~V 245 (517)
...++||++|.+++.. .+..||.+|.+|++|| +++|+++|||||++|+..+|++|++.++.+. ..+..|+|+|
T Consensus 16 ~~~~vFGv~L~~~~~~---~~~~vP~~v~~~i~~l-~~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~~~~~v 91 (228)
T 3kuq_A 16 FQGSVFGVPLTVNVQR---TGQPLPQSIQQAMRYL-RNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDCVNYEGQSAYDV 91 (228)
T ss_dssp CTTSSTTCCHHHHHHH---HSSSSCHHHHHHHHHH-HHHCTTSTTTTTSCCCHHHHHHHHHHHTBSSSCCCCTTCCHHHH
T ss_pred CCCCEECCchHHHHHH---cCCCCCHHHHHHHHHH-HHhCCCcCCeeecCCCHHHHHHHHHHHhcCCCcCCcccCCHHHH
Confidence 3678999999987533 2567999999999998 6899999999999999999999999998642 2357899999
Q ss_pred HHHHHHHHHhCCCCCCCCCChHHHhhcc-------cHHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhhH
Q 010138 246 AGLIKAWLRELPTGVLDSLTPDQVMHCN-------TEEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNIA 318 (517)
Q Consensus 246 AsLLK~fLReLPePLlp~~ly~~~i~~~-------~~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NLA 318 (517)
|++||.|||+||+||||..+|+.|+.+. +.+.++.++.+||+.|+.+|+||+.||++|+++++.|||++.|||
T Consensus 92 a~lLK~fLReLPePLl~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA 171 (228)
T 3kuq_A 92 ADMLKQYFRDLPEPLMTNKLSETFLQIYQYVPKDQRLQAIKAAIMLLPDENREVLQTLLYFLSDVTAAVKENQMTPTNLA 171 (228)
T ss_dssp HHHHHHHHHHSSSCTTCSSHHHHHHHHHHHSCGGGHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhccccCCchhHhH
Confidence 9999999999999999999999999863 346789999999999999999999999999999999999999999
Q ss_pred HhhhcccCCCCC
Q 010138 319 MVFAPNMTQMAD 330 (517)
Q Consensus 319 iVFaPnLlr~~d 330 (517)
+||||+||+...
T Consensus 172 ivf~P~Ll~~~~ 183 (228)
T 3kuq_A 172 VCLAPSLFHLNT 183 (228)
T ss_dssp HHHHHHHHTCCC
T ss_pred HHHhhhhcCCCC
Confidence 999999999764
No 11
>3eap_A RHO GTPase-activating protein 11A; GAP, structural genomics consortium, GTPase activation, phosphoprotein, polymorphism hydrolase activator, SGC; 2.30A {Homo sapiens}
Probab=100.00 E-value=1e-36 Score=305.35 Aligned_cols=185 Identities=22% Similarity=0.316 Sum_probs=147.3
Q ss_pred CCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCC-CCCCchhhhHHH
Q 010138 170 SVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVV-PHGIDVHCLAGL 248 (517)
Q Consensus 170 ~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~-~~~~D~h~VAsL 248 (517)
++++||++|+++.......+..||.+|.+|+.|| + +|+++|||||++|+...+++|++.||.|.. ....|+|+||++
T Consensus 61 ~~~vFGv~L~~l~~~~~~~~~~iP~~l~~~~~~l-e-~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~~~va~l 138 (271)
T 3eap_A 61 GGKIFGVPFNALPHSAVPEYGHIPSFLVDACTSL-E-DHIHTEGLFRKSGSVIRLKALKNKVDHGEGCLSSAPPCDIAGL 138 (271)
T ss_dssp CCSSTTSCGGGSCEEEETTTEEEEHHHHHHHHHH-G-GGTTC--------CHHHHHHHHHHHHHC-----CCCHHHHHHH
T ss_pred CCCeeCCcHHHHHhhccCCCCCcChHHHHHHHHH-H-hCCCCCCeeeeCCCHHHHHHHHHHHHcCCCCcccccHHHHHHH
Confidence 5789999999985433333557999999999998 4 489999999999999999999999999864 467899999999
Q ss_pred HHHHHHhCCCCCCCCCChHHHhhccc------HHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhhHHhhh
Q 010138 249 IKAWLRELPTGVLDSLTPDQVMHCNT------EEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNIAMVFA 322 (517)
