BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010140
(517 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 85/147 (57%), Gaps = 14/147 (9%)
Query: 340 LDDPEVVAEPINARSK--SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D + E I+ K SF GT EY+APEV++ QGH + DWW+ GV ++EML G+ PF
Sbjct: 171 LTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
Query: 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSV 456
+G++ ++T+ ILK L P+ + + Q L+ L +NP R+GS G+
Sbjct: 231 QGKDRKETMTLILKAKLGMPQFLSTEA---------QSLLRALFKRNPANRLGSGPDGAE 281
Query: 457 EIKRHEFFKGINWALI--RSIKPPEVP 481
EIKRH F+ I+W + R IKPP P
Sbjct: 282 EIKRHVFYSTIDWNKLYRREIKPPFKP 308
Score = 89.7 bits (221), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 35/183 (19%)
Query: 85 HFRLLRRLGSGDIGNVYLC-QIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
HF LL+ LG G G V+L ++ P G YAMKV+ + L +R ++ R ME+ IL
Sbjct: 29 HFELLKVLGQGSFGKVFLVRKVTRPDSG---HLYAMKVLKKATLKVRDRV-RTKMERDIL 84
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
++HPF+ L+ F+ L++++ GGDL+ ++
Sbjct: 85 ADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE-------------------- 124
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
DV +F H +GI+YRDLKPEN+L+ E+GHI L+DF
Sbjct: 125 ----VMFTEEDV------KFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDF 174
Query: 264 DLS 266
LS
Sbjct: 175 GLS 177
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 105 bits (261), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 14/159 (8%)
Query: 328 EQVDGDHHDQELLDDPEVVAEPIN--ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGV 385
E + +H L D + E I+ + +F GT EY+APE++ GH AVDWW+LG
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 386 FLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNP 445
+Y+ML G PF GEN +KT+ ILK L P ++ DL+ KLL +N
Sbjct: 210 LMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEAR---------DLLKKLLKRNA 260
Query: 446 KKRIGSLKGSV-EIKRHEFFKGINWA--LIRSIKPPEVP 481
R+G+ G E++ H FF+ INW L R ++PP P
Sbjct: 261 ASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKP 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 35/182 (19%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR--KKLHRADMEKVIL 143
F LLR LG G G V+ Q+R +AMKV+ ++A+ +R K E+ IL
Sbjct: 19 FELLRVLGKGGYGKVF--QVRKVTGANTGKIFAMKVL-KKAMIVRNAKDTAHTKAERNIL 75
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ HPF+ L F+ L++EY GG+L+ +R+ GI
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE-----GI------------- 117
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
D F+ H GI+YRDLKPEN+++ GH+ L+DF
Sbjct: 118 -------FMEDTACFY-----LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 264 DL 265
L
Sbjct: 166 GL 167
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 84/159 (52%), Gaps = 14/159 (8%)
Query: 328 EQVDGDHHDQELLDDPEVVAEPIN--ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGV 385
E + +H L D + E I+ + F GT EY+APE++ GH AVDWW+LG
Sbjct: 150 ENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGA 209
Query: 386 FLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNP 445
+Y+ML G PF GEN +KT+ ILK L P ++ DL+ KLL +N
Sbjct: 210 LMYDMLTGAPPFTGENRKKTIDKILKCKLNLPPYLTQEAR---------DLLKKLLKRNA 260
Query: 446 KKRIGSLKGSV-EIKRHEFFKGINWA--LIRSIKPPEVP 481
R+G+ G E++ H FF+ INW L R ++PP P
Sbjct: 261 ASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKP 299
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 35/182 (19%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR--KKLHRADMEKVIL 143
F LLR LG G G V+ Q+R +AMKV+ ++A+ +R K E+ IL
Sbjct: 19 FELLRVLGKGGYGKVF--QVRKVTGANTGKIFAMKVL-KKAMIVRNAKDTAHTKAERNIL 75
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ HPF+ L F+ L++EY GG+L+ +R+ GI
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLERE-----GI------------- 117
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
D F+ H GI+YRDLKPEN+++ GH+ L+DF
Sbjct: 118 -------FMEDTACFY-----LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDF 165
Query: 264 DL 265
L
Sbjct: 166 GL 167
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 340 LDDPEVVAEPINARSK--SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D + E I+ K SF GT EY+APEV++ +GH + DWW+ GV ++EML GT PF
Sbjct: 167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSV 456
+G++ ++T+ ILK L P+ + Q L+ L +NP R+G+ G
Sbjct: 227 QGKDRKETMTMILKAKLGMPQFLSPEA---------QSLLRMLFKRNPANRLGAGPDGVE 277
Query: 457 EIKRHEFFKGINWALI--RSIKPPEVP 481
EIKRH FF I+W + R I PP P
Sbjct: 278 EIKRHSFFSTIDWNKLYRREIHPPFKP 304
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
F LL+ LG G G V+L ++ + YAMKV+ + L +R ++ R ME+ IL
Sbjct: 25 QFELLKVLGQGSFGKVFL--VKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILV 81
Query: 145 MLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXX 204
++HPF+ L+ F+ L++++ GGDL+ ++
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--------------------- 120
Query: 205 XXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFD 264
DV +F H +GI+YRDLKPEN+L+ E+GHI L+DF
Sbjct: 121 ---VMFTEEDV------KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 265 LS 266
LS
Sbjct: 172 LS 173
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 340 LDDPEVVAEPINARSK--SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D + E I+ K SF GT EY+APEV++ +GH + DWW+ GV ++EML GT PF
Sbjct: 168 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
Query: 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSV 456
+G++ ++T+ ILK L P+ + Q L+ L +NP R+G+ G
Sbjct: 228 QGKDRKETMTMILKAKLGMPQFLSPEA---------QSLLRMLFKRNPANRLGAGPDGVE 278
Query: 457 EIKRHEFFKGINWALI--RSIKPPEVP 481
EIKRH FF I+W + R I PP P
Sbjct: 279 EIKRHSFFSTIDWNKLYRREIHPPFKP 305
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
F LL+ LG G G V+L ++ + YAMKV+ + L +R ++ R ME+ IL
Sbjct: 26 QFELLKVLGQGSFGKVFL--VKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILV 82
Query: 145 MLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXX 204
++HPF+ L+ F+ L++++ GGDL+ ++
Sbjct: 83 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--------------------- 121
Query: 205 XXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFD 264
DV +F H +GI+YRDLKPEN+L+ E+GHI L+DF
Sbjct: 122 ---VMFTEEDV------KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 172
Query: 265 LS 266
LS
Sbjct: 173 LS 174
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 102 bits (255), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 82/147 (55%), Gaps = 14/147 (9%)
Query: 340 LDDPEVVAEPINARSK--SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D + E I+ K SF GT EY+APEV++ +GH + DWW+ GV ++EML GT PF
Sbjct: 167 LTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
Query: 398 KGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL-KGSV 456
+G++ ++T+ ILK L P+ + Q L+ L +NP R+G+ G
Sbjct: 227 QGKDRKETMTMILKAKLGMPQFLSPEA---------QSLLRMLFKRNPANRLGAGPDGVE 277
Query: 457 EIKRHEFFKGINWALI--RSIKPPEVP 481
EIKRH FF I+W + R I PP P
Sbjct: 278 EIKRHSFFSTIDWNKLYRREIHPPFKP 304
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 85/182 (46%), Gaps = 33/182 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
F LL+ LG G G V+L ++ + YAMKV+ + L +R ++ R ME+ IL
Sbjct: 25 QFELLKVLGQGSFGKVFL--VKKISGSDARQLYAMKVLKKATLKVRDRV-RTKMERDILV 81
Query: 145 MLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXX 204
++HPF+ L+ F+ L++++ GGDL+ ++
Sbjct: 82 EVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--------------------- 120
Query: 205 XXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFD 264
DV +F H +GI+YRDLKPEN+L+ E+GHI L+DF
Sbjct: 121 ---VMFTEEDV------KFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171
Query: 265 LS 266
LS
Sbjct: 172 LS 173
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 76/142 (53%), Gaps = 17/142 (11%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
N+ + +F GT EYLAPEV+ Q + VDWW LG LYEMLYG PF N + NIL
Sbjct: 193 NSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNIL 252
Query: 411 KKPLTF-PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 469
KPL P I S+ + L+ LL K+ KR+G+ +EIK H FF INW
Sbjct: 253 NKPLQLKPNITNSA----------RHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINW 302
Query: 470 --ALIRSIKPPEVPN----NDL 485
+ + I PP PN NDL
Sbjct: 303 DDLINKKITPPFNPNVSGPNDL 324
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 81/181 (44%), Gaps = 36/181 (19%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKK-LHRADMEKVILT 144
F L+ +G G G V L + + + FYA+KV+ ++A+ +K+ H V+L
Sbjct: 40 FHFLKVIGKGSFGKVLLARHK-----AEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLK 94
Query: 145 MLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXX 204
+ HPFL L+ F+ + V++Y GG+L+ QR+ + F A
Sbjct: 95 NVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE--RCFLEPRA----------- 141
Query: 205 XXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFD 264
RF H + IVYRDLKPEN+L+ GHI+L+DF
Sbjct: 142 -----------------RFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFG 184
Query: 265 L 265
L
Sbjct: 185 L 185
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 80/131 (61%), Gaps = 12/131 (9%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
+K F GT +Y+APE+I+ Q +G +VDWW GV LYEML G PF+GE+ ++ +I++
Sbjct: 178 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN 237
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG-SLKGSVEIKRHEFFKGINWALI 472
+ +P+ S SKE + K L+ K+P KR+G +G +IK H FF+ I+W +
Sbjct: 238 VAYPK---SMSKEAVAICK------GLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKL 288
Query: 473 --RSIKPPEVP 481
+ I+PP P
Sbjct: 289 ERKEIQPPYKP 299
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 46/192 (23%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
R+ L F L LG G G V L + + YA+K++ ++ + + +E
Sbjct: 16 RMKLTDFNFLMVLGKGSFGKVMLSERKGT-----DELYAVKILKKDVVIQDDDVECTMVE 70
Query: 140 KVILTMLDHP-FLPTLYAEFEASHYSCLVMEYCPGGDLY-----AARQRQPGKRFGISSA 193
K +L + P FL L++ F+ VMEY GGDL R ++P F
Sbjct: 71 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF----- 125
Query: 194 KXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVR 253
+ LFF GI+YRDLK +NV++
Sbjct: 126 ---------------YAAEIAIGLFF---------------LQSKGIIYRDLKLDNVMLD 155
Query: 254 EDGHIMLSDFDL 265
+GHI ++DF +
Sbjct: 156 SEGHIKIADFGM 167
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 80/131 (61%), Gaps = 12/131 (9%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
+K F GT +Y+APE+I+ Q +G +VDWW GV LYEML G PF+GE+ ++ +I++
Sbjct: 499 TKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHN 558
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG-SLKGSVEIKRHEFFKGINWALI 472
+ +P+ S SKE + K L+ K+P KR+G +G +IK H FF+ I+W +
Sbjct: 559 VAYPK---SMSKEAVAICK------GLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKL 609
Query: 473 --RSIKPPEVP 481
+ I+PP P
Sbjct: 610 ERKEIQPPYKP 620
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 76/192 (39%), Gaps = 46/192 (23%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
R+ L F L LG G G V L + + YA+K++ ++ + + +E
Sbjct: 337 RMKLTDFNFLMVLGKGSFGKVMLSERKGT-----DELYAVKILKKDVVIQDDDVECTMVE 391
Query: 140 KVILTMLDHP-FLPTLYAEFEASHYSCLVMEYCPGGDLY-----AARQRQPGKRFGISSA 193
K +L + P FL L++ F+ VMEY GGDL R ++P F
Sbjct: 392 KRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF----- 446
Query: 194 KXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVR 253
+ LFF GI+YRDLK +NV++
Sbjct: 447 ---------------YAAEIAIGLFF---------------LQSKGIIYRDLKLDNVMLD 476
Query: 254 EDGHIMLSDFDL 265
+GHI ++DF +
Sbjct: 477 SEGHIKIADFGM 488
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++EK IL
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 223
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI-GSLKGSVEIKRHEFFKGINW 469
+ + FPR +K L+S LL K+PK+R+ G + + EI +H FF GI W
Sbjct: 224 MEEIRFPRTLGPEAK---------SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 274
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 275 QHVYEKKLSPPFKPQ 289
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 36/190 (18%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
A RV ++ F L+ LG G G V L ++ G +YAMK++ +E + + ++
Sbjct: 2 AMARVTMNEFEYLKLLGKGTFGKVIL--VKEKATGR---YYAMKILKKEVIVAKDEVAHT 56
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXX 196
E +L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 57 LTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRA--- 111
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHM-MGIVYRDLKPENVLVRED 255
RF H +VYRDLK EN+++ +D
Sbjct: 112 -------------------------RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKD 146
Query: 256 GHIMLSDFDL 265
GHI ++DF L
Sbjct: 147 GHIKITDFGL 156
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++EK IL
Sbjct: 165 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 224
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI-GSLKGSVEIKRHEFFKGINW 469
+ + FPR +K L+S LL K+PK+R+ G + + EI +H FF GI W
Sbjct: 225 MEEIRFPRTLGPEAK---------SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 275
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 276 QHVYEKKLSPPFKPQ 290
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 36/187 (19%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
RV ++ F L+ LG G G V L ++ G +YAMK++ +E + + ++ E
Sbjct: 6 RVTMNEFEYLKLLGKGTFGKVIL--VKEKATGR---YYAMKILKKEVIVAKDEVAHTLTE 60
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 61 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRA------ 112
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHM-MGIVYRDLKPENVLVREDGHI 258
RF H +VYRDLK EN+++ +DGHI
Sbjct: 113 ----------------------RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 150
Query: 259 MLSDFDL 265
++DF L
Sbjct: 151 KITDFGL 157
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++EK IL
Sbjct: 163 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 222
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI-GSLKGSVEIKRHEFFKGINW 469
+ + FPR +K L+S LL K+PK+R+ G + + EI +H FF GI W
Sbjct: 223 MEEIRFPRTLGPEAK---------SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 273
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 274 QHVYEKKLSPPFKPQ 288
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 79/187 (42%), Gaps = 36/187 (19%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
RV ++ F L+ LG G G V L ++ G +YAMK++ +E + + ++ E
Sbjct: 4 RVTMNEFEYLKLLGKGTFGKVIL--VKEKATGR---YYAMKILKKEVIVAKDEVAHTLTE 58
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 59 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE--RVFSEDRA------ 110
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHM-MGIVYRDLKPENVLVREDGHI 258
RF H +VYRDLK EN+++ +DGHI
Sbjct: 111 ----------------------RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHI 148
Query: 259 MLSDFDL 265
++DF L
Sbjct: 149 KITDFGL 155
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K+F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++EK IL
Sbjct: 303 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 362
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI-GSLKGSVEIKRHEFFKGINW 469
+ + FPR +K L+S LL K+PK+R+ G + + EI +H FF GI W
Sbjct: 363 MEEIRFPRTLGPEAK---------SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 413
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 414 QHVYEKKLSPPFKPQ 428
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 64 NQAAWEAMKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD 123
N A E L + + RV ++ F L+ LG G G V L ++ G +YAMK++
Sbjct: 128 NSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVIL--VKEKATGR---YYAMKILK 182
Query: 124 REALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQ 183
+E + + ++ E +L HPFL L F+ C VMEY GG+L+ R+
Sbjct: 183 KEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE 242
Query: 184 PGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHM-MGIVY 242
+ F A RF H +VY
Sbjct: 243 --RVFSEDRA----------------------------RFYGAEIVSALDYLHSEKNVVY 272
Query: 243 RDLKPENVLVREDGHIMLSDFDL 265
RDLK EN+++ +DGHI ++DF L
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGL 295
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/135 (40%), Positives = 76/135 (56%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K+F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++EK IL
Sbjct: 306 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL 365
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI-GSLKGSVEIKRHEFFKGINW 469
+ + FPR +K L+S LL K+PK+R+ G + + EI +H FF GI W
Sbjct: 366 MEEIRFPRTLGPEAK---------SLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVW 416
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 417 QHVYEKKLSPPFKPQ 431
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 36/203 (17%)
Query: 64 NQAAWEAMKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD 123
N A E L + + RV ++ F L+ LG G G V L ++ G +YAMK++
Sbjct: 131 NSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVIL--VKEKATGR---YYAMKILK 185
Query: 124 REALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQ 183
+E + + ++ E +L HPFL L F+ C VMEY GG+L+ R+
Sbjct: 186 KEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRE 245
Query: 184 PGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHM-MGIVY 242
+ F A RF H +VY
Sbjct: 246 --RVFSEDRA----------------------------RFYGAEIVSALDYLHSEKNVVY 275
Query: 243 RDLKPENVLVREDGHIMLSDFDL 265
RDLK EN+++ +DGHI ++DF L
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGL 298
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 80/131 (61%), Gaps = 12/131 (9%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
++ F GT +Y+APE+I+ Q +G +VDWW GV LYEML G PF GE+ ++ +I++
Sbjct: 177 TREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHN 236
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG-SLKGSVEIKRHEFFKGINWALI 472
+++P+ S SKE + K L+ K+P KR+G +G +++ H FF+ I+W +
Sbjct: 237 VSYPK---SLSKEAVSICK------GLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKL 287
Query: 473 --RSIKPPEVP 481
R I+PP P
Sbjct: 288 ENREIQPPFKP 298
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 78/187 (41%), Gaps = 36/187 (19%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
RV L F L LG G G V L + + YA+K++ ++ + + +E
Sbjct: 15 RVKLTDFNFLMVLGKGSFGKVMLADRKGT-----EELYAIKILKKDVVIQDDDVECTMVE 69
Query: 140 KVILTMLDHP-FLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
K +L +LD P FL L++ F+ VMEY GGDL Q Q GK
Sbjct: 70 KRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGK------------ 116
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHI 258
+ LFF H GI+YRDLK +NV++ +GHI
Sbjct: 117 --FKEPQAVFYAAEISIGLFF---------------LHKRGIIYRDLKLDNVMLDSEGHI 159
Query: 259 MLSDFDL 265
++DF +
Sbjct: 160 KIADFGM 166
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 84/142 (59%), Gaps = 17/142 (11%)
Query: 344 EVVAEPINARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPF--KG 399
E VA+ R+ F GT EY+AP+++ G GH AVDWW+LGV +YE+L G +PF G
Sbjct: 208 EFVADE-TERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDG 266
Query: 400 ENNEKTLIN--ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG-SLKGSV 456
E N + I+ ILK +P +E + K DLI +LL+K+PKKR+G + +
Sbjct: 267 EKNSQAEISRRILKSEPPYP-------QEMSALAK--DLIQRLLMKDPKKRLGCGPRDAD 317
Query: 457 EIKRHEFFKGINWALIRSIKPP 478
EIK H FF+ INW + + K P
Sbjct: 318 EIKEHLFFQKINWDDLAAKKVP 339
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 36/190 (18%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLC-QIRNPMVGLPQCFYAMKVVDREALAIRKKL--HRA 136
+VG+++F LL+ LG+G G V+L +I G YAMKV+ + + + K H
Sbjct: 50 KVGIENFELLKVLGTGAYGKVFLVRKISGHDTG---KLYAMKVLKKATIVQKAKTTEHTR 106
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXX 196
+V+ + PFL TL+ F+ L+++Y GG+L+ ++ +RF +
Sbjct: 107 TERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIY 164
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
++ L + H +GI+YRD+K EN+L+ +G
Sbjct: 165 V---------------GEIVLALEH-------------LHKLGIIYRDIKLENILLDSNG 196
Query: 257 HIMLSDFDLS 266
H++L+DF LS
Sbjct: 197 HVVLTDFGLS 206
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 79/133 (59%), Gaps = 14/133 (10%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
+A++ F GT +Y+APE++ GQ + +VDWW+ GV LYEML G +PF G++ E+ +I
Sbjct: 173 DAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 232
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 470
+PR +K DL+ KL V+ P+KR+G ++G +I++H F+ INW
Sbjct: 233 MDNPFYPRWLEKEAK---------DLLVKLFVREPEKRLG-VRG--DIRQHPLFREINWE 280
Query: 471 LI--RSIKPPEVP 481
+ + I PP P
Sbjct: 281 ELERKEIDPPFRP 293
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 36/189 (19%)
Query: 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRAD 137
Q ++ ++ F L + LG G G V+L + + F+A+K + ++ + + +
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKT-----NQFFAIKALKKDVVLMDDDVECTM 66
Query: 138 MEKVILTM-LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXX 196
+EK +L++ +HPFL ++ F+ VMEY GGDL Q +F +S A
Sbjct: 67 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRAT-- 122
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
F H GIVYRDLK +N+L+ +DG
Sbjct: 123 --------------------------FYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG 156
Query: 257 HIMLSDFDL 265
HI ++DF +
Sbjct: 157 HIKIADFGM 165
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 79/133 (59%), Gaps = 14/133 (10%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
+A++ F GT +Y+APE++ GQ + +VDWW+ GV LYEML G +PF G++ E+ +I
Sbjct: 172 DAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIR 231
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWA 470
+PR +K DL+ KL V+ P+KR+G ++G +I++H F+ INW
Sbjct: 232 MDNPFYPRWLEKEAK---------DLLVKLFVREPEKRLG-VRG--DIRQHPLFREINWE 279
Query: 471 LI--RSIKPPEVP 481
+ + I PP P
Sbjct: 280 ELERKEIDPPFRP 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 83/189 (43%), Gaps = 36/189 (19%)
Query: 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRAD 137
Q ++ ++ F L + LG G G V+L + + F+A+K + ++ + + +
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKT-----NQFFAIKALKKDVVLMDDDVECTM 65
Query: 138 MEKVILTM-LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXX 196
+EK +L++ +HPFL ++ F+ VMEY GGDL Q +F +S A
Sbjct: 66 VEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDL--MYHIQSCHKFDLSRAT-- 121
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
F H GIVYRDLK +N+L+ +DG
Sbjct: 122 --------------------------FYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG 155
Query: 257 HIMLSDFDL 265
HI ++DF +
Sbjct: 156 HIKIADFGM 164
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K+F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++E+ IL
Sbjct: 162 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 221
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFKGINW 469
+ + FPR +K L++ LL K+PK+R+G E+ H FF INW
Sbjct: 222 MEEIRFPRTLSPEAKS---------LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 272
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 273 QDVVQKKLLPPFKPQ 287
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 81/189 (42%), Gaps = 35/189 (18%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
A+ +V ++ F L+ LG G G V L +R G +YAMK++ +E + + ++
Sbjct: 1 ARAKVTMNDFDYLKLLGKGTFGKVIL--VREKATGR---YYAMKILRKEVIIAKDEVAHT 55
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXX 196
E +L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERA--- 110
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
RF H +VYRD+K EN+++ +DG
Sbjct: 111 -------------------------RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDG 145
Query: 257 HIMLSDFDL 265
HI ++DF L
Sbjct: 146 HIKITDFGL 154
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K+F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++E+ IL
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFKGINW 469
+ + FPR +K L++ LL K+PK+R+G E+ H FF INW
Sbjct: 219 MEEIRFPRTLSPEAKS---------LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 270 QDVVQKKLLPPFKPQ 284
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
+V ++ F L+ LG G G V L +R G +YAMK++ +E + + ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL--VREKATGR---YYAMKILRKEVIIAKDEVAHTVTE 55
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERA------ 107
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
RF H +VYRD+K EN+++ +DGHI
Sbjct: 108 ----------------------RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 260 LSDFDL 265
++DF L
Sbjct: 146 ITDFGL 151
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 94.7 bits (234), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K+F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++E+ IL
Sbjct: 159 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFKGINW 469
+ + FPR +K L++ LL K+PK+R+G E+ H FF INW
Sbjct: 219 MEEIRFPRTLSPEAKS---------LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 270 QDVVQKKLLPPFKPQ 284
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
+V ++ F L+ LG G G V L +R G +YAMK++ +E + + ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL--VREKATGR---YYAMKILRKEVIIAKDEVAHTVTE 55
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERA------ 107
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
RF H +VYRD+K EN+++ +DGHI
Sbjct: 108 ----------------------RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 260 LSDFDL 265
++DF L
Sbjct: 146 ITDFGL 151
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++E+ IL
Sbjct: 164 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 223
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFKGINW 469
+ + FPR +K L++ LL K+PK+R+G E+ H FF INW
Sbjct: 224 MEEIRFPRTLSPEAKS---------LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 274
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 275 QDVVQKKLLPPFKPQ 289
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
+V ++ F L+ LG G G V L +R G +YAMK++ +E + + ++ E
Sbjct: 6 KVTMNDFDYLKLLGKGTFGKVIL--VREKATGR---YYAMKILRKEVIIAKDEVAHTVTE 60
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 61 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERA------ 112
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
RF H +VYRD+K EN+++ +DGHI
Sbjct: 113 ----------------------RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 150
Query: 260 LSDFDL 265
++DF L
Sbjct: 151 ITDFGL 156
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++E+ IL
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFKGINW 469
+ + FPR +K L++ LL K+PK+R+G E+ H FF INW
Sbjct: 219 MEEIRFPRTLSPEAKS---------LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 270 QDVVQKKLLPPFKPQ 284
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
+V ++ F L+ LG G G V L +R G +YAMK++ +E + + ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL--VREKATGR---YYAMKILRKEVIIAKDEVAHTVTE 55
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERA------ 107
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
RF H +VYRD+K EN+++ +DGHI
Sbjct: 108 ----------------------RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 260 LSDFDL 265
++DF L
Sbjct: 146 ITDFGL 151
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++E+ IL
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFKGINW 469
+ + FPR +K L++ LL K+PK+R+G E+ H FF INW
Sbjct: 219 MEEIRFPRTLSPEAKS---------LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 270 QDVVQKKLLPPFKPQ 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
+V ++ F L+ LG G G V L +R G +YAMK++ +E + + ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL--VREKATGR---YYAMKILRKEVIIAKDEVAHTVTE 55
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERA------ 107
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
RF H +VYRD+K EN+++ +DGHI
Sbjct: 108 ----------------------RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 260 LSDFDL 265
++DF L
Sbjct: 146 ITDFGL 151
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
A K F GT EYLAPEV+ +G AVDWW LGV +YEM+ G PF +++E+ IL
Sbjct: 159 GATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL 218
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFKGINW 469
+ + FPR +K L++ LL K+PK+R+G E+ H FF INW
Sbjct: 219 MEEIRFPRTLSPEAKS---------LLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINW 269
Query: 470 ALI--RSIKPPEVPN 482
+ + + PP P
Sbjct: 270 QDVVQKKLLPPFKPQ 284
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 79/186 (42%), Gaps = 35/186 (18%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
+V ++ F L+ LG G G V L +R G +YAMK++ +E + + ++ E
Sbjct: 1 KVTMNDFDYLKLLGKGTFGKVIL--VREKATGR---YYAMKILRKEVIIAKDEVAHTVTE 55
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+L HPFL L F+ C VMEY GG+L+ R+ + F A
Sbjct: 56 SRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRE--RVFTEERA------ 107
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
RF H +VYRD+K EN+++ +DGHI
Sbjct: 108 ----------------------RFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIK 145
Query: 260 LSDFDL 265
++DF L
Sbjct: 146 ITDFGL 151
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 77/155 (49%), Gaps = 15/155 (9%)
Query: 333 DHHDQELLDDPEVVAEPI--NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEM 390
DH L D + E I + +F GT +Y+APE++ +G AVDWW +GV LYEM
Sbjct: 158 DHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEM 217
Query: 391 LYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG 450
L G PF+ EN + IL + +P + ++ + KNP R+G
Sbjct: 218 LCGHAPFEAENEDDLFEAILNDEVVYPTWLHEDAT---------GILKSFMTKNPTMRLG 268
Query: 451 SLK--GSVEIKRHEFFKGINWALI--RSIKPPEVP 481
SL G I RH FFK I+WA + R I+PP P
Sbjct: 269 SLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRP 303
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 83/190 (43%), Gaps = 36/190 (18%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+ R+G+D+F +R LG G G V L +++ YA+KV+ ++ + +
Sbjct: 16 SSNRLGIDNFEFIRVLGKGSFGKVMLARVKE-----TGDLYAVKVLKKDVILQDDDVECT 70
Query: 137 DMEKVILTML-DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKX 195
EK IL++ +HPFL L+ F+ VME+ GGDL Q+ +RF + A
Sbjct: 71 MTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKS--RRFDEARA-- 126
Query: 196 XXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRED 255
RF H GI+YRDLK +NVL+ +
Sbjct: 127 --------------------------RFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHE 160
Query: 256 GHIMLSDFDL 265
GH L+DF +
Sbjct: 161 GHCKLADFGM 170
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 92.4 bits (228), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/126 (39%), Positives = 76/126 (60%), Gaps = 12/126 (9%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
GT +Y+APEV+S + + ++DWW+ G+ +YEML G TPF N KT IL L FP
Sbjct: 165 GTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP 224
Query: 419 IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK-GSVEIKRHEFFKGINWA--LIRSI 475
F E VK DL+S+L+ ++ +R+G+L+ G+ ++K H +FK + W L R+I
Sbjct: 225 F-------FNEDVK--DLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNI 275
Query: 476 KPPEVP 481
+ P P
Sbjct: 276 ETPYEP 281
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 95/187 (50%), Gaps = 35/187 (18%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
+ L F++LR LG+G G V+L + R+ +YAMKV+ +E + K++ + E
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHN-----GRYYAMKVLKKEIVVRLKQVEHTNDE 56
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+++L+++ HPF+ ++ F+ + ++M+Y GG+L++ ++ +RF AK
Sbjct: 57 RLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK--SQRFPNPVAKFYA-- 112
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
+V L Y H I+YRDLKPEN+L+ ++GHI
Sbjct: 113 -------------AEVCLALEY-------------LHSKDIIYRDLKPENILLDKNGHIK 146
Query: 260 LSDFDLS 266
++DF +
Sbjct: 147 ITDFGFA 153
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 78/142 (54%), Gaps = 22/142 (15%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK--------GENNEKT 405
+ F GT Y+APE++ G+ +G +VDWW LGV ++EM+ G +PF +N E
Sbjct: 178 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 237
Query: 406 LIN-ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSL--KGSVEIKRHE 462
L IL+K + PR S S VK ++ L K+PK+R+G L G +I+ H
Sbjct: 238 LFQVILEKQIRIPR---SMS------VKAASVLKSFLNKDPKERLGCLPQTGFADIQGHP 288
Query: 463 FFKGINWALI--RSIKPPEVPN 482
FF+ ++W ++ + + PP PN
Sbjct: 289 FFRNVDWDMMEQKQVVPPFKPN 310
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 85/194 (43%), Gaps = 42/194 (21%)
Query: 76 RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHR 135
+A +GL F LLR +G G V L +++ YAMKVV +E + + +
Sbjct: 12 KASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKT-----DRIYAMKVVKKELVNDDEDIDW 66
Query: 136 ADMEK-VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQ---PGKRFGIS 191
EK V +HPFL L++ F+ V+EY GGDL QRQ P +
Sbjct: 67 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 126
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
SA +++L NY H GI+YRDLK +NVL
Sbjct: 127 SA--------------------EISLALNY-------------LHERGIIYRDLKLDNVL 153
Query: 252 VREDGHIMLSDFDL 265
+ +GHI L+D+ +
Sbjct: 154 LDSEGHIKLTDYGM 167
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 15/139 (10%)
Query: 351 NARSKSFVGTHEYLAPEVI----SGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT 405
+S VGT +Y++PE++ G G +G DWW+LGV +YEMLYG TPF E+ +T
Sbjct: 230 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 406 LINIL--KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463
I+ ++ FP S+E +DLI +L+ ++R+G G + K+H F
Sbjct: 290 YGKIMNHEERFQFPSHVTDVSEE------AKDLIQRLICSR-ERRLGQ-NGIEDFKKHAF 341
Query: 464 FKGINWALIRSIKPPEVPN 482
F+G+NW IR+++ P +P+
Sbjct: 342 FEGLNWENIRNLEAPYIPD 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 34/185 (18%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F +++ +G G G V + +++N + YAMK++++ + R + E+ +L
Sbjct: 74 EDFEIIKVIGRGAFGEVAVVKMKNT-----ERIYAMKILNKWEMLKRAETACFREERDVL 128
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
D ++ L+ F+ ++ LVM+Y GGDL + K
Sbjct: 129 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK----------------- 171
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
D+ RF H + V+RD+KP+NVL+ +GHI L+DF
Sbjct: 172 -------LPEDMA-----RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADF 219
Query: 264 DLSFK 268
K
Sbjct: 220 GSCLK 224
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 80/139 (57%), Gaps = 15/139 (10%)
Query: 351 NARSKSFVGTHEYLAPEVI----SGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT 405
+S VGT +Y++PE++ G G +G DWW+LGV +YEMLYG TPF E+ +T
Sbjct: 246 TVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVET 305
Query: 406 LINIL--KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEF 463
I+ ++ FP S+E +DLI +L+ ++R+G G + K+H F
Sbjct: 306 YGKIMNHEERFQFPSHVTDVSEE------AKDLIQRLICSR-ERRLGQ-NGIEDFKKHAF 357
Query: 464 FKGINWALIRSIKPPEVPN 482
F+G+NW IR+++ P +P+
Sbjct: 358 FEGLNWENIRNLEAPYIPD 376
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 34/185 (18%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F +++ +G G G V + +++N + YAMK++++ + R + E+ +L
Sbjct: 90 EDFEIIKVIGRGAFGEVAVVKMKNT-----ERIYAMKILNKWEMLKRAETACFREERDVL 144
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
D ++ L+ F+ ++ LVM+Y GGDL + K
Sbjct: 145 VNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDK----------------- 187
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
D+ RF H + V+RD+KP+NVL+ +GHI L+DF
Sbjct: 188 -------LPEDMA-----RFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHIRLADF 235
Query: 264 DLSFK 268
K
Sbjct: 236 GSCLK 240
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 78/142 (54%), Gaps = 22/142 (15%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK--------GENNEKT 405
+ +F GT Y+APE++ G+ +G +VDWW LGV ++EM+ G +PF +N E
Sbjct: 210 TSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 269
Query: 406 LIN-ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS--LKGSVEIKRHE 462
L IL+K + PR S S VK ++ L K+PK+R+G G +I+ H
Sbjct: 270 LFQVILEKQIRIPR---SLS------VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 320
Query: 463 FFKGINWALI--RSIKPPEVPN 482
FF+ ++W ++ + + PP PN
Sbjct: 321 FFRNVDWDMMEQKQVVPPFKPN 342
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 85/194 (43%), Gaps = 42/194 (21%)
Query: 76 RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHR 135
+A +GL F LLR +G G V L +++ YAM+VV +E + + +
Sbjct: 44 KASSSLGLQDFDLLRVIGRGSYAKVLLVRLKKT-----DRIYAMRVVKKELVNDDEDIDW 98
Query: 136 ADMEK-VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQ---PGKRFGIS 191
EK V +HPFL L++ F+ V+EY GGDL QRQ P +
Sbjct: 99 VQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFY 158
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
SA +++L NY H GI+YRDLK +NVL
Sbjct: 159 SA--------------------EISLALNY-------------LHERGIIYRDLKLDNVL 185
Query: 252 VREDGHIMLSDFDL 265
+ +GHI L+D+ +
Sbjct: 186 LDSEGHIKLTDYGM 199
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ + GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIQVTDFGFA 189
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ + GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 174 AKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 233
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 234 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 284
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 285 TTDWIAIYQRKVEAPFIP 302
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 20 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 74
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 75 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 134
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 135 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 159
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 160 IDQQGYIQVTDFGFA 174
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT 405
+A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 406 LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFF 464
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 247 YEKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
Query: 465 KGINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 298 ATTDWIAIYQRKVEAPFIP 316
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKEIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLM 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF L+
Sbjct: 174 IDQQGYIQVTDFGLA 188
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA-----ARQRQPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 73/139 (52%), Gaps = 12/139 (8%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKT 405
+A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 187 LAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQI 246
Query: 406 LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFF 464
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 247 YEKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297
Query: 465 KGINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 298 ATTDWIAIYQRKVEAPFIP 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKEIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLM 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF L+
Sbjct: 174 IDQQGYIKVTDFGLA 188
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 22/142 (15%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK--------GENNEKT 405
+ F GT Y+APE++ G+ +G +VDWW LGV ++EM+ G +PF +N E
Sbjct: 163 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 222
Query: 406 LIN-ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS--LKGSVEIKRHE 462
L IL+K + PR S S VK ++ L K+PK+R+G G +I+ H
Sbjct: 223 LFQVILEKQIRIPR---SLS------VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 273
Query: 463 FFKGINWALI--RSIKPPEVPN 482
FF+ ++W ++ + + PP PN
Sbjct: 274 FFRNVDWDMMEQKQVVPPFKPN 295
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 42/189 (22%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
+GL F LLR +G G V L +++ YAMKVV +E + + + EK
Sbjct: 2 LGLQDFDLLRVIGRGSYAKVLLVRLKKT-----DRIYAMKVVKKELVNDDEDIDWVQTEK 56
Query: 141 VILTML-DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQ---PGKRFGISSAKXX 196
+ +HPFL L++ F+ V+EY GGDL QRQ P + SA
Sbjct: 57 HVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSA--- 113
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
+++L NY H GI+YRDLK +NVL+ +G
Sbjct: 114 -----------------EISLALNY-------------LHERGIIYRDLKLDNVLLDSEG 143
Query: 257 HIMLSDFDL 265
HI L+D+ +
Sbjct: 144 HIKLTDYGM 152
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 241 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 291
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 292 TTDWIAIYQRKVEAPFIP 309
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 27 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHYAMKILDKQKVVKLKQIEHT 81
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 141
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 142 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 166
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 167 IDQQGYIQVTDFGFA 181
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 181 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 240
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 241 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 291
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 292 TTDWIAIYQRKVEAPFIP 309
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 27 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHYAMKILDKQKVVKLKQIEHT 81
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 82 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 141
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 142 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 166
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 167 IDQQGYIQVTDFGFA 181
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ +G+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGGD+++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIKVADFGFA 188
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 22/142 (15%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK--------GENNEKT 405
+ F GT Y+APE++ G+ +G +VDWW LGV ++EM+ G +PF +N E
Sbjct: 167 TSXFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226
Query: 406 LIN-ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS--LKGSVEIKRHE 462
L IL+K + PR S S VK ++ L K+PK+R+G G +I+ H
Sbjct: 227 LFQVILEKQIRIPR---SLS------VKAASVLKSFLNKDPKERLGCHPQTGFADIQGHP 277
Query: 463 FFKGINWALI--RSIKPPEVPN 482
FF+ ++W ++ + + PP PN
Sbjct: 278 FFRNVDWDMMEQKQVVPPFKPN 299
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 42/193 (21%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
A +GL F LLR +G G V L +++ YAMKVV +E + + +
Sbjct: 2 AMDPLGLQDFDLLRVIGRGSYAKVLLVRLKKT-----DRIYAMKVVKKELVNDDEDIDWV 56
Query: 137 DMEKVILTML-DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQ---PGKRFGISS 192
EK + +HPFL L++ F+ V+EY GGDL QRQ P + S
Sbjct: 57 QTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYS 116
Query: 193 AKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV 252
A+ ++L NY H GI+YRDLK +NVL+
Sbjct: 117 AE--------------------ISLALNY-------------LHERGIIYRDLKLDNVLL 143
Query: 253 REDGHIMLSDFDL 265
+GHI L+D+ +
Sbjct: 144 DSEGHIKLTDYGM 156
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 175 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 234
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 235 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 285
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 286 TTDWIAIYQRKVEAPFIP 303
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 21 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 75
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 76 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 135
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 136 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 160
Query: 252 VREDGHIMLSDFDLS 266
+ E G+I ++DF +
Sbjct: 161 IDEQGYIQVTDFGFA 175
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 183 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 242
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 243 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 293
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 294 TTDWIAIYQRKVEAPFIP 311
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 29 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 83
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 84 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 143
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 144 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 168
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 169 IDQQGYIQVTDFGFA 183
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 86/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA-----ARQRQPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ R +P RF
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 146 -------------------YAAQIVLTFEY-------------LHSLDLIYRDLKPENLI 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ +G+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGGD+++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIKVADFGFA 188
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 35 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA-----ARQRQPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIQVTDFGFA 189
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIQVTDFGFA 189
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIQVTDFGFA 189
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLM 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIKVTDFGFA 189
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLM 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIKVTDFGFA 189
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLM 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIKVTDFGFA 188
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F +R LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIRTLGTGSFGRVML--VKHKETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK I ++ PFL L F+ + +V+EY PGG++++ +R +P RF +
Sbjct: 90 LNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIKVADFGFA 189
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLM 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIKVTDFGFA 189
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLM 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIKVTDFGFA 189
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLM 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ +G+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTIGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIKVADFGFA 188
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN++
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLM 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIKVTDFGFA 188
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G +AMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHFAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 269 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 319
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 320 TTDWIAIYQRKVEAPFIP 337
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 55 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 109
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARF--- 166
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 167 -------------------YAAQIVLTFEY-------------LHSLDLIYRDLKPENLL 194
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 195 IDQQGYIQVTDFGFA 209
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIQVTDFGFA 189
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA-----ARQRQPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIQVTDFGFA 189
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADEPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 209 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 269 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 319
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 320 TTDWIAIYQRKVEAPFIP 337
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 89/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 55 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHYAMKILDKQKVVKLKQIEHT 109