Q Consensus 249 LK~fLReLPePLlp~~ly~~~i~~~~------~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NLAiVFa 322 (517)
||.|||+||+||||+++|+.|+.+.+ ...++.++..||+.|+.+|+||+.||++|+++++.|||++.|||+|||
T Consensus 139 LK~fLReLPePLl~~~ly~~~~~~~~~~~~~~~~~~~~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~ 218 (271)
T 3eap_A 139 LKQFFRELPEPILPADLHEALLKAQQLGTEEKNKATLLLSCLLADHTVHVLRYFFNFLRNVSLRSSENKMDSSNLAVIFA 218 (271)
T ss_dssp HHHHHHHSSSCSSCGGGHHHHHHHTTSCHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHHHHHHHH
T ss_pred HHHHHHhCCcccCCHHHHHHHHHHHHHhHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHH
Confidence 99999999999999999999998743 234566778899999999999999999999999999999999999999
Q ss_pred cccCCCCCh-----hHHHHHHHHHHHHHHHHHHHHHHhh
Q 010138 323 PNMTQMADP-----LTALIHAVQVMNFLKTLILKILRER 356 (517)
Q Consensus 323 PnLlr~~d~-----~~~l~~~~~~~~~v~~LIen~l~~f 356 (517)
|+|+++++. .....+......+++.||+|+-++|
T Consensus 219 P~Ll~~~~~~~~~~~~~~~~~~~~~~vve~LI~~~~~IF 257 (271)
T 3eap_A 219 PNLLQTSEGHEKMSSNTEKKLRLQAAVVQTLIDYASDIG 257 (271)
T ss_dssp HHHHTCCCCCTTCCHHHHHHHHHHHHHHHHHHHTGGGTT
T ss_pred hHhccCCCCccchhhhHHHHHHHHHHHHHHHHHhHHHHh
Confidence 999998762 1122334455678999999887776
No 12
>1f7c_A Rhogap protein; GTPase activating protein, RHO GTPase regulator, BH domain, signaling protein; 2.40A {Gallus gallus} SCOP: a.116.1.1
Probab=100.00 E-value=9.2e-37 Score=298.62 Aligned_cols=187 Identities=16% Similarity=0.252 Sum_probs=143.6
Q ss_pred CccccccccccccccCC-CCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHH-HHhcCC---C-C---CCCc
Q 010138 171 VSVFGVSAKSMQCSYDD-RGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRD-QLNKGV---V-P---HGID 241 (517)
Q Consensus 171 ~~vFGv~L~~L~~~~~~-~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~-~Ld~g~---~-~---~~~D 241 (517)
.++||+||... +..+. -...+|.+|.+|++|| +++|+++|||||++|+..+|++|++ .+|.+. + . ..+|
T Consensus 16 ~pvfgvpl~~~-~~~~~~l~~~~p~iv~~ci~~l-e~~gl~~eGIfR~sG~~~~v~~l~~~~~d~~~~~~~~l~~~~~~d 93 (231)
T 1f7c_A 16 EPVYNSNKDNQ-SEGTAQLDSIGFSIIKKCIHAV-ETRGINEQGLYRIVGVNSRVQKLLSILMDPKTATETETEICAEWE 93 (231)
T ss_dssp ----------------CCSSHHHHHHHHHHHHHH-HHHCTTCTTTTTSCCCHHHHHHHHHHHHCC------CCCCCTTSC
T ss_pred CCccCCcchhc-cccccccCCcCccHHHHHHHHH-HHhCCCCCCeeeeCCcHHHHHHHHHHHhCcCCCcccCcccccccc
Confidence 46999999875 33322 2335899999999998 6799999999999999999999987 578763 1 1 2489
Q ss_pred hhhhHHHHHHHHHhCCCCCCCCCChHHHhhcc-------cHHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCCh
Q 010138 242 VHCLAGLIKAWLRELPTGVLDSLTPDQVMHCN-------TEEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNA 314 (517)
Q Consensus 242 ~h~VAsLLK~fLReLPePLlp~~ly~~~i~~~-------~~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~ 314 (517)
+|+||++||.|||+||+||||+++|+.|+.+. +.+.++.++.+||+.|+.+|+||+.||++|+++++.|||++
T Consensus 94 vh~va~lLK~flReLPePLl~~~ly~~~~~~~~~~~~~~r~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~ 173 (231)
T 1f7c_A 94 IKTITSALKTYLRMLPGPLMMYQFQRSFIKAAKLENQESRVSEIHSLVHRLPEKNRQMLHLLMNHLAKVADNHKQNLMTV 173 (231)
T ss_dssp HHHHHHHHHHHHHTSSSCTTCHHHHHHHHHHHTCSSHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHTHHHHCCCH
T ss_pred HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhcCCCCCCCH
Confidence 99999999999999999999999999999863 23568899999999999999999999999999999999999
Q ss_pred hhhHHhhhcccCCCCCh-hHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 010138 315 RNIAMVFAPNMTQMADP-LTALIHAVQVMNFLKTLILKILREREEA 359 (517)
Q Consensus 315 ~NLAiVFaPnLlr~~d~-~~~l~~~~~~~~~v~~LIen~l~~fee~ 359 (517)
.|||+||||+|++++.. ...+.+......+++.||+|+-..|.+.
T Consensus 174 ~NLAivf~P~Ll~~~~~~~~~~~~~~~~~~vve~LI~~~~~iF~~~ 219 (231)
T 1f7c_A 174 ANLGVVFGPTLLRPQEETVAAIMDIKFQNIVIEILIENHEKIFNTV 219 (231)
T ss_dssp HHHHHHHHHHHSCC---CCSGGGGHHHHHHHHHHHHHTHHHHHHSC
T ss_pred HHHHHHhccccCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999999998753 2233445566778899999988888543
No 13
>2ovj_A Mgcracgap, RAC GTPase-activating protein 1; signaling protein, structural genomics, structural genomics consortium, SGC; HET: 7PE; 1.49A {Homo sapiens}
Probab=100.00 E-value=3.2e-35 Score=281.91 Aligned_cols=178 Identities=20% Similarity=0.299 Sum_probs=153.8
Q ss_pred cccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCCC---CC-CchhhhHHHHHHH
Q 010138 177 SAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVVP---HG-IDVHCLAGLIKAW 252 (517)
Q Consensus 177 ~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~~---~~-~D~h~VAsLLK~f 252 (517)
.|+++. ...+..||.+|.+|++|| +++|+++|||||++|+..++++|++.+++|... .. .|+|+||++||.|
T Consensus 5 ~L~~~~---~~~~~~vP~iv~~~i~~l-~~~gl~~eGIfR~sG~~~~i~~L~~~~~~~~~~~~~~~~~d~h~va~lLK~f 80 (201)
T 2ovj_A 5 MLADFV---SQTSPMIPSIVVHCVNEI-EQRGLTETGLYRISGCDRTVKELKEKFLRVKTVPLLSKVDDIHAICSLLKDF 80 (201)
T ss_dssp CGGGGC---CSSSSCCCHHHHHHHHHH-HHHTTTSTTTTTSCCCHHHHHHHHHHHHTTCSCCCGGGCCCHHHHHHHHHHH
T ss_pred cHHHHh---cccCCCCChHHHHHHHHH-HHhCCCcCceeeeCCcHHHHHHHHHHHHcCCCCccccccCCHHHHHHHHHHH
Confidence 455553 234678999999999998 679999999999999999999999999998532 34 4999999999999
Q ss_pred HHhCCCCCCCCCChHHHhhcc-------cHHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhhHHhhhccc
Q 010138 253 LRELPTGVLDSLTPDQVMHCN-------TEEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNIAMVFAPNM 325 (517)
Q Consensus 253 LReLPePLlp~~ly~~~i~~~-------~~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NLAiVFaPnL 325 (517)
||+||+||||.++|+.|+++. +.+.++.++.+||+.|+.+|+||+.||++|+++ +.|||+++|||+||||+|
T Consensus 81 lreLpePLi~~~l~~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~-~~NkM~~~NLa~vf~P~l 159 (201)
T 2ovj_A 81 LRNLKEPLLTFRLNRAFMEAAEITDEDNSIAAMYQAVGELPQANRDTLAFLMIHLQRVAQS-PHTKMDVANLAKVFGPTI 159 (201)
T ss_dssp HHTSSSCTTCTTTHHHHHHHHHCSSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHC-TTSCCCHHHHHHHHHHHH
T ss_pred HHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHhhhhh
Confidence 999999999999999999873 235688999999999999999999999999996 689999999999999999
Q ss_pred CCCCC----hhHHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 010138 326 TQMAD----PLTALIHAVQVMNFLKTLILKILREREEA 359 (517)
Q Consensus 326 lr~~d----~~~~l~~~~~~~~~v~~LIen~l~~fee~ 359 (517)
++.+. +...+.+......+++.||+++-+.|...