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA-----ARQRQPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ R +P RF
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARF--- 166
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 167 -------------------YAAQIVLTFEY-------------LHSLDLIYRDLKPENLL 194
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 195 IDQQGYIQVTDFGFA 209
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 90/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHMETG---NHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G +AMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHFAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G +AMK++D++ + K++
Sbjct: 34 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHFAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +Y+M G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 88/195 (45%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF +
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAA 148
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 149 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + + + GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 209 AKRVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 268
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 269 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 319
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 320 TTDWIAIYQRKVEAPFIP 337
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 55 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 109
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA-----ARQRQPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ R +P RF
Sbjct: 110 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 166
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 167 -------------------YAAQIVLTFEY-------------LHSLDLIYRDLKPENLL 194
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 195 IDQQGYIQVTDFGFA 209
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 189 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 248
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +I H++F
Sbjct: 249 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFA 299
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 300 TTDWIAIYQRKVEAPFIP 317
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 91/195 (46%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
AQ LD F ++ LG+G G V L +++ G YAMK++D++ + K++
Sbjct: 35 AQNTAHLDQFERIKTLGTGSFGRVML--VKHKETG---NHYAMKILDKQKVVKLKQIEHT 89
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY PGG++++ +R +P RF +
Sbjct: 90 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAA 149
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 150 Q----------------------IVLTFEY-------------LHSLDLIYRDLKPENLL 174
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 175 IDQQGYIQVTDFGFA 189
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 78/143 (54%), Gaps = 15/143 (10%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVI----SGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGE 400
+ E +S VGT +Y++PE++ G+G +G DWW+LGV +YEMLYG TPF E
Sbjct: 225 LMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAE 284
Query: 401 NNEKTLINIL--KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEI 458
+ +T I+ K+ FP S+ +DLI +L+ + R+G G +
Sbjct: 285 SLVETYGKIMNHKERFQFPTQVTDVSE------NAKDLIRRLICSR-EHRLGQ-NGIEDF 336
Query: 459 KRHEFFKGINWALIRSIKPPEVP 481
K+H FF GI+W IR+ + P +P
Sbjct: 337 KKHPFFSGIDWDNIRNCEAPYIP 359
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 42/195 (21%)
Query: 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRAD 137
Q R+ + F +L+ +G G G V + +++N +AMK++++ + R +
Sbjct: 68 QMRLHREDFEILKVIGRGAFGEVAVVKLKNA-----DKVFAMKILNKWEMLKRAETACFR 122
Query: 138 MEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAA----RQRQPGKRFGISSA 193
E+ +L D ++ TL+ F+ + LVM+Y GGDL R P +
Sbjct: 123 EERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEM------ 176
Query: 194 KXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVR 253
RF H + V+RD+KP+N+L+
Sbjct: 177 ---------------------------ARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
Query: 254 EDGHIMLSDFDLSFK 268
+GHI L+DF K
Sbjct: 210 MNGHIRLADFGSCLK 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.8 bits (203), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAP +I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA-----ARQRQPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ R +P RF
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 146 -------------------YAAQIVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+L V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 87/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR-----QPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ +R +P RF
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 146 -------------------YAAQIVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT EYLAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + K G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA-----ARQRQPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ R +P RF
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 146 -------------------YAAQIVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 74/139 (53%), Gaps = 17/139 (12%)
Query: 352 ARSKSFVGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
R + VGT +Y++PEV+ QG +G DWW++GVFLYEML G TPF ++ T
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 408 NIL--KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
I+ K LTFP SKE ++LI L + + R+G G EIKRH FFK
Sbjct: 289 KIMNHKNSLTFPDDN-DISKE------AKNLICAFLT-DREVRLGR-NGVEEIKRHLFFK 339
Query: 466 GINWAL--IRSIKPPEVPN 482
WA +R P VP+
Sbjct: 340 NDQWAWETLRDTVAPVVPD 358
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 50/198 (25%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
R+ + + +++ +G G G V L + ++ + YAMK++ + + R E
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKST-----RKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+ I+ + P++ L+ F+ Y +VMEY PGGDL
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL----------------------- 161
Query: 200 XXXXXXXXXXXXHTDVTLFFNY-------RFXXXXXXXXXXXXHMMGIVYRDLKPENVLV 252
V L NY RF H MG ++RD+KP+N+L+
Sbjct: 162 ---------------VNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 206
Query: 253 REDGHIMLSDFDLSFKCD 270
+ GH+ L+DF K +
Sbjct: 207 DKSGHLKLADFGTCMKMN 224
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 74/139 (53%), Gaps = 17/139 (12%)
Query: 352 ARSKSFVGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
R + VGT +Y++PEV+ QG +G DWW++GVFLYEML G TPF ++ T
Sbjct: 224 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 283
Query: 408 NIL--KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
I+ K LTFP SKE ++LI L + + R+G G EIKRH FFK
Sbjct: 284 KIMNHKNSLTFPDDN-DISKE------AKNLICAFLT-DREVRLGR-NGVEEIKRHLFFK 334
Query: 466 GINWAL--IRSIKPPEVPN 482
WA +R P VP+
Sbjct: 335 NDQWAWETLRDTVAPVVPD 353
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 50/198 (25%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
R+ + + +++ +G G G V L + ++ + YAMK++ + + R E
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKST-----RKVYAMKLLSKFEMIKRSDSAFFWEE 119
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+ I+ + P++ L+ F+ Y +VMEY PGGDL
Sbjct: 120 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL----------------------- 156
Query: 200 XXXXXXXXXXXXHTDVTLFFNY-------RFXXXXXXXXXXXXHMMGIVYRDLKPENVLV 252
V L NY RF H MG ++RD+KP+N+L+
Sbjct: 157 ---------------VNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201
Query: 253 REDGHIMLSDFDLSFKCD 270
+ GH+ L+DF K +
Sbjct: 202 DKSGHLKLADFGTCMKMN 219
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 74/139 (53%), Gaps = 17/139 (12%)
Query: 352 ARSKSFVGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
R + VGT +Y++PEV+ QG +G DWW++GVFLYEML G TPF ++ T
Sbjct: 229 VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYS 288
Query: 408 NIL--KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
I+ K LTFP SKE ++LI L + + R+G G EIKRH FFK
Sbjct: 289 KIMNHKNSLTFPDDN-DISKE------AKNLICAFLT-DREVRLGR-NGVEEIKRHLFFK 339
Query: 466 GINWAL--IRSIKPPEVPN 482
WA +R P VP+
Sbjct: 340 NDQWAWETLRDTVAPVVPD 358
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 50/198 (25%)
Query: 80 RVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
R+ + + +++ +G G G V L + ++ + YAMK++ + + R E
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKST-----RKVYAMKLLSKFEMIKRSDSAFFWEE 124
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
+ I+ + P++ L+ F+ Y +VMEY PGGDL
Sbjct: 125 RDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL----------------------- 161
Query: 200 XXXXXXXXXXXXHTDVTLFFNY-------RFXXXXXXXXXXXXHMMGIVYRDLKPENVLV 252
V L NY RF H MG ++RD+KP+N+L+
Sbjct: 162 ---------------VNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 206
Query: 253 REDGHIMLSDFDLSFKCD 270
+ GH+ L+DF K +
Sbjct: 207 DKSGHLKLADFGTCMKMN 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 81.6 bits (200), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
A+ + R+ GT E LAPE+I +G+ AVDWW LGV +YEM G PF + +
Sbjct: 188 AKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIY 247
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSV-EIKRHEFFK 465
I+ + FP S L+DL+ LL + KR G+LK V +IK H++F
Sbjct: 248 EKIVSGKVRFPSHFSSD---------LKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFA 298
Query: 466 GINWALI--RSIKPPEVP 481
+W I R ++ P +P
Sbjct: 299 TTDWIAIYQRKVEAPFIP 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 86/195 (44%), Gaps = 45/195 (23%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+Q LD F ++ LG+G G V L + + YAMK++D++ + K++
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKES-----GNHYAMKILDKQKVVKLKQIEHT 88
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA-----ARQRQPGKRFGIS 191
EK IL ++ PFL L F+ + +VMEY GG++++ R +P RF
Sbjct: 89 LNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARF--- 145
Query: 192 SAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
+ L F Y H + ++YRDLKPEN+L
Sbjct: 146 -------------------YAAQIVLTFEY-------------LHSLDLIYRDLKPENLL 173
Query: 252 VREDGHIMLSDFDLS 266
+ + G+I ++DF +
Sbjct: 174 IDQQGYIQVTDFGFA 188
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ SFVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 185 ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 245 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 296 SVTWENLHQQTPPKL 310
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 87 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGCLLKYIR 124
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 125 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ SFVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 186 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 246 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 297 SVTWENLHQQTPPKL 311
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 33 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 87
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 88 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 125
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 126 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 177
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ SFVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 182 ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 242 KIIKLEYDFP------EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 293 SVTWENLHQQTPPKL 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 29 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 83
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ + Y G+L ++ I S
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCT----- 131
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 132 ------------------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 351 NARSKSFVGTHEYLAPEVISG-------QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403
RS VGT +YL+PE++ +G DWW LGVF YEM YG TPF ++
Sbjct: 217 TVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA 276
Query: 404 KTLINIL--KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461
+T I+ K+ L+ P + +E +D I +LL P+ R+G G+ + + H
Sbjct: 277 ETYGKIVHYKEHLSLPLVDEGVPEE------ARDFIQRLLCP-PETRLGR-GGAGDFRTH 328
Query: 462 EFFKGINWALIRSIKPPEVPN 482
FF G++W +R PP P+
Sbjct: 329 PFFFGLDWDGLRDSVPPFTPD 349
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 87/212 (41%), Gaps = 34/212 (16%)
Query: 57 SHKPHKANQAAWEAMKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCF 116
+ + A+ W +R + R+ D F +L+ +G G V + +++
Sbjct: 34 AQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQT-----GQV 88
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
YAMK++++ + R ++ E+ +L D ++ L+ F+ +Y LVMEY GGDL
Sbjct: 89 YAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDL 148
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXH 236
+ G+R A RF H
Sbjct: 149 LTLLSKF-GERIPAEMA----------------------------RFYLAEIVMAIDSVH 179
Query: 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 268
+G V+RD+KP+N+L+ GHI L+DF K
Sbjct: 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 71/133 (53%), Gaps = 19/133 (14%)
Query: 358 VGTHEYLAPEVISGQG----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL--K 411
VGT +Y++PEV+ QG +G DWW++GVFL+EML G TPF ++ T I+ K
Sbjct: 236 VGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHK 295
Query: 412 KPLTFPRIGVSSSKEFEEVVK-LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKG--IN 468
L FP E E+ K ++LI L + + R+G G EIK+H FFK N
Sbjct: 296 NSLCFP--------EDAEISKHAKNLICAFLT-DREVRLGR-NGVEEIKQHPFFKNDQWN 345
Query: 469 WALIRSIKPPEVP 481
W IR P VP
Sbjct: 346 WDNIRETAAPVVP 358
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 52/207 (25%)
Query: 71 MKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR 130
+K++R Q + + + +++ +G G G V L + + Q YAMK++ + + R
Sbjct: 64 VKKIRGLQMKA--EDYDVVKVIGRGAFGEVQLVRHK-----ASQKVYAMKLLSKFEMIKR 116
Query: 131 KKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGI 190
E+ I+ + P++ L+ F+ Y +VMEY PGGDL
Sbjct: 117 SDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL-------------- 162
Query: 191 SSAKXXXXXXXXXXXXXXXXXHTDVTLFFNY-------RFXXXXXXXXXXXXHMMGIVYR 243
V L NY +F H MG+++R
Sbjct: 163 ------------------------VNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHR 198
Query: 244 DLKPENVLVREDGHIMLSDFDLSFKCD 270
D+KP+N+L+ + GH+ L+DF K D
Sbjct: 199 DVKPDNMLLDKHGHLKLADFGTCMKMD 225
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 245 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 296 SVTWENLHQQTPPKL 310
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ + Y G+L ++ I S
Sbjct: 87 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCT----- 134
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 135 ------------------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ +FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 183 ESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 243 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 294 SVTWENLHQQTPPKL 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 30 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 85 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 122
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 123 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFA 244
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 245 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 296 SVTWENLHQQTPPKL 310
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 87 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 124
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 125 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 333 DHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY 392
DH + D V P K VGT Y+APEV+ + + + DWW LG LYEM+
Sbjct: 321 DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 393 GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQ--DLISKLLVKNPKKRIG 450
G +PF + +K + K R+ +E+ E Q L S+LL K+P +R+G
Sbjct: 381 GQSPF--QQRKKKI-----KREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433
Query: 451 SLKGSV-EIKRHEFFKGINWALIRS--IKPPEVPN-NDLYCK 488
GS E+K H FK +N+ + + ++PP P+ +YCK
Sbjct: 434 CRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCK 475
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V + FR R LG G G V CQ+R YA K ++++ + RK A EK
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGK-----MYACKKLEKKRIKKRKGEAMALNEK 235
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXX 200
IL ++ F+ +L +E CLV+ GGDL +F I
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL----------KFHI---------- 275
Query: 201 XXXXXXXXXXXHTDVTLFFNYR--FXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHI 258
H F R F H IVYRDLKPEN+L+ + GHI
Sbjct: 276 ----------YHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHI 325
Query: 259 MLSDFDLS 266
+SD L+
Sbjct: 326 RISDLGLA 333
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 190 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 249
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 250 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 300
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 301 SVTWENLHQQTPPKL 315
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L + YA+K++++ + K+ E+ ++
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVM 91
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 92 SRLDHPFFVKLYFCFQDDE------------KLY----------FGLSYAKNGELLKYIR 129
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 130 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 181
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 84/151 (55%), Gaps = 17/151 (11%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN----NEKTL 406
++K + GT ++APE++ G+ + +VD++ LGV LYEM+ PF+ N++
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE-IKRHEFFK 465
+L++ +T+P +SK+F E LL K+P+KR+G GS + ++ H F+
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEA---------LLQKDPEKRLGFRDGSCDGLRTHPLFR 453
Query: 466 GINWALIRS--IKPPEVPNN-DLYCKIKKKV 493
I+W + + + PP VP++ +Y K + V
Sbjct: 454 DISWRQLEAGMLTPPFVPDSRTVYAKCIQDV 484
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 39/190 (20%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
+G D F R LG G G V+ CQ++ YA K ++++ L RK A +EK
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGK-----LYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGD----LYAARQRQPGKRFGISSAKXX 196
IL + F+ +L FE CLVM GGD +Y + PG
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG----------- 285
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
+F+ + H I+YRDLKPENVL+ +DG
Sbjct: 286 --------------FQEPRAIFYTAQI-----VSGLEHLHQRNIIYRDLKPENVLLDDDG 326
Query: 257 HIMLSDFDLS 266
++ +SD L+
Sbjct: 327 NVRISDLGLA 336
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 81/162 (50%), Gaps = 13/162 (8%)
Query: 333 DHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY 392
DH + D V P K VGT Y+APEV+ + + + DWW LG LYEM+
Sbjct: 321 DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIA 380
Query: 393 GTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQ--DLISKLLVKNPKKRIG 450
G +PF + +K + K R+ +E+ E Q L S+LL K+P +R+G
Sbjct: 381 GQSPF--QQRKKKI-----KREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLG 433
Query: 451 SLKGSV-EIKRHEFFKGINWALIRS--IKPPEVPN-NDLYCK 488
GS E+K H FK +N+ + + ++PP P+ +YCK
Sbjct: 434 CRGGSAREVKEHPLFKKLNFKRLGAGMLEPPFKPDPQAIYCK 475
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 75/188 (39%), Gaps = 37/188 (19%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V + FR R LG G G V CQ+R YA K ++++ + RK A EK
Sbjct: 181 VTKNTFRQYRVLGKGGFGEVCACQVRATGK-----MYACKKLEKKRIKKRKGEAMALNEK 235
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXX 200
IL ++ F+ +L +E CLV+ GGDL +F I
Sbjct: 236 QILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDL----------KFHI---------- 275
Query: 201 XXXXXXXXXXXHTDVTLFFNYR--FXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHI 258
H F R F H IVYRDLKPEN+L+ + GHI
Sbjct: 276 ----------YHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHI 325
Query: 259 MLSDFDLS 266
+SD L+
Sbjct: 326 RISDLGLA 333
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 245 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 296 SVTWENLHQQTPPKL 310
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 87 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 124
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 125 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 243 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 294 SVTWENLHQQTPPKL 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 30 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 85 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 122
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 123 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 182 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 241
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 242 KIIKLEYDFP------EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 292
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 293 SVTWENLHQQTPPKL 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 29 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 83
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ + Y G+L ++ I S
Sbjct: 84 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCT----- 131
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 132 ------------------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 167 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 226
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 227 KIIKLEYDFP------EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 277
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 278 SVTWENLHQQTPPKL 292
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 14 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 68
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ + Y G+L ++ I S
Sbjct: 69 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCT----- 116
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 117 ------------------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 158
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 243 KIIKLEYDFP------EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 294 SVTWENLHQQTPPKL 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 30 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 84
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 85 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 122
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 123 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 183 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 242
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 243 KIIKLEYDFP------EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 293
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 294 SVTWENLHQQTPPKL 308
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 30/147 (20%)
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
YA+K++++ + K+ E+ +++ LDHPF LY F+ + Y G+L
Sbjct: 58 YAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGEL 117
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXH 236
++ I S RF H
Sbjct: 118 LKYIRK-------IGSFDETCT-----------------------RFYTAEIVSALEYLH 147
Query: 237 MMGIVYRDLKPENVLVREDGHIMLSDF 263
GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDF 174
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 161 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 220
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 221 KIIKLEYDFP------EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 271
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 272 SVTWENLHQQTPPKL 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 8 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 62
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ + Y G+L ++ I S
Sbjct: 63 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCT----- 110
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 111 ------------------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 152
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 245 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 296 SVTWENLHQQTPPKL 310
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 87 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 124
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 125 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 79/140 (56%), Gaps = 16/140 (11%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN----NEKTL 406
++K + GT ++APE++ G+ + +VD++ LGV LYEM+ PF+ N++
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE-IKRHEFFK 465
+L++ +T+P +SK+F E LL K+P+KR+G GS + ++ H F+
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEA---------LLQKDPEKRLGFRDGSCDGLRTHPLFR 453
Query: 466 GINWALIRS--IKPPEVPNN 483
I+W + + + PP VP++
Sbjct: 454 DISWRQLEAGMLTPPFVPDS 473
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 39/190 (20%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
+G D F R LG G G V+ CQ++ YA K ++++ L RK A +EK
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGK-----LYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGD----LYAARQRQPGKRFGISSAKXX 196
IL + F+ +L FE CLVM GGD +Y + PG
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG----------- 285
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
+F+ + H I+YRDLKPENVL+ +DG
Sbjct: 286 --------------FQEPRAIFYTAQI-----VSGLEHLHQRNIIYRDLKPENVLLDDDG 326
Query: 257 HIMLSDFDLS 266
++ +SD L+
Sbjct: 327 NVRISDLGLA 336
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 160 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 219
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 220 KIIKLEYDFP------EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 270
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 271 SVTWENLHQQTPPKL 285
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 7 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 61
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ + Y G+L ++ I S
Sbjct: 62 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCT----- 109
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 110 ------------------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 151
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 186 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 245
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 246 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 296
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 297 SVTWENLHQQTPPKL 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 33 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 87
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 88 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 125
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 126 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 177
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 163 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 222
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 223 KIIKLEYDFP------EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 273
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 274 SVTWENLHQQTPPKL 288
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L + YA+K++++ + K+ E+ ++
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSRE-----YAIKILEKRHIIKENKVPYVTRERDVM 64
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ + Y G+L ++ I S
Sbjct: 65 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCT----- 112
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 113 ------------------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 154
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 70/135 (51%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 185 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 244
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 245 KIIKLEYDFPE------KFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 295
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 296 SVTWENLHQQTPPKL 310
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 32 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 86
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 87 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 124
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 125 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 176
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 79/140 (56%), Gaps = 16/140 (11%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN----NEKTL 406
++K + GT ++APE++ G+ + +VD++ LGV LYEM+ PF+ N++
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE-IKRHEFFK 465
+L++ +T+P +SK+F E LL K+P+KR+G GS + ++ H F+
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEA---------LLQKDPEKRLGFRDGSCDGLRTHPLFR 453
Query: 466 GINWALIRS--IKPPEVPNN 483
I+W + + + PP VP++
Sbjct: 454 DISWRQLEAGMLTPPFVPDS 473
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 39/190 (20%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
+G D F R LG G G V+ CQ++ YA K ++++ L RK A +EK
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGK-----LYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGD----LYAARQRQPGKRFGISSAKXX 196
IL + F+ +L FE CLVM GGD +Y + PG
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG----------- 285
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
+F+ + H I+YRDLKPENVL+ +DG
Sbjct: 286 --------------FQEPRAIFYTAQI-----VSGLEHLHQRNIIYRDLKPENVLLDDDG 326
Query: 257 HIMLSDFDLS 266
++ +SD L+
Sbjct: 327 NVRISDLGLA 336
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 79/140 (56%), Gaps = 16/140 (11%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN----NEKTL 406
++K + GT ++APE++ G+ + +VD++ LGV LYEM+ PF+ N++
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELK 402
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE-IKRHEFFK 465
+L++ +T+P +SK+F E LL K+P+KR+G GS + ++ H F+
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEA---------LLQKDPEKRLGFRDGSCDGLRTHPLFR 453
Query: 466 GINWALIRS--IKPPEVPNN 483
I+W + + + PP VP++
Sbjct: 454 DISWRQLEAGMLTPPFVPDS 473
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 78/190 (41%), Gaps = 39/190 (20%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
+G D F R LG G G V+ CQ++ YA K ++++ L RK A +EK
Sbjct: 182 MGEDWFLDFRVLGRGGFGEVFACQMKATGK-----LYACKKLNKKRLKKRKGYQGAMVEK 236
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGD----LYAARQRQPGKRFGISSAKXX 196
IL + F+ +L FE CLVM GGD +Y + PG
Sbjct: 237 KILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPG----------- 285
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
+F+ + H I+YRDLKPENVL+ +DG
Sbjct: 286 --------------FQEPRAIFYTAQI-----VSGLEHLHQRNIIYRDLKPENVLLDDDG 326
Query: 257 HIMLSDFDLS 266
++ +SD L+
Sbjct: 327 NVRISDLGLA 336
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 188 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 247
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 248 KIIKLEYDFPAAFFP---------KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 298
Query: 466 GINWALIRSIKPPEV 480
+ W + PP++
Sbjct: 299 SVTWENLHQQTPPKL 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 35 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 89
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ LY FG+S AK
Sbjct: 90 SRLDHPFFVKLYFTFQDDE------------KLY----------FGLSYAKNGELLKYIR 127
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
T RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 128 KIGSFDETCT--------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 179
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 69/134 (51%), Gaps = 11/134 (8%)
Query: 348 EPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
E AR+ FVGT +Y++PE+++ + + D W LG +Y+++ G PF+ N
Sbjct: 162 ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQ 221
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG--SLKGSVEIKRHEFFK 465
I+K FP K F K +DL+ KLLV + KR+G ++G +K H FF+
Sbjct: 222 KIIKLEYDFP------EKFFP---KARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFE 272
Query: 466 GINWALIRSIKPPE 479
+ W + PP+
Sbjct: 273 SVTWENLHQQTPPK 286
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 69/180 (38%), Gaps = 35/180 (19%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ F+ + LG G V L R YA+K++++ + K+ E+ ++
Sbjct: 9 EDFKFGKILGEGSFSTVVLA--RELATSRE---YAIKILEKRHIIKENKVPYVTRERDVM 63
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
+ LDHPF LY F+ + Y G+L ++ I S
Sbjct: 64 SRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRK-------IGSFDETCT----- 111
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
RF H GI++RDLKPEN+L+ ED HI ++DF
Sbjct: 112 ------------------RFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 153
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K+ GT +YL PE+I G+ H VD W +GV YE+L G PF+ ++ +T I+K
Sbjct: 177 RRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRRIVKV 236
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
L FP + + QDLISKLL NP +R+
Sbjct: 237 DLKFPASVPTGA---------QDLISKLLRHNPSERL 264
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 5/100 (5%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+D F + R LG G GNVYL + + A+KV+ + + H+ E I
Sbjct: 22 IDDFEIGRPLGKGKFGNVYLAREKKS-----HFIVALKVLFKSQIEKEGVEHQLRREIEI 76
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR 182
L HP + LY F L++EY P G+LY Q+
Sbjct: 77 QAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQK 116
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 333 DHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEML 391
D H + D + + + + VGTH Y+APEV+ G + S+ DW++LG L+++L
Sbjct: 326 DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 392 YGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
G +PF+ ++ K I + LT + V F +L+ L+ LL ++ +R+G
Sbjct: 386 RGHSPFR-QHKTKDKHEIDRMTLT---MAVELPDSFSP--ELRSLLEGLLQRDVNRRLGC 439
Query: 452 L-KGSVEIKRHEFFKGINWALI--RSIKPPEVP 481
L +G+ E+K FF+ ++W ++ + PP +P
Sbjct: 440 LGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 40/195 (20%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
++ F + R +G G G VY C R G YAMK +D++ + +++ A E+++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGC--RKADTGK---MYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 143 LTML---DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
L+++ D PF+ + F +++ GGDL+ + G+ S
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEA----- 292
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
+ RF H +VYRDLKP N+L+ E GH+
Sbjct: 293 --------------------DMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 332
Query: 260 LSDFDLSFKCDVVPK 274
+SD L+ CD K
Sbjct: 333 ISDLGLA--CDFSKK 345
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 333 DHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEML 391
D H + D + + + + VGTH Y+APEV+ G + S+ DW++LG L+++L
Sbjct: 325 DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
Query: 392 YGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
G +PF+ ++ K I + LT + V F +L+ L+ LL ++ +R+G
Sbjct: 385 RGHSPFR-QHKTKDKHEIDRMTLT---MAVELPDSFSP--ELRSLLEGLLQRDVNRRLGC 438
Query: 452 L-KGSVEIKRHEFFKGINWALI--RSIKPPEVP 481
L +G+ E+K FF+ ++W ++ + PP +P
Sbjct: 439 LGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 471
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 40/195 (20%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
++ F + R +G G G VY C R G YAMK +D++ + +++ A E+++
Sbjct: 187 MNDFSVHRIIGRGGFGEVYGC--RKADTGK---MYAMKCLDKKRIKMKQGETLALNERIM 241
Query: 143 LTML---DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
L+++ D PF+ + F +++ GGDL+ + G+ S
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEA----- 291
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
+ RF H +VYRDLKP N+L+ E GH+
Sbjct: 292 --------------------DMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 331
Query: 260 LSDFDLSFKCDVVPK 274
+SD L+ CD K
Sbjct: 332 ISDLGLA--CDFSKK 344
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 333 DHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEML 391
D H + D + + + + VGTH Y+APEV+ G + S+ DW++LG L+++L
Sbjct: 326 DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 392 YGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
G +PF+ ++ K I + LT + V F +L+ L+ LL ++ +R+G
Sbjct: 386 RGHSPFR-QHKTKDKHEIDRMTLT---MAVELPDSFSP--ELRSLLEGLLQRDVNRRLGC 439
Query: 452 L-KGSVEIKRHEFFKGINWALI--RSIKPPEVP 481
L +G+ E+K FF+ ++W ++ + PP +P
Sbjct: 440 LGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 40/195 (20%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
++ F + R +G G G VY C R G YAMK +D++ + +++ A E+++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGC--RKADTGK---MYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 143 LTML---DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
L+++ D PF+ + F +++ GGDL+ + G+ S
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEA----- 292
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
+ RF H +VYRDLKP N+L+ E GH+
Sbjct: 293 --------------------DMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 332
Query: 260 LSDFDLSFKCDVVPK 274
+SD L+ CD K
Sbjct: 333 ISDLGLA--CDFSKK 345
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 10/153 (6%)
Query: 333 DHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEML 391
D H + D + + + + VGTH Y+APEV+ G + S+ DW++LG L+++L
Sbjct: 326 DEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 392 YGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
G +PF+ ++ K I + LT + V F +L+ L+ LL ++ +R+G
Sbjct: 386 RGHSPFR-QHKTKDKHEIDRMTLT---MAVELPDSFSP--ELRSLLEGLLQRDVNRRLGC 439
Query: 452 L-KGSVEIKRHEFFKGINWALI--RSIKPPEVP 481
L +G+ E+K FF+ ++W ++ + PP +P
Sbjct: 440 LGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIP 472
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 81/195 (41%), Gaps = 40/195 (20%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
++ F + R +G G G VY C R G YAMK +D++ + +++ A E+++
Sbjct: 188 MNDFSVHRIIGRGGFGEVYGC--RKADTGK---MYAMKCLDKKRIKMKQGETLALNERIM 242
Query: 143 LTML---DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXX 199
L+++ D PF+ + F +++ GGDL+ + G+ S
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQH-----GVFSEA----- 292
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
+ RF H +VYRDLKP N+L+ E GH+
Sbjct: 293 --------------------DMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVR 332
Query: 260 LSDFDLSFKCDVVPK 274
+SD L+ CD K
Sbjct: 333 ISDLGLA--CDFSKK 345
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 58/96 (60%), Gaps = 9/96 (9%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
+ +GT EYLAPE+++ +A D W +G+ Y +L T+PF GE+N++T +NI
Sbjct: 191 REIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNI----- 245
Query: 415 TFPRIGVSSSKE-FEEVVKL-QDLISKLLVKNPKKR 448
++ V S+E F V +L D I LLVKNP+KR
Sbjct: 246 --SQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 12/57 (21%)
Query: 236 HMMGIVYRDLKPENVLVRED---GHIMLSDFDLSFK----CDV-----VPKLLRPKL 280
H IV+ DLKP+N+L+ G I + DF +S K C++ P+ L P++
Sbjct: 148 HQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEI 204
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 223 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 251
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 63
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 109
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 110 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 262 DFDLS 266
DF S
Sbjct: 154 DFGWS 158
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 157 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 216
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 217 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 245
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 57
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 58 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 108
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 109 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 147
Query: 262 DFDLS 266
DF S
Sbjct: 148 DFGWS 152
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 223 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 251
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 63
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 114
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 115 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 262 DFDLS 266
DF S
Sbjct: 154 DFGWS 158
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 220 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 248
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 35/190 (18%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
A+ + L+ F + R LG G GNVYL + + L A+KV+ + L H+
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQL 55
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXX 196
E I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA-- 111
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
T +T N H +++RD+KPEN+L+ G
Sbjct: 112 ----------------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAG 145
Query: 257 HIMLSDFDLS 266
+ ++DF S
Sbjct: 146 ELKIADFGWS 155
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 161 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 221 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 249
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 61
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 107
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 108 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151
Query: 262 DFDLS 266
DF S
Sbjct: 152 DFGWS 156
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 159 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 218
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 219 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 247
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 59
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 60 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 110
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 111 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 149
Query: 262 DFDLS 266
DF S
Sbjct: 150 DFGWS 154
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 225 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 253
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 65
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 111
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 112 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 262 DFDLS 266
DF S
Sbjct: 156 DFGWS 160
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 165 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 225 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 253
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 65
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G++Y Q+
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK------------------- 106
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 107 -LSKFDEQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 262 DFDLS 266
DF S
Sbjct: 156 DFGWS 160
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 177 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 236
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 237 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 265
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 77
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 123
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 124 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 167
Query: 262 DFDLS 266
DF S
Sbjct: 168 DFGWS 172
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 163 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 223 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 251
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 63
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 109
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 110 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 262 DFDLS 266
DF S
Sbjct: 154 DFGWS 158
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 160 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 220 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 248
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 60
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 111
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 112 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150
Query: 262 DFDLS 266
DF S
Sbjct: 151 DFGWS 155
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 186 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 246 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 274
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 86
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 132
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 133 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 176
Query: 262 DFDLS 266
DF S
Sbjct: 177 DFGWS 181
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 162 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 222 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 250
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 62
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 108
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 109 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 152
Query: 262 DFDLS 266
+F S
Sbjct: 153 NFGWS 157
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 163 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 223 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 251
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 63
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 114
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 115 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 262 DFDLS 266
+F S
Sbjct: 154 NFGWS 158
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 223
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 224 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 252
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 64
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 115
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 116 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 154
Query: 262 DFDLS 266
DF S
Sbjct: 155 DFGWS 159
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 66/119 (55%), Gaps = 9/119 (7%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF GE ++TL NI
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY 228
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIR 473
F S++ E +D I +LLVK+PK+R+ ++ S+E H + K I +R
Sbjct: 229 DFDEEYFSNTSEL-----AKDFIRRLLVKDPKRRM-TIAQSLE---HSWIKAIRRRNVR 278
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-- 141
DH+ + LGSG V C+ + G + + A + R + R+ + R ++E+
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQK----GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 60
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ FE L++E GG+L+
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 96
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 165 SSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 225 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 253
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 65
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 116
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 117 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 262 DFDLS 266
DF S
Sbjct: 156 DFGWS 160
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 220 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 248
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 60
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 111
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 112 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150
Query: 262 DFDLS 266
DF S
Sbjct: 151 DFGWS 155
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 160 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 220 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 248
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 60
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 111
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 112 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150
Query: 262 DFDLS 266
DF S
Sbjct: 151 DFGWS 155
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 186 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 245
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 246 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 274
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 86
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 132
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 133 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 176
Query: 262 DFDLS 266
DF S
Sbjct: 177 DFGWS 181
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 51/98 (52%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 161 SSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 221 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 249
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 61
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 107
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 108 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151
Query: 262 DFDLS 266
DF S
Sbjct: 152 DFGWS 156
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 162 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 221
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 222 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 250
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 62
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 108
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 109 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 152
Query: 262 DFDLS 266
DF S
Sbjct: 153 DFGWS 157
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 160 SSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 220 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 248
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 60
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 111
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 112 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150
Query: 262 DFDLS 266
DF S
Sbjct: 151 DFGWS 155
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 161 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 220
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 221 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 249
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 61
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFD------------ 107
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 108 ------EQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 151
Query: 262 DFDLS 266
DF S
Sbjct: 152 DFGWS 156
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 165 SSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 225 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 253
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 65
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 116
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 117 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 262 DFDLS 266
DF S
Sbjct: 156 DFGWS 160
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ + T I
Sbjct: 160 SSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKRIS 219
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 220 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 248
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 79/190 (41%), Gaps = 35/190 (18%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
A+ + L+ F + R LG G GNVYL + +N L A+KV+ + L H+
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFIL-----ALKVLFKAQLEKAGVEHQL 55
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXX 196
E I + L HP + LY F S L++EY P G +Y R+ Q +F
Sbjct: 56 RREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVY--RELQKLSKFDEQRTA-- 111
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
T +T N H +++RD+KPEN+L+ G
Sbjct: 112 ----------------TYITELAN----------ALSYCHSKKVIHRDIKPENLLLGSAG 145
Query: 257 HIMLSDFDLS 266
+ ++DF S
Sbjct: 146 ELKIADFGWS 155
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 163 SSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 223 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 251
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 63
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 114
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 115 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 262 DFDLS 266
DF S
Sbjct: 154 DFGWS 158
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 163 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 222
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 223 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 251
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 63
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 114
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 115 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 153
Query: 262 DFDLS 266
DF S
Sbjct: 154 DFGWS 158
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 160 SSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 220 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 248
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 60
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 111
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 112 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150
Query: 262 DFDLS 266
DF S
Sbjct: 151 DFGWS 155
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 165 SSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 224
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 225 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 253
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 73/185 (39%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 65
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G++Y Q+
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK------------------- 106
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 107 -LSKFDEQRTATYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 155
Query: 262 DFDLS 266
DF S
Sbjct: 156 DFGWS 160
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 9/98 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 160 SSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRIS 219
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ TFP ++ DLIS+LL NP +R
Sbjct: 220 RVEFTFPDFVTEGAR---------DLISRLLKHNPSQR 248
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L+ F + R LG G GNVYL + + L A+KV+ + L H+ E
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFIL-----ALKVLFKAQLEKAGVEHQLRREVE 60
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I + L HP + LY F + L++EY P G +Y R+ Q +F
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSKFDEQRTA------- 111
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
T +T N H +++RD+KPEN+L+ G + ++
Sbjct: 112 -----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSAGELKIA 150
Query: 262 DFDLS 266
DF S
Sbjct: 151 DFGWS 155
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF GE ++TL NI
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY 235
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ E +D I +LLVK+PK+R+
Sbjct: 236 DFDEEYFSNTSEL-----AKDFIRRLLVKDPKRRM 265
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-- 141
DH+ + LGSG V C+ + G + + A + R + R+ + R ++E+
Sbjct: 12 DHYEMGEELGSGQFAIVRKCRQK----GTGKEYAAKFIKKRRLSSSRRGVSREEIEREVN 67
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ FE L++E GG+L+
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 103
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF GE ++TL NI
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNY 249
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ E +D I +LLVK+PK+R+
Sbjct: 250 DFDEEYFSNTSEL-----AKDFIRRLLVKDPKRRM 279
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 6/96 (6%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-- 141
DH+ + LGSG V C+ + G + + A + R + R+ + R ++E+
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQK----GTGKEYAAKFIKKRRLXSSRRGVSREEIEREVN 81
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ FE L++E GG+L+
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELF 117
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 164 SSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
+ TFP ++ DLIS+LL N +R+
Sbjct: 224 RVEFTFPDFVTEGAR---------DLISRLLKHNASQRL 253
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
L+ F + R LG G GNVYL + R L A+KV+ + L H+ E I
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFIL-----ALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXX 202
+ L HP + LY F + L++EY P G +Y R+ Q RF
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTA-------- 115
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSD 262
T +T N H +++RD+KPEN+L+ +G + ++D
Sbjct: 116 ----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSNGELKIAD 155
Query: 263 FDLS 266
F S
Sbjct: 156 FGWS 159
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
++R + GT +YL PE+I G+ H VD W+LGV YE L G PF+ ++T I
Sbjct: 164 SSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRIS 223
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
+ TFP ++ DLIS+LL N +R+
Sbjct: 224 RVEFTFPDFVTEGAR---------DLISRLLKHNASQRL 253
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
L+ F + R LG G GNVYL + R L A+KV+ + L H+ E I
Sbjct: 11 LEDFDIGRPLGKGKFGNVYLARERQSKFIL-----ALKVLFKTQLEKAGVEHQLRREVEI 65
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXX 202
+ L HP + LY F + L++EY P G +Y R+ Q RF
Sbjct: 66 QSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY--RELQKLSRFDEQRTA-------- 115
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSD 262
T +T N H +++RD+KPEN+L+ +G + ++D
Sbjct: 116 ----------TYITELAN----------ALSYCHSKRVIHRDIKPENLLLGSNGELKIAD 155
Query: 263 FDLS 266
F S
Sbjct: 156 FGWS 159
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R + GT +YL PE+I G+ H VD W GV YE L G PF ++ +T I+
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457
L FP SK DLISKLL +P +R+ LKG +E
Sbjct: 228 DLKFPPFLSDGSK---------DLISKLLRYHPPQRL-PLKGVME 262
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 35/184 (19%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+D F ++R LG G GNVYL + + + A+KV+ + L H+ E I
Sbjct: 13 IDDFDIVRPLGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXX 202
+ L HP + +Y F L++E+ P G+LY Q+ RF +
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFM----- 120
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSD 262
++ +Y H +++RD+KPEN+L+ G + ++D
Sbjct: 121 ----------EELADALHY-------------CHERKVIHRDIKPENLLMGYKGELKIAD 157
Query: 263 FDLS 266
F S
Sbjct: 158 FGWS 161
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R + GT +YL PE+I G+ H VD W GV YE L G PF ++ +T I+
Sbjct: 168 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 227
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457
L FP SK DLISKLL +P +R+ LKG +E
Sbjct: 228 DLKFPPFLSDGSK---------DLISKLLRYHPPQRL-PLKGVME 262
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 35/184 (19%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+D F + R LG G GNVYL + + + A+KV+ + L H+ E I
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQN-----KFIMALKVLFKSQLEKEGVEHQLRREIEI 67
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXX 202
+ L HP + +Y F L++E+ P G+LY Q+ RF +
Sbjct: 68 QSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH--GRFDEQRSATFM----- 120
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSD 262
++ +Y H +++RD+KPEN+L+ G + ++D
Sbjct: 121 ----------EELADALHY-------------CHERKVIHRDIKPENLLMGYKGELKIAD 157
Query: 263 FDLS 266
F S
Sbjct: 158 FGWS 161
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R + GT +YL PE+I G+ H VD W GV YE L G PF ++ +T I+
Sbjct: 169 RRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNV 228
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVE 457
L FP SK DLISKLL +P +R+ LKG +E
Sbjct: 229 DLKFPPFLSDGSK---------DLISKLLRYHPPQRL-PLKGVME 263
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 81/203 (39%), Gaps = 41/203 (20%)
Query: 64 NQAAWEAMKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD 123
N A E KR + +D F + R LG G GNVYL + + + A+KV+
Sbjct: 1 NTALAEMPKR------KFTIDDFDIGRPLGKGKFGNVYLAREKQN-----KFIMALKVLF 49
Query: 124 REALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQ 183
+ L H+ E I + L HP + +Y F L++E+ P G+LY Q+
Sbjct: 50 KSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH 109
Query: 184 PGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYR 243
RF + ++ +Y H +++R
Sbjct: 110 --GRFDEQRSATFM---------------EELADALHY-------------CHERKVIHR 139
Query: 244 DLKPENVLVREDGHIMLSDFDLS 266
D+KPEN+L+ G + ++DF S
Sbjct: 140 DIKPENLLMGYKGELKIADFGWS 162
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V DHF +LR +G G G V + Q + + YAMK ++++ R ++ E
Sbjct: 12 VNFDHFEILRAIGKGSFGKVCIVQKNDT-----KKMYAMKYMNKQKCVERNEVRNVFKEL 66
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXX 200
I+ L+HPFL L+ F+ +V++ GGDL Q+ F + K
Sbjct: 67 QIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQ--NVHFKEETVKLFI--- 121
Query: 201 XXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIML 260
++ + +Y I++RD+KP+N+L+ E GH+ +
Sbjct: 122 ------------CELVMALDY-------------LQNQRIIHRDMKPDNILLDEHGHVHI 156
Query: 261 SDFDLS 266
+DF+++
Sbjct: 157 TDFNIA 162
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 77/159 (48%), Gaps = 21/159 (13%)
Query: 333 DHHDQELLDDPEVVAE-PINARSKSFVGTHEYLAPEVIS---GQGHGSAVDWWTLGVFLY 388
D H + D + A P + + GT Y+APE+ S G G+ AVDWW+LGV Y
Sbjct: 149 DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY 208
Query: 389 EMLYGTTPF--KGENNEKTLINILKKP-LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNP 445
E+L G P+ + + K +++ + +T+P S +E+V L+ KLL NP
Sbjct: 209 ELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP------SAWSQEMVS---LLKKLLEPNP 259
Query: 446 KKRIGSLKGSVEIKRHEFFKGINWALI--RSIKPPEVPN 482
+R L +++ + INW + + + P +PN
Sbjct: 260 DQRFSQLS---DVQNFPYMNDINWDAVFQKRLIPGFIPN 295
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL NI
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S + E +D I KLLVK +KR+
Sbjct: 236 DFDEEFFSQTSEL-----AKDFIRKLLVKETRKRL 265
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 46/196 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D + + LGSG V C R GL YA K + R++ A R+ + R ++E+
Sbjct: 12 DFYDIGEELGSGQFAIVKKC--REKSTGLE---YAAKFIKKRQSRASRRGVCREEIEREV 66
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL--YAARQRQPGKRFGISSAKXXXX 198
IL + HP + TL+ +E L++E GG+L + A++ + S K
Sbjct: 67 SILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIK---- 122
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG-- 256
+ NY H I + DLKPEN+++ +
Sbjct: 123 ---------------QILDGVNY-------------LHTKKIAHFDLKPENIMLLDKNIP 154
Query: 257 --HIMLSDFDLSFKCD 270
HI L DF L+ + +
Sbjct: 155 IPHIKLIDFGLAHEIE 170
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL NI
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S + E +D I KLLVK +KR+
Sbjct: 236 DFDEEFFSQTSELA-----KDFIRKLLVKETRKRL 265
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 46/196 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D + + LGSG V C R GL YA K + R++ A R+ + R ++E+
Sbjct: 12 DFYDIGEELGSGQFAIVKKC--REKSTGLE---YAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL--YAARQRQPGKRFGISSAKXXXX 198
IL + H + TL+ +E L++E GG+L + A++ + S K
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG-- 256
NY H I + DLKPEN+++ +
Sbjct: 127 GV-------------------NY-------------LHTKKIAHFDLKPENIMLLDKNIP 154
Query: 257 --HIMLSDFDLSFKCD 270
HI L DF L+ + +
Sbjct: 155 IPHIKLIDFGLAHEIE 170
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL NI
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSY 235
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S + E +D I KLLVK +KR+
Sbjct: 236 DFDEEFFSQTSELA-----KDFIRKLLVKETRKRL 265
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 46/196 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D + + LGSG V C R GL YA K + R++ A R+ + R ++E+
Sbjct: 12 DFYDIGEELGSGQFAIVKKC--REKSTGLE---YAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL--YAARQRQPGKRFGISSAKXXXX 198
IL + H + TL+ +E L++E GG+L + A++ + S K
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG-- 256
NY H I + DLKPEN+++ +
Sbjct: 127 GV-------------------NY-------------LHTKKIAHFDLKPENIMLLDKNIP 154
Query: 257 --HIMLSDFDLSFKCD 270
HI L DF L+ + +
Sbjct: 155 IPHIKLIDFGLAHEIE 170
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL NI
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S + E +D I KLLVK +KR+
Sbjct: 236 DFDEEFFSHTSELA-----KDFIRKLLVKETRKRL 265
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 46/196 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D + + LGSG V C R GL YA K + R++ A R+ + R ++E+
Sbjct: 12 DFYDIGEELGSGQFAIVKKC--REKSTGLE---YAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL--YAARQRQPGKRFGISSAKXXXX 198
IL + H + TL+ +E L++E GG+L + A++ + S K
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG-- 256
NY H I + DLKPEN+++ +
Sbjct: 127 GV-------------------NY-------------LHTKKIAHFDLKPENIMLLDKNIP 154
Query: 257 --HIMLSDFDLSFKCD 270
HI L DF L+ + +
Sbjct: 155 IPHIKLIDFGLAHEIE 170
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL NI
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S + E +D I KLLVK +KR+
Sbjct: 236 DFDEEFFSHTSELA-----KDFIRKLLVKETRKRL 265
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 46/196 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D + + LGSG V C R GL YA K + R++ A R+ + R ++E+
Sbjct: 12 DFYDIGEELGSGQFAIVKKC--REKSTGLE---YAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL--YAARQRQPGKRFGISSAKXXXX 198
IL + H + TL+ +E L++E GG+L + A++ + S K
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG-- 256
NY H I + DLKPEN+++ +
Sbjct: 127 GV-------------------NY-------------LHTKKIAHFDLKPENIMLLDKNIP 154
Query: 257 --HIMLSDFDLSFKCD 270
HI L DF L+ + +
Sbjct: 155 IPHIKLIDFGLAHEIE 170
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSALA-----KDFIRRLLVKDPKKRM 264
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL NI
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSY 235
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S + E +D I KLLVK +KR+
Sbjct: 236 DFDEEFFSHTSELA-----KDFIRKLLVKETRKRL 265
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 77/196 (39%), Gaps = 46/196 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D + + LGSG V C R GL YA K + R++ A R+ + R ++E+
Sbjct: 12 DFYDIGEELGSGQFAIVKKC--REKSTGLE---YAAKFIKKRQSRASRRGVSREEIEREV 66
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL--YAARQRQPGKRFGISSAKXXXX 198
IL + H + TL+ +E L++E GG+L + A++ + S K
Sbjct: 67 SILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD 126
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG-- 256
NY H I + DLKPEN+++ +
Sbjct: 127 GV-------------------NY-------------LHTKKIAHFDLKPENIMLLDKNIP 154
Query: 257 --HIMLSDFDLSFKCD 270
HI L DF L+ + +
Sbjct: 155 IPHIKLIDFGLAHEIE 170
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSAL-----AKDFIRRLLVKDPKKRM 264
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSALA-----KDFIRRLLVKDPKKRM 264
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSALA-----KDFIRRLLVKDPKKRM 264
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSALA-----KDFIRRLLVKDPKKRM 264
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSAL-----AKDFIRRLLVKDPKKRM 264
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGVFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSAL-----AKDFIRRLLVKDPKKRM 264
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 234 EFEDEYFSNTSAL-----AKDFIRRLLVKDPKKRM 263
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 10 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 64
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 65 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 101
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 174 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 233
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 234 EFEDEYFSNTSAL-----AKDFIRRLLVKDPKKRM 263
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 10 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 64
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 65 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 101
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSALA-----KDFIRRLLVKDPKKRM 264
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSAL-----AKDFIRRLLVKDPKKRM 264
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L+ E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILIGELVAGGELF 102
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSAL-----AKDFIRRLLVKDPKKRM 264
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGKFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 54/95 (56%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT E++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSAL-----AKDFIRRLLVKDPKKRM 264
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
F GT YL+PEV+ +G VD W GV LY +L G PF E+ + I
Sbjct: 165 GFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 224
Query: 416 FPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRI 449
FP S E++ V + +DLI+K+L NP KRI
Sbjct: 225 FP------SPEWDTVTPEAKDLINKMLTINPAKRI 253
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 236 HMMGIVYRDLKPENVLV---REDGHIMLSDFDLSFK 268
H+ GIV+RDLKPEN+L+ + + L+DF L+ +
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE 155
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCF-YAMKVVDREALAIR--KKLHRADMEK 140
D ++L LG G V C + +P YA K+++ + L+ R +KL R E
Sbjct: 4 DEYQLFEELGKGAFSVVRRC------MKIPTGQEYAAKIINTKKLSARDHQKLER---EA 54
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
I +L HP + L+ + LV + GG+L+
Sbjct: 55 RICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF 91
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
F GT YL+PEV+ +G VD W GV LY +L G PF E+ + I F
Sbjct: 166 FAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDF 225
Query: 417 PRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRI 449
P S E++ V + +DLI+K+L NP KRI
Sbjct: 226 P------SPEWDTVTPEAKDLINKMLTINPAKRI 253
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 236 HMMGIVYRDLKPENVLV---REDGHIMLSDFDLSFK 268
H+ GIV+RDLKPEN+L+ + + L+DF L+ +
Sbjct: 120 HLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIE 155
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCF-YAMKVVDREALAIR--KKLHRADMEK 140
D ++L LG G V C + +P YA K+++ + L+ R +KL R E
Sbjct: 4 DEYQLFEELGKGAFSVVRRC------MKIPTGQEYAAKIINTKKLSARDHQKLER---EA 54
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
I +L HP + L+ + LV + GG+L+
Sbjct: 55 RICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF 91
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
F GT YL+PEV+ +G VD W GV LY +L G PF E+ + I
Sbjct: 183 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 242
Query: 416 FPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRI 449
FP S E++ V + +DLI+K+L NP KRI
Sbjct: 243 FP------SPEWDTVTPEAKDLINKMLTINPSKRI 271
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Query: 236 HMMGIVYRDLKPENVLVR---EDGHIMLSDFDLSFKCD 270
H MG+V+RDLKPEN+L+ + + L+DF L+ + +
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVE 175
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR--KKLHRADMEKVIL 143
++L LG G V C + L YA K+++ + L+ R +KL R E I
Sbjct: 24 YQLFEELGKGAFSVVRRC-----VKVLAGQEYAAKIINTKKLSARDHQKLER---EARIC 75
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
+L HP + L+ + L+ + GG+L+
Sbjct: 76 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF 109
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 7/95 (7%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
F GT YL+PEV+ +G VD W GV LY +L G PF E+ + I
Sbjct: 172 GFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYD 231
Query: 416 FPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRI 449
FP S E++ V + +DLI+K+L NP KRI
Sbjct: 232 FP------SPEWDTVTPEAKDLINKMLTINPSKRI 260
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Query: 236 HMMGIVYRDLKPENVLVR---EDGHIMLSDFDLSFKCD 270
H MG+V+R+LKPEN+L+ + + L+DF L+ + +
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR--KKLHRADMEKV 141
+ ++L LG G V C + L YA +++ + L+ R +KL R E
Sbjct: 11 EEYQLFEELGKGAFSVVRRC-----VKVLAGQEYAAMIINTKKLSARDHQKLER---EAR 62
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
I +L HP + L+ + L+ + GG+L+
Sbjct: 63 ICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELF 98
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 7/95 (7%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
F GT YL+PEV+ + +G VD W GV LY +L G PF E+ K I
Sbjct: 165 GFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 224
Query: 416 FPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRI 449
FP S E++ V + ++LI+++L NP KRI
Sbjct: 225 FP------SPEWDTVTPEAKNLINQMLTINPAKRI 253
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 3/36 (8%)
Query: 236 HMMGIVYRDLKPENVLVR---EDGHIMLSDFDLSFK 268
H MG+V+RDLKPEN+L+ + + L+DF L+ +
Sbjct: 120 HQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIE 155
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K+ GT ++APE+++ + G D W++GV Y +L G +PF G+ ++TL N+
Sbjct: 175 KNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNY 234
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
F S++ +D I +LLVK+PKKR+
Sbjct: 235 EFEDEYFSNTSALA-----KDFIRRLLVKDPKKRM 264
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEK-- 140
D++ LGSG V C R GL YA K + R + R+ + R D+E+
Sbjct: 11 DYYDTGEELGSGQFAVVKKC--REKSTGLQ---YAAKFIKKRRTKSSRRGVSREDIEREV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
IL + HP + TL+ +E L++E GG+L+
Sbjct: 66 SILKEIQHPNVITLHEVYENKTDVILILELVAGGELF 102
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K+ GT Y+APEV+ +GH VD W+LG LY +L G PF+ ++T I I K
Sbjct: 198 RKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 413 PLTFPR 418
+ PR
Sbjct: 258 EYSVPR 263
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 41/183 (22%)
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
+A KVV + L + + E I LD+P + + FE + +V+E C L
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL 129
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXH 236
+R R ++ + R+ H
Sbjct: 130 LELHKR----RKAVTEPEA--------------------------RYFMRQTIQGVQYLH 159
Query: 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSC 296
+++RDLK N+ + +D + + DF L+ K+ F+ K C P+
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-----------TKIEFDGERKKTLCGTPNY 208
Query: 297 ATP 299
P
Sbjct: 209 IAP 211
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 16/114 (14%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
++ VGT Y++P+V+ G +G D W+ GV +Y +L G PF + + ++ I +
Sbjct: 166 RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTF 224
Query: 415 TFPR---IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
TFP + VS E LI +LL K+PK+RI SL+ HE+F+
Sbjct: 225 TFPEKDWLNVSPQAE--------SLIRRLLTKSPKQRITSLQAL----EHEWFE 266
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 71/191 (37%), Gaps = 53/191 (27%)
Query: 85 HFRLLRRLGSGDIGNVYLC-----QIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
++ L +G G G V + +IR +P+ F + + R E
Sbjct: 10 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-------------EDVDRFKQE 56
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKR-FGISSAKXXXX 198
I+ LDHP + LY FE + LVME C GG+L+ +R KR F S A
Sbjct: 57 IEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDAARIMK 113
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---RED 255
DV Y H + + +RDLKPEN L D
Sbjct: 114 ---------------DVLSAVAY-------------CHKLNVAHRDLKPENFLFLTDSPD 145
Query: 256 GHIMLSDFDLS 266
+ L DF L+
Sbjct: 146 SPLKLIDFGLA 156
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K T E+ APE++ + G D W +GV Y +L G +PF GE++ +TL N+ +
Sbjct: 208 KVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW 267
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALIRS 474
F SS + +D I LL K P+KR+ ++ ++E H + KG + L
Sbjct: 268 EFDEDAFSSVSP-----EAKDFIKNLLQKEPRKRL-TVHDALE---HPWLKGDHSNLTSR 318
Query: 475 IKPPEVPNNDLYCKIKKK 492
I P N + KIK+K
Sbjct: 319 I--PSSRYNKIRQKIKEK 334
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 82/213 (38%), Gaps = 42/213 (19%)
Query: 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRAD 137
QG V D++ +L LGSG G V+ C + + F A + L +
Sbjct: 46 QGSV-YDYYDILEELGSGAFGVVHRCVEK----ATGRVFVAKFINTPYPL----DKYTVK 96
Query: 138 MEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXX 197
E I+ L HP L L+ FE + L++E+ GG+L+ R + + +S A+
Sbjct: 97 NEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELF---DRIAAEDYKMSEAE--- 150
Query: 198 XXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL--VRED 255
NY H IV+ D+KPEN++ ++
Sbjct: 151 --------------------VINY---MRQACEGLKHMHEHSIVHLDIKPENIMCETKKA 187
Query: 256 GHIMLSDFDLSFKC--DVVPKLLRPKLSFEAIE 286
+ + DF L+ K D + K+ F A E
Sbjct: 188 SSVKIIDFGLATKLNPDEIVKVTTATAEFAAPE 220
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 16/114 (14%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
++ VGT Y++P+V+ G +G D W+ GV +Y +L G PF + + ++ I +
Sbjct: 183 RTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIREGTF 241
Query: 415 TFPR---IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
TFP + VS E LI +LL K+PK+RI SL+ HE+F+
Sbjct: 242 TFPEKDWLNVSPQAE--------SLIRRLLTKSPKQRITSLQAL----EHEWFE 283
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 76/191 (39%), Gaps = 53/191 (27%)
Query: 85 HFRLLRRLGSGDIGNVYLC-----QIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADME 139
++ L +G G G V + +IR +P+ Y ++ VDR + ++E
Sbjct: 27 YYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPK--YFVEDVDR---------FKQEIE 75
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKR-FGISSAKXXXX 198
I+ LDHP + LY FE + LVME C GG+L+ +R KR F S A
Sbjct: 76 --IMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF---ERVVHKRVFRESDAARIMK 130
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---RED 255
DV Y H + + +RDLKPEN L D
Sbjct: 131 ---------------DVLSAVAY-------------CHKLNVAHRDLKPENFLFLTDSPD 162
Query: 256 GHIMLSDFDLS 266
+ L DF L+
Sbjct: 163 SPLKLIDFGLA 173
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K GT Y+APEV+ +GH VD W+LG LY +L G PF+ ++T I I K
Sbjct: 198 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 413 PLTFPR 418
+ PR
Sbjct: 258 EYSVPR 263
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 63/183 (34%), Gaps = 41/183 (22%)
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
+A KVV + L + + E I LD+P + + FE + +V+E C L
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL 129
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXH 236
+R R ++ + R+ H
Sbjct: 130 LELHKR----RKAVTEPEA--------------------------RYFMRQTIQGVQYLH 159
Query: 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSC 296
+++RDLK N+ + +D + + DF L+ K+ F+ K + C P+
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-----------TKIEFDGERKKDLCGTPNY 208
Query: 297 ATP 299
P
Sbjct: 209 IAP 211
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
F GT YL+PEV+ +G VD W GV LY +L G PF E+ K I
Sbjct: 192 GFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYD 251
Query: 416 FPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGS 451
FP S E++ V + ++LI+++L NP KRI +
Sbjct: 252 FP------SPEWDTVTPEAKNLINQMLTINPAKRITA 282
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 43/96 (44%), Gaps = 10/96 (10%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR--KKLHRADMEKV 141
D ++L LG G V C + P YA K+++ + L+ R +KL R E
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQE-----YAAKIINTKKLSARDHQKLER---EAR 82
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
I +L HP + L+ + LV + GG+L+
Sbjct: 83 ICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELF 118
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K GT Y+APEV+ +GH VD W+LG LY +L G PF+ ++T I I K
Sbjct: 198 RKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 257
Query: 413 PLTFPR 418
+ PR
Sbjct: 258 EYSVPR 263
Score = 29.3 bits (64), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 62/183 (33%), Gaps = 41/183 (22%)
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
+A KVV + L + + E I LD+P + + FE + +V+E C L
Sbjct: 70 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL 129
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXH 236
+R R ++ + R+ H
Sbjct: 130 LELHKR----RKAVTEPEA--------------------------RYFMRQTIQGVQYLH 159
Query: 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSC 296
+++RDLK N+ + +D + + DF L+ K+ F+ K C P+
Sbjct: 160 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-----------TKIEFDGERKKXLCGTPNY 208
Query: 297 ATP 299
P
Sbjct: 209 IAP 211
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K GT Y+APEV+ +GH VD W+LG LY +L G PF+ ++T I I K
Sbjct: 182 RKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKN 241
Query: 413 PLTFPR 418
+ PR
Sbjct: 242 EYSVPR 247
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 35/183 (19%), Positives = 63/183 (34%), Gaps = 41/183 (22%)
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
+A KVV + L + + E I LD+P + + FE + +V+E C L
Sbjct: 54 FAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSL 113
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXH 236
+R R ++ + R+ H
Sbjct: 114 LELHKR----RKAVTEPEA--------------------------RYFMRQTIQGVQYLH 143
Query: 237 MMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSC 296
+++RDLK N+ + +D + + DF L+ K+ F+ K + C P+
Sbjct: 144 NNRVIHRDLKLGNLFLNDDMDVKIGDFGLA-----------TKIEFDGERKKDLCGTPNY 192
Query: 297 ATP 299
P
Sbjct: 193 IAP 195
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K GT E+ APEV G+ G D W++GV Y +L G +PF GEN+++TL N+
Sbjct: 314 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 373
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
S E +D I KLL+ +P R+
Sbjct: 374 NMDDSAFSGISE-----DGKDFIRKLLLADPNTRM 403
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
LDH+ + LG+G G V+ R F M + + +RK++
Sbjct: 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF-VMTPHESDKETVRKEIQ-------T 207
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
+++L HP L L+ FE + ++ E+ GG+L+
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF 242
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
K GT E+ APEV G+ G D W++GV Y +L G +PF GEN+++TL N+
Sbjct: 208 KVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDW 267
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
S E +D I KLL+ +P R+
Sbjct: 268 NMDDSAFSGISE-----DGKDFIRKLLLADPNTRM 297
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 8/95 (8%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
LDH+ + LG+G G V+ R F M + + +RK++
Sbjct: 50 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKF-VMTPHESDKETVRKEIQ-------T 101
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
+++L HP L L+ FE + ++ E+ GG+L+
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELF 136
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGV 421
EY APEV +A D W+LG +Y +L G PF E N++ + NI+ TF
Sbjct: 168 EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF----- 222
Query: 422 SSSKEFEEV-VKLQDLISKLLVKNPKKRIGS 451
+ F+E+ ++ D + +LLVK K R+ +
Sbjct: 223 -DEEAFKEISIEAMDFVDRLLVKERKSRMTA 252
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K+ GT Y+APEV+S +GH VD W++G +Y +L G PF+ ++T + I K
Sbjct: 177 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 236
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ P K V LI K+L +P R
Sbjct: 237 EYSIP-------KHINPVA--ASLIQKMLQTDPTAR 263
Score = 28.9 bits (63), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLK N+ + ED + + DF L+ K +
Sbjct: 138 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 172
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K+ GT Y+APEV+S +GH VD W++G +Y +L G PF+ ++T + I K
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ P K V LI K+L +P R
Sbjct: 233 EYSIP-------KHINPVA--ASLIQKMLQTDPTAR 259
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLK N+ + ED + + DF L+ K +
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 168
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 100/261 (38%), Gaps = 70/261 (26%)
Query: 74 LRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRK-- 131
+R+ +G++G +F++ R+LGSG G V LC+ +N A+KV+ + +
Sbjct: 27 VRKKEGKIGESYFKV-RKLGSGAYGEVLLCKEKNG-----HSEKAIKVIKKSQFDKGRYS 80
Query: 132 -------KLHRADMEKV-ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQ 183
K H ++ +L LDHP + L+ FE Y LV E+ GG+L+ Q
Sbjct: 81 DDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELF----EQ 136
Query: 184 PGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYR 243
R H IV+R
Sbjct: 137 IINRHKFDECDAANIMKQILSGICYLHKHN--------------------------IVHR 170
Query: 244 DLKPENVLVREDG---HIMLSDFDLS--FKCD------------VVPKLLRPKLSFEAIE 286
D+KPEN+L+ +I + DF LS F D + P++L+ K +
Sbjct: 171 DIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYN----- 225
Query: 287 KYEKCSIPSCATPMQPVLSCF 307
EKC + SC M +L +
Sbjct: 226 --EKCDVWSCGVIMYILLCGY 244
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP 417
+GT Y+APEV+ + + D W+ GV +Y +L G PF G+N++ + + K F
Sbjct: 209 LGTAYYIAPEVLKKK-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFD 267
Query: 418 RIGVSS-SKEFEEVVKL 433
+ S E +E++KL
Sbjct: 268 FNDWKNISDEAKELIKL 284
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K+ GT Y+APEV+S +GH VD W++G +Y +L G PF+ ++T + I K
Sbjct: 173 RKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 232
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ P K V LI K+L +P R
Sbjct: 233 EYSIP-------KHINPVA--ASLIQKMLQTDPTAR 259
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLK N+ + ED + + DF L+ K +
Sbjct: 134 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 168
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/123 (36%), Positives = 63/123 (51%), Gaps = 16/123 (13%)
Query: 347 AEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKG----EN 401
A ++++ KS VGT Y+APEV+ + + G D W+ GV LY ML G PF+ +N
Sbjct: 166 ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
Query: 402 NEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH 461
KT+ IL P V S E + LIS++ V +P KRI EI+ H
Sbjct: 226 FRKTIHRILNVQYAIPDY-VHISPE------CRHLISRIFVADPAKRI----SIPEIRNH 274
Query: 462 EFF 464
E+F
Sbjct: 275 EWF 277
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 7/94 (7%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
GT E+LAPEV++ D W++GV Y +L G +PF G+N+ +TL NIL
Sbjct: 250 GTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDL-- 307
Query: 419 IGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGS 451
+EF+++ + ++ ISKLL+K RI +
Sbjct: 308 ----EDEEFQDISEEAKEFISKLLIKEKSWRISA 337
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 71/177 (40%), Gaps = 39/177 (22%)
Query: 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL 151
LG G G V+ C+ GL A K++ + ++++ E ++ LDH L
Sbjct: 97 LGGGRFGQVHKCE--ETATGLK---LAAKIIKTRGMKDKEEVKN---EISVMNQLDHANL 148
Query: 152 PTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXX 211
LY FE+ + LVMEY GG+L+ R + + ++
Sbjct: 149 IQLYDAFESKNDIVLVMEYVDGGELF---DRIIDESYNLT-------------------- 185
Query: 212 HTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV--REDGHIMLSDFDLS 266
D LF H M I++ DLKPEN+L R+ I + DF L+
Sbjct: 186 ELDTILFMK------QICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLA 236
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKG----ENNEK 404
++++ KS VGT Y+APEV+ + + G D W+ GV LY ML G PF+ +N K
Sbjct: 169 LHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 228
Query: 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
T+ IL P V S E + LIS++ V +P KRI EI+ HE+F
Sbjct: 229 TIHRILNVQYAIPDY-VHISPE------CRHLISRIFVADPAKRI----SIPEIRNHEWF 277
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKG----ENNEK 404
++++ KS VGT Y+APEV+ + + G D W+ GV LY ML G PF+ +N K
Sbjct: 169 LHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 228
Query: 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
T+ IL P V S E + LIS++ V +P KRI EI+ HE+F
Sbjct: 229 TIHRILNVQYAIPDY-VHISPE------CRHLISRIFVADPAKRI----SIPEIRNHEWF 277
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 62/120 (51%), Gaps = 16/120 (13%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKG----ENNEK 404
++++ KS VGT Y+APEV+ + + G D W+ GV LY ML G PF+ +N K
Sbjct: 168 LHSQPKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 227
Query: 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
T+ IL P V S E + LIS++ V +P KRI EI+ HE+F
Sbjct: 228 TIHRILNVQYAIPDY-VHISPE------CRHLISRIFVADPAKRI----SIPEIRNHEWF 276
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 92/244 (37%), Gaps = 65/244 (26%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D ++ +++LGSG G V LC ++ + G + A+K++ + ++ E +L
Sbjct: 4 DRYQRVKKLGSGAYGEVLLC--KDKLTGAER---AIKIIKKSSVTTTSNSGALLDEVAVL 58
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAA---RQRQPGKRFGISSAKXXXXXX 200
LDHP + LY FE LVME GG+L+ RQ+
Sbjct: 59 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK------------------ 100
Query: 201 XXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRE---DGH 257
D + H IV+RDLKPEN+L+ D
Sbjct: 101 ---------FSEVDAAVIMK------QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL 145
Query: 258 IMLSDFDLSFKCDV--------------VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPV 303
I + DF LS +V P++LR K EKC + SC + +
Sbjct: 146 IKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYD-------EKCDVWSCGVILYIL 198
Query: 304 LSCF 307
L +
Sbjct: 199 LCGY 202
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409
+ + K +GT Y+APEV+ + + D W+ GV LY +L G PF G+ +++ L +
Sbjct: 159 VGGKMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 217
Query: 410 LKKPLTF-PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
K +F P S E +++VKL +L P KRI +
Sbjct: 218 EKGKFSFDPPDWTQVSDEAKQLVKL------MLTYEPSKRISA 254
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K GT Y+APEV+S +GH VD W++G +Y +L G PF+ ++T + I K
Sbjct: 195 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 254
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ P K V LI K+L +P R
Sbjct: 255 EYSIP-------KHINPVA--ASLIQKMLQTDPTAR 281
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLK N+ + ED + + DF L+ K +
Sbjct: 156 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 190
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K GT Y+APEV+S +GH VD W++G +Y +L G PF+ ++T + I K
Sbjct: 171 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 230
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ P K V LI K+L +P R
Sbjct: 231 EYSIP-------KHINPVA--ASLIQKMLQTDPTAR 257
Score = 28.9 bits (63), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLK N+ + ED + + DF L+ K +
Sbjct: 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 166
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K GT Y+APEV+S +GH VD W++G +Y +L G PF+ ++T + I K
Sbjct: 197 RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKN 256
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ P K V LI K+L +P R
Sbjct: 257 EYSIP-------KHINPVA--ASLIQKMLQTDPTAR 283
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLK N+ + ED + + DF L+ K +
Sbjct: 158 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVE 192
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
F GT YL+PEV+ + VD W GV LY +L G PF E+ + I +
Sbjct: 166 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 225
Query: 417 PRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGS 451
P S E++ V + + LI +L NPKKRI +
Sbjct: 226 P------SPEWDTVTPEAKSLIDSMLTVNPKKRITA 255
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D++ + LG G V C + GL +A K+++ + L+ R + + E I
Sbjct: 5 DNYDVKEELGKGAFSVVRRCV--HKTTGLE---FAAKIINTKKLSARD-FQKLEREARIC 58
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
L HP + L+ + + LV + GG+L+ + + F
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF---EDIVAREF--------------- 100
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---REDGHIML 260
H + + + H GIV+R+LKPEN+L+ + + L
Sbjct: 101 -YSEADASHCIQQILESIAY-----------CHSNGIVHRNLKPENLLLASKAKGAAVKL 148
Query: 261 SDFDLSFKCD 270
+DF L+ + +
Sbjct: 149 ADFGLAIEVN 158
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
F GT YL+PEV+ + VD W GV LY +L G PF E+ + I +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 417 PRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGS 451
P S E++ V + + LI +L NPKKRI +
Sbjct: 227 P------SPEWDTVTPEAKSLIDSMLTVNPKKRITA 256
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D++ + LG G V C + GL +A K+++ + L+ R + + E I
Sbjct: 6 DNYDVKEELGKGAFSVVRRCV--HKTTGLE---FAAKIINTKKLSARD-FQKLEREARIC 59
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
L HP + L+ + + LV + GG+L+ + + F
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF---EDIVAREF--------------- 101
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---REDGHIML 260
H + + + H GIV+R+LKPEN+L+ + + L
Sbjct: 102 -YSEADASHCIQQILESIAY-----------CHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 261 SDFDLSFKCD 270
+DF L+ + +
Sbjct: 150 ADFGLAIEVN 159
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 92/244 (37%), Gaps = 65/244 (26%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D ++ +++LGSG G V LC ++ + G + A+K++ + ++ E +L
Sbjct: 21 DRYQRVKKLGSGAYGEVLLC--KDKLTGAER---AIKIIKKSSVTTTSNSGALLDEVAVL 75
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXXXXX 200
LDHP + LY FE LVME GG+L+ RQ+
Sbjct: 76 KQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK------------------ 117
Query: 201 XXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRE---DGH 257
D + H IV+RDLKPEN+L+ D
Sbjct: 118 ---------FSEVDAAVIMK------QVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL 162
Query: 258 IMLSDFDLSFKCDV--------------VPKLLRPKLSFEAIEKYEKCSIPSCATPMQPV 303
I + DF LS +V P++LR K EKC + SC + +
Sbjct: 163 IKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYD-------EKCDVWSCGVILYIL 215
Query: 304 LSCF 307
L +
Sbjct: 216 LCGY 219
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409
+ + K +GT Y+APEV+ + + D W+ GV LY +L G PF G+ +++ L +
Sbjct: 176 VGGKMKERLGTAYYIAPEVLRKK-YDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRV 234
Query: 410 LKKPLTF-PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
K +F P S E +++VKL +L P KRI +
Sbjct: 235 EKGKFSFDPPDWTQVSDEAKQLVKL------MLTYEPSKRISA 271
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
F GT YL+PEV+ + VD W GV LY +L G PF E+ + I +
Sbjct: 167 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 226
Query: 417 PRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGS 451
P S E++ V + + LI +L NPKKRI +
Sbjct: 227 P------SPEWDTVTPEAKSLIDSMLTVNPKKRITA 256
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D++ + LG G V C + GL +A K+++ + L+ R + + E I
Sbjct: 6 DNYDVKEELGKGAFSVVRRCV--HKTTGLE---FAAKIINTKKLSARD-FQKLEREARIC 59
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
L HP + L+ + + LV + GG+L+ + + F
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELF---EDIVAREF--------------- 101
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---REDGHIML 260
H + + + H GIV+R+LKPEN+L+ + + L
Sbjct: 102 -YSEADASHCIQQILESIAY-----------CHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Query: 261 SDFDLSFKCD 270
+DF L+ + +
Sbjct: 150 ADFGLAIEVN 159
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 16/120 (13%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKG----ENNEK 404