T Consensus 160 l~~~~~~~~~~~~~~~~~~~~~vv~~LI~~~~~if~~f 197 (201)
T 2ovj_A 160 VAHAVPNPDPVTMLQDIKRQPKVVERLLSLPLEYWSQF 197 (201)
T ss_dssp TCCSSSSCCHHHHHHHHHHHHHHHHHHHHSCHHHHHGG
T ss_pred cCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 98643 34566777888899999999887777643
No 14
>2xs6_A Phosphatidylinositol 3-kinase regulatory subunit; structural genomics consortium, SGC, transferase; 2.09A {Homo sapiens}
Probab=100.00 E-value=9.4e-37 Score=296.36 Aligned_cols=178 Identities=16% Similarity=0.204 Sum_probs=138.4
Q ss_pred CCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCCCCCCchhhhHHHH
Q 010138 170 SVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVVPHGIDVHCLAGLI 249 (517)
Q Consensus 170 ~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~~~~~D~h~VAsLL 249 (517)
..++||++|+++..++. ....||.+|.+|+++| +++|+++|||||++|+. ||+.++. ......|+|+||++|
T Consensus 19 ~~~vFGv~L~~l~~~~~-~~~~vP~iv~~~i~~l-~~~Gl~~eGIfR~sG~~-----lr~~~~~-~dl~~~dvh~va~lL 90 (214)
T 2xs6_A 19 YFQSMGLTLPDLPEQFS-PPDVAPPLLVKLVEAI-ERTGLDSESHYRPELPA-----PRTDWSL-SDVDQWDTAALADGI 90 (214)
T ss_dssp ------CCCCCHHHHCC-TTCCSCHHHHHHHHHH-HHHCTTCSGGGCCSCCC-----CCCCCCC-TTGGGCCHHHHHHHH
T ss_pred CCcccCcCHHHHHHhhC-CCCCCCHHHHHHHHHH-HHhCCCCCCCeeeCHHH-----HHhcccc-CCCccCCHHHHHHHH
Confidence 46799999999865322 3356999999999998 68899999999999998 4432211 123468999999999
Q ss_pred HHHHHhCCCCCCCCCChHHHhhcccH----HHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhhHHhhhccc
Q 010138 250 KAWLRELPTGVLDSLTPDQVMHCNTE----EDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNIAMVFAPNM 325 (517)
Q Consensus 250 K~fLReLPePLlp~~ly~~~i~~~~~----e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NLAiVFaPnL 325 (517)
|.|||+||+||||..+|+.|+++.+. +.+..++.+||+.|+.+|+||+.||++|+++++.|||++.|||+||||+|
T Consensus 91 K~flReLPePLi~~~ly~~~i~~~~~~~~~~~~~~l~~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLAivf~P~L 170 (214)
T 2xs6_A 91 KSFLLALPAPLVTPEASAEARRALREAAGPVGPALEPPTLPLHRALTLRFLLQHLGRVARRAPALGPAVRALGATFGPLL 170 (214)
T ss_dssp HHHHHHSSSCSSCHHHHHHHHHHHHCC--CCGGGGSTTTSCHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHHhhhh
Confidence 99999999999999999999987432 23447889999999999999999999999999999999999999999999