++++ K VGT Y+APEV+ + + G D W+ GV LY ML G PF+ +N K
Sbjct: 169 LHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRK 228
Query: 405 TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
T+ IL P V S E + LIS++ V +P KRI EI+ HE+F
Sbjct: 229 TIHRILNVQYAIPDY-VHISPE------CRHLISRIFVADPAKRI----SIPEIRNHEWF 277
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
F GT YL+PEV+ + VD W GV LY +L G PF E+ + I +
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 417 PRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRI 449
P S E++ V + + LI +L NPKKRI
Sbjct: 250 P------SPEWDTVTPEAKSLIDSMLTVNPKKRI 277
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 84/218 (38%), Gaps = 44/218 (20%)
Query: 60 PHKANQAAWEAMKR----LRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQC 115
PH A+ + M R + A + D++ + LG G V C + GL
Sbjct: 2 PHMASMTGGQQMGRGSEFMMNASTKFS-DNYDVKEELGKGAFSVVRRCV--HKTTGLE-- 56
Query: 116 FYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGD 175
+A K+++ + L+ R + + E I L HP + L+ + + LV + GG+
Sbjct: 57 -FAAKIINTKKLSARD-FQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 114
Query: 176 LYAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXX 235
L+ + + F H + + +
Sbjct: 115 LF---EDIVAREF----------------YSEADASHCIQQILESIAY-----------C 144
Query: 236 HMMGIVYRDLKPENVLV---REDGHIMLSDFDLSFKCD 270
H GIV+R+LKPEN+L+ + + L+DF L+ + +
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
+F G+ Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++ +L+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P F ++L+ K L+ NP KR G+L+
Sbjct: 231 RIP---------FYMSTDCENLLKKFLILNPSKR-GTLE 259
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 42/187 (22%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++RLL+ +G G+ V L R+ + G A++++D+ L L + E I
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLA--RHILTGKE---VAVRIIDKTQLN-SSSLQKLFREVRI 66
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXXXX 199
+ +L+HP + L+ E LVMEY GG+++ A R K
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE------------ 114
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
R H IV+RDLK EN+L+ D +I
Sbjct: 115 ---------------------ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIK 153
Query: 260 LSDFDLS 266
++DF S
Sbjct: 154 IADFGFS 160
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
+F G+ Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++ +L+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P F ++L+ K L+ NP KR G+L+
Sbjct: 231 RIP---------FYMSTDCENLLKKFLILNPSKR-GTLE 259
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 42/187 (22%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++RLL+ +G G+ V L R+ + G A+K++D+ L L + E I
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLA--RHILTGKE---VAVKIIDKTQLN-SSSLQKLFREVRI 66
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXXXX 199
+ +L+HP + L+ E LVMEY GG+++ A R K
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE------------ 114
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
R H IV+RDLK EN+L+ D +I
Sbjct: 115 ---------------------ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIK 153
Query: 260 LSDFDLS 266
++DF S
Sbjct: 154 IADFGFS 160
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
GT Y+APEV++ + + AVD W++GV Y +L G PF EN+ K ILK F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF-- 237
Query: 419 IGVSSSKEFEEVV-KLQDLISKLLVKNPKKR 448
S ++++ +D I L+ K+P+KR
Sbjct: 238 ----DSPYWDDISDSAKDFIRHLMEKDPEKR 264
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 73 RLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKK 132
R ++A+ + FR + LG+G V L + + Q A+K + +EAL K
Sbjct: 9 RWKQAEDIRDIYDFRDV--LGTGAFSEVILAEDKRT-----QKLVAIKCIAKEAL--EGK 59
Query: 133 LHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISS 192
+ E +L + HP + L +E+ + L+M+ GG+L+ R K F
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGF---- 112
Query: 193 AKXXXXXXXXXXXXXXXXXHTDVT-LFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
D + L F H +GIV+RDLKPEN+L
Sbjct: 113 -----------------YTERDASRLIFQ-------VLDAVKYLHDLGIVHRDLKPENLL 148
Query: 252 ---VREDGHIMLSDFDLS 266
+ ED IM+SDF LS
Sbjct: 149 YYSLDEDSKIMISDFGLS 166
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
GT Y+APEV++ + + AVD W++GV Y +L G PF EN+ K ILK F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF-- 237
Query: 419 IGVSSSKEFEEVV-KLQDLISKLLVKNPKKR 448
S ++++ +D I L+ K+P+KR
Sbjct: 238 ----DSPYWDDISDSAKDFIRHLMEKDPEKR 264
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 73 RLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKK 132
R ++A+ + FR + LG+G V L + + Q A+K + +EAL K
Sbjct: 9 RWKQAEDIRDIYDFRDV--LGTGAFSEVILAEDKRT-----QKLVAIKCIAKEAL--EGK 59
Query: 133 LHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISS 192
+ E +L + HP + L +E+ + L+M+ GG+L+ R K F
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGF---- 112
Query: 193 AKXXXXXXXXXXXXXXXXXHTDVT-LFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
D + L F H +GIV+RDLKPEN+L
Sbjct: 113 -----------------YTERDASRLIFQ-------VLDAVKYLHDLGIVHRDLKPENLL 148
Query: 252 ---VREDGHIMLSDFDLS 266
+ ED IM+SDF LS
Sbjct: 149 YYSLDEDSKIMISDFGLS 166
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
GT Y+APEV++ + + AVD W++GV Y +L G PF EN+ K ILK F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF-- 237
Query: 419 IGVSSSKEFEEVV-KLQDLISKLLVKNPKKR 448
S ++++ +D I L+ K+P+KR
Sbjct: 238 ----DSPYWDDISDSAKDFIRHLMEKDPEKR 264
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 73 RLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKK 132
R ++A+ + FR + LG+G V L + + Q A+K + +EAL K
Sbjct: 9 RWKQAEDIRDIYDFRDV--LGTGAFSEVILAEDKRT-----QKLVAIKCIAKEAL--EGK 59
Query: 133 LHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISS 192
+ E +L + HP + L +E+ + L+M+ GG+L+ R K F
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGF---- 112
Query: 193 AKXXXXXXXXXXXXXXXXXHTDVT-LFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
D + L F H +GIV+RDLKPEN+L
Sbjct: 113 -----------------YTERDASRLIFQ-------VLDAVKYLHDLGIVHRDLKPENLL 148
Query: 252 ---VREDGHIMLSDFDLS 266
+ ED IM+SDF LS
Sbjct: 149 YYSLDEDSKIMISDFGLS 166
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
+F G+ Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++ +L+
Sbjct: 171 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P F ++L+ K L+ NP KR G+L+
Sbjct: 231 RIP---------FYMSTDCENLLKKFLILNPSKR-GTLE 259
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 42/187 (22%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++RLL+ +G G+ V L R+ + G A+K++D+ L L + E I
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLA--RHILTGKE---VAVKIIDKTQLN-SSSLQKLFREVRI 66
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXXXX 199
+ +L+HP + L+ E LVMEY GG+++ A R K
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE------------ 114
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
R H IV+RDLK EN+L+ D +I
Sbjct: 115 ---------------------ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIK 153
Query: 260 LSDFDLS 266
++DF S
Sbjct: 154 IADFGFS 160
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 355 KSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI-NILKKP 413
K+ GT Y APE++ G +G VD W++G+ Y +L G PF E ++ + IL
Sbjct: 208 KTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE 267
Query: 414 LTFPRIGVSSSKEFEEV-VKLQDLISKLLVKNPKKRIGSLKG 454
F S ++EV + +DL+ KL+V +PKKR+ + +
Sbjct: 268 YYF------ISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQA 303
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 71/186 (38%), Gaps = 43/186 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D F + LG G VY C+ + Q YA+KV+ + + KK+ R ++ +L
Sbjct: 53 DFFEVESELGRGATSIVYRCKQKGT-----QKPYALKVLKK---TVDKKIVRTEIG--VL 102
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
L HP + L FE LV+E GG+L+ R + G +A
Sbjct: 103 LRLSHPNIIKLKEIFETPTEISLVLELVTGGELF-DRIVEKGYYSERDAAD--------- 152
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRE---DGHIML 260
H GIV+RDLKPEN+L D + +
Sbjct: 153 --------------------AVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKI 192
Query: 261 SDFDLS 266
+DF LS
Sbjct: 193 ADFGLS 198
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
GT Y+APEV++ + + AVD W++GV Y +L G PF EN+ K ILK F
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEF-- 237
Query: 419 IGVSSSKEFEEVV-KLQDLISKLLVKNPKKR 448
S ++++ +D I L+ K+P+KR
Sbjct: 238 ----DSPYWDDISDSAKDFIRHLMEKDPEKR 264
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 82/198 (41%), Gaps = 44/198 (22%)
Query: 73 RLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKK 132
R ++A+ + FR + LG+G V L + + Q A+K + ++AL K
Sbjct: 9 RWKQAEDIRDIYDFRDV--LGTGAFSEVILAEDKRT-----QKLVAIKCIAKKAL--EGK 59
Query: 133 LHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISS 192
+ E +L + HP + L +E+ + L+M+ GG+L+ R K F
Sbjct: 60 EGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF---DRIVEKGF---- 112
Query: 193 AKXXXXXXXXXXXXXXXXXHTDVT-LFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL 251
D + L F H +GIV+RDLKPEN+L
Sbjct: 113 -----------------YTERDASRLIFQ-------VLDAVKYLHDLGIVHRDLKPENLL 148
Query: 252 ---VREDGHIMLSDFDLS 266
+ ED IM+SDF LS
Sbjct: 149 YYSLDEDSKIMISDFGLS 166
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
GT Y+APEV++ + + AVD W++GV Y +L G PF EN+ K ILK F
Sbjct: 184 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEF-- 241
Query: 419 IGVSSSKEFEEVV-KLQDLISKLLVKNPKKR 448
S ++++ +D I L+ K+P KR
Sbjct: 242 ----DSPYWDDISDSAKDFIRNLMEKDPNKR 268
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 72/184 (39%), Gaps = 40/184 (21%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F LG+G V L + + +A+K + ++AL + K + E +L
Sbjct: 24 FEFKETLGTGAFSEVVLAEEK-----ATGKLFAVKCIPKKAL--KGKESSIENEIAVLRK 76
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
+ H + L +E+ ++ LVM+ GG+L+ R K F
Sbjct: 77 IKHENIVALEDIYESPNHLYLVMQLVSGGELF---DRIVEKGF----------------- 116
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---REDGHIMLSD 262
D + H MGIV+RDLKPEN+L E+ IM+SD
Sbjct: 117 ----YTEKDASTLIR------QVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISD 166
Query: 263 FDLS 266
F LS
Sbjct: 167 FGLS 170
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
+F G Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++ +L+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P F ++L+ K L+ NP KR G+L+
Sbjct: 231 RIP---------FYXSTDCENLLKKFLILNPSKR-GTLE 259
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 72/187 (38%), Gaps = 42/187 (22%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++RLL+ +G G+ V L R+ + G A+K++D+ L L + E I
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLA--RHILTGKE---VAVKIIDKTQLN-SSSLQKLFREVRI 66
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXXXX 199
+L+HP + L+ E LV EY GG+++ A R K
Sbjct: 67 XKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKE------------ 114
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
R H IV+RDLK EN+L+ D +I
Sbjct: 115 ---------------------ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIK 153
Query: 260 LSDFDLS 266
++DF S
Sbjct: 154 IADFGFS 160
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
+F G+ Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++ +L+
Sbjct: 164 TFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 223
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P F ++L+ K L+ NP KR G+L+
Sbjct: 224 RIP---------FYMSTDCENLLKKFLILNPSKR-GTLE 252
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 36/184 (19%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++RLL+ +G G+ V L R+ + G A+K++D+ L L + E I
Sbjct: 6 IGNYRLLKTIGKGNFAKVKLA--RHILTGKE---VAVKIIDKTQLN-SSSLQKLFREVRI 59
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXX 202
+ +L+HP + L+ E LVMEY GG+++ + + AK
Sbjct: 60 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAK-------- 111
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSD 262
H IV+RDLK EN+L+ D +I ++D
Sbjct: 112 ----------------------FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIAD 149
Query: 263 FDLS 266
F S
Sbjct: 150 FGFS 153
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 56/114 (49%), Gaps = 13/114 (11%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399
L D V + I++ + SFVGT Y++PE + G + D W++G+ L EM G P
Sbjct: 165 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
Query: 400 ENNEKTLINIL-----KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ + +L + P P GV S ++ QD ++K L+KNP +R
Sbjct: 225 GSGSMAIFELLDYIVNEPPPKLPS-GVFS-------LEFQDFVNKCLIKNPAER 270
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
I++RD+KP N+LV G I L DF +S
Sbjct: 145 IMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 11/98 (11%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
F G+ Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++ +L+
Sbjct: 172 FCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYR 231
Query: 416 FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P F ++L+ K L+ NP KR G+L+
Sbjct: 232 IP---------FYMSTDCENLLKKFLILNPSKR-GTLE 259
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 74/187 (39%), Gaps = 42/187 (22%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++RLL+ +G G+ V L R+ + G A++++D+ L L + E I
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLA--RHILTGKE---VAVRIIDKTQLN-SSSLQKLFREVRI 66
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXXXX 199
+ +L+HP + L+ E LVMEY GG+++ A R K
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE------------ 114
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
R H IV+RDLK EN+L+ D +I
Sbjct: 115 ---------------------ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIK 153
Query: 260 LSDFDLS 266
++DF S
Sbjct: 154 IADFGFS 160
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 11/99 (11%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
+F G Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++ +L+
Sbjct: 171 AFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKY 230
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P F ++L+ K L+ NP KR G+L+
Sbjct: 231 RIP---------FYMSTDCENLLKKFLILNPSKR-GTLE 259
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 42/187 (22%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++RLL+ +G G+ V L R+ + G A+K++D+ L L + E I
Sbjct: 13 IGNYRLLKTIGKGNFAKVKLA--RHILTGKE---VAVKIIDKTQLN-SSSLQKLFREVRI 66
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXXXX 199
+ +L+HP + L+ E LVMEY GG+++ A R K
Sbjct: 67 MKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE------------ 114
Query: 200 XXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIM 259
R H IV+RDLK EN+L+ D +I
Sbjct: 115 ---------------------ARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIK 153
Query: 260 LSDFDLS 266
++DF S
Sbjct: 154 IADFGFS 160
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 11/105 (10%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
+ + +F G+ Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++
Sbjct: 163 VGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 222
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
+L+ P F ++L+ + LV NP KR G+L+
Sbjct: 223 VLRGKYRIP---------FYMSTDCENLLKRFLVLNPIKR-GTLE 257
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 46/198 (23%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEK 140
+ ++RLL+ +G G+ V L R+ + G A+K++D+ L +KL R E
Sbjct: 11 IGNYRLLKTIGKGNFAKVKLA--RHILTGRE---VAIKIIDKTQLNPTSLQKLFR---EV 62
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXX 197
I+ +L+HP + L+ E L+MEY GG+++ A R K
Sbjct: 63 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK----------- 111
Query: 198 XXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGH 257
R H IV+RDLK EN+L+ D +
Sbjct: 112 ----------------------EARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN 149
Query: 258 IMLSDFDLSFKCDVVPKL 275
I ++DF S + V KL
Sbjct: 150 IKIADFGFSNEFTVGGKL 167
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 355 KSFVGTHEYLAPEVISGQ------GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
+S GT YLAPE+I G+G VD W+ GV +Y +L G+ PF L
Sbjct: 181 RSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 240
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
I+ F G ++ + VK DL+S+ LV P+KR + E H FF+
Sbjct: 241 IMSGNYQF---GSPEWDDYSDTVK--DLVSRFLVVQPQKRY----TAEEALAHPFFQ 288
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKL 275
H + IV+RDLKPEN+L+ +D +I L+DF S + D KL
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL 180
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 102/245 (41%), Gaps = 58/245 (23%)
Query: 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRAD 137
QG + D F R+LGSG G+V+L + R+ GL + +K ++++ + + A+
Sbjct: 17 QGTID-DLFIFKRKLGSGAFGDVHLVEERSS--GLERV---IKTINKDRSQVPMEQIEAE 70
Query: 138 MEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXX 197
+E +L LDHP + ++ FE H +VME C GG+L I SA+
Sbjct: 71 IE--VLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLER----------IVSAQARG 118
Query: 198 XXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRED-- 255
+ +F H +V++DLKPEN+L ++
Sbjct: 119 KALSEGYVAELMKQMMNALAYF----------------HSQHVVHKDLKPENILFQDTSP 162
Query: 256 -GHIMLSDFDLS--FKCD------------VVPKLLRPKLSFEAIEKYEKCSIPSCATPM 300
I + DF L+ FK D + P++ + ++F KC I S M
Sbjct: 163 HSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTF-------KCDIWSAGVVM 215
Query: 301 QPVLS 305
+L+
Sbjct: 216 YFLLT 220
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 57/117 (48%), Gaps = 15/117 (12%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
+ S + GT Y+APEV + D W+ GV +Y +L G PF G + E+ +
Sbjct: 180 DEHSTNAAGTALYMAPEVFK-RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEE-----V 233
Query: 411 KKPLTF--PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
++ T+ P V + V DL+ ++L K+P++R + ++ HE+FK
Sbjct: 234 QQKATYKEPNYAVECRPLTPQAV---DLLKQMLTKDPERR----PSAAQVLHHEWFK 283
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 54/105 (51%), Gaps = 11/105 (10%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
+ + +F G Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++
Sbjct: 166 VGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 225
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
+L+ P F ++L+ + LV NP KR G+L+
Sbjct: 226 VLRGKYRIP---------FYMSTDCENLLKRFLVLNPIKR-GTLE 260
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 80/198 (40%), Gaps = 46/198 (23%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEK 140
+ ++RLL+ +G G+ V L R+ + G A+K++D+ L +KL R E
Sbjct: 14 IGNYRLLKTIGKGNFAKVKLA--RHILTGRE---VAIKIIDKTQLNPTSLQKLFR---EV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXX 197
I+ +L+HP + L+ E L+MEY GG+++ A R K
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEK----------- 114
Query: 198 XXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGH 257
R H IV+RDLK EN+L+ D +
Sbjct: 115 ----------------------EARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMN 152
Query: 258 IMLSDFDLSFKCDVVPKL 275
I ++DF S + V KL
Sbjct: 153 IKIADFGFSNEFTVGGKL 170
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 11/100 (11%)
Query: 359 GTHEYLAPEVI--SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
GT ++APEV+ + + +G D W+ GV L+ +L G PF G N+ T+ +L K L F
Sbjct: 236 GTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF 295
Query: 417 --PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKG 454
P V S +DL+S LL +N +R +++
Sbjct: 296 ENPNYNVLSPLA-------RDLLSNLLNRNVDERFDAMRA 328
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 95 GDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV-----ILTMLDHP 149
G IG +R + + A+K++++ + ++++ D+E++ ++ L HP
Sbjct: 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKI---RQINPKDVERIKTEVRLMKKLHHP 88
Query: 150 FLPTLYAEFEASHYSCLVMEYCPGGDL 176
+ LY +E Y CLVME C GG L
Sbjct: 89 NIARLYEVYEDEQYICLVMELCHGGHL 115
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Query: 236 HMMGIVYRDLKPENVLVREDG--HIMLSDFDLS 266
H GI +RD+KPEN L + I L DF LS
Sbjct: 185 HNQGICHRDIKPENFLFSTNKSFEIKLVDFGLS 217
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 349 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
P ++ + VGT ++APEV++ + +G VD W+LG+ EM+ G P+ EN + L
Sbjct: 169 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY- 227
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKL----QDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
I + + E + KL +D +++ L + +KR GS K E+ +H+F
Sbjct: 228 ---------LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GSAK---ELIQHQFL 274
Query: 465 K 465
K
Sbjct: 275 K 275
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/39 (30%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPK 274
H +++R++K +N+L+ DG + L+DF F + P+
Sbjct: 134 HSNQVIHRNIKSDNILLGMDGSVKLTDF--GFCAQITPE 170
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 62/121 (51%), Gaps = 18/121 (14%)
Query: 349 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
P ++ + VGT ++APEV++ + +G VD W+LG+ EM+ G P+ EN + L
Sbjct: 168 PEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY- 226
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKL----QDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
I + + E + KL +D +++ L + +KR GS K E+ +H+F
Sbjct: 227 ---------LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-GSAK---ELLQHQFL 273
Query: 465 K 465
K
Sbjct: 274 K 274
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPK 274
H +++RD+K +N+L+ DG + L+DF F + P+
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDF--GFCAQITPE 169
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 8/116 (6%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
++++ KS VGT Y+APEV+ Q + G D W+ GV LY ML G PF+ +
Sbjct: 170 LHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRK 229
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
+++ L+ + S + + LIS++ V +P RI EIK H +F
Sbjct: 230 TIQRILS---VKYSIPDDIRISPECCHLISRIFVADPATRI----SIPEIKTHSWF 278
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 63/169 (37%), Gaps = 39/169 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D + ++ +GSG+ G L + + L + A+K ++R A AI + + R E +
Sbjct: 20 DRYDFVKDIGSGNFGVARLMRDK-----LTKELVAVKYIERGA-AIDENVQR---EIINH 70
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
L HP + + ++MEY GG+LY R G RF A
Sbjct: 71 RSLRHPNIVRFKEVILTPTHLAIIMEYASGGELY-ERICNAG-RFSEDEA---------- 118
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV 252
RF H M I +RDLK EN L+
Sbjct: 119 ------------------RFFFQQLLSGVSYCHSMQICHRDLKLENTLL 149
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 15/117 (12%)
Query: 355 KSFVGTHEYLAPEVISGQ------GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
+ GT YLAPE+I G+G VD W+ GV +Y +L G+ PF L
Sbjct: 181 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 240
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
I+ F G ++ + VK DL+S+ LV P+KR + E H FF+
Sbjct: 241 IMSGNYQF---GSPEWDDYSDTVK--DLVSRFLVVQPQKRY----TAEEALAHPFFQ 288
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPS 295
H + IV+RDLKPEN+L+ +D +I L+DF S + D KL E C PS
Sbjct: 141 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL------------REVCGTPS 188
Query: 296 CATPMQPVLSCFSSVSH 312
P ++ C + +H
Sbjct: 189 YLAP--EIIECSMNDNH 203
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 355 KSFVGTHEYLAPEVISGQ------GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
+ GT YLAPE+I G+G VD W+ GV +Y +L G+ PF L
Sbjct: 168 REVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRM 227
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
I+ F G ++ + VK DL+S+ LV P+KR
Sbjct: 228 IMSGNYQF---GSPEWDDYSDTVK--DLVSRFLVVQPQKR 262
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 14/77 (18%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPS 295
H + IV+RDLKPEN+L+ +D +I L+DF S + D KL E C PS
Sbjct: 128 HKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL------------REVCGTPS 175
Query: 296 CATPMQPVLSCFSSVSH 312
P ++ C + +H
Sbjct: 176 YLAP--EIIECSMNDNH 190
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 349 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
P ++ VGT ++APEV++ + +G VD W+LG+ EM+ G P+ EN + L
Sbjct: 168 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY- 226
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKL----QDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
I + + E + KL +D +++ L + +KR GS K E+ +H+F
Sbjct: 227 ---------LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GSAK---ELLQHQFL 273
Query: 465 K 465
K
Sbjct: 274 K 274
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPK 274
H +++RD+K +N+L+ DG + L+DF F + P+
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDF--GFCAQITPE 169
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 349 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
P ++ VGT ++APEV++ + +G VD W+LG+ EM+ G P+ EN + L
Sbjct: 169 PEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY- 227
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKL----QDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
I + + E + KL +D +++ L + +KR GS K E+ +H+F
Sbjct: 228 ---------LIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKR-GSAK---ELIQHQFL 274
Query: 465 K 465
K
Sbjct: 275 K 275
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPK 274
H +++RD+K +N+L+ DG + L+DF F + P+
Sbjct: 134 HSNQVIHRDIKSDNILLGMDGSVKLTDF--GFCAQITPE 170
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 61/121 (50%), Gaps = 18/121 (14%)
Query: 349 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
P ++ VGT ++APEV++ + +G VD W+LG+ EM+ G P+ EN + L
Sbjct: 168 PEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALY- 226
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKL----QDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
I + + E + KL +D +++ L + +KR GS K E+ +H+F
Sbjct: 227 ---------LIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKR-GSAK---ELLQHQFL 273
Query: 465 K 465
K
Sbjct: 274 K 274
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPK 274
H +++RD+K +N+L+ DG + L+DF F + P+
Sbjct: 133 HSNQVIHRDIKSDNILLGMDGSVKLTDF--GFCAQITPE 169
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K VGT ++APE+IS +G VD W+LG+ + EM+ G P+ E K + +++
Sbjct: 181 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 239
Query: 413 PLTFPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
L PR+ K +V L+ + +LLV++P +R + E+ +H F
Sbjct: 240 NLP-PRL-----KNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 282
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDF 263
H G+++RD+K +++L+ DG + LSDF
Sbjct: 142 HAQGVIHRDIKSDSILLTHDGRVKLSDF 169
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K VGT ++APE+IS +G VD W+LG+ + EM+ G P+ E K + +++
Sbjct: 303 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 361
Query: 413 PLTFPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
L PR+ K +V L+ + +LLV++P +R + E+ +H F
Sbjct: 362 NLP-PRL-----KNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 404
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDF 263
H G+++RD+K +++L+ DG + LSDF
Sbjct: 264 HAQGVIHRDIKSDSILLTHDGRVKLSDF 291
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K VGT ++APE+IS +G VD W+LG+ + EM+ G P+ E K + +++
Sbjct: 183 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 241
Query: 413 PLTFPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
L PR+ K +V L+ + +LLV++P +R + E+ +H F
Sbjct: 242 NLP-PRL-----KNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 284
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDF 263
H G+++RD+K +++L+ DG + LSDF
Sbjct: 144 HAQGVIHRDIKSDSILLTHDGRVKLSDF 171
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K VGT ++APE+IS +G VD W+LG+ + EM+ G P+ E K + +++
Sbjct: 172 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 230
Query: 413 PLTFPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
L PR+ K +V L+ + +LLV++P +R + E+ +H F
Sbjct: 231 NLP-PRL-----KNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 273
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDF 263
H G+++RD+K +++L+ DG + LSDF
Sbjct: 133 HAQGVIHRDIKSDSILLTHDGRVKLSDF 160
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 349 PINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
P N K+ T Y APE+++ G+ + D W+LGV LY ML G PF+ + T +
Sbjct: 161 PDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTS 220
Query: 409 ILKKPLTFPRIGVSSSKEFEEVV--KLQDLISKLLVKNPKKRI 449
++ + S E + V + +DLI LL +P KR+
Sbjct: 221 AVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 57/146 (39%), Gaps = 34/146 (23%)
Query: 126 ALAIRKKLHRADMEKVILTML---DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQR 182
A+ I K A+ +K I + HP + L+ F ++ LVME GG+L+ ++
Sbjct: 40 AVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKK 99
Query: 183 QPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVY 242
+ K F + A + H +G+V+
Sbjct: 100 K--KHFSETEAS----------------------------YIMRKLVSAVSHMHDVGVVH 129
Query: 243 RDLKPENVL-VREDGHIMLSDFDLSF 267
RDLKPEN+L E+ ++ + D F
Sbjct: 130 RDLKPENLLFTDENDNLEIKIIDFGF 155
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K VGT ++APE+IS +G VD W+LG+ + EM+ G P+ E K + +++
Sbjct: 226 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 284
Query: 413 PLTFPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
L PR+ K +V L+ + +LLV++P +R + E+ +H F
Sbjct: 285 NLP-PRL-----KNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 327
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDF 263
H G+++RD+K +++L+ DG + LSDF
Sbjct: 187 HAQGVIHRDIKSDSILLTHDGRVKLSDF 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 2/90 (2%)
Query: 360 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRI 419
T ++APEV+ QG+ +A D W+LGV LY ML G TPF + T IL + + +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDDTPEEILAR-IGSGKF 240
Query: 420 GVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
+S +DL+SK+L +P +R+
Sbjct: 241 SLSGGYWNSVSDTAKDLVSKMLHVDPHQRL 270
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 13/91 (14%)
Query: 236 HMMGIVYRDLKPENVL-VREDGH---IMLSDFDLSFKCDVVPKLLRP---KLSFEAIEKY 288
H G+V+RDLKP N+L V E G+ I + DF + + LL +F A E
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 192
Query: 289 EK------CSIPSCATPMQPVLSCFSSVSHG 313
E+ C I S + +L+ ++ ++G
Sbjct: 193 ERQGYDAACDIWSLGVLLYTMLTGYTPFANG 223
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 79/187 (42%), Gaps = 40/187 (21%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D ++ R LG G G V LC ++ + G +C A+KV+ + + + E +L
Sbjct: 26 DRYKGQRVLGKGSFGEVILC--KDKITG-QEC--AVKVISKRQVKQKTDKESLLREVQLL 80
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFG-ISSAKXXXXXXXX 202
LDHP + LY FE Y LV E GG+L+ + KRF + +A+
Sbjct: 81 KQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQ---- 134
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVR---EDGHIM 259
V Y H IV+RDLKPEN+L+ +D +I
Sbjct: 135 ------------VLSGITYX-------------HKNKIVHRDLKPENLLLESKSKDANIR 169
Query: 260 LSDFDLS 266
+ DF LS
Sbjct: 170 IIDFGLS 176
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
+ K +GT Y+APEV+ G + D W+ GV LY +L G PF G N L + K
Sbjct: 184 KXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
TF + K+ E K DLI K L P RI +
Sbjct: 243 KYTFE---LPQWKKVSESAK--DLIRKXLTYVPSXRISA 276
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 60/113 (53%), Gaps = 12/113 (10%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R K VGT ++APE+IS +G VD W+LG+ + EM+ G P+ E K + +++
Sbjct: 176 RRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAM-KMIRD 234
Query: 413 PLTFPRIGVSSSKEFEEVV-KLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
L PR+ K +V L+ + +LLV++P +R + E+ +H F
Sbjct: 235 NLP-PRL-----KNLHKVSPSLKGFLDRLLVRDPAQR----ATAAELLKHPFL 277
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDF 263
H G+++RD+K +++L+ DG + LSDF
Sbjct: 137 HAQGVIHRDIKSDSILLTHDGRVKLSDF 164
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 49/101 (48%), Gaps = 6/101 (5%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
+ + K +GT Y+APEV+ G + D W+ GV LY +L G PF G N L +
Sbjct: 188 SKKMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVE 246
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
K TF + K+ E K DLI K+L P RI +
Sbjct: 247 KGKYTFE---LPQWKKVSESAK--DLIRKMLTYVPSMRISA 282
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D ++ R LG G G V LC ++ + G +C A+KV+ + + + E +L
Sbjct: 32 DRYKGQRVLGKGSFGEVILC--KDKITG-QEC--AVKVISKRQVKQKTDKESLLREVQLL 86
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFG-ISSAKXXXXXXXX 202
LDHP + LY FE Y LV E GG+L+ + KRF + +A+
Sbjct: 87 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVL-- 142
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVR---EDGHIM 259
+ +T H IV+RDLKPEN+L+ +D +I
Sbjct: 143 ----------SGITYM-----------------HKNKIVHRDLKPENLLLESKSKDANIR 175
Query: 260 LSDFDLSFKCDVVPKL 275
+ DF LS + K+
Sbjct: 176 IIDFGLSTHFEASKKM 191
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
+ K +GT Y+APEV+ G + D W+ GV LY +L G PF G N L + K
Sbjct: 184 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 242
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
TF + K+ E K DLI K+L P RI +
Sbjct: 243 KYTFE---LPQWKKVSESAK--DLIRKMLTYVPSMRISA 276
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D ++ R LG G G V LC ++ + G +C A+KV+ + + + E +L
Sbjct: 26 DRYKGQRVLGKGSFGEVILC--KDKITG-QEC--AVKVISKRQVKQKTDKESLLREVQLL 80
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFG-ISSAKXXXXXXXX 202
LDHP + LY FE Y LV E GG+L+ + KRF + +A+
Sbjct: 81 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFD--EIISRKRFSEVDAARIIRQVL-- 136
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVR---EDGHIM 259
+ +T H IV+RDLKPEN+L+ +D +I
Sbjct: 137 ----------SGITYM-----------------HKNKIVHRDLKPENLLLESKSKDANIR 169
Query: 260 LSDFDLSFKCDVVPKL 275
+ DF LS + K+
Sbjct: 170 IIDFGLSTHFEASKKM 185
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
+ K VGT ++APEVIS + + VD W+LG+ + EM+ G P+ ++ + +K+
Sbjct: 197 KRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP----VQAMKR 252
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
P + +S + V L+D + ++LV++P++R
Sbjct: 253 LRDSPPPKLKNSHKVSPV--LRDFLERMLVRDPQER 286
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 21/28 (75%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDF 263
H G+++RD+K +++L+ DG + LSDF
Sbjct: 158 HAQGVIHRDIKSDSILLTLDGRVKLSDF 185
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 360 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG---ENNEKTLINILKKPLTF 416
T ++APEV+ QG+ D W+LG+ LY ML G TPF + E+ L I T
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
++ E +DL+SK+L +P +R+
Sbjct: 248 SGGNWNTVSE-----TAKDLVSKMLHVDPHQRL 275
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 46/157 (29%)
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
YA+KV+D+ K ++ +++L HP + TL ++ + LV E GG+L
Sbjct: 55 YAVKVIDK------SKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYR---FXXXXXXXXXX 233
RQ FF+ R F
Sbjct: 109 LDKILRQK---------------------------------FFSEREASFVLHTIGKTVE 135
Query: 234 XXHMMGIVYRDLKPENVL-VREDGH---IMLSDFDLS 266
H G+V+RDLKP N+L V E G+ + + DF +
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFA 172
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 8/93 (8%)
Query: 360 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG---ENNEKTLINILKKPLTF 416
T ++APEV+ QG+ D W+LG+ LY ML G TPF + E+ L I T
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTL 247
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
++ E +DL+SK+L +P +R+
Sbjct: 248 SGGNWNTVSE-----TAKDLVSKMLHVDPHQRL 275
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 59/157 (37%), Gaps = 46/157 (29%)
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
YA+KV+D+ K ++ +++L HP + TL ++ + LV E GG+L
Sbjct: 55 YAVKVIDKS------KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMRGGEL 108
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYR---FXXXXXXXXXX 233
RQ FF+ R F
Sbjct: 109 LDKILRQK---------------------------------FFSEREASFVLHTIGKTVE 135
Query: 234 XXHMMGIVYRDLKPENVL-VREDGH---IMLSDFDLS 266
H G+V+RDLKP N+L V E G+ + + DF +
Sbjct: 136 YLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFA 172
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
+ K +GT Y+APEV+ G + D W+ GV LY +L G PF G N L + K
Sbjct: 207 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 265
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
TF + K+ E K DLI K+L P RI +
Sbjct: 266 KYTFE---LPQWKKVSESAK--DLIRKMLTYVPSMRISA 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D ++ R LG G G V LC ++ + G +C A+KV+ + + + E +L
Sbjct: 49 DRYKGQRVLGKGSFGEVILC--KDKITG-QEC--AVKVISKRQVKQKTDKESLLREVQLL 103
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFG-ISSAKXXXXXXXX 202
LDHP + LY FE Y LV E GG+L+ + KRF + +A+
Sbjct: 104 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELF--DEIISRKRFSEVDAARIIRQVL-- 159
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVR---EDGHIM 259
+ +T H IV+RDLKPEN+L+ +D +I
Sbjct: 160 ----------SGITYM-----------------HKNKIVHRDLKPENLLLESKSKDANIR 192
Query: 260 LSDFDLSFKCDVVPKL 275
+ DF LS + K+
Sbjct: 193 IIDFGLSTHFEASKKM 208
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+ GT Y++PE+ + HG D W+LG Y +L G PF + + TL ++
Sbjct: 171 TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE 230
Query: 416 FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P ++ +DLI +LL +NP R+
Sbjct: 231 MPSF---------LSIEAKDLIHQLLRRNPADRL 255
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 88/219 (40%), Gaps = 49/219 (22%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
++ F++ LG G VY + + GL A+K++D++A+ + R E I
Sbjct: 10 IEDFKVGNLLGKGSFAGVY--RAESIHTGLE---VAIKMIDKKAMYKAGMVQRVQNEVKI 64
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL--YAARQRQPGKRFGISSAKXXXXXX 200
L HP + LY FE S+Y LV+E C G++ Y + +P F + A+
Sbjct: 65 HCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKP---FSENEAR------ 115
Query: 201 XXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIML 260
H +T H GI++RDL N+L+ + +I +
Sbjct: 116 --------HFMHQIITGML--------------YLHSHGILHRDLTLSNLLLTRNMNIKI 153
Query: 261 SDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPSCATP 299
+DF L+ +L + Y C P+ +P
Sbjct: 154 ADFGLA-----------TQLKMPHEKHYTLCGTPNYISP 181
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
+ K +GT Y+APEV+ G + D W+ GV LY +L G PF G N L + K
Sbjct: 208 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKG 266
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
TF + K+ E K DLI K+L P RI +
Sbjct: 267 KYTFE---LPQWKKVSESAK--DLIRKMLTYVPSMRISA 300
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D ++ R LG G G V LC ++ + G +C A+KV+ + + + E +L
Sbjct: 50 DRYKGQRVLGKGSFGEVILC--KDKITG-QEC--AVKVISKRQVKQKTDKESLLREVQLL 104
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFG-ISSAKXXXXXXXX 202
LDHP + LY FE Y LV E GG+L+ + KRF + +A+
Sbjct: 105 KQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVL-- 160
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVR---EDGHIM 259
+ +T H IV+RDLKPEN+L+ +D +I
Sbjct: 161 ----------SGITYM-----------------HKNKIVHRDLKPENLLLESKSKDANIR 193
Query: 260 LSDFDLSFKCDVVPKL 275
+ DF LS + K+
Sbjct: 194 IIDFGLSTHFEASKKM 209
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL--IN 408
N + K +GT Y+APEV+ G + D W+ GV LY +L GT PF G+N L +
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
K P+ S +DLI K+L +P RI
Sbjct: 236 TGKYAFDLPQWRTISDDA-------KDLIRKMLTFHPSLRI 269
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 39/186 (20%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ + ++ LG G G V C+ R + Q YA+KV+++ A A K E +L
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDR-----ITQQEYAVKVINK-ASAKNKDTSTILREVELL 75
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
LDHP + L+ E S +V E GG+L+ ++ KRF A
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDA---------- 123
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---REDGHIML 260
+ +T H IV+RDLKPEN+L+ +D I +
Sbjct: 124 -ARIIKQVFSGITYM-----------------HKHNIVHRDLKPENILLESKEKDCDIKI 165
Query: 261 SDFDLS 266
DF LS
Sbjct: 166 IDFGLS 171
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL--IN 408
N + K +GT Y+APEV+ G + D W+ GV LY +L GT PF G+N L +
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
K P+ S +DLI K+L +P RI
Sbjct: 236 TGKYAFDLPQWRTISDDA-------KDLIRKMLTFHPSLRI 269
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 39/186 (20%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ + ++ LG G G V C+ R + Q YA+KV+++ A A K E +L
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDR-----ITQQEYAVKVINK-ASAKNKDTSTILREVELL 75
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
LDHP + L+ E S +V E GG+L+ ++ KRF A
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDA---------- 123
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---REDGHIML 260
+ +T H IV+RDLKPEN+L+ +D I +
Sbjct: 124 -ARIIKQVFSGITYM-----------------HKHNIVHRDLKPENILLESKEKDCDIKI 165
Query: 261 SDFDLS 266
DF LS
Sbjct: 166 IDFGLS 171
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 355 KSFVGTHEYLAPEV---ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
++ GT YLAPEV + G+ AVD W+LGV L+ L G PF + +T ++ LK
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVS-LK 229
Query: 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
+T + E K DL+ KLLV +PK R +
Sbjct: 230 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 44/188 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH-----RADM 138
D + + + LGSG G V L R + A+K++ + AI +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKV-----AIKIISKRKFAIGSAREADPALNVET 64
Query: 139 EKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
E IL L+HP + + F+A Y +V+E GG+L+ + KR ++ K
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF--DKVVGNKRLKEATCK---- 117
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---RED 255
L+F Y+ H GI++RDLKPENVL+ ED
Sbjct: 118 ------------------LYF-YQMLLAVQYL-----HENGIIHRDLKPENVLLSSQEED 153
Query: 256 GHIMLSDF 263
I ++DF
Sbjct: 154 CLIKITDF 161
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 355 KSFVGTHEYLAPEV---ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
++ GT YLAPEV + G+ AVD W+LGV L+ L G PF + + LK
Sbjct: 299 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS----LK 354
Query: 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
+T + E K DL+ KLLV +PK R +
Sbjct: 355 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 394
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 44/188 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH-----RADM 138
D + + + LGSG G V L R + A++++ + AI +
Sbjct: 135 DEYIMSKTLGSGACGEVKLAFERKTCKKV-----AIRIISKRKFAIGSAREADPALNVET 189
Query: 139 EKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
E IL L+HP + + F+A Y +V+E GG+L+ + KR ++ K
Sbjct: 190 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCK---- 242
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---RED 255
L+F H GI++RDLKPENVL+ ED
Sbjct: 243 ------------------LYF------YQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 278
Query: 256 GHIMLSDF 263
I ++DF
Sbjct: 279 CLIKITDF 286
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 355 KSFVGTHEYLAPEV---ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
++ GT YLAPEV + G+ AVD W+LGV L+ L G PF + +T ++ LK
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVS-LK 229
Query: 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
+T + E K DL+ KLLV +PK R +
Sbjct: 230 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 44/188 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH-----RADM 138
D + + + LGSG G V L R + A+K++ + AI +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKV-----AIKIISKRKFAIGSAREADPALNVET 64
Query: 139 EKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
E IL L+HP + + F+A Y +V+E GG+L+ + KR ++ K
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF--DKVVGNKRLKEATCK---- 117
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---RED 255
L+F Y+ H GI++RDLKPENVL+ ED
Sbjct: 118 ------------------LYF-YQMLLAVQYL-----HENGIIHRDLKPENVLLSSQEED 153
Query: 256 GHIMLSDF 263
I ++DF
Sbjct: 154 CLIKITDF 161
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 355 KSFVGTHEYLAPEV---ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
++ GT YLAPEV + G+ AVD W+LGV L+ L G PF + +T ++ LK
Sbjct: 173 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVS-LK 228
Query: 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
+T + E K DL+ KLLV +PK R +
Sbjct: 229 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 268
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 44/188 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH-----RADM 138
D + + + LGSG G V L R + A+K++ + AI +
Sbjct: 9 DEYIMSKTLGSGACGEVKLAFERKTCKKV-----AIKIISKRKFAIGSAREADPALNVET 63
Query: 139 EKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
E IL L+HP + + F+A Y +V+E GG+L+ + KR ++ K
Sbjct: 64 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF--DKVVGNKRLKEATCK---- 116
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---RED 255
L+F Y+ H GI++RDLKPENVL+ ED
Sbjct: 117 ------------------LYF-YQMLLAVQYL-----HENGIIHRDLKPENVLLSSQEED 152
Query: 256 GHIMLSDF 263
I ++DF
Sbjct: 153 CLIKITDF 160
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 355 KSFVGTHEYLAPEV---ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
++ GT YLAPEV + G+ AVD W+LGV L+ L G PF + + LK
Sbjct: 313 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVS----LK 368
Query: 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
+T + E K DL+ KLLV +PK R +
Sbjct: 369 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 408
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 75/188 (39%), Gaps = 44/188 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH-----RADM 138
D + + + LGSG G V L R + A++++ + AI +
Sbjct: 149 DEYIMSKTLGSGACGEVKLAFERKTCKKV-----AIRIISKRKFAIGSAREADPALNVET 203
Query: 139 EKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
E IL L+HP + + F+A Y +V+E GG+L+ + KR ++ K
Sbjct: 204 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELFD--KVVGNKRLKEATCK---- 256
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---RED 255
L+F H GI++RDLKPENVL+ ED
Sbjct: 257 ------------------LYF------YQMLLAVQYLHENGIIHRDLKPENVLLSSQEED 292
Query: 256 GHIMLSDF 263
I ++DF
Sbjct: 293 CLIKITDF 300
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 355 KSFVGTHEYLAPEV---ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
++ GT YLAPEV + G+ AVD W+LGV L+ L G PF + +T ++ LK
Sbjct: 174 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVS-LK 229
Query: 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGS 451
+T + E K DL+ KLLV +PK R +
Sbjct: 230 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 269
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 44/188 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH-----RADM 138
D + + + LGSG G V L R + A+K++ + AI +
Sbjct: 10 DEYIMSKTLGSGACGEVKLAFERKTCKKV-----AIKIISKRKFAIGSAREADPALNVET 64
Query: 139 EKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
E IL L+HP + + F+A Y +V+E GG+L+ + KR ++ K
Sbjct: 65 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF--DKVVGNKRLKEATCK---- 117
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---RED 255
L+F Y+ H GI++RDLKPENVL+ ED
Sbjct: 118 ------------------LYF-YQMLLAVQYL-----HENGIIHRDLKPENVLLSSQEED 153
Query: 256 GHIMLSDF 263
I ++DF
Sbjct: 154 CLIKITDF 161
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL--IN 408
N + K +GT Y+APEV+ G + D W+ GV LY +L GT PF G+N L +
Sbjct: 177 NTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVE 235
Query: 409 ILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
K P+ S +DLI K+L +P RI
Sbjct: 236 TGKYAFDLPQWRTISDDA-------KDLIRKMLTFHPSLRI 269
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 94/239 (39%), Gaps = 60/239 (25%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ + ++ LG G G V C+ R + Q YA+KV+++ A A K E +L
Sbjct: 22 ERYNIVCMLGKGSFGEVLKCKDR-----ITQQEYAVKVINK-ASAKNKDTSTILREVELL 75
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXX 203
LDHP + L+ E S +V E GG+L+ ++ KRF A
Sbjct: 76 KKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKR--KRFSEHDA---------- 123
Query: 204 XXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---REDGHIML 260
+ +T H IV+RDLKPEN+L+ +D I +