Q ss_pred CCCCCh----------hHHHHHHHHHHHHHHHHHHHHHHh
Q 010138 326 TQMADP----------LTALIHAVQVMNFLKTLILKILRE 355 (517)
Q Consensus 326 lr~~d~----------~~~l~~~~~~~~~v~~LIen~l~~ 355 (517)
+|+++. ...+.+......+++.||.+.+-+
T Consensus 171 l~~~~~~~~~~~~~~~~~~~~d~~~~~~vve~LI~n~ife 210 (214)
T 2xs6_A 171 LRAPPPPSSPPPGGAPDGSEPSPDFPALLVEKLLQEHLEE 210 (214)
T ss_dssp HC------------------CCTTHHHHHHHHHHHHHHHC
T ss_pred cCCcccccccccccchhhhHHhHHHHHHHHHHHHhhhccc
Confidence 998763 344556667789999999876544
No 15
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=100.00 E-value=3e-34 Score=306.47 Aligned_cols=183 Identities=21% Similarity=0.341 Sum_probs=158.9
Q ss_pred CCccccccccccccccCCCCCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCC----CC--CCCchh
Q 010138 170 SVSVFGVSAKSMQCSYDDRGNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGV----VP--HGIDVH 243 (517)
Q Consensus 170 ~~~vFGv~L~~L~~~~~~~g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~----~~--~~~D~h 243 (517)
..++||++|++++.. .+..||.+|..|+++| +++|+++|||||++|+...|++|++.||++. +. ...|+|
T Consensus 266 ~~~vFG~~L~~~~~~---~~~~vP~iv~~~i~~l-e~~gl~~eGIfR~sG~~~~i~~L~~~~d~~~~~~~~~~~~~~dv~ 341 (463)
T 3cxl_A 266 VKKVYSCDLTTLVKA---HTTKRPMVVDMCIREI-ESRGLNSEGLYRVSGFSDLIEDVKMAFDRDGEKADISVNMYEDIN 341 (463)
T ss_dssp CCCCTTSCHHHHHHH---HTCSSCHHHHHHHHHH-HHHCSCSTTTTTSCCCHHHHHHHHHHHHHHGGGCCCSTTTCCCHH
T ss_pred cccccccccchhhhc---cCCCCCeeHHHHHHHH-HhcCCCCCceeEecCCHHHHHHHHHHHHhcCCcCCcccccCCCcc
Confidence 357999999987643 2567999999999998 7899999999999999999999999999742 11 246999
Q ss_pred hhHHHHHHHHHhCCCCCCCCCChHHHhhcc-------cHHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhh
Q 010138 244 CLAGLIKAWLRELPTGVLDSLTPDQVMHCN-------TEEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARN 316 (517)
Q Consensus 244 ~VAsLLK~fLReLPePLlp~~ly~~~i~~~-------~~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~N 316 (517)
+||++||.|||+||+||||.++|+.|+++. +.+.++.++.+||+.|+.+|.||+.||++|+++++.|||++.|
T Consensus 342 ~va~lLK~flReLPePLi~~~ly~~~~~~~~~~~~~~~~~~l~~ll~~LP~~n~~~L~~L~~~L~~V~~~~~~NkM~~~N 421 (463)
T 3cxl_A 342 IITGALKLYFRDLPIPLITYDAYPKFIESAKIMDPDEQLETLHEALKLLPPAHCETLRYLMAHLKRVTLHEKENLMNAEN 421 (463)
T ss_dssp HHHHHHHHHHHHCSSCSSCTTTHHHHHHHHHCCCHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHTHHHHCCCHHH
T ss_pred hhhhHHHHHHHhcCCCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhcccccCCCHHH
Confidence 999999999999999999999999999873 2356889999999999999999999999999999999999999
Q ss_pred hHHhhhcccCCCCC--hhHHHHHHHHHHHHHHHHHHHHHHhh
Q 010138 317 IAMVFAPNMTQMAD--PLTALIHAVQVMNFLKTLILKILRER 356 (517)
Q Consensus 317 LAiVFaPnLlr~~d--~~~~l~~~~~~~~~v~~LIen~l~~f 356 (517)
||+||||+|+++++ +...+.+......+++.||+|+-..|
T Consensus 422 LAivf~P~Ll~~~~~~~~~~~~~~~~~~~vve~LI~~~~~iF 463 (463)
T 3cxl_A 422 LGIVFGPTLMRSPELDAMAALNDIRYQRLVVELLIKNEDILF 463 (463)
T ss_dssp HHHHHHHHHCCCCCSCTTGGGGGHHHHHHHHHHHHHTHHHHC
T ss_pred HHHHhhccccCCCCccHHHHHHHHHHHHHHHHHHHhchhhcC
Confidence 99999999999875 33445566677888999999876554
No 16
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=100.00 E-value=8.6e-34 Score=295.23 Aligned_cols=143 Identities=18% Similarity=0.307 Sum_probs=131.7
Q ss_pred CCCccHHHHHHHHHHHHcCCCccCCceeccCChhHHHHHHHHHhcCCCCC-CCchhhhHHHHHHHHHhCCCCCCCCCChH
Q 010138 189 GNSVPTILLMMQRHLYSEGGLKAEGIFRINAENSQEEYVRDQLNKGVVPH-GIDVHCLAGLIKAWLRELPTGVLDSLTPD 267 (517)
Q Consensus 189 g~~VP~IL~~~i~~Lie~~GL~~EGIFRisGs~~~I~~Lr~~Ld~g~~~~-~~D~h~VAsLLK~fLReLPePLlp~~ly~ 267 (517)
...||.+|.+|++|| +++|+++|||||++|+..++++|++.||.|.... ..|+|+||++||.|||+||+||||+.+|+
T Consensus 196 ~~~iP~~v~~~i~~l-~~~Gl~~eGIFR~~G~~~~v~~L~~~~d~~~~~~~~~dvh~va~lLK~fLReLPePLi~~~ly~ 274 (366)
T 3qis_A 196 PLQVPKEIWLLVDHL-FKYACHQEDLFQTPGMQEELQQIIDCLDTSIPETIPGSNHSVAEALLIFLEALPEPVICYELYQ 274 (366)
T ss_dssp CCSSCHHHHHHHHHH-HHHCTTCTTTTTSCCCHHHHHHHHHHHHHCCCSSCCSCHHHHHHHHHHHHHHCSSCSSCHHHHH
T ss_pred CCCcChHHHHHHHHH-HhcCCCCCCeEeCCCCHHHHHHHHHHHcCCCCCccccCHHHHHHHHHHHHHhCCCCCCcHHHHH
Confidence 347999999999998 6799999999999999999999999999987543 46999999999999999999999999999
Q ss_pred HHhhccc-HHHHHHHHHhcChhHHHHHHHHHHHhhHhhhccccCCCChhhhHHhhhcccCCCCChh
Q 010138 268 QVMHCNT-EEDCTQLVKLLPPSEAALLDWAINLMADVVQHEQYNKMNARNIAMVFAPNMTQMADPL 332 (517)
Q Consensus 268 ~~i~~~~-~e~l~~Ll~~LP~~Nr~lL~~Li~fL~~V~~~s~~NKMt~~NLAiVFaPnLlr~~d~~ 332 (517)
.|+++.+ .+.++.++.+||+.|+.+|.||+.||++|+++++.|||+++|||+||||+|+|+++..