Sbjct: 124 -ARIIKQVFSGITYM-----------------HKHNIVHRDLKPENILLESKEKDCDIKI 165
Query: 261 SDFDLS--FKCD------------VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLS 305
DF LS F+ + + P++LR EKC + S + +LS
Sbjct: 166 IDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYD-------EKCDVWSAGVILYILLS 217
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 355 KSFVGTHEYLAPEV---ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
++ GT YLAPEV + G+ AVD W+LGV L+ L G PF + +T ++ LK
Sbjct: 180 RTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF---SEHRTQVS-LK 235
Query: 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+T + E K DL+ KLLV +PK R
Sbjct: 236 DQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKAR 272
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 77/188 (40%), Gaps = 44/188 (23%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLH-----RADM 138
D + + + LGSG G V L R + A+K++ + AI +
Sbjct: 16 DEYIMSKTLGSGACGEVKLAFERKTCKKV-----AIKIISKRKFAIGSAREADPALNVET 70
Query: 139 EKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
E IL L+HP + + F+A Y +V+E GG+L+ + KR ++ K
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDYY-IVLELMEGGELF--DKVVGNKRLKEATCK---- 123
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---RED 255
L+F Y+ H GI++RDLKPENVL+ ED
Sbjct: 124 ------------------LYF-YQMLLAVQYL-----HENGIIHRDLKPENVLLSSQEED 159
Query: 256 GHIMLSDF 263
I ++DF
Sbjct: 160 CLIKITDF 167
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 87/226 (38%), Gaps = 74/226 (32%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRPKLSFEAIEKYEKCSIPS 295
H G+++RD+KP N+L+ + H+ ++DF LS SF I + +IP
Sbjct: 126 HSGGLLHRDMKPSNILLNAECHVKVADFGLS-------------RSFVNIRRVTN-NIP- 170
Query: 296 CATPMQPVLSCFSSVSHGXXXXXXAVTVTTIREQVDGDHHDQELLDDPEVVAEPINARSK 355
+I E + DQ +L D
Sbjct: 171 ----------------------------LSINENTENFDDDQPILTD------------- 189
Query: 356 SFVGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
+V T Y APE++ G + +D W+LG L E+L G F G + L I
Sbjct: 190 -YVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERI----- 243
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKR 460
IGV E+V +Q +K +++ SLK VEI++
Sbjct: 244 ----IGVIDFPSNEDVESIQSPFAKTMIE-------SLKEKVEIRQ 278
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 59/118 (50%), Gaps = 17/118 (14%)
Query: 355 KSFVGTHEYLAPEVI------SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
+ GT YLAPE++ + G+G VD W GV L+ +L G+ PF L
Sbjct: 257 RELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRM 316
Query: 409 ILKKPLTFPRIGVSSSKEFEE-VVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
I++ F SS E+++ ++DLIS+LL +P+ R+ + + +H FF+
Sbjct: 317 IMEGQYQF------SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQA----LQHPFFE 364
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 16/78 (20%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVP-KLLRPKLSFEAIEKYEKCSIP 294
H IV+RDLKPEN+L+ ++ I LSDF F C + P + LR E C P
Sbjct: 217 HANNIVHRDLKPENILLDDNMQIRLSDF--GFSCHLEPGEKLR-----------ELCGTP 263
Query: 295 SCATPMQPVLSCFSSVSH 312
P +L C +H
Sbjct: 264 GYLAP--EILKCSMDETH 279
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 10/102 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
+A + VGT ++APE +S G A+D W +GV LY ++G PF E
Sbjct: 191 DALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHS 250
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
I + L FP + E L+DLI+++L KNP+ RI
Sbjct: 251 KIKSQALEFP-----DQPDIAE--DLKDLITRMLDKNPESRI 285
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 24/31 (77%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RD+KP N+LV EDGHI ++DF +S
Sbjct: 154 HYQKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 16/97 (16%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK-----K 412
VGT ++APEV+ + +G VD W GV L+ +L G PF G E+ I+K
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 252
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P + I S+ +DL+ ++L+ +P +RI
Sbjct: 253 PRQWSHISESA----------KDLVRRMLMLDPAERI 279
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 16/97 (16%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK-----K 412
VGT ++APEV+ + +G VD W GV L+ +L G PF G E+ I+K
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 252
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P + I S+ +DL+ ++L+ +P +RI
Sbjct: 253 PRQWSHISESA----------KDLVRRMLMLDPAERI 279
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 16/97 (16%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK-----K 412
VGT ++APEV+ + +G VD W GV L+ +L G PF G E+ I+K
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYG-TKERLFEGIIKGKYKMN 254
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P + I S+ +DL+ ++L+ +P +RI
Sbjct: 255 PRQWSHISESA----------KDLVRRMLMLDPAERI 281
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 355 KSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
K+ G+ Y APEVISG+ + G VD W+ GV LY ML PF E+ NI
Sbjct: 164 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV 223
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
T P+ + LI ++L+ NP RI EI + ++FK
Sbjct: 224 YTLPKFLSPGA---------AGLIKRMLIVNPLNRISIH----EIMQDDWFK 262
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 52/192 (27%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++++++ LG G G V L + G A+K+++++ LA R + E
Sbjct: 7 IGNYQIVKTLGEGSFGKVKLAY--HTTTGQK---VALKIINKKVLAKSDMQGRIEREISY 61
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA------ARQRQPGKRF--GISSAK 194
L +L HP + LY ++ +V+EY G +L+ Q +RF I SA
Sbjct: 62 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISA- 119
Query: 195 XXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRE 254
H IV+RDLKPEN+L+ E
Sbjct: 120 -------------------------------------VEYCHRHKIVHRDLKPENLLLDE 142
Query: 255 DGHIMLSDFDLS 266
++ ++DF LS
Sbjct: 143 HLNVKIADFGLS 154
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 355 KSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
K+ G+ Y APEVISG+ + G VD W+ GV LY ML PF E+ NI
Sbjct: 160 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV 219
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
T P+ + LI ++L+ NP RI EI + ++FK
Sbjct: 220 YTLPKFLSPGA---------AGLIKRMLIVNPLNRISIH----EIMQDDWFK 258
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 77/192 (40%), Gaps = 52/192 (27%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++++++ LG G G V L + G A+K+++++ LA R + E
Sbjct: 3 IGNYQIVKTLGEGSFGKVKLAY--HTTTGQK---VALKIINKKVLAKSDMQGRIEREISY 57
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA------ARQRQPGKRF--GISSAK 194
L +L HP + LY ++ +V+EY G +L+ Q +RF I SA
Sbjct: 58 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISA- 115
Query: 195 XXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRE 254
H IV+RDLKPEN+L+ E
Sbjct: 116 -------------------------------------VEYCHRHKIVHRDLKPENLLLDE 138
Query: 255 DGHIMLSDFDLS 266
++ ++DF LS
Sbjct: 139 HLNVKIADFGLS 150
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 64/136 (47%), Gaps = 21/136 (15%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399
L D V + I++ + SFVGT Y++PE + G + D W++G+ L EM G P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPP 205
Query: 400 ENNEKT----------LINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
+ ++ L I+ +P GV S ++ QD ++K L+KNP +R
Sbjct: 206 PDAKEDSRPPMAIFELLDYIVNEPPPKLPSGVFS-------LEFQDFVNKCLIKNPAER- 257
Query: 450 GSLKGSVEIKRHEFFK 465
LK ++ H F K
Sbjct: 258 ADLK---QLMVHAFIK 270
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
I++RD+KP N+LV G I L DF +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 61/129 (47%), Gaps = 15/129 (11%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
++ + +GT +YL+PE G + D ++LG LYE+L G PF G++ + +++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQHVRE 234
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 472
P S++ L ++ K L KNP+ R + + E++ + +
Sbjct: 235 DPIPP-----SARHEGLSADLDAVVLKALAKNPENR---YQTAAEMR-------ADLVRV 279
Query: 473 RSIKPPEVP 481
+ +PPE P
Sbjct: 280 HNGEPPEAP 288
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RD+KP N+++ + + DF ++
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 355 KSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
K+ G+ Y APEVISG+ + G VD W+ GV LY ML PF E+ NI
Sbjct: 169 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV 228
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
T P+ + LI ++L+ NP RI EI + ++FK
Sbjct: 229 YTLPKFLSPGA---------AGLIKRMLIVNPLNRISIH----EIMQDDWFK 267
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 76/190 (40%), Gaps = 48/190 (25%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++++++ LG G G V L + G A+K+++++ LA R + E
Sbjct: 12 IGNYQIVKTLGEGSFGKVKLAY--HTTTGQK---VALKIINKKVLAKSDMQGRIEREISY 66
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQR---QPGKRFGISSAKXX 196
L +L HP + LY ++ +V+EY G +L+ R + Q +RF
Sbjct: 67 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRF-------- 117
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
H IV+RDLKPEN+L+ E
Sbjct: 118 ----------------------------FQQIISAVEYCHRHKIVHRDLKPENLLLDEHL 149
Query: 257 HIMLSDFDLS 266
++ ++DF LS
Sbjct: 150 NVKIADFGLS 159
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 52/112 (46%), Gaps = 14/112 (12%)
Query: 355 KSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
K+ G+ Y APEVISG+ + G VD W+ GV LY ML PF E+ NI
Sbjct: 170 KTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGV 229
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
T P+ + LI ++L+ NP RI EI + ++FK
Sbjct: 230 YTLPKFLSPGA---------AGLIKRMLIVNPLNRISIH----EIMQDDWFK 268
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 74/190 (38%), Gaps = 48/190 (25%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+ ++++++ LG G G V L + G A+K+++++ LA R + E
Sbjct: 13 IGNYQIVKTLGEGSFGKVKLAY--HTTTGQK---VALKIINKKVLAKSDMQGRIEREISY 67
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYA------ARQRQPGKRFGISSAKXX 196
L +L HP + LY ++ +V+EY G +L+ Q +RF
Sbjct: 68 LRLLRHPHIIKLYDVIKSKDEIIMVIEYA-GNELFDYIVQRDKMSEQEARRF-------- 118
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
H IV+RDLKPEN+L+ E
Sbjct: 119 ----------------------------FQQIISAVEYCHRHKIVHRDLKPENLLLDEHL 150
Query: 257 HIMLSDFDLS 266
++ ++DF LS
Sbjct: 151 NVKIADFGLS 160
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 58/114 (50%), Gaps = 12/114 (10%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
+ K VGT ++APEVIS +G+ VD W+LG+ + EM+ G P+ E + + I +
Sbjct: 197 KRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI--R 254
Query: 413 PLTFPRIGVSSSKEFEEVVK-LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
PR+ K+ +V L+ + +LV+ P +R + E+ H F K
Sbjct: 255 DSLPPRV-----KDLHKVSSVLRGFLDLMLVREPSQR----ATAQELLGHPFLK 299
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDF 263
H G+++RD+K +++L+ DG I LSDF
Sbjct: 158 HNQGVIHRDIKSDSILLTSDGRIKLSDF 185
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 18/114 (15%)
Query: 355 KSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
++ G+ Y APEVISG+ + G VD W+ GV LY +L GT PF E+ P
Sbjct: 168 RTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH----------VP 217
Query: 414 LTFPRI--GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
F +I GV E+ + L+ +L +P KR ++K +I+ HE+FK
Sbjct: 218 TLFKKIRGGVFYIPEYLN-RSVATLLMHMLQVDPLKR-ATIK---DIREHEWFK 266
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 35/191 (18%)
Query: 76 RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHR 135
+ GRV + H+ L LG G G V + + + L A+K+++R+ + + +
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQ-----LTGHKVAVKILNRQKIRSLDVVGK 57
Query: 136 ADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKX 195
E L + HP + LY +VMEY GG+L+ + G+ + + +
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRL 116
Query: 196 XXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRED 255
F HM +V+RDLKPENVL+
Sbjct: 117 ---------------------------FQQILSAVDYCHRHM--VVHRDLKPENVLLDAH 147
Query: 256 GHIMLSDFDLS 266
+ ++DF LS
Sbjct: 148 MNAKIADFGLS 158
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 57/110 (51%), Gaps = 18/110 (16%)
Query: 359 GTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP 417
G+ Y APEVISG+ + G VD W+ GV LY +L GT PF E+ P F
Sbjct: 172 GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEH----------VPTLFK 221
Query: 418 RI--GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
+I GV E+ + L+ +L +P KR ++K +I+ HE+FK
Sbjct: 222 KIRGGVFYIPEYLN-RSVATLLMHMLQVDPLKR-ATIK---DIREHEWFK 266
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 75/191 (39%), Gaps = 35/191 (18%)
Query: 76 RAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHR 135
+ GRV + H+ L LG G G V + + + L A+K+++R+ + + +
Sbjct: 3 KHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQ-----LTGHKVAVKILNRQKIRSLDVVGK 57
Query: 136 ADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKX 195
E L + HP + LY +VMEY GG+L+ + G+ + + +
Sbjct: 58 IKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH-GRVEEMEARRL 116
Query: 196 XXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRED 255
F HM +V+RDLKPENVL+
Sbjct: 117 ---------------------------FQQILSAVDYCHRHM--VVHRDLKPENVLLDAH 147
Query: 256 GHIMLSDFDLS 266
+ ++DF LS
Sbjct: 148 MNAKIADFGLS 158
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 350 INARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLIN 408
+ + +F G+ Y APE+ G+ + G VD W+LGV LY ++ G+ PF G+N ++
Sbjct: 166 VGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRER 225
Query: 409 ILKKPLTFP 417
+L+ P
Sbjct: 226 VLRGKYRIP 234
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 79/198 (39%), Gaps = 46/198 (23%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL--AIRKKLHRADMEK 140
+ ++RL + +G G+ V L R+ + G A+K++D+ L +KL R E
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLA--RHVLTGRE---VAVKIIDKTQLNPTSLQKLFR---EV 65
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQPGKRFGISSAKXXX 197
I+ +L+HP + L+ E LVMEY GG+++ A R K
Sbjct: 66 RIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKE---------- 115
Query: 198 XXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGH 257
R H IV+RDLK EN+L+ D +
Sbjct: 116 -----------------------ARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDGDMN 152
Query: 258 IMLSDFDLSFKCDVVPKL 275
I ++DF S + V KL
Sbjct: 153 IKIADFGFSNEFTVGNKL 170
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 360 THEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRI 419
T ++APEV+ QG+ +A D W+LGV LY L G TPF + T IL + + +
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPF-ANGPDDTPEEILAR-IGSGKF 240
Query: 420 GVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
+S +DL+SK L +P +R+
Sbjct: 241 SLSGGYWNSVSDTAKDLVSKXLHVDPHQRL 270
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 79/210 (37%), Gaps = 49/210 (23%)
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
+A+K++D+ K + +++L HP + TL ++ Y +V E GG+L
Sbjct: 50 FAVKIIDKS------KRDPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGGEL 103
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXH 236
RQ K F A +T Y H
Sbjct: 104 LDKILRQ--KFFSEREASAVLFT---------------ITKTVEY-------------LH 133
Query: 237 MMGIVYRDLKPENVL-VREDGH---IMLSDFDLSFKCDVVPKLLRP---KLSFEAIEKYE 289
G+V+RDLKP N+L V E G+ I + DF + + LL +F A E E
Sbjct: 134 AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLE 193
Query: 290 K------CSIPSCATPMQPVLSCFSSVSHG 313
+ C I S + L+ ++ ++G
Sbjct: 194 RQGYDAACDIWSLGVLLYTXLTGYTPFANG 223
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 56/100 (56%), Gaps = 8/100 (8%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
+ K +GT Y+APEV+ + + D W++GV L+ +L G PF G+ +++ L + K
Sbjct: 194 KMKERLGTAYYIAPEVLRKK-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKG 252
Query: 413 PLTFPRIGVSSSKEFEEVVK-LQDLISKLLVKNPKKRIGS 451
TF S E++ V + +DLI ++L + ++RI +
Sbjct: 253 KYTF------DSPEWKNVSEGAKDLIKQMLQFDSQRRISA 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 93/239 (38%), Gaps = 60/239 (25%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
++ +++LGSG G V LC R+ + + + A+K++ + +++ + E +L +
Sbjct: 39 YQRVKKLGSGAYGEVLLC--RDKVTHVER---AIKIIRKTSVSTSSNSKLLE-EVAVLKL 92
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
LDHP + LY FE LVME GG+L+ + R +
Sbjct: 93 LDHPNIMKLYDFFEDKRNYYLVMECYKGGELF----DEIIHRMKFNEVDAAVIIKQVLSG 148
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---REDGHIMLSD 262
H IV+RDLKPEN+L+ +D I + D
Sbjct: 149 VTYLHKHN--------------------------IVHRDLKPENLLLESKEKDALIKIVD 182
Query: 263 FDLSFKCD--------------VVPKLLRPKLSFEAIEKYEKCSIPSCATPMQPVLSCF 307
F LS + + P++LR K EKC + S + +L+ +
Sbjct: 183 FGLSAVFENQKKMKERLGTAYYIAPEVLRKKYD-------EKCDVWSIGVILFILLAGY 234
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 350 INARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPF 397
IN +++F GT +Y+APE+I +G+G A D W+LG + EM G PF
Sbjct: 176 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 7/109 (6%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399
L D V + I+ + FVGT Y++PE + G + D W++G+ L EM G P
Sbjct: 149 LCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPP 208
Query: 400 ENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ L I+ +P P++ S F ++ QD ++K L+KNP +R
Sbjct: 209 MAIFELLDYIVNEPP--PKL---PSAVFS--LEFQDFVNKCLIKNPAER 250
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 74/194 (38%), Gaps = 44/194 (22%)
Query: 77 AQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL-AIRKKLHR 135
A G + D F + LG+G+ G V+ ++ + GL A K++ E AIR ++ R
Sbjct: 2 ALGELKDDDFEKISELGAGNGGVVF--KVSHKPSGL---VMARKLIHLEIKPAIRNQIIR 56
Query: 136 ADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQ---RQPGKRFGISS 192
E +L + P++ Y F + + ME+ GG L + R P + G
Sbjct: 57 ---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--- 110
Query: 193 AKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV 252
+ + + I++RD+KP N+LV
Sbjct: 111 -------------------KVSIAVIKGLTYLREKHK----------IMHRDVKPSNILV 141
Query: 253 REDGHIMLSDFDLS 266
G I L DF +S
Sbjct: 142 NSRGEIKLCDFGVS 155
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 18/110 (16%)
Query: 359 GTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP 417
G+ Y APEVISG+ + G VD W+ GV LY +L GT PF ++ P F
Sbjct: 177 GSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDH----------VPTLFK 226
Query: 418 RI--GVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
+I G+ + ++ + L+ +L +P KR ++K +I+ HE+FK
Sbjct: 227 KICDGIFYTPQYLNPSVIS-LLKHMLQVDPMKR-ATIK---DIREHEWFK 271
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 35/196 (17%)
Query: 71 MKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIR 130
M ++ GRV + H+ L LG G G V + ++ + G A+K+++R+ +
Sbjct: 3 MAEKQKHDGRVKIGHYILGDTLGVGTFGKVKVG--KHELTGHK---VAVKILNRQKIRSL 57
Query: 131 KKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGI 190
+ + E L + HP + LY +VMEY GG+L+ + G+
Sbjct: 58 DVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKN-GRLDEK 116
Query: 191 SSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENV 250
S + F HM +V+RDLKPENV
Sbjct: 117 ESRRL---------------------------FQQILSGVDYCHRHM--VVHRDLKPENV 147
Query: 251 LVREDGHIMLSDFDLS 266
L+ + ++DF LS
Sbjct: 148 LLDAHMNAKIADFGLS 163
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 80/193 (41%), Gaps = 35/193 (18%)
Query: 282 FEAIEKYEKCSIP--SCATPMQPVLSCFSSVSHGXXXXXXAVTVTTIREQVDG-----DH 334
F ++K C IP ++ VL+ FS + + V + I +G D
Sbjct: 137 FFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDF 196
Query: 335 HDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQG--HGSAVDWWTLGVFLYEMLY 392
+ E + D ++ K GT+E++ PE S + +G+ VD W+LG+ LY M Y
Sbjct: 197 GESEYMVDKKI---------KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFY 247
Query: 393 GTTPFKGENNEKTLINILKK--------------PLTFPRIGVSSSKEFEEVVKLQDLIS 438
PF + + L N ++ PLT + S++ E + D +
Sbjct: 248 NVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDI---DFLK 304
Query: 439 KLLVKNPKKRIGS 451
L KNP +RI S
Sbjct: 305 LFLRKNPAERITS 317
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDF 263
I +RD+KP N+L+ ++G + LSDF
Sbjct: 172 NICHRDVKPSNILMDKNGRVKLSDF 196
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 350 INARSKSFVGTHEYLAPEVISG--QGHGSAVDWWTLGVFLYEMLYGTTPF 397
IN +++F GT +Y+APE+I +G+G A D W+LG + EM G PF
Sbjct: 162 INPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 351 NARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
N + GT Y+APEV++ + + AVD W++GV Y +L G PF E K I
Sbjct: 161 NGIMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIK 220
Query: 411 KKPLTFPRIGVSSSKEFEEVVK-LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINW 469
+ F S ++++ + +D I LL K+P +R K H + G N
Sbjct: 221 EGYYEF------ESPFWDDISESAKDFICHLLEKDPNERYTCEKA----LSHPWIDG-NT 269
Query: 470 ALIRSIKP 477
AL R I P
Sbjct: 270 ALHRDIYP 277
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 41/184 (22%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F + LGSG V+L + R L +A+K + +++ A R + E +L
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQR-----LTGKLFALKCI-KKSPAFRDS--SLENEIAVLKK 62
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
+ H + TL +E++ + LVM+ GG+L+ + G+ + K
Sbjct: 63 IKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILER-----GVYTEK----------- 106
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV---REDGHIMLSD 262
D +L H GIV+RDLKPEN+L E+ IM++D
Sbjct: 107 --------DASLVIQ------QVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITD 152
Query: 263 FDLS 266
F LS
Sbjct: 153 FGLS 156
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 351 NARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409
N K+FVGT ++APEV+ +G+ D W+ G+ E+ G P+ K L+
Sbjct: 175 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 234
Query: 410 LKKPLTFPRIGVSSSKEFEEVVK-LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
L+ GV + ++ K + +IS L K+P+KR + E+ RH+FF+
Sbjct: 235 LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR----PTAAELLRHKFFQ 287
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H G ++RD+K N+L+ EDG + ++DF +S
Sbjct: 133 HKNGQIHRDVKAGNILLGEDGSVQIADFGVS 163
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 13/118 (11%)
Query: 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYE 389
+D D +Q +L P AR VGT Y++PE I G + VD ++LG+ L+E
Sbjct: 168 MDQDEEEQTVL-----TPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222
Query: 390 MLYGTTPFKGENNE-KTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPK 446
+LY PF + +TL ++ + L FP + + K E V +QD++S ++ P+
Sbjct: 223 LLY---PFSTQMERVRTLTDV--RNLKFP--PLFTQKYPCEYVMVQDMLSPSPMERPE 273
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H G+++RDLKP N+ D + + DF L D
Sbjct: 135 HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 169
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
++ + +GT +YL+PE G + D ++LG LYE+L G PF G++ +++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 472
P S++ L ++ K L KNP+ R + + E++ + +
Sbjct: 235 DPIPP-----SARHEGLSADLDAVVLKALAKNPENR---YQTAAEMR-------ADLVRV 279
Query: 473 RSIKPPEVP 481
+ +PPE P
Sbjct: 280 HNGEPPEAP 288
Score = 32.0 bits (71), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RD+KP N+L+ + + DF ++
Sbjct: 133 HQNGIIHRDVKPANILISATNAVKVVDFGIA 163
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 351 NARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI 409
N K+FVGT ++APEV+ +G+ D W+ G+ E+ G P+ K L+
Sbjct: 180 NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLT 239
Query: 410 LKKPLTFPRIGVSSSKEFEEVVK-LQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
L+ GV + ++ K + +IS L K+P+KR + E+ RH+FF+
Sbjct: 240 LQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR----PTAAELLRHKFFQ 292
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H G ++RD+K N+L+ EDG + ++DF +S
Sbjct: 138 HKNGQIHRDVKAGNILLGEDGSVQIADFGVS 168
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
++ + +GT +YL+PE G + D ++LG LYE+L G PF G++ +++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 472
P S++ L ++ K L KNP+ R + + E++ + +
Sbjct: 235 DPIPP-----SARHEGLSADLDAVVLKALAKNPENR---YQTAAEMR-------ADLVRV 279
Query: 473 RSIKPPEVP 481
+ +PPE P
Sbjct: 280 HNGEPPEAP 288
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RD+KP N+++ + + DF ++
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 10/96 (10%)
Query: 355 KSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
++ G+ Y APE+I G+ + GS D W++G+ LY ++ G PF +N I++
Sbjct: 167 QTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGK 226
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P+ SS L+ ++L +PKKRI
Sbjct: 227 YDVPKWLSPSSIL---------LLQQMLQVDPKKRI 253
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 69/187 (36%), Gaps = 39/187 (20%)
Query: 83 LDHFRLLRRLGSGDIGNVYL-CQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
L ++ L +G+G V L C I L A+K++D+ L L R E
Sbjct: 9 LKYYELHETIGTGGFAKVKLACHI------LTGEMVAIKIMDKNTLG--SDLPRIKTEIE 60
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
L L H + LY E ++ +V+EYCPGG+L+ + IS +
Sbjct: 61 ALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELF---------DYIISQDRLSEEET- 110
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
R H G +RDLKPEN+L E + L
Sbjct: 111 --------------------RVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLI 150
Query: 262 DFDLSFK 268
DF L K
Sbjct: 151 DFGLCAK 157
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 101
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 102 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 262 DFDLS 266
DF L+
Sbjct: 148 DFGLA 152
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 229 NPWKKIDSAPLA----------------LLHKILVENPSARI 254
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
++ + +GT +YL+PE G + D ++LG LYE+L G PF G++ +++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 472
P S++ L ++ K L KNP+ R + + E++ + +
Sbjct: 235 DPIPP-----SARHEGLSADLDAVVLKALAKNPENR---YQTAAEMR-------ADLVRV 279
Query: 473 RSIKPPEVP 481
+ +PPE P
Sbjct: 280 HNGEPPEAP 288
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RD+KP N+++ + + DF ++
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 15/129 (11%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
++ + +GT +YL+PE G + D ++LG LYE+L G PF G++ +++
Sbjct: 175 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 234
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGINWALI 472
P S++ L ++ K L KNP+ R + + E++ + +
Sbjct: 235 DPIPP-----SARHEGLSADLDAVVLKALAKNPENR---YQTAAEMR-------ADLVRV 279
Query: 473 RSIKPPEVP 481
+ +PPE P
Sbjct: 280 HNGEPPEAP 288
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RD+KP N+++ + + DF ++
Sbjct: 133 HQNGIIHRDVKPANIMISATNAVKVMDFGIA 163
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 101
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 102 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 262 DFDLS 266
DF L+
Sbjct: 148 DFGLA 152
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 229 NPWKKIDSAPLA----------------LLHKILVENPSARI 254
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 101
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 102 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 262 DFDLS 266
DF L+
Sbjct: 148 DFGLA 152
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 229 NPWKKIDSAPLA----------------LLHKILVENPSARI 254
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 101
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 102 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 262 DFDLS 266
DF L+
Sbjct: 148 DFGLA 152
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 229 NPWKKIDSAPLA----------------LLHKILVENPSARI 254
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
++ + +GT +YL+PE G + D ++LG LYE+L G PF G++ +++
Sbjct: 192 QTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVRE 251
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
P S++ L ++ K L KNP+ R
Sbjct: 252 DPIPP-----SARHEGLSADLDAVVLKALAKNPENR 282
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 10/31 (32%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RD+KP N+++ + + DF ++
Sbjct: 150 HQNGIIHRDVKPANIMISATNAVKVMDFGIA 180
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF- 416
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ + K+ T+
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKKTYL 227
Query: 417 -PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P + S+ L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAP--------LALLHKILVENPSARI 253
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIX 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 352 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE 400
++ +GT +Y +PE G+ D +++G+ LYEML G PF GE
Sbjct: 167 TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 36/190 (18%), Positives = 70/190 (36%), Gaps = 39/190 (20%)
Query: 79 GRVGLDHFRLLRRLGSGDIGNVYLCQ--IRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
G++ + ++++ +LG G + VYL + I N V + F + + +++H +
Sbjct: 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS 65
Query: 137 DMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXX 196
+ L H + ++ E LVMEY G L +
Sbjct: 66 -------SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH------------- 105
Query: 197 XXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDG 256
D + F + H M IV+RD+KP+N+L+ +
Sbjct: 106 ------------GPLSVDTAINFTNQILDGIKHA-----HDMRIVHRDIKPQNILIDSNK 148
Query: 257 HIMLSDFDLS 266
+ + DF ++
Sbjct: 149 TLKIFDFGIA 158
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 58 INAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 101
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 102 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 262 DFDLS 266
DF L+
Sbjct: 148 DFGLA 152
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 229 NPWKKIDSAPLA----------------LLHKILVENPSARI 254
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 358 VGTHEYLAPEVISGQGHGSAV-----DWWTLGVFLYEMLYGTTPFKGENNEK-------- 404
G+ EY+APEV+ +++ D W+LGV LY +L G PF G
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241
Query: 405 --TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462
N+L + + + +DLISKLLV++ K+R+ + ++ +H
Sbjct: 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHP 297
Query: 463 FFKG 466
+ +G
Sbjct: 298 WVQG 301
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 11/59 (18%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM---LSDFD------LSFKCDVV--PKLLRPKLSFE 283
H GI +RDLKPEN+L + + DFD L+ C + P+LL P S E
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAE 186
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 55
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 56 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 99
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 100 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 145
Query: 262 DFDLS 266
DF L+
Sbjct: 146 DFGLA 150
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 167 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 226
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 227 NPWKKIDSAPLA----------------LLHKILVENPSARI 252
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIX 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 358 VGTHEYLAPEVISGQGHGSAV-----DWWTLGVFLYEMLYGTTPFKGENNEK-------- 404
G+ EY+APEV+ +++ D W+LGV LY +L G PF G
Sbjct: 182 CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA 241
Query: 405 --TLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHE 462
N+L + + + +DLISKLLV++ K+R+ + ++ +H
Sbjct: 242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRL----SAAQVLQHP 297
Query: 463 FFKG 466
+ +G
Sbjct: 298 WVQG 301
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 11/59 (18%)
Query: 236 HMMGIVYRDLKPENVLVREDGHI---------MLSDFDLSFKCDVV--PKLLRPKLSFE 283
H GI +RDLKPEN+L + + S L+ C + P+LL P S E
Sbjct: 128 HNKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAE 186
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIX 57
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 101
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 102 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 262 DFDLS 266
DF L+
Sbjct: 148 DFGLA 152
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 229 NPWKKIDSAPLA----------------LLHKILVENPSARI 254
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN-------------- 402
+V T Y APEVI G G+ VD W++G + E++ G+ F+G ++
Sbjct: 183 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTP 242
Query: 403 --------EKTLINILKKPLTFPRIGV-----------SSSKEFEEVVKLQDLISKLLVK 443
+ T+ N ++ +P I S ++ + + +DL+SK+LV
Sbjct: 243 SAEFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 302
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 303 DPDKRIS 309
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 171
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 101
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 102 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 262 DFDLS 266
DF L+
Sbjct: 148 DFGLA 152
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 229 NPWKKIDSAPLA----------------LLHKILVENPSARI 254
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 56
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 100
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 101 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 146
Query: 262 DFDLS 266
DF L+
Sbjct: 147 DFGLA 151
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 168 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 227
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 228 NPWKKIDSAPLA----------------LLHKILVENPSARI 253
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 39/185 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVD-REALAIRKKLHRADMEKV 141
++ + L++ LG G G V L R + + A+K+VD + A+ + + + E
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNR-----VTEEAVAVKIVDMKRAVDCPENIKK---EIC 57
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
I ML+H + Y + L +EYC GG+L+ + G
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIG---------------- 101
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
D FF+ H +GI +RD+KPEN+L+ E ++ +S
Sbjct: 102 --------MPEPDAQRFFH------QLMAGVVYLHGIGITHRDIKPENLLLDERDNLKIS 147
Query: 262 DFDLS 266
DF L+
Sbjct: 148 DFGLA 152
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 27/102 (26%)
Query: 359 GTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENN----------EKTLI 407
GT Y+APE++ + H VD W+ G+ L ML G P+ ++ +KT +
Sbjct: 169 GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYL 228
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
N KK + P L+ K+LV+NP RI
Sbjct: 229 NPWKKIDSAPLA----------------LLHKILVENPSARI 254
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
+ S VGT Y++PE I G+ D W+LG LYEM +PF G+ + L ++ KK
Sbjct: 193 AHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD--KMNLYSLCKKI 250
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+ S EE L+ L++ + +P+KR
Sbjct: 251 EQCDYPPLPSDHYSEE---LRQLVNMCINPDPEKR 282
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 9/111 (8%)
Query: 68 WEAMKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL 127
++ K LR G L +FR+ +++G G VY + G+P +++ D
Sbjct: 16 FQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACL--LDGVPVALKKVQIFD---- 69
Query: 128 AIRKKLHRADMEKVI--LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
+ RAD K I L L+HP + YA F + +V+E GDL
Sbjct: 70 -LMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVI-SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404
+A +A +V T Y APEVI S + VD W++G + EML G T FKG++
Sbjct: 172 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 231
Query: 405 TLINILK 411
L ILK
Sbjct: 232 QLTQILK 238
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H G+V+RDLKP N+ V ED + + DF L+ D
Sbjct: 143 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 177
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 57/127 (44%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN-------------- 402
+V T Y APEVI G G+ + VD W++G + E++ G F+G ++
Sbjct: 185 YVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTP 244
Query: 403 --------EKTLINILKKPLTFPRIGV-----------SSSKEFEEVVKLQDLISKLLVK 443
+ T+ N ++ +P I S ++ + + +DL+SK+LV
Sbjct: 245 SAEFMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 305 DPDKRIS 311
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVI-SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404
+A +A +V T Y APEVI S + VD W++G + EML G T FKG++
Sbjct: 190 LARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD 249
Query: 405 TLINILK 411
L ILK
Sbjct: 250 QLTQILK 256
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H G+V+RDLKP N+ V ED + + DF L+ D
Sbjct: 161 HSAGVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 31/129 (24%)
Query: 359 GTHEYLAPEVI-----SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN----------- 402
G+ EY+APEV+ + D W+LGV LY ML G PF G
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVC 242
Query: 403 ----EKTLINILKKPLTFPRIGVSSSKEFEEV-VKLQDLISKLLVKNPKKRIGSLKGSVE 457
K +I + FP K++ + + +DLISKLLV++ K+R+ + +
Sbjct: 243 RVCQNKLFESIQEGKYEFP------DKDWAHISSEAKDLISKLLVRDAKQRL----SAAQ 292
Query: 458 IKRHEFFKG 466
+ +H + +G
Sbjct: 293 VLQHPWVQG 301
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 59/153 (38%), Gaps = 35/153 (22%)
Query: 117 YAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
YA+K+++++A R ++ R ++E + + L L FE LV E GG +
Sbjct: 41 YAVKIIEKQAGHSRSRVFR-EVETLYQCQGNKNIL-ELIEFFEDDTRFYLVFEKLQGGSI 98
Query: 177 YAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXH 236
A Q+Q K F A DV ++ H
Sbjct: 99 LAHIQKQ--KHFNEREASRVVR---------------DVAAALDF-------------LH 128
Query: 237 MMGIVYRDLKPENVLVREDGHIM---LSDFDLS 266
GI +RDLKPEN+L + + DFDL
Sbjct: 129 TKGIAHRDLKPENILCESPEKVSPVKICDFDLG 161
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 58/111 (52%), Gaps = 14/111 (12%)
Query: 355 KSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
K+ G+ Y APEVI+G+ + G VD W+ G+ LY ML G PF +++ + N+ KK
Sbjct: 165 KTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPF----DDEFIPNLFKKV 220
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFF 464
+ V +F Q LI +++V +P +RI EI+R +F
Sbjct: 221 NS----CVYVMPDFLS-PGAQSLIRRMIVADPMQRITIQ----EIRRDPWF 262
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 68/181 (37%), Gaps = 48/181 (26%)
Query: 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL 151
LG G G V L Q A+K + R+ L R + E L +L HP +
Sbjct: 17 LGEGSFGKVKLATHYKT-----QQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHI 71
Query: 152 PTLYAEFEASHYSCLVMEYCPGGDLY---AARQRQP---GKRFGISSAKXXXXXXXXXXX 205
LY +V+EY GG+L+ ++R G+RF
Sbjct: 72 IKLYDVITTPTDIVMVIEYA-GGELFDYIVEKKRMTEDEGRRF----------------- 113
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
+ Y H IV+RDLKPEN+L+ ++ ++ ++DF L
Sbjct: 114 ------FQQIICAIEY-------------CHRHKIVHRDLKPENLLLDDNLNVKIADFGL 154
Query: 266 S 266
S
Sbjct: 155 S 155
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 356 SFVGTHEYLAPEVI----SGQGHGSAV-------DWWTLGVFLYEMLYGTTPFKGENNEK 404
S VGT Y+ PE I S + +G + D W+LG LY M YG TPF+ N+
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 405 TLINILKKP---LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG 450
+ ++ + P + FP I LQD++ L ++PK+RI
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKD---------LQDVLKCCLKRDPKQRIS 314
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GIV+ DLKP N L+ DG + L DF ++
Sbjct: 172 HQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
+++ +GT YL+PE+ + + + D W LG LYE+ F+ + + ++ I+
Sbjct: 182 ARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISG- 240
Query: 414 LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+FP + + S + L+ L+S+L +NP+ R
Sbjct: 241 -SFPPVSLHYSYD------LRSLVSQLFKRNPRDR 268
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 81/208 (38%), Gaps = 44/208 (21%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
++ + L+++G G G L +++ G Y +K ++ ++ +++ + E +
Sbjct: 23 MEKYVRLQKIGEGSFGKAIL--VKSTEDGRQ---YVIKEINISRMSSKER-EESRREVAV 76
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXX 202
L + HP + FE + +VM+YC GGDL+ Q G F
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLF-------------- 122
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSD 262
+ L + H I++RD+K +N+ + +DG + L D
Sbjct: 123 -QEDQILDWFVQICLALKH-------------VHDRKILHRDIKSQNIFLTKDGTVQLGD 168
Query: 263 F----------DLSFKCDVVPKLLRPKL 280
F +L+ C P L P++
Sbjct: 169 FGIARVLNSTVELARACIGTPYYLSPEI 196
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 356 SFVGTHEYLAPEVI----SGQGHGSAV-------DWWTLGVFLYEMLYGTTPFKGENNEK 404
S VGT Y+ PE I S + +G + D W+LG LY M YG TPF+ N+
Sbjct: 171 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 230
Query: 405 TLINILKKP---LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG 450
+ ++ + P + FP I LQD++ L ++PK+RI
Sbjct: 231 SKLHAIIDPNHEIEFPDIPEKD---------LQDVLKCCLKRDPKQRIS 270
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GIV+ DLKP N L+ DG + L DF ++
Sbjct: 128 HQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 157
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 356 SFVGTHEYLAPEVI----SGQGHGSAV-------DWWTLGVFLYEMLYGTTPFKGENNEK 404
S VGT Y+ PE I S + +G + D W+LG LY M YG TPF+ N+
Sbjct: 215 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 405 TLINILKKP---LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
+ ++ + P + FP I LQD++ L ++PK+RI
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKD---------LQDVLKCCLKRDPKQRI 313
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GIV+ DLKP N L+ DG + L DF ++
Sbjct: 172 HQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 356 SFVGTHEYLAPEVI----SGQGHGSAV-------DWWTLGVFLYEMLYGTTPFKGENNEK 404
S VGT Y+ PE I S + +G + D W+LG LY M YG TPF+ N+
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 405 TLINILKKP---LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG 450
+ ++ + P + FP I LQD++ L ++PK+RI
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKD---------LQDVLKCCLKRDPKQRIS 286
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GIV+ DLKP N L+ DG + L DF ++
Sbjct: 144 HQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 356 SFVGTHEYLAPEVI----SGQGHGSAV-------DWWTLGVFLYEMLYGTTPFKGENNEK 404
S VGT Y+ PE I S + +G + D W+LG LY M YG TPF+ N+
Sbjct: 187 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 246
Query: 405 TLINILKKP---LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG 450
+ ++ + P + FP I LQD++ L ++PK+RI
Sbjct: 247 SKLHAIIDPNHEIEFPDIPEKD---------LQDVLKCCLKRDPKQRIS 286
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GIV+ DLKP N L+ DG + L DF ++
Sbjct: 144 HQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 173
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 52/108 (48%), Gaps = 23/108 (21%)
Query: 356 SFVGTHEYLAPEVI----SGQGHGSAV-------DWWTLGVFLYEMLYGTTPFKGENNEK 404
S VGT Y+ PE I S + +G + D W+LG LY M YG TPF+ N+
Sbjct: 167 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 226
Query: 405 TLINILKKP---LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
+ ++ + P + FP I LQD++ L ++PK+RI
Sbjct: 227 SKLHAIIDPNHEIEFPDIPEKD---------LQDVLKCCLKRDPKQRI 265
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GIV+ DLKP N L+ DG + L DF ++
Sbjct: 124 HQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 153
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 29/62 (46%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
S G + ++APEVI D W+ GV L+E+L G PF+G + + L
Sbjct: 173 SAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLA 232
Query: 416 FP 417
P
Sbjct: 233 LP 234
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 23/109 (21%)
Query: 356 SFVGTHEYLAPEVI----SGQGHGSAV-------DWWTLGVFLYEMLYGTTPFKGENNEK 404
S VGT Y+ PE I S + +G + D W+LG LY M YG TPF+ N+
Sbjct: 168 SQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 227
Query: 405 TLINILKKP---LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIG 450
+ ++ + P + FP I LQD++ L ++PK+RI
Sbjct: 228 SKLHAIIDPNHEIEFPDIPEKD---------LQDVLKCCLKRDPKQRIS 267
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GIV+ DLKP N L+ DG + L DF ++
Sbjct: 125 HQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 154
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
+++ + Y APE+I G H +AVD W++G EM+ G F+G+N+ L I++
Sbjct: 190 AYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVR 246
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 238 MGIVYRDLKPENVLVRE-DGHIMLSDF 263
+ + +RD+KP NVLV E DG + L DF
Sbjct: 150 VNVCHRDIKPHNVLVNEADGTLKLCDF 176
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
FVGT +YLAPE++ + + VD+W+ G +E + G PF
Sbjct: 184 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 17/99 (17%)
Query: 86 FRLLRRLGSGDIGNV--YLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ + RLG+G G V ++ Q V + QC + +RE R +E I+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE---------RWCLEIQIM 67
Query: 144 TMLDHPFL------PTLYAEFEASHYSCLVMEYCPGGDL 176
L+HP + P + + L MEYC GGDL
Sbjct: 68 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDL 106
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
FVGT +YLAPE++ + + VD+W+ G +E + G PF
Sbjct: 183 FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 42/99 (42%), Gaps = 17/99 (17%)
Query: 86 FRLLRRLGSGDIGNV--YLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ + RLG+G G V ++ Q V + QC + +RE R +E I+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRE---------RWCLEIQIM 66
Query: 144 TMLDHPFL------PTLYAEFEASHYSCLVMEYCPGGDL 176
L+HP + P + + L MEYC GGDL
Sbjct: 67 KKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDL 105
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 69/187 (36%), Gaps = 41/187 (21%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D + ++ LG G G VY Q + V A KV+D ++ ++L +E IL
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSV-----LAAAKVIDTKS---EEELEDYMVEIDIL 88
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGG--DLYAARQRQPGKRFGISSAKXXXXXXX 201
DHP + L F + +++E+C GG D +P I
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA- 147
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
NY H I++RDLK N+L DG I L+
Sbjct: 148 -----------------LNY-------------LHDNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 262 DFDLSFK 268
DF +S K
Sbjct: 178 DFGVSAK 184
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 44/102 (43%), Gaps = 13/102 (12%)
Query: 353 RSKSFVGTHEYLAPEVISGQG-----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
R F+GT ++APEV+ + + D W+LG+ L EM P N + L+
Sbjct: 191 RRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 408 NILK-KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
I K +P T + SS +D + K L KN R
Sbjct: 251 KIAKSEPPTLAQPSRWSS-------NFKDFLKKCLEKNVDAR 285
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D V + I++ + SFVGT Y++PE + G + D W++G+ L EM G P
Sbjct: 173 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 78/202 (38%), Gaps = 44/202 (21%)
Query: 69 EAMKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL- 127
EA ++ G + D F + LG+G+ G V+ ++ + GL A K++ E
Sbjct: 18 EAFLTQKQKVGELKDDDFEKISELGAGNGGVVF--KVSHKPSGL---VMARKLIHLEIKP 72
Query: 128 AIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQ---RQP 184
AIR ++ R E +L + P++ Y F + + ME+ GG L + R P
Sbjct: 73 AIRNQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 129
Query: 185 GKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRD 244
+ G S + + + I++RD
Sbjct: 130 EQILGKVS----------------------IAVIKGLTYLREKHK----------IMHRD 157
Query: 245 LKPENVLVREDGHIMLSDFDLS 266
+KP N+LV G I L DF +S
Sbjct: 158 VKPSNILVNSRGEIKLCDFGVS 179
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 11/117 (9%)
Query: 330 VDGDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYE 389
+D D +Q +L P A VGT Y++PE I G + VD ++LG+ L+E
Sbjct: 214 MDQDEEEQTVL-----TPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFE 268
Query: 390 MLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPK 446
+LY + T + LK PL F + K +E + +QD++S + P+
Sbjct: 269 LLYSFSTQMERVRIITDVRNLKFPLLF------TQKYPQEHMMVQDMLSPSPTERPE 319
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H G+++RDLKP N+ D + + DF L D
Sbjct: 181 HSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMD 215