T Consensus 275 ~~~~~~~~~~~~~~ll~~LP~~n~~~L~~L~~~L~~V~~~s~~NkM~~~NLA~vf~P~Llr~~~~~ 340 (366)
T 3qis_A 275 RCLDSAYDPRICRQVISQLPRCHRNVFRYLMAFLRELLKFSEYNSVNANMIATLFTSLLLRPPPNL 340 (366)
T ss_dssp HHHHHTTCHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTHHHHCCCHHHHHHHHHHHHSCCCC--
T ss_pred HHHHHhhhHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHhccccCCCHHHHHHHHhhhcccCCCcc
Confidence 9998854 4568899999999999999999999999999999999999999999999999998753
No 17
>2odb_B Serine/threonine-protein kinase PAK 6; small GTPase, CRIB, protein-protein complex, structu genomics, structural genomics consortium, SGC; HET: GCP; 2.40A {Homo sapiens}
Probab=80.16 E-value=0.45 Score=32.98 Aligned_cols=28 Identities=43% Similarity=0.829 Sum_probs=24.2
Q ss_pred CCCCcccccccCceehhhhcc-ccCCCCc
Q 010138 130 DISWPTEVRHVSHVTFDRFNG-FLGLPTE 157 (517)
Q Consensus 130 ~igwpt~vr~ls~it~~rf~~-~lGlP~~ 157 (517)
+|++|+..+|+.|+.|+...+ +.|+|.+
T Consensus 1 ~Is~Ptnf~H~~Hvg~d~~tG~f~Glp~e 29 (35)
T 2odb_B 1 EISAPQNFQHRVHTSFDPKEGKFVGLPPQ 29 (35)
T ss_dssp CBCCCEEEEEEEEEEEETTTTEEESCCHH
T ss_pred CCcCCCCCcCeeeeeECCCCCcccCCCHH
Confidence 589999999999999998877 7888743
No 18
>2qme_I CRIB domain of the serine/threonine-protein kinas; GTPase RAC3, small GTP binding protein, P21 RAC, RAS-related botulinum toxin substrate 3; HET: GCP; 1.75A {Homo sapiens}
Probab=78.24 E-value=0.56 Score=32.75 Aligned_cols=29 Identities=41% Similarity=0.861 Sum_probs=20.5
Q ss_pred CCCCcccccccCceehhhhcc-ccCCCCcc
Q 010138 130 DISWPTEVRHVSHVTFDRFNG-FLGLPTEL 158 (517)
Q Consensus 130 ~igwpt~vr~ls~it~~rf~~-~lGlP~~~ 158 (517)
+|++|+.++|+.|+.|+...+ +.|+|.+-
T Consensus 1 ~Is~Ptnf~H~~Hvg~d~~tG~~~glp~~W 30 (36)
T 2qme_I 1 EISLPSDFEHTIHVGFDAVTGEFTGMPEQW 30 (36)
T ss_dssp CBCCCEEEEEEEEECCBTTTTBCC------
T ss_pred CCcCCCCCCCeeEcccCCCCCcccCCCHHH
Confidence 589999999999999998777 67776543
No 19
>2ov2_I Serine/threonine-protein kinase PAK 4; GTPase RAC3, small GTP binding protein, P21 RAC, RAS-related botulinum toxin substrate 3, signalling protein; HET: GCP; 2.10A {Homo sapiens}
Probab=55.82 E-value=3.5 Score=28.40 Aligned_cols=30 Identities=37% Similarity=0.701 Sum_probs=24.4
Q ss_pred CCCCcccccccCceehhhhcc-ccCCCCccC
Q 010138 130 DISWPTEVRHVSHVTFDRFNG-FLGLPTELE 159 (517)
Q Consensus 130 ~igwpt~vr~ls~it~~rf~~-~lGlP~~~~ 159 (517)
+|+.|+..+|+.|+.|+.-.+ +.|+|.+-+
T Consensus 1 ~IS~Ptnf~H~~Hvg~d~~tg~~~Glp~eW~ 31 (35)
T 2ov2_I 1 EISAPSNFEHRVHTGFDQHEQKFTGLPRQWQ 31 (35)
T ss_dssp CBCCCEEEEEEEEEEEETTTTEEESCCGGGT
T ss_pred CCcCCCCCcCeeeeeeCCCCCcccCCCHHHH
Confidence 588999999999999997655 788886543
No 20
>1f3m_A Serine/threonine-protein kinase PAK-alpha; kinase domain, autoinhibitory fragment, homodimer, transferase; 2.30A {Homo sapiens} SCOP: j.66.1.1 PDB: 1e0a_B* 1ees_B
Probab=53.52 E-value=3.4 Score=33.85 Aligned_cols=30 Identities=40% Similarity=0.811 Sum_probs=20.0
Q ss_pred ccCCCCcccccccCceehhhhcc-ccCCCCc
Q 010138 128 SMDISWPTEVRHVSHVTFDRFNG-FLGLPTE 157 (517)
Q Consensus 128 ~~~igwpt~vr~ls~it~~rf~~-~lGlP~~ 157 (517)
.++|++|+.++|+.|+.|+...+ +.|+|.+
T Consensus 3 ~~~Is~Ptnf~H~~HVg~D~~tG~~~GlP~e 33 (80)
T 1f3m_A 3 RPEISLPSDFEHTIHVGFDAVTGEFTGMPEQ 33 (80)
T ss_dssp ------CCSSEEEEEEEEETTTTEEESCCHH
T ss_pred CCccCCCCCCCCeeecccCCCCCccCCCCHH
Confidence 46899999999999999988766 6777644
No 21
>1cee_B Wiskott-aldrich syndrome protein WAsp; CDC42 actin regulator GTPase and the GTPase binding domain of ITS effector WAsp; HET: GCP; NMR {Homo sapiens}
Probab=34.50 E-value=19 Score=27.58 Aligned_cols=27 Identities=44% Similarity=0.649 Sum_probs=21.4
Q ss_pred ccccCCCCcccccccCceehhhhcccc
Q 010138 126 EASMDISWPTEVRHVSHVTFDRFNGFL 152 (517)
Q Consensus 126 l~~~~igwpt~vr~ls~it~~rf~~~l 152 (517)
+..++|+-|+..+|+.|+-|+.-.++.
T Consensus 4 ~~k~~Is~Ptnf~Hv~HvG~d~~~gf~ 30 (59)
T 1cee_B 4 ISKADIGAPSGFKHVSHVGWDPQNGFD 30 (59)
T ss_dssp CCTTTSCCCCCCEEEEEECCCTTTCCC
T ss_pred CCCCcccCCCCCCCcceeccCCCCCcc
Confidence 456789999999999999887654433
No 22
>2p4p_A Hypothetical protein HD1797; CORC_HLYC, PFAM: PF03471, structural GE PSI-2, protein structure initiative, midwest center for STR genomics; HET: MLY MSE; 1.80A {Haemophilus ducreyi} SCOP: d.145.1.4
Probab=20.75 E-value=95 Score=24.68 Aligned_cols=48 Identities=23% Similarity=0.315 Sum_probs=35.6
Q ss_pred cCCceeccCChhHHHHHHHHHhcCCCCCCCchhhhHHHHHHHHHhCCCC
Q 010138 211 AEGIFRINAENSQEEYVRDQLNKGVVPHGIDVHCLAGLIKAWLRELPTG 259 (517)
Q Consensus 211 ~EGIFRisGs~~~I~~Lr~~Ld~g~~~~~~D~h~VAsLLK~fLReLPeP 259 (517)
.+|-|++.|.. .+..+.+.|+-..+++..+..++|+++-..|..+|..
T Consensus 7 ~dg~~~v~G~~-~l~dl~~~l~~~~l~~~~~~~Tl~G~i~~~lg~iP~~ 54 (86)
T 2p4p_A 7 NEDSWLIDGAT-PLEDVMRALNIHTFPRDENYETIGGFMMYMLRXIPXX 54 (86)
T ss_dssp CCSEEEEETTS-BHHHHHHHTTCCCSCCSCSSCBHHHHHHHHHCSCCCT
T ss_pred CCCEEEEEccC-CHHHHHHHhCCCCCCcCCCCccHHHHHHHHhCCCCCC
Confidence 57889999864 4667777776542333346889999999999999863
Done!