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 69/187 (36%), Gaps = 41/187 (21%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D + ++ LG G G VY Q + V A KV+D ++ ++L +E IL
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSV-----LAAAKVIDTKS---EEELEDYMVEIDIL 88
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGG--DLYAARQRQPGKRFGISSAKXXXXXXX 201
DHP + L F + +++E+C GG D +P I
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA- 147
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
NY H I++RDLK N+L DG I L+
Sbjct: 148 -----------------LNY-------------LHDNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 262 DFDLSFK 268
DF +S K
Sbjct: 178 DFGVSAK 184
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 13/102 (12%)
Query: 353 RSKSFVGTHEYLAPEVISGQG-----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
R SF+GT ++APEV+ + + D W+LG+ L EM P N + L+
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 408 NILK-KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
I K +P T + SS +D + K L KN R
Sbjct: 251 KIAKSEPPTLAQPSRWSS-------NFKDFLKKCLEKNVDAR 285
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 69/187 (36%), Gaps = 41/187 (21%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
D + ++ LG G G VY Q + V A KV+D ++ ++L +E IL
Sbjct: 37 DFWEIIGELGDGAFGKVYKAQNKETSV-----LAAAKVIDTKS---EEELEDYMVEIDIL 88
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGG--DLYAARQRQPGKRFGISSAKXXXXXXX 201
DHP + L F + +++E+C GG D +P I
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA- 147
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
NY H I++RDLK N+L DG I L+
Sbjct: 148 -----------------LNY-------------LHDNKIIHRDLKAGNILFTLDGDIKLA 177
Query: 262 DFDLSFK 268
DF +S K
Sbjct: 178 DFGVSAK 184
Score = 37.0 bits (84), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 13/102 (12%)
Query: 353 RSKSFVGTHEYLAPEVI-----SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
R SF+GT ++APEV+ + + D W+LG+ L EM P N + L+
Sbjct: 191 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 250
Query: 408 NILK-KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
I K +P T + SS +D + K L KN R
Sbjct: 251 KIAKSEPPTLAQPSRWSS-------NFKDFLKKCLEKNVDAR 285
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D V + I++ + SFVGT Y++PE + G + D W++G+ L EM G P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
I++RD+KP N+LV G I L DF +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D V + I++ + SFVGT Y++PE + G + D W++G+ L EM G P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
I++RD+KP N+LV G I L DF +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
S +GT Y+A EV+ G GH +D ++LG+ +EM+Y PF + +NILKK
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PF---STGMERVNILKK-- 240
Query: 415 TFPRIGVSSSKEFEE-VVKLQDLISKLLVK-NPKKRIGS 451
+ + +F++ +K++ I +LL+ +P KR G+
Sbjct: 241 -LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N+ + E ++ + DF L+
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 352 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI-L 410
A+ +GT ++APEVI G+ D W+LG+ EM G P+ + + + I
Sbjct: 180 AKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPT 239
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
P TF + + S D + + LVK+P++R
Sbjct: 240 NPPPTFRKPELWSD-------NFTDFVKQCLVKSPEQR 270
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/184 (19%), Positives = 62/184 (33%), Gaps = 45/184 (24%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F +L +LG G G+VY + ++V + + + L E I+
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKE----------TGQIVAIKQVPVESDLQEIIKEISIMQQ 80
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGG---DLYAARQRQPGKRFGISSAKXXXXXXXX 202
D P + Y + + +VMEYC G D+ R +
Sbjct: 81 CDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNK-------------------- 120
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSD 262
++ H M ++RD+K N+L+ +GH L+D
Sbjct: 121 ------TLTEDEIATILQSTLKGLEYL------HFMRKIHRDIKAGNILLNTEGHAKLAD 168
Query: 263 FDLS 266
F ++
Sbjct: 169 FGVA 172
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 55/99 (55%), Gaps = 12/99 (12%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
S +GT Y+A EV+ G GH +D ++LG+ +EM+Y PF + +NILKK
Sbjct: 189 SAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PF---STGMERVNILKK-- 240
Query: 415 TFPRIGVSSSKEFEE-VVKLQDLISKLLVK-NPKKRIGS 451
+ + +F++ +K++ I +LL+ +P KR G+
Sbjct: 241 -LRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGA 278
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N+ + E ++ + DF L+
Sbjct: 133 HSQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 16/119 (13%)
Query: 352 ARSKSFVGTHEYLAPEVISGQGHGSAV-----DWWTLGVFLYEMLYGTTPFKGENNEKTL 406
R +F+GT ++APEVI+ + A D W+LG+ EM G P + + L
Sbjct: 184 GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRAL 243
Query: 407 INILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
I + P PR+ SK++ + K Q I LVKN +R + ++ +H F +
Sbjct: 244 FLIPRNPA--PRL---KSKKWSK--KFQSFIESCLVKNHSQR----PATEQLMKHPFIR 291
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 23/35 (65%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RD+K +NVL+ E+ + L DF +S + D
Sbjct: 146 HQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD 180
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D V + I++ + SFVGT Y++PE + G + D W++G+ L EM G P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
I++RD+KP N+LV G I L DF +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D V + I++ + SFVGT Y++PE + G + D W++G+ L EM G P
Sbjct: 208 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 77/202 (38%), Gaps = 44/202 (21%)
Query: 69 EAMKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL- 127
EA ++ G + D F + LG+G+ G V+ ++ + GL A K++ E
Sbjct: 53 EAFLTQKQKVGELKDDDFEKISELGAGNGGVVF--KVSHKPSGL---VMARKLIHLEIKP 107
Query: 128 AIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQ---RQP 184
AIR ++ R E +L + P++ Y F + + ME+ GG L + R P
Sbjct: 108 AIRNQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIP 164
Query: 185 GKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRD 244
+ G + + + I++RD
Sbjct: 165 EQILG----------------------KVSIAVIKGLTYLREKHK----------IMHRD 192
Query: 245 LKPENVLVREDGHIMLSDFDLS 266
+KP N+LV G I L DF +S
Sbjct: 193 VKPSNILVNSRGEIKLCDFGVS 214
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
L D V + I++ + SFVGT Y++PE + G + D W++G+ L EM G P
Sbjct: 146 LCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
I++RD+KP N+LV G I L DF +S
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 340 LDDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG 399
L D V + I++ + SFVGT Y+APE + G + D W++G+ L E+ G P
Sbjct: 156 LCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIP- 214
Query: 400 ENNEKTLINILKKPLT 415
+ K L I +P+
Sbjct: 215 PPDAKELEAIFGRPVV 230
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 75/202 (37%), Gaps = 44/202 (21%)
Query: 69 EAMKRLRRAQGRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREAL- 127
EA + G + D F + LG+G+ G V Q R GL A K++ E
Sbjct: 1 EAFLTQKAKVGELKDDDFERISELGAGNGGVVTKVQHRPS--GL---IMARKLIHLEIKP 55
Query: 128 AIRKKLHRADMEKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL---YAARQRQP 184
AIR ++ R E +L + P++ Y F + + ME+ GG L +R P
Sbjct: 56 AIRNQIIR---ELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIP 112
Query: 185 GKRFGISSAKXXXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRD 244
+ G S + + + I++RD
Sbjct: 113 EEILGKVS----------------------IAVLRGLAYLREKHQ----------IMHRD 140
Query: 245 LKPENVLVREDGHIMLSDFDLS 266
+KP N+LV G I L DF +S
Sbjct: 141 VKPSNILVNSRGEIKLCDFGVS 162
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
+V T Y APEVI G G+ VD W++GV + EM+ G F G ++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH 230
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
+V T Y APEVI G G+ VD W++GV + EM+ G F G ++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDH 230
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVS 422
Y+APEV+ + + + D W+LGV +Y +L G PF N + + +K+ + + G
Sbjct: 176 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS-NTGQAISPGMKRRIRLGQYGFP 234
Query: 423 SSKEFEEVVKLQDLISKLLVKNPKKRI 449
+ + E + LI LL +P +R+
Sbjct: 235 NPEWSEVSEDAKQLIRLLLKTDPTERL 261
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVS 422
Y+APEV+ + + + D W+LGV +Y +L G PF N + + +K+ + + G
Sbjct: 195 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYS-NTGQAISPGMKRRIRLGQYGFP 253
Query: 423 SSKEFEEVVKLQDLISKLLVKNPKKRI 449
+ + E + LI LL +P +R+
Sbjct: 254 NPEWSEVSEDAKQLIRLLLKTDPTERL 280
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 306 DPAKRIS 312
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 15/109 (13%)
Query: 359 GTHEYLAPEVISGQG--HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
G+ + PE+ +G G VD W+ GV LY + G PF+G+N K NI K
Sbjct: 173 GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAI 232
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFK 465
P + L DL+ +L P KR S++ +I++H +F+
Sbjct: 233 PG---------DCGPPLSDLLKGMLEYEPAKRF-SIR---QIRQHSWFR 268
Score = 28.5 bits (62), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GIV++D+KP N+L+ G + +S ++
Sbjct: 126 HSQGIVHKDIKPGNLLLTTGGTLKISALGVA 156
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 343 DPAKRIS 349
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
FV T Y APEVI G G+ VD W++G + EM+ G F G ++
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 232
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 305 DPAKRIS 311
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 305 DPAKRIS 311
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
+K+FVGT Y++PE ++ + D W+LG LYE+ PF ++K L +++
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-FSQKELAGKIREG 231
Query: 414 LTFPRIGVSSSKEFEEVV 431
F RI S E E++
Sbjct: 232 -KFRRIPYRYSDELNEII 248
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 184 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 244 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 303
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 304 DPAKRIS 310
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 142 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 172
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 23/108 (21%)
Query: 356 SFVGTHEYLAPEVI----SGQGHGSAV-------DWWTLGVFLYEMLYGTTPFKGENNEK 404
S VG Y+ PE I S + +G + D W+LG LY M YG TPF+ N+
Sbjct: 215 SQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI 274
Query: 405 TLINILKKP---LTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
+ ++ + P + FP I LQD++ L ++PK+RI
Sbjct: 275 SKLHAIIDPNHEIEFPDIPEKD---------LQDVLKCCLKRDPKQRI 313
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GIV+ DLKP N L+ DG + L DF ++
Sbjct: 172 HQHGIVHSDLKPANFLIV-DGMLKLIDFGIA 201
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 299 DPAKRIS 305
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 246 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 305
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 306 DPAKRIS 312
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 239 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 298
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 299 DPAKRIS 305
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 223 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 283 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 342
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 343 DPAKRIS 349
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 211
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
+K+FVGT Y++PE ++ + D W+LG LYE+ PF ++K L +++
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-FSQKELAGKIREG 231
Query: 414 LTFPRIGVSSSKEFEEVV 431
F RI S E E++
Sbjct: 232 -KFRRIPYRYSDELNEII 248
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 298 DPAKRIS 304
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 305 DPAKRIS 311
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 305 DPAKRIS 311
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 178 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 238 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 297
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 298 DPAKRIS 304
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 166
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
+K FVGT Y++PE ++ + D W+LG LYE+ PF ++K L +++
Sbjct: 173 AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTA-FSQKELAGKIREG 231
Query: 414 LTFPRIGVSSSKEFEEVV 431
F RI S E E++
Sbjct: 232 -KFRRIPYRYSDELNEII 248
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 305 DPAKRIS 311
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 52/127 (40%), Gaps = 33/127 (25%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
+V T Y APEVI G G+ VD W++G + EM+ F G + +I L P
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244
Query: 414 ------------------------LTFPRI------GVSSSKEFEEVVKLQDLISKLLVK 443
LTFP++ S + + +DL+SK+LV
Sbjct: 245 CPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI 304
Query: 444 NPKKRIG 450
+P KRI
Sbjct: 305 DPAKRIS 311
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLA 173
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
+V T Y APEVI G G+ VD W++G + EM+ G F G ++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
+V T Y APEVI G G+ VD W++G + EM+ G F G ++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
+V T Y APEVI G G+ VD W++G + EM+ G F G ++
Sbjct: 186 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 231
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 174
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPF 397
+F GT EY APEV+ G + G ++ W+LGV LY +++ PF
Sbjct: 188 TFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 66/179 (36%), Gaps = 31/179 (17%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
+ + LGSG G V+ + + F + V + KL + +E IL+
Sbjct: 26 YSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSR 85
Query: 146 LDHPFLPTLYAEFEASHYSCLVME-YCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXX 204
++H + + FE + LVME + G DL+A R P ++S
Sbjct: 86 VEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLAS------------ 133
Query: 205 XXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDF 263
+ + I++RD+K EN+++ ED I L DF
Sbjct: 134 ------------------YIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDF 174
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
+V T Y APEVI G G+ VD W++G + EM+ G F G ++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
+V T Y APEVI G G+ VD W++G + EM+ G F G ++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
+V T Y APEVI G G+ VD W++G + EM+ G F G ++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
+V T Y APEVI G G+ VD W++G + EM+ G F G ++
Sbjct: 185 YVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 194 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 250
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 152 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 180
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 215 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 209 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 265
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 167 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 195
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 217 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 273
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 175 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 203
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 219 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 275
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 177 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 205
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 181 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 356 SFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
S +GT Y+A EV+ G GH +D ++LG+ +E +Y PF +NILKK
Sbjct: 189 SAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIY---PFSTGXER---VNILKK-- 240
Query: 415 TFPRIGVSSSKEFEE-VVKLQDLISKLLVK-NPKKRIGS 451
+ + +F++ K++ I +LL+ +P KR G+
Sbjct: 241 -LRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGA 278
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++R+LKP N+ + E ++ + DF L+
Sbjct: 133 HSQGIIHRNLKPXNIFIDESRNVKIGDFGLA 163
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 186 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 242
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 144 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 172
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S++ + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 260 SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 316
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 218 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 246
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 37/183 (20%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
+ ++ LG G G VY + +N G A KV++ ++ ++L +E IL
Sbjct: 13 WEIVGELGDGAFGKVY--KAKNKETG---ALAAAKVIETKS---EEELEDYIVEIEILAT 64
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
DHP++ L + +++E+CPGG + A G++ +
Sbjct: 65 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEA 121
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
N+ H I++RDLK NVL+ +G I L+DF +
Sbjct: 122 -------------LNF-------------LHSKRIIHRDLKAGNVLMTLEGDIRLADFGV 155
Query: 266 SFK 268
S K
Sbjct: 156 SAK 158
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 353 RSKSFVGTHEYLAPEVISGQG-----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
+ SF+GT ++APEV+ + + D W+LG+ L EM P N + L+
Sbjct: 165 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL 224
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467
I K + P ++ SK V+ +D + L KNP+ R + ++ H F I
Sbjct: 225 KIAK---SDPPTLLTPSK---WSVEFRDFLKIALDKNPETR----PSAAQLLEHPFVSSI 274
Query: 468 N 468
Sbjct: 275 T 275
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 349 PINARSKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
P+N S V T Y AP+V+ G + + +++D W+ G L EM+ G F G N+E+ L
Sbjct: 161 PVNTFSSEVV-TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL- 218
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKL 433
L F +G + + V KL
Sbjct: 219 -----KLIFDIMGTPNESLWPSVTKL 239
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLKP+N+L+ + G + L DF L+
Sbjct: 125 HENKILHRDLKPQNLLINKRGQLKLGDFGLA 155
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 47/106 (44%), Gaps = 11/106 (10%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK- 411
+ +FVGT ++APEVI + S D W+LG+ E+ G P + + L I K
Sbjct: 176 KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKN 235
Query: 412 KPLTFPRIGVSSSKEFEEVVKLQD----------LISKLLVKNPKK 447
P T S KEF + +D L K +VKN KK
Sbjct: 236 NPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKK 281
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 67/181 (37%), Gaps = 38/181 (20%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L R+G G G V+ + Q A+K++D E + + ++ +L+
Sbjct: 25 FTKLERIGKGSFGEVF-----KGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEI--TVLSQ 77
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
D ++ Y + ++MEY GG + P F I++
Sbjct: 78 CDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIAT------------- 124
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
++ +Y H ++RD+K NVL+ E G + L+DF +
Sbjct: 125 -----MLKEILKGLDY-------------LHSEKKIHRDIKAANVLLSEQGDVKLADFGV 166
Query: 266 S 266
+
Sbjct: 167 A 167
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
V T Y APEVI G G+ VD W++G + EM+ G F G ++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDH 230
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 37/183 (20%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
+ ++ LG G G VY + +N G A KV++ ++ ++L +E IL
Sbjct: 21 WEIVGELGDGAFGKVY--KAKNKETG---ALAAAKVIETKS---EEELEDYIVEIEILAT 72
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
DHP++ L + +++E+CPGG + A G++ +
Sbjct: 73 CDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEA 129
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
N+ H I++RDLK NVL+ +G I L+DF +
Sbjct: 130 -------------LNF-------------LHSKRIIHRDLKAGNVLMTLEGDIRLADFGV 163
Query: 266 SFK 268
S K
Sbjct: 164 SAK 166
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 15/121 (12%)
Query: 353 RSKSFVGTHEYLAPEVISGQG-----HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
+ SF+GT ++APEV+ + + D W+LG+ L EM P N + L+
Sbjct: 173 KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL 232
Query: 408 NILKKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467
I K + P ++ SK V+ +D + L KNP+ R + ++ H F I
Sbjct: 233 KIAK---SDPPTLLTPSK---WSVEFRDFLKIALDKNPETR----PSAAQLLEHPFVSSI 282
Query: 468 N 468
Sbjct: 283 T 283
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 243
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 244 ---LGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 448 RI 449
RI
Sbjct: 301 RI 302
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 243
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 244 ---LGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 448 RI 449
RI
Sbjct: 301 RI 302
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVAD 175
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R + + + Y APEVI G +G +D W+LG L E+L G GE+ L +++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE- 313
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLIS 438
+G+ S K + + ++ +S
Sbjct: 314 -----LLGMPSQKLLDASKRAKNFVS 334
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 269
H I++ DLKPEN+L+++ G + D C
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
R + + + Y APEVI G +G +D W+LG L E+L G GE+ L +++
Sbjct: 255 RVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIE- 313
Query: 413 PLTFPRIGVSSSKEFEEVVKLQDLIS 438
+G+ S K + + ++ +S
Sbjct: 314 -----LLGMPSQKLLDASKRAKNFVS 334
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 269
H I++ DLKPEN+L+++ G + D C
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H GI++RDLKP NV V ED + + DF L+ + D
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD 182
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404
+A + +V T Y APE++ H VD W++G + E+L G F G +
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236
Query: 405 TLINILK 411
L I++
Sbjct: 237 QLKRIME 243
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---- 411
S V T Y APEV+ + + VD W++G EM F+G ++ L IL
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 412 -------KPLTFPRIGV--SSSKEFEEVVK-----LQDLISKLLVKNPKKRIGS 451
+ + PR S++ E+ V +DL+ K L NP KRI +
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +V+RDLKP+N+LV G I L+DF L+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---- 411
S V T Y APEV+ + + VD W++G EM F+G ++ L IL
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 412 -------KPLTFPRIGV--SSSKEFEEVVK-----LQDLISKLLVKNPKKRIGS 451
+ + PR S++ E+ V +DL+ K L NP KRI +
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +V+RDLKP+N+LV G I L+DF L+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H GI++RDLKP NV V ED + + DF L+ + D
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQAD 182
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404
+A + +V T Y APE++ H VD W++G + E+L G F G +
Sbjct: 177 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 236
Query: 405 TLINILK 411
L I++
Sbjct: 237 QLKRIME 243
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 49/114 (42%), Gaps = 18/114 (15%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK---- 411
S V T Y APEV+ + + VD W++G EM F+G ++ L IL
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 412 -------KPLTFPRIGV--SSSKEFEEVVK-----LQDLISKLLVKNPKKRIGS 451
+ + PR S++ E+ V +DL+ K L NP KRI +
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISA 291
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +V+RDLKP+N+LV G I L+DF L+
Sbjct: 137 HSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVI-SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404
+A ++ V T Y APEVI + + VD W++G + EM+ G T FKG ++
Sbjct: 174 LARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD 233
Query: 405 TLINILKKPLTFP 417
L I+K T P
Sbjct: 234 QLKEIMKVTGTPP 246
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H GI++RDLKP N+ V ED + + DF L+ + D
Sbjct: 145 HAAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD 179
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 243
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 244 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 448 RI 449
RI
Sbjct: 301 RI 302
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 247
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 248 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 448 RI 449
RI
Sbjct: 305 RI 306
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 245
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 246 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 302
Query: 448 RI 449
RI
Sbjct: 303 RI 304
Score = 28.5 bits (62), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 143 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 177
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 64/176 (36%), Gaps = 41/176 (23%)
Query: 95 GDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFLPTL 154
GD G VY Q + V A KV+D ++ ++L +E IL DHP + L
Sbjct: 21 GDFGKVYKAQNKETSV-----LAAAKVIDTKS---EEELEDYMVEIDILASCDHPNIVKL 72
Query: 155 YAEFEASHYSCLVMEYCPGG--DLYAARQRQPGKRFGISSAKXXXXXXXXXXXXXXXXXH 212
F + +++E+C GG D +P I
Sbjct: 73 LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDA------------ 120
Query: 213 TDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 268
NY H I++RDLK N+L DG I L+DF +S K
Sbjct: 121 ------LNY-------------LHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 157
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 13/102 (12%)
Query: 353 RSKSFVGTHEYLAPEVI-----SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
R SF+GT ++APEV+ + + D W+LG+ L EM P N + L+
Sbjct: 165 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLL 224
Query: 408 NILK-KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
I K +P T + SS +D + K L KN R
Sbjct: 225 KIAKSEPPTLAQPSRWSS-------NFKDFLKKCLEKNVDAR 259
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 247
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 248 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 448 RI 449
RI
Sbjct: 305 RI 306
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 200 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 256
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 158 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 186
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 189 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 245
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 147 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 175
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 263
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 264 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 320
Query: 448 RI 449
RI
Sbjct: 321 RI 322
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 161 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 195
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 195 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 251
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 252 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 308
Query: 448 RI 449
RI
Sbjct: 309 RI 310
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 243
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 244 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 448 RI 449
RI
Sbjct: 301 RI 302
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 245
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 246 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 302
Query: 448 RI 449
RI
Sbjct: 303 RI 304
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 207 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 263
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 264 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 320
Query: 448 RI 449
RI
Sbjct: 321 RI 322
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 241
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 242 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 298
Query: 448 RI 449
RI
Sbjct: 299 RI 300
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 187 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 243
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 244 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 300
Query: 448 RI 449
RI
Sbjct: 301 RI 302
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 141 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 175
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 192 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 248
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 249 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 305
Query: 448 RI 449
RI
Sbjct: 306 RI 307
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 193 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 249
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 250 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 306
Query: 448 RI 449
RI
Sbjct: 307 RI 308
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 184 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 240
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 241 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 297
Query: 448 RI 449
RI
Sbjct: 298 RI 299
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 247
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 248 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 448 RI 449
RI
Sbjct: 305 RI 306
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 182 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 238
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 140 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 168
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG-----------EN 401
+ +FVGT ++APEVI + S D W+LG+ E+ G P +N
Sbjct: 160 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 219
Query: 402 NEKTLINILKKPLT-FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKK 447
N TL KPL F ++ F K + L K +++N KK
Sbjct: 220 NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAK-ELLKHKFILRNAKK 265
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 38/181 (20%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L ++G G G V+ + Q A+K++D E + + ++ +L+
Sbjct: 9 FTKLEKIGKGSFGEVF-----KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI--TVLSQ 61
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
D P++ Y + ++MEY GG + P I++
Sbjct: 62 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---------- 111
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
++ +Y H ++RD+K NVL+ E G + L+DF +
Sbjct: 112 --------EILKGLDY-------------LHSEKKIHRDIKAANVLLSEHGEVKLADFGV 150
Query: 266 S 266
+
Sbjct: 151 A 151
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 215 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 271
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 201
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 193 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 249
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 151 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 179
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 358 VGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINIL 410
V T Y APE++ G +G AVD W +G + EM G F G+++ L +I+
Sbjct: 185 VATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIM 238
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RD+KPEN+LV + G + L DF +
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFA 171
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 43/142 (30%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y AP+V+ G + + ++VD W++G EM+ G F G ++ L P
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL------P 230
Query: 414 LTFPRIGVSSSKEFEEVVKLQ---------------------------DLISKLLVKNPK 446
F +G + +E+ +V +L DL+S +L +P
Sbjct: 231 KIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPN 290
Query: 447 KRIGSLKGSVEIKRHEFFKGIN 468
KRI + + H +FK ++
Sbjct: 291 KRISAR----DAMNHPYFKDLD 308
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLKP+N+L+ DG + L+DF L+
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 60/142 (42%), Gaps = 43/142 (30%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y AP+V+ G + + ++VD W++G EM+ G F G ++ L P
Sbjct: 177 THEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQL------P 230
Query: 414 LTFPRIGVSSSKEFEEVVKLQ---------------------------DLISKLLVKNPK 446
F +G + +E+ +V +L DL+S +L +P
Sbjct: 231 KIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPN 290
Query: 447 KRIGSLKGSVEIKRHEFFKGIN 468
KRI + + H +FK ++
Sbjct: 291 KRISAR----DAMNHPYFKDLD 308
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLKP+N+L+ DG + L+DF L+
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLA 166
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 247
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 248 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 448 RI 449
RI
Sbjct: 305 RI 306
Score = 28.5 bits (62), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 181 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 237
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 139 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 167
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
S + + Y APE+I G + S++D W+ G L E+L G F G++ L+ I+K
Sbjct: 185 SXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIK 241
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIM-LSDF 263
H GI +RD+KP+N+L+ D ++ L DF
Sbjct: 143 HSFGICHRDIKPQNLLLDPDTAVLKLCDF 171
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 13/107 (12%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG-----------EN 401
+ +FVGT ++APEVI + S D W+LG+ E+ G P +N
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 239
Query: 402 NEKTLINILKKPLT-FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKK 447
N TL KPL F ++ F K + L K +++N KK
Sbjct: 240 NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAK-ELLKHKFILRNAKK 285
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 38/181 (20%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L ++G G G V+ + Q A+K++D E + + ++ +L+
Sbjct: 29 FTKLEKIGKGSFGEVF-----KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI--TVLSQ 81
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
D P++ Y + ++MEY GG + P I++
Sbjct: 82 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---------- 131
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
++ +Y H ++RD+K NVL+ E G + L+DF +
Sbjct: 132 --------EILKGLDY-------------LHSEKKIHRDIKAANVLLSEHGEVKLADFGV 170
Query: 266 S 266
+
Sbjct: 171 A 171
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL---INILKKP 413
Y APEVI G +G +D W+LG L E+L G GE+ L I +L P
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMP 318
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKC 269
H I++ DLKPEN+L+++ G + D C
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 23/116 (19%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKK 412
+V T Y APE+ ++ +G+ ++D W++G L EML F G+ + ++ IL
Sbjct: 189 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 248
Query: 413 P-----------------LTFP-RIGVSSSKEFEEV-VKLQDLISKLLVKNPKKRI 449
P L+ P + V ++ F K DL+ K+L NP KRI
Sbjct: 249 PSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 304
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 143 HSANVLHRDLKPSNLLLNTTSDLKICDFGLARVAD 177
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 23/116 (19%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKK 412
+V T Y APE+ ++ +G+ ++D W++G L EML F G+ + ++ IL
Sbjct: 185 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 244
Query: 413 P-----------------LTFP-RIGVSSSKEFEEV-VKLQDLISKLLVKNPKKRI 449
P L+ P + V ++ F K DL+ K+L NP KRI
Sbjct: 245 PEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRI 300
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 35/122 (28%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI--- 247
Query: 416 FPRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKK 447
+G S ++ ++ L+ DL+ K+L NP K
Sbjct: 248 ---LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHK 304
Query: 448 RI 449
RI
Sbjct: 305 RI 306
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 145 HSANVLHRDLKPSNLLLNTTXDLKICDFGLARVAD 179
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H GI++RDLKP NV V ED + + DF L+ + D
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDCELRILDFGLARQAD 174
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEK 404
+A + +V T Y APE++ H VD W++G + E+L G F G +
Sbjct: 169 LARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYID 228
Query: 405 TLINILK 411
L I++
Sbjct: 229 QLKRIME 235
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
FV T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
FV T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG-----------EN 401
+ FVGT ++APEVI + S D W+LG+ E+ G P +N
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 234
Query: 402 NEKTLINILKKPLT-FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKK 447
N TL KPL F ++ F K + L K +++N KK
Sbjct: 235 NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAK-ELLKHKFILRNAKK 280
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 38/181 (20%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L ++G G G V+ + Q A+K++D E + + ++ +L+
Sbjct: 24 FTKLEKIGKGSFGEVF-----KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI--TVLSQ 76
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
D P++ Y + ++MEY GG + P I++
Sbjct: 77 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR---------- 126
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
++ +Y H ++RD+K NVL+ E G + L+DF +
Sbjct: 127 --------EILKGLDY-------------LHSEKKIHRDIKAANVLLSEHGEVKLADFGV 165
Query: 266 S 266
+
Sbjct: 166 A 166
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 42/141 (29%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y AP+V+ G + + + +D W++G EM+ GT F G + L+ I
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI---- 213
Query: 414 LTFPRIGVSSSKEFEEVVKLQ--------------------------DLISKLLVKNPKK 447
F +G +SK + V +L DL+SK+L +P +
Sbjct: 214 --FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQ 271
Query: 448 RIGSLKGSVEIKRHEFFKGIN 468
RI + K ++E H +FK N
Sbjct: 272 RI-TAKQALE---HAYFKENN 288
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G + ++DF L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 42/141 (29%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y AP+V+ G + + + +D W++G EM+ GT F G + L+ I
Sbjct: 158 THEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI---- 213
Query: 414 LTFPRIGVSSSKEFEEVVKLQ--------------------------DLISKLLVKNPKK 447
F +G +SK + V +L DL+SK+L +P +
Sbjct: 214 --FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQ 271
Query: 448 RIGSLKGSVEIKRHEFFKGIN 468
RI + K ++E H +FK N
Sbjct: 272 RI-TAKQALE---HAYFKENN 288
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G + ++DF L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
FV T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 178 FVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 238 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 454 G 454
Sbjct: 298 A 298
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 165 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 224
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 225 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 283
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 284 AALA---HPFFQDVT 295
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 35/186 (18%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V +++F+ + ++G G G VY + RN + G +++ D E + R E
Sbjct: 4 VDMENFQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRL-DTETEGVPSTAIR---EI 57
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXX 200
+L L+HP + L + LV E+ Q K+F +SA
Sbjct: 58 SLLKELNHPNIVKLLDVIHTENKLYLVFEFL----------HQDLKKFMDASA------- 100
Query: 201 XXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIML 260
+ L +Y F H +++RDLKP+N+L+ +G I L
Sbjct: 101 ---------LTGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKL 148
Query: 261 SDFDLS 266
+DF L+
Sbjct: 149 ADFGLA 154
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 13/107 (12%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKG-----------EN 401
+ FVGT ++APEVI + S D W+LG+ E+ G P +N
Sbjct: 160 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 219
Query: 402 NEKTLINILKKPLT-FPRIGVSSSKEFEEVVKLQDLISKLLVKNPKK 447
N TL KPL F ++ F K + L K +++N KK
Sbjct: 220 NPPTLEGNYSKPLKEFVEACLNKEPSFRPTAK-ELLKHKFILRNAKK 265
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/181 (19%), Positives = 67/181 (37%), Gaps = 38/181 (20%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L ++G G G V+ + Q A+K++D E + + ++ +L+
Sbjct: 9 FTKLEKIGKGSFGEVF-----KGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI--TVLSQ 61
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
D P++ Y + ++MEY GG + P I++
Sbjct: 62 CDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATI------------ 109
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
++ +Y H ++RD+K NVL+ E G + L+DF +
Sbjct: 110 ------LREILKGLDY-------------LHSEKKIHRDIKAANVLLSEHGEVKLADFGV 150
Query: 266 S 266
+
Sbjct: 151 A 151
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
+V T Y APEVI G G+ VD W++G + EM+ F G +
Sbjct: 179 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD 223
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 167
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
+V T Y APEVI G G+ VD W++G + EM+ F G +
Sbjct: 190 YVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD 234
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 178
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 220 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 278
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 279 AALA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 285
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 286 A---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 282
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 283 A---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 282
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 283 A---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 221 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 279
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 280 AALA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 220 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 278
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 279 AALA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 220 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 278
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 279 AALA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 281
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 282 A---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 284
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 285 A---HPFFQDVT 293
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
Y+APEV+ + + + D W+LGV +Y +L G PF
Sbjct: 229 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 263
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 285
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 286 A---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 282
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 283 A---HPFFQDVT 291
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 284
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 285 A---HPFFQDVT 293
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 284
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 285 A---HPFFQDVT 293
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 281
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 282 A---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 221 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 279
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 280 AALA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 282
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 283 A---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 160 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 219
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 220 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 278
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 279 AALA---HPFFQDVT 290
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 35/121 (28%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI---- 247
Query: 417 PRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKKR 448
+G S ++ ++ L+ DL+ K+L NP KR
Sbjct: 248 --LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 305
Query: 449 I 449
I
Sbjct: 306 I 306
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 145 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 179
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 51/121 (42%), Gaps = 35/121 (28%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE+ ++ +G+ ++D W++G L EML F G++ L +IL
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI---- 248
Query: 417 PRIGVSSSKEFEEVVKLQ----------------------------DLISKLLVKNPKKR 448
+G S ++ ++ L+ DL+ K+L NP KR
Sbjct: 249 --LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKR 306
Query: 449 I 449
I
Sbjct: 307 I 307
Score = 28.5 bits (62), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 146 HSANVLHRDLKPSNLLLNTTCDLKICDFGLARVAD 180
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 282
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 283 A---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 283
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 284 A---HPFFQDVT 292
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 161 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 221 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 279
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 280 AALA---HPFFQDVT 291
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 35/185 (18%)
Query: 82 GLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKV 141
G+++F+ + ++G G G VY + RN + G +++ D E + R E
Sbjct: 1 GMENFQKVEKIGEGTYGVVY--KARNKLTGEVVALKKIRL-DTETEGVPSTAIR---EIS 54
Query: 142 ILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXX 201
+L L+HP + L + LV E+ Q K+F +SA
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL----------HQDLKKFMDASA-------- 96
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
+ L +Y F H +++RDLKP+N+L+ +G I L+
Sbjct: 97 --------LTGIPLPLIKSYLFQLLQGLAFC---HSHRVLHRDLKPQNLLINTEGAIKLA 145
Query: 262 DFDLS 266
DF L+
Sbjct: 146 DFGLA 150
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
Y+APEV+ + + + D W+LGV +Y +L G PF
Sbjct: 235 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 269
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 225
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 226 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 284
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 285 A---HPFFQDVT 293
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 122 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 168 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 228 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 286
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 287 AALA---HPFFQDVT 298
Score = 35.4 bits (80), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
Y+APEV+ + + + D W+LGV +Y +L G PF
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 219
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 18/98 (18%)
Query: 352 ARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINIL 410
RSK GT Y++PE IS Q +G VD + LG+ L E+L+ T F+
Sbjct: 193 TRSK---GTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFE-----------T 238
Query: 411 KKPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
K T R G+ S F++ K + L+ KLL K P+ R
Sbjct: 239 SKFFTDLRDGIISDI-FDK--KEKTLLQKLLSKKPEDR 273
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
H +++RDLKP N+ + + + + DF L
Sbjct: 153 HSKKLIHRDLKPSNIFLVDTKQVKIGDFGL 182
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 283
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 284 A---HPFFQDVT 292
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 162 THEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 221
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 222 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 280
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 281 AALA---HPFFQDVT 292
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 283
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 284 A---HPFFQDVT 292
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------NEKTLINILKKPLTF 416
Y+APEV+ + + + D W+LGV +Y +L G PF + KT I + +
Sbjct: 190 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 249
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P E E VK+ LI LL P +R+
Sbjct: 250 PEWS-----EVSEEVKM--LIRNLLKTEPTQRM 275
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 285
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 286 A---HPFFQDVT 294
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKPEN+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------NEKTLINILKKPLTF 416
Y+APEV+ + + + D W+LGV +Y +L G PF + KT I + +
Sbjct: 189 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 248
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P E E VK+ LI LL P +R+
Sbjct: 249 PEWS-----EVSEEVKM--LIRNLLKTEPTQRM 274
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 285
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 286 A---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 285
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 286 A---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 161 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 220
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 221 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 279
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 280 AALA---HPFFQDVT 291
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 224
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 225 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 283
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 284 A---HPFFQDVT 292
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 121 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------NEKTLINILKKPLTF 416
Y+APEV+ + + + D W+LGV +Y +L G PF + KT I + +
Sbjct: 191 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 250
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P E E VK+ LI LL P +R+
Sbjct: 251 PEWS-----EVSEEVKM--LIRNLLKTEPTQRM 276
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 226
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 227 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 285
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 286 A---HPFFQDVT 294
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------NEKTLINILKKPLTF 416
Y+APEV+ + + + D W+LGV +Y +L G PF + KT I + +
Sbjct: 185 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 244
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P E E VK+ LI LL P +R+
Sbjct: 245 PEWS-----EVSEEVKM--LIRNLLKTEPTQRM 270
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------NEKTLINILKKPLTF 416
Y+APEV+ + + + D W+LGV +Y +L G PF + KT I + +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P E E VK+ LI LL P +R+
Sbjct: 243 PEWS-----EVSEEVKM--LIRNLLKTEPTQRM 268
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------NEKTLINILKKPLTF 416
Y+APEV+ + + + D W+LGV +Y +L G PF + KT I + +
Sbjct: 183 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 242
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P E E VK+ LI LL P +R+
Sbjct: 243 PEWS-----EVSEEVKM--LIRNLLKTEPTQRM 268
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 25/132 (18%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 227
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 228 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 286
Query: 457 EIKRHEFFKGIN 468
H FF+ +
Sbjct: 287 A---HPFFQDVT 295
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 124 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD------VVPKLLR-PKLSFEAIEKY 288
H I++RDLKP N+ V ED + + DF L+ D V + R P++ A+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYN 201
Query: 289 EKCSIPSCATPMQPVLS 305
+ I S M +L+
Sbjct: 202 QTVDIWSVGCIMAELLT 218
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------NEKTLINILKKPLTF 416
Y+APEV+ + + + D W+LGV +Y +L G PF + KT I + +
Sbjct: 184 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 243
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P E E VK+ LI LL P +R+
Sbjct: 244 PEWS-----EVSEEVKM--LIRNLLKTEPTQRM 269
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 30/135 (22%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y APE++ G + + +AVD W+LG EM+ F G++ L I +
Sbjct: 168 THEVVTLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 414 LTFPRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLK 453
T + GV+S ++F +VV D L+S++L +P KRI S K
Sbjct: 228 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAK 286
Query: 454 GSVEIKRHEFFKGIN 468
++ H FF+ +
Sbjct: 287 AALA---HPFFQDVT 298
Score = 35.4 bits (80), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 127 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 359 GTHEYLAPEVI----SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
G Y+APE I S QG+ D W+LG+ LYE+ G P+ N ++ + L + +
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWN---SVFDQLTQVV 243
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
+S+S+E E + ++ L K+ KR
Sbjct: 244 KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKR 277
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266
+ I++RD+KP N+L+ G+I L DF +S
Sbjct: 145 LKIIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 43/93 (46%), Gaps = 13/93 (13%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN------NEKTLINILKKPLTF 416
Y+APEV+ + + + D W+LGV +Y +L G PF + KT I + +
Sbjct: 199 YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPN 258
Query: 417 PRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRI 449
P E E VK+ LI LL P +R+
Sbjct: 259 PEWS-----EVSEEVKM--LIRNLLKTEPTQRM 284
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H IV+RDLKPEN+LV G + L+DF L+
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 22/117 (18%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK----- 412
V T Y APEV+ + + VD W++G EM F G + L I
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 413 ---------------PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKG 454
P PR S E EE L+ ++L NP KRI + +
Sbjct: 232 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEE--SGAQLLLEMLTFNPHKRISAFRA 286
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H IV+RDLKPEN+LV G + L+DF L+
Sbjct: 137 HANCIVHRDLKPENILVTSGGTVKLADFGLA 167
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 22/117 (18%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK----- 412
V T Y APEV+ + + VD W++G EM F G + L I
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 239
Query: 413 ---------------PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKG 454
P PR S E EE L+ ++L NP KRI + +
Sbjct: 240 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEE--SGAQLLLEMLTFNPHKRISAFRA 294
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLY 392
GT Y++PE IS Q +G VD + LG+ L E+L+
Sbjct: 183 GTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 216
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 454 G 454
Sbjct: 308 A 308
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 248 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 454 G 454
Sbjct: 308 A 308
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H IV+RDLKPEN+LV G + L+DF L+
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 22/117 (18%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK----- 412
V T Y APEV+ + + VD W++G EM F G + L I
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 413 ---------------PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKG 454
P PR S E EE L+ ++L NP KRI + +
Sbjct: 232 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEE--SGAQLLLEMLTFNPHKRISAFRA 286
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H IV+RDLKPEN+LV G + L+DF L+
Sbjct: 129 HANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 22/117 (18%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK----- 412
V T Y APEV+ + + VD W++G EM F G + L I
Sbjct: 172 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPP 231
Query: 413 ---------------PLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKG 454
P PR S E EE L+ ++L NP KRI + +
Sbjct: 232 EDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEE--SGAQLLLEMLTFNPHKRISAFRA 286
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFYLARHTD 176
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
+ V T Y APEVI G D W++G ++E G T F+ +N + L
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNREHL 262
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + D L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDRGLARHTD 176
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 238 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 454 G 454
Sbjct: 298 A 298
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 454 G 454
Sbjct: 309 A 309
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLKP N+ V ED + + DF L+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 192 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 251
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 252 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 311
Query: 454 G 454
Sbjct: 312 A 312
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 152 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 186
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + D L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDAGLARHTD 176
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 454 G 454
Sbjct: 309 A 309
Score = 32.7 bits (73), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLKP N+ V ED + + DF L+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 454 G 454
Sbjct: 307 A 307
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 181
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L I++ T
Sbjct: 211 YVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGT 270
Query: 416 FPRIGVS 422
P +S
Sbjct: 271 PPASVIS 277
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 171 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 205
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 454 G 454
Sbjct: 309 A 309
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLKP N+ V ED + + DF L+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLA 179
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 239 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 298
Query: 454 G 454
Sbjct: 299 A 299
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 173
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + D+ L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDYGLARHTD 176
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 454 G 454
Sbjct: 307 A 307
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 181
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 62/150 (41%), Gaps = 31/150 (20%)
Query: 356 SFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
S + + Y APE+I G + + +D W+ G + E++ G F GE+ L+ I+K
Sbjct: 200 SXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG 259
Query: 415 T-----------------FPRIGVSSSKEFEEVVKLQ------DLISKLLVKNPKKRIGS 451
T FP+I F +V + + DLIS+LL P R+
Sbjct: 260 TPSREQIKTMNPNYMEHKFPQI---RPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL-- 314
Query: 452 LKGSVEIKRHEFFKGINWALIRSIKPPEVP 481
++E H FF + R E+P
Sbjct: 315 --TAIEALCHPFFDELRTGEARMPNGRELP 342
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 181 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 240
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 241 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 300
Query: 454 G 454
Sbjct: 301 A 301
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 141 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 175
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 189 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 248
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 249 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 308
Query: 454 G 454
Sbjct: 309 A 309
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 183
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 179 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 238
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 239 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 298
Query: 454 G 454
Sbjct: 299 A 299
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 139 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 173
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 454 G 454
Sbjct: 308 A 308
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 148 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 182
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 238 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 454 G 454
Sbjct: 298 A 298
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 178 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 237
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 238 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 297
Query: 454 G 454
Sbjct: 298 A 298
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 172
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 454 G 454
Sbjct: 307 A 307
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD 181
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 454 G 454
Sbjct: 304 A 304
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 265 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 324
Query: 454 G 454
Sbjct: 325 A 325
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 454 G 454
Sbjct: 304 A 304
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
V T Y APEVI G G+ VD W++G + EM+ F G +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRD 229
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + D L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDGGLARHTD 176
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 188 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 247
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 248 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 307
Query: 454 G 454
Sbjct: 308 A 308
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 148 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD 182
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 253 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 312
Query: 454 G 454
Sbjct: 313 A 313
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 153 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 187
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + F L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILGFGLARHTD 176
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 205 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 264
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 265 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 324
Query: 454 G 454
Sbjct: 325 A 325
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 199
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 454 G 454
Sbjct: 304 A 304
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 178
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 187 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 246
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 247 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 306
Query: 454 G 454
Sbjct: 307 A 307
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD 181
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 416 -----FPRIGVSSSKEF----EEVVKLQ-------------DLISKLLVKNPKKRIGSLK 453
+I S++ + ++ K+ DL+ K+LV + KRI + +
Sbjct: 262 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 454 G 454
Sbjct: 322 A 322
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 180 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 239
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 240 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 299
Query: 454 G 454
Sbjct: 300 A 300
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 140 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 174
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 454 G 454
Sbjct: 314 A 314
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 454 G 454
Sbjct: 314 A 314
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 23/115 (20%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGE---NNEKTLINILKKP 413
V T Y APE+ ++ +G+ ++D W++G L EML F G+ + ++ IL P
Sbjct: 208 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSP 267
Query: 414 -----------------LTFP-RIGVSSSKEFEEV-VKLQDLISKLLVKNPKKRI 449
+ P + V+ +K F + K DL+ ++L NP KRI
Sbjct: 268 SQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRI 322
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H +++RDLKP N+L+ + + DF L+ D
Sbjct: 161 HSANVLHRDLKPSNLLINTTCDLKICDFGLARIAD 195
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
+ APE + + A D W GV L+EM YG P+ G N + L I K+ PR
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
+ APE + + A D W GV L+EM YG P+ G N + L I K+ PR
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
+ APE + + A D W GV L+EM YG P+ G N + L I K+ PR
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 202 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 261
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 262 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 321
Query: 454 G 454
Sbjct: 322 A 322
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 25/129 (19%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + + +AVD W+LG EM+ F G++ L I + T
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 223
Query: 417 PRI---GVSS------------SKEFEEVVKLQD-----LISKLLVKNPKKRIGSLKGSV 456
+ GV+S ++F +VV D L+S++L +P KRI S K ++
Sbjct: 224 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRI-SAKAAL 282
Query: 457 EIKRHEFFK 465
H FF+
Sbjct: 283 A---HPFFQ 288
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G I L+DF L+
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
+ V T Y PEVI G D W++G L+E G T F+ N + L+ + K
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 262
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
+ APE + + A D W GV L+EM YG P+ G N + L I K+ PR
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 184 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 243
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 244 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 303
Query: 454 G 454
Sbjct: 304 A 304
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 144 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTD 178
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 194 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 253
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 254 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 313
Query: 454 G 454
Sbjct: 314 A 314
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 154 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 188
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
+ APE + + A D W GV L+EM YG P+ G N + L I K+ PR
Sbjct: 180 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 236
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
+ APE + + A D W GV L+EM YG P+ G N + L I K+ PR
Sbjct: 190 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 246
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD 176
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Query: 416 -----FPRIGVSSSKEF----EEVVKLQ-------------DLISKLLVKNPKKRIGSLK 453
+I S++ + ++ K+ DL+ K+LV + KRI + +
Sbjct: 261 PGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 320
Query: 454 G 454
Sbjct: 321 A 321
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
+ V T Y PEVI G D W++G L+E G T F+ N + L+ + K
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 253
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
+ APE + + A D W GV L+EM YG P+ G N + L I K+ PR
Sbjct: 184 WCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR 240
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 201 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 260
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 261 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 320
Query: 454 G 454
Sbjct: 321 A 321
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 161 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 195
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 182 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 241
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 242 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 301
Query: 454 G 454
Sbjct: 302 A 302
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 20/35 (57%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD 176
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 23/121 (19%)
Query: 357 FVGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
+V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 193 YVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGT 252
Query: 416 -----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLK 453
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 253 PGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQ 312
Query: 454 G 454
Sbjct: 313 A 313
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 153 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTD 187
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
V T Y APEVI G G+ VD W++G + EM+ F G +
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRD 229
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N++V+ D + + DF L+
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
F GT Y PE IS Q H W+LG+ LY+M+ G PF+ + IL+ L
Sbjct: 198 FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELH 251
Query: 416 FP 417
FP
Sbjct: 252 FP 253
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 42/141 (29%)
Query: 360 THE-----YLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y AP+V+ G + + + +D W++G EM+ G F G + L+ I
Sbjct: 158 THEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRI---- 213
Query: 414 LTFPRIGVSSSKEFEEVVKLQ--------------------------DLISKLLVKNPKK 447
F +G +SK + V +L DL+SK+L +P +
Sbjct: 214 --FRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQ 271
Query: 448 RIGSLKGSVEIKRHEFFKGIN 468
RI + K ++E H +FK N
Sbjct: 272 RI-TAKQALE---HAYFKENN 288
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G + ++DF L+
Sbjct: 117 HDRRVLHRDLKPQNLLINREGELKIADFGLA 147
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 28/160 (17%)
Query: 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPE-VISGQGHGSAVDWWTLGVFLYEM 390
D++D + D + +A +V Y APE V+ +G VD W+ G + EM
Sbjct: 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
Query: 391 LYGTTPFKGE---NNEKTLINILKKPLTFPRIGVSS---------------SKEFEEVVK 432
F+G N ++ ++ P + SS ++ + VV
Sbjct: 228 FNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVP 287
Query: 433 LQ-----DLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467
DLI+K+L NP++RI + + RH +F+ +
Sbjct: 288 TADPVALDLIAKMLEFNPQRRISTEQA----LRHPYFESL 323
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H G+V+RDL P N+L+ ++ I + DF+L+
Sbjct: 151 HEAGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 27/56 (48%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
+ V T Y PEVI G D W++G L+E G T F+ N + L+ + K
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEK 285
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
Y +PEV+ G + A+D W+LG L EM G F G N
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
Y +PEV+ G + A+D W+LG L EM G F G N
Sbjct: 205 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 243
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
Y +PEV+ G + A+D W+LG L EM G F G N
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGAN 262
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 65/160 (40%), Gaps = 28/160 (17%)
Query: 332 GDHHDQELLDDPEVVAEPINARSKSFVGTHEYLAPE-VISGQGHGSAVDWWTLGVFLYEM 390
D++D + D + +A +V Y APE V+ +G VD W+ G + EM
Sbjct: 168 ADNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
Query: 391 LYGTTPFKGE---NNEKTLINILKKPLTFPRIGVSS---------------SKEFEEVVK 432
F+G N ++ ++ P + SS ++ + VV
Sbjct: 228 FNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVP 287
Query: 433 LQ-----DLISKLLVKNPKKRIGSLKGSVEIKRHEFFKGI 467
DLI+K+L NP++RI + + RH +F+ +
Sbjct: 288 TADPVALDLIAKMLEFNPQRRISTEQA----LRHPYFESL 323
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H G+V+RDL P N+L+ ++ I + DF+L+
Sbjct: 151 HEAGVVHRDLHPGNILLADNNDITICDFNLA 181
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
Y+APEV+ + + + D W+LGV Y +L G PF
Sbjct: 229 YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPPF 263
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 30/137 (21%)
Query: 353 RSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
R + V T Y PE++ G+ +G +D W G + EM + +P N E+ + ++
Sbjct: 184 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALIS 242
Query: 412 K------PLTFPRIGVSSSKEFEEVVKLQ------------------DLISKLLVKNPKK 447
+ P +P + E E+VK Q DLI KLLV +P +
Sbjct: 243 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 302
Query: 448 RIGSLKGSVEIKRHEFF 464
RI S + H+FF
Sbjct: 303 RI----DSDDALNHDFF 315
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RD+K NVL+ DG + L+DF L+
Sbjct: 141 HRNKILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 41/187 (21%)
Query: 84 DHFRLLRR-LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+H LL LG G NV+ + R+ G +A+KV + + + + E +
Sbjct: 8 NHLWLLSDILGQGATANVF--RGRHKKTG---DLFAIKVFNNISFLRPVDVQMREFE--V 60
Query: 143 LTMLDHPFLPTLYA--EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXX 200
L L+H + L+A E + + L+ME+CP G LY + +P +G+ ++
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLR 119
Query: 201 XXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL--VREDGHI 258
DV N+ GIV+R++KP N++ + EDG
Sbjct: 120 -------------DVVGGMNH-------------LRENGIVHRNIKPGNIMRVIGEDGQS 153
Query: 259 M--LSDF 263
+ L+DF
Sbjct: 154 VYKLTDF 160
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 17/70 (24%)
Query: 337 QELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS--------GQGHGSAVDWWTLGVFLY 388
+EL DD + V S GT EYL P++ + +G+ VD W++GV Y
Sbjct: 164 RELEDDEQFV---------SLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214
Query: 389 EMLYGTTPFK 398
G+ PF+
Sbjct: 215 HAATGSLPFR 224
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 177 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 557 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 30/137 (21%)
Query: 353 RSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
R + V T Y PE++ G+ +G +D W G + EM + +P N E+ + ++
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALIS 243
Query: 412 K------PLTFPRIGVSSSKEFEEVVKLQ------------------DLISKLLVKNPKK 447
+ P +P + E E+VK Q DLI KLLV +P +
Sbjct: 244 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 303
Query: 448 RIGSLKGSVEIKRHEFF 464
RI S + H+FF
Sbjct: 304 RI----DSDDALNHDFF 316
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RD+K NVL+ DG + L+DF L+
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 174 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 222
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 179 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 227
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 182 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 230
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 21/28 (75%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLS 266
G+++RD+KP N+L+ E G I L DF +S
Sbjct: 145 GVIHRDVKPSNILLDERGQIKLCDFGIS 172
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 333 DHHDQELLDDPEVVAEPINARSKS-FVGTHEYLAPEVI-----SGQGHGSAVDWWTLGVF 386
D Q L D + ++ ++K G Y+APE I + + D W+LG+
Sbjct: 159 DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGIS 218
Query: 387 LYEMLYGTTPFKGENNEKTLINILKK------PLTFPRIGVSSSKEFEEVVKLQDLISKL 440
L E+ G P+K N KT +L K PL +G S +F+ VK D ++K
Sbjct: 219 LVELATGQFPYK---NCKTDFEVLTKVLQEEPPLLPGHMGFSG--DFQSFVK--DCLTKD 271
Query: 441 LVKNPK 446
K PK
Sbjct: 272 HRKRPK 277
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 180 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 228
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 30/137 (21%)
Query: 353 RSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
R + V T Y PE++ G+ +G +D W G + EM + +P N E+ + ++
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALIS 243
Query: 412 K------PLTFPRIGVSSSKEFEEVVKLQ------------------DLISKLLVKNPKK 447
+ P +P + E E+VK Q DLI KLLV +P +
Sbjct: 244 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 303
Query: 448 RIGSLKGSVEIKRHEFF 464
RI S + H+FF
Sbjct: 304 RI----DSDDALNHDFF 316
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RD+K NVL+ DG + L+DF L+
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+++APE I+ + SA D W GV ++E+L +G PF+G N + I
Sbjct: 205 KWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 253
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Query: 358 VGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT- 415
V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 416 ----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLKG 454
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 302
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 176
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 2/80 (2%)
Query: 353 RSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKK 412
+ FVGT ++APEVI + D W+LG+ E+ G P + + L I K
Sbjct: 172 KRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKN 231
Query: 413 PLTFPRIGVSSSKEFEEVVK 432
+ P + SK F+E V+
Sbjct: 232 --SPPTLEGQHSKPFKEFVE 249
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/181 (19%), Positives = 69/181 (38%), Gaps = 38/181 (20%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L R+G G G VY + + A+K++D E + + ++ +L+
Sbjct: 21 FTKLDRIGKGSFGEVY-----KGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEI--TVLSQ 73
Query: 146 LDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXXXXX 205
D P++ + + S ++MEY GG + P + I++
Sbjct: 74 CDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR---------- 123
Query: 206 XXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
++ +Y H ++RD+K NVL+ E G + L+DF +
Sbjct: 124 --------EILKGLDY-------------LHSERKIHRDIKAANVLLSEQGDVKLADFGV 162
Query: 266 S 266
+
Sbjct: 163 A 163
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ E G + L+DF L+
Sbjct: 117 HRQKVLHRDLKPQNLLINERGELKLADFGLA 147
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 12/89 (13%)
Query: 352 ARSKSF--------VGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENN 402
AR+KS V T Y P+++ G + + +D W +G YEM G F G
Sbjct: 147 ARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTV 206
Query: 403 EKTL---INILKKPLTFPRIGVSSSKEFE 428
E+ L IL P G+ S++EF+
Sbjct: 207 EEQLHFIFRILGTPTEETWPGILSNEEFK 235
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H GI++RDLKP N LV +D + + DF L+ D
Sbjct: 173 HSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
+ V T Y APEVI G D W++G L E G T F ++++ L
Sbjct: 193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 264
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 58/137 (42%), Gaps = 30/137 (21%)
Query: 353 RSKSFVGTHEYLAPEVISGQ-GHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
R + V T Y PE++ G+ +G +D W G + EM + +P N E+ + ++
Sbjct: 185 RYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM-WTRSPIMQGNTEQHQLALIS 243
Query: 412 K------PLTFPRIGVSSSKEFEEVVKLQ------------------DLISKLLVKNPKK 447
+ P +P + E E+VK Q DLI KLLV +P +
Sbjct: 244 QLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ 303
Query: 448 RIGSLKGSVEIKRHEFF 464
RI S + H+FF
Sbjct: 304 RI----DSDDALNHDFF 316
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RD+K NVL+ DG + L+DF L+
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 79/187 (42%), Gaps = 41/187 (21%)
Query: 84 DHFRLLRR-LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
+H LL LG G NV+ + R+ G +A+KV + + + + E +
Sbjct: 8 NHLWLLSDILGQGATANVF--RGRHKKTG---DLFAIKVFNNISFLRPVDVQMREFE--V 60
Query: 143 LTMLDHPFLPTLYA--EFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXX 200
L L+H + L+A E + + L+ME+CP G LY + +P +G+ ++
Sbjct: 61 LKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESEFLIVLR 119
Query: 201 XXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVL--VREDGHI 258
DV N+ GIV+R++KP N++ + EDG
Sbjct: 120 -------------DVVGGMNH-------------LRENGIVHRNIKPGNIMRVIGEDGQS 153
Query: 259 M--LSDF 263
+ L+DF
Sbjct: 154 VYKLTDF 160
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 17/70 (24%)
Query: 337 QELLDDPEVVAEPINARSKSFVGTHEYLAPEVIS--------GQGHGSAVDWWTLGVFLY 388
+EL DD + V GT EYL P++ + +G+ VD W++GV Y
Sbjct: 164 RELEDDEQFVX---------LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214
Query: 389 EMLYGTTPFK 398
G+ PF+
Sbjct: 215 HAATGSLPFR 224
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Query: 358 VGTHEYLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT- 415
V T Y APE++ H VD W++G + E+L G T F G ++ L IL+ T
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 416 ----FPRIGVSSSKEFEEVVKLQ-----------------DLISKLLVKNPKKRIGSLKG 454
+I S++ + + + DL+ K+LV + KRI + +
Sbjct: 263 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQA 322
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
H I++RDLKP N+ V ED + + DF L+ D
Sbjct: 162 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTD 196
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 249
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 264
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 250
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 236
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G + L+DF L+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLADFGLA 148
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 221 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 269
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFK 398
S + T +Y APEVI G + D W+ G L E+ G+ F+
Sbjct: 218 SIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 66/179 (36%), Gaps = 37/179 (20%)
Query: 78 QGRVGLDHFRLLRRLGSGDIGNVYLCQ-IRNPMVGLPQCFYAMKVVDREALAIRKKLHRA 136
+G + + F ++R++G G G V LCQ I N + +YA+KVV R A
Sbjct: 29 KGMLLNNAFLVIRKMGDGTFGRVLLCQHIDN------KKYYAVKVVRNIKKYTRSAKIEA 82
Query: 137 DMEKVILTMLDHPFLPTLY-AEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKX 195
D+ K I + Y +F + CL+ E G LY R F I K
Sbjct: 83 DILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKL 141
Query: 196 XXXXXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVRE 254
++ NY M + + DLKPEN+L+ +
Sbjct: 142 YC---------------IEILKALNY-------------LRKMSLTHTDLKPENILLDD 172
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 249
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 188 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 236
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 216 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 264
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 249
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 250
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 237
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 250
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 201 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 249
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 222
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 222
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 202 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 250
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
Query: 356 SFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ + +
Sbjct: 171 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII-----RGQ 223
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
F R VSS + Q LI L P R
Sbjct: 224 VFFRQRVSS--------ECQHLIRWCLALRPSDR 249
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 237
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 221
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 173 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 221
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 16/94 (17%)
Query: 356 SFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ + +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII-----RGQ 220
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
F R VSS + Q LI L P R
Sbjct: 221 VFFRQRVSS--------ECQHLIRWCLALRPSDR 246
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 189 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 237
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD 147
L R LG G G V+L + N + A+K + LA RK R E +LT L
Sbjct: 19 LKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQR---EAELLTNLQ 75
Query: 148 HPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
H + Y +V EY GDL
Sbjct: 76 HEHIVKFYGVCGDGDPLIMVFEYMKHGDL 104
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 208 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 256
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 356 SFVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 168 DFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 217
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCDVVPKLLRP 278
I +RDL NVLV+ DG ++SDF LS + +L+RP
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRL-TGNRLVRP 178
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 174 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 222
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 35.8 bits (81), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 66/179 (36%), Gaps = 55/179 (30%)
Query: 236 HMMGIVYRDLKPENVLV-REDGHIMLSDFDLSFKC-DVVPKLLRPKLSFEAIEKYEKCSI 293
H GIV+RD+KP N L R L DF L+ D +LL+ ++ + E+CS
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLK---FVQSEAQQERCSQ 190
Query: 294 PSCATPMQPVLSCFSSVSHGXXXXXXAVTVTTIREQVDGDHHDQELLDDPEVVAEPINAR 353
C+ C S R+QV
Sbjct: 191 NKCSI-------CLSR-----------------RQQV----------------------- 203
Query: 354 SKSFVGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPF-KGENNEKTLINIL 410
GT + APEV++ +A+D W+ GV +L G PF K ++ L I+
Sbjct: 204 -APRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIM 261
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 196 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 244
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
SKS GT E++APEV+ + D ++ GV L+E+ P+ N
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN 243
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 357 FVGTHEYLAPEVIS-GQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
F GT Y PE I + HG + W+LG+ LY+M+ G PF E++E+ +
Sbjct: 169 FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF--EHDEEII 217
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 339 LLDDPEVV------AEPINARSKSFVGTHEYLAPEVISGQGHG---SAVDWWTLGVFLYE 389
LL +P +V + I A + FVGT ++APEVI G VD W+LG+ E
Sbjct: 147 LLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 206
Query: 390 MLYGTTPFKGENNEKTLINI 409
+ P N L +I
Sbjct: 207 LAERKPPLFNMNAMSALYHI 226
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 67/182 (36%), Gaps = 43/182 (23%)
Query: 86 FRLLRRLGSGDIGNVYLCQ-IRNP-MVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
F LR +G G G VY + +RN +V + + Y+ K + + I K++ L
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR-------FL 69
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPG--GDLYAARQRQPGKRFGISSAKXXXXXXX 201
L HP + H + LVMEYC G DL ++P + I++
Sbjct: 70 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAV-------- 120
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
H +++RD+K N+L+ E G + L
Sbjct: 121 -----------------------THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG 157
Query: 262 DF 263
DF
Sbjct: 158 DF 159
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 19/97 (19%)
Query: 360 THEYLAPEVISGQGH---GSAVDWWTLGVFLYEMLYGTTPF-----KGENNEKTLINILK 411
T Y APE+ S Q H D W+LG LY M++G P+ KG++ + N L
Sbjct: 206 TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLS 265
Query: 412 KPLTFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
P + PR L L++ ++ +P +R
Sbjct: 266 IPQS-PR----------HSSALWQLLNSMMTVDPHQR 291
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDF 263
H G +RDLKP N+L+ ++G +L D
Sbjct: 151 HAKGYAHRDLKPTNILLGDEGQPVLMDL 178
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 339 LLDDPEVV------AEPINARSKSFVGTHEYLAPEVISGQGHG---SAVDWWTLGVFLYE 389
LL +P +V + I A + FVGT ++APEVI G VD W+LG+ E
Sbjct: 186 LLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIE 245
Query: 390 MLYGTTPFKGENNEKTLINI 409
+ P N L +I
Sbjct: 246 LAERKPPLFNMNAMSALYHI 265
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 67/182 (36%), Gaps = 43/182 (23%)
Query: 86 FRLLRRLGSGDIGNVYLCQ-IRNP-MVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
F LR +G G G VY + +RN +V + + Y+ K + + I K++ L
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVR-------FL 108
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPG--GDLYAARQRQPGKRFGISSAKXXXXXXX 201
L HP + H + LVMEYC G DL ++P + I++
Sbjct: 109 QKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEV-HKKPLQEVEIAAV-------- 159
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
H +++RD+K N+L+ E G + L
Sbjct: 160 -----------------------THGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLG 196
Query: 262 DF 263
DF
Sbjct: 197 DF 198
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H M I++RDL N LVRE+ +++++DF L+
Sbjct: 125 HSMNIIHRDLNSHNCLVRENKNVVVADFGLA 155
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 28/46 (60%)
Query: 346 VAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEML 391
+ +P + + VG ++APE+I+G+ + VD ++ G+ L E++
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 358 VGTHEYLAPEVISG-QGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTF 416
V T Y APE++ G + +G VD W +G L E+L G+++ L I F
Sbjct: 173 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRI------F 226
Query: 417 PRIGVSSSKEFEEVVKLQDLIS 438
+G + +++ ++ L D ++
Sbjct: 227 ETLGTPTEEQWPDMCSLPDYVT 248
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLKP N+L+ E+G + L+DF L+
Sbjct: 129 HQHWILHRDLKPNNLLLDENGVLKLADFGLA 159
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+ APE I+ + SA D W+ GV ++E+L YG P+ N + ++
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI 409
+ APE I+ + SA D W+ GV ++E+L YG P+ N + ++
Sbjct: 220 WTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSV 267
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 88 LLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLD 147
L R LG G G V+L + N + A+K + + RK HR E +LT L
Sbjct: 17 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHR---EAELLTNLQ 73
Query: 148 HPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
H + Y +V EY GDL
Sbjct: 74 HEHIVKFYGVCVEGDPLIMVFEYMKHGDL 102
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTP-FKGENNEK----TLINILKKPLTF 416
++ PE I + + D W+LGV L+E+ YG P ++ NNE T +L++P T
Sbjct: 196 WMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTC 255
Query: 417 PR 418
P+
Sbjct: 256 PQ 257
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 12/94 (12%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINI---LKKPL 414
VGT Y APE S D + L LYE L G+ P++G+ +I + +P
Sbjct: 196 VGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVXGAHINQAIPRPS 255
Query: 415 TFPRIGVSSSKEFEEVVKLQDLISKLLVKNPKKR 448
T R G+ V +I++ KNP+ R
Sbjct: 256 TV-RPGIP--------VAFDAVIARGXAKNPEDR 280
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
+RD+KPEN+LV D L DF ++
Sbjct: 156 THRDVKPENILVSADDFAYLVDFGIA 181
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N L+ +D + + DF L+
Sbjct: 148 HESGIIHRDLKPANCLLNQDCSVKICDFGLA 178
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP+N+L+ +G + L++F L+
Sbjct: 118 HSRNVLHRDLKPQNLLINRNGELKLANFGLA 148
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 79 GRVGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADM 138
G V + LLR LG G G VY R+ + G + A+K V+ E+ ++R+++ +
Sbjct: 11 GEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNE 69
Query: 139 EKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
V+ H + L + +VME GDL
Sbjct: 70 ASVMKGFTCHHVV-RLLGVVSKGQPTLVVMELMAHGDL 106
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE + ++ D W+ GV L+E+ P++G +NE+ L
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 241
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 51/119 (42%), Gaps = 20/119 (16%)
Query: 341 DDPEVVAEPINARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKG 399
DDPE V + + APE I + SA D W+ G+ ++E M YG P+
Sbjct: 197 DDPEAVYTTTGGKIPV-----RWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWD 251
Query: 400 ENNEKTLINI-----LKKPLTFPRIGVSS------SKEFEEVVKLQDLISKL--LVKNP 445
+N+ + I L P+ P G+ KE E K + ++ L +++NP
Sbjct: 252 MSNQDVIKAIEEGYRLPAPMDCP-AGLHQLMLDCWQKERAERPKFEQIVGILDKMIRNP 309
Score = 28.9 bits (63), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266
MG V+RDL N+LV + +SDF LS
Sbjct: 164 MGYVHRDLAARNILVNSNLVCKVSDFGLS 192
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 354 SKSFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
SK GT E++APEV+ + D ++ GV L+E+ P+ N
Sbjct: 196 SKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLN 243
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 356 SFVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTL 406
+ V Y APEVI G D W++G L E G T F ++++ L
Sbjct: 193 TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 172 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 231
Query: 416 FP 417
P
Sbjct: 232 SP 233
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 125 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 155
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPRI 419
++ APE I+ D W+ G+ LYE++ YG P+ G N ++ L + PR+
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTN-ADVMTALSQGYRMPRV 233
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 10/93 (10%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVIL 143
+ +L++RLG+G G V++ N A+K + ++++ L A++ K
Sbjct: 13 ESIKLVKRLGAGQFGEVWMGYYNN------STKVAVKTLKPGTMSVQAFLEEANLMKT-- 64
Query: 144 TMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
L H L LYA ++ EY G L
Sbjct: 65 --LQHDKLVRLYAVVTREEPIYIITEYMAKGSL 95
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 416 FP 417
P
Sbjct: 244 SP 245
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 17/105 (16%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ APE I+ + SA D W+ G+ ++E M YG P+ +N+ + I L P+
Sbjct: 200 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 259
Query: 417 PRIGVSS------SKEFEEVVKLQDLISKL--LVKNPK--KRIGS 451
P I + KE + K +++ L L++NP KR GS
Sbjct: 260 P-IALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGS 303
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H GI++RDLKP N L+ +D + + DF L+
Sbjct: 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLA 176
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 52/131 (39%), Gaps = 26/131 (19%)
Query: 347 AEPINARSK--SFVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403
+EP +S FV T Y APEV ++ + A+D W+ G L E+ F G +
Sbjct: 170 SEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 404 KTLI---NILKKPLTFPRIGVSSSKEFEEVVKLQ--------------------DLISKL 440
L+ I+ P + + S E +K DL+ ++
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 441 LVKNPKKRIGS 451
LV +P KRI +
Sbjct: 290 LVFDPAKRITA 300
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP N+L+ + + + DF L+
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI---------LKK 412
+ APE I+ + SA D W+ G+ ++E M YG P+ +N+ + I +
Sbjct: 179 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 238
Query: 413 PLTFPRIGVSS-SKEFEEVVKLQDLISKL--LVKNPK--KRIGS 451
P+ ++ + KE + K +++ L L++NP KR GS
Sbjct: 239 PIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGS 282
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 15/104 (14%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI---------LKK 412
+ APE I+ + SA D W+ G+ ++E M YG P+ +N+ + I +
Sbjct: 185 WTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLPPPMDC 244
Query: 413 PLTFPRIGVSS-SKEFEEVVKLQDLISKL--LVKNPK--KRIGS 451
P+ ++ + KE + K +++ L L++NP KR GS
Sbjct: 245 PIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKRTGS 288
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 254
Query: 416 FP 417
P
Sbjct: 255 SP 256
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 148 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 178
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSL 243
Query: 416 FP 417
P
Sbjct: 244 SP 245
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 137 HAKSIIHRDLKSNNIFLHEDNTVKIGDFGLA 167
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 247
Query: 416 FP 417
P
Sbjct: 248 SP 249
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 141 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 171
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 416 FP 417
P
Sbjct: 256 SP 257
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 255
Query: 416 FP 417
P
Sbjct: 256 SP 257
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 149 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 179
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINILKKPLTFP 417
+ APE I + SA D W+ G+ ++E M YG P+ N+ +IN +++ P
Sbjct: 180 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD-VINAIEQDYRLP 234
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTL 406
+ APE IS + SA D W+ G+ ++E M YG P+ +N + +
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM 260
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINILKKPLTFP 417
+ APE I + SA D W+ G+ ++E M YG P+ N+ +IN +++ P
Sbjct: 206 WTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD-VINAIEQDYRLP 260
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 229
Query: 416 FP 417
P
Sbjct: 230 SP 231
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 123 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 416 FP 417
P
Sbjct: 228 SP 229
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 416 FP 417
P
Sbjct: 228 SP 229
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 227
Query: 416 FP 417
P
Sbjct: 228 SP 229
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 121 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 416 FP 417
P
Sbjct: 233 SP 234
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 359 GTHEYLAPEVISGQG---HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLT 415
G+ ++APEVI Q + D + G+ LYE++ G P+ NN +I ++ +
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYL 232
Query: 416 FP 417
P
Sbjct: 233 SP 234
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H I++RDLK N+ + ED + + DF L+
Sbjct: 126 HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 67/184 (36%), Gaps = 36/184 (19%)
Query: 83 LDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVI 142
++ + + ++G G G V+ C RN G Q K ++ E + KK+ A E +
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKC--RNRDTG--QIVAIKKFLESEDDPVIKKI--ALREIRM 55
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAARQRQPGKRFGISSAKXXXXXXXX 202
L L HP L L F LV EYC L+ + Q G
Sbjct: 56 LKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRG----------------- 98
Query: 203 XXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLSD 262
H ++ + H ++RD+KPEN+L+ + I L D
Sbjct: 99 ------VPEHLVKSITWQ-------TLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCD 145
Query: 263 FDLS 266
F +
Sbjct: 146 FGFA 149
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 358 VGTHEYLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
V T Y +PE++ G +G VD W +G E+L G + G+++ L I K
Sbjct: 163 VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRK 217
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL 151
LG G G V+L + N + + A+K + + + R+ R E +LTML H +
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 76
Query: 152 PTLYAEFEASHYSCLVMEYCPGGDL 176
+ +V EY GDL
Sbjct: 77 VRFFGVCTEGRPLLMVFEYMRHGDL 101
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL 151
LG G G V+L + N + + A+K + + + R+ R E +LTML H +
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 82
Query: 152 PTLYAEFEASHYSCLVMEYCPGGDL 176
+ +V EY GDL
Sbjct: 83 VRFFGVCTEGRPLLMVFEYMRHGDL 107
>pdb|4A2R|A Chain A, Structure Of The Engineered Retro-Aldolase Ra95.5-5
Length = 258
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 3/76 (3%)
Query: 385 VFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKL---QDLISKLL 441
+ ++ M + T EN K + I + ++G+S E EE+ KL LIS L
Sbjct: 177 ISIFSMNFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSL 236
Query: 442 VKNPKKRIGSLKGSVE 457
++NP+K ++GS+E
Sbjct: 237 MRNPEKIKELIEGSLE 252
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 3/85 (3%)
Query: 92 LGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTMLDHPFL 151
LG G G V+L + N + + A+K + + + R+ R E +LTML H +
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQR---EAELLTMLQHQHI 105
Query: 152 PTLYAEFEASHYSCLVMEYCPGGDL 176
+ +V EY GDL
Sbjct: 106 VRFFGVCTEGRPLLMVFEYMRHGDL 130
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
+V T Y APE+ +S + A+D W++G EML F G+N
Sbjct: 222 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 267
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP N+LV E+ + + DF ++
Sbjct: 175 HSAQVIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 363 YLAPEVISGQG-HGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILK 411
Y APE++ G + ++D W++G E++ G F GE + L+ I++
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQ 256
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 236 HMMGIVYRDLKPENVLVR-EDGHIMLSDF 263
H +GI +RD+KP+N+LV +D + L DF
Sbjct: 158 HSLGICHRDIKPQNLLVNSKDNTLKLCDF 186
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINILKKPLTFP 417
+ APE I+ + SA D W+ G+ ++E M +G P+ +N+ +IN +++ P
Sbjct: 189 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD-VINAIEQDYRLP 243
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 21/31 (67%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP N+LV E+ + + DF ++
Sbjct: 176 HSAQVIHRDLKPSNLLVNENCELKIGDFGMA 206
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 357 FVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGEN 401
+V T Y APE+ +S + A+D W++G EML F G+N
Sbjct: 223 YVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKN 268
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 358 VGTHEYLAPEVISGQGHGS---AVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPL 414
G+ ++APEVI Q + D ++ G+ LYE++ G P+ NN +I ++ +
Sbjct: 195 TGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGY 254
Query: 415 TFP 417
P
Sbjct: 255 ASP 257
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 52/131 (39%), Gaps = 26/131 (19%)
Query: 347 AEPINARS--KSFVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403
+EP +S +V T Y APEV ++ + A+D W+ G L E+ F G +
Sbjct: 170 SEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 404 KTLI---NILKKPLTFPRIGVSSSKEFEEVVKLQ--------------------DLISKL 440
L+ I+ P + + S E +K DL+ ++
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 441 LVKNPKKRIGS 451
LV +P KRI +
Sbjct: 290 LVFDPAKRITA 300
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP N+L+ + + + DF L+
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINILKKPLTFP 417
+ APE I+ + SA D W+ G+ ++E M +G P+ +N+ +IN +++ P
Sbjct: 187 WTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD-VINAIEQDYRLP 241
>pdb|4A2S|A Chain A, Structure Of The Engineered Retro-aldolase Ra95.5
Length = 258
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 383 LGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKL---QDLISK 439
+G+F M + T EN K + I + ++G+S E EE+ KL LIS
Sbjct: 177 IGIF--SMNFETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISS 234
Query: 440 LLVKNPKKRIGSLKGSVE 457
L++NP+K ++GS+E
Sbjct: 235 SLMRNPEKIKELIEGSLE 252
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 21/92 (22%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP 417
+ T EY +PEV+ G G D W+ ++E++ G F+ P
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE------------------P 237
Query: 418 RIGVSSSKEFEEVVKLQDLISKL---LVKNPK 446
G S +K+ + + ++ +L+ +L L++N K
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 269
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 42/92 (45%), Gaps = 21/92 (22%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFP 417
+ T EY +PEV+ G G D W+ ++E++ G F+ P
Sbjct: 196 IQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFE------------------P 237
Query: 418 RIGVSSSKEFEEVVKLQDLISKL---LVKNPK 446
G S +K+ + + ++ +L+ +L L++N K
Sbjct: 238 DEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 269
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 236 HMMGIVYRDLKPENVLVR-------------EDGHIMLSDFDLSFKCDVVPKLLRPKLS 281
H + I++RDLKP+N+LV E+ I++SDF L K D R L+
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 236 HMMGIVYRDLKPENVLVR-------------EDGHIMLSDFDLSFKCDVVPKLLRPKLS 281
H + I++RDLKP+N+LV E+ I++SDF L K D R L+
Sbjct: 150 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 208
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 315
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 315
>pdb|3HKM|A Chain A, Crystal Structure Of Rice(Oryza Sativa) Rrp46
pdb|3HKM|B Chain B, Crystal Structure Of Rice(Oryza Sativa) Rrp46
pdb|3HKM|C Chain C, Crystal Structure Of Rice(Oryza Sativa) Rrp46
Length = 246
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 372 QGHGSAVDWWTLGVFLYEMLYGTTPF--KGENNEKTLINILKKPLTFPRIGVSSSKEFEE 429
+ HGSA W + +YG P KGEN EK I ++ KP+T +IG KE+E
Sbjct: 26 RAHGSA-RWAQGDTIVLAAVYGPKPGTRKGENPEKASIEVVWKPMTG-QIG-KQEKEYEM 82
Query: 430 VVK 432
+K
Sbjct: 83 TLK 85
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 273
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 274 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 313
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 315
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 236 HMMGIVYRDLKPENVLVR-------------EDGHIMLSDFDLSFKCDVVPKLLRPKLS 281
H + I++RDLKP+N+LV E+ I++SDF L K D R L+
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLN 190
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 315
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 315
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS-FKCDVVPKLL 276
+ +++RD+KP NVL+ G + + DF +S + D V K +
Sbjct: 173 LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTI 212
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 236 HMMGIVYRDLKPENVLVR-------------EDGHIMLSDFDLSFKCDVVPKLLRPKLS 281
H + I++RDLKP+N+LV E+ I++SDF L K D R L+
Sbjct: 132 HSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLN 190
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L ++GSG+ G+V+ C R L C YA+K ++ LA A E +
Sbjct: 9 FHELEKIGSGEFGSVFKCVKR-----LDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAV 62
Query: 146 L-DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAA 179
L H + ++ + + + EYC GG L A
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADA 97
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 315
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 315
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L ++GSG+ G+V+ C R L C YA+K ++ LA A E +
Sbjct: 11 FHELEKIGSGEFGSVFKCVKR-----LDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAV 64
Query: 146 L-DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAA 179
L H + ++ + + + EYC GG L A
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADA 99
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 315
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266
MG V+RDL N+L+ + +SDF LS
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L ++GSG+ G+V+ C R L C YA+K ++ LA A E +
Sbjct: 11 FHELEKIGSGEFGSVFKCVKR-----LDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAV 64
Query: 146 L-DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAA 179
L H + ++ + + + EYC GG L A
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADA 99
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 42/95 (44%), Gaps = 7/95 (7%)
Query: 86 FRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILTM 145
F L ++GSG+ G+V+ C R L C YA+K ++ LA A E +
Sbjct: 13 FHELEKIGSGEFGSVFKCVKR-----LDGCIYAIK-RSKKPLAGSVDEQNALREVYAHAV 66
Query: 146 L-DHPFLPTLYAEFEASHYSCLVMEYCPGGDLYAA 179
L H + ++ + + + EYC GG L A
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADA 101
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 275
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 315
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 47/100 (47%), Gaps = 21/100 (21%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINI-----LKKPLTF 416
+ APE I+ + SA D W+ G+ ++E++ YG P+ N+ + + L P+
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQDVIKAVEEGYRLPSPMDC 252
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNP 445
P + +S +F+E+V + D L++NP
Sbjct: 253 PAALYQLMLDCWQKERNSRPKFDEIVNMLD----KLIRNP 288
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEK 404
A+ N R V + + PE+ + Q + ++D W+LG L M++ P F G++N
Sbjct: 186 AQEYNVR----VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYD 241
Query: 405 TLINILK 411
L+ I K
Sbjct: 242 QLVRIAK 248
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
GT ++APEV+ G+ + VD W+ + ML G P+
Sbjct: 253 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 291
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 204 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 263
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 264 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 303
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 32.3 bits (72), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 246
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 247 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 286
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
GT ++APEV+ G+ + VD W+ + ML G P+
Sbjct: 234 GTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHPW 272
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 25/108 (23%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYE-MLYGTTPFKGENNEKTLINI-----LKKPLTF 416
+ +PE I+ + SA D W+ G+ L+E M YG P+ +N+ + + L P+
Sbjct: 187 WTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDC 246
Query: 417 P-----------RIGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLK 453
P + ++ +FE++V + D L++NP GSLK
Sbjct: 247 PAALYQLMLDCWQKDRNNRPKFEQIVSILD----KLIRNP----GSLK 286
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V + LLR LG G G VY R+ + G + A+K V+ E+ ++R+++ +
Sbjct: 11 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEAS 69
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
V+ H + L + +VME GDL
Sbjct: 70 VMKGFTCHHVV-RLLGVVSKGQPTLVVMELMAHGDL 104
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE + ++ D W+ GV L+E+ P++G +NE+ L
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 239
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
++ APE I+ D W+ G+ L E++ YG P+ G +N + +I L++ PR
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIRALERGYRMPR 390
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Query: 347 AEPINARSKSFVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEK 404
A+ N R V + + PE+ + Q + ++D W+LG L M++ P F G++N
Sbjct: 191 AQEYNVR----VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYD 246
Query: 405 TLINILK 411
L+ I K
Sbjct: 247 QLVRIAK 253
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V + LLR LG G G VY R+ + G + A+K V+ E+ ++R+++ +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEAS 72
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
V+ H + L + +VME GDL
Sbjct: 73 VMKGFTCHHVV-RLLGVVSKGQPTLVVMELMAHGDL 107
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE + ++ D W+ GV L+E+ P++G +NE+ L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
++ APE I+ D W+ G+ L E++ YG P+ G +N + +I L++ PR
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIRALERGYRMPR 233
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V + LLR LG G G VY R+ + G + A+K V+ E+ ++R+++ +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEAS 72
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
V+ H + L + +VME GDL
Sbjct: 73 VMKGFTCHHVV-RLLGVVSKGQPTLVVMELMAHGDL 107
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE + ++ D W+ GV L+E+ P++G +NE+ L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
++ APE I+ D W+ G+ L E++ YG P+ G +N + +I L++ PR
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPE-VIRALERGYRMPR 406
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V + LLR LG G G VY R+ + G + A+K V+ E+ ++R+++ +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEAS 72
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
V+ H + L + +VME GDL
Sbjct: 73 VMKGFTCHHVV-RLLGVVSKGQPTLVVMELMAHGDL 107
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE + ++ D W+ GV L+E+ P++G +NE+ L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.3 bits (72), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 20/29 (68%)
Query: 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266
+ +++RD+KP NVL+ G + + DF +S
Sbjct: 129 LSVIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 32.0 bits (71), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V + LLR LG G G VY R+ + G + A+K V+ E+ ++R+++ +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEAS 72
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
V+ H + L + +VME GDL
Sbjct: 73 VMKGFTCHHVV-RLLGVVSKGQPTLVVMELMAHGDL 107
Score = 32.0 bits (71), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE + ++ D W+ GV L+E+ P++G +NE+ L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V + LLR LG G G VY R+ + G + A+K V+ E+ ++R+++ +
Sbjct: 14 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEAS 72
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
V+ H + L + +VME GDL
Sbjct: 73 VMKGFTCHHVV-RLLGVVSKGQPTLVVMELMAHGDL 107
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE + ++ D W+ GV L+E+ P++G +NE+ L
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 242
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 195 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 2/96 (2%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK 140
V + LLR LG G G VY R+ + G + A+K V+ E+ ++R+++ +
Sbjct: 15 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVN-ESASLRERIEFLNEAS 73
Query: 141 VILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
V+ H + L + +VME GDL
Sbjct: 74 VMKGFTCHHVV-RLLGVVSKGQPTLVVMELMAHGDL 108
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE + ++ D W+ GV L+E+ P++G +NE+ L
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVL 243
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 12/82 (14%)
Query: 360 THE-----YLAPEVISGQGH-GSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKP 413
THE Y PE++ G H ++VD W++ EML T F G++ L I
Sbjct: 195 THEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKI---- 250
Query: 414 LTFPRIGVSSSKEFEEVVKLQD 435
F +G+ + V L D
Sbjct: 251 --FEVLGLPDDTTWPGVTALPD 270
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 193 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 231
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 11/20 (55%), Positives = 17/20 (85%)
Query: 236 HMMGIVYRDLKPENVLVRED 255
H +G+VY DLKPEN+++ E+
Sbjct: 199 HSIGLVYNDLKPENIMLTEE 218
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
++++PE I+ + +A D W V ++E+L +G PF N K +I +L+K P+
Sbjct: 175 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLPK 231
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 60/172 (34%), Gaps = 37/172 (21%)
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY-AARQRQPGKRFGISSAKXXXXXXX 201
L+ ++HP + LY + CLVMEY GG LY +P + + A
Sbjct: 56 LSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-------- 105
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
++ +++RDLKP N+L+ G + L
Sbjct: 106 -----------------MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV-LK 147
Query: 262 DFDLSFKCDVVPKLLRPKLS--------FEAIEKYEKCSIPSCATPMQPVLS 305
D CD+ + K S FE EKC + S + V++
Sbjct: 148 ICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 199
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
G+ ++APEV G + D ++ G+ L+E++ PF I T P
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 225
Query: 419 IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH--EFFKGIN 468
+ + K E L+++ K+P +R S++ V+I H +F G +
Sbjct: 226 LIKNLPKPIE------SLMTRCWSKDPSQR-PSMEEIVKIMTHLMRYFPGAD 270
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
GT ++APEV+ G+ + VD W+ + ML G P+
Sbjct: 234 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 272
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 32.0 bits (71), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
++++PE I+ + +A D W V ++E+L +G PF N K +I +L+K P+
Sbjct: 191 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLPK 247
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 175 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 213
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 409
++ +PEV S + S D W+ GV ++E+ G P++ +N + + +I
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 179 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 60/172 (34%), Gaps = 37/172 (21%)
Query: 143 LTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY-AARQRQPGKRFGISSAKXXXXXXX 201
L+ ++HP + LY + CLVMEY GG LY +P + + A
Sbjct: 55 LSRVNHPNIVKLYGA--CLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHA-------- 104
Query: 202 XXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHIMLS 261
++ +++RDLKP N+L+ G + L
Sbjct: 105 -----------------MSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTV-LK 146
Query: 262 DFDLSFKCDVVPKLLRPKLS--------FEAIEKYEKCSIPSCATPMQPVLS 305
D CD+ + K S FE EKC + S + V++
Sbjct: 147 ICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVIT 198
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 49/112 (43%), Gaps = 9/112 (8%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
G+ ++APEV G + D ++ G+ L+E++ PF I T P
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPP 224
Query: 419 IGVSSSKEFEEVVKLQDLISKLLVKNPKKRIGSLKGSVEIKRH--EFFKGIN 468
+ + K E L+++ K+P +R S++ V+I H +F G +
Sbjct: 225 LIKNLPKPIE------SLMTRCWSKDPSQR-PSMEEIVKIMTHLMRYFPGAD 269
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
GT ++APEV+ G+ + VD W+ + ML G P+
Sbjct: 218 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 173 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 211
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 409
++ +PEV S + S D W+ GV ++E+ G P++ +N + + +I
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
I +RDLK +N+LV+++G ++D L+ + D
Sbjct: 134 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 165
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPLTFPR 418
++++PE I+ + +A D W V ++E+L +G PF N K +I +L+K P+
Sbjct: 179 KWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN-KDVIGVLEKGDRLPK 235
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 31.6 bits (70), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 409
++ +PEV S + S D W+ GV ++E+ G P++ +N + + +I
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLSFKCDV 271
+V+RDL NVLV+ H+ ++DF L+ D+
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLDI 171
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 359 GTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
GT ++APEV+ G+ + VD W+ + ML G P+
Sbjct: 232 GTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
I +RDLK +N+LV+++G ++D L+ + D
Sbjct: 131 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 162
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
I +RDLK +N+LV+++G ++D L+ + D
Sbjct: 129 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 160
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
I +RDLK +N+LV+++G ++D L+ + D
Sbjct: 154 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 185
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
I +RDLK +N+LV+++G ++D L+ + D
Sbjct: 128 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLI-----NILKKPLTF 416
++ PE I + + D W GV L+E+ YG P+ G +E+ + NIL P
Sbjct: 242 WMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVRDGNILACPENC 301
Query: 417 P 417
P
Sbjct: 302 P 302
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 12/98 (12%)
Query: 84 DHFRLLRRLGSGDIGNVYLCQIRNPMVGL----PQCFYAMKVVDREALA-IRKKLHRADM 138
++ +R +G G G V+ Q R P GL P A+K++ EA A ++ R
Sbjct: 47 NNIEYVRDIGEGAFGRVF--QARAP--GLLPYEPFTMVAVKMLKEEASADMQADFQR--- 99
Query: 139 EKVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDL 176
E ++ D+P + L CL+ EY GDL
Sbjct: 100 EAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 537 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 575
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 409
++ +PEV S + S D W+ GV ++E+ G P++ +N + + +I
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.6 bits (65), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 409
++ +PEV S + S D W+ GV ++E+ G P++ +N + + +I
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
++ APE I+ S D W+ GV ++E YG P++G
Sbjct: 538 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 576
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEMLY-GTTPFKGENNEKTLINI 409
++ +PEV S + S D W+ GV ++E+ G P++ +N + + +I
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.3 bits (64), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NVL+ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLA 179
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 22/32 (68%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFKCD 270
I +RDLK +N+LV+++G ++D L+ + D
Sbjct: 167 AIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 198
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKT 405
++ APE ++ + S D W+ G+ L+E G +P+ +N++T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKT 405
++ APE ++ + S D W+ G+ L+E G +P+ +N++T
Sbjct: 280 KWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQT 324
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 246
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 130 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 190 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 245
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 129 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 177
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 191 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 246
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 130 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 178
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 192 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 247
Score = 29.3 bits (64), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 131 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 179
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266
+ +++RD+KP NVL+ G + DF +S
Sbjct: 156 LSVIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 51/131 (38%), Gaps = 26/131 (19%)
Query: 347 AEPINARS--KSFVGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNE 403
+EP +S V T Y APEV ++ + A+D W+ G L E+ F G +
Sbjct: 170 SEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYR 229
Query: 404 KTLI---NILKKPLTFPRIGVSSSKEFEEVVKLQ--------------------DLISKL 440
L+ I+ P + + S E +K DL+ ++
Sbjct: 230 HQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRM 289
Query: 441 LVKNPKKRIGS 451
LV +P KRI +
Sbjct: 290 LVFDPAKRITA 300
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLS 266
H +++RDLKP N+L+ + + + DF L+
Sbjct: 129 HGSNVIHRDLKPSNLLINSNCDLKVCDFGLA 159
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE I D W+ GV L+E+ YG P+ G +N+ +
Sbjct: 213 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 257
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVV-DREALAIRKKLHRADME 139
+ L R + LG G VY + P G A+K + D+ +R++ E
Sbjct: 23 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH---E 79
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
++ L HP + L ++ YC GDL+
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 117
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLSFK 268
I +RDLK +N+LV+++G ++D L+ K
Sbjct: 162 AIAHRDLKSKNILVKKNGTCCIADLGLAVK 191
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 65/188 (34%), Gaps = 43/188 (22%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
H + + +LG G+ G+V LC+ +P+ A+K + ++ R E IL
Sbjct: 11 HLKYISQLGKGNFGSVELCRY-DPLGDNTGALVAVKQLQHSGPDQQRDFQR---EIQILK 66
Query: 145 MLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
L F+ ++ Y LVMEY P G L QR +
Sbjct: 67 ALHSDFI----VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------------ 110
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHI 258
D + Y V+RDL N+LV + H+
Sbjct: 111 --------------LDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHV 153
Query: 259 MLSDFDLS 266
++DF L+
Sbjct: 154 KIADFGLA 161
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 24/41 (58%), Gaps = 5/41 (12%)
Query: 236 HMMGIVYRDLKPENVLV---REDGHI--MLSDFDLSFKCDV 271
H + IV+RDLKP N+L+ G I M+SDF L K V
Sbjct: 135 HSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAV 175
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFK 398
++ APE I+ + S D W+ GV ++E L YG P+K
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 541
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFK 398
++ APE I+ + S D W+ GV ++E L YG P+K
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYK 215
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG L M++ P F G +N L+ I K
Sbjct: 197 VASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAK 252
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 219 FNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLV-REDGHIMLSDFDLS 266
++ RF H MGI++RD+KP NV++ E + L D+ L+
Sbjct: 136 YDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLA 184
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 363 YLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTL 406
++APE I D W+ GV L+E+ YG P+ G +N+ +
Sbjct: 196 WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVV 240
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 81 VGLDHFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVV-DREALAIRKKLHRADME 139
+ L R + LG G VY + P G A+K + D+ +R++ E
Sbjct: 6 ISLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH---E 62
Query: 140 KVILTMLDHPFLPTLYAEFEASHYSCLVMEYCPGGDLY 177
++ L HP + L ++ YC GDL+
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLH 100
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 316
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 65/188 (34%), Gaps = 43/188 (22%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
H + + +LG G+ G+V LC+ +P+ A+K + ++ R E IL
Sbjct: 12 HLKYISQLGKGNFGSVELCRY-DPLGDNTGALVAVKQLQHSGPDQQRDFQR---EIQILK 67
Query: 145 MLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
L F+ ++ Y LVMEY P G L QR +
Sbjct: 68 ALHSDFI----VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------------ 111
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHI 258
D + Y V+RDL N+LV + H+
Sbjct: 112 --------------LDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHV 154
Query: 259 MLSDFDLS 266
++DF L+
Sbjct: 155 KIADFGLA 162
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 268
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 318
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 309
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 311
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 65/188 (34%), Gaps = 43/188 (22%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
H + + +LG G+ G+V LC+ +P+ A+K + ++ R E IL
Sbjct: 24 HLKYISQLGKGNFGSVELCRY-DPLGDNTGALVAVKQLQHSGPDQQRDFQR---EIQILK 79
Query: 145 MLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
L F+ ++ Y LVMEY P G L QR +
Sbjct: 80 ALHSDFI----VKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRAR------------ 123
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHI 258
D + Y V+RDL N+LV + H+
Sbjct: 124 --------------LDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHV 166
Query: 259 MLSDFDLS 266
++DF L+
Sbjct: 167 KIADFGLA 174
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 303
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 257
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKKPL 414
+++APE I + + + D W+ GV L+E+ G +P+ G ++ + L++ +
Sbjct: 266 KWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMDEDFCSRLREGM 319
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 266
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE 262
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 65/188 (34%), Gaps = 43/188 (22%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
H + + +LG G+ G+V LC+ +P+ A+K + ++ R E IL
Sbjct: 8 HLKYISQLGKGNFGSVELCRY-DPLGDNTGALVAVKQLQHSGPDQQRDFQR---EIQILK 63
Query: 145 MLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDLYAARQRQPGKRFGISSAKXXXX 198
L F+ ++ Y LVMEY P G L QR +
Sbjct: 64 ALHSDFI----VKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR------------ 107
Query: 199 XXXXXXXXXXXXXHTDVTLFFNYRFXXXXXXXXXXXXHMMGIVYRDLKPENVLVREDGHI 258
D + Y V+RDL N+LV + H+
Sbjct: 108 --------------LDASRLLLYSSQICKGMEYLGSRR---CVHRDLAARNILVESEAHV 150
Query: 259 MLSDFDLS 266
++DF L+
Sbjct: 151 KIADFGLA 158
>pdb|4A29|A Chain A, Structure Of The Engineered Retro-Aldolase Ra95.0
Length = 258
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 392 YGTTPFKGENNEKTLINILKKPLTFPRIGVSSSKEFEEVVKL---QDLISKLLVKNPKKR 448
+ T EN K + I + ++G+S E EE+ KL LIS L++NP+K
Sbjct: 184 FETGEINKENQRKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFLISSSLMRNPEKI 243
Query: 449 IGSLKGSVE 457
++GS+E
Sbjct: 244 KELIEGSLE 252
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 370 SGQGHGSAVDWWTLGVFLYEMLYGTTPF 397
+G+ + + D W+LGV +Y +L G PF
Sbjct: 171 TGEKYDKSCDMWSLGVIMYILLCGYPPF 198
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266
M +V+RDL N+LV E + +SDF LS
Sbjct: 169 MSLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
+++APE I + D W+ G+FL+E+ G++P+ G
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 266
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKGENNEKTLINILKK 412
+++APE I + + D W+ GV L+E+ G +P+ G ++ LK+
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFXRRLKE 262
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/24 (54%), Positives = 17/24 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDF 263
I++RDLK EN+L+ G I L DF
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDF 182
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
+++APE I + D W+ G+FL+E+ G++P+ G
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 250
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
+++APE I + D W+ G+FL+E+ G++P+ G
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 268
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
+++APE I + D W+ G+FL+E+ G++P+ G
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 273
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLS 266
I +RDLK +N+LV+++G ++D L+
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLS 266
I +RDLK +N+LV+++G ++D L+
Sbjct: 162 AIAHRDLKSKNILVKKNGQCCIADLGLA 189
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 362 EYLAPEVISGQGHGSAVDWWTLGVFLYEML-YGTTPFKG 399
+++APE I + D W+ G+FL+E+ G++P+ G
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPG 273
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 20/28 (71%)
Query: 239 GIVYRDLKPENVLVREDGHIMLSDFDLS 266
I +RDLK +N+LV+++G ++D L+
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLA 160
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLA 170
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266
M +V+RDL N+LV E + +SDF LS
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 238 MGIVYRDLKPENVLVREDGHIMLSDFDLS 266
M +V+RDL N+LV E + +SDF LS
Sbjct: 169 MKLVHRDLAARNILVAEGRKMKISDFGLS 197
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLA 168
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLA 174
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLA 167
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLA 171
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLA 166
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLA 165
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 4/73 (5%)
Query: 360 THEYLAPEVI-SGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLINILKKPLTFPR 418
T Y +P ++ S + A+D W G EML G T F G + + + IL+ + P
Sbjct: 187 TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILE---SIPV 243
Query: 419 IGVSSSKEFEEVV 431
+ +E V+
Sbjct: 244 VHEEDRQELLSVI 256
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLA 198
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLA 164
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLA 161
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLA 189
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 242
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 19/27 (70%)
Query: 240 IVYRDLKPENVLVREDGHIMLSDFDLS 266
+V+RDL NVLV+ H+ ++DF L+
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLA 158
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDLSFK 268
H I +RD K +NVL++ D +L+DF L+ +
Sbjct: 140 HKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVR 172
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
H G+V+ D+KP N+ + G L DF L
Sbjct: 174 HSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 47/104 (45%), Gaps = 14/104 (13%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
H + LR+LG G+ G+V +C+ +P+ A+K + + + L + E IL
Sbjct: 14 HLKFLRQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 69
Query: 145 MLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDLYAARQR 182
L H + +++ YS L+ME+ P G L Q+
Sbjct: 70 SLQHDNI----VKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQK 109
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 241
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 358 VGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGT---TPFKGEN---NEKTLINILK 411
+ T +Y + EV+ G G+ + D W+ +E+ G P GE+ +E + +I++
Sbjct: 246 IQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHIIE 305
Query: 412 KPLTFPR 418
+ PR
Sbjct: 306 LLGSIPR 312
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 241
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 188 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 243
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 187 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 242
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 241
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 241
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
V+RDL NVLV ED +SDF L+
Sbjct: 311 VHRDLAARNVLVSEDNVAKVSDFGLT 336
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 241
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 186 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 241
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 29.6 bits (65), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 358 VGTHEYLAPEV-ISGQGHGSAVDWWTLGVFLYEMLYGTTP-FKGENNEKTLINILK 411
V + + PE+ + Q + ++D W+LG M++ P F G +N L+ I K
Sbjct: 207 VASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAK 262
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
V+RDL NVLV ED +SDF L+
Sbjct: 130 VHRDLAARNVLVSEDNVAKVSDFGLT 155
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
V+RDL NVLV ED +SDF L+
Sbjct: 139 VHRDLAARNVLVSEDNVAKVSDFGLT 164
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
V+RDL NVLV ED +SDF L+
Sbjct: 124 VHRDLAARNVLVSEDNVAKVSDFGLT 149
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 29.3 bits (64), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 18 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 71
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 72 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 107
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 42 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 95
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 96 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 131
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 236 HMMGIVYRDLKPENVLVREDGH-----IMLSDFDLS 266
H ++YRD+KPEN L+ G+ I + DF L+
Sbjct: 114 HSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 12 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 65
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 66 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 101
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 64
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 65 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 100
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
VGT Y+APE + G+ + D ++ GV L E++ G P E+ E L+
Sbjct: 189 IVGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITG-LPAVDEHREPQLL 237
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 9 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 62
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 63 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 98
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
VGT Y+APE + G+ + D ++ GV L E++ G P E+ E L+
Sbjct: 195 IVGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITG-LPAVDEHREPQLL 243
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 357 FVGTHEYLAPEVISGQGHGSAVDWWTLGVFLYEMLYGTTPFKGENNEKTLI 407
VGT Y+APE + G+ + D ++ GV L E++ G P E+ E L+
Sbjct: 195 IVGTTAYMAPEALRGEITPKS-DIYSFGVVLLEIITG-LPAVDEHREPQLL 243
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 64
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 65 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 100
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 17 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 70
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 71 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 106
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 11 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 64
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 65 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 100
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 29.3 bits (64), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
H + L++LG G+ G+V +C+ +P+ A+K + + + L + E IL
Sbjct: 10 HLKFLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 65
Query: 145 MLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L H + +++ YS L+MEY P G L
Sbjct: 66 SLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 99
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
H + L++LG G+ G+V +C+ +P+ A+K + + + L + E IL
Sbjct: 16 HLKFLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 71
Query: 145 MLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L H + +++ YS L+MEY P G L
Sbjct: 72 SLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 105
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 67
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 68 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 103
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 45/98 (45%), Gaps = 14/98 (14%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEKVILT 144
H + L++LG G+ G+V +C+ +P+ A+K + + + L + E IL
Sbjct: 14 HLKFLQQLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQH---STEEHLRDFEREIEILK 69
Query: 145 MLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L H + +++ YS L+MEY P G L
Sbjct: 70 SLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 103
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 82
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 83 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 118
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 15 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 68
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 69 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 104
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 18/100 (18%)
Query: 85 HFRLLRRLGSGDIGNVYLCQIRNPMVGLPQCFYAMKVVDREALAIRKKLHRADMEK--VI 142
H + L++LG G+ G+V +C+ P +VV + L + H D E+ I
Sbjct: 29 HLKFLQQLGKGNFGSVEMCRYD------PLQDNTGEVVAVKKLQHSTEEHLRDFEREIEI 82
Query: 143 LTMLDHPFLPTLYAEFEASHYSC------LVMEYCPGGDL 176
L L H + +++ YS L+MEY P G L
Sbjct: 83 LKSLQHDNI----VKYKGVCYSAGRRNLKLIMEYLPYGSL 118
>pdb|3NOJ|A Chain A, The Structure Of HmgCHA ALDOLASE FROM THE PROTOCATECHUATE
DEGRADATION Pathway Of Pseudomonas Putida
Length = 238
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 63 ANQAAWEAMKRLRRAQGRVGLDHFRLLRRL 92
A +A E KRLR A G +GLD +++ RL
Sbjct: 193 AERAGLEEEKRLRLAAGELGLDIYKMRERL 222
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Query: 236 HMMGIVYRDLKPENVLVREDGHIMLSDFDL 265
H GI+++DLK +NV ++G ++++DF L
Sbjct: 147 HAKGILHKDLKSKNVFY-DNGKVVITDFGL 175
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 28.9 bits (63), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
++RDL NVLV ED + ++DF L+
Sbjct: 213 IHRDLAARNVLVTEDNVMKIADFGLA 238
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
++RDL NVLV ED + ++DF L+
Sbjct: 164 IHRDLAARNVLVTEDNVMKIADFGLA 189
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
++RDL NVLV ED + ++DF L+
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
++RDL NVLV ED + ++DF L+
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
++RDL NVLV ED + ++DF L+
Sbjct: 165 IHRDLAARNVLVTEDNVMKIADFGLA 190
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 21/36 (58%), Gaps = 5/36 (13%)
Query: 236 HMMGIVYRDLKPENVLVREDGH-----IMLSDFDLS 266
H ++YRD+KPEN L+ G+ I + DF L+
Sbjct: 122 HSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
Query: 236 HMMGIVYRDLKPENVLVREDGH-----IMLSDFDLS 266
H ++YRD+KPEN LV G I + DF L+
Sbjct: 117 HTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 28.5 bits (62), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
++RDL NVLV ED + ++DF L+
Sbjct: 161 IHRDLAARNVLVTEDNVMKIADFGLA 186
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
++RDL NVLV ED + ++DF L+
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLA 197
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 28.5 bits (62), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
++RDL NVLV ED + ++DF L+
Sbjct: 157 IHRDLAARNVLVTEDNVMKIADFGLA 182
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 28.5 bits (62), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 18/26 (69%)
Query: 241 VYRDLKPENVLVREDGHIMLSDFDLS 266
++RDL NVLV ED + ++DF L+
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLA 197
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,702,024
Number of Sequences: 62578
Number of extensions: 542631
Number of successful extensions: 4131
Number of sequences better than 100.0: 939
Number of HSP's better than 100.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 156
Number of HSP's that attempted gapping in prelim test: 1503
Number of HSP's gapped (non-prelim): 2374
length of query: 517
length of database: 14,973,337
effective HSP length: 103
effective length of query: 414
effective length of database: 8,527,803
effective search space: 3530510442
effective search space used: 3530510442
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